Citrus Sinensis ID: 040682

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210------
Protein Sequence
VCKKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNSSHSNSGTSEFCSVNDITVSLINSR
Secondary Structure (PSIPRED)
cEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEcccccccccccccccccHHHHcccccccccccEEccEEEEEEEEccccccccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccccccccEEEccccccccccccccccccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccEEEEHHHccccccHcHcccccHHHHHHHHHHHHHHHHHHHHccHccEEcccccHHHEEEcccHccHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHccccEEEEcHHcccccccHHHHHHHHHHEHEEEcccHcccccHHHHEEEccccccccccccccEEEEEEccccccccccccccccccccEEEEEEccc
Coil and Loop (DISEMBL)
VCKKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKAsnilldsgymppeyalrgffsiksdVFSFGVLMLEILSgkkstavyntgsfnllghawdlwkddrvhelidpvitqdEISLSMLMRYVKVALLCVQetvadrptmSDVVSMISNEHLNLCSLKKLAFVRsknvknsshsnsgtsefcsvnDITVSLINSR
Flexible Loop (DISEMBL)
vckklvysklldaanidkkrlldWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAFVRSKNVKnsshsnsgtsefcsvnditvslinsr
Low Complexity Region (SEG)
VCKKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAFVRsknvknsshsnsGTSEFCSVNDITVSLINSR
Disordered region (IsUnstruct)
***KLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAFVR*****************CSVNDIT*******
Disordered Region (DISOPRED)
VCKKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAFV***********************ITVSLINSR
Disordered Region (DISEMBL)
VCKKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAFVRS************TSEFCSVNDITVSLINSR
Disordered Region (DISPRO)
VCKKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAFVRSKN**************CSVNDITVSLIN**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
VCKKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNSSHSNSGTSEFCSVNDITVSLINSR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	216	2.2.26 [Sep-21-2011]
Q8RX80	659	Cysteine-rich receptor-li	yes	no	0.976	0.320	0.437	7e-47
Q9ZR08	852	G-type lectin S-receptor-	no	no	0.958	0.242	0.460	1e-45
Q9ZT07	833	G-type lectin S-receptor-	no	no	0.986	0.255	0.422	2e-45
Q9LW83	850	G-type lectin S-receptor-	no	no	0.824	0.209	0.460	6e-44
Q39086	843	Receptor-like serine/thre	no	no	0.981	0.251	0.434	8e-44
O64793	818	G-type lectin S-receptor-	no	no	0.754	0.199	0.474	1e-43
Q9SXB8	842	G-type lectin S-receptor-	no	no	0.981	0.251	0.396	2e-43
O81905	850	Receptor-like serine/thre	no	no	0.990	0.251	0.437	2e-43
Q9S972	847	Receptor-like serine/thre	no	no	0.990	0.252	0.414	5e-43
P0DH86	853	G-type lectin S-receptor-	no	no	0.902	0.228	0.434	9e-43

>sp|Q8RX80|CRK18_ARATH Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2

 Score =  187 bits (474), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/249 (43%), Positives = 144/249 (57%), Gaps = 38/249 (15%)

Query: 4   KLVYSKLLDAANID--KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL 61
           + V +K LD    D  K+  LDW +R  II GI +G+LYLHQ SRL+IIHRDLKASNILL
Sbjct: 413 EFVSNKSLDYFLFDPTKRNQLDWTMRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILL 472

Query: 62  DS-------------------------------GYMPPEYALRGFFSIKSDVFSFGVLML 90
           D+                               GYM PEY   G FS+KSDV+SFGVL+L
Sbjct: 473 DADMNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLIL 532

Query: 91  EILSGKKSTAVYNTGSF--NLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVAL 148
           EI+SGKK+++ Y       NL+ + W LW++  +HEL+DP I QD  S   ++RY+ + L
Sbjct: 533 EIISGKKNSSFYQMDGLVNNLVTYVWKLWENKSLHELLDPFINQDFTS-EEVIRYIHIGL 591

Query: 149 LCVQETVADRPTMSDVVSMISNEHLNL-CSLKKLAFVRSKNVKNSSHSNSGTSEFCSVND 207
           LCVQE  ADRPTMS +  M++N  + L   L    F R+    N   SNS  S  CSV++
Sbjct: 592 LCVQENPADRPTMSTIHQMLTNSSITLPVPLPPGFFFRNGPGSNPGQSNS-KSFACSVDE 650

Query: 208 ITVSLINSR 216
            T++ +N R
Sbjct: 651 ATITDVNPR 659

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q9ZR08|Y4230_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana GN=At4g03230 PE=3 SV=3

 Score =  182 bits (462), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/243 (46%), Positives = 145/243 (59%), Gaps = 36/243 (14%)

Query: 9   KLLDAANIDKK--RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--- 63
           K LD    D+K  + LDW++R  II GIA+GLLYLHQ SRLRIIHRDLK SNILLD    
Sbjct: 611 KSLDFFIFDRKLCQRLDWKMRCNIILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMN 670

Query: 64  ----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                                       GYM PEYAL G FS KSDVFSFGV+++E +SG
Sbjct: 671 PKISDFGLARIFGGSETSANTNRVVGTYGYMSPEYALEGLFSFKSDVFSFGVVVIETISG 730

Query: 96  KKSTAVYNT-GSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQET 154
           K++T  +    S +LLGHAWDLWK +R  EL+D  + Q+       ++ + V LLCVQE 
Sbjct: 731 KRNTGFHEPEKSLSLLGHAWDLWKAERGIELLDQAL-QESCETEGFLKCLNVGLLCVQED 789

Query: 155 VADRPTMSDVVSMI-SNEHLNLCSLKKLAFVRSKNVKNSSHSNSGTSEFCSVNDITVSLI 213
             DRPTMS+VV M+ S+E   L + K+ AFV  +   +S  S+S   E CS N++T++L 
Sbjct: 790 PNDRPTMSNVVFMLGSSEAATLPTPKQPAFVLRRCPSSSKASSSTKPETCSENELTITLE 849

Query: 214 NSR 216
           + R
Sbjct: 850 DGR 852

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3

 Score =  182 bits (462), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/251 (42%), Positives = 143/251 (56%), Gaps = 38/251 (15%)

Query: 3   KKLVYSKLLDAA------NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKA 56
           K LVY  L + +      + +++  LDW  R  I+ GIA+G+LYLHQ SRLRIIHRDLKA
Sbjct: 584 KMLVYEYLPNKSLDYFIFHEEQRAELDWPKRMEIVRGIARGILYLHQDSRLRIIHRDLKA 643

Query: 57  SNILLDS-------------------------------GYMPPEYALRGFFSIKSDVFSF 85
           SNILLDS                               GYM PEYA+ G FSIKSDV+SF
Sbjct: 644 SNILLDSEMIPKISDFGMARIFGGNQMEGCTSRVVGTFGYMAPEYAMEGQFSIKSDVYSF 703

Query: 86  GVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVK 145
           GVLMLEI++GKK++A +   S NL+GH WDLW++    E+ID ++ Q+      +M+ ++
Sbjct: 704 GVLMLEIITGKKNSAFHEESS-NLVGHIWDLWENGEATEIIDNLMDQETYDEREVMKCIQ 762

Query: 146 VALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNSSHSNSGTSEFCSV 205
           + LLCVQE  +DR  MS VV M+ +   NL + K  AF  ++     + +        SV
Sbjct: 763 IGLLCVQENASDRVDMSSVVIMLGHNATNLPNPKHPAFTSARRRGGENGACLKGQTGISV 822

Query: 206 NDITVSLINSR 216
           ND+T S I  R
Sbjct: 823 NDVTFSDIQGR 833

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LW83|CE101_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana GN=CES101 PE=2 SV=2

 Score =  177 bits (448), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 100/217 (46%), Positives = 131/217 (60%), Gaps = 39/217 (17%)

Query: 3   KKLVY----SKLLDAANID--KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKA 56
           K L+Y    +K LD    D  +K +LDW++R RI+EGI QGLLYLH+YSRL++IHRD+KA
Sbjct: 596 KMLIYEYMPNKSLDYFLFDPLRKIVLDWKLRFRIMEGIIQGLLYLHKYSRLKVIHRDIKA 655

Query: 57  SNILLDS-------------------------------GYMPPEYALRGFFSIKSDVFSF 85
            NILLD                                GYM PEY   G FS KSDVFSF
Sbjct: 656 GNILLDEDMNPKISDFGMARIFGAQESKANTKRVAGTFGYMSPEYFREGLFSAKSDVFSF 715

Query: 86  GVLMLEILSGKKSTAVYN--TGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRY 143
           GVLMLEI+ G+K+ + ++   G  NL+ H W+L+K++RV E+IDP +    +    ++R 
Sbjct: 716 GVLMLEIICGRKNNSFHHDSEGPLNLIVHVWNLFKENRVREVIDPSLGDSAVENPQVLRC 775

Query: 144 VKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKK 180
           V+VALLCVQ+   DRP+M DVVSMI  +  N  SL K
Sbjct: 776 VQVALLCVQQNADDRPSMLDVVSMIYGDGNNALSLPK 812

Promotes the expression of genes involved in photosynthesis at least in dedifferentiated calli.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1

 Score =  176 bits (447), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/258 (43%), Positives = 145/258 (56%), Gaps = 46/258 (17%)

Query: 3   KKLVYSKL----LDAANIDKKRL--LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKA 56
           K L+Y  L    LD+   D+ R   L+WQ R  II GIA+GLLYLHQ SR RIIHRDLKA
Sbjct: 588 KMLIYEYLENLSLDSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKA 647

Query: 57  SNILLDS-------------------------------GYMPPEYALRGFFSIKSDVFSF 85
           SN+LLD                                GYM PEYA+ G FS+KSDVFSF
Sbjct: 648 SNVLLDKNMTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSF 707

Query: 86  GVLMLEILSGKKSTAVYNTG-SFNLLGHAWDLWKDDRVHELIDPVITQDEISLSM----L 140
           GVL+LEI+SGK++   YN+    NLLG  W  WK+    E++DP I  D +S       +
Sbjct: 708 GVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGNELEIVDP-INIDSLSSKFPTHEI 766

Query: 141 MRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAFV--RSKNVKNSSHSNSG 198
           +R +++ LLCVQE   DRP MS V+ M+ +E   +   K+  F   RS    +SS S   
Sbjct: 767 LRCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFCIGRSPLEADSSSSTQR 826

Query: 199 TSEFCSVNDITVSLINSR 216
             E C+VN IT+S+I++R
Sbjct: 827 DDE-CTVNQITLSVIDAR 843

Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64793|Y1675_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 OS=Arabidopsis thaliana GN=At1g67520 PE=2 SV=3

 Score =  176 bits (446), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 93/196 (47%), Positives = 121/196 (61%), Gaps = 33/196 (16%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------- 63
           +K +LDW +R RI+EGI QGLLYLH+YSRL++IHRD+KASNILLD               
Sbjct: 586 RKNVLDWTLRFRIMEGIIQGLLYLHKYSRLKVIHRDIKASNILLDEDMNPKISDFGLARI 645

Query: 64  -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN--T 104
                            GYM PEY   G FS KSDVFSFGVLMLEI+ G+K+ + ++   
Sbjct: 646 FGAEETRANTKRVAGTFGYMSPEYFREGLFSAKSDVFSFGVLMLEIICGRKNNSFHHDLE 705

Query: 105 GSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDV 164
           G  NL+ H W+L+K++++ E+ID  +    +    ++R V+VALLCVQE   DRP+M DV
Sbjct: 706 GPLNLIVHVWNLFKENKIREVIDLSLRDSALDYPQVLRCVQVALLCVQENAEDRPSMLDV 765

Query: 165 VSMISNEHLNLCSLKK 180
           VSMI  E  N  SL K
Sbjct: 766 VSMIYGEGNNALSLPK 781

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3

 Score =  176 bits (445), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/252 (39%), Positives = 146/252 (57%), Gaps = 40/252 (15%)

Query: 3   KKLVYS----KLLDAANID--KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKA 56
           + LVY     K LDA   D  K+++LDW+ R  I+EGI +GLLYLH+ SRL+IIHRDLKA
Sbjct: 593 RMLVYEYMPKKSLDAYLFDPMKQKILDWKTRFNIMEGICRGLLYLHRDSRLKIIHRDLKA 652

Query: 57  SNILLDS-------------------------------GYMPPEYALRGFFSIKSDVFSF 85
           SNILLD                                GYM PEYA+ GFFS KSDVFS 
Sbjct: 653 SNILLDENLNPKISDFGLARIFRANEDEANTRRVVGTYGYMSPEYAMEGFFSEKSDVFSL 712

Query: 86  GVLMLEILSGKKSTAVY-NTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYV 144
           GV+ LEI+SG+++++ +    + NLL +AW LW D     L DP +  D+     + + V
Sbjct: 713 GVIFLEIISGRRNSSSHKEENNLNLLAYAWKLWNDGEAASLADPAVF-DKCFEKEIEKCV 771

Query: 145 KVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNSSHSNSGTSEFCS 204
            + LLCVQE   DRP +S+V+ M++ E+++L   K+ AF+  +    +  S+  +S+  S
Sbjct: 772 HIGLLCVQEVANDRPNVSNVIWMLTTENMSLADPKQPAFIVRRGASEAESSDQ-SSQKVS 830

Query: 205 VNDITVSLINSR 216
           +ND++++ +  R
Sbjct: 831 INDVSLTAVTGR 842

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1

 Score =  175 bits (444), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/256 (43%), Positives = 145/256 (56%), Gaps = 42/256 (16%)

Query: 3   KKLVYSKL----LDAANIDKKR--LLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKA 56
           K L+Y  L    LD+   DK R   L+WQ+R  II GIA+GLLYLHQ SR RIIHRDLKA
Sbjct: 595 KMLIYEYLENLSLDSHLFDKSRNSKLNWQMRFDIINGIARGLLYLHQDSRFRIIHRDLKA 654

Query: 57  SNILLDS-------------------------------GYMPPEYALRGFFSIKSDVFSF 85
           SNILLD                                GYM PEYA+ G FS+KSDVFSF
Sbjct: 655 SNILLDKYMTPKISDFGMARIFGRDETEANTRKVVGTYGYMSPEYAMDGIFSMKSDVFSF 714

Query: 86  GVLMLEILSGKKSTAVYNTG-SFNLLGHAWDLWKDDRVHELIDPVITQDEISLSM--LMR 142
           GVL+LEI+S K++   YN+    NLLG  W  WK+ +  E+IDP+IT    +     ++R
Sbjct: 715 GVLLLEIISSKRNKGFYNSDRDLNLLGCVWRNWKEGKGLEIIDPIITDSSSTFRQHEILR 774

Query: 143 YVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAFV--RSKNVKNSSHSNSGTS 200
            +++ LLCVQE   DRPTMS V+ M+ +E   +   K   +   RS    +SS S     
Sbjct: 775 CIQIGLLCVQERAEDRPTMSLVILMLGSESTTIPQPKAPGYCLERSLLDTDSSSSKQRDD 834

Query: 201 EFCSVNDITVSLINSR 216
           E  +VN ITVS++++R
Sbjct: 835 ESWTVNQITVSVLDAR 850

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2

 Score =  174 bits (440), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/256 (41%), Positives = 146/256 (57%), Gaps = 42/256 (16%)

Query: 3   KKLVYSKL----LDAANIDKKRL--LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKA 56
           K L+Y  L    LD+   D+ R   L+WQ R  II GIA+GLLYLHQ SR RIIHRDLKA
Sbjct: 592 KMLIYEYLENLSLDSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKA 651

Query: 57  SNILLDS-------------------------------GYMPPEYALRGFFSIKSDVFSF 85
           SN+LLD                                GYM PEYA+ G FS+KSDVFSF
Sbjct: 652 SNVLLDKNMTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSF 711

Query: 86  GVLMLEILSGKKSTAVYNTG-SFNLLGHAWDLWKDDRVHELIDPV---ITQDEISLSMLM 141
           GVL+LEI+SGK++   YN+    NLLG  W  WK+ +  E++DP+       E     ++
Sbjct: 712 GVLLLEIISGKRNKGFYNSNRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEIL 771

Query: 142 RYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAF-VRSKNVKNSSHSNSGTS 200
           R +++ LLCVQE   DRP MS V+ M+ +E   +   K+  F V   +++  S S++   
Sbjct: 772 RCIQIGLLCVQERAEDRPVMSSVMVMLGSETTAIPQPKRPGFCVGRSSLEVDSSSSTQRD 831

Query: 201 EFCSVNDITVSLINSR 216
           + C+VN +T+S+I++R
Sbjct: 832 DECTVNQVTLSVIDAR 847

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1

 Score =  173 bits (438), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 141/235 (60%), Gaps = 40/235 (17%)

Query: 22  LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------ 63
           L+WQ R  II GIA+GLLYLHQ SR +IIHRDLKASN+LLD                   
Sbjct: 619 LNWQTRFSIINGIARGLLYLHQDSRFKIIHRDLKASNVLLDKNMTPKISDFGMARIFERD 678

Query: 64  -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGS-FNL 109
                        GYM PEYA+ G FS+KSDVFSFGVL+LEI+SGK++   +N+G   NL
Sbjct: 679 ETEANTRKVVGTYGYMSPEYAMEGIFSVKSDVFSFGVLVLEIVSGKRNRGFHNSGQDNNL 738

Query: 110 LGHAWDLWKDDRVHELIDPVITQDEISLSML-----MRYVKVALLCVQETVADRPTMSDV 164
           LG+ W+ WK+ +  E++D +I     S+S+      +R +++ LLCVQE   DRP MS V
Sbjct: 739 LGYTWENWKEGKGLEIVDSIIVDSSSSMSLFQPHEVLRCIQIGLLCVQERAEDRPKMSSV 798

Query: 165 VSMISNEHLNLCSLKKLAFVRSKNVKNSSHSNSGT---SEFCSVNDITVSLINSR 216
           V M+ +E   +   K+  +   ++  +++ S+S T   SE  +VN ITVS+IN+R
Sbjct: 799 VLMLGSEKGEIPQPKRPGYCVGRSSLDTADSSSSTKRDSESLTVNQITVSVINAR 853

Female specificity determinant of self-incompatibility.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
224106535	333	predicted protein [Populus trichocarpa]	0.935	0.606	0.521	2e-60
224138268	818	predicted protein [Populus trichocarpa]	0.935	0.246	0.525	4e-60
302143114	457	unnamed protein product [Vitis vinifera]	0.925	0.437	0.537	1e-59
302143125	585	unnamed protein product [Vitis vinifera]	0.925	0.341	0.542	2e-59
302143119	547	unnamed protein product [Vitis vinifera]	0.925	0.365	0.518	5e-59
359493703	1658	PREDICTED: uncharacterized protein LOC10	0.925	0.120	0.537	7e-59
302143124	233	unnamed protein product [Vitis vinifera]	0.902	0.836	0.523	1e-58
224106539	846	predicted protein [Populus trichocarpa]	0.925	0.236	0.508	2e-58
147768020	2026	hypothetical protein VITISV_021034 [Viti	0.925	0.098	0.533	3e-58
359493705	830	PREDICTED: receptor-like serine/threonin	0.902	0.234	0.528	3e-58

>gi|224106535|ref|XP_002333668.1| predicted protein [Populus trichocarpa] gi|222837959|gb|EEE76324.1| predicted protein [Populus trichocarpa]

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/238 (52%), Positives = 158/238 (66%), Gaps = 36/238 (15%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
           L DA   ++ ++LDW  R RIIEGIAQGLLYLH+YSRLRIIHRDLK SNILLDS      
Sbjct: 101 LFDA---NRGQILDWGTRIRIIEGIAQGLLYLHRYSRLRIIHRDLKPSNILLDSEMNPKI 157

Query: 64  -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS 98
                                    GYM PEYA+ G FSIKSDVFSFGVL+LEI+SGKK+
Sbjct: 158 SDFGMARIFGGNETQANTNRIVGTYGYMSPEYAMEGLFSIKSDVFSFGVLVLEIVSGKKN 217

Query: 99  TAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADR 158
           T+ Y++GS NLLGHAW LW  ++  +L+DP++  D  S + L+RY+ + LLCVQE+ ADR
Sbjct: 218 TSFYHSGSLNLLGHAWKLWNSNKALDLMDPILG-DPPSTATLLRYINIGLLCVQESPADR 276

Query: 159 PTMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNSSHSNSGTSEFCSVNDITVSLINSR 216
           PTMSDV+SMI NEH+ L   K+ AFV  +NV     S    +   SVN++T++ I++R
Sbjct: 277 PTMSDVISMIVNEHVALPEPKQPAFVAGRNVA-EPRSLMSFAGVPSVNNVTITTIDAR 333

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138268|ref|XP_002326560.1| predicted protein [Populus trichocarpa] gi|222833882|gb|EEE72359.1| predicted protein [Populus trichocarpa]

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/238 (52%), Positives = 160/238 (67%), Gaps = 36/238 (15%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
           L DA   +K+++LDW  R RIIEGIAQGLLYLH+YSRLRIIHRDLK SNILLDS      
Sbjct: 586 LFDA---NKRQILDWGSRVRIIEGIAQGLLYLHRYSRLRIIHRDLKPSNILLDSEMNPKI 642

Query: 64  -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS 98
                                    GYM PEYA+ G FSIKSDVFSFGVL+LEI+SG+K+
Sbjct: 643 SDFGMARIFGDSETEANTKKIAGTYGYMSPEYAMDGLFSIKSDVFSFGVLLLEIVSGRKN 702

Query: 99  TAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADR 158
           T  Y+  S NLLGHAW  W   R  +L+DPV+  D  S S+L+R++ + LLCVQE+ ADR
Sbjct: 703 TGFYHRDSLNLLGHAWKSWNSSRALDLMDPVLG-DPPSTSVLLRHINIGLLCVQESPADR 761

Query: 159 PTMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNSSHSNSGTSEFCSVNDITVSLINSR 216
           PTMSDV SMI NEH  L + K+ AF   +N+ ++S S S ++ F SVN++TV+++++R
Sbjct: 762 PTMSDVFSMIVNEHAPLPAPKQPAFATGRNMGDTSSSTS-SAGFPSVNNVTVTMMDAR 818

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143114|emb|CBI20409.3| unnamed protein product [Vitis vinifera]

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/238 (53%), Positives = 160/238 (67%), Gaps = 38/238 (15%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
           L D A   K+ +L+W++R RIIEG+AQGLLYLHQYSRLR+IHRDLKASNILLD       
Sbjct: 227 LFDPA---KRGILNWEMRVRIIEGVAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI 283

Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST 99
                                   GYM PEY LRG FS KSDVFSFGVL+LEILSGKK T
Sbjct: 284 SDFGMARIFGGNESKATKHIVGTYGYMSPEYVLRGLFSTKSDVFSFGVLLLEILSGKKIT 343

Query: 100 AVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLM-RYVKVALLCVQETVADR 158
             Y++GS NLLG+AWDLWK+++  ELIDPV+  +EISL  +M RY+ VALLCVQE+  DR
Sbjct: 344 EFYHSGSLNLLGYAWDLWKNNKGQELIDPVL--NEISLRHIMLRYINVALLCVQESADDR 401

Query: 159 PTMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNSSHSNSGTSEFCSVNDITVSLINSR 216
           PTM DVVSM+  E++ L S  + AF    ++K   H++    E CS+ND+T+S + +R
Sbjct: 402 PTMFDVVSMLVKENVLLSSPNEPAFSNLSSMK--PHASQDRLEICSLNDVTLSSMGAR 457

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143125|emb|CBI20420.3| unnamed protein product [Vitis vinifera]

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/238 (54%), Positives = 157/238 (65%), Gaps = 38/238 (15%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
           L D A   K+ +L+W+ R RIIEG+AQGLLYLHQYSRLR+IHRDLKASNILLD       
Sbjct: 355 LFDPA---KRGILNWETRVRIIEGVAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI 411

Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST 99
                                   GYM PEY LRG FS KSDVFSFGVL+LEILSGKK T
Sbjct: 412 SDFGMARIFGGNESKATKHIVGTYGYMSPEYVLRGLFSTKSDVFSFGVLLLEILSGKKIT 471

Query: 100 AVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEI-SLSMLMRYVKVALLCVQETVADR 158
             Y++ S NLLG+AWDLWK++R  ELIDPV   +EI S  +L+RY+ VALLCVQE   DR
Sbjct: 472 EFYHSDSLNLLGYAWDLWKNNRGQELIDPV--PNEISSRHILLRYINVALLCVQENADDR 529

Query: 159 PTMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNSSHSNSGTSEFCSVNDITVSLINSR 216
           PTMSDVVSM+  E++ L S  + AF   + VK   H++    E CS+ND+T+S + +R
Sbjct: 530 PTMSDVVSMLGRENVLLSSPNEPAFSYLRGVK--PHASQERPEICSLNDVTLSSMGAR 585

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143119|emb|CBI20414.3| unnamed protein product [Vitis vinifera]

 Score =  233 bits (593), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 124/239 (51%), Positives = 156/239 (65%), Gaps = 39/239 (16%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
           L D+AN     +L+W+ R  IIEG+AQGLLYLHQYSRLRIIHRDLKASNILLD       
Sbjct: 316 LFDSAN---HGILNWETRVHIIEGVAQGLLYLHQYSRLRIIHRDLKASNILLDKDLNPKI 372

Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST 99
                                   GYM PEYAL G FS KSDVFSFGVL+LEILSGKK+T
Sbjct: 373 SDFGMARIFGSNESKATNHIVGTYGYMSPEYALEGLFSTKSDVFSFGVLLLEILSGKKNT 432

Query: 100 AVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRP 159
             Y + S NLLG+AWDLWKD R  EL+DPV+ ++ +   +L++Y+ + LLCVQE+  DRP
Sbjct: 433 GFYQSDSLNLLGYAWDLWKDSRGQELMDPVL-EEALPRHILLKYINIGLLCVQESADDRP 491

Query: 160 TMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNS--SHSNSGTSEFCSVNDITVSLINSR 216
           TMSDVVSM+ NE L+L S K+ AF    N+++    H      E CS+N +T+S++ +R
Sbjct: 492 TMSDVVSMLGNESLHLPSPKQPAF---SNLRSGVEPHIFQNRPEMCSLNSVTLSIMEAR 547

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493703|ref|XP_002281224.2| PREDICTED: uncharacterized protein LOC100245158 [Vitis vinifera]

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 128/238 (53%), Positives = 159/238 (66%), Gaps = 38/238 (15%)

Query: 10   LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
            L D A   K+ +L+W+ R  IIEG+AQGLLYLHQYSRLR+IHRDLKASNILLD       
Sbjct: 1428 LFDPA---KRGILNWETRVHIIEGVAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI 1484

Query: 64   ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST 99
                                    GYM PEY LRG FS KSDVFSFGVL+LEILSGKK T
Sbjct: 1485 SDFGMARIFGGNESKATKHIVGTYGYMSPEYVLRGLFSTKSDVFSFGVLLLEILSGKKIT 1544

Query: 100  AVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLS-MLMRYVKVALLCVQETVADR 158
              Y++ S NLLG+AWDLWK +R  ELIDPV+  +EISL  +L+RY+ VALLCVQE+  DR
Sbjct: 1545 EFYHSDSLNLLGYAWDLWKSNRGQELIDPVL--NEISLRHILLRYINVALLCVQESADDR 1602

Query: 159  PTMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNSSHSNSGTSEFCSVNDITVSLINSR 216
            PTMSDVVSM+  E++ L S  + AF+   ++K   H++    E CS+ND+T+S + +R
Sbjct: 1603 PTMSDVVSMLVKENVLLSSPNEPAFLNLSSMK--PHASQDRLEICSLNDVTLSSMGAR 1658

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143124|emb|CBI20419.3| unnamed protein product [Vitis vinifera]

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 121/231 (52%), Positives = 150/231 (64%), Gaps = 36/231 (15%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------- 63
           K  +L+W+ R  IIEG+AQGLLYLHQYSRLRIIHRDLKASNILLD               
Sbjct: 7   KHGILNWKTRVHIIEGVAQGLLYLHQYSRLRIIHRDLKASNILLDKDMNPKISDFGMARI 66

Query: 64  ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF 107
                           GYM PEYAL G FS KSDVFSFGVL+LEILSGKK+T  Y T S 
Sbjct: 67  FGGNESKATNHIVGTYGYMSPEYALEGLFSTKSDVFSFGVLLLEILSGKKNTGFYQTDSL 126

Query: 108 NLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM 167
           NLLG+ WDLWKD R  EL+DP + ++ +   +L+RY+ V LLCVQE+  DRPTMSDVVSM
Sbjct: 127 NLLGYVWDLWKDSRGQELMDPGL-EETLPTHILLRYINVGLLCVQESADDRPTMSDVVSM 185

Query: 168 ISNEHLNLCSLKKLAFVRSKNVKNS--SHSNSGTSEFCSVNDITVSLINSR 216
           + NE + L S K+ AF    N+++    H +    E CS+N +T+S++ +R
Sbjct: 186 LGNESVRLPSPKQPAF---SNLRSGVEPHISQNRPEVCSLNGVTLSVMEAR 233

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106539|ref|XP_002333669.1| predicted protein [Populus trichocarpa] gi|222837960|gb|EEE76325.1| predicted protein [Populus trichocarpa]

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 122/240 (50%), Positives = 159/240 (66%), Gaps = 40/240 (16%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
           L DA   ++ ++LDW  R RIIEGIAQGLLYLH+YSRLRIIHRDLK SNILLDS      
Sbjct: 614 LFDA---NRGQILDWGTRIRIIEGIAQGLLYLHRYSRLRIIHRDLKPSNILLDSEMNPKI 670

Query: 64  -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS 98
                                    GYM PEYA+ G FSIKSDVFSFGVL+LEI+SGKK+
Sbjct: 671 SDFGMARIFGGNETQAHTNRIVGTYGYMSPEYAMEGLFSIKSDVFSFGVLVLEIVSGKKN 730

Query: 99  TAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADR 158
           T+ Y++ + +LLGHAW LW  ++  +L+DP++  D  S + L+RY+ + LLCVQE+ ADR
Sbjct: 731 TSFYHSDTLHLLGHAWKLWNSNKALDLMDPILG-DPPSTATLLRYINIGLLCVQESPADR 789

Query: 159 PTMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNSSH--SNSGTSEFCSVNDITVSLINSR 216
           PTMSDV+SMI+NEH+ L   K+ AFV  +N+       S+SG     SVN++T++ I+ R
Sbjct: 790 PTMSDVISMIANEHVALPEPKQPAFVACRNMAEQGPLMSSSGVP---SVNNMTITAIDGR 846

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147768020|emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 127/238 (53%), Positives = 157/238 (65%), Gaps = 38/238 (15%)

Query: 10   LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
            L D A   K  +L+W+ R RIIEG+AQGLLYLHQYSRLR+IHRDLKASNILLD       
Sbjct: 1796 LFDPA---KXGILNWEXRVRIIEGVAQGLLYLHQYSRLRVIHRDLKASNILLDKDMNPKI 1852

Query: 64   ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST 99
                                    GYM PEY LRG FS KSDVFSFGVL+LEILSGKK T
Sbjct: 1853 SDFGMARIFGGNESKATKHIVGTYGYMSPEYVLRGLFSTKSDVFSFGVLLLEILSGKKIT 1912

Query: 100  AVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLM-RYVKVALLCVQETVADR 158
              Y++ S NLLG+AWDLWK+++  ELIDPV+  +EISL  +M RY+ VALLCVQE+  DR
Sbjct: 1913 EFYHSXSLNLLGYAWDLWKNNKGQELIDPVL--NEISLRHIMLRYINVALLCVQESADDR 1970

Query: 159  PTMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNSSHSNSGTSEFCSVNDITVSLINSR 216
            PTM DVVSM+  E++ L S  + AF    ++K   H++    E CS+ND+T+S + +R
Sbjct: 1971 PTMFDVVSMLVKENVLLSSPNEPAFSNLSSMK--PHASQDRLEICSLNDVTLSSMGAR 2026

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493705|ref|XP_003634654.1| PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Vitis vinifera]

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/231 (52%), Positives = 151/231 (65%), Gaps = 36/231 (15%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------- 63
           K  +L+W+ R  IIEG+AQGLLYLHQYSRLRIIHRDLKASNILLD               
Sbjct: 604 KHGILNWKTRVHIIEGVAQGLLYLHQYSRLRIIHRDLKASNILLDKDMNPKISDFGMARI 663

Query: 64  ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF 107
                           GYM PEYAL G FS KSDVFSFGVL+LEILSGKK+T  Y T S 
Sbjct: 664 FGGNESKVTNHIVGTYGYMSPEYALEGLFSTKSDVFSFGVLLLEILSGKKNTGFYQTDSL 723

Query: 108 NLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM 167
           NLLG+AWDLWKD R  EL+DP + ++ +   +L+RY+ V LLCVQE+  DRPTMSDVVSM
Sbjct: 724 NLLGYAWDLWKDSRGLELMDPGL-EETLPTHILLRYINVGLLCVQESADDRPTMSDVVSM 782

Query: 168 ISNEHLNLCSLKKLAFVRSKNVKNS--SHSNSGTSEFCSVNDITVSLINSR 216
           + NE + L S K+ AF    N+++    H +    E CS+N +T+S++ +R
Sbjct: 783 LGNESVRLPSPKQPAF---SNLRSGVEPHISQNRPEVCSLNGVTLSVMEAR 830

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
TAIR|locus:2093397	850	CES101 "CALLUS EXPRESSION OF R	0.708	0.18	0.433	2.3e-42
UNIPROTKB|O49974	848	KIK1 "Serine/threonine-protein	0.513	0.130	0.460	6.2e-41
TAIR|locus:2200151	830	SD1-13 "S-domain-1 13" [Arabid	0.694	0.180	0.412	3.9e-40
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.518	0.143	0.486	8.2e-40
TAIR|locus:2121676	669	CRK10 "cysteine-rich RLK (RECE	0.546	0.176	0.475	1e-39
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.703	0.179	0.380	1.4e-39
TAIR|locus:2200908	842	AT1G61610 [Arabidopsis thalian	0.699	0.179	0.385	7.4e-39
TAIR|locus:2123111	669	CRK34 "cysteine-rich RLK (RECE	0.509	0.164	0.513	9.5e-39
TAIR|locus:2077147	676	CRK4 "cysteine-rich RLK (RECEP	0.796	0.254	0.377	1.5e-38
TAIR|locus:2121686	645	CRK19 "cysteine-rich RLK (RECE	0.699	0.234	0.387	7.5e-38

TAIR|locus:2093397 CES101 "CALLUS EXPRESSION OF RBCS 101" [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
 Identities = 68/157 (43%), Positives = 95/157 (60%)

Query:    64 GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNT--GSFNLLGHAWDLWKDDR 121
             GYM PEY   G FS KSDVFSFGVLMLEI+ G+K+ + ++   G  NL+ H W+L+K++R
Sbjct:   694 GYMSPEYFREGLFSAKSDVFSFGVLMLEIICGRKNNSFHHDSEGPLNLIVHVWNLFKENR 753

Query:   122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSL-KK 180
             V E+IDP +    +    ++R V+VALLCVQ+   DRP+M DVVSMI  +  N  SL K+
Sbjct:   754 VREVIDPSLGDSAVENPQVLRCVQVALLCVQQNADDRPSMLDVVSMIYGDGNNALSLPKE 813

Query:   181 LAFVRXXXXXXXXXXXXGTS-EFCSVNDITVSLINSR 216
              AF                  E  S N +T++++ +R
Sbjct:   814 PAFYDGPPRSSPEMEVEPPEMENVSANRVTITVMEAR 850

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

UNIPROTKB|O49974 KIK1 "Serine/threonine-protein kinase" [Zea mays (taxid:4577)]

 Score = 277 (102.6 bits), Expect = 6.2e-41, Sum P(2) = 6.2e-41
 Identities = 52/113 (46%), Positives = 79/113 (69%)

Query:    64 GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVY-NTGSFNLLGHAWDLWKDDRV 122
             GYM PEYA+ G FS+KSDV+ FGVL+LEI++GK++ + + +  S N+ G+AW  W +D  
Sbjct:   697 GYMSPEYAMEGIFSVKSDVYGFGVLILEIITGKRAVSFHCHEDSLNIAGYAWRQWNEDNA 756

Query:   123 HELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL 175
              ELIDPVI +   S+  ++R + +ALLCVQ+   +RP +  V+ M+SN+  +L
Sbjct:   757 AELIDPVI-RASCSVRQVLRCIHIALLCVQDHADERPDIPTVILMLSNDSSSL 808

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 281 (104.0 bits), Expect = 3.9e-40, Sum P(2) = 3.9e-40
 Identities = 64/155 (41%), Positives = 95/155 (61%)

Query:    64 GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHAWDLWKDDRV 122
             GYM PEYA+ G FS KSDVFS GV++LEI+SG+++++ YN G   NL  +AW LW     
Sbjct:   679 GYMAPEYAMGGLFSEKSDVFSLGVILLEIVSGRRNSSFYNDGQNPNLSAYAWKLWNTGED 738

Query:   123 HELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLA 182
               L+DPVI + E   + + R V V LLCVQ+   DRP+++ V+ M+S+E+ NL   K+ A
Sbjct:   739 IALVDPVIFE-ECFENEIRRCVHVGLLCVQDHANDRPSVATVIWMLSSENSNLPEPKQPA 797

Query:   183 FVRXXXXXXXXXXXXGTSE-FCSVNDITVSLINSR 216
             F+             G S+   S+N+++++ I  R
Sbjct:   798 FIPRRGTSEVESS--GQSDPRASINNVSLTKITGR 830

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0009637 "response to blue light" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 281 (104.0 bits), Expect = 8.2e-40, Sum P(2) = 8.2e-40
 Identities = 55/113 (48%), Positives = 78/113 (69%)

Query:    64 GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTG-SFNLLGHAWDLWKDDRV 122
             GYM PEY + G+FS+KSDVFSFGVL+LEI+SG+++    N     NLLGHAW  + +D+ 
Sbjct:   632 GYMSPEYQIDGYFSLKSDVFSFGVLVLEIVSGRRNRGFRNEEHKLNLLGHAWRQFLEDKA 691

Query:   123 HELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL 175
             +E+ID  + +    +S ++R + + LLCVQ+   DRP MS VV M+S+E L L
Sbjct:   692 YEIIDEAVNESCTDISEVLRVIHIGLLCVQQDPKDRPNMSVVVLMLSSEMLLL 744

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 288 (106.4 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
 Identities = 57/120 (47%), Positives = 86/120 (71%)

Query:    57 SNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNT-GSFNLLGHAWD 115
             S I+   GYM PEYA+ G +S+KSDV+SFGVL+LEI+SGKK+++ Y T G+ +L+ +AW 
Sbjct:   508 SRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWG 567

Query:   116 LWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL 175
             LW + R  EL+DP I ++    + ++R V + LLCVQE  A+RPT+S +V M+++  + L
Sbjct:   568 LWSNGRPLELVDPAIVEN-CQRNEVVRCVHIGLLCVQEDPAERPTLSTIVLMLTSNTVTL 626

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 1.4e-39, Sum P(2) = 1.4e-39
 Identities = 59/155 (38%), Positives = 96/155 (61%)

Query:    64 GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH 123
             GYM PEYA+ G FS+KSDV+SFGVL+LEI+SGK++T++ ++   +L+G+AW L+   R  
Sbjct:   696 GYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGKRNTSLRSSEHGSLIGYAWYLYTHGRSE 755

Query:   124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAF 183
             EL+DP I +   S    +R + VA+LCVQ++ A+RP M+ V+ M+ ++   L + ++  F
Sbjct:   756 ELVDPKI-RVTCSKREALRCIHVAMLCVQDSAAERPNMASVLLMLESDTATLAAPRQPTF 814

Query:   184 VRXXXXXXXXXXXXGTSE--FCSVNDITVSLINSR 216
                            +S+    S N+IT +++  R
Sbjct:   815 TSTRRNSIDVNFALDSSQQYIVSSNEITSTVVLGR 849

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 7.4e-39, Sum P(2) = 7.4e-39
 Identities = 59/153 (38%), Positives = 89/153 (58%)

Query:    64 GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH 123
             GYM PEYA+ G FS KSDV+SFGVL+LEI+SG+K+ +   T   +L+G+AW LW   +  
Sbjct:   692 GYMAPEYAMEGIFSEKSDVYSFGVLILEIVSGRKNVSFRGTDHGSLIGYAWHLWSQGKTK 751

Query:   124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAF 183
             E+IDP++ +D   ++  MR + V +LC Q++V  RP M  V+ M+ ++   L   ++  F
Sbjct:   752 EMIDPIV-KDTRDVTEAMRCIHVGMLCTQDSVIHRPNMGSVLLMLESQTSQLPPPRQPTF 810

Query:   184 VRXXXXXXXXXXXXGTSEFCSVNDITVSLINSR 216
                           G  +  SVND+T + I  R
Sbjct:   811 HSFLNSGDIELNFDG-HDVASVNDVTFTTIVGR 842

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:2123111 CRK34 "cysteine-rich RLK (RECEPTOR-like protein kinase) 34" [Arabidopsis thaliana (taxid:3702)]

 Score = 284 (105.0 bits), Expect = 9.5e-39, Sum P(2) = 9.5e-39
 Identities = 59/115 (51%), Positives = 81/115 (70%)

Query:    64 GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN---TGSFNLLGHAWDLWKDD 120
             GYM PEYA+RG FS+KSDV+SFGVL+LEI+SGKK+++ YN   +GS NL+ HAW LW++ 
Sbjct:   512 GYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKKNSSFYNIDDSGS-NLVTHAWRLWRNG 570

Query:   121 RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL 175
                EL+DP I +   S S   R + +ALLCVQE  ADRP +  ++ M+++    L
Sbjct:   571 SPLELVDPTIGESYQS-SEATRCIHIALLCVQEDPADRPLLPAIIMMLTSSTTTL 624

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2077147 CRK4 "cysteine-rich RLK (RECEPTOR-like protein kinase) 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 292 (107.8 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
 Identities = 69/183 (37%), Positives = 102/183 (55%)

Query:    44 YSRLRIIHRDLKASN---ILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTA 100
             +   RI   D   +N   I+   GYM PEYA+ G FS+KSDV+SFGVL+LEI+SGKK++ 
Sbjct:   495 FGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSN 554

Query:   101 VYN---TGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVAD 157
             VY    T + NL+ + W LW +    EL+DP   +D   ++ + R + +ALLCVQE   D
Sbjct:   555 VYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSF-RDNYRINEVSRCIHIALLCVQEEAED 613

Query:   158 RPTMSDVVSMISNEHLNLCSLKKLAFV----RXXXXXXXXXXXXGTSEFCSVNDITVSLI 213
             RPTMS +V M++   + L   ++  F     +             TS  CSV+D +++ +
Sbjct:   614 RPTMSAIVQMLTTSSIALAVPQRPGFFFRSSKHEQVGLVDRLSINTSALCSVDDASITNV 673

Query:   214 NSR 216
               R
Sbjct:   674 TPR 676

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006952 "defense response" evidence=TAS

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0012501 "programmed cell death" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IEP

TAIR|locus:2121686 CRK19 "cysteine-rich RLK (RECEPTOR-like protein kinase) 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 7.5e-38, Sum P(2) = 7.5e-38
 Identities = 60/155 (38%), Positives = 88/155 (56%)

Query:    64 GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF--NLLGHAWDLWKDDR 121
             GYM PEYA+ G FS+KSDV+SFGVL+LEI+SG K++++Y       NL+ + W LW +  
Sbjct:   493 GYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQMDESVGNLVTYTWRLWSNGS 552

Query:   122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKL 181
               EL+DP    D    S + R + +ALLCVQE   DRPTMS +V M++   + L   +  
Sbjct:   553 PSELVDPSFG-DNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTSLIALAEPRPP 611

Query:   182 AFVRXXXXXXXXXXXXGTSEFCSVNDITVSLINSR 216
              F               +S  CSV++ +++ +  R
Sbjct:   612 GFF-FRSKQEQAGPSIDSSTHCSVDEASITRVTPR 645

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.29.53.1 hypothetical protein (810 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	216
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-17
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-17
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-16
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-16
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-15
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-14
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	8e-14
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-12
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-11
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-11
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	4e-11
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-11
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-11
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-10
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	6e-10
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	8e-10
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	8e-10
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-09
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-09
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	3e-09
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-09
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	6e-09
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-08
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-08
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	3e-08
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-08
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	5e-08
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	5e-08
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	6e-08
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	6e-08
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	7e-08
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	8e-08
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-07
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-07
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-07
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-07
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-07
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	3e-07
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	3e-07
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	5e-07
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	6e-07
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	6e-07
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	8e-07
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	8e-07
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-06
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-06
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-06
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-06
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-06
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	3e-06
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	3e-06
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	3e-06
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	4e-06
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	4e-06
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	4e-06
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	5e-06
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	6e-06
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	7e-06
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	7e-06
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	7e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	8e-06
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	8e-06
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	8e-06
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	9e-06
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	9e-06
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	9e-06
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	9e-06
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-05
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-05
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-05
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-05
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	2e-05
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	2e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-05
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-05
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-05
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	3e-05
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-05
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-05
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	4e-05
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	4e-05
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	4e-05
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	4e-05
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	5e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-05
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	6e-05
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	7e-05
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	7e-05
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	8e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	9e-05
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	1e-04
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-04
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-04
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	1e-04
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-04
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	1e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-04
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-04
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-04
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-04
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	2e-04
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	2e-04
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	3e-04
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	4e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	4e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-04
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	4e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	5e-04
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	6e-04
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	6e-04
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	6e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	6e-04
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	6e-04
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	6e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	7e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	7e-04
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	7e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	8e-04
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	0.001
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.001
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	0.001
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	0.001
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	0.001
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	0.001
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	0.001
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	0.002
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	0.002
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	0.002
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	0.002
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	0.002
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	0.002
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	0.002
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	0.002
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	0.002
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	0.003
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.003
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.003
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	0.003
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	0.003
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	0.003
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	0.004
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	0.004
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	0.004
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	0.004
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	0.004
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	0.004
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	0.004

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 78.7 bits (195), Expect = 1e-17
 Identities = 45/189 (23%), Positives = 65/189 (34%), Gaps = 64/189 (33%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY------------ 65
           + + L           IA+G+ YL        IHRDL A N L+                
Sbjct: 96  RPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRD 152

Query: 66  ------------------MPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGS 106
                             M PE    G F+ KSDV+SFGVL+ EI + G++         
Sbjct: 153 LYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEP-------- 204

Query: 107 FNLLGHAWDLWKDDRVHELID-------PVITQDEISLSMLMRYVKVALLCVQETVADRP 159
                  +    +  V E +        P     E+         K+ L C  E   DRP
Sbjct: 205 -------YPGMSNAEVLEYLKKGYRLPKPPNCPPEL--------YKLMLQCWAEDPEDRP 249

Query: 160 TMSDVVSMI 168
           T S++V ++
Sbjct: 250 TFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 78.3 bits (194), Expect = 1e-17
 Identities = 43/173 (24%), Positives = 62/173 (35%), Gaps = 64/173 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           IA+G+ YL        IHRDL A N L+                                
Sbjct: 111 IARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPI 167

Query: 66  --MPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
             M PE    G F+ KSDV+SFGVL+ EI + G++                +    ++ V
Sbjct: 168 RWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQP---------------YPGMSNEEV 212

Query: 123 HELID-------PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI 168
            E +        P     E+          + L C  E   DRPT S++V ++
Sbjct: 213 LEYLKNGYRLPQPPNCPPEL--------YDLMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 75.7 bits (187), Expect = 1e-16
 Identities = 47/194 (24%), Positives = 67/194 (34%), Gaps = 65/194 (33%)

Query: 14  ANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY-------- 65
               +K  L  +        IA+G+ YL      + +HRDL A N L+            
Sbjct: 94  FPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFG 150

Query: 66  -----------------------MPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAV 101
                                  M PE    G F+ KSDV+SFGVL+ EI + G      
Sbjct: 151 LSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATP--- 207

Query: 102 YNTGSFNLLGHAWDLWKDDRVHELI-------DPVITQDEISLSMLMRYVKVALLCVQET 154
           Y                ++ V E +        P    DE+       Y ++ L C Q  
Sbjct: 208 YPG------------LSNEEVLEYLRKGYRLPKPEYCPDEL-------Y-ELMLSCWQLD 247

Query: 155 VADRPTMSDVVSMI 168
             DRPT S++V  +
Sbjct: 248 PEDRPTFSELVERL 261

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 75.6 bits (187), Expect = 1e-16
 Identities = 46/191 (24%), Positives = 69/191 (36%), Gaps = 65/191 (34%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------ 64
                L  +   ++   IA+G+ YL        +HRDL A N L+               
Sbjct: 94  KHGEKLTLKDLLQMALQIAKGMEYLE---SKNFVHRDLAARNCLVTENLVVKISDFGLSR 150

Query: 65  -------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNT 104
                              +M PE    G F+ KSDV+SFGVL+ EI + G++       
Sbjct: 151 DIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQP------ 204

Query: 105 GSFNLLGHAWDLWKDDRVHELID-------PVITQDEISLSMLMRYVKVALLCVQETVAD 157
                    +    ++ V EL++       P    DE+    LM      L C      D
Sbjct: 205 ---------YPGMSNEEVLELLEDGYRLPRPENCPDEL--YELM------LQCWAYDPED 247

Query: 158 RPTMSDVVSMI 168
           RPT S++V  +
Sbjct: 248 RPTFSELVEDL 258

Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 71.5 bits (176), Expect = 2e-15
 Identities = 36/107 (33%), Positives = 48/107 (44%), Gaps = 34/107 (31%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------- 63
           + +  L      RI+  I +GL YLH      IIHRDLK  NILLDS             
Sbjct: 84  ENEGKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLS 140

Query: 64  -----------------GYMPPEYAL-RGFFSIKSDVFSFGVLMLEI 92
                             YM PE  L +G++S KSD++S GV++ E+
Sbjct: 141 KLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 69.9 bits (172), Expect = 1e-14
 Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 31/109 (28%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           + K+  L        +  I   L YLH      I+HRDLK  NILLD             
Sbjct: 88  LKKRGRLSEDEARFYLRQILSALEYLHS---KGIVHRDLKPENILLDEDGHVKLADFGLA 144

Query: 64  ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                            YM PE  L   +    D++S GV++ E+L+GK
Sbjct: 145 RQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGK 193

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 68.0 bits (167), Expect = 8e-14
 Identities = 34/111 (30%), Positives = 44/111 (39%), Gaps = 33/111 (29%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           + +   L      +I   I +GL YLH      IIHRDLK  NILLD             
Sbjct: 89  LSRGGPLSEDEAKKIALQILRGLEYLH---SNGIIHRDLKPENILLDENGVVKIADFGLA 145

Query: 64  -----------------GYMPPE-YALRGFFSIKSDVFSFGVLMLEILSGK 96
                             YM PE       +  K DV+S GV++ E+L+GK
Sbjct: 146 KKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGK 196

Length = 260

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 63.6 bits (155), Expect = 3e-12
 Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 30/98 (30%)

Query: 26  VRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD------------SG--------- 64
           V  +I E + +GL YLH     +IIHRD+K SNILL             SG         
Sbjct: 106 VLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGT 162

Query: 65  ------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                 YM PE      +SI SDV+S G+ +LE+   +
Sbjct: 163 FTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNR 200

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 61.4 bits (150), Expect = 1e-11
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 34/94 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           I +GL YLH      I+HRD+K +NIL+DS                              
Sbjct: 110 ILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGT 166

Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
             +M PE      +   +D++S G  ++E+ +GK
Sbjct: 167 PYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGK 200

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 61.6 bits (150), Expect = 2e-11
 Identities = 32/89 (35%), Positives = 39/89 (43%), Gaps = 33/89 (37%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL------------------DSGYMP-------- 67
           IA+G+ YL        IHRDL A NIL+                  D  Y          
Sbjct: 112 IAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPI 168

Query: 68  ----PEYALRGFFSIKSDVFSFGVLMLEI 92
               PE A  G F+IKSDV+SFG+L+ EI
Sbjct: 169 KWTAPEAANYGRFTIKSDVWSFGILLTEI 197

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 60.6 bits (147), Expect = 4e-11
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 29/99 (29%)

Query: 25  QVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD---------------------- 62
           ++  +I   + +GL YL  Y+  RI+HRD+K SNIL++                      
Sbjct: 103 EILGKIAVAVVEGLTYL--YNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIAD 160

Query: 63  -----SGYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                S YM PE    G +++KSDV+S G+ ++E+  GK
Sbjct: 161 TFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGK 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 60.4 bits (147), Expect = 4e-11
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 34/119 (28%)

Query: 10  LLDAANIDK--KRLLDW---QVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS- 63
            +D  ++DK  K +      ++  +I   + +GL YLH   + +IIHRD+K SNIL++S 
Sbjct: 80  YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH--EKHKIIHRDVKPSNILVNSR 137

Query: 64  --------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                      YM PE      +S+KSD++S G+ ++E+ +G+
Sbjct: 138 GQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 59.9 bits (146), Expect = 5e-11
 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 32/115 (27%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
           L D      + L + Q+ A + + + +GL YLH      IIHRD+KA+NILL S      
Sbjct: 84  LKDLLKSTNQTLTESQI-AYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKL 139

Query: 64  ----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                  +M PE      +  K+D++S G+  +E+  GK
Sbjct: 140 IDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK 194

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 58.3 bits (142), Expect = 2e-10
 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------------------G 64
           I   L YLH    L II+RDLK  NILLD+                              
Sbjct: 102 IVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPE 158

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           Y+ PE  L   +    D +S GVL+ E+L+GK
Sbjct: 159 YLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGK 190

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 57.9 bits (140), Expect = 6e-10
 Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 31/180 (17%)

Query: 16  IDKKRL------LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD------- 62
           I+ K L      L W+ R +I  GIA+ L +LH      ++  +L    I++D       
Sbjct: 765 IEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL 824

Query: 63  -----------------SGYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTG 105
                            S Y+ PE       + KSD++ FG++++E+L+GK         
Sbjct: 825 RLSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGV 884

Query: 106 SFNLLGHAWDLWKDDRVHELIDPVITQD-EISLSMLMRYVKVALLCVQETVADRPTMSDV 164
             +++  A   + D  +   IDP I  D  ++ + ++  + +AL C       RP  +DV
Sbjct: 885 HGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDV 944

Length = 968

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 57.0 bits (138), Expect = 8e-10
 Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 36/114 (31%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD------------S 63
            DK   +   +  +I   I + L YLH  S+L +IHRD+K SN+L++            S
Sbjct: 94  YDKGLTIPEDILGKIAVSIVKALEYLH--SKLSVIHRDVKPSNVLINRNGQVKLCDFGIS 151

Query: 64  G----------------YMPPE-----YALRGFFSIKSDVFSFGVLMLEILSGK 96
           G                YM PE        +G + +KSDV+S G+ M+E+ +G+
Sbjct: 152 GYLVDSVAKTIDAGCKPYMAPERINPELNQKG-YDVKSDVWSLGITMIELATGR 204

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 56.8 bits (138), Expect = 8e-10
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 31/92 (33%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           I +GL YLH   +  IIHRD+K SN+L+         D G                    
Sbjct: 108 ILKGLDYLHT--KRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVT 165

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           YM PE      +S  +D++S G+ +LE   GK
Sbjct: 166 YMSPERIQGESYSYAADIWSLGLTLLECALGK 197

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 55.9 bits (135), Expect = 2e-09
 Identities = 50/199 (25%), Positives = 73/199 (36%), Gaps = 56/199 (28%)

Query: 13  AANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------- 63
              I+ KRLL           I +G+ YL      R IHRDL A NIL++S         
Sbjct: 103 RDQINLKRLL------LFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDF 153

Query: 64  ------------------GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTA 100
                             G  P     PE      FS  SDV+SFGV + E+ +    + 
Sbjct: 154 GLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQ 213

Query: 101 VYNTGSFNLLGHAWDLWKDDRVHELID-------PVITQDEISLSMLMRYVKVALLCVQE 153
                   ++G A       R+ EL+        P    DE+    LM+      LC + 
Sbjct: 214 SPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEV--YDLMK------LCWEA 265

Query: 154 TVADRPTMSDVVSMISNEH 172
              DRP+ +D++ ++    
Sbjct: 266 EPQDRPSFADLILIVDRLR 284

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 55.1 bits (133), Expect = 3e-09
 Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 32/90 (35%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGYM--------------------------- 66
           +A+G+ YL +      IHRDL A NIL+    +                           
Sbjct: 113 VAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYK 169

Query: 67  --PPEYALRGFFSIKSDVFSFGVLMLEILS 94
              PE A  G FS KSDV+SFG+L+ E+ +
Sbjct: 170 WTAPEAASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 55.2 bits (133), Expect = 3e-09
 Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 33/91 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           IA G+ +L   S  R +HRDL A N L+ S                              
Sbjct: 126 IALGMDHL---SNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPL 182

Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            ++ PE      FS KSDV+SFGVLM E+ +
Sbjct: 183 RWLAPEAVQEDDFSTKSDVWSFGVLMWEVFT 213

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 54.9 bits (133), Expect = 4e-09
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 32/97 (32%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSGY------------- 65
           A +   + QGL YLH      +IHRD+K+ NILL         D G+             
Sbjct: 119 AYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNS 175

Query: 66  -------MPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                  M PE   R  +  K D++S G++ +E+  G
Sbjct: 176 VVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 54.4 bits (131), Expect = 6e-09
 Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 37/95 (38%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL------------DSG----------------- 64
           +A+G  YL +      IHRD+ A N LL            D G                 
Sbjct: 125 VAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRA 181

Query: 65  -----YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                +MPPE  L G F+ K+DV+SFGVL+ EI S
Sbjct: 182 MLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 31/88 (35%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------------------DSGYMP----- 67
           + +G+ YL +      +HRDL A N+L+                     DSG +P     
Sbjct: 111 VCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTA 167

Query: 68  PEYALR-GFFSIKSDVFSFGVLMLEILS 94
           PE ALR   FS KSDV+SFG+L+ EI S
Sbjct: 168 PE-ALREKKFSTKSDVWSFGILLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 41/117 (35%)

Query: 13  AANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------- 63
             NI  + LL+W V+      IA+G+ YL +    R++HRDL A N+L+ +         
Sbjct: 103 KDNIGSQYLLNWCVQ------IAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDF 153

Query: 64  -----------------GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILS-GKK 97
                            G +P      E  L   ++ KSDV+S+GV + E+++ G K
Sbjct: 154 GLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAK 210

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 52.3 bits (125), Expect = 3e-08
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 33/91 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           +A G+ Y+    R+  IHRDL+++NIL+  G                             
Sbjct: 111 VAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPI 167

Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+++
Sbjct: 168 KWTAPEAALYGRFTIKSDVWSFGILLTELVT 198

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 52.0 bits (125), Expect = 3e-08
 Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 33/118 (27%)

Query: 7   YSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL----- 61
           Y  LL+       R L       +   +A G+ YL   +    IHRDL A N+L+     
Sbjct: 85  YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNI 141

Query: 62  ----DSG---------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
               D G                     +  PE AL   FSIKSDV+SFG+L+ EI++
Sbjct: 142 CKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 51.7 bits (125), Expect = 5e-08
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 32/93 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           +   L YLH  SR +I+HRD+K  NI L S                              
Sbjct: 112 LCLALKYLH--SR-KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPY 168

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK 97
           Y+ PE      ++ KSD++S G ++ E+ + K 
Sbjct: 169 YLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 51.5 bits (124), Expect = 5e-08
 Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 33/116 (28%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----- 64
           + D   I  K L + ++ A I+    +GL YLH     + IHRD+KA NILL+       
Sbjct: 85  VSDIMKITNKTLTEEEI-AAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKL 140

Query: 65  ------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                   +M PE      ++ K+D++S G+  +E+  GK
Sbjct: 141 ADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 51.2 bits (123), Expect = 6e-08
 Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 41/126 (32%)

Query: 2   CKKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL 61
             K VY           K ++  ++  +I     + L YL +   L+IIHRD+K SNILL
Sbjct: 92  FYKYVYEV--------LKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILL 141

Query: 62  D------------SG----------------YMPPEYAL---RGFFSIKSDVFSFGVLML 90
           D            SG                YM PE      R  + ++SDV+S G+ + 
Sbjct: 142 DRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLY 201

Query: 91  EILSGK 96
           E+ +GK
Sbjct: 202 EVATGK 207

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 51.4 bits (123), Expect = 6e-08
 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 30/116 (25%)

Query: 8   SKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---- 63
           ++ +D  ++D  R +   V  RI   + +GL YL     L+I+HRD+K SN+L+++    
Sbjct: 78  TEFMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQV 134

Query: 64  -----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                   YM PE      + I SDV+S G+  +E+  G+
Sbjct: 135 KLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGR 190

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 51.2 bits (123), Expect = 7e-08
 Identities = 35/101 (34%), Positives = 41/101 (40%), Gaps = 32/101 (31%)

Query: 25  QVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------------- 63
           QV+  I E I   L YLH      IIHRD+K  NILLD                      
Sbjct: 101 QVKFWICE-IVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLT 156

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK 97
                  GYM PE   R  +S+  D +S GV   E L GK+
Sbjct: 157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKR 197

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 51.0 bits (122), Expect = 8e-08
 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 31/91 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------------------GY 65
           I  GL +LHQ    RI++RDLK  N+LLD                             GY
Sbjct: 104 IICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGY 160

Query: 66  MPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           M PE      +    D F+ G  + E+++G+
Sbjct: 161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 50.7 bits (122), Expect = 8e-08
 Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 32/98 (32%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------- 64
           A  +  + QGL YLH+     +IHRD+KA+NIL          D G              
Sbjct: 102 AVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS 158

Query: 65  ------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE       S  SD++S G  ++E+L+G 
Sbjct: 159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGN 196

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 31/94 (32%), Positives = 36/94 (38%), Gaps = 33/94 (35%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNIL------------------LDSGYM--------- 66
           + + + YL        IHRDL A N L                  LD  Y          
Sbjct: 109 VCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPV 165

Query: 67  ---PPEYALRGFFSIKSDVFSFGVLMLEILSGKK 97
              PPE      FS KSDV+SFGVLM E+ S  K
Sbjct: 166 KWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGK 199

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 46/182 (25%), Positives = 62/182 (34%), Gaps = 55/182 (30%)

Query: 20  RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------- 64
            L D+ V+      IA G+ YL      R IHRDL A NILL S                
Sbjct: 98  TLCDYAVQ------IANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALP 148

Query: 65  -----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF 107
                            +  PE      FS  SDV+ FGV + E+ +       Y    +
Sbjct: 149 QNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFT-------YGEEPW 201

Query: 108 NLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM 167
             L  +  L K D+  E     + + E           V L C     ADRPT + +   
Sbjct: 202 AGLSGSQILKKIDKEGER----LERPEACPQ---DIYNVMLQCWAHNPADRPTFAALREF 254

Query: 168 IS 169
           + 
Sbjct: 255 LP 256

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 49.9 bits (119), Expect = 2e-07
 Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 50/122 (40%)

Query: 3   KKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL- 61
            KL  +KL+D A             A+I EG+A    ++    R   IHRDL+A+NIL+ 
Sbjct: 97  IKLTINKLIDMA-------------AQIAEGMA----FIE---RKNYIHRDLRAANILVS 136

Query: 62  --------DSG---------------------YMPPEYALRGFFSIKSDVFSFGVLMLEI 92
                   D G                     +  PE    G F+IKSDV+SFG+L+ EI
Sbjct: 137 ETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 196

Query: 93  LS 94
           ++
Sbjct: 197 VT 198

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 49.7 bits (118), Expect = 2e-07
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 33/89 (37%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 111 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 167

Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEI 92
            +  PE AL G F+IKSDV+SFG+L+ E+
Sbjct: 168 KWTAPEAALYGRFTIKSDVWSFGILLTEL 196

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 49.7 bits (118), Expect = 2e-07
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 33/91 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  IHRDL+A+NIL+         D G                    
Sbjct: 111 IADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPI 167

Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+++
Sbjct: 168 KWTAPEAALYGRFTIKSDVWSFGILLTELVT 198

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 49.4 bits (118), Expect = 3e-07
 Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 47/177 (26%)

Query: 12  DAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------D 62
           D   + KK L + ++ A I  G  QGL YLH + R   IHRD+KA NILL         D
Sbjct: 103 DILEVHKKPLQEVEIAA-ICHGALQGLAYLHSHER---IHRDIKAGNILLTEPGTVKLAD 158

Query: 63  SG----------------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
            G                +M PE  L    G +  K DV+S G+  +E+   ++   ++N
Sbjct: 159 FGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL--AERKPPLFN 216

Query: 104 TGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPT 160
             + + L H   + ++D       P ++ ++ S      +      C+Q+   DRP+
Sbjct: 217 MNAMSALYH---IAQND------SPTLSSNDWSDY----FRNFVDSCLQKIPQDRPS 260

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ YL      + +HRDL A N ++         D G                    
Sbjct: 128 IADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLP 184

Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
             +M PE    G F+ KSDV+SFGV++ E+ +
Sbjct: 185 VRWMAPESLKDGVFTTKSDVWSFGVVLWEMAT 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 48.7 bits (116), Expect = 5e-07
 Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 39/97 (40%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           +A+G +YL Q   +  IHRDL A N L+                                
Sbjct: 115 VAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEG 171

Query: 65  -------YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                  +M PE  L G F+ +SDV+SFGVLM EIL+
Sbjct: 172 EGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILT 208

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 48.5 bits (116), Expect = 6e-07
 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           IA G+ YL     L  +HRDL   N L+   Y                            
Sbjct: 139 IASGMRYL---ESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLP 195

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M  E  L G F+ KSDV++FGV + EIL+
Sbjct: 196 IRWMAWESVLLGKFTTKSDVWAFGVTLWEILT 227

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 48.6 bits (116), Expect = 6e-07
 Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           IA G+ YL   S    +HRDL A N L+  G                             
Sbjct: 133 IAAGMEYL---SSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLP 189

Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
             +MPPE  L G F+ +SD++SFGV++ EI S
Sbjct: 190 VRWMPPEAILYGKFTTESDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 48.1 bits (114), Expect = 8e-07
 Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 48/182 (26%)

Query: 12  DAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------D 62
           D   + KK L + ++ A +  G  QGL YLH ++   +IHRD+KA NILL         D
Sbjct: 103 DLLEVHKKPLQEVEIAA-VTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGD 158

Query: 63  SG----------------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
            G                +M PE  L    G +  K DV+S G+  +E+   ++   ++N
Sbjct: 159 FGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL--AERKPPLFN 216

Query: 104 TGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSD 163
             + + L H         + +   P +     S      +      C+Q+   DRPT S+
Sbjct: 217 MNAMSALYH---------IAQNESPALQSGHWSEY----FRNFVDSCLQKIPQDRPT-SE 262

Query: 164 VV 165
           V+
Sbjct: 263 VL 264

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 47.9 bits (114), Expect = 8e-07
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 39/106 (36%)

Query: 26  VRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------------- 63
           V     E + +GL YLH+    +IIHRD+K +N+L+DS                      
Sbjct: 104 VIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG 160

Query: 64  ------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGK 96
                        +M PE  LRG  +    DV+S G +++E+ + K
Sbjct: 161 AGEFQGQLLGTIAFMAPE-VLRGEQYGRSCDVWSVGCVIIEMATAK 205

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 48.1 bits (114), Expect = 1e-06
 Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 47/182 (25%)

Query: 12  DAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------D 62
           D   + KK L + ++ A I  G  QGL YLH ++   +IHRD+KA NILL         D
Sbjct: 109 DLLEVHKKPLQEVEIAA-ITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLAD 164

Query: 63  SG----------------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
            G                +M PE  L    G +  K DV+S G+  +E+   ++   ++N
Sbjct: 165 FGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL--AERKPPLFN 222

Query: 104 TGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSD 163
             + + L H   + ++D       P +  +E + S    +V     C+Q+   +RP  ++
Sbjct: 223 MNAMSALYH---IAQND------SPTLQSNEWTDS-FRGFVD---YCLQKIPQERPASAE 269

Query: 164 VV 165
           ++
Sbjct: 270 LL 271

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 31/91 (34%), Positives = 39/91 (42%), Gaps = 32/91 (35%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           +A  L +LH    L II+RDLK  NILLD                               
Sbjct: 107 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 163

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
           YM PE   R   +  +D +SFGVLM E+L+G
Sbjct: 164 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 194

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 30/106 (28%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------- 64
           K++L+  Q   RI   + +GL  LH+    +I+HRDLK++NILL +              
Sbjct: 96  KRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKV 152

Query: 65  --------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                         YM PE      +S KSD++S G L+ E+ +  
Sbjct: 153 LKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFA 198

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 34/104 (32%)

Query: 22  LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------ 63
                   ++ GIA G+ YL   S +  +HRDL A NIL++S                  
Sbjct: 103 FTVGQLVGMLRGIASGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159

Query: 64  --------GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILS 94
                   G +P     PE      F+  SDV+SFG++M E++S
Sbjct: 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 29/99 (29%)

Query: 25  QVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------------- 63
            +  +I   + +GL YL +  + +I+HRD+K SNIL++S                     
Sbjct: 99  NILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 156

Query: 64  ------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                  YM PE      ++++SD++S G+ ++E+  G+
Sbjct: 157 SFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGR 195

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 38/111 (34%)

Query: 17  DKKRLLDWQVR---ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------- 63
           D+    ++  R   A ++        YLH      II+RDLK  N+LLDS          
Sbjct: 86  DRGLFDEYTARFYIACVVLAFE----YLH---NRGIIYRDLKPENLLLDSNGYVKLVDFG 138

Query: 64  ------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                              Y+ PE  L   +    D +S G+L+ E+L+G+
Sbjct: 139 FAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGR 189

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 46.6 bits (110), Expect = 3e-06
 Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 47/185 (25%)

Query: 12  DAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------D 62
           D   + KK L + ++ A I  G  QGL YLH ++   +IHRD+KA NILL         D
Sbjct: 113 DLLEVHKKPLQEVEIAA-ITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLAD 168

Query: 63  SG----------------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
            G                +M PE  L    G +  K DV+S G+  +E+   ++   ++N
Sbjct: 169 FGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL--AERKPPLFN 226

Query: 104 TGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSD 163
             + + L H         + +   P +  +E S      +V     C+Q+   DRPT  +
Sbjct: 227 MNAMSALYH---------IAQNESPTLQSNEWS-DYFRNFVDS---CLQKIPQDRPTSEE 273

Query: 164 VVSMI 168
           ++  +
Sbjct: 274 LLKHM 278

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------------------G 64
           I  GL +LH+     II+RDLK  N+LLDS                              
Sbjct: 105 IVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPD 161

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           Y+ PE      +    D ++ GVL+ E+L+G+
Sbjct: 162 YIAPEILSYQPYGPAVDWWALGVLLYEMLAGQ 193

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 31/93 (33%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDSG------------------------------- 64
           Q LL +H      +IHRD+K++NILL S                                
Sbjct: 151 QVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPY 210

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK 97
           Y+ PE   R  +S K+D+FS GVL+ E+L+ K+
Sbjct: 211 YVAPEIWRRKPYSKKADMFSLGVLLYELLTLKR 243

Length = 496

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 46.2 bits (109), Expect = 4e-06
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 33/91 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL------------------DSGYMP-------- 67
           IA+G+ ++ Q +    IHRDL+A+NIL+                  D+ Y          
Sbjct: 111 IAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 167

Query: 68  ----PEYALRGFFSIKSDVFSFGVLMLEILS 94
               PE    G F+IKSDV+SFG+L++EI++
Sbjct: 168 KWTAPEAINFGSFTIKSDVWSFGILLMEIVT 198

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 35/100 (35%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---------------- 64
           I   IA G++YL   +    +HRDL   N L+         D G                
Sbjct: 127 IAVQIASGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGH 183

Query: 65  ------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKK 97
                 +MPPE  +   F+ +SDV+SFGV++ EI + GK+
Sbjct: 184 TMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQ 223

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 46.0 bits (109), Expect = 4e-06
 Identities = 44/168 (26%), Positives = 62/168 (36%), Gaps = 54/168 (32%)

Query: 34  IAQGLLYL--HQYSRLRIIHRDLKASNILLDSG--------------------------- 64
           + +G+ YL   Q+     IHRDL A N L+D                             
Sbjct: 109 VCEGMAYLESKQF-----IHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKF 163

Query: 65  ---YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDD 120
              + PPE  L   FS KSDV++FGVLM E+ S GK     +N              K  
Sbjct: 164 PVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVE--------KVS 215

Query: 121 RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI 168
           +   L  P +  +++   M          C  E   +RPT   ++S I
Sbjct: 216 QGLRLYRPHLASEKVYAIMYS--------CWHEKAEERPTFQQLLSSI 255

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 41/165 (24%), Positives = 59/165 (35%), Gaps = 53/165 (32%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           +A+G+ +L      + IHRDL A N+L+   +                            
Sbjct: 141 VARGMEFLASK---KCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLP 197

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEI--LSGKKSTAVYNTGSFNLLGHAWDLWKDD 120
              M PE      ++ +SDV+SFGVL+ EI  L G     +     F LL          
Sbjct: 198 VKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG------- 250

Query: 121 RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVV 165
             + +  P     E  L  LMR       C  E  + RPT   +V
Sbjct: 251 --YRMEKPQNCTQE--LYHLMRD------CWHEVPSQRPTFKQLV 285

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 45.5 bits (108), Expect = 6e-06
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           IA G+ YLH   +  +IH+D+ A N ++D                               
Sbjct: 126 IACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRP 182

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M  E  +   +S  SDV+SFGVL+ E+++
Sbjct: 183 VKWMALESLVNKEYSSASDVWSFGVLLWELMT 214

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 45.2 bits (107), Expect = 7e-06
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 36/99 (36%)

Query: 32  EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------------------- 64
           E + +GL YLH      I+HRDLKA N+L+D+                            
Sbjct: 115 EQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQ 171

Query: 65  ----YMPPE--YALRGFFSIKSDVFSFGVLMLEILSGKK 97
               +M PE  ++    +S K D++S G ++LE+ +G++
Sbjct: 172 GSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRR 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 45.3 bits (107), Expect = 7e-06
 Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 58/175 (33%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------- 63
           ++ GIA G+ YL   S +  +HRDL A NIL++S                          
Sbjct: 111 MLRGIASGMKYL---SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTR 167

Query: 64  -GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW 117
            G +P     PE      F+  SDV+S+G++M E++S       Y    +      W++ 
Sbjct: 168 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS-------YGERPY------WEMS 214

Query: 118 KDDRVHELID----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI 168
             D +  + +    P       +L  LM      L C Q+   +RP    +VS++
Sbjct: 215 NQDVIKAIEEGYRLPAPMDCPAALHQLM------LDCWQKDRNERPKFEQIVSIL 263

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 45.2 bits (107), Expect = 7e-06
 Identities = 42/170 (24%), Positives = 63/170 (37%), Gaps = 53/170 (31%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------------------------MP 67
           IA G+ YL   S    IHRDL A N +L                              MP
Sbjct: 122 IALGMEYL---SNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 178

Query: 68  PEY-ALRGF----FSIKSDVFSFGVLMLEILSGKKS--TAVYNTGSFNLLGHAWDLWKDD 120
            ++ A+       ++ KSDV++FGV M EI +  ++    V N   ++ L H        
Sbjct: 179 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG------- 231

Query: 121 RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             + L  P    DE+   M          C +    DRPT + +  ++ N
Sbjct: 232 --NRLKQPEDCLDELYDLMYS--------CWRADPKDRPTFTKLREVLEN 271

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 44.9 bits (106), Expect = 8e-06
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 29/87 (33%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNIL---------------------LDSGYMP----- 67
           +A+G+ YL      +++HRDL A NIL                     +D+  +P     
Sbjct: 109 VAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTA 165

Query: 68  PEYALRGFFSIKSDVFSFGVLMLEILS 94
           PE      FS KSDV+S+GVL+ E+ S
Sbjct: 166 PEALKHKKFSSKSDVWSYGVLLWEVFS 192

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 44.9 bits (107), Expect = 8e-06
 Identities = 32/111 (28%), Positives = 37/111 (33%), Gaps = 40/111 (36%)

Query: 22  LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------ 63
           LD  V    I  I   L YLH      IIHRDLK  NIL+DS                  
Sbjct: 90  LDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146

Query: 64  -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                               Y+ PE  L    S   D +S G ++ E L G
Sbjct: 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVG 197

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 45.0 bits (106), Expect = 8e-06
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 33/91 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGYM--------------------------- 66
           IA+G+ Y+    R   IHRDL+A+N+L+    M                           
Sbjct: 112 IAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 168

Query: 67  ---PPEYALRGFFSIKSDVFSFGVLMLEILS 94
               PE    G F+IKSDV+SFG+L+ EI++
Sbjct: 169 KWTAPEAINFGSFTIKSDVWSFGILLYEIVT 199

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 45.3 bits (107), Expect = 9e-06
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 31/97 (31%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------GYMP----------- 67
           I + I +GL YLH     RIIHRD+K  NI ++               P           
Sbjct: 162 IEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAG 218

Query: 68  ------PEYALRGFFSIKSDVFSFGVLMLEILSGKKS 98
                 PE   R  ++ K+D++S G+++ E+L+   +
Sbjct: 219 TVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPST 255

Length = 357

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 45.2 bits (107), Expect = 9e-06
 Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 53/128 (41%)

Query: 11  LDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------ 64
           +D  +++   + D Q  A +   I  G+ YLH   R  I+HRD+K SN+L++S       
Sbjct: 154 MDGGSLEGTHIADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIA 210

Query: 65  -----------------------YMPPE-------------YALRGFFSIKSDVFSFGVL 88
                                  YM PE             YA         D++S GV 
Sbjct: 211 DFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYA--------GDIWSLGVS 262

Query: 89  MLEILSGK 96
           +LE   G+
Sbjct: 263 ILEFYLGR 270

Length = 353

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 44.9 bits (106), Expect = 9e-06
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 40/111 (36%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------- 65
           ++D +RLL+W V+      IA+G+ YL ++   R++HR+L A NILL S           
Sbjct: 105 SLDPQRLLNWCVQ------IAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGV 155

Query: 66  ---MPP-------------------EYALRGFFSIKSDVFSFGVLMLEILS 94
              + P                   E  L G ++ +SDV+S+GV + E++S
Sbjct: 156 ADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMS 206

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 45.2 bits (107), Expect = 9e-06
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   SR + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 182 VARGMEFLA--SR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 238

Query: 75  ------------FFSIKSDVFSFGVLMLEILS 94
                        ++ +SDV+SFGVL+ EI S
Sbjct: 239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFS 270

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 32/113 (28%)

Query: 13  AANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DS 63
             ++ K   LD    A I+  +  GL YLH+      IHRD+KA+NILL         D 
Sbjct: 86  CLDLLKPGKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADF 142

Query: 64  G--------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           G                    +M PE   +  +  K+D++S G+  +E+  G+
Sbjct: 143 GVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGE 195

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 34/101 (33%)

Query: 30  IIEGIAQGLLYLH-----QYSRLRIIHRDLKASNILLDSG-------------------- 64
           I   + Q LL L+           ++HRDLK +NI LD+                     
Sbjct: 107 IWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSF 166

Query: 65  ---------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                    YM PE      +  KSD++S G L+ E+ +  
Sbjct: 167 AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 39/104 (37%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------- 64
           A +++ + +GL YLH   +   IHRD+KA NILL                          
Sbjct: 105 ATVLKEVLKGLEYLHSNGQ---IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRK 161

Query: 65  ----------YMPPE--YALRGFFSIKSDVFSFGVLMLEILSGK 96
                     +M PE    + G +  K+D++SFG+  +E+ +G 
Sbjct: 162 VRKTFVGTPCWMAPEVMEQVHG-YDFKADIWSFGITAIELATGA 204

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 34/94 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           + +GL YLH      I+HRD+K SNIL+++                              
Sbjct: 109 LLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITL 165

Query: 65  -YMPPEYALRGF-FSIKSDVFSFGVLMLEILSGK 96
            Y PPE  L    +  + D++S G ++ E+  GK
Sbjct: 166 WYRPPELLLGATRYGPEVDMWSVGCILAELFLGK 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 42/169 (24%), Positives = 63/169 (37%), Gaps = 54/169 (31%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNIL------------------LDSGYM--------- 66
           + +G+ YL + S    IHRDL A N L                  LD  Y          
Sbjct: 109 VCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPV 165

Query: 67  ---PPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
              PPE      +S KSDV+SFGVLM E+ + GK      +                   
Sbjct: 166 KWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN------------------ 207

Query: 123 HELIDPVITQDEISLSML--MRYVKVALLCVQETVADRPTMSDVVSMIS 169
           +E+++ +     +    L  M   +V   C  E    RPT ++++  I+
Sbjct: 208 YEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL-------------------DSGY--------- 65
           +A+G+ +L   +    IHRDL A N+LL                   DS Y         
Sbjct: 150 VAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLP 206

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M PE      ++ +SDV+S+G+L+ EI S
Sbjct: 207 VKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 36/110 (32%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           I++G+ YL   + ++++HRDL A N+L+  G                             
Sbjct: 136 ISRGMQYL---AEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIP 192

Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEI--LSGKKSTAVYNTGSFNLL 110
             +M  E      ++ +SDV+SFGVL+ EI  L G     +     FNLL
Sbjct: 193 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLL 242

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 44.0 bits (105), Expect = 2e-05
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 33/91 (36%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDSG-----------------------------YM 66
           +GL Y H +   RI+HRDLK  NIL++                               Y 
Sbjct: 109 RGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYR 165

Query: 67  PPEYALRG-FFSIKSDVFSFGVLMLEILSGK 96
            PE  L    +S   D++S G +  E+++GK
Sbjct: 166 APEILLGSKHYSTAVDIWSVGCIFAEMITGK 196

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 35/95 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           I +G+ YLH      I+HRD+K +NIL DS                              
Sbjct: 113 ILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTG 169

Query: 65  ---YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
              +M PE      +  K+DV+S G  ++E+L+ K
Sbjct: 170 TPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEK 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 43.4 bits (102), Expect = 3e-05
 Identities = 54/184 (29%), Positives = 71/184 (38%), Gaps = 64/184 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           +A+G+ YL   SR R IHRDL A N+L+         D G                    
Sbjct: 143 VARGMEYLE--SR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLP 199

Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEI--LSGKKSTAVYNTGSFNLL--GHAWDLWK 118
             +M PE      ++ +SDV+SFG+LM EI  L G     +     F LL  GH  D   
Sbjct: 200 VKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDK-P 258

Query: 119 DDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM-------ISNE 171
            +  HEL             MLMR       C       RPT   +V         +S E
Sbjct: 259 SNCTHELY------------MLMRE------CWHAVPTQRPTFKQLVEALDKVLAAVSEE 300

Query: 172 HLNL 175
           +L+L
Sbjct: 301 YLDL 304

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 43.6 bits (101), Expect = 3e-05
 Identities = 34/121 (28%), Positives = 43/121 (35%), Gaps = 42/121 (34%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------- 63
            I +K  L       I+  I   L YLH      IIHRD+K  NILLD            
Sbjct: 91  KIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFG 147

Query: 64  -------------------------GYMPPEYALRGFF---SIKSDVFSFGVLMLEILSG 95
                                    GYM PE  L       S  SD++S G+ + E+L+G
Sbjct: 148 LAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTG 207

Query: 96  K 96
            
Sbjct: 208 L 208

Length = 384

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 43.3 bits (102), Expect = 3e-05
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 38/101 (37%)

Query: 31  IEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------------------- 64
           +  I +GL YLH  +R  IIHRD+K +NIL+D+                           
Sbjct: 112 VRQILKGLNYLH--NR-GIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGA 168

Query: 65  ---------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                    +M PE   +  ++ K+D++S G L++E+L+GK
Sbjct: 169 RPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGK 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 43.3 bits (102), Expect = 3e-05
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------------------G 64
           I  GL +LHQ    RII+RDLK  N+LLD+                             G
Sbjct: 106 IISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPG 162

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           +M PE      +    D F+ GV + E+++ +
Sbjct: 163 FMAPELLQGEEYDFSVDYFALGVTLYEMIAAR 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 30/123 (24%)

Query: 1   VCKKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNIL 60
           +C + +    LD    + KR+ + ++  ++   + +GL YL +  + +I+HRD+K SNIL
Sbjct: 80  ICMEHMDGGSLDQVLKEAKRIPE-EILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNIL 136

Query: 61  LDS---------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEIL 93
           ++S                            YM PE      +S++SD++S G+ ++E+ 
Sbjct: 137 VNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELA 196

Query: 94  SGK 96
            G+
Sbjct: 197 IGR 199

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 29/99 (29%)

Query: 25  QVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------------- 63
           Q+  ++   + +GL YL +  + +I+HRD+K SNIL++S                     
Sbjct: 103 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 160

Query: 64  ------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                  YM PE      +S++SD++S G+ ++E+  G+
Sbjct: 161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGR 199

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   SR + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 188 VAKGMEFLA--SR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 244

Query: 75  ------------FFSIKSDVFSFGVLMLEILS 94
                        ++I+SDV+SFGVL+ EI S
Sbjct: 245 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 276

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 35/93 (37%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL-------------------DSGYM-------- 66
           +A G+ YL        +HRDL A N+LL                    S Y         
Sbjct: 104 VAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRW 160

Query: 67  -----PPEYALRGFFSIKSDVFSFGVLMLEILS 94
                 PE    G FS KSDV+S+GV + E  S
Sbjct: 161 PLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS 193

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 42.9 bits (101), Expect = 5e-05
 Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 34/96 (35%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL-------------------DSGY--------- 65
           +AQG+ +L   +    IHRD+ A N+LL                   DS Y         
Sbjct: 221 VAQGMDFL---ASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP 277

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS 98
              M PE      ++++SDV+S+G+L+ EI S  KS
Sbjct: 278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKS 313

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 42.7 bits (101), Expect = 5e-05
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 33/93 (35%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           + QGL + H +    I+HRDLK  N+L+++                              
Sbjct: 107 LLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRW 163

Query: 65  YMPPEYALR-GFFSIKSDVFSFGVLMLEILSGK 96
           Y  PE  L    +S   D++S G +  E+LS +
Sbjct: 164 YRAPELLLGDKGYSTPVDIWSVGCIFAELLSRR 196

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 42.5 bits (100), Expect = 6e-05
 Identities = 49/184 (26%), Positives = 72/184 (39%), Gaps = 74/184 (40%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------- 63
           ++ GIA G+ YL   S +  +HRDL A NIL++S                          
Sbjct: 111 MLRGIAAGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 167

Query: 64  ---GYMP-----PE-YALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHA 113
              G +P     PE  A R F S  SDV+S+G++M E++S G++                
Sbjct: 168 SLGGKIPIRWTAPEAIAYRKFTS-ASDVWSYGIVMWEVMSYGERPY-------------- 212

Query: 114 WDLWKDDRVHELIDPVITQD---------EISLSMLMRYVKVALLCVQETVADRPTMSDV 164
           WD+   D ++      I QD           +L  LM      L C Q+    RP    +
Sbjct: 213 WDMSNQDVIN-----AIEQDYRLPPPMDCPTALHQLM------LDCWQKDRNARPKFGQI 261

Query: 165 VSMI 168
           VS +
Sbjct: 262 VSTL 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 42.5 bits (100), Expect = 7e-05
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 42/126 (33%)

Query: 11  LDAANIDK-------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           +DA ++DK          +   V  RI   + +GL +L +     IIHRD+K +N+L++ 
Sbjct: 81  MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNG 138

Query: 64  ---------------------------GYMPPEY------ALRGFFSIKSDVFSFGVLML 90
                                       YM PE            ++++SDV+S G+ +L
Sbjct: 139 NGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSIL 198

Query: 91  EILSGK 96
           E+  G+
Sbjct: 199 EMALGR 204

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL 61
             K + L  +  A I+    +GL YLH+    ++IHRD+K  NILL
Sbjct: 104 RKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILL 146

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 42.1 bits (99), Expect = 8e-05
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------------------G 64
           IA GL +LH      II+RDLK  N++LD+                              
Sbjct: 110 IAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPD 166

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           Y+ PE      +    D ++FGVL+ E+L+G+
Sbjct: 167 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 41.9 bits (98), Expect = 9e-05
 Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 35/96 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           IA G++YL   + L  +HRDL   N L+  G                             
Sbjct: 131 IASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 187

Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKK 97
             +MPPE  L   F+ +SD++SFGV++ EI + GK+
Sbjct: 188 IRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQ 223

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 42.0 bits (98), Expect = 1e-04
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 40/111 (36%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL------------- 61
           NI  + LL+W V+      IA+G++YL +    R++HRDL A N+L+             
Sbjct: 105 NIGSQLLLNWCVQ------IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGL 155

Query: 62  -------------DSGYMPPEY-ALRGF----FSIKSDVFSFGVLMLEILS 94
                        D G MP ++ AL       F+ +SDV+S+GV + E+++
Sbjct: 156 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 206

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 45/130 (34%)

Query: 1   VCKKLVYSKLLDAANIDKKR-----LLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLK 55
           V + + Y  LLD    +K R     LL+W V+      IA+G+ YL +   +R++HRDL 
Sbjct: 86  VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQ------IAKGMSYLEE---VRLVHRDLA 136

Query: 56  ASNILL--------------------------DSG-----YMPPEYALRGFFSIKSDVFS 84
           A N+L+                          D G     +M  E  L   F+ +SDV+S
Sbjct: 137 ARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWS 196

Query: 85  FGVLMLEILS 94
           +GV + E+++
Sbjct: 197 YGVTVWELMT 206

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 37/145 (25%), Positives = 49/145 (33%), Gaps = 65/145 (44%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASN------------------ILLDSGYMP-------- 67
           + +G+ YL   +   +IHRDL A N                   +LD  Y          
Sbjct: 109 VCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPV 165

Query: 68  ----PEYALRGFFSIKSDVFSFGVLMLEILSGKK-------------------------- 97
               PE      +S KSDV+SFGVLM E+ S  K                          
Sbjct: 166 KWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRL 225

Query: 98  -STAVYNTGSFNLLGHAWDLWKDDR 121
            S +VY      L+ H W    +DR
Sbjct: 226 ASQSVY-----ELMQHCWKERPEDR 245

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 45/113 (39%)

Query: 16  IDKKRLL--DWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------- 63
           +D ++LL    Q        I +G+ YL      R +HRDL   NIL++S          
Sbjct: 105 LDHRKLLLYASQ--------ICKGMEYL---GSKRYVHRDLATRNILVESENRVKIGDFG 153

Query: 64  -----------------GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILS 94
                            G  P     PE      FS+ SDV+SFGV++ E+ +
Sbjct: 154 LTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 37/96 (38%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLD--SG--------------------------- 64
           I +GL YLH     +I+HRD+K  N+L++  SG                           
Sbjct: 117 ILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTL 173

Query: 65  -YMPPE---YALRGFFSIKSDVFSFGVLMLEILSGK 96
            YM PE      RG +   +D++S G  ++E+ +GK
Sbjct: 174 QYMAPEVIDKGPRG-YGAPADIWSLGCTIVEMATGK 208

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 60/176 (34%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------- 63
           ++ GIA G+ YL   S +  +HRDL A NIL++S                          
Sbjct: 112 MLRGIAAGMKYL---SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTS 168

Query: 64  -GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDL 116
            G +P     PE      F+  SDV+SFG++M E++S G++                WD+
Sbjct: 169 GGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPY--------------WDM 214

Query: 117 WKDDRVHELIDPVITQDEISLSMLM----RYVKVALLCVQETVADRPTMSDVVSMI 168
                 HE++  +   D   L   M       ++ L C Q+  A RP   D+V+++
Sbjct: 215 SN----HEVMKAI--NDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLL 264

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ YL  +     +H+DL A NIL+         D G                    
Sbjct: 133 IAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLP 189

Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
             +MPPE  + G FS  SD++SFGV++ EI S
Sbjct: 190 IRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 41.6 bits (97), Expect = 1e-04
 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 33/110 (30%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSGY- 65
           + + RL + Q+ A + E + Q L YLH      +IHRD+K+ +ILL         D G+ 
Sbjct: 109 VSQTRLNEEQI-ATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFC 164

Query: 66  -------------------MPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                              M PE   R  +  + D++S G++++E++ G+
Sbjct: 165 AQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGE 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 39/115 (33%)

Query: 19  KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------- 64
            R+LD  V       + +GL YLH +    I+HRD+K +NI LD                
Sbjct: 93  GRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKL 149

Query: 65  -------------------YMPPEYALRGFFSIK---SDVFSFGVLMLEILSGKK 97
                              YM PE    G        +D++S G ++LE+ +GK+
Sbjct: 150 KNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKR 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------Y 65
           I  GL YLH   R   +HRD+K +NIL+D+                             +
Sbjct: 111 ILLGLEYLH--DR-NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYW 167

Query: 66  MPPEYALR-GFFSIKSDVFSFGVLMLEILSGK 96
           M PE   + G + + +D++S G  +LE+ +GK
Sbjct: 168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGK 199

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 26/118 (22%), Positives = 37/118 (31%), Gaps = 56/118 (47%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------- 64
           A I+  +     YLH      IIHRDLK  NILLD                         
Sbjct: 109 AEILLALE----YLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESN 161

Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+ PE          SD+++ G ++ ++L+GK
Sbjct: 162 KGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK 219

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 32/98 (32%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------- 64
           A I+  I +GL YLH     R IHRD+KA+N+LL         D G              
Sbjct: 104 ATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160

Query: 65  ------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE   +  +  K+D++S G+  +E+  G+
Sbjct: 161 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 34/95 (35%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLD------------SG----------------Y 65
           I + L YL +  +  +IHRD+K SNILLD            SG                Y
Sbjct: 123 IVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAY 180

Query: 66  MPPEY----ALRGFFSIKSDVFSFGVLMLEILSGK 96
           M PE          + I++DV+S G+ ++E+ +G+
Sbjct: 181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 33/116 (28%)

Query: 7   YSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL----- 61
           Y  LLD      ++ ++  V   +   I+  + YL + +    IHRDL A N L+     
Sbjct: 86  YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHL 142

Query: 62  ----DSG---------------------YMPPEYALRGFFSIKSDVFSFGVLMLEI 92
               D G                     +  PE      FSIKSDV++FGVL+ EI
Sbjct: 143 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 198

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           +A G+ YL   S  + +HRDL   N L+         D G                    
Sbjct: 139 VAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIP 195

Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
             +MPPE      ++ +SDV+++GV++ EI S
Sbjct: 196 IRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 227

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 4/30 (13%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILL-DSG 64
           +GL YLH+      IHRD+K +NILL + G
Sbjct: 112 KGLAYLHE---TGKIHRDIKGANILLTEDG 138

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 33/96 (34%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---------------- 64
           II  +   L Y+H+     +IHRD+KA+NIL+         D G                
Sbjct: 106 IIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFV 162

Query: 65  ----YMPPEYALRG-FFSIKSDVFSFGVLMLEILSG 95
               +M PE    G ++  K+D++S G+ + E+ +G
Sbjct: 163 GTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATG 198

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   SR + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 183 VARGMEFLA--SR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239

Query: 75  ------------FFSIKSDVFSFGVLMLEILS 94
                        ++ +SDV+SFGVL+ EI S
Sbjct: 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFS 271

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 46/133 (34%)

Query: 8   SKLLDAANIDKKRLLDWQVRA-----------RIIEGIAQGLLYLHQYSRLRIIHRDLKA 56
           +K L A   D   L+D Q R             I   IA G++YL   +    +HRDL  
Sbjct: 95  NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLAT 151

Query: 57  SNILLDSG-------------------------------YMPPEYALRGFFSIKSDVFSF 85
            N L+ +                                +MPPE  +   F+ +SDV+SF
Sbjct: 152 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 211

Query: 86  GVLMLEILS-GKK 97
           GV++ EI + GK+
Sbjct: 212 GVILWEIFTYGKQ 224

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 36/94 (38%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           +A+G+ YL      + +HRDL A N +LD  +                            
Sbjct: 107 VAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAK 163

Query: 66  MPPEY-ALRGF----FSIKSDVFSFGVLMLEILS 94
           +P ++ AL       F+ KSDV+SFGVL+ E+++
Sbjct: 164 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 197

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 31/91 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------------------GY 65
           I  GL  LH   R RI++RDLK  NILLD                             GY
Sbjct: 111 ITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGY 167

Query: 66  MPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           M PE      ++   D +  G L+ E++ GK
Sbjct: 168 MAPEVVKNERYTFSPDWWGLGCLIYEMIEGK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 32/99 (32%)

Query: 37  GLLYLHQYSRLRIIHRDLKASNILLDSG-----------------------------YMP 67
           GL +LH     +I+HRD+K+ N+ LD+                              Y+ 
Sbjct: 113 GLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLS 169

Query: 68  PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGS 106
           PE      ++ KSDV++ GV++ E  +GK      N G+
Sbjct: 170 PELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA 208

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 36/93 (38%)

Query: 35  AQGLLYLHQYSRLRIIHRDLKASNILLD------------------------SG------ 64
           A G+ YL   +    IHRDL A N L+                          G      
Sbjct: 103 AAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPI 159

Query: 65  -YMPPEYALR-GFFSIKSDVFSFGVLMLEILSG 95
            +  PE AL  G ++ +SDV+S+G+L+ E  S 
Sbjct: 160 KWTAPE-ALNYGRYTSESDVWSYGILLWETFSL 191

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 39.9 bits (93), Expect = 4e-04
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 31/91 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLD----------------------------SGY 65
           I  G+L+LH    + I++RD+K  N+LLD                            +GY
Sbjct: 104 ITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGY 160

Query: 66  MPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           M PE      +S   D F+ G  + E+++G+
Sbjct: 161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 39.6 bits (92), Expect = 5e-04
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 29/87 (33%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------------------DSGYMP----- 67
           + + + YL   +    +HRDL A N+L+                     D+G +P     
Sbjct: 111 VCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA 167

Query: 68  PEYALRGFFSIKSDVFSFGVLMLEILS 94
           PE      FS KSDV+SFG+L+ EI S
Sbjct: 168 PEALREKKFSTKSDVWSFGILLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 39.9 bits (93), Expect = 6e-04
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL-------------------DSGY--------- 65
           +A+G+ +L   +    IHRDL A NILL                   DS Y         
Sbjct: 223 VAKGMSFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLP 279

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M PE      ++ +SDV+S+G+L+ EI S
Sbjct: 280 VKWMAPESIFNCVYTFESDVWSYGILLWEIFS 311

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 32/113 (28%)

Query: 12  DAANIDK-KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNI---------LL 61
           D  NI K ++L D  ++  ++  I +GL Y+H      IIHRDLK SNI         +L
Sbjct: 105 DLNNIVKCQKLSDDHIQF-LVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKIL 160

Query: 62  DSG-----------------YMPPEYAL-RGFFSIKSDVFSFGVLMLEILSGK 96
           D G                 Y  PE  L    ++   D++S G +M E+L+GK
Sbjct: 161 DFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGK 213

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 39.4 bits (92), Expect = 6e-04
 Identities = 30/101 (29%), Positives = 39/101 (38%), Gaps = 34/101 (33%)

Query: 27  RARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------------- 64
             R+   IA+ +L L    +L II+RD+K  NILLDS                       
Sbjct: 106 EVRVY--IAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERA 163

Query: 65  --------YMPPEYALRGF--FSIKSDVFSFGVLMLEILSG 95
                   YM PE    G        D +S GVL  E+L+G
Sbjct: 164 YSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 3/34 (8%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
            +  + +G+ YLH+     I+HRD+KA+NIL+D+
Sbjct: 120 YMLQLLEGINYLHEN---HILHRDIKAANILIDN 150

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 39.7 bits (92), Expect = 6e-04
 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 32/104 (30%)

Query: 22  LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------- 64
           LD    A I+  I +GL YLH   +   IHRD+KA+N+LL         D G        
Sbjct: 98  LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 154

Query: 65  ------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                       +M PE   +  +  K+D++S G+  +E+  G+
Sbjct: 155 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 39.6 bits (92), Expect = 6e-04
 Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 31/91 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------------------GY 65
           I  GL  LHQ    RI++RDLK  NILLD                             GY
Sbjct: 111 ICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGY 167

Query: 66  MPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           M PE      ++   D ++ G L+ E+++G+
Sbjct: 168 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 39.1 bits (91), Expect = 7e-04
 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 28/103 (27%)

Query: 29  RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL--------DSG---------------- 64
           ++ E   Q LL +H   + RI+HRDLKA NI L        D G                
Sbjct: 107 QVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATTFT 166

Query: 65  ----YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
               YM PE      +  KSD++S G ++ E+     +    N
Sbjct: 167 GTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN 209

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 39.6 bits (92), Expect = 7e-04
 Identities = 45/165 (27%), Positives = 63/165 (38%), Gaps = 53/165 (32%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           +A+G+ YL   +  + IHRDL A N+L+         D G                    
Sbjct: 146 VARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLP 202

Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEI--LSGKKSTAVYNTGSFNLLGHAWDLWKDD 120
             +M PE      ++ +SDV+SFGVLM EI  L G     +     F LL          
Sbjct: 203 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG------- 255

Query: 121 RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVV 165
             H +  P    +E  L M+MR       C     + RPT   +V
Sbjct: 256 --HRMDKPANCTNE--LYMMMRD------CWHAIPSHRPTFKQLV 290

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 29/88 (32%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------------------YMP 67
           +   L YLH    L I++RDLK  N+LLDS                           Y+ 
Sbjct: 110 VVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLA 166

Query: 68  PEYALRGFFSIKSDVFSFGVLMLEILSG 95
           PE  L   +    D ++ G+L+ E+L+G
Sbjct: 167 PEIILSKGYGKAVDWWALGILIYEMLAG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 22/40 (55%), Positives = 24/40 (60%), Gaps = 4/40 (10%)

Query: 25  QVRARIIEG-IAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           + RAR     IA  L YLH    L II+RDLK  NILLDS
Sbjct: 95  EPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDS 131

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 38.9 bits (90), Expect = 0.001
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 34/96 (35%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---------------- 64
           I+  IA G+ +L   S   ++H+DL   N+L+         D G                
Sbjct: 129 IVTQIAAGMEFL---SSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGN 185

Query: 65  ------YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                 +M PE  + G FSI SD++S+GV++ E+ S
Sbjct: 186 SLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 38.9 bits (90), Expect = 0.001
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 32/98 (32%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------- 64
           A +++ I +GL YLH   +   IHRD+KA+N+LL         D G              
Sbjct: 104 ATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160

Query: 65  ------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE   +  +  K+D++S G+  +E+  G+
Sbjct: 161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 35/93 (37%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------------------GYM 66
           I +G+ YLH       IHRDL A N+LLD+                           G  
Sbjct: 116 ICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 172

Query: 67  P-----PEYALRGFFSIKSDVFSFGVLMLEILS 94
           P      E      FS  SDV+SFGV + E+L+
Sbjct: 173 PVFWYAVECLKENKFSYASDVWSFGVTLYELLT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 42/175 (24%), Positives = 68/175 (38%), Gaps = 58/175 (33%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------GYMP--------------- 67
           ++ G+A G+ YL   S +  +H+ L A  +L++S       G+                 
Sbjct: 112 MLPGLASGMKYL---SEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSG 168

Query: 68  --------PEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWK 118
                   PE      FS  SDV+SFG++M E++S G++                WD+  
Sbjct: 169 KSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPY--------------WDMSG 214

Query: 119 DDRVHELID----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS 169
            D +  + D    P        L  LM      L C Q+   +RP  S + S++S
Sbjct: 215 QDVIKAVEDGFRLPAPRNCPNLLHQLM------LDCWQKERGERPRFSQIHSILS 263

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 43/170 (25%), Positives = 67/170 (39%), Gaps = 61/170 (35%)

Query: 5   LVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG 64
           L+YS+L D       + L  Q+  + +  IA G+ YL   S    IHRDL A N +L+  
Sbjct: 97  LLYSRLGDCP-----QYLPTQMLVKFMTDIASGMEYL---SSKSFIHRDLAARNCMLNEN 148

Query: 65  Y--------------------------MPPEY-ALRGF----FSIKSDVFSFGVLMLEIL 93
                                      MP ++ A+       ++ KSDV+SFGV M EI 
Sbjct: 149 MNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIA 208

Query: 94  S-------GKKSTAVYN---------------TGSFNLLGHAWDLWKDDR 121
           +       G +++ +Y+                G ++L+   W L   DR
Sbjct: 209 TRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDR 258

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 47/178 (26%), Positives = 68/178 (38%), Gaps = 60/178 (33%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           +A+G+ YL   +  + IHRDL A N+L+         D G                    
Sbjct: 149 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 205

Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEI--LSGKKSTAVYNTGSFNLLGHAWDLWKDD 120
             +M PE      ++ +SDV+SFGVL+ EI  L G     V     F LL          
Sbjct: 206 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG------- 258

Query: 121 RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVV-------SMISNE 171
             H +  P    +E  L M+MR       C     + RPT   +V       ++ SN+
Sbjct: 259 --HRMDKPSNCTNE--LYMMMRD------CWHAVPSQRPTFKQLVEDLDRILALTSNQ 306

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 45/117 (38%)

Query: 12  DAANIDKKRLLDWQVRARIIEGIAQGLLYL--HQYSRLRIIHRDLKASNILL-------- 61
           +   I+ K+ L + V+      I +G+ YL   QY     +HRDL A N+L+        
Sbjct: 102 NKNKINLKQQLKYAVQ------ICKGMDYLGSRQY-----VHRDLAARNVLVESEHQVKI 150

Query: 62  -----------DSGYM-------------PPEYALRGFFSIKSDVFSFGVLMLEILS 94
                      D  Y               PE  ++  F I SDV+SFGV + E+L+
Sbjct: 151 GDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------------------G 64
           I  GL +LH+     II+RDLK  N+LLD                               
Sbjct: 105 IICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPD 161

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           Y+ PE      ++   D +SFGVL+ E+L G+
Sbjct: 162 YIAPEILKGQKYNESVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 38.3 bits (90), Expect = 0.002
 Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 32/108 (29%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY------------ 65
           K +     V   II  I QGL ++H   +    HRDLK  N+L+                
Sbjct: 92  KGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLARE 148

Query: 66  ---MP-------------PEYALR-GFFSIKSDVFSFGVLMLEILSGK 96
               P             PE  LR   +S   D+++ G +M E+ + +
Sbjct: 149 IRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLR 196

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 38.3 bits (90), Expect = 0.002
 Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 3/27 (11%)

Query: 37  GLLYLHQYSRLRIIHRDLKASNILLDS 63
           GL YLH      +IHRDLK SNIL++S
Sbjct: 115 GLKYLH---SANVIHRDLKPSNILVNS 138

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 3/34 (8%)

Query: 29  RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD 62
           ++++ +  GL Y+H   R +I+HRD+KA+NIL+ 
Sbjct: 123 KVMKMLLNGLYYIH---RNKILHRDMKAANILIT 153

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 32/113 (28%)

Query: 12  DAANIDK-KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNI---------LL 61
           D  NI K ++L D  V+  I + I +GL Y+H      IIHRDLK SN+         +L
Sbjct: 107 DLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKIL 162

Query: 62  DSG-----------------YMPPEYALRGF-FSIKSDVFSFGVLMLEILSGK 96
           D G                 Y  PE  L    ++   D++S G +M E+L+G+
Sbjct: 163 DFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 39/187 (20%), Positives = 71/187 (37%), Gaps = 48/187 (25%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL-------- 61
           L D     K +L + ++    +  I   + Y+H+     I+HRD+K  NI L        
Sbjct: 86  LYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKL 142

Query: 62  -DSG--------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTA 100
            D G                    YM PE      ++ KSD+++ G ++ E+L+ K++  
Sbjct: 143 GDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFD 202

Query: 101 VYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPT 160
                + N L     + + +       PV++     L  L+         +Q+    RPT
Sbjct: 203 -----ATNPLNLVVKIVQGNYT-----PVVSVYSSELISLVHS------LLQQDPEKRPT 246

Query: 161 MSDVVSM 167
             +V+  
Sbjct: 247 ADEVLDQ 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 32/91 (35%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           I+  L +LHQ     II+RDLK  NILLD+                              
Sbjct: 109 ISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIE 165

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
           YM PE  +R       D +S G LM ++L+G
Sbjct: 166 YMAPEILMRSGHGKAVDWWSLGALMYDMLTG 196

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 32/90 (35%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILL---------DSGY--------------------M 66
           Q L +LH     ++IHRD+K+ NILL         D G+                    M
Sbjct: 126 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM 182

Query: 67  PPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
            PE   R  +  K D++S G++ +E++ G+
Sbjct: 183 APEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 37.9 bits (89), Expect = 0.002
 Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 3/24 (12%)

Query: 40  YLHQYSRLRIIHRDLKASNILLDS 63
           Y+H  S   +IHRDLK SNILL+S
Sbjct: 122 YIH--SG-NVIHRDLKPSNILLNS 142

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 37/91 (40%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILL---------DSG--------------------YM 66
           + L +LH +   ++IHRDLKA NILL         D G                    +M
Sbjct: 114 EALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWM 170

Query: 67  PPEYALRGFFS-----IKSDVFSFGVLMLEI 92
            PE      F       K+D++S G+ ++E+
Sbjct: 171 APEVVACETFKDNPYDYKADIWSLGITLIEL 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 40/111 (36%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL------------- 61
           NI  + LL+W V+      IA+G+ YL +    R++HRDL A N+L+             
Sbjct: 105 NIGSQYLLNWCVQ------IAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGL 155

Query: 62  -------------DSG-----YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                        + G     +M  E  L   ++ +SDV+S+GV + E+++
Sbjct: 156 AKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 206

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 34/95 (35%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL------------------DSGY---------- 65
           ++  L YL      R +HRD+ A N+L+                  D  Y          
Sbjct: 116 LSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPI 172

Query: 66  --MPPEYALRGFFSIKSDVFSFGVLMLEILS-GKK 97
             M PE      F+  SDV+ FGV M EIL  G K
Sbjct: 173 KWMAPESINFRRFTSASDVWMFGVCMWEILMLGVK 207

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 34/111 (30%)

Query: 16  IDKKRLLDWQVRARIIEG-IAQGLLYLHQYSRLRIIHRDLKASNILLDS----------- 63
           I + R  D + R+R     +   L++LH++    +I+RDLK  NILLD+           
Sbjct: 87  IQRSRKFD-EPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGM 142

Query: 64  ------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                              Y+ PE      +    D ++ GVLM E+++G+
Sbjct: 143 CKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------------------G 64
           I+ GL +LH   R  II+RDLK  N++LDS                              
Sbjct: 110 ISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPD 166

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           Y+ PE      +    D +++GVL+ E+L+G+
Sbjct: 167 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 37.0 bits (86), Expect = 0.003
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 32/104 (30%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---- 64
           +KRL+  +   +    +   L ++H     RI+HRD+K +N+ +         D G    
Sbjct: 99  QKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRF 155

Query: 65  ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEI 92
                           YM PE      ++ KSD++S G L+ E+
Sbjct: 156 FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------------------G 64
           IA GL +LH      II+RDLK  N++LDS                              
Sbjct: 110 IAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPD 166

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           Y+ PE      +    D ++FGVL+ E+L+G+
Sbjct: 167 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 12/43 (27%)

Query: 19  KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL 61
           K LL WQ        I  G+ YLH      ++HRDLK +NIL+
Sbjct: 111 KSLL-WQ--------ILNGVHYLHSN---WVLHRDLKPANILV 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 37.2 bits (87), Expect = 0.004
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 3/28 (10%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDS 63
           +GL YLH      I+HRDLK +N+L+ S
Sbjct: 113 RGLEYLHSNW---ILHRDLKPNNLLIAS 137

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 37.0 bits (85), Expect = 0.004
 Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 35/101 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           I +G+ YLH      I+HRD+K +NIL DS                              
Sbjct: 115 ILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTG 171

Query: 65  ---YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVY 102
              +M PE      +  K+DV+S G  ++E+L+ K   A Y
Sbjct: 172 TPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY 212

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           A I++ +   L Y+H       IHR +KAS+ILL  
Sbjct: 104 AFILKDVLNALDYIHS---KGFIHRSVKASHILLSG 136

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 36.8 bits (85), Expect = 0.004
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 29/82 (35%)

Query: 42  HQYSRLRIIHRDLKASNILLDS---------------------------GYMPPEYALRG 74
           H ++R  +++RDLK +NILLD                            GYM PE   +G
Sbjct: 112 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKG 170

Query: 75  F-FSIKSDVFSFGVLMLEILSG 95
             +   +D FS G ++ ++L G
Sbjct: 171 VAYDSSADWFSLGCMLFKLLRG 192

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 37.0 bits (85), Expect = 0.004
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 32/90 (35%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILL---------DSGY--------------------M 66
           Q L +LH     ++IHRD+K+ NILL         D G+                    M
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM 183

Query: 67  PPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
            PE   R  +  K D++S G++ +E++ G+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	216
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.97
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.97
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.97
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.96
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.96
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.95
KOG0198	313	consensus MEKK and related serine/threonine protei	99.95
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.95
KOG0578	550	consensus p21-activated serine/threonine protein k	99.95
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.95
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.95
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.95
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.95
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.95
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.95
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.95
PHA02988	283	hypothetical protein; Provisional	99.94
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.94
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.94
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.94
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.94
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.94
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.94
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.94
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.94
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.94
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.94
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.94
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.94
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.94
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.94
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.94
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.94
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.94
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.94
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.94
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.94
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.94
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.94
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.94
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.94
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.94
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.94
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.94
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.94
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.94
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.94
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.93
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.93
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.93
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.93
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.93
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.93
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.93
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.93
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.93
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.93
PTZ00036	440	glycogen synthase kinase; Provisional	99.93
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.93
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.93
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.93
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.93
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.93
PTZ00284	467	protein kinase; Provisional	99.93
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.93
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.93
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.93
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.93
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.93
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.93
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.93
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.93
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.93
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.93
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.93
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.93
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.93
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.93
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.93
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.93
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.93
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.93
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.93
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.93
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.93
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.93
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.93
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.93
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.93
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.93
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.93
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.93
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.93
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.93
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.93
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.93
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.93
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.93
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.93
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.93
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.93
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.93
PTZ00283	496	serine/threonine protein kinase; Provisional	99.93
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.93
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.93
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.93
PHA03209	357	serine/threonine kinase US3; Provisional	99.93
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.93
PHA03211	461	serine/threonine kinase US3; Provisional	99.93
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.93
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.93
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.93
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.93
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.93
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.93
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.93
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.93
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.93
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.93
PHA03207	392	serine/threonine kinase US3; Provisional	99.93
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.93
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.92
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.92
PTZ00267	478	NIMA-related protein kinase; Provisional	99.92
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.92
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.92
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.92
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.92
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.92
PHA03212	391	serine/threonine kinase US3; Provisional	99.92
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.92
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.92
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.92
PHA02882	294	putative serine/threonine kinase; Provisional	99.92
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.92
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.92
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.92
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.92
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.92
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.92
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.92
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.92
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.92
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.92
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.92
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.92
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.92
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.92
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.92
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.92
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.92
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.92
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.92
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.92
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.92
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.92
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.92
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.92
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.92
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.92
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.92
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.92
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.92
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.92
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.92
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.92
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.92
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.92
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.92
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.92
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.92
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.92
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.92
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.92
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.92
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.92
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.92
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.92
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.92
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.92
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.92
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.92
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.92
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.92
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.92
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.92
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.92
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.92
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.92
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.92
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.92
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.92
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.92
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.92
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.92
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.92
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.92
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.92
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.91
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.91
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.91
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.91
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.91
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.91
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.91
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.91
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.91
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.91
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.91
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.91
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.91
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.91
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.91
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.91
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.91
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.91
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.91
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.91
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.91
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.91
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.91
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.91
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.91
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.91
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.91
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.91
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.91
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.91
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.91
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.91
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.91
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.91
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.91
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.91
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.91
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.91
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.91
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.91
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.91
KOG0605	550	consensus NDR and related serine/threonine kinases	99.91
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.91
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.91
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.91
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.91
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.91
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.91
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.91
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.91
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.91
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.91
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.91
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.91
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.91
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.91
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.91
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.91
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.91
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.91
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.91
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.91
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.91
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.91
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.91
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.9
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.9
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.9
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.9
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.9
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.9
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.9
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.9
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.9
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.9
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.9
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.9
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.9
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.9
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.9
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.9
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.9
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.9
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.9
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.9
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.9
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.9
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.9
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.9
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.9
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.9
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.9
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.9
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.9
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.9
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.9
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.9
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.9
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.9
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.9
KOG0589	426	consensus Serine/threonine protein kinase [General	99.9
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.9
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.9
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.9
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.9
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.9
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.9
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.9
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.9
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.9
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.9
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.9
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.89
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.89
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.89
PHA03210	501	serine/threonine kinase US3; Provisional	99.89
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.89
KOG0584	632	consensus Serine/threonine protein kinase [General	99.89
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.89
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.89
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.89
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.89
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.89
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.89
PLN00009	294	cyclin-dependent kinase A; Provisional	99.89
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.89
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.89
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.89
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.89
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.89
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.89
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.89
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.89
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.89
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.89
KOG3653	534	consensus Transforming growth factor beta/activin	99.89
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.89
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.89
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.89
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.89
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.89
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.89
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.89
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.88
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.88
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.88
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.88
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.88
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.88
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.88
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.88
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.88
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.88
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.88
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.88
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.88
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.88
KOG0610	459	consensus Putative serine/threonine protein kinase	99.88
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.87
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.87
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.87
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.87
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.87
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.87
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.87
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.86
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.86
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.86
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.86
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.86
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.86
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.86
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.85
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.85
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.85
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.84
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.84
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.84
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.83
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.82
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.81
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.81
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.81
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.81
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.81
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.81
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.8
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.8
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.79
KOG0586	596	consensus Serine/threonine protein kinase [General	99.78
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.78
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.78
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.78
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.77
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.76
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.76
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.76
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.74
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.73
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.73
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.73
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.71
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.71
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.62
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.61
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.59
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.59
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.55
KOG1152	772	consensus Signal transduction serine/threonine kin	99.51
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.45
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.44
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.42
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.41
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.32
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.22
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.19
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.12
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.04
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.03
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.97
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.94
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.91
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.88
PRK09188	365	serine/threonine protein kinase; Provisional	98.74
PRK12274	218	serine/threonine protein kinase; Provisional	98.67
smart00090	237	RIO RIO-like kinase.	98.55
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.52
PRK10345	210	hypothetical protein; Provisional	98.48
COG4248	637	Uncharacterized protein with protein kinase and he	98.46
PRK14879	211	serine/threonine protein kinase; Provisional	98.33
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.25
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.23
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.21
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.2
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.19
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.19
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.1
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.04
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.01
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.99
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.94
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.91
KOG3087	229	consensus Serine/threonine protein kinase [General	97.58
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.54
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.53
KOG1243	690	consensus Protein kinase [General function predict	97.48
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.38
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.26
PF11883	48	DUF3403: Domain of unknown function (DUF3403); Int	97.26
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.06
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	96.9
PRK09902	216	hypothetical protein; Provisional	96.88
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	96.43
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.17
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.12
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	94.76
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	94.45
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	94.39
COG0478	304	RIO-like serine/threonine protein kinase fused to	93.58
KOG1235	538	consensus Predicted unusual protein kinase [Genera	90.32
KOG0576	829	consensus Mitogen-activated protein kinase kinase	83.82
KOG1093	725	consensus Predicted protein kinase (contains TBC a	83.49
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	82.46
COG0661	517	AarF Predicted unusual protein kinase [General fun	80.2

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-33  Score=230.36  Aligned_cols=170  Identities=39%  Similarity=0.661  Sum_probs=148.8

Q ss_pred             eeeeecc----cccccccCCCC-CCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKR-LLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ++|||||    +|++.+..... .++|.++.+|+.++|.||+|||....++|||||||++|||+|.              
T Consensus       147 ~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~  226 (361)
T KOG1187|consen  147 RLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKL  226 (361)
T ss_pred             EEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCccc
Confidence            7899999    88888565555 8999999999999999999999988889999999999999983              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCC-CCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN-TGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      +|++||+...+..+.++||||||+++.|+++|+++.+... .....+..|.+..+..+.+.+++
T Consensus       227 ~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eii  306 (361)
T KOG1187|consen  227 GPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIV  306 (361)
T ss_pred             CCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhhee
Confidence                            3899999998899999999999999999999998877654 33446889999999998999999


Q ss_pred             ccccccchhh-HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          127 DPVITQDEIS-LSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       127 ~~~~~~~~~~-~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      |+.+...... .+...++..++.+|++.+|..||+|.||++.|+.+.
T Consensus       307 D~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  307 DPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             CCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence            9998743333 257888999999999999999999999999996543

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.97  E-value=4.1e-31  Score=216.54  Aligned_cols=156  Identities=30%  Similarity=0.411  Sum_probs=125.5

Q ss_pred             eeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            4 KLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .+||||    +|..+... .++.+++..++.++.||+.||.|||++++  |||||+|+.|||++..              
T Consensus       116 ~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~  193 (362)
T KOG0192|consen  116 CIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSRE  193 (362)
T ss_pred             EEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCcccee
Confidence            589999    88888555 47889999999999999999999999873  9999999999999762              


Q ss_pred             ----------------CCChhhhh--cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 ----------------YMPPEYAL--RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 ----------------y~aPE~~~--~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      |+|||++.  +..|+.++||||||+++|||+||+.||.......     .+....     ....
T Consensus       194 ~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~-----~~~~v~-----~~~~  263 (362)
T KOG0192|consen  194 KVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ-----VASAVV-----VGGL  263 (362)
T ss_pred             eccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH-----HHHHHH-----hcCC
Confidence                            99999999  5699999999999999999999999987655411     111111     1111


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                      .+.++..     +...+..++.+||+.||+.||++.+++..|+.+.....
T Consensus       264 Rp~~p~~-----~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~  308 (362)
T KOG0192|consen  264 RPPIPKE-----CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS  308 (362)
T ss_pred             CCCCCcc-----CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence            2222222     66779999999999999999999999999997755543

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.97  E-value=3.5e-31  Score=209.90  Aligned_cols=151  Identities=25%  Similarity=0.400  Sum_probs=118.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ..++|||    +|+++.... +.+++...-+++++|++||.|||. .+   ||||||||+|+|++.              
T Consensus       153 isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~  228 (364)
T KOG0581|consen  153 ISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGI  228 (364)
T ss_pred             EEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHH
Confidence            4789999    888884433 669999999999999999999996 55   999999999999986              


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                   .|||||.+.+..|+.++||||||++++|+.+|+-|+.............         +..+.+...
T Consensus       229 lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~L---------l~~Iv~~pp  299 (364)
T KOG0581|consen  229 LVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFEL---------LCAIVDEPP  299 (364)
T ss_pred             hhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHH---------HHHHhcCCC
Confidence                         2999999999999999999999999999999999987552222211111         111222111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      +..+.. .+++++.+|+..|+++||.+||++.|++++
T Consensus       300 P~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  300 PRLPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             CCCCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            111111 378889999999999999999999999854

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=6.3e-31  Score=216.70  Aligned_cols=152  Identities=29%  Similarity=0.358  Sum_probs=121.7

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      -||||||    +|.+++.. ....+...+.+.++.|||+|++||.+++   +||||+.++|||++.+             
T Consensus       276 iyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~  352 (468)
T KOG0197|consen  276 IYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARL  352 (468)
T ss_pred             eEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccc
Confidence            3899999    77777554 6677999999999999999999999999   9999999999999873             


Q ss_pred             -----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 -----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 -----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       |.|||.+....|+.++||||||+++||++| |+.|+......               +..+.+
T Consensus       353 ~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~---------------ev~~~l  417 (468)
T KOG0197|consen  353 IGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE---------------EVLELL  417 (468)
T ss_pred             cCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH---------------HHHHHH
Confidence                             999999999999999999999999999998 66664322111               111111


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                      +..... +.|..|+..+.++|..||+.+|++|||+..+...|++...
T Consensus       418 e~GyRl-p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~  463 (468)
T KOG0197|consen  418 ERGYRL-PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT  463 (468)
T ss_pred             hccCcC-CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence            111111 1222278889999999999999999999999999987643

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.96  E-value=2e-29  Score=195.53  Aligned_cols=159  Identities=16%  Similarity=0.228  Sum_probs=119.9

Q ss_pred             eeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC----------------
Q 040682            4 KLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------   64 (216)
Q Consensus         4 ~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~----------------   64 (216)
                      +|||||   ++-+.+.....+++...+++++.|++.|+.|+|+++   ||||||||+|||++..                
T Consensus        77 hLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~  153 (396)
T KOG0593|consen   77 HLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSA  153 (396)
T ss_pred             EEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcC
Confidence            799999   333334666778999999999999999999999999   9999999999999862                


Q ss_pred             -------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchh----------hhhhhhhccC
Q 040682           65 -------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLL----------GHAWDLWKDD  120 (216)
Q Consensus        65 -------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~----------~~~~~~~~~~  120 (216)
                                   |+|||.+.++ .|...+|||++||++.||++|.+.|++..+....+.          .+..-+..+.
T Consensus       154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~  233 (396)
T KOG0593|consen  154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP  233 (396)
T ss_pred             CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence                         9999999985 899999999999999999999999988776543111          1111111111


Q ss_pred             cccccccccccc-----chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          121 RVHELIDPVITQ-----DEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       121 ~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .+..+.-|.+..     ...+. ...-+++++..|++.||++|++.+|++.
T Consensus       234 ~F~Gv~lP~~~~~epLe~k~p~-~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  234 FFHGVRLPEPEHPEPLERKYPK-ISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             ceeeeecCCCCCccchhhhccc-chHHHHHHHHHHhcCCccccccHHHHhc
Confidence            122222222211     12222 4557899999999999999999999874

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3e-29  Score=204.26  Aligned_cols=164  Identities=21%  Similarity=0.207  Sum_probs=126.0

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      +-|+||||   +|+.+...+.+.|++.+++.|+.||++||+|+|.+|   +.|||+||+|||+...              
T Consensus        84 ~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev  160 (538)
T KOG0661|consen   84 ILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREV  160 (538)
T ss_pred             eEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccc
Confidence            35899999   999996666889999999999999999999999999   9999999999999841              


Q ss_pred             --------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhhhhhhcc------Ccc
Q 040682           65 --------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHAWDLWKD------DRV  122 (216)
Q Consensus        65 --------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~~~~~~~------~~~  122 (216)
                                    |+|||++... -|+.+.|||++||+++|+.+=++.|.+..+.+. .....+......      ..+
T Consensus       161 ~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L  240 (538)
T KOG0661|consen  161 RSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL  240 (538)
T ss_pred             ccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence                          9999988755 789999999999999999999999988776543 111111111111      112


Q ss_pred             ccccccccccc-------hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          123 HELIDPVITQD-------EISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       123 ~~~~~~~~~~~-------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      ...++-..+..       -.+. ++.++++++.+|+.+||++||++.|++++--
T Consensus       241 a~~mnf~~P~~~~~~l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~pf  293 (538)
T KOG0661|consen  241 ASAMNFRFPQVKPSPLKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQHPF  293 (538)
T ss_pred             HHHhccCCCcCCCCChHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcCcc
Confidence            22222111111       1222 6788999999999999999999999987643

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.95  E-value=4.3e-28  Score=223.09  Aligned_cols=169  Identities=24%  Similarity=0.403  Sum_probs=133.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|+++..    .++|.++..++.|++.||+|||+.+.++++|||+||+||+++.               
T Consensus       758 ~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~  833 (968)
T PLN00113        758 AYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLC  833 (968)
T ss_pred             CEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccc
Confidence            5899999    6777642    3899999999999999999999665556999999999999864               


Q ss_pred             ---------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccc-
Q 040682           64 ---------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQD-  133 (216)
Q Consensus        64 ---------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  133 (216)
                               .|+|||++.+..++.++|||||||++||+++|+.|+............|.............+++.+... 
T Consensus       834 ~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  913 (968)
T PLN00113        834 TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV  913 (968)
T ss_pred             cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC
Confidence                     3999999999999999999999999999999999986544444445555544444444444455544322 


Q ss_pred             hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          134 EISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       134 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ..+.+...++.+++.+||+.+|++||++.||++.|++.....
T Consensus       914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~  955 (968)
T PLN00113        914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS  955 (968)
T ss_pred             CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence            223345677899999999999999999999999999864433

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=5.5e-29  Score=198.99  Aligned_cols=153  Identities=26%  Similarity=0.325  Sum_probs=117.5

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-C------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-G------------   64 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-~------------   64 (216)
                      ..+++|||    +|.++..+..+.|++..++.+++|+++||+|||+++   ++||||||+|||++. +            
T Consensus        90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~  166 (313)
T KOG0198|consen   90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAK  166 (313)
T ss_pred             eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccc
Confidence            35789999    888875555447999999999999999999999999   999999999999976 2            


Q ss_pred             --------------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           65 --------------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        65 --------------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                          |+|||++.+. ....++||||+||++.||+||.+||.....    ...+........   
T Consensus       167 ~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~----~~~~~~~ig~~~---  239 (313)
T KOG0198|consen  167 KLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE----EAEALLLIGRED---  239 (313)
T ss_pred             ccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc----hHHHHHHHhccC---
Confidence                                9999999953 334599999999999999999999865410    011111111111   


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                        ..|     ..+...+.+..+|+..|++.+|++|||+.+++++..-.
T Consensus       240 --~~P-----~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~  280 (313)
T KOG0198|consen  240 --SLP-----EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK  280 (313)
T ss_pred             --CCC-----CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence              112     22222567789999999999999999999999876653

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.95  E-value=1.1e-28  Score=205.05  Aligned_cols=151  Identities=25%  Similarity=0.393  Sum_probs=121.5

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      |.-+||||    -|..+ .+..+.++......|..+||.|+.|||.+.   |||||+|.-|||++.+             
T Consensus       186 cyCIiMEfCa~GqL~~V-Lka~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e  261 (904)
T KOG4721|consen  186 CYCIIMEFCAQGQLYEV-LKAGRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKE  261 (904)
T ss_pred             eeEEeeeccccccHHHH-HhccCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHh
Confidence            67799999    55555 445567899999999999999999999987   9999999999999752             


Q ss_pred             ---------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           65 ---------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        65 ---------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                     |||||++...+.+.++|||||||||||||||..|+..-+...     .+|.          +-..
T Consensus       262 ~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA-----IIwG----------VGsN  326 (904)
T KOG4721|consen  262 LSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA-----IIWG----------VGSN  326 (904)
T ss_pred             hhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe-----eEEe----------ccCC
Confidence                           999999999999999999999999999999999975333221     1111          1111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ....+.+..|+..++-|+.+||+-.|..||++.+++.+|+--
T Consensus       327 sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  327 SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             cccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence            112233444788899999999999999999999999999853

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.4e-28  Score=203.94  Aligned_cols=146  Identities=24%  Similarity=0.299  Sum_probs=116.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      -|.||||    +|-++  .....+++.++..|++++++||+|||.++   |||||||..|||++.+              
T Consensus       345 LWVVMEym~ggsLTDv--Vt~~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi  419 (550)
T KOG0578|consen  345 LWVVMEYMEGGSLTDV--VTKTRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQI  419 (550)
T ss_pred             eEEEEeecCCCchhhh--hhcccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeecc
Confidence            4899999    55554  44455999999999999999999999999   9999999999999752              


Q ss_pred             ---------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           65 ---------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        65 ---------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                     |+|||+.....|..+.||||||++.+||+.|++||...+.-.     .         +.-+.+..
T Consensus       420 ~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr-----A---------lyLIa~ng  485 (550)
T KOG0578|consen  420 SEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-----A---------LYLIATNG  485 (550)
T ss_pred             ccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH-----H---------HHHHhhcC
Confidence                           999999999999999999999999999999999985321110     0         00111111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .+....+...+..+.+|+.+||+.|+.+|++++|+|++
T Consensus       486 ~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  486 TPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             CCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            11222333478889999999999999999999999864

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.95  E-value=7.7e-28  Score=181.93  Aligned_cols=154  Identities=21%  Similarity=0.255  Sum_probs=120.5

Q ss_pred             eeeeecc----ccccc---ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-----------
Q 040682            3 KKLVYSK----LLDAA---NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-----------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-----------   64 (216)
                      -|||+.|    +|.+.   ...++..+++.+++.|+.++++||.+||+.. ++++||||||.|||+...           
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~  176 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSA  176 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCc
Confidence            5889999    44444   3344557999999999999999999999985 689999999999999761           


Q ss_pred             ---------------------------CCChhhhh---cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhh
Q 040682           65 ---------------------------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAW  114 (216)
Q Consensus        65 ---------------------------y~aPE~~~---~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~  114 (216)
                                                 |+|||.+.   +...+.++|||||||++|.|+.|..||+..-.          
T Consensus       177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~----------  246 (302)
T KOG2345|consen  177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ----------  246 (302)
T ss_pred             cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh----------
Confidence                                       99999886   34678999999999999999999999863322          


Q ss_pred             hhhccCccc-cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          115 DLWKDDRVH-ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       115 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                         .++.+. .+.++.+.-...+. .++.+.+++..|++.||.+||++.+++..++++
T Consensus       247 ---~GgSlaLAv~n~q~s~P~~~~-yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  247 ---QGGSLALAVQNAQISIPNSSR-YSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             ---cCCeEEEeeeccccccCCCCC-ccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence               112121 22222332222222 788899999999999999999999999998875

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.95  E-value=1e-27  Score=207.33  Aligned_cols=154  Identities=20%  Similarity=0.210  Sum_probs=124.8

Q ss_pred             eeeeecc----ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      -+|+|||    .|-++ ..+.+..|++.++++|+.|+|+|+++||... ++|||||||.+|||+..+             
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSatt  195 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSATT  195 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCccccccc
Confidence            4788999    44444 4455556999999999999999999999984 899999999999999762             


Q ss_pred             -------------------------CCChhhhh---cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhh
Q 040682           65 -------------------------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDL  116 (216)
Q Consensus        65 -------------------------y~aPE~~~---~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~  116 (216)
                                               |++||++.   +..++.|+|||++||+||.|+....||+...             
T Consensus       196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg-------------  262 (738)
T KOG1989|consen  196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG-------------  262 (738)
T ss_pred             ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc-------------
Confidence                                     99999875   6689999999999999999999999986321             


Q ss_pred             hccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          117 WKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                           ...+++....-...+. ++..+.+||..||+.+|++||++-||++.+.++....+
T Consensus       263 -----~laIlng~Y~~P~~p~-ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~  316 (738)
T KOG1989|consen  263 -----KLAILNGNYSFPPFPN-YSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC  316 (738)
T ss_pred             -----ceeEEeccccCCCCcc-HHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence                 2223333332223333 88899999999999999999999999999988766554

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.95  E-value=5.6e-28  Score=198.15  Aligned_cols=134  Identities=29%  Similarity=0.390  Sum_probs=105.8

Q ss_pred             CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CCCCh
Q 040682           20 RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GYMPP   68 (216)
Q Consensus        20 ~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y~aP   68 (216)
                      ..+++.++..++.|++.||+|||+++   |+||||||+|||++.                               .|+||
T Consensus       169 ~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  245 (338)
T cd05102         169 SPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP  245 (338)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCc
Confidence            35888999999999999999999998   999999999999964                               28999


Q ss_pred             hhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHH
Q 040682           69 EYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA  147 (216)
Q Consensus        69 E~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  147 (216)
                      |++.+..++.++|||||||++||+++ |..||........     ..........     ...     +...+..+.+++
T Consensus       246 E~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-----~~~~~~~~~~-----~~~-----~~~~~~~l~~li  310 (338)
T cd05102         246 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-----FCQRLKDGTR-----MRA-----PENATPEIYRIM  310 (338)
T ss_pred             HHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-----HHHHHhcCCC-----CCC-----CCCCCHHHHHHH
Confidence            99999899999999999999999997 9999865332111     0111111110     111     111456789999


Q ss_pred             HhccccCCCCCCCHHHHHHHHccc
Q 040682          148 LLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       148 ~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .+||+.+|++||++.++++.|+.+
T Consensus       311 ~~cl~~dp~~RPs~~el~~~l~~~  334 (338)
T cd05102         311 LACWQGDPKERPTFSALVEILGDL  334 (338)
T ss_pred             HHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=5.5e-28  Score=201.97  Aligned_cols=144  Identities=22%  Similarity=0.364  Sum_probs=116.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      -|||+|+    +|..++. .++.+++.+++.+++||+.||.|||+.+   |||||+|..|++++.               
T Consensus        93 VYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~l  168 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQL  168 (592)
T ss_pred             eEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeee
Confidence            4899999    6666644 6678999999999999999999999999   999999999999986               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    +|.|||++.....+..+||||+||++|-||.|++||....-.+      .+.-++..         
T Consensus       169 e~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke------ty~~Ik~~---------  233 (592)
T KOG0575|consen  169 EYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE------TYNKIKLN---------  233 (592)
T ss_pred             cCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH------HHHHHHhc---------
Confidence                          4999999999999999999999999999999999986332111      11111110         


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        ....|...+.+..+|+...|+++|.+|||+.+|+.+
T Consensus       234 --~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  234 --EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             --CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence              111222366778999999999999999999999854

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.95  E-value=5.4e-28  Score=191.92  Aligned_cols=150  Identities=25%  Similarity=0.346  Sum_probs=117.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .+|||||    +|+++.......+++.+++.++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~  157 (266)
T cd05064          81 MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQED  157 (266)
T ss_pred             cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccc
Confidence            5899999    777775555567999999999999999999999998   999999999999965               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|+|||.+.+..++.++|||||||++||+++ |..||.......  ...    .....     ..
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--~~~----~~~~~-----~~  226 (266)
T cd05064         158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--VIK----AVEDG-----FR  226 (266)
T ss_pred             cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHH----HHHCC-----CC
Confidence                           1899999999999999999999999999875 999885432211  111    11111     00


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ..     .+..++..+.+++..||+.+|++||++.+|++.|.+.
T Consensus       227 ~~-----~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         227 LP-----APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             CC-----CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            11     1112556789999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.95  E-value=5.2e-28  Score=199.74  Aligned_cols=147  Identities=24%  Similarity=0.230  Sum_probs=117.9

Q ss_pred             eeeeecc--ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK--LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey--~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      -|+|+||  ..+.+ ...+.+.|++...+.++.+|+.||+|||++|   ||||||||+|||++.+               
T Consensus       149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~  225 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILS  225 (604)
T ss_pred             eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCC
Confidence            3889999  44444 3456678999999999999999999999999   9999999999999872               


Q ss_pred             ---------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhh
Q 040682           65 ---------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW  117 (216)
Q Consensus        65 ---------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~  117 (216)
                                                 |.+||++.+...+..+|+|+|||++|.|+.|++||...++.-.  ++.+..  
T Consensus       226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli--FqkI~~--  301 (604)
T KOG0592|consen  226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI--FQKIQA--  301 (604)
T ss_pred             hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH--HHHHHH--
Confidence                                       9999999999999999999999999999999999976554321  111110  


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                                -   ...++...++.+.+|+.+.|..||.+|+++.||.++.-
T Consensus       302 ----------l---~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpF  340 (604)
T KOG0592|consen  302 ----------L---DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPF  340 (604)
T ss_pred             ----------h---cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcc
Confidence                      0   01122224567889999999999999999999987643

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.95  E-value=1.5e-27  Score=190.80  Aligned_cols=164  Identities=24%  Similarity=0.306  Sum_probs=117.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++...  ..+++.++..++.|++.||+|||+++   ++|+||||+||+++.+              
T Consensus        83 ~~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  157 (283)
T cd05080          83 LQLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAV  157 (283)
T ss_pred             EEEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeeccccccc
Confidence            5799999    55555322  35899999999999999999999998   9999999999999651              


Q ss_pred             ------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 ------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 ------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                        |++||.+.+..++.++||||||+++++|++|..|+...........................
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd05080         158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELL  237 (283)
T ss_pred             CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhh
Confidence                              78999998888999999999999999999999887543221111110000000000011111


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      +..... ..+..++.++.+++..||+.+|++||++.++++.|+++.
T Consensus       238 ~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         238 ERGMRL-PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             hcCCCC-CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            111100 111224568999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PHA02988 hypothetical protein; Provisional

Probab=99.94  E-value=1.3e-27  Score=191.75  Aligned_cols=150  Identities=17%  Similarity=0.285  Sum_probs=115.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcC-CCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQY-SRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++... .+.+++.+...++.+++.||+|||+. +   ++||||||+||+++.              
T Consensus        97 ~~lv~Ey~~~g~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~kl~dfg~~~~  172 (283)
T PHA02988         97 LSLILEYCTRGYLREVLDK-EKDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKLKIICHGLEKI  172 (283)
T ss_pred             eEEEEEeCCCCcHHHHHhh-CCCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcEEEcccchHhh
Confidence            4799999    57777433 45689999999999999999999984 6   889999999999875              


Q ss_pred             ------------CCCChhhhhc--CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 ------------GYMPPEYALR--GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 ------------~y~aPE~~~~--~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                  .|+|||.+.+  ..++.++|||||||++|||++|..||.......  .....   ....     ..+.
T Consensus       173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~--~~~~i---~~~~-----~~~~  242 (283)
T PHA02988        173 LSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE--IYDLI---INKN-----NSLK  242 (283)
T ss_pred             hccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH--HHHHH---HhcC-----CCCC
Confidence                        2899999976  679999999999999999999999986432111  11110   0000     0111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .     +..++..+.+++.+||+.+|++||++.|+++.|+..
T Consensus       243 ~-----~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        243 L-----PLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             C-----CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            1     112566799999999999999999999999999864

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.94  E-value=8.1e-28  Score=207.53  Aligned_cols=136  Identities=28%  Similarity=0.398  Sum_probs=113.3

Q ss_pred             CCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------------------------CCChh
Q 040682           21 LLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------------------------YMPPE   69 (216)
Q Consensus        21 ~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------------------------y~aPE   69 (216)
                      +|+..+.+.|+.|||.|++||.++.   .+|||+..+|+|+..+                               ||+||
T Consensus       599 ~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppE  675 (774)
T KOG1026|consen  599 PLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPE  675 (774)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHH
Confidence            3889999999999999999999987   9999999999999873                               99999


Q ss_pred             hhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHH
Q 040682           70 YALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVAL  148 (216)
Q Consensus        70 ~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  148 (216)
                      .+..++|++++|||||||++||+++ |+.|+.+....+.      .+....+++          -+.++.|+.+++++|.
T Consensus       676 sIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV------Ie~i~~g~l----------L~~Pe~CP~~vY~LM~  739 (774)
T KOG1026|consen  676 SILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV------IECIRAGQL----------LSCPENCPTEVYSLML  739 (774)
T ss_pred             HhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH------HHHHHcCCc----------ccCCCCCCHHHHHHHH
Confidence            9999999999999999999999998 8888766544332      222222222          1233337889999999


Q ss_pred             hccccCCCCCCCHHHHHHHHccccccc
Q 040682          149 LCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       149 ~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      +||+..|.+||+++||...|+++...-
T Consensus       740 ~CW~~~P~~RPsF~eI~~~L~~~~~~s  766 (774)
T KOG1026|consen  740 ECWNENPKRRPSFKEIHSRLQAWAQAS  766 (774)
T ss_pred             HHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence            999999999999999999999875443

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=6.5e-28  Score=193.55  Aligned_cols=147  Identities=22%  Similarity=0.272  Sum_probs=111.7

Q ss_pred             eeeeecc-----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK-----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey-----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .||||||     .++.+  -..+.+.+...+.+++|++.|+.|||++|   |+||||||+|||+..              
T Consensus       251 ~YmVlE~v~GGeLfd~v--v~nk~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFGl  325 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKV--VANKYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFGL  325 (475)
T ss_pred             eEEEEEEecCccHHHHH--HhccccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccch
Confidence            4999999     33333  33456888889999999999999999999   999999999999965              


Q ss_pred             -----------------CCCChhhhhcCCC---CcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 -----------------GYMPPEYALRGFF---SIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~---~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                       .|.|||++.+..+   ..++|+||+||++|-+|+|.+||........ .    .++...+...
T Consensus       326 AK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-l----~eQI~~G~y~  400 (475)
T KOG0615|consen  326 AKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-L----KEQILKGRYA  400 (475)
T ss_pred             hhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-H----HHHHhcCccc
Confidence                             2999999987743   3578999999999999999999964433221 1    1111122111


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .       ....-.+.+++..+|+.++|..||++|||+.|+++
T Consensus       401 f-------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  401 F-------GPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             c-------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            1       11222337889999999999999999999998874

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.94  E-value=1.6e-28  Score=209.91  Aligned_cols=164  Identities=27%  Similarity=0.420  Sum_probs=135.4

Q ss_pred             eeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            4 KLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      ++|.||    +||.+++.+.+.|++.|...++++|+.|+.||...+   ++|||+..+|||++.+               
T Consensus       706 MIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvle  782 (996)
T KOG0196|consen  706 MIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE  782 (996)
T ss_pred             EEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecc
Confidence            688999    999998888899999999999999999999999999   9999999999999862               


Q ss_pred             -----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 -----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 -----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       |.|||.+...+++.++||||||+++||+++ |.+|+              |+.-+.+.+..+ 
T Consensus       783 dd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY--------------WdmSNQdVIkaI-  847 (996)
T KOG0196|consen  783 DDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY--------------WDMSNQDVIKAI-  847 (996)
T ss_pred             cCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc--------------cccchHHHHHHH-
Confidence                             999999999999999999999999999987 88885              222222222222 


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccccCccccccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLKKLAFVRS  186 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~~~~~~~~~~~  186 (216)
                      +..... +.+.+|+..+..||+.||++|.++||.+.||+..|.++.+++.+.+.......
T Consensus       848 e~gyRL-PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~  906 (996)
T KOG0196|consen  848 EQGYRL-PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESP  906 (996)
T ss_pred             HhccCC-CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCC
Confidence            221211 22233899999999999999999999999999999999888877666554443

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.94  E-value=4.7e-27  Score=187.77  Aligned_cols=149  Identities=28%  Similarity=0.431  Sum_probs=115.6

Q ss_pred             eeeeecc----cccccccCC---------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDK---------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .++||||    +|.++....               ...+++.+++.++.|++.||+|||+.+   ++|+||||+||+++.
T Consensus        83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~  159 (283)
T cd05048          83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGE  159 (283)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcC
Confidence            5789999    555552211               146889999999999999999999998   999999999999865


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~  111 (216)
                                                     .|+|||.+.+..++.++|||||||++||+++ |..||.......  .  
T Consensus       160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~--~--  235 (283)
T cd05048         160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE--V--  235 (283)
T ss_pred             CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH--H--
Confidence                                           1899999988889999999999999999998 988886433211  1  


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                        ......+...          ..+..++.++.+++.+||+.+|++||++.||++.|++
T Consensus       236 --~~~i~~~~~~----------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         236 --IEMIRSRQLL----------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             --HHHHHcCCcC----------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence              1111111110          1122356789999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.94  E-value=4.2e-27  Score=196.58  Aligned_cols=151  Identities=28%  Similarity=0.426  Sum_probs=118.5

Q ss_pred             cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------------------
Q 040682           10 LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------------------   64 (216)
Q Consensus        10 ~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------------------   64 (216)
                      +|+..+...+..|...+.+.|++|+++|+.|||+++   |||||+|..||++..+                         
T Consensus       473 SLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~q  549 (678)
T KOG0193|consen  473 SLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQ  549 (678)
T ss_pred             hhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceeeeeeeccccccCC
Confidence            788876666788999999999999999999999999   9999999999999762                         


Q ss_pred             ------CCChhhhhc---CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchh
Q 040682           65 ------YMPPEYALR---GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEI  135 (216)
Q Consensus        65 ------y~aPE~~~~---~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (216)
                            |+|||++.-   .+|+..+|||||||++|||++|.-|+......+. .    |.   -+.  ..+.+.+.  ..
T Consensus       550 p~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI-i----fm---VGr--G~l~pd~s--~~  617 (678)
T KOG0193|consen  550 PHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI-I----FM---VGR--GYLMPDLS--KI  617 (678)
T ss_pred             CccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe-E----EE---ecc--cccCccch--hh
Confidence                  999999873   3799999999999999999999999873333221 1    00   000  01112111  12


Q ss_pred             hHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          136 SLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       136 ~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ...+..++.+|+..||..++++||.+.+|+..|+.+...+
T Consensus       618 ~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~  657 (678)
T KOG0193|consen  618 RSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL  657 (678)
T ss_pred             hccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence            2237789999999999999999999999999888764443

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.94  E-value=6.8e-27  Score=187.91  Aligned_cols=154  Identities=25%  Similarity=0.347  Sum_probs=118.7

Q ss_pred             ceeeeecc----cccccccC---------------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec
Q 040682            2 CKKLVYSK----LLDAANID---------------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD   62 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~---------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~   62 (216)
                      ..++||||    +|.++...               ....+++.+++.++.|++.||+|||+++   ++|+||||+||+++
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~  157 (291)
T cd05094          81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVG  157 (291)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEc
Confidence            36899999    66666322               2235899999999999999999999998   99999999999997


Q ss_pred             C-------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchh
Q 040682           63 S-------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLL  110 (216)
Q Consensus        63 ~-------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~  110 (216)
                      .                               .|++||.+.+..++.++||||||+++|||++ |..||.......    
T Consensus       158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----  233 (291)
T cd05094         158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE----  233 (291)
T ss_pred             cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----
Confidence            4                               1899999998899999999999999999998 998875433211    


Q ss_pred             hhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          111 GHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                        ............     .     +..++..+.+++.+||+.+|++||++.+|++.|+++...
T Consensus       234 --~~~~~~~~~~~~-----~-----~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         234 --VIECITQGRVLE-----R-----PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             --HHHHHhCCCCCC-----C-----CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence              111111111111     0     111445689999999999999999999999999987443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.94  E-value=5.3e-27  Score=178.98  Aligned_cols=161  Identities=20%  Similarity=0.182  Sum_probs=122.3

Q ss_pred             eeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC----------------
Q 040682            4 KLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------   64 (216)
Q Consensus         4 ~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~----------------   64 (216)
                      -||+||   +|+.+...+...++..+++.++.+++.||+|||++.   |+|||+||.|+|++.+                
T Consensus        77 ~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~  153 (318)
T KOG0659|consen   77 SLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGS  153 (318)
T ss_pred             EEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCC
Confidence            489999   899988888899999999999999999999999999   9999999999999863                


Q ss_pred             -------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhhhhhhccCcccccc---
Q 040682           65 -------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHAWDLWKDDRVHELI---  126 (216)
Q Consensus        65 -------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---  126 (216)
                                   |+|||.+.|. .|....||||.||++.||+.|.+-|.+..+-++ ...-..........+.++.   
T Consensus       154 p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lp  233 (318)
T KOG0659|consen  154 PNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLP  233 (318)
T ss_pred             CCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccc
Confidence                         9999999987 799999999999999999999988877665432 1111111111111111111   


Q ss_pred             -------ccccccc-hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          127 -------DPVITQD-EISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       127 -------~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                             -|..... -.+. +.....+++..+|..+|.+|+++.|++++=
T Consensus       234 dY~~~~~~P~~~~~~lf~a-as~d~ldLl~~m~~ynP~~Rita~qaL~~~  282 (318)
T KOG0659|consen  234 DYVKIQQFPKPPLNNLFPA-ASSDALDLLSKMLTYNPKKRITASQALKHP  282 (318)
T ss_pred             cHHHHhcCCCCcccccccc-ccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence                   1111111 1222 566779999999999999999999988653

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.94  E-value=7.1e-27  Score=187.49  Aligned_cols=159  Identities=21%  Similarity=0.256  Sum_probs=113.6

Q ss_pred             eeeeecc---cccccc-cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK---LLDAAN-IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||   +|.++. ......+++.+++.++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        84 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T cd07862          84 LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY  160 (290)
T ss_pred             EEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence            5799999   555553 233456899999999999999999999998   999999999999974               


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc---cCcc-----
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK---DDRV-----  122 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----  122 (216)
                                   .|+|||.+.+..++.++|||||||++|||++|.+||........  .........   ....     
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~  238 (290)
T cd07862         161 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ--LGKILDVIGLPGEEDWPRDVA  238 (290)
T ss_pred             cCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHH--HHHHHHHhCCCChhhchhhhc
Confidence                         29999999988999999999999999999999999875433211  111100000   0000     


Q ss_pred             --cccccccc--ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          123 --HELIDPVI--TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       123 --~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                        ...+.+..  ............+.+++.+||+.+|++||++.|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         239 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             ccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence              00000000  000111124556789999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=9.2e-27  Score=188.59  Aligned_cols=155  Identities=26%  Similarity=0.364  Sum_probs=117.2

Q ss_pred             eeeeecc----ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      -|+||-|    ++.++ .......+.+..+..|++++++||.|||.+|   .||||||+.|||++.+             
T Consensus        99 LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~  175 (516)
T KOG0582|consen   99 LWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSAS  175 (516)
T ss_pred             eEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeee
Confidence            4788888    55555 4445566999999999999999999999999   9999999999999862             


Q ss_pred             --------------------CCChhhhhcC--CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcc
Q 040682           65 --------------------YMPPEYALRG--FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV  122 (216)
Q Consensus        65 --------------------y~aPE~~~~~--~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (216)
                                          |+|||++.+.  .|+.|+||||||++..|+.+|..||.....+...+..     +++ ..
T Consensus       176 l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t-----Lqn-~p  249 (516)
T KOG0582|consen  176 LFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT-----LQN-DP  249 (516)
T ss_pred             ecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH-----hcC-CC
Confidence                                9999997654  7999999999999999999999999766554431111     111 11


Q ss_pred             ccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          123 HELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .... ...............+.+++..||++||.+|||++++++.
T Consensus       250 p~~~-t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  250 PTLL-TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             CCcc-cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            1111 1111122233356689999999999999999999999853

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.94  E-value=6e-27  Score=185.67  Aligned_cols=146  Identities=20%  Similarity=0.285  Sum_probs=110.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|+.+...+...+++.+++.++.|++.||+|||+++   ++||||||+|||++.               
T Consensus        79 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d  155 (262)
T cd05077          79 NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSD  155 (262)
T ss_pred             CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCC
Confidence            5899999    566665455567999999999999999999999998   999999999999952               


Q ss_pred             -----------------CCCChhhhh-cCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 -----------------GYMPPEYAL-RGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 -----------------~y~aPE~~~-~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                       .|+|||.+. +..++.++|||||||++||+++ |..|+........      ..... ...  
T Consensus       156 ~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~------~~~~~-~~~--  226 (262)
T cd05077         156 PGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK------ERFYE-GQC--  226 (262)
T ss_pred             CCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH------HHHHh-cCc--
Confidence                             299999886 4578899999999999999984 7776543221110      00000 000  


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                          ... .+    ....+.+++.+||+.+|++||++.+|++.|+
T Consensus       227 ----~~~-~~----~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         227 ----MLV-TP----SCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             ----cCC-CC----ChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence                000 00    2356889999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.94  E-value=5.6e-27  Score=187.40  Aligned_cols=154  Identities=27%  Similarity=0.323  Sum_probs=119.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++.....+.+++..+..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~  159 (279)
T cd05111          83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLL  159 (279)
T ss_pred             cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceec
Confidence            4688998    777775555667999999999999999999999998   999999999999975               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|++||.+.+..++.++||||||+++||+++ |..||.......      ...........  .
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~------~~~~~~~~~~~--~  231 (279)
T cd05111         160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE------VPDLLEKGERL--A  231 (279)
T ss_pred             cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHHHCCCcC--C
Confidence                            2899999988889999999999999999998 888875432211      01111111100  0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      .+.        .+...+.+++.+||..+|++||++.|+++.|..+...+
T Consensus       232 ~~~--------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~  272 (279)
T cd05111         232 QPQ--------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP  272 (279)
T ss_pred             CCC--------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence            011        13345788999999999999999999999998865544

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.94  E-value=8.9e-27  Score=184.48  Aligned_cols=150  Identities=23%  Similarity=0.292  Sum_probs=116.2

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++.. .....+++.+++.++.|+++||+|||+++   ++|+||||+||+++.              
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~  153 (263)
T cd05052          77 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL  153 (263)
T ss_pred             cEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccc
Confidence            4789999    6666632 33456899999999999999999999998   999999999999964              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|++||.+.+..++.++|||||||++|||++ |..|+.......      .+......     .
T Consensus       154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~------~~~~~~~~-----~  222 (263)
T cd05052         154 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYELLEKG-----Y  222 (263)
T ss_pred             cccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHHHCC-----C
Confidence                            2899999988899999999999999999998 888875432111      11111110     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .+..     +...+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus       223 ~~~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         223 RMER-----PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCCC-----CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            1111     111456789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.94  E-value=6e-27  Score=185.06  Aligned_cols=146  Identities=21%  Similarity=0.349  Sum_probs=110.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|..+.......+++..++.++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        74 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~  150 (258)
T cd05078          74 SIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLS  150 (258)
T ss_pred             cEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEec
Confidence            5799999    676665555557899999999999999999999998   999999999999942               


Q ss_pred             ------------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCC-CCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 ------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGK-KSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 ------------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                        .|++||++.+. .++.++||||||+++|++++|. .|+.......     . ......    
T Consensus       151 d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-----~-~~~~~~----  220 (258)
T cd05078         151 DPGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-----K-LQFYED----  220 (258)
T ss_pred             ccccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-----H-HHHHHc----
Confidence                              28999998864 5789999999999999999985 4432211100     0 000000    


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                         ...++..     ...++.+++.+||+.+|++||++.++++.|+
T Consensus       221 ---~~~~~~~-----~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         221 ---RHQLPAP-----KWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             ---cccCCCC-----CcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence               0111111     2356899999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.94  E-value=7.4e-27  Score=184.56  Aligned_cols=150  Identities=23%  Similarity=0.289  Sum_probs=117.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++.+++.++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        69 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~  145 (257)
T cd05115          69 LMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKAL  145 (257)
T ss_pred             eEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccc
Confidence            5899999    677765555667999999999999999999999998   999999999999864               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||.+.+..++.++||||||+++|++++ |..||.......      .........    
T Consensus       146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~------~~~~~~~~~----  215 (257)
T cd05115         146 GADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE------VMSFIEQGK----  215 (257)
T ss_pred             cCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH------HHHHHHCCC----
Confidence                             2899999988889999999999999999996 998875432211      011111110    


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                       .+.     .+..+..++.+++.+||+.+|++||++.+|.+.|+..
T Consensus       216 -~~~-----~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         216 -RLD-----CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             -CCC-----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence             011     1111456788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.94  E-value=8.1e-27  Score=183.45  Aligned_cols=149  Identities=23%  Similarity=0.278  Sum_probs=115.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.+++.++.|++.||+|||+++   ++|+||||.||+++.               
T Consensus        68 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  144 (252)
T cd05084          68 IYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREE  144 (252)
T ss_pred             eEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCccc
Confidence            5899999    666664444456899999999999999999999998   999999999999875               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||.+.+..++.++||||||+++|++++ |..|+.......      ........     .
T Consensus       145 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~------~~~~~~~~-----~  213 (252)
T cd05084         145 EDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ------TREAIEQG-----V  213 (252)
T ss_pred             ccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH------HHHHHHcC-----C
Confidence                            1889999988889999999999999999998 777764322110      01111000     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ..     ..+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus       214 ~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~  252 (252)
T cd05084         214 RL-----PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS  252 (252)
T ss_pred             CC-----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence            00     1111245678999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.94  E-value=2.7e-26  Score=185.54  Aligned_cols=138  Identities=24%  Similarity=0.405  Sum_probs=101.8

Q ss_pred             CCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CCCChh
Q 040682           21 LLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GYMPPE   69 (216)
Q Consensus        21 ~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y~aPE   69 (216)
                      .+++.++..++.|++.||+|||+.+   ++||||||+||+++.                               .|+|||
T Consensus       134 ~~~~~~~~~i~~~i~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE  210 (304)
T cd05096         134 AISYSSLLHVALQIASGMKYLSSLN---FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWE  210 (304)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHCC---ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHH
Confidence            4788899999999999999999998   999999999999875                               189999


Q ss_pred             hhhcCCCCcchhhhhHHHHHHHHHhC--CCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHH
Q 040682           70 YALRGFFSIKSDVFSFGVLMLEILSG--KKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA  147 (216)
Q Consensus        70 ~~~~~~~~~~~Dv~s~G~~l~ell~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  147 (216)
                      ++.+..++.++||||||+++|||+++  ..|+......  ............... ... .    . .+..++..+.+++
T Consensus       211 ~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~-~~~-~----~-~~~~~~~~~~~li  281 (304)
T cd05096         211 CILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE--QVIENAGEFFRDQGR-QVY-L----F-RPPPCPQGLYELM  281 (304)
T ss_pred             HHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH--HHHHHHHHHhhhccc-ccc-c----c-CCCCCCHHHHHHH
Confidence            99888999999999999999999874  4555433211  111111111111100 000 0    0 0111456789999


Q ss_pred             HhccccCCCCCCCHHHHHHHHcc
Q 040682          148 LLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       148 ~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      .+||+.+|.+||++.+|.+.|+.
T Consensus       282 ~~cl~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         282 LQCWSRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             HHHccCCchhCcCHHHHHHHHhC
Confidence            99999999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.94  E-value=5.5e-27  Score=190.68  Aligned_cols=153  Identities=21%  Similarity=0.290  Sum_probs=117.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++.......+++..+..++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~  159 (316)
T cd05108          83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL  159 (316)
T ss_pred             ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccc
Confidence            4678888    666665555567899999999999999999999998   999999999999965               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|++||.+.+..++.++||||||+++||+++ |..||.......      ..........    
T Consensus       160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~------~~~~~~~~~~----  229 (316)
T cd05108         160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------ISSILEKGER----  229 (316)
T ss_pred             cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHHhCCCC----
Confidence                            1899999998899999999999999999997 888875422111      0111111100    


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                       ...     +..+...+.+++.+||+.+|++||++.+++..|..+...
T Consensus       230 -~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~  271 (316)
T cd05108         230 -LPQ-----PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  271 (316)
T ss_pred             -CCC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence             000     011345688999999999999999999999998876443

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.94  E-value=5.5e-27  Score=195.01  Aligned_cols=134  Identities=28%  Similarity=0.423  Sum_probs=105.1

Q ss_pred             CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CCCCh
Q 040682           20 RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GYMPP   68 (216)
Q Consensus        20 ~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y~aP   68 (216)
                      ..+++.++..++.|++.||+|||+++   |+||||||+|||++.                               .|+||
T Consensus       207 ~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aP  283 (374)
T cd05106         207 WPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAP  283 (374)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCH
Confidence            35788999999999999999999998   999999999999864                               19999


Q ss_pred             hhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHH
Q 040682           69 EYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA  147 (216)
Q Consensus        69 E~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  147 (216)
                      |++.+..++.++|||||||++|||++ |..||........ .    .......     ..+..+     ...+.++.+++
T Consensus       284 E~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~-~----~~~~~~~-----~~~~~~-----~~~~~~l~~li  348 (374)
T cd05106         284 ESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK-F----YKMVKRG-----YQMSRP-----DFAPPEIYSIM  348 (374)
T ss_pred             HHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH-H----HHHHHcc-----cCccCC-----CCCCHHHHHHH
Confidence            99998899999999999999999997 9999864332111 0    1111110     011111     01345789999


Q ss_pred             HhccccCCCCCCCHHHHHHHHccc
Q 040682          148 LLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       148 ~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .+||+.+|.+||++.+|++.|+++
T Consensus       349 ~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         349 KMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             HHHcCCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.94  E-value=7.5e-27  Score=188.76  Aligned_cols=160  Identities=22%  Similarity=0.260  Sum_probs=111.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   ++.++.....+.++..++..++.|++.||+|||+++   |+||||||+||+++.                
T Consensus        78 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  154 (303)
T cd07869          78 LTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKS  154 (303)
T ss_pred             EEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence            5899999   555544455567899999999999999999999998   999999999999964                


Q ss_pred             -------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc---cCcccc--
Q 040682           64 -------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK---DDRVHE--  124 (216)
Q Consensus        64 -------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--  124 (216)
                                   .|+|||++.+. .++.++||||+||++|+|++|..||.......... ........   ......  
T Consensus       155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  233 (303)
T cd07869         155 VPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQL-ERIFLVLGTPNEDTWPGVH  233 (303)
T ss_pred             CCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHH-HHHHHHhCCCChhhccchh
Confidence                         19999998764 58899999999999999999999997543321111 01000000   000000  


Q ss_pred             ---ccccc----cccchh-----hHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          125 ---LIDPV----ITQDEI-----SLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       125 ---~~~~~----~~~~~~-----~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                         ...+.    ......     .......+.+++.+||+.+|++|||+.|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         234 SLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             hccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence               00000    000000     0002346789999999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.94  E-value=8.3e-27  Score=186.04  Aligned_cols=146  Identities=19%  Similarity=0.309  Sum_probs=111.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|+.+.....+.+++..+..++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        91 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~~~~~~~~kl~d  167 (274)
T cd05076          91 NIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAEGTSPFIKLSD  167 (274)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcccCccceeeecC
Confidence            6899999    677775555667899999999999999999999998   999999999999852               


Q ss_pred             -----------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHH-hCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 -----------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEIL-SGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 -----------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                       .|++||.+.+ ..++.++||||||+++||++ +|..||........   ..   .....    
T Consensus       168 ~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~---~~---~~~~~----  237 (274)
T cd05076         168 PGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK---ER---FYEKK----  237 (274)
T ss_pred             CccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH---HH---HHHhc----
Confidence                             2899998875 46899999999999999995 68888754322111   00   00000    


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                         ...+. .    ....+.+++.+||+.+|++||++.+|++.|.
T Consensus       238 ---~~~~~-~----~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         238 ---HRLPE-P----SCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             ---cCCCC-C----CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence               00111 0    2246889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.94  E-value=2.2e-27  Score=187.87  Aligned_cols=147  Identities=34%  Similarity=0.467  Sum_probs=109.0

Q ss_pred             eeeeecc----cccccccCC-CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAANIDK-KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      .++||||    +|++++... ...+++.++..|+.|++.||+|||+++   ++|++|+++||+++.+             
T Consensus        76 ~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~  152 (259)
T PF07714_consen   76 LFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRP  152 (259)
T ss_dssp             EEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence            4789999    677774444 677999999999999999999999998   9999999999999852             


Q ss_pred             ------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           65 ------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        65 ------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                        |+|||.+.+..++.++||||||+++||+++ |+.|+......  .....    ......   
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~--~~~~~----~~~~~~---  223 (259)
T PF07714_consen  153 ISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE--EIIEK----LKQGQR---  223 (259)
T ss_dssp             TTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH--HHHHH----HHTTEE---
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccc----cccccc---
Confidence                              899999999999999999999999999999 67776433111  11111    111100   


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                        .     ..+..++..+.+++..||..+|++||++.++++.|
T Consensus       224 --~-----~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  224 --L-----PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             --T-----TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             --c-----eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence              0     01111456788999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.94  E-value=1e-26  Score=185.68  Aligned_cols=154  Identities=24%  Similarity=0.287  Sum_probs=117.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++...+...+++.+++.++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~  159 (279)
T cd05109          83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (279)
T ss_pred             cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeec
Confidence            3678888    565554454567999999999999999999999998   999999999999964               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|++||...+..++.++|||||||++||+++ |..||.......  ...    ......     
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~----~~~~~~-----  228 (279)
T cd05109         160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--IPD----LLEKGE-----  228 (279)
T ss_pred             ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHH----HHHCCC-----
Confidence                            2899999988889999999999999999998 888875322111  111    111110     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      .+..     +..++..+.+++..||+.+|++||++.++++.|+.+....
T Consensus       229 ~~~~-----~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         229 RLPQ-----PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             cCCC-----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence            0000     1114557889999999999999999999999998765443

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.94  E-value=1.6e-27  Score=188.84  Aligned_cols=162  Identities=19%  Similarity=0.210  Sum_probs=119.5

Q ss_pred             eeeeecc---ccccccc---CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC------------
Q 040682            3 KKLVYSK---LLDAANI---DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~------------   64 (216)
                      -=|||||   +|..+..   ..+..++...++.++.|+..||+|||+.+   |+||||||.|+|+|..            
T Consensus        97 lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSA  173 (364)
T KOG0658|consen   97 LNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSA  173 (364)
T ss_pred             HHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcc
Confidence            3479999   7777733   23567899999999999999999999988   9999999999999873            


Q ss_pred             -----------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhhhhhhccCccc--
Q 040682           65 -----------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHAWDLWKDDRVH--  123 (216)
Q Consensus        65 -----------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--  123 (216)
                                       |+|||.+.+. .|+.+.||||.||++.||+-|++.|.+...... .....+......+++.  
T Consensus       174 K~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m  253 (364)
T KOG0658|consen  174 KVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM  253 (364)
T ss_pred             eeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence                             9999999987 799999999999999999999999988554332 1111111111111110  


Q ss_pred             -----cccccccccch----hhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          124 -----ELIDPVITQDE----ISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       124 -----~~~~~~~~~~~----~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                           +.-.+.+....    .......+.++++.++++++|.+|.++.|++.+
T Consensus       254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence                 11112222221    222356779999999999999999999988843

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.94  E-value=1.7e-26  Score=182.97  Aligned_cols=154  Identities=19%  Similarity=0.288  Sum_probs=117.5

Q ss_pred             eeeeecc----cccccc---cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAAN---IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~---~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++|+||    +|.++.   ......++..++..++.|++.||+|||+++   ++|+||||+||+++.            
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~  153 (267)
T cd08228          77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLG  153 (267)
T ss_pred             EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccc
Confidence            5789999    565552   233456899999999999999999999998   999999999999975            


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||.+.+..++.++|+||||+++|++++|..||............    .....     .
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~----~~~~~-----~  224 (267)
T cd08228         154 RFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQ----KIEQC-----D  224 (267)
T ss_pred             eeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHH----HHhcC-----C
Confidence                             289999998888999999999999999999999997533221111110    01000     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      .+..    ........+.+++.+||+.+|++||++.+|++.|+.+.
T Consensus       225 ~~~~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         225 YPPL----PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             CCCC----ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            1111    11224567899999999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=2.2e-26  Score=188.81  Aligned_cols=159  Identities=22%  Similarity=0.308  Sum_probs=120.6

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .||||||   +|..+.....-.|++.+++.++.|++.||+|||+++   |+|||||.+|||++.+               
T Consensus       193 iYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~  269 (560)
T KOG0600|consen  193 IYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYT  269 (560)
T ss_pred             EEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeecc
Confidence            5999999   777776666667999999999999999999999999   9999999999999863               


Q ss_pred             ---------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhh--------hccC
Q 040682           65 ---------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDL--------WKDD  120 (216)
Q Consensus        65 ---------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~--------~~~~  120 (216)
                                     |++||++.|. .|+.++|+||.|||+.||+.|++.+.+..+.++  ...++..        |...
T Consensus       270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQ--l~kIfklcGSP~e~~W~~~  347 (560)
T KOG0600|consen  270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQ--LHKIFKLCGSPTEDYWPVS  347 (560)
T ss_pred             CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHH--HHHHHHHhCCCChhccccc
Confidence                           9999999987 799999999999999999999999877665443  1111111        1111


Q ss_pred             ccc--cccccccccc----hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          121 RVH--ELIDPVITQD----EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       121 ~~~--~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ++.  ..+.+.....    +.-...++..++|+...|..||++|.|+.++++
T Consensus       348 kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  348 KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            111  1112211111    111124567889999999999999999998873

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.94  E-value=1.4e-26  Score=183.73  Aligned_cols=150  Identities=27%  Similarity=0.403  Sum_probs=117.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|+++...+...+++.++..++.|++.||+|||+.+   ++|+|+||+||+++.               
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  157 (268)
T cd05063          81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVL  157 (268)
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceec
Confidence            5899999    777775555567899999999999999999999998   999999999999864               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|++||.+.+..++.++||||||+++||+++ |..||.......      .........    
T Consensus       158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~------~~~~i~~~~----  227 (268)
T cd05063         158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE------VMKAINDGF----  227 (268)
T ss_pred             ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH------HHHHHhcCC----
Confidence                             1899999988889999999999999999997 999985432211      111111100    


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ..+      ...+.+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus       228 ~~~------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         228 RLP------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             CCC------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            001      1112456789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.94  E-value=8.6e-27  Score=186.63  Aligned_cols=156  Identities=22%  Similarity=0.254  Sum_probs=115.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++.++..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI  159 (284)
T ss_pred             eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCcccccc
Confidence            5899999    677765444456899999999999999999999998   999999999999864               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCc---------cchhhhhhhhh
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGS---------FNLLGHAWDLW  117 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~---------~~~~~~~~~~~  117 (216)
                                       .|+|||.+.+..++.++||||||+++|+++++..+........         ...........
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd05079         160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL  239 (284)
T ss_pred             ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH
Confidence                             1899999988889999999999999999999776542211000         00000000000


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ....     ..     +.+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus       240 ~~~~-----~~-----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         240 EEGK-----RL-----PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HcCc-----cC-----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            0000     00     00111456799999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.94  E-value=1.5e-26  Score=189.82  Aligned_cols=134  Identities=28%  Similarity=0.388  Sum_probs=106.0

Q ss_pred             CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CCCCh
Q 040682           20 RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GYMPP   68 (216)
Q Consensus        20 ~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y~aP   68 (216)
                      ..+++.++..++.|++.||+|||+++   |+||||||+|||++.                               .|+||
T Consensus       168 ~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  244 (337)
T cd05054         168 EPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  244 (337)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence            36899999999999999999999998   999999999999974                               28999


Q ss_pred             hhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHH
Q 040682           69 EYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA  147 (216)
Q Consensus        69 E~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  147 (216)
                      |++.+..++.++|||||||+++|+++ |..||........     .........     .+..     +......+.+++
T Consensus       245 E~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-----~~~~~~~~~-----~~~~-----~~~~~~~~~~l~  309 (337)
T cd05054         245 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-----FCRRLKEGT-----RMRA-----PEYATPEIYSIM  309 (337)
T ss_pred             HHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-----HHHHHhccC-----CCCC-----CccCCHHHHHHH
Confidence            99999999999999999999999998 9988854322110     011111110     0111     112456789999


Q ss_pred             HhccccCCCCCCCHHHHHHHHccc
Q 040682          148 LLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       148 ~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .+||+.+|++||++.||+++|+..
T Consensus       310 ~~cl~~~p~~RPs~~ell~~l~~~  333 (337)
T cd05054         310 LDCWHNNPEDRPTFSELVEILGDL  333 (337)
T ss_pred             HHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.94  E-value=5.1e-26  Score=178.60  Aligned_cols=162  Identities=20%  Similarity=0.191  Sum_probs=120.9

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .||||||   +|..+....++++...+++.++.|++.|++|||.+.   |+|||+|++|+|++..               
T Consensus       152 iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg  228 (419)
T KOG0663|consen  152 IYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYG  228 (419)
T ss_pred             eeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhc
Confidence            5899999   888886666688999999999999999999999999   9999999999999762               


Q ss_pred             --------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-ch--------hhhhhhhhccC
Q 040682           65 --------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NL--------LGHAWDLWKDD  120 (216)
Q Consensus        65 --------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~--------~~~~~~~~~~~  120 (216)
                                    |+|||.+.+. .|+++.|+||+|||+.|++++++.|.+..+... +.        ....|+.+..-
T Consensus       229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l  308 (419)
T KOG0663|consen  229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL  308 (419)
T ss_pred             CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence                          9999999987 699999999999999999999999987665443 10        11122222211


Q ss_pred             ccccccc-cccccch----hhH-HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          121 RVHELID-PVITQDE----ISL-SMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       121 ~~~~~~~-~~~~~~~----~~~-~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .....+. +..+.+.    ... ...+.-++++...+.+||.+|.|+.|.++.
T Consensus       309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence            1110000 0000000    000 023678899999999999999999988754

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.94  E-value=9.9e-27  Score=186.82  Aligned_cols=162  Identities=18%  Similarity=0.263  Sum_probs=113.6

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      +.++||||   +|..+.......+++.++..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        77 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~  153 (288)
T cd07871          77 CLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAK  153 (288)
T ss_pred             eEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeec
Confidence            46899999   555554444556899999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccch---------hhhhhhhhc-
Q 040682           64 --------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNL---------LGHAWDLWK-  118 (216)
Q Consensus        64 --------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~---------~~~~~~~~~-  118 (216)
                                    .|+|||.+.+ ..++.++||||+||++|+|++|+.||..........         ....|+... 
T Consensus       154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T cd07871         154 SVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITS  233 (288)
T ss_pred             cCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcccc
Confidence                          2899999876 468999999999999999999999986543221100         000011100 


Q ss_pred             cCccccccccccccc---hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          119 DDRVHELIDPVITQD---EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       119 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .........+.....   ..........++++.+|++.||.+|||+.|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         234 NEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             chhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            000111111111000   000113456889999999999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.93  E-value=3.8e-26  Score=180.98  Aligned_cols=154  Identities=20%  Similarity=0.313  Sum_probs=118.1

Q ss_pred             eeeeecc----ccccccc---CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANI---DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++||||    +|.++..   .....+++.+++.++.|++.||+|||+++   ++|+||||+||+++.            
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~  153 (267)
T cd08229          77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLG  153 (267)
T ss_pred             EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhh
Confidence            5799999    6665522   23456899999999999999999999998   999999999999974            


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||.+.+..++.++|+||||+++|++++|..||.............         +....
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~---------~~~~~  224 (267)
T cd08229         154 RFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK---------IEQCD  224 (267)
T ss_pred             hccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhh---------hhcCC
Confidence                             2889999988889999999999999999999999985432211110000         01111


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      .+...    .......+.+++.+||+.+|++||++.+|++.+++++
T Consensus       225 ~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         225 YPPLP----SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             CCCCC----cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            11111    1125667999999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.93  E-value=1.5e-26  Score=185.02  Aligned_cols=162  Identities=22%  Similarity=0.264  Sum_probs=116.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++.++..++.|++.||+|||+++   ++|+||||+||+++.+              
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~  158 (284)
T cd05081          82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVL  158 (284)
T ss_pred             eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccc
Confidence            5799999    677775444556899999999999999999999998   9999999999999751              


Q ss_pred             ------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc----Ccc
Q 040682           65 ------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD----DRV  122 (216)
Q Consensus        65 ------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~  122 (216)
                                        |++||.+.+..++.++||||||++++|+++|..++........   .........    ..+
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  235 (284)
T cd05081         159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFM---RMMGNDKQGQMIVYHL  235 (284)
T ss_pred             cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhh---hhcccccccccchHHH
Confidence                              7899999888899999999999999999998766432211100   000000000    000


Q ss_pred             ccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          123 HELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .+.+..... ...+..++..+.+++.+||+.+|++|||+.+|++.|+++
T Consensus       236 ~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         236 IELLKNNGR-LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHHhcCCc-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            000000000 011112456799999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.93  E-value=6.2e-26  Score=191.16  Aligned_cols=100  Identities=30%  Similarity=0.402  Sum_probs=90.5

Q ss_pred             eeeecc---ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            4 KLVYSK---LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         4 ~lV~Ey---~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .||+|.   +|+++ ...+-.+|+...++.++.||+.||.+||+.+   |||+|+||+|||+..                
T Consensus       264 ciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~  340 (586)
T KOG0667|consen  264 CIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCF  340 (586)
T ss_pred             eeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccc
Confidence            588998   88888 5566667999999999999999999999998   999999999999965                


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCc
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGS  106 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~  106 (216)
                                  -|+|||++.|.+|+.+.||||||||+.||++|.+.|.+.++..
T Consensus       341 ~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~D  395 (586)
T KOG0667|consen  341 ESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYD  395 (586)
T ss_pred             cCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHH
Confidence                        1999999999999999999999999999999999998877533

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.93  E-value=2.3e-26  Score=184.29  Aligned_cols=160  Identities=18%  Similarity=0.228  Sum_probs=112.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +++.+ ......+++..++.++.|++.||+|||+.+   ++||||||+||+++.               
T Consensus        75 ~~lv~e~~~~~~l~~~-~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~  150 (287)
T cd07848          75 LYLVFEYVEKNMLELL-EEMPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNL  150 (287)
T ss_pred             EEEEEecCCCCHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccc
Confidence            5899999    33333 333456899999999999999999999998   999999999999864               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccch-hhhh--------hhh-hc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNL-LGHA--------WDL-WK  118 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~-~~~~--------~~~-~~  118 (216)
                                     .|+|||++.+..++.++|||||||++|||++|+.||.......... ....        +.. ..
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (287)
T cd07848         151 SEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS  230 (287)
T ss_pred             cccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence                           2899999998889999999999999999999999987543221100 0000        000 00


Q ss_pred             cCccccccccccccc-----hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          119 DDRVHELIDPVITQD-----EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       119 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .........+.....     ......+..+.+++.+||+.+|++|||+.|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            000000000100000     001114567999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.93  E-value=2.5e-26  Score=181.12  Aligned_cols=149  Identities=22%  Similarity=0.271  Sum_probs=114.8

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++... ....+++..+..++.|++.||+|||+++   ++|+||||+||+++.              
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~  151 (256)
T cd05082          75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKE  151 (256)
T ss_pred             eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCcccee
Confidence            5899999    66666333 3335899999999999999999999998   999999999999965              


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                  .|+|||...+..++.++|||||||++|++++ |..||......  ...    ......     ..+. 
T Consensus       152 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~--~~~----~~~~~~-----~~~~-  219 (256)
T cd05082         152 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVV----PRVEKG-----YKMD-  219 (256)
T ss_pred             ccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHH----HHHhcC-----CCCC-
Confidence                        2899999988889999999999999999997 88887532111  011    101110     0011 


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                          .+..++..+.+++.+||+.+|++||++.++++.|+.
T Consensus       220 ----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         220 ----APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             ----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence                111245678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.93  E-value=1.8e-26  Score=182.19  Aligned_cols=149  Identities=27%  Similarity=0.318  Sum_probs=115.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.. ....+++..+..++.|++.||+|||+++   ++|+||||.||+++.               
T Consensus        70 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~  145 (257)
T cd05116          70 WMLVMELAELGPLNKFLQ-KNKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL  145 (257)
T ss_pred             cEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCcccccc
Confidence            4789999    5666533 3346899999999999999999999998   999999999999864               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||.+....++.++||||||+++||+++ |..||.......  ....    .....    
T Consensus       146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~----i~~~~----  215 (257)
T cd05116         146 GADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE--VTQM----IESGE----  215 (257)
T ss_pred             CCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH----HHCCC----
Confidence                             2789999888888999999999999999998 899986432211  1111    11110    


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                       .+..+     ..++..+.+++.+||+.+|++||++.+|.+.|++.
T Consensus       216 -~~~~~-----~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         216 -RMECP-----QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             -CCCCC-----CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence             01111     11456789999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.93  E-value=1.4e-26  Score=192.57  Aligned_cols=132  Identities=27%  Similarity=0.442  Sum_probs=103.4

Q ss_pred             CCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CCCChh
Q 040682           21 LLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GYMPPE   69 (216)
Q Consensus        21 ~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y~aPE   69 (216)
                      .+++..+..++.|++.||+|||+.+   ++||||||.||+++.                               .|+|||
T Consensus       210 ~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  286 (375)
T cd05104         210 ALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPE  286 (375)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChh
Confidence            5788999999999999999999998   999999999999864                               189999


Q ss_pred             hhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHH
Q 040682           70 YALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVAL  148 (216)
Q Consensus        70 ~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  148 (216)
                      .+.+..++.++|||||||++||+++ |..||....... ...    .......     .+..+ .    ..+.++.+++.
T Consensus       287 ~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~----~~~~~~~-----~~~~~-~----~~~~~l~~li~  351 (375)
T cd05104         287 SIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFY----KMIKEGY-----RMLSP-E----CAPSEMYDIMK  351 (375)
T ss_pred             HhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHH----HHHHhCc-----cCCCC-C----CCCHHHHHHHH
Confidence            9999899999999999999999998 788875432211 111    1111110     00000 0    13456899999


Q ss_pred             hccccCCCCCCCHHHHHHHHcc
Q 040682          149 LCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       149 ~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      .||+.+|++||++.||++.|++
T Consensus       352 ~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         352 SCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             HHccCChhHCcCHHHHHHHHHh
Confidence            9999999999999999999986

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.93  E-value=2.3e-26  Score=181.74  Aligned_cols=151  Identities=26%  Similarity=0.280  Sum_probs=113.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++..+..++.|++.||+|||+.+   ++||||||+||+++.               
T Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~  148 (262)
T cd05058          72 PLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDI  148 (262)
T ss_pred             cEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccc
Confidence            5789999    676665444455788888999999999999999988   999999999999874               


Q ss_pred             ------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCC-CCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 ------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK-KSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 ------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                        .|+|||.+.+..++.++||||||+++||+++|. +|+.....  ......    .....   
T Consensus       149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~~----~~~~~---  219 (262)
T cd05058         149 YDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FDITVY----LLQGR---  219 (262)
T ss_pred             cCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHH----HhcCC---
Confidence                              188999998888999999999999999999965 44432111  011111    10000   


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                        .+..     +...+..+.+++..||+.+|++||++.+|++.|++..
T Consensus       220 --~~~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         220 --RLLQ-----PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             --CCCC-----CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence              0000     1113456889999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.93  E-value=9.9e-27  Score=190.46  Aligned_cols=158  Identities=20%  Similarity=0.243  Sum_probs=111.5

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .|+||||   +|.++.. ....+++..+..++.|++.||+|||+++   |+||||||+|||++.+               
T Consensus        79 ~~lv~e~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~  154 (338)
T cd07859          79 IYVVFELMESDLHQVIK-ANDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAF  154 (338)
T ss_pred             EEEEEecCCCCHHHHHH-hcccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccccc
Confidence            5899999   5555533 3346899999999999999999999998   9999999999999751               


Q ss_pred             -----------------CCChhhhhc--CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh----------
Q 040682           65 -----------------YMPPEYALR--GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD----------  115 (216)
Q Consensus        65 -----------------y~aPE~~~~--~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~----------  115 (216)
                                       |+|||++.+  ..++.++|||||||++|+|++|+.||........  ......          
T Consensus       155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~--~~~~~~~~~~~~~~~~  232 (338)
T cd07859         155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQ--LDLITDLLGTPSPETI  232 (338)
T ss_pred             cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHH--HHHHHHHhCCCCHHHH
Confidence                             899999876  5788999999999999999999999865432111  000000          


Q ss_pred             -hhccCccccc---ccccccc---chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          116 -LWKDDRVHEL---IDPVITQ---DEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       116 -~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       ........+.   +....+.   ...+ .....+.+++.+||+.+|++||++.|++++
T Consensus       233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         233 SRVRNEKARRYLSSMRKKQPVPFSQKFP-NADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             HHhhhhhHHHHHHhhcccCCCchHHhcC-CCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence             0000000000   0000000   0001 134567899999999999999999999854

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.93  E-value=1.3e-26  Score=185.09  Aligned_cols=165  Identities=24%  Similarity=0.313  Sum_probs=118.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|+++.......+++.++..++.|++.||+|||+.+   ++|+||||+||+++.+              
T Consensus        83 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05038          83 LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVL  159 (284)
T ss_pred             eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence            5899999    677775555556999999999999999999999998   9999999999999651              


Q ss_pred             ------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 ------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 ------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                        |.+||...+..++.++||||||++++|+++|..|+......................+.+.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd05038         160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL  239 (284)
T ss_pred             ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence                              78899998888999999999999999999999887543221110000000000000000000


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ...... ..+..++.++.+++.+||+.+|++||++.||++.|+++
T Consensus       240 ~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         240 KEGERL-PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HcCCcC-CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            000000 11112456799999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.93  E-value=2.7e-26  Score=194.62  Aligned_cols=160  Identities=16%  Similarity=0.182  Sum_probs=112.2

Q ss_pred             eeeeecc---ccccc---ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK---LLDAA---NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      .++||||   ++.++   .......+++..++.++.|++.||+|||+++   |+||||||+|||++.             
T Consensus       142 l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFGla  218 (440)
T PTZ00036        142 LNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFGSA  218 (440)
T ss_pred             EEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccccc
Confidence            4689999   44443   2234567999999999999999999999998   999999999999974             


Q ss_pred             ----------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc-------
Q 040682           64 ----------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD-------  119 (216)
Q Consensus        64 ----------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~-------  119 (216)
                                      .|+|||++.+. .++.++|||||||++|||++|.+||.+......  ..........       
T Consensus       219 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~--~~~i~~~~~~p~~~~~~  296 (440)
T PTZ00036        219 KNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ--LVRIIQVLGTPTEDQLK  296 (440)
T ss_pred             hhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCCHHHHH
Confidence                            18999998765 689999999999999999999999875432211  0000000000       


Q ss_pred             ---Cccccccccccccc----hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          120 ---DRVHELIDPVITQD----EISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       120 ---~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                         .......-+.....    ..+...+.++.+|+.+||+.+|.+||++.|++++
T Consensus       297 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        297 EMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             HhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence               00000000111000    0111134578999999999999999999999843

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.93  E-value=2.8e-26  Score=181.14  Aligned_cols=148  Identities=28%  Similarity=0.379  Sum_probs=114.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.+++.++.|++.||+|||+.+   ++|+||||+||+++.               
T Consensus        74 ~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~  150 (256)
T cd05113          74 IYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYV  150 (256)
T ss_pred             cEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceec
Confidence            4899999    566664444447899999999999999999999998   999999999999974               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|++||...+..++.++||||||+++|++++ |..||.......  .    ........     .
T Consensus       151 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~----~~~~~~~~-----~  219 (256)
T cd05113         151 LDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--T----VEKVSQGL-----R  219 (256)
T ss_pred             CCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--H----HHHHhcCC-----C
Confidence                           1899999988889999999999999999998 888875333211  0    11111110     0


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      +....     .....+.+++.+||+.+|.+||++.++++.|+
T Consensus       220 ~~~~~-----~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         220 LYRPH-----LASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CCCCC-----CCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            00001     13467899999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.93  E-value=1.7e-26  Score=186.23  Aligned_cols=154  Identities=23%  Similarity=0.269  Sum_probs=116.4

Q ss_pred             eeeeecc----cccccccCC---------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDK---------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+||||    +|.++....               ...+++.++..++.|++.||+|||+.+   ++||||||+|||++.
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~  154 (297)
T cd05089          78 LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGE  154 (297)
T ss_pred             ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECC
Confidence            5899999    565553221               235889999999999999999999998   999999999999964


Q ss_pred             ----------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhh
Q 040682           64 ----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAW  114 (216)
Q Consensus        64 ----------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~  114 (216)
                                                  .|++||...+..++.++|||||||++|||++ |..||.......  .    .
T Consensus       155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~--~----~  228 (297)
T cd05089         155 NLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE--L----Y  228 (297)
T ss_pred             CCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--H----H
Confidence                                        1899999988889999999999999999997 988885332111  1    1


Q ss_pred             hhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          115 DLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ......     ..+..+     ..++..+.+++.+||+.+|.+||++.++++.|+.+....
T Consensus       229 ~~~~~~-----~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~  279 (297)
T cd05089         229 EKLPQG-----YRMEKP-----RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR  279 (297)
T ss_pred             HHHhcC-----CCCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            111000     011111     114457899999999999999999999999988764433

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.93  E-value=2.4e-26  Score=182.18  Aligned_cols=150  Identities=27%  Similarity=0.405  Sum_probs=117.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|+++.......+++.++..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        80 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~  156 (266)
T cd05033          80 VMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRL  156 (266)
T ss_pred             eEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcc
Confidence            5899999    777775555567999999999999999999999998   999999999999975               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|++||.+.+..++.++||||||+++|++++ |..||......  ..    .........    
T Consensus       157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~----~~~~~~~~~----  226 (266)
T cd05033         157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DV----IKAVEDGYR----  226 (266)
T ss_pred             cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HH----HHHHHcCCC----
Confidence                            1899999988889999999999999999998 88887432211  11    111111000    


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .+      .+..++..+.+++.+||+.+|++||++.+|++.|++.
T Consensus       227 ~~------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         227 LP------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CC------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            00      0112456789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.93  E-value=4.7e-26  Score=186.04  Aligned_cols=161  Identities=20%  Similarity=0.254  Sum_probs=111.5

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++... ....+++.+++.++.|++.||+|||+++   ++||||||+||+++.              
T Consensus        74 ~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~  150 (327)
T cd08227          74 LWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLS  150 (327)
T ss_pred             EEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhc
Confidence            5789999    66666332 3346899999999999999999999998   999999999999853              


Q ss_pred             ----------------------CCCChhhhhcC--CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhh------
Q 040682           64 ----------------------GYMPPEYALRG--FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHA------  113 (216)
Q Consensus        64 ----------------------~y~aPE~~~~~--~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~------  113 (216)
                                            .|+|||++.+.  .++.++|||||||++||+++|..||..............      
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  230 (327)
T cd08227         151 MINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL  230 (327)
T ss_pred             cccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccc
Confidence                                  18999998763  588999999999999999999999864332110000000      


Q ss_pred             -------hhhh--------ccCccccc-----ccc---ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          114 -------WDLW--------KDDRVHEL-----IDP---VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       114 -------~~~~--------~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                             ....        ......+.     ..+   ..............+.+++.+||+.||++|||+.|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         231 LDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             ccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence                   0000        00000000     000   00000111224567899999999999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.93  E-value=4.5e-26  Score=182.87  Aligned_cols=153  Identities=25%  Similarity=0.340  Sum_probs=116.8

Q ss_pred             eeeeecc----cccccccC------------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---
Q 040682            3 KKLVYSK----LLDAANID------------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---   63 (216)
                      .++||||    +|.++...            ....+++.+++.++.|++.||+|||+++   ++||||||+||+++.   
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~  158 (288)
T cd05093          82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLL  158 (288)
T ss_pred             cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence            5899999    55555221            2235899999999999999999999998   999999999999864   


Q ss_pred             ----------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhh
Q 040682           64 ----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAW  114 (216)
Q Consensus        64 ----------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~  114 (216)
                                                  .|+|||.+.+..++.++|||||||++++|++ |..||.......  .    .
T Consensus       159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~--~----~  232 (288)
T cd05093         159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--V----I  232 (288)
T ss_pred             EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--H----H
Confidence                                        2899999988889999999999999999998 888875433211  0    1


Q ss_pred             hhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          115 DLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                      .....+...     ...     ...+..+.+++.+||+.+|.+||++.++++.|+++...
T Consensus       233 ~~i~~~~~~-----~~~-----~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         233 ECITQGRVL-----QRP-----RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             HHHHcCCcC-----CCC-----CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            111111110     001     11345689999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>PTZ00284 protein kinase; Provisional

Probab=99.93  E-value=2.6e-26  Score=196.16  Aligned_cols=160  Identities=19%  Similarity=0.211  Sum_probs=110.6

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|||+   +|.++.. ..+.+++.++..++.|++.||+|||+ .+   ||||||||+|||++.               
T Consensus       207 ~~iv~~~~g~~l~~~l~-~~~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~~~~~~~~  282 (467)
T PTZ00284        207 MCIVMPKYGPCLLDWIM-KHGPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPVTNRALPP  282 (467)
T ss_pred             EEEEEeccCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccccccccccCC
Confidence            4678887   4444422 33579999999999999999999998 47   999999999999852               


Q ss_pred             ---------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhh----
Q 040682           64 ---------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLG----  111 (216)
Q Consensus        64 ---------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~----  111 (216)
                                                 .|+|||++.+..++.++|||||||++|||++|+.||........ ....    
T Consensus       283 ~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g  362 (467)
T PTZ00284        283 DPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLG  362 (467)
T ss_pred             CCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC
Confidence                                       39999999999999999999999999999999999976543211 0000    


Q ss_pred             ----hhhhhhccCcccccc------ccccccc----------hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          112 ----HAWDLWKDDRVHELI------DPVITQD----------EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       112 ----~~~~~~~~~~~~~~~------~~~~~~~----------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                          ..............+      .+.....          .........+.+|+.+||+.||.+|||+.|+++
T Consensus       363 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        363 RLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             CCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence                000000000000000      0000000          000002346789999999999999999999986

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=2.7e-26  Score=176.56  Aligned_cols=151  Identities=23%  Similarity=0.284  Sum_probs=116.5

Q ss_pred             eeeecc----ccccc---ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCC--eecCCCCCCceeecCC----------
Q 040682            4 KLVYSK----LLDAA---NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLR--IIHRDLKASNILLDSG----------   64 (216)
Q Consensus         4 ~lV~Ey----~l~~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~dik~~nil~~~~----------   64 (216)
                      ++||||    +|...   ....++.+++.++++++.|++.||..+|++ +++  |+||||||.||.++.+          
T Consensus        96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL  174 (375)
T KOG0591|consen   96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFGL  174 (375)
T ss_pred             HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccchh
Confidence            689999    55554   345566799999999999999999999994 234  9999999999999862          


Q ss_pred             -------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           65 -------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        65 -------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                         ||+||.+.+.+|+.++||||+||++|||+.=++||.+.     ++...... +..+     
T Consensus       175 ~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~K-I~qg-----  243 (375)
T KOG0591|consen  175 GRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKK-IEQG-----  243 (375)
T ss_pred             HhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHH-HHcC-----
Confidence                               99999999999999999999999999999999999765     22211111 1111     


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                         ..++. +....+.++..++..|+..||+.||+...++..++.
T Consensus       244 ---d~~~~-p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  244 ---DYPPL-PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             ---CCCCC-cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence               11111 223378889999999999999999996555555554

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=3.1e-26  Score=180.70  Aligned_cols=149  Identities=27%  Similarity=0.345  Sum_probs=116.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.... ..+++..+..++.|++.||+|||..+   ++|+||||+||+++.               
T Consensus        70 ~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~  145 (257)
T cd05060          70 LMLVMELAPLGPLLKYLKKR-REIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRAL  145 (257)
T ss_pred             eEEEEEeCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEecccccccee
Confidence            5789999    566663333 36899999999999999999999998   999999999999864               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|++||.+.+..++.++||||||+++|++++ |..||......  .....    .....    
T Consensus       146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--~~~~~----~~~~~----  215 (257)
T cd05060         146 GAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--EVIAM----LESGE----  215 (257)
T ss_pred             ecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH--HHHHH----HHcCC----
Confidence                             1899999988889999999999999999998 89987543221  11111    11110    


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                        +    ...+..++..+.+++.+||..+|++||++.++++.|++.
T Consensus       216 --~----~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         216 --R----LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             --c----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence              0    011112456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.93  E-value=7.6e-26  Score=179.05  Aligned_cols=154  Identities=21%  Similarity=0.301  Sum_probs=117.7

Q ss_pred             eeeeecc----cccccc---cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAAN---IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~---~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++||||    +|..+.   ......+++.+++.++.+++.||+|||+.+   ++|+||+|+||+++.            
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~  153 (267)
T cd08224          77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLG  153 (267)
T ss_pred             EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEecccee
Confidence            5789999    555552   233456899999999999999999999998   999999999999975            


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|.+||.+.+..++.++||||||+++|++++|..||.............    .....     
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~~~-----  224 (267)
T cd08224         154 RFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK----IEKCD-----  224 (267)
T ss_pred             eeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhh----hhcCC-----
Confidence                             1899999988889999999999999999999999975332111111000    00000     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      .+..+    .......+.+++.+||..+|++||++.+|++.|+.++
T Consensus       225 ~~~~~----~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         225 YPPLP----ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             CCCCC----hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            01111    1124567889999999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.93  E-value=6e-26  Score=185.83  Aligned_cols=160  Identities=20%  Similarity=0.339  Sum_probs=113.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.. ....+++..+..++.|++.||.|||+++  .++|+||||+||+++.               
T Consensus        78 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  154 (331)
T cd06649          78 ISICMEHMDGGSLDQVLK-EAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  154 (331)
T ss_pred             EEEEeecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccc
Confidence            5899999    6766633 3346899999999999999999999853  3999999999999975               


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh-hhc--cCccc-----
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD-LWK--DDRVH-----  123 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~-----  123 (216)
                                  .|+|||.+.+..++.++|||||||++||+++|+.||........  ...... ...  .....     
T Consensus       155 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  232 (331)
T cd06649         155 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL--EAIFGRPVVDGEEGEPHSISPR  232 (331)
T ss_pred             cccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHhcccccccccCCccccCcc
Confidence                        29999999988999999999999999999999999864332111  000000 000  00000     


Q ss_pred             ----------------------c----ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          124 ----------------------E----LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       124 ----------------------~----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                                            .    +..... ..........++.+++.+||+.+|++||++.+++++-
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~  302 (331)
T cd06649         233 PRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPP-PKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT  302 (331)
T ss_pred             cccccccccccccccccchhHHHHHHHHHhCCC-cCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence                                  0    000000 0000111456789999999999999999999998653

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.93  E-value=3.6e-26  Score=180.27  Aligned_cols=148  Identities=29%  Similarity=0.377  Sum_probs=114.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++..+..++.|++.||+|||+++   ++|+|+||+||+++.               
T Consensus        74 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~  150 (256)
T cd05114          74 LYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYV  150 (256)
T ss_pred             EEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCcccc
Confidence            5799999    566664444456899999999999999999999998   999999999999974               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|+|||.+.+..++.++||||||+++|++++ |+.||.......  ......    ...  ....
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~--~~~~i~----~~~--~~~~  222 (256)
T cd05114         151 LDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE--VVEMIS----RGF--RLYR  222 (256)
T ss_pred             CCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHH----CCC--CCCC
Confidence                           1899999988889999999999999999999 888875432211  111111    110  0001


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      +.        .....+.+++.+||+.+|++||++.++++.|.
T Consensus       223 ~~--------~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         223 PK--------LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             CC--------CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            11        13456899999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.93  E-value=6.5e-26  Score=181.90  Aligned_cols=96  Identities=32%  Similarity=0.513  Sum_probs=86.3

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      +-||||||    +|.++ ...++.+++.+++.++.|++.||++||+++   ||||||||.|||++.+             
T Consensus        83 ~i~lVMEyC~gGDLs~y-i~~~~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIAD  158 (429)
T KOG0595|consen   83 FIYLVMEYCNGGDLSDY-IRRRGRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIAD  158 (429)
T ss_pred             eEEEEEEeCCCCCHHHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecc
Confidence            35899999    45555 444557999999999999999999999999   9999999999999751             


Q ss_pred             ---------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCc
Q 040682           65 ---------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAV  101 (216)
Q Consensus        65 ---------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~  101 (216)
                                           |||||++....|+.|+|+||+|+++|++++|+.||..
T Consensus       159 FGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a  216 (429)
T KOG0595|consen  159 FGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA  216 (429)
T ss_pred             cchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence                                 9999999999999999999999999999999999864

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.93  E-value=3.3e-26  Score=180.89  Aligned_cols=149  Identities=25%  Similarity=0.352  Sum_probs=115.1

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++.. .....+++.++..++.|++.||+|||+.+   ++|+||||+||+++.              
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~  152 (261)
T cd05072          76 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARV  152 (261)
T ss_pred             cEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCcccee
Confidence            5899999    6666532 33456899999999999999999999988   999999999999975              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||.+.+..++.++||||||+++|++++ |..||.......  ....    ....     .
T Consensus       153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~----~~~~-----~  221 (261)
T cd05072         153 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSA----LQRG-----Y  221 (261)
T ss_pred             cCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHH----HHcC-----C
Confidence                            1899999988889999999999999999998 888875432211  1111    1111     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ...     .....+.++.+++.+||+.+|++||++.++++.|++
T Consensus       222 ~~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         222 RMP-----RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CCC-----CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            000     001144578999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.93  E-value=3.1e-26  Score=180.73  Aligned_cols=148  Identities=26%  Similarity=0.322  Sum_probs=115.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++..+..++.|++.||+|||+.+   ++|+|+||+||+++.               
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~  150 (256)
T cd05059          74 IFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYV  150 (256)
T ss_pred             eEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceec
Confidence            5899999    666665444557899999999999999999999998   999999999999864               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|++||.+.+..++.++||||||+++|++++ |..||........      ......     ...
T Consensus       151 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~------~~~~~~-----~~~  219 (256)
T cd05059         151 LDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV------VESVSA-----GYR  219 (256)
T ss_pred             ccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH------HHHHHc-----CCc
Confidence                           2899999998889999999999999999998 7888754322110      111111     011


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      ...+     ..++.++.+++.+||+.+|++||++.++++.|.
T Consensus       220 ~~~~-----~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~  256 (256)
T cd05059         220 LYRP-----KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT  256 (256)
T ss_pred             CCCC-----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence            1111     114567999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.93  E-value=3.8e-26  Score=182.75  Aligned_cols=150  Identities=29%  Similarity=0.412  Sum_probs=114.3

Q ss_pred             eeeeecc----cccccccC----------------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec
Q 040682            3 KKLVYSK----LLDAANID----------------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD   62 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~----------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~   62 (216)
                      .|+||||    +|.++...                ....+++.++..++.|++.||+|||+++   ++|+||||+||+++
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~  158 (283)
T cd05090          82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIG  158 (283)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEc
Confidence            5899999    66655321                1235789999999999999999999998   99999999999997


Q ss_pred             C-------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchh
Q 040682           63 S-------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLL  110 (216)
Q Consensus        63 ~-------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~  110 (216)
                      .                               .|++||.+.+..++.++||||||+++|||++ |..||.......  . 
T Consensus       159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~--~-  235 (283)
T cd05090         159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE--V-  235 (283)
T ss_pred             CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH--H-
Confidence            5                               1899999988889999999999999999998 888875432111  1 


Q ss_pred             hhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          111 GHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                         ..........    +      .+..+..++.+++.+||+.+|++||++.+|++.|+++
T Consensus       236 ---~~~~~~~~~~----~------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05090         236 ---IEMVRKRQLL----P------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRSW  283 (283)
T ss_pred             ---HHHHHcCCcC----C------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhcC
Confidence               1111111000    0      1111456789999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=2.2e-26  Score=182.08  Aligned_cols=167  Identities=23%  Similarity=0.306  Sum_probs=120.0

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      -|+|+|+   +|... ...+..|+...+..+++|++.||.|+|+.+   |+|||+||+|++++.+               
T Consensus       101 vYiV~elMetDL~~i-ik~~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~  176 (359)
T KOG0660|consen  101 VYLVFELMETDLHQI-IKSQQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLARYLD  176 (359)
T ss_pred             eEEehhHHhhHHHHH-HHcCccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccceeecc
Confidence            4889999   66666 444445999999999999999999999999   9999999999999762               


Q ss_pred             ----------------CCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhh--------hhhhc
Q 040682           65 ----------------YMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHA--------WDLWK  118 (216)
Q Consensus        65 ----------------y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~--------~~~~~  118 (216)
                                      |+|||++.. ..|+.+.||||.||++.||++|++.|.+.+.-.. ......        ...+.
T Consensus       177 ~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~  256 (359)
T KOG0660|consen  177 KFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIR  256 (359)
T ss_pred             ccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhc
Confidence                            999998865 4899999999999999999999999987764332 111111        11111


Q ss_pred             cCccccccc--cccccchhh---HHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hccccc
Q 040682          119 DDRVHELID--PVITQDEIS---LSMLMRYVKVALLCVQETVADRPTMSDVVSM--ISNEHL  173 (216)
Q Consensus       119 ~~~~~~~~~--~~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--L~~~~~  173 (216)
                      .......+.  |..++.+..   .......++++.++|..||.+|+|++|++++  |...+.
T Consensus       257 s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hd  318 (359)
T KOG0660|consen  257 SEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHD  318 (359)
T ss_pred             cHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcC
Confidence            111111111  111111111   1245678999999999999999999999854  444433

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.93  E-value=8.3e-27  Score=190.28  Aligned_cols=143  Identities=19%  Similarity=0.244  Sum_probs=110.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. ...+.+++.++..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        70 ~~lv~e~~~~~~L~~~l-~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~  145 (323)
T cd05571          70 LCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             EEEEEeCCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence            5899999    554443 33457899999999999999999999998   999999999999965               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|||++|..||.......  .    .......      +..
T Consensus       146 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--~----~~~~~~~------~~~  213 (323)
T cd05571         146 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--L----FELILME------EIR  213 (323)
T ss_pred             ccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH--H----HHHHHcC------CCC
Confidence                          2999999999999999999999999999999999985432111  0    0000000      011


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~  166 (216)
                      .     +......+.+++.+||+.||++||     ++.++++
T Consensus       214 ~-----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         214 F-----PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             C-----CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            1     112456788999999999999999     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.93  E-value=3.7e-26  Score=182.31  Aligned_cols=148  Identities=27%  Similarity=0.365  Sum_probs=113.4

Q ss_pred             eeeeecc----cccccccCC------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------
Q 040682            3 KKLVYSK----LLDAANIDK------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------   63 (216)
                      .++||||    +|.++....      ...+++.++..++.|++.||+|||+++   ++|+||||+||+++.         
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence            5799999    666652221      235899999999999999999999998   999999999999952         


Q ss_pred             -------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhh
Q 040682           64 -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLW  117 (216)
Q Consensus        64 -------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~  117 (216)
                                               .|++||.+.+..++.++|||||||++||+++ |..||.......  .    ....
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~----~~~~  234 (277)
T cd05036         161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--V----MEFV  234 (277)
T ss_pred             ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--H----HHHH
Confidence                                     1899999998899999999999999999997 888875432211  1    1111


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      ....     ...     .+...+..+.+++.+||+.+|++||++.+|++.|+
T Consensus       235 ~~~~-----~~~-----~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         235 TGGG-----RLD-----PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HcCC-----cCC-----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            0000     000     11124567899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.93  E-value=4.4e-26  Score=184.32  Aligned_cols=151  Identities=23%  Similarity=0.336  Sum_probs=115.2

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++... ....+++.++..++.|++.||+|||+++   ++|+||||+||+++.              
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~~  190 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLARD  190 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCccccc
Confidence            5899999    56666333 2334899999999999999999999998   999999999999865              


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||.+.+..++.++|||||||++|++++ |..||........ ....    ....     
T Consensus       191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~-~~~~----~~~~-----  260 (302)
T cd05055         191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK-FYKL----IKEG-----  260 (302)
T ss_pred             ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH-HHHH----HHcC-----
Confidence                             1899999988889999999999999999998 8888754322110 0000    1000     


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ..+..     +...+.++.+++.+||+.+|++||++.|+++.|++.
T Consensus       261 ~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         261 YRMAQ-----PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             CcCCC-----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            00000     011345789999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.93  E-value=5.3e-26  Score=182.33  Aligned_cols=148  Identities=22%  Similarity=0.212  Sum_probs=111.7

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|..... .....+++.++..++.|++.||+|||+.+   ++||||||+|||++.              
T Consensus        75 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~  151 (285)
T cd05631          75 LCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQ  151 (285)
T ss_pred             EEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEE
Confidence            5789999    5554432 23346899999999999999999999998   999999999999964              


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|+|++|+.||........  .........        ...
T Consensus       152 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~--~~~~~~~~~--------~~~  221 (285)
T cd05631         152 IPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK--REEVDRRVK--------EDQ  221 (285)
T ss_pred             cCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh--HHHHHHHhh--------ccc
Confidence                          29999999999999999999999999999999999875433211  000000000        000


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPT-----MSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~  166 (216)
                         ...+...+..+.+++.+||+.+|.+||+     +.++++
T Consensus       222 ---~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         222 ---EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             ---ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence               0111124567889999999999999997     677775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.93  E-value=6e-26  Score=179.26  Aligned_cols=149  Identities=27%  Similarity=0.369  Sum_probs=116.0

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++... ....+++.++..++.|++.||+|||+++   ++|+||||+||+++.              
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~  153 (261)
T cd05148          77 VYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARL  153 (261)
T ss_pred             eEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhh
Confidence            5899999    66666333 3456899999999999999999999998   999999999999965              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|++||.+.+..++.++||||||++++++++ |..||.......  ....    ....     ..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~--~~~~----~~~~-----~~  222 (261)
T cd05148         154 IKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE--VYDQ----ITAG-----YR  222 (261)
T ss_pred             cCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH--HHHH----HHhC-----Cc
Confidence                           2889999988889999999999999999998 788885433111  1111    1000     00


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ..     .+...+..+.+++.+||+.+|.+||++.++++.|+.
T Consensus       223 ~~-----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         223 MP-----CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             CC-----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            00     111245678999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=5.9e-26  Score=187.39  Aligned_cols=142  Identities=23%  Similarity=0.254  Sum_probs=112.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .|+||||    .|.++... ++.+.+..+..+++|++.|++|||+++   |+||||||+|+|++..              
T Consensus        95 ~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s~~  170 (370)
T KOG0583|consen   95 IYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLSAI  170 (370)
T ss_pred             EEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence            5899999    34444344 778999999999999999999999999   9999999999999761              


Q ss_pred             ----------------CCChhhhhcCC-CC-cchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 ----------------YMPPEYALRGF-FS-IKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 ----------------y~aPE~~~~~~-~~-~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      |+|||++.+.. |+ .++||||+|+++|.|++|..||.......     .... +..+      
T Consensus       171 ~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~-----l~~k-i~~~------  238 (370)
T KOG0583|consen  171 SPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN-----LYRK-IRKG------  238 (370)
T ss_pred             cCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH-----HHHH-HhcC------
Confidence                            99999999987 86 88999999999999999999997522111     1111 1011      


Q ss_pred             ccccccchhhHHH-HHHHHHHHHhccccCCCCCCCHHHHH
Q 040682          127 DPVITQDEISLSM-LMRYVKVALLCVQETVADRPTMSDVV  165 (216)
Q Consensus       127 ~~~~~~~~~~~~~-~~~~~~l~~~cl~~~p~~Rps~~evl  165 (216)
                        .   ...+... +.++..++.+|++.+|.+|+++.+++
T Consensus       239 --~---~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  239 --E---FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             --C---ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence              0   0111112 66789999999999999999999998

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.93  E-value=5.2e-26  Score=180.85  Aligned_cols=150  Identities=25%  Similarity=0.296  Sum_probs=114.4

Q ss_pred             eeeeecc----cccccccCC---------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDK---------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+||||    +|.++....               ...+++.++..++.|++.||+|||+.+   ++|+||||+||+++.
T Consensus        71 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~  147 (270)
T cd05047          71 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGE  147 (270)
T ss_pred             ceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcC
Confidence            5799999    666553221               235889999999999999999999988   999999999999964


Q ss_pred             ----------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhh
Q 040682           64 ----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAW  114 (216)
Q Consensus        64 ----------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~  114 (216)
                                                  .|+|||.+.+..++.++||||||+++|||++ |..||.......  ....  
T Consensus       148 ~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~--  223 (270)
T cd05047         148 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYEK--  223 (270)
T ss_pred             CCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH--HHHH--
Confidence                                        1899999988889999999999999999997 999885422111  1111  


Q ss_pred             hhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          115 DLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                        ....     ......     ......+.+++.+||+.+|.+||++.++++.|+.+
T Consensus       224 --~~~~-----~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         224 --LPQG-----YRLEKP-----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             --HhCC-----CCCCCC-----CcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence              1000     000011     11345688999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.93  E-value=4.8e-26  Score=180.89  Aligned_cols=150  Identities=25%  Similarity=0.333  Sum_probs=114.1

Q ss_pred             eeeeecc----cccccc-----cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------
Q 040682            3 KKLVYSK----LLDAAN-----IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~-----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------   63 (216)
                      .++||||    +|..+.     ......+++.++..++.|++.||+|||+++   |+||||||+||+++.          
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg  157 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG  157 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence            5789999    555442     123345899999999999999999999988   999999999999975          


Q ss_pred             ---------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           64 ---------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        64 ---------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                           .|++||...+..++.++||||||+++||+++ |..||......      ..+.......
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~~~~~~~~  231 (272)
T cd05075         158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS------EIYDYLRQGN  231 (272)
T ss_pred             cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHHcCC
Confidence                                 1788999888889999999999999999999 78887542211      1111111111


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ...     .     +......+.+++.+||+.+|++||++.++++.|+..
T Consensus       232 ~~~-----~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         232 RLK-----Q-----PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCC-----C-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            100     0     011445689999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.93  E-value=7.2e-26  Score=178.92  Aligned_cols=149  Identities=28%  Similarity=0.427  Sum_probs=115.0

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++... ....+++.++..++.+++.||+|||+.+   ++|+||||+||+++.              
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~  151 (260)
T cd05070          75 IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARL  151 (260)
T ss_pred             cEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeee
Confidence            5899999    66665332 3345899999999999999999999998   999999999999865              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||...+..++.++||||||+++|++++ |..||......  .....    ....     .
T Consensus       152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~----~~~~-----~  220 (260)
T cd05070         152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQ----VERG-----Y  220 (260)
T ss_pred             ccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHH----HHcC-----C
Confidence                            1899999988889999999999999999999 78887532211  11111    1100     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ...     .+...+..+.+++.+||+.+|++|||+.++.+.|++
T Consensus       221 ~~~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         221 RMP-----CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCC-----CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            010     111245679999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.93  E-value=6.3e-26  Score=180.93  Aligned_cols=149  Identities=24%  Similarity=0.363  Sum_probs=114.9

Q ss_pred             eeeeecc----ccccccc-------------CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--
Q 040682            3 KKLVYSK----LLDAANI-------------DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--   63 (216)
                      .++||||    +|.++..             .....+++.++..++.|++.||+|||+++   ++|+||||+||+++.  
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~  159 (280)
T cd05049          83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDL  159 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCC
Confidence            5899999    5665522             12345889999999999999999999998   999999999999864  


Q ss_pred             -----------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhh
Q 040682           64 -----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHA  113 (216)
Q Consensus        64 -----------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~  113 (216)
                                                   .|+|||++.+..++.++||||||+++||+++ |..||.......  ..   
T Consensus       160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~--~~---  234 (280)
T cd05049         160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE--VI---  234 (280)
T ss_pred             eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HH---
Confidence                                         2899999999999999999999999999998 999875433221  11   


Q ss_pred             hhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          114 WDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                       .........          ..+...+..+.+++.+||+.+|++||++.||++.|++
T Consensus       235 -~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         235 -ECITQGRLL----------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             -HHHHcCCcC----------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence             111111110          0011245678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.3e-26  Score=187.34  Aligned_cols=144  Identities=23%  Similarity=0.373  Sum_probs=113.1

Q ss_pred             eeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            4 KLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      |++|||    ++.+++ .....+.+.++.-++++++.||.|||+++   .+|||||+.|||+...               
T Consensus        87 wiiMey~~gGsv~~lL-~~~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~  162 (467)
T KOG0201|consen   87 WIIMEYCGGGSVLDLL-KSGNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLT  162 (467)
T ss_pred             HHHHHHhcCcchhhhh-ccCCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeee
Confidence            788999    444442 22334588888899999999999999998   9999999999998652               


Q ss_pred             --------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           65 --------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        65 --------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                    |||||++.+..|+.++||||+|++.+||.+|.+|+.....+..-+.           +.+..-|.+
T Consensus       163 ~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl-----------Ipk~~PP~L  231 (467)
T KOG0201|consen  163 NTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL-----------IPKSAPPRL  231 (467)
T ss_pred             chhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe-----------ccCCCCCcc
Confidence                          9999999988999999999999999999999999865554332100           011111222


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..     ++++.+.+|+..||+++|+.||++++++++
T Consensus       232 ~~-----~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  232 DG-----DFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             cc-----ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            11     377889999999999999999999999853

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.93  E-value=3.2e-26  Score=203.76  Aligned_cols=154  Identities=27%  Similarity=0.335  Sum_probs=123.5

Q ss_pred             eeeeecc----cccccccCC------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------
Q 040682            3 KKLVYSK----LLDAANIDK------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------   64 (216)
                      +++|+||    +|..+++..      ...++....+.++.|||+|+.||++++   .|||||..+|+|++..        
T Consensus       770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDF  846 (1025)
T KOG1095|consen  770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADF  846 (1025)
T ss_pred             cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEccc
Confidence            6899999    666664544      667999999999999999999999998   9999999999999862        


Q ss_pred             -----------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccC
Q 040682           65 -----------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDD  120 (216)
Q Consensus        65 -----------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~  120 (216)
                                             |||||.+....|+.++|||||||++||+++ |..|+...+..+.  ...   ..+.+
T Consensus       847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v--~~~---~~~gg  921 (1025)
T KOG1095|consen  847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV--LLD---VLEGG  921 (1025)
T ss_pred             chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH--HHH---HHhCC
Confidence                                   999999999999999999999999999998 7778754333221  110   11111


Q ss_pred             ccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          121 RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                              +   .+.+..|+..++++|..||+.+|++||++..|++++..+...+
T Consensus       922 --------R---L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~  965 (1025)
T KOG1095|consen  922 --------R---LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA  965 (1025)
T ss_pred             --------c---cCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence                    1   1122237788999999999999999999999999988765543

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3.4e-26  Score=185.80  Aligned_cols=146  Identities=21%  Similarity=0.243  Sum_probs=110.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++..+..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        68 ~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~  143 (312)
T cd05585          68 LYLVLAFINGGELFHHLQ-REGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLN  143 (312)
T ss_pred             EEEEEcCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccC
Confidence            5899999    5555432 3456899999999999999999999998   999999999999964               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|+|++|..||.......     ...... ..       + 
T Consensus       144 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~-----~~~~~~-~~-------~-  209 (312)
T cd05585         144 MKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE-----MYRKIL-QE-------P-  209 (312)
T ss_pred             ccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH-----HHHHHH-cC-------C-
Confidence                          2999999999999999999999999999999999986432111     101000 00       0 


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      .   ..+......+.+++.+||+.+|.+||++..+.+.|+
T Consensus       210 ~---~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         210 L---RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             C---CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence            0   111124567889999999999999987544444444

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.93  E-value=8.4e-26  Score=178.75  Aligned_cols=164  Identities=21%  Similarity=0.258  Sum_probs=118.6

Q ss_pred             eeeeecc---cccccccCCC---CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC------------
Q 040682            3 KKLVYSK---LLDAANIDKK---RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~------------   64 (216)
                      -+|||||   .|..+.....   +.++...++.+++|++.||+|||+++   |+|||+||.|||++..            
T Consensus        92 l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlAr  168 (323)
T KOG0594|consen   92 LYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLAR  168 (323)
T ss_pred             EEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchHH
Confidence            3689999   6666633322   56888999999999999999999999   9999999999999873            


Q ss_pred             -----------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhh---ccCccc
Q 040682           65 -----------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW---KDDRVH  123 (216)
Q Consensus        65 -----------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  123 (216)
                                       |+|||++.+. .|+...||||+||++.||+++++.|.+..+...  ...+....   ..+.+.
T Consensus       169 a~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~q--l~~If~~lGtP~e~~Wp  246 (323)
T KOG0594|consen  169 AFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQ--LFRIFRLLGTPNEKDWP  246 (323)
T ss_pred             HhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHH--HHHHHHHcCCCCccCCC
Confidence                             9999999988 799999999999999999999999887665332  11111111   111111


Q ss_pred             ccc---c-----cccc-cchhhHH---HHHHHHHHHHhccccCCCCCCCHHHHHHH--Hccc
Q 040682          124 ELI---D-----PVIT-QDEISLS---MLMRYVKVALLCVQETVADRPTMSDVVSM--ISNE  171 (216)
Q Consensus       124 ~~~---~-----~~~~-~~~~~~~---~~~~~~~l~~~cl~~~p~~Rps~~evl~~--L~~~  171 (216)
                      ...   +     +... .......   ......+++..|++.+|.+|.|++.++++  +...
T Consensus       247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence            111   0     0000 0011110   12468999999999999999999999876  5543

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.93  E-value=1.2e-25  Score=180.19  Aligned_cols=159  Identities=22%  Similarity=0.266  Sum_probs=112.6

Q ss_pred             eeeeecc---ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK---LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||   +|..+.. .....+++.++..++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        82 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~~~  158 (288)
T cd07863          82 VTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLARIY  158 (288)
T ss_pred             EEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCccccc
Confidence            4799999   4555522 23345899999999999999999999998   999999999999964               


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc---cCccc----
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK---DDRVH----  123 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----  123 (216)
                                   .|+|||++.+..++.++||||+||++|+|++|.++|........  .........   .....    
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07863         159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ--LGKIFDLIGLPPEDDWPRDVT  236 (288)
T ss_pred             cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH--HHHHHHHhCCCChhhCccccc
Confidence                         29999999988999999999999999999999999854332111  111110000   00000    


Q ss_pred             ---ccccccccc--chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          124 ---ELIDPVITQ--DEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       124 ---~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                         ..+.+....  .....+....+.+++.+|++.||++||++.|++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         237 LPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             ccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence               000010000  0111124567889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.93  E-value=3.6e-26  Score=183.64  Aligned_cols=150  Identities=24%  Similarity=0.318  Sum_probs=115.2

Q ss_pred             eeeeecc----ccccccc---------------CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANI---------------DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .++||||    +|..+..               ...+.+++..++.++.|++.||+|||+.+   ++|+||||+||+++.
T Consensus        91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~~  167 (293)
T cd05053          91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLVTE  167 (293)
T ss_pred             eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEEcC
Confidence            5789999    5555522               23456899999999999999999999988   999999999999874


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~  111 (216)
                                                     .|++||.+.+..++.++|||||||++||+++ |..||.......     
T Consensus       168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----  242 (293)
T cd05053         168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-----  242 (293)
T ss_pred             CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH-----
Confidence                                           2899999988889999999999999999997 888875332111     


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                       .........     .+.     .+..+...+.+++.+||+.+|++|||+.++++.|+++
T Consensus       243 -~~~~~~~~~-----~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         243 -LFKLLKEGY-----RME-----KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             -HHHHHHcCC-----cCC-----CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence             011111110     000     1111456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.93  E-value=1.9e-25  Score=179.65  Aligned_cols=156  Identities=24%  Similarity=0.387  Sum_probs=113.3

Q ss_pred             eeeeecc----cccccccCC----------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----
Q 040682            3 KKLVYSK----LLDAANIDK----------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----   63 (216)
                      .++||||    +|..+....          ...+++.+++.++.|++.||+|||+.+   ++|+||||+||+++.     
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~Nili~~~~~~~  170 (296)
T cd05051          94 LCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRNCLVGKNYTIK  170 (296)
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhceeecCCCceE
Confidence            5789998    555553222          236899999999999999999999998   999999999999864     


Q ss_pred             --------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh--CCCCCCcCCCCccchhhhhhh
Q 040682           64 --------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS--GKKSTAVYNTGSFNLLGHAWD  115 (216)
Q Consensus        64 --------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~--g~~~~~~~~~~~~~~~~~~~~  115 (216)
                                                .|++||.+.+..++.++|||||||++||+++  +..|+......  ........
T Consensus       171 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~--~~~~~~~~  248 (296)
T cd05051         171 IADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ--QVIENAGH  248 (296)
T ss_pred             EccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH--HHHHHHHh
Confidence                                      2899999988889999999999999999998  55665432211  11111111


Q ss_pred             hhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          116 LWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      .+......... +      .+...+.++.+++.+||+.+|++||++.||++.|+.
T Consensus       249 ~~~~~~~~~~~-~------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         249 FFRDDGRQIYL-P------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             ccccccccccC-C------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence            11111100000 0      111144679999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.93  E-value=6.7e-26  Score=184.43  Aligned_cols=142  Identities=23%  Similarity=0.274  Sum_probs=109.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. .....+++.++..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        71 ~~lv~E~~~~g~L~~~i-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~  146 (316)
T cd05620          71 LFFVMEFLNGGDLMFHI-QDKGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKEN  146 (316)
T ss_pred             EEEEECCCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence            5899999    454442 23456899999999999999999999998   999999999999965               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|||++|..||.......      ........      .+.
T Consensus       147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~------~~~~~~~~------~~~  214 (316)
T cd05620         147 VFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE------LFESIRVD------TPH  214 (316)
T ss_pred             ccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHHhC------CCC
Confidence                          2899999999999999999999999999999999986432211      11111100      111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHH-HHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMS-DVV  165 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-evl  165 (216)
                      .+.     ....++.+++.+||+.||++|+++. +++
T Consensus       215 ~~~-----~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         215 YPR-----WITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             CCC-----CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            111     1345688999999999999999984 565

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.93  E-value=8.8e-26  Score=177.33  Aligned_cols=149  Identities=23%  Similarity=0.278  Sum_probs=115.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++..+..++.+++.||+|||+++   ++|+||||+||+++.               
T Consensus        67 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~  143 (251)
T cd05041          67 IYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREE  143 (251)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccc
Confidence            6899999    566664444456899999999999999999999998   999999999999974               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|.+||.+.+..++.++|+||||++++++++ |..||........      .......     .
T Consensus       144 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~------~~~~~~~-----~  212 (251)
T cd05041         144 EGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT------RERIESG-----Y  212 (251)
T ss_pred             cCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH------HHHHhcC-----C
Confidence                            1899999988889999999999999999999 7777643322110      0001000     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ..     ..+...+..+.+++.+||+.+|++||++.|+++.|++
T Consensus       213 ~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~  251 (251)
T cd05041         213 RM-----PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI  251 (251)
T ss_pred             CC-----CCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence            00     0111245679999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.93  E-value=1.5e-25  Score=176.23  Aligned_cols=148  Identities=22%  Similarity=0.236  Sum_probs=114.6

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ..|+|+||    +|.++.......+++.++..++.|++.||.|||+.+   ++|+|++|+||+++.              
T Consensus        72 ~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~  148 (256)
T cd06612          72 DLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQ  148 (256)
T ss_pred             cEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchh
Confidence            35799999    666665545567899999999999999999999998   999999999999975              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|++||.+.+..++.++||||||+++|+|++|+.|+..........     . .     ..   .
T Consensus       149 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~-----~-~-----~~---~  214 (256)
T cd06612         149 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF-----M-I-----PN---K  214 (256)
T ss_pred             cccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh-----h-h-----cc---C
Confidence                           2899999988899999999999999999999999986432221100     0 0     00   0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .......+......+.+++.+||+.+|++||++.||++
T Consensus       215 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         215 PPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             CCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            00011112224567899999999999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.93  E-value=6.9e-26  Score=178.52  Aligned_cols=151  Identities=28%  Similarity=0.323  Sum_probs=115.3

Q ss_pred             ceeeeecc----cccccccCCC-CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            2 CKKLVYSK----LLDAANIDKK-RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      ..++||||    +|.++..... ..+++.++..++.|++.||+|||+++   ++|+||||+||+++.             
T Consensus        69 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~  145 (257)
T cd05040          69 PLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMR  145 (257)
T ss_pred             eEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccc
Confidence            35899999    5666533333 57899999999999999999999998   999999999999964             


Q ss_pred             -------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 -------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                         .|++||.+.+..++.++|||||||++|+|++ |..||.......  ......   ...   
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~---~~~---  217 (257)
T cd05040         146 ALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKID---KEG---  217 (257)
T ss_pred             cccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHH---hcC---
Confidence                               2899999988889999999999999999998 999975332211  111100   000   


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                          ...   ..+...+..+.+++.+||+.+|++||++.++++.|.+
T Consensus       218 ----~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~  257 (257)
T cd05040         218 ----ERL---ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE  257 (257)
T ss_pred             ----CcC---CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence                000   0011134578899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.93  E-value=8.6e-26  Score=179.29  Aligned_cols=150  Identities=23%  Similarity=0.306  Sum_probs=114.5

Q ss_pred             eeeeecc----cccccc-----cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------
Q 040682            3 KKLVYSK----LLDAAN-----IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~-----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------   64 (216)
                      .++||||    +|..+.     ......+++..+..++.|++.||+|||+++   ++|+|+||+||+++.+         
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg  158 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADFG  158 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCcc
Confidence            5889999    554442     123346899999999999999999999998   9999999999999751         


Q ss_pred             ----------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           65 ----------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        65 ----------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                            |++||.+.+..++.++|||||||++||+++ |..||.......  ....    .....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~--~~~~----~~~~~  232 (273)
T cd05035         159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE--IYDY----LRHGN  232 (273)
T ss_pred             ceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH----HHcCC
Confidence                                  789999888889999999999999999999 888875322111  1111    11110


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .     ...     +..+...+.+++.+||+.+|++||++.|+++.|+++
T Consensus       233 ~-----~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         233 R-----LKQ-----PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             C-----CCC-----CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            0     111     112456789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.93  E-value=6.9e-26  Score=181.09  Aligned_cols=149  Identities=25%  Similarity=0.345  Sum_probs=113.1

Q ss_pred             eeeeecc----cccccccCC--------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-
Q 040682            3 KKLVYSK----LLDAANIDK--------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-   63 (216)
                      .++||||    +|.++....              ...+++.+++.++.|++.||+|||+.+   ++|+||||+||+++. 
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~  158 (280)
T cd05092          82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQG  158 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCC
Confidence            5789999    566553222              135899999999999999999999998   999999999999964 


Q ss_pred             ------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhh
Q 040682           64 ------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGH  112 (216)
Q Consensus        64 ------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~  112 (216)
                                                    .|++||.+.+..++.++|||||||++||+++ |..||.......  ....
T Consensus       159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~  236 (280)
T cd05092         159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE--AIEC  236 (280)
T ss_pred             CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH--HHHH
Confidence                                          1889999998899999999999999999998 888874322211  0000


Q ss_pred             hhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          113 AWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                          .....     ...     .+..++..+.+++.+||+.+|++||++.+|++.|++
T Consensus       237 ----~~~~~-----~~~-----~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         237 ----ITQGR-----ELE-----RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             ----HHcCc-----cCC-----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence                00000     000     011144568899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.93  E-value=6.5e-26  Score=183.29  Aligned_cols=150  Identities=23%  Similarity=0.323  Sum_probs=114.3

Q ss_pred             eeeeecc----cccccccCC---------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDK---------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+||||    +|.++....               ...+++.++..++.|++.||+|||+++   ++||||||+||+++.
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili~~  172 (304)
T cd05101          96 LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLVTE  172 (304)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEEcC
Confidence            5799999    666553221               235788999999999999999999998   999999999999964


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~  111 (216)
                                                     .|+|||.+.+..++.++||||||+++|++++ |..|+......      
T Consensus       173 ~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------  246 (304)
T cd05101         173 NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE------  246 (304)
T ss_pred             CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH------
Confidence                                           1899999988889999999999999999998 67776432111      


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ...........     ..     .+..++..+.+++.+||+.+|++||++.|+++.|+++
T Consensus       247 ~~~~~~~~~~~-----~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~  296 (304)
T cd05101         247 ELFKLLKEGHR-----MD-----KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI  296 (304)
T ss_pred             HHHHHHHcCCc-----CC-----CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence            11111111100     00     0112556789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.93  E-value=1.4e-25  Score=177.73  Aligned_cols=150  Identities=25%  Similarity=0.346  Sum_probs=115.4

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++... ....+++.++..++.|++.||+|||+.+   ++|+||||+||+++.              
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~  151 (262)
T cd05071          75 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL  151 (262)
T ss_pred             cEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceee
Confidence            4799999    66666333 3346899999999999999999999998   999999999999864              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|++||...+..++.++||||||+++|++++ |..||.......      ........     .
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~------~~~~~~~~-----~  220 (262)
T cd05071         152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQVERG-----Y  220 (262)
T ss_pred             ccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH------HHHHHhcC-----C
Confidence                            1899999988889999999999999999999 777764322111      01111000     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ..     ..+.+.+..+.+++.+||+.+|++||++.++++.|+..
T Consensus       221 ~~-----~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         221 RM-----PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             CC-----CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            00     01122556789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=1.1e-25  Score=178.06  Aligned_cols=149  Identities=28%  Similarity=0.355  Sum_probs=115.6

Q ss_pred             eeeeecc----cccccccCC-CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDK-KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++.... ...+++.++..++.|++.||+|||+.+   ++|+||||+||+++.              
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~  152 (261)
T cd05068          76 IYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARV  152 (261)
T ss_pred             eeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEE
Confidence            5899999    666663332 346899999999999999999999998   999999999999864              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|++||...+..++.++||||||++++++++ |+.||.......      ........     .
T Consensus       153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~------~~~~~~~~-----~  221 (261)
T cd05068         153 IKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE------VLQQVDQG-----Y  221 (261)
T ss_pred             ccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHcC-----C
Confidence                            2899999988889999999999999999999 888875432111      11111111     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ...     .+...+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus       222 ~~~-----~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         222 RMP-----CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             CCC-----CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            000     011145678999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.93  E-value=1.1e-25  Score=177.17  Aligned_cols=149  Identities=22%  Similarity=0.276  Sum_probs=115.4

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++.. .....+++.++..++.|++.||.|||+.+   ++||||||+||+++.              
T Consensus        73 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~  149 (254)
T cd05083          73 LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARV  149 (254)
T ss_pred             cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCcccee
Confidence            5799999    6666633 33346899999999999999999999988   999999999999975              


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                  .|.+||.+.+..++.++|+||||+++|++++ |..||.......      ........     ..+..
T Consensus       150 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------~~~~~~~~-----~~~~~  218 (254)
T cd05083         150 GSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE------VKECVEKG-----YRMEP  218 (254)
T ss_pred             ccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH------HHHHHhCC-----CCCCC
Confidence                        1899999988889999999999999999998 888875432211      11111111     00111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                           +...+..+.+++.+||+.+|+.||++.++++.|++
T Consensus       219 -----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         219 -----PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             -----CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence                 11245678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.93  E-value=2.7e-25  Score=175.15  Aligned_cols=146  Identities=19%  Similarity=0.324  Sum_probs=111.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|+++.......+++..+..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~D  151 (259)
T cd05037          75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSD  151 (259)
T ss_pred             cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCC
Confidence            5899999    677775555557899999999999999999999998   999999999999852               


Q ss_pred             -----------------CCCChhhhhcC--CCCcchhhhhHHHHHHHHHhC-CCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 -----------------GYMPPEYALRG--FFSIKSDVFSFGVLMLEILSG-KKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 -----------------~y~aPE~~~~~--~~~~~~Dv~s~G~~l~ell~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                       .|++||.+.+.  .++.++||||||+++|++++| ..|+........  . .   .+...   
T Consensus       152 fg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~--~-~---~~~~~---  222 (259)
T cd05037         152 PGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK--E-R---FYQDQ---  222 (259)
T ss_pred             CCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH--H-H---HHhcC---
Confidence                             28999998876  788999999999999999994 566543321110  0 0   00000   


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                          ...+..     ....+.+++.+||..+|.+||++.+|++.|+
T Consensus       223 ----~~~~~~-----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         223 ----HRLPMP-----DCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             ----CCCCCC-----CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence                000000     1257889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=7.8e-26  Score=194.21  Aligned_cols=146  Identities=26%  Similarity=0.302  Sum_probs=112.5

Q ss_pred             eeeeecc----ccccccc---CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANI---DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++||||    +|.++..   ...+.+++..+..++.|++.||+|||+++   |+||||||+|||++.            
T Consensus       114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~DFGls  190 (496)
T PTZ00283        114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLGDFGFS  190 (496)
T ss_pred             EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEEecccC
Confidence            5799999    5555422   23456899999999999999999999998   999999999999964            


Q ss_pred             -------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 -------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                         .|+|||.+.+..++.++|||||||++|||++|+.||......     ..... ....    
T Consensus       191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~-----~~~~~-~~~~----  260 (496)
T PTZ00283        191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME-----EVMHK-TLAG----  260 (496)
T ss_pred             eeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHH-HhcC----
Confidence                               299999999999999999999999999999999998543211     01010 0001    


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ...+      .+...+.++.+++.+||+.+|.+||++.+++.+
T Consensus       261 ~~~~------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        261 RYDP------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             CCCC------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            0011      111245678999999999999999999998864

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.93  E-value=8.5e-26  Score=179.35  Aligned_cols=150  Identities=25%  Similarity=0.390  Sum_probs=116.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|+++.....+.+++.+++.++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~  156 (269)
T cd05065          80 VMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFL  156 (269)
T ss_pred             eEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCcccccc
Confidence            5899999    677775555567899999999999999999999998   999999999999864               


Q ss_pred             -------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 -------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                         .|++||.+.+..++.++||||||+++||+++ |..||......  ......    ...   
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i----~~~---  227 (269)
T cd05065         157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAI----EQD---  227 (269)
T ss_pred             ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHH----HcC---
Confidence                               1889999988899999999999999999886 88887533211  111111    000   


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                        ...     +.+.+++..+.+++.+||+.+|++||++.+|++.|++.
T Consensus       228 --~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         228 --YRL-----PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             --CcC-----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence              000     00112455688999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.93  E-value=9e-26  Score=180.30  Aligned_cols=152  Identities=22%  Similarity=0.230  Sum_probs=113.1

Q ss_pred             eeeeecc----ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++ .......+++..+..++.|++.||+|||+.+   ++||||||+||+++.              
T Consensus        68 ~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~  144 (277)
T cd05607          68 LCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVE  144 (277)
T ss_pred             EEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeee
Confidence            5899999    56555 2334456899999999999999999999998   999999999999975              


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++||||+||++||+++|..||........ ........         ....
T Consensus       145 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-~~~~~~~~---------~~~~  214 (277)
T cd05607         145 LKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-KEELKRRT---------LEDE  214 (277)
T ss_pred             cCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-HHHHHHHh---------hccc
Confidence                          29999999988899999999999999999999999864332111 00110100         0001


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      ....  ......++.+++..||+.+|++||++.|+++.+.
T Consensus       215 ~~~~--~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~  252 (277)
T cd05607         215 VKFE--HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPR  252 (277)
T ss_pred             cccc--cccCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence            1000  0114556899999999999999999977664333

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.93  E-value=1.8e-25  Score=176.66  Aligned_cols=149  Identities=26%  Similarity=0.392  Sum_probs=115.3

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++... ....+++..+..++.|++.||+|||+.+   ++|+||||+||+++.              
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~  151 (260)
T cd05069          75 IYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARL  151 (260)
T ss_pred             cEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceE
Confidence            5799999    56666332 3345899999999999999999999998   999999999999975              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|++||...+..++.++||||||+++|++++ |..||.......  .    .......     .
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~----~~~~~~~-----~  220 (260)
T cd05069         152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--V----LEQVERG-----Y  220 (260)
T ss_pred             ccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--H----HHHHHcC-----C
Confidence                            1899999988889999999999999999999 888875422111  1    1111110     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      .+.     .+...+..+.+++.+||+.+|++||++.+|++.|++
T Consensus       221 ~~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         221 RMP-----CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CCC-----CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            011     111245678999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=1.4e-25  Score=185.57  Aligned_cols=95  Identities=29%  Similarity=0.420  Sum_probs=83.3

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|..+.......+++.++..++.|++.||+|||+++   |+||||||+|||++.                
T Consensus       132 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  208 (357)
T PHA03209        132 TCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPV  208 (357)
T ss_pred             eEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccc
Confidence            5789999   565655555667999999999999999999999998   999999999999864                


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCC
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTA  100 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~  100 (216)
                                  .|+|||++.+..++.++|||||||++|||+++..++.
T Consensus       209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f  257 (357)
T PHA03209        209 VAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF  257 (357)
T ss_pred             cCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence                        2899999999899999999999999999998766553

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.93  E-value=7.5e-26  Score=181.69  Aligned_cols=133  Identities=26%  Similarity=0.406  Sum_probs=105.7

Q ss_pred             CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CCCCh
Q 040682           20 RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GYMPP   68 (216)
Q Consensus        20 ~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y~aP   68 (216)
                      +.+++.+++.++.|++.||+|||+.+   ++||||||+||+++.                               .|++|
T Consensus       122 ~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~ap  198 (290)
T cd05045         122 RALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAI  198 (290)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCH
Confidence            45889999999999999999999998   999999999999874                               28999


Q ss_pred             hhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHH
Q 040682           69 EYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA  147 (216)
Q Consensus        69 E~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  147 (216)
                      |...+..++.++||||||+++|||++ |..||......      ..+......     .....     +...+..+.+++
T Consensus       199 E~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i  262 (290)
T cd05045         199 ESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE------RLFNLLKTG-----YRMER-----PENCSEEMYNLM  262 (290)
T ss_pred             HHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH------HHHHHHhCC-----CCCCC-----CCCCCHHHHHHH
Confidence            99988889999999999999999998 88887543211      111111111     01111     111445788999


Q ss_pred             HhccccCCCCCCCHHHHHHHHccc
Q 040682          148 LLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       148 ~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ..||+.+|++||++.++++.|+++
T Consensus       263 ~~cl~~~P~~Rp~~~~i~~~l~~~  286 (290)
T cd05045         263 LTCWKQEPDKRPTFADISKELEKM  286 (290)
T ss_pred             HHHccCCcccCCCHHHHHHHHHHH
Confidence            999999999999999999999975

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=4e-25  Score=187.74  Aligned_cols=162  Identities=19%  Similarity=0.229  Sum_probs=112.8

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|..+.....+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.                
T Consensus       235 ~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~  311 (461)
T PHA03211        235 TCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFAR  311 (461)
T ss_pred             EEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecc
Confidence            5788998   555554444457999999999999999999999998   999999999999975                


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCc--cchhhhhhhhhccCcc----
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGS--FNLLGHAWDLWKDDRV----  122 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~----  122 (216)
                                     .|++||++.+..++.++|||||||++||+++|..++.......  ................    
T Consensus       312 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~  391 (461)
T PHA03211        312 GSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDE  391 (461)
T ss_pred             cccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccccc
Confidence                           2899999999999999999999999999999887654332211  1111111111111000    


Q ss_pred             -ccc----------------cccccccchhhH--HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          123 -HEL----------------IDPVITQDEISL--SMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       123 -~~~----------------~~~~~~~~~~~~--~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       ...                ..+......+..  .....+.+|+.+||+.||.+|||+.|++++
T Consensus       392 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        392 FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             CCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence             000                000000000110  123468899999999999999999999865

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.93  E-value=9e-26  Score=180.48  Aligned_cols=132  Identities=27%  Similarity=0.443  Sum_probs=103.7

Q ss_pred             CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CCCCh
Q 040682           20 RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GYMPP   68 (216)
Q Consensus        20 ~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y~aP   68 (216)
                      ..+++..+..++.|++.||+|||+.+   ++||||||.||+++.                               .|+||
T Consensus       119 ~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  195 (283)
T cd05091         119 STLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSP  195 (283)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCH
Confidence            45889999999999999999999998   999999999999864                               28999


Q ss_pred             hhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHH
Q 040682           69 EYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA  147 (216)
Q Consensus        69 E~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  147 (216)
                      |.+.+..++.++|||||||++|||++ |..||......      ............          ..+..++..+.+++
T Consensus       196 E~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~------~~~~~i~~~~~~----------~~~~~~~~~~~~li  259 (283)
T cd05091         196 EAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------DVIEMIRNRQVL----------PCPDDCPAWVYTLM  259 (283)
T ss_pred             HHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHHcCCcC----------CCCCCCCHHHHHHH
Confidence            99988889999999999999999998 77776532211      111111111100          11112556789999


Q ss_pred             HhccccCCCCCCCHHHHHHHHcc
Q 040682          148 LLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       148 ~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ..||+.+|++||++.+|++.|+.
T Consensus       260 ~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         260 LECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHhCCCcccCCCHHHHHHHhhC
Confidence            99999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.93  E-value=3.3e-26  Score=187.17  Aligned_cols=144  Identities=19%  Similarity=0.226  Sum_probs=111.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. ...+.+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        70 ~~lv~Ey~~~g~L~~~l-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~  145 (328)
T cd05593          70 LCFVMEYVNGGELFFHL-SRERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (328)
T ss_pred             EEEEEeCCCCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccC
Confidence            5899999    554442 33456899999999999999999999998   999999999999964               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++|||||||++|+|++|..||........      .......      ...
T Consensus       146 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~------~~~~~~~------~~~  213 (328)
T cd05593         146 ITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL------FELILME------DIK  213 (328)
T ss_pred             CCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH------HHHhccC------Ccc
Confidence                          28999999988999999999999999999999999854322110      0000000      011


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                      .     +......+.+++.+||+.+|++|+     ++.+++++
T Consensus       214 ~-----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         214 F-----PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             C-----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            1     111455788999999999999997     78888754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=5.7e-26  Score=185.28  Aligned_cols=150  Identities=22%  Similarity=0.250  Sum_probs=114.0

Q ss_pred             eeeeecc-ccccc-ccCCCCC-CChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK-LLDAA-NIDKKRL-LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey-~l~~~-~~~~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .|||+|| +...+ --...++ +++.++++|++++..||+|||.++   ||||||||+|+|++..               
T Consensus       185 ~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~  261 (576)
T KOG0585|consen  185 LYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGTVKISDFGVSNEFP  261 (576)
T ss_pred             eEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCcEEeeccceeeecc
Confidence            5999999 54444 2233344 999999999999999999999999   9999999999999762               


Q ss_pred             -------------------CCChhhhhcCC----CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           65 -------------------YMPPEYALRGF----FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        65 -------------------y~aPE~~~~~~----~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                         |+|||.+.++.    ...+.||||+|++||.++.|+.||.......  +            
T Consensus       262 ~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~--l------------  327 (576)
T KOG0585|consen  262 QGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE--L------------  327 (576)
T ss_pred             cCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH--H------------
Confidence                               99999998742    3478899999999999999999986433211  1            


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ...+++..+.-...+ +..+.+.+++.++|.+||++|.+..+|..+.--
T Consensus       328 ~~KIvn~pL~fP~~p-e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv  375 (576)
T KOG0585|consen  328 FDKIVNDPLEFPENP-EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV  375 (576)
T ss_pred             HHHHhcCcccCCCcc-cccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence            111222222111122 256788999999999999999999999876543

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.93  E-value=1.9e-25  Score=183.03  Aligned_cols=152  Identities=23%  Similarity=0.314  Sum_probs=115.8

Q ss_pred             eeeeecc----cccccccC---------------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANID---------------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~---------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+||||    +|.++...               ....+++.++..++.|++.||+|||+++   ++||||||+||+++.
T Consensus        93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~~  169 (334)
T cd05100          93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVTE  169 (334)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcC
Confidence            5789999    66665221               1235889999999999999999999998   999999999999974


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~  111 (216)
                                                     .|++||.+.+..++.++||||||+++|||++ |..||.......     
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----  244 (334)
T cd05100         170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-----  244 (334)
T ss_pred             CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-----
Confidence                                           1899999999899999999999999999998 777774322111     


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                       ..........     ...     +..+..++.+++.+||+.+|++||++.|+++.|+++..
T Consensus       245 -~~~~~~~~~~-----~~~-----~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         245 -LFKLLKEGHR-----MDK-----PANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             -HHHHHHcCCC-----CCC-----CCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence             1111111100     001     11145578899999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.93  E-value=1.5e-25  Score=182.33  Aligned_cols=143  Identities=24%  Similarity=0.231  Sum_probs=109.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. .....+++.++..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        71 ~~lv~e~~~gg~L~~~~-~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~  146 (316)
T cd05592          71 LFFVMEYLNGGDLMFHI-QSSGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKEN  146 (316)
T ss_pred             EEEEEcCCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence            5899999    555443 23446899999999999999999999998   999999999999964               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|||++|..||.......     .... ....      .+.
T Consensus       147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~-----~~~~-i~~~------~~~  214 (316)
T cd05592         147 MNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE-----LFDS-ILND------RPH  214 (316)
T ss_pred             CCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH-----HHHH-HHcC------CCC
Confidence                          2999999998899999999999999999999999986433211     0000 1000      011


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHH-HHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMS-DVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-evl~  166 (216)
                      .+     ......+.+++.+||+.+|.+||++. ++++
T Consensus       215 ~~-----~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         215 FP-----RWISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             CC-----CCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            11     11345678999999999999999875 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.93  E-value=7.4e-26  Score=183.06  Aligned_cols=151  Identities=25%  Similarity=0.291  Sum_probs=114.7

Q ss_pred             eeeeecc----cccccccCC---------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDK---------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+||||    +|.++....               ...+++.+++.++.|++.||+|||+++   ++||||||+|||++.
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~  159 (303)
T cd05088          83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGE  159 (303)
T ss_pred             ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecC
Confidence            6899999    566553211               235889999999999999999999998   999999999999964


Q ss_pred             ----------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhh
Q 040682           64 ----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAW  114 (216)
Q Consensus        64 ----------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~  114 (216)
                                                  .|++||.+.+..++.++|||||||++||+++ |..||.......  ....  
T Consensus       160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~--  235 (303)
T cd05088         160 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYEK--  235 (303)
T ss_pred             CCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH--HHHH--
Confidence                                        2899999988889999999999999999998 999885332211  0100  


Q ss_pred             hhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          115 DLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                        ....     .....     +......+.+++.+||+.+|++||++.++++.|+.+.
T Consensus       236 --~~~~-----~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~  281 (303)
T cd05088         236 --LPQG-----YRLEK-----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  281 (303)
T ss_pred             --HhcC-----CcCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence              1000     00000     0113456889999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=4.9e-26  Score=183.12  Aligned_cols=144  Identities=20%  Similarity=0.169  Sum_probs=110.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++..+..++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        76 ~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~  151 (291)
T cd05612          76 LYMLMEYVPGGELFSYLR-NSGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKL  151 (291)
T ss_pred             EEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhc
Confidence            6899999    5655533 3456899999999999999999999998   999999999999975               


Q ss_pred             -----------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccccc
Q 040682           64 -----------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQ  132 (216)
Q Consensus        64 -----------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (216)
                                 .|+|||++.+..++.++|||||||++|+|++|..||.......  .    ........      ..   
T Consensus       152 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~--~----~~~i~~~~------~~---  216 (291)
T cd05612         152 RDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG--I----YEKILAGK------LE---  216 (291)
T ss_pred             cCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--H----HHHHHhCC------cC---
Confidence                       2999999998899999999999999999999999986432211  0    11110110      00   


Q ss_pred             chhhHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 040682          133 DEISLSMLMRYVKVALLCVQETVADRPT-----MSDVVSM  167 (216)
Q Consensus       133 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  167 (216)
                        .+......+.+++.+||+.||.+|++     +.+++++
T Consensus       217 --~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         217 --FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             --CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence              11113456889999999999999995     7777644

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.93  E-value=3.1e-26  Score=186.91  Aligned_cols=144  Identities=18%  Similarity=0.228  Sum_probs=110.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. ...+.+++.+++.++.|++.||+|||+++   ++||||||+|||++.               
T Consensus        70 ~~lv~E~~~~~~L~~~l-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  145 (323)
T cd05595          70 LCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             EEEEEeCCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence            5899999    554442 33456899999999999999999999998   999999999999964               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++|||||||++|||++|..||........      ........      ..
T Consensus       146 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~------~~~~~~~~------~~  213 (323)
T cd05595         146 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL------FELILMEE------IR  213 (323)
T ss_pred             cCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH------HHHHhcCC------CC
Confidence                          29999999988999999999999999999999999864322111      00000000      01


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                      .     +...+..+.+++.+||+.+|++|+     ++.+++++
T Consensus       214 ~-----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         214 F-----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             C-----CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence            1     112456788999999999999998     78877653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.93  E-value=2.2e-25  Score=178.35  Aligned_cols=149  Identities=20%  Similarity=0.209  Sum_probs=111.6

Q ss_pred             eeeeecc----cccccc---cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAAN---IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~---~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++||||    +|....   ......+++.++..++.|++.||+|||+++   ++||||||+||+++.            
T Consensus        68 ~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~  144 (280)
T cd05608          68 LCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLA  144 (280)
T ss_pred             EEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccc
Confidence            5799999    555442   223456899999999999999999999998   999999999999864            


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||.+.+..++.++||||||+++|++++|+.||.........  .....        ...
T Consensus       145 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--~~~~~--------~~~  214 (280)
T cd05608         145 VELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--KELKQ--------RIL  214 (280)
T ss_pred             eecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH--HHHHH--------hhc
Confidence                             299999999999999999999999999999999998643322110  00000        000


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                      ....   ..+...+..+.+++.+||+.+|++||     ++.+++++
T Consensus       215 ~~~~---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         215 NDSV---TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             ccCC---CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence            1100   11112556789999999999999999     66777653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.93  E-value=9.6e-26  Score=179.86  Aligned_cols=149  Identities=21%  Similarity=0.305  Sum_probs=112.9

Q ss_pred             eeeeecc----cccccccCC---------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------
Q 040682            3 KKLVYSK----LLDAANIDK---------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------   63 (216)
                      .++||||    +|+++....         ...+++.++..++.|++.||+|||+.+   ++|+||||+||+++.      
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence            5799999    666653221         234678899999999999999999988   999999999999974      


Q ss_pred             -------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhh
Q 040682           64 -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLW  117 (216)
Q Consensus        64 -------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~  117 (216)
                                               .|+|||.+.+..++.++||||||+++||+++ |..||.......      .....
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~------~~~~~  234 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ------VLRFV  234 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHH
Confidence                                     1899999998889999999999999999999 677775432211      01111


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ......     ..     +...+..+.+++.+||+.+|++||++.|+++.|++
T Consensus       235 ~~~~~~-----~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         235 MEGGLL-----DK-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             HcCCcC-----CC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            111110     00     11144578999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=2e-25  Score=186.73  Aligned_cols=161  Identities=23%  Similarity=0.234  Sum_probs=113.9

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   .|..+. .....+++.+++.++.|++.||+|||+++   |+||||||+|||++.                
T Consensus       161 ~~lv~e~~~~~l~~~l-~~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~  236 (392)
T PHA03207        161 VCMVMPKYKCDLFTYV-DRSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLD  236 (392)
T ss_pred             EEEEehhcCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence            5788998   444443 44567999999999999999999999998   999999999999965                


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhhhhhhccCc------
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHAWDLWKDDR------  121 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~~~~~~~~~------  121 (216)
                                     .|+|||++.+..++.++|||||||++|||++|+.||.+...... ..............      
T Consensus       237 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~  316 (392)
T PHA03207        237 AHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQN  316 (392)
T ss_pred             cccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCc
Confidence                           28899999998999999999999999999999999876543321 11111110000000      


Q ss_pred             -----------cccccccccc--cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          122 -----------VHELIDPVIT--QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       122 -----------~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                                 ......+...  ...........+.+++.+||..+|++||++.|++.+
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence                       0000000000  000000124567889999999999999999999865

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.93  E-value=1.4e-25  Score=176.02  Aligned_cols=148  Identities=24%  Similarity=0.260  Sum_probs=115.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++.++..++.|++.||.|||+++   ++|+|+||+||+++.               
T Consensus        67 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~  143 (250)
T cd05085          67 IYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQE  143 (250)
T ss_pred             cEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceec
Confidence            5899999    666665444556899999999999999999999998   999999999999965               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|++||++.+..++.++||||||+++|++++ |..||.......  .    .......     ..
T Consensus       144 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--~----~~~~~~~-----~~  212 (250)
T cd05085         144 DDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--A----REQVEKG-----YR  212 (250)
T ss_pred             cccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--H----HHHHHcC-----CC
Confidence                           1899999988889999999999999999998 888875332111  0    0001110     00


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      ...     +...+..+.+++.+||+.+|++||++.++++.|.
T Consensus       213 ~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         213 MSC-----PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CCC-----CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            000     1114567899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.92  E-value=8.3e-26  Score=180.66  Aligned_cols=148  Identities=23%  Similarity=0.326  Sum_probs=110.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+.......+++.++..++.|++.||+|||+.+   ++|+||||+||+++.               
T Consensus        77 ~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~  153 (282)
T cd06643          77 LWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKN  153 (282)
T ss_pred             EEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccc
Confidence            5899999    555554444567999999999999999999999998   999999999999864               


Q ss_pred             --------------CCCChhhhh-----cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 --------------GYMPPEYAL-----RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 --------------~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                    .|++||++.     +..++.++|||||||++|++++|..||........     ..... ...   
T Consensus       154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-----~~~~~-~~~---  224 (282)
T cd06643         154 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV-----LLKIA-KSE---  224 (282)
T ss_pred             cccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH-----HHHHh-hcC---
Confidence                          289999874     34577899999999999999999999754332111     00000 000   


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        .+..   ..+...+..+.+++.+||+.+|.+||++.+++++
T Consensus       225 --~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  262 (282)
T cd06643         225 --PPTL---AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH  262 (282)
T ss_pred             --CCCC---CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              0010   0111245678999999999999999999988643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.92  E-value=9.9e-26  Score=179.96  Aligned_cols=152  Identities=25%  Similarity=0.351  Sum_probs=116.0

Q ss_pred             eeeeecc----cccccccCC-------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------
Q 040682            3 KKLVYSK----LLDAANIDK-------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------   63 (216)
                      .++++||    +|.++....       ...+++.++..++.|++.||+|||+.+   ++|+||||+||+++.        
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence            5788888    555552221       146899999999999999999999988   999999999999864        


Q ss_pred             -----------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhcc
Q 040682           64 -----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKD  119 (216)
Q Consensus        64 -----------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~  119 (216)
                                             .|+|||.+.+..++.++||||||+++||+++ |..||......  ....+    ...
T Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~----~~~  234 (280)
T cd05043         161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF--EMAAY----LKD  234 (280)
T ss_pred             CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH--HHHHH----HHc
Confidence                                   1899999988889999999999999999998 99988543221  11111    111


Q ss_pred             CccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          120 DRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                      .     .....     ...++..+.+++.+||..+|++||++.++++.|+.+..
T Consensus       235 ~-----~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         235 G-----YRLAQ-----PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             C-----CCCCC-----CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            1     00000     11134578999999999999999999999999997643

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.92  E-value=1.3e-25  Score=192.38  Aligned_cols=145  Identities=21%  Similarity=0.248  Sum_probs=111.7

Q ss_pred             eeeeecc----cccccc---cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAAN---IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~---~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .||||||    +|.++.   .....++++.++..++.|++.||+|||+++   |+||||||+|||++.            
T Consensus       140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla  216 (478)
T PTZ00267        140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFS  216 (478)
T ss_pred             EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCc
Confidence            6899999    665542   233456899999999999999999999998   999999999999975            


Q ss_pred             -------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 -------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                         .|+|||++.+..++.++|||||||++|+|++|..||.......     ...... .+..  
T Consensus       217 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~-----~~~~~~-~~~~--  288 (478)
T PTZ00267        217 KQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE-----IMQQVL-YGKY--  288 (478)
T ss_pred             eecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHH-hCCC--
Confidence                               2999999999899999999999999999999999985432111     101000 0000  


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                        .+      .+...+..+.+++.+||+.+|++||++.+++.
T Consensus       289 --~~------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        289 --DP------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             --CC------CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence              01      01114457899999999999999999999864

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.92  E-value=5.6e-25  Score=173.04  Aligned_cols=146  Identities=26%  Similarity=0.340  Sum_probs=113.6

Q ss_pred             eeeeecc----cccccccCC-CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDK-KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++.... ...+++.++..++.|++.||.|||+.+   ++|+|+||+||+++.              
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~  150 (256)
T cd08529          74 LNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKL  150 (256)
T ss_pred             EEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEccccccee
Confidence            6899999    676663332 457899999999999999999999998   999999999999875              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||+..+..++.++|+||||+++|++++|..||.......  ..   .. .....     .+
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~---~~-~~~~~-----~~  219 (256)
T cd08529         151 LSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA--LI---LK-IIRGV-----FP  219 (256)
T ss_pred             ccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HH---HH-HHcCC-----CC
Confidence                           1899999998889999999999999999999999986443111  00   00 00000     01


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..     +......+.+++.+||+.+|++||++.++++.
T Consensus       220 ~~-----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         220 PV-----SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             CC-----ccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            11     11245678999999999999999999998764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.92  E-value=4e-26  Score=181.12  Aligned_cols=137  Identities=24%  Similarity=0.276  Sum_probs=108.9

Q ss_pred             eeeecc-ccccc--ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC----------------
Q 040682            4 KLVYSK-LLDAA--NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------   64 (216)
Q Consensus         4 ~lV~Ey-~l~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~----------------   64 (216)
                      |||+|| +..++  +..+.+.+++..+..++.+|+.||.|||+++   |||||+||+|||++..                
T Consensus       101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~  177 (357)
T KOG0598|consen  101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLK  177 (357)
T ss_pred             EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence            899999 43333  5566788999999999999999999999999   9999999999999862                


Q ss_pred             -------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccc
Q 040682           65 -------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVIT  131 (216)
Q Consensus        65 -------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (216)
                                   |+|||++.+..|+..+|-||+|+++|||++|.+||...+....      .+....+.        +.
T Consensus       178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~------~~~I~~~k--------~~  243 (357)
T KOG0598|consen  178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKM------YDKILKGK--------LP  243 (357)
T ss_pred             CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHH------HHHHhcCc--------CC
Confidence                         9999999999999999999999999999999999975443221      11111111        00


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCC
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRP  159 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  159 (216)
                        ..+...+.+..+++.+.+..+|++|.
T Consensus       244 --~~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  244 --LPPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             --CCCccCCHHHHHHHHHHhccCHHHhc
Confidence              11111455788999999999999996

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.92  E-value=1.9e-25  Score=175.76  Aligned_cols=148  Identities=29%  Similarity=0.359  Sum_probs=115.9

Q ss_pred             eeeeecc----cccccccCC--------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------
Q 040682            3 KKLVYSK----LLDAANIDK--------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------   63 (216)
                      .++||||    +|.++....        ...+++.++..++.|++.||+|||+++   ++|+||||+||+++.       
T Consensus        71 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~  147 (262)
T cd00192          71 LYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKIS  147 (262)
T ss_pred             eEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEc
Confidence            5899999    677664443        467999999999999999999999998   999999999999976       


Q ss_pred             ------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhc
Q 040682           64 ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWK  118 (216)
Q Consensus        64 ------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~  118 (216)
                                              .|+|||.+.+..++.++||||+|++++++++ |..||.......      ......
T Consensus       148 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~  221 (262)
T cd00192         148 DFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE------VLEYLR  221 (262)
T ss_pred             ccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHH
Confidence                                    2899999988889999999999999999999 588876542111      111111


Q ss_pred             cCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          119 DDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      ...     ..     ..+...+.++.+++.+||+.+|.+||++.+++..|+
T Consensus       222 ~~~-----~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         222 KGY-----RL-----PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             cCC-----CC-----CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            100     00     111114567899999999999999999999998874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.92  E-value=1.8e-25  Score=176.71  Aligned_cols=149  Identities=25%  Similarity=0.357  Sum_probs=115.1

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++.. .....+++.++..++.|++.||+|||+.+   ++|+||||+||+++.              
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  151 (260)
T cd05067          75 IYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARL  151 (260)
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceee
Confidence            5899999    5555532 33456899999999999999999999998   999999999999975              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|++||.+.+..++.++||||||++++|+++ |..||.......  ....    ....     .
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~----~~~~-----~  220 (260)
T cd05067         152 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE--VIQN----LERG-----Y  220 (260)
T ss_pred             cCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH--HHHH----HHcC-----C
Confidence                            2899999988889999999999999999998 999986432211  1111    1111     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ....     +...+.++.+++.+||+.+|++||++.++++.|+.
T Consensus       221 ~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         221 RMPR-----PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCCC-----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            0001     11134579999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.92  E-value=1.4e-25  Score=178.17  Aligned_cols=151  Identities=24%  Similarity=0.287  Sum_probs=118.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.++..++.+++.||+|||+.+   ++|+||||+||+++.               
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~  157 (270)
T cd05056          81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYL  157 (270)
T ss_pred             cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeec
Confidence            5799999    677765444556899999999999999999999998   999999999999865               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|+|||.+....++.++||||||++++|+++ |..||.......  ....    .....     .
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~----~~~~~-----~  226 (270)
T cd05056         158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIGR----IENGE-----R  226 (270)
T ss_pred             ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHH----HHcCC-----c
Confidence                           2889999888889999999999999999986 999985443221  1111    11110     0


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      ...     +..++..+.+++.+||..+|++||++.++++.|+++.
T Consensus       227 ~~~-----~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         227 LPM-----PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             CCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            011     1124567899999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=4.8e-25  Score=184.35  Aligned_cols=160  Identities=18%  Similarity=0.200  Sum_probs=111.0

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++|+||   .|..+. .....+++.+++.++.|++.||+|||+++   |+||||||+|||++.                
T Consensus       158 ~~lv~e~~~~~L~~~l-~~~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~  233 (391)
T PHA03212        158 TCLILPRYKTDLYCYL-AAKRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPV  233 (391)
T ss_pred             eEEEEecCCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccc
Confidence            4788888   444442 23356899999999999999999999998   999999999999964                


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-----chhhhhhhhhcc-----
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-----NLLGHAWDLWKD-----  119 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-----~~~~~~~~~~~~-----  119 (216)
                                    .|+|||++.+..++.++|||||||++|||++|..|+........     ............     
T Consensus       234 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~  313 (391)
T PHA03212        234 DINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEF  313 (391)
T ss_pred             cccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhc
Confidence                          28899999998999999999999999999999988754332111     001111000000     


Q ss_pred             -----Ccccccc---------ccccccc-hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          120 -----DRVHELI---------DPVITQD-EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       120 -----~~~~~~~---------~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                           .......         .+..... ......+..+.+++.+||+.||.+|||+.|+++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        314 PIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             CcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence                 0000000         0000000 011124567899999999999999999999984

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.92  E-value=6.9e-25  Score=176.65  Aligned_cols=156  Identities=21%  Similarity=0.352  Sum_probs=112.1

Q ss_pred             eeeeecc----cccccccCC----------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----
Q 040682            3 KKLVYSK----LLDAANIDK----------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----   63 (216)
                      .++||||    +|.++....          ...+++.++..++.|++.||+|||+.+   ++|+||||+||+++.     
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Nili~~~~~~~  170 (296)
T cd05095          94 LCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNCLVGKNYTIK  170 (296)
T ss_pred             cEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheEEEcCCCCEE
Confidence            4799999    555552211          234788899999999999999999998   999999999999864     


Q ss_pred             --------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh--CCCCCCcCCCCccchhhhhhh
Q 040682           64 --------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS--GKKSTAVYNTGSFNLLGHAWD  115 (216)
Q Consensus        64 --------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~--g~~~~~~~~~~~~~~~~~~~~  115 (216)
                                                .|++||...+..++.++|||||||++||+++  |..||.......  .......
T Consensus       171 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~--~~~~~~~  248 (296)
T cd05095         171 IADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ--VIENTGE  248 (296)
T ss_pred             eccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH--HHHHHHH
Confidence                                      1788998888889999999999999999998  666764332211  1111111


Q ss_pred             hhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          116 LWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ...... .....+.      +..++..+.+++.+||+.+|++||++.+|++.|++
T Consensus       249 ~~~~~~-~~~~~~~------~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         249 FFRDQG-RQVYLPK------PALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             HHhhcc-ccccCCC------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            111100 0000011      11144678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.92  E-value=9.9e-26  Score=182.51  Aligned_cols=151  Identities=23%  Similarity=0.331  Sum_probs=115.2

Q ss_pred             eeeeecc----cccccccCC---------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDK---------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+||||    +|.++....               ...+++.+++.++.|++.||+|||+.+   ++|+||||+||+++.
T Consensus        99 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~~  175 (307)
T cd05098          99 LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTE  175 (307)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEEcC
Confidence            5899999    666653221               235899999999999999999999998   999999999999864


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~  111 (216)
                                                     .|+|||.+.+..++.++|||||||++|||++ |..||......      
T Consensus       176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~------  249 (307)
T cd05098         176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE------  249 (307)
T ss_pred             CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH------
Confidence                                           2899999988889999999999999999998 77777432211      


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      ...........     .     ..+.....++.+++.+||+.+|++||++.+|++.|+.+.
T Consensus       250 ~~~~~~~~~~~-----~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~  300 (307)
T cd05098         250 ELFKLLKEGHR-----M-----DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  300 (307)
T ss_pred             HHHHHHHcCCC-----C-----CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence            01111111100     0     011124567889999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.92  E-value=5.5e-25  Score=177.16  Aligned_cols=155  Identities=19%  Similarity=0.324  Sum_probs=111.1

Q ss_pred             eeeeecc----cccccccC-----------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----
Q 040682            3 KKLVYSK----LLDAANID-----------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----   63 (216)
                      .++||||    +|.++...           ....+++.++..++.|++.||+|||+.+   ++|+||||+||+++.    
T Consensus        92 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nill~~~~~~  168 (295)
T cd05097          92 LCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCLVGNHYTI  168 (295)
T ss_pred             cEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEEEcCCCcE
Confidence            5799999    55554211           1124788999999999999999999998   999999999999964    


Q ss_pred             ---------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh--CCCCCCcCCCCccchhhhhh
Q 040682           64 ---------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS--GKKSTAVYNTGSFNLLGHAW  114 (216)
Q Consensus        64 ---------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~--g~~~~~~~~~~~~~~~~~~~  114 (216)
                                                 .|+|||.+.+..++.++||||||+++++|++  +..||.......  ......
T Consensus       169 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~--~~~~~~  246 (295)
T cd05097         169 KIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ--VIENTG  246 (295)
T ss_pred             EecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH--HHHHHH
Confidence                                       1899999988889999999999999999988  555654332211  111111


Q ss_pred             hhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          115 DLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      ....... ......      .+...+..+.+++.+||+.+|++||++.+|++.|+
T Consensus       247 ~~~~~~~-~~~~~~------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         247 EFFRNQG-RQIYLS------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             Hhhhhcc-ccccCC------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            1010000 000000      00013457999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.92  E-value=1.5e-25  Score=180.54  Aligned_cols=154  Identities=15%  Similarity=0.179  Sum_probs=111.2

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++++|+   ++.+.. ......++..+..++.|++.||+|||+.+   ++||||||+|||++.                
T Consensus       102 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~~~l~DFGla~~~~  177 (294)
T PHA02882        102 RFILLEKLVENTKEIF-KRIKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNRGYIIDYGIASHFI  177 (294)
T ss_pred             EEEEEehhccCHHHHH-HhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCcEEEEEcCCceeec
Confidence            4667776   333332 22234578889999999999999999998   999999999999864                


Q ss_pred             --------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 --------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 --------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                          .|+|||...+..++.++|||||||+++|+++|..||..................     .
T Consensus       178 ~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~-----~  252 (294)
T PHA02882        178 IHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFI-----K  252 (294)
T ss_pred             cCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHH-----H
Confidence                                189999999889999999999999999999999999765322211100000000     0


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      .+........    .++..+.+++..||..+|++||++.++++.|.
T Consensus       253 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        253 RLHEGKIKIK----NANKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             HhhhhhhccC----CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence            0111111111    13567899999999999999999999998763

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=2e-25  Score=175.90  Aligned_cols=149  Identities=23%  Similarity=0.277  Sum_probs=115.1

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++.. .....+++.++..++.|++.||.|||+.+   ++|+||||+||+++.              
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~  151 (256)
T cd05039          75 LYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKE  151 (256)
T ss_pred             eEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccc
Confidence            5799999    6666633 33346899999999999999999999998   999999999999975              


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                  .|.+||.+.+..++.++||||||++++++++ |..||.......  .    ........     ... 
T Consensus       152 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~----~~~~~~~~-----~~~-  219 (256)
T cd05039         152 ASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--V----VPHVEKGY-----RME-  219 (256)
T ss_pred             cccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH--H----HHHHhcCC-----CCC-
Confidence                        2899999988889999999999999999997 888875332111  1    11111110     000 


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                          .+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus       220 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         220 ----APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             ----CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence                111245678999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.92  E-value=1.9e-25  Score=175.93  Aligned_cols=148  Identities=26%  Similarity=0.379  Sum_probs=114.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++..+..++.+++.||+|||+.+   ++|+|+||+||+++.               
T Consensus        74 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~  150 (256)
T cd05112          74 ICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFV  150 (256)
T ss_pred             eEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeec
Confidence            5799999    666665555567899999999999999999999998   999999999999964               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     +|++||.+.+..++.++||||||+++||+++ |..||.......  .    .......  .....
T Consensus       151 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~----~~~~~~~--~~~~~  222 (256)
T cd05112         151 LDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE--V----VETINAG--FRLYK  222 (256)
T ss_pred             ccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH--H----HHHHhCC--CCCCC
Confidence                           2889999988889999999999999999998 888875322111  0    1111100  01111


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      +..        .+..+.+++.+||+.+|++||++.++++.|+
T Consensus       223 ~~~--------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         223 PRL--------ASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             CCC--------CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            111        3457899999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.92  E-value=1.4e-25  Score=182.18  Aligned_cols=154  Identities=22%  Similarity=0.327  Sum_probs=116.8

Q ss_pred             eeeeecc----cccccccCC---------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDK---------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+||||    +|.++....               ...+++.++..++.|++.||.|||+++   ++|+||||+||+++.
T Consensus        93 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~~  169 (314)
T cd05099          93 LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVTE  169 (314)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEcC
Confidence            5899999    666653221               235899999999999999999999998   999999999999974


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~  111 (216)
                                                     .|++||.+.+..++.++||||||+++|++++ |..||.......     
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~-----  244 (314)
T cd05099         170 DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE-----  244 (314)
T ss_pred             CCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence                                           1899999988889999999999999999999 787774322111     


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                       ..........     ...     +..++.++.+++.+||+.+|++||++.++++.|++....+
T Consensus       245 -~~~~~~~~~~-----~~~-----~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~  297 (314)
T cd05099         245 -LFKLLREGHR-----MDK-----PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV  297 (314)
T ss_pred             -HHHHHHcCCC-----CCC-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence             1111111100     000     1114557889999999999999999999999999875433

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.92  E-value=2.1e-25  Score=178.06  Aligned_cols=153  Identities=24%  Similarity=0.313  Sum_probs=118.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.+........+++..+..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~  159 (279)
T cd05057          83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL  159 (279)
T ss_pred             eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccc
Confidence            5789999    666665555566999999999999999999999988   999999999999964               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|++||.+....++.++|+||||+++||+++ |..||.......  .    .........    
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~----~~~~~~~~~----  229 (279)
T cd05057         160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--I----PDLLEKGER----  229 (279)
T ss_pred             cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH--H----HHHHhCCCC----
Confidence                            1899999988889999999999999999998 999985432211  1    111111100    


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                       ...     +..+...+.+++.+||..+|+.||++.++++.|+.+...
T Consensus       230 -~~~-----~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         230 -LPQ-----PPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD  271 (279)
T ss_pred             -CCC-----CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence             000     111345688999999999999999999999999986443

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.92  E-value=9.2e-26  Score=170.79  Aligned_cols=149  Identities=21%  Similarity=0.272  Sum_probs=115.7

Q ss_pred             ceeeeecc-ccccc--ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            2 CKKLVYSK-LLDAA--NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         2 ~~~lV~Ey-~l~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      ++|||||+ ...++  .+-.+-..++..+-.+++|+++||.|+|.++   |+|||+||.|+|+..               
T Consensus        84 ~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvA  160 (355)
T KOG0033|consen   84 FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLA  160 (355)
T ss_pred             eeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceE
Confidence            57999999 32222  2233356788899999999999999999999   999999999999864               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      +|++||++...+|+..+|||+.|+++|-++.|.+||.+.....      .++.+..+.      
T Consensus       161 i~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r------lye~I~~g~------  228 (355)
T KOG0033|consen  161 IEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR------LYEQIKAGA------  228 (355)
T ss_pred             EEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH------HHHHHhccc------
Confidence                            3999999999999999999999999999999999986432211      122222221      


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      -..+..+++. ..+...+++.+||..||++|.|+.|.+.
T Consensus       229 yd~~~~~w~~-is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  229 YDYPSPEWDT-VTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             cCCCCcccCc-CCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            1122334444 6778899999999999999999998764

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.92  E-value=3e-25  Score=177.44  Aligned_cols=161  Identities=16%  Similarity=0.208  Sum_probs=111.1

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++|+||   +|..+.......+++.+++.++.|+++||+|||+++   ++|+||||+||+++.                
T Consensus        74 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  150 (284)
T cd07839          74 LTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFG  150 (284)
T ss_pred             eEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccC
Confidence            5899999   555554444556999999999999999999999998   999999999999864                


Q ss_pred             -------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhh----------hhhhhhcc
Q 040682           64 -------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLG----------HAWDLWKD  119 (216)
Q Consensus        64 -------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~----------~~~~~~~~  119 (216)
                                   .|+|||.+.+. .++.++|||||||++|+|++|..|+.........+..          ..|.....
T Consensus       151 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
T cd07839         151 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSK  230 (284)
T ss_pred             CCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhh
Confidence                         28999998775 4789999999999999999999886433221110000          00000000


Q ss_pred             C-ccc--cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          120 D-RVH--ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       120 ~-~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      . ...  ................+..+.+++.+||+.+|.+|||+.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            0 000  0000000000011114567889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.92  E-value=2.1e-25  Score=176.99  Aligned_cols=150  Identities=25%  Similarity=0.390  Sum_probs=117.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.++..++.|++.||+|||+.+   ++|+||||+||+++.               
T Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd05066          80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVL  156 (267)
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccc
Confidence            5899999    677775555567899999999999999999999998   999999999999864               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|++||.+.+..++.++|+||||+++|++++ |..||.......  ....    ....     
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--~~~~----~~~~-----  225 (267)
T cd05066         157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--VIKA----IEEG-----  225 (267)
T ss_pred             ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--HHHH----HhCC-----
Confidence                             1789999988889999999999999999886 999875433211  1111    1110     


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .....     +...+..+.+++.+||+.+|.+||++.++++.|++.
T Consensus       226 ~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         226 YRLPA-----PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             CcCCC-----CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            00000     111456789999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=7.7e-26  Score=185.23  Aligned_cols=151  Identities=19%  Similarity=0.230  Sum_probs=114.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. ...+.+++.++..++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        76 ~~lv~e~~~g~~L~~~l-~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~  151 (333)
T cd05600          76 LYLAMEYVPGGDFRTLL-NNLGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGI  151 (333)
T ss_pred             EEEEEeCCCCCCHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccc
Confidence            5899999    666663 33456899999999999999999999998   999999999999965               


Q ss_pred             -----------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc-cccc
Q 040682           64 -----------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID-PVIT  131 (216)
Q Consensus        64 -----------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  131 (216)
                                 .|+|||.+.+..++.++|||||||++|||++|..||........  ...    ...  ....+. +...
T Consensus       152 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~----i~~--~~~~~~~~~~~  223 (333)
T cd05600         152 VTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET--WEN----LKY--WKETLQRPVYD  223 (333)
T ss_pred             ccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH--HHH----HHh--ccccccCCCCC
Confidence                       29999999998999999999999999999999999864332111  000    000  000011 1110


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .  .....+..+.+++.+||..+|.+||++.+++++
T Consensus       224 ~--~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         224 D--PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             c--cccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            0  001245678999999999999999999999865

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.92  E-value=3.3e-26  Score=186.89  Aligned_cols=144  Identities=18%  Similarity=0.230  Sum_probs=110.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|..+. ...+.+++.++..++.|++.||+|||+ .+   |+||||||+|||++.              
T Consensus        70 ~~lv~E~~~~~~L~~~l-~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~  145 (325)
T cd05594          70 LCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKE  145 (325)
T ss_pred             EEEEEeCCCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCee
Confidence            5899999    444442 334568999999999999999999997 67   999999999999965              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||++.+..++.++|||||||++|+|++|..||........      .......      ..
T Consensus       146 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~------~~~i~~~------~~  213 (325)
T cd05594         146 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL------FELILME------EI  213 (325)
T ss_pred             cCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH------HHHHhcC------CC
Confidence                           29999999998999999999999999999999999864332110      0000000      00


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                      ..+     ......+.+++.+||+.+|++|+     ++.+++++
T Consensus       214 ~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         214 RFP-----RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             CCC-----CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            111     11345688999999999999997     88888754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.92  E-value=1.5e-25  Score=188.18  Aligned_cols=150  Identities=26%  Similarity=0.287  Sum_probs=122.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      -|+|||.    -|..++..++..++..+...++.|++.||+|||+..   ++||||..+|||+..               
T Consensus       465 ~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~  541 (974)
T KOG4257|consen  465 MWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYL  541 (974)
T ss_pred             eeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhc
Confidence            3899999    555667778888999999999999999999999998   999999999999975               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|+|||.+....++.++|||-||+.+||++. |..||.+.....               ....++
T Consensus       542 ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD---------------VI~~iE  606 (974)
T KOG4257|consen  542 EDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD---------------VIGHIE  606 (974)
T ss_pred             cccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc---------------eEEEec
Confidence                           2999999999999999999999999999976 999986544322               222222


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ..-.. +.++.|++.++.++.+||.++|.+||.+.|+...|...
T Consensus       607 nGeRl-P~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv  649 (974)
T KOG4257|consen  607 NGERL-PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV  649 (974)
T ss_pred             CCCCC-CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence            11111 22223888999999999999999999999999888754

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.92  E-value=2e-25  Score=182.44  Aligned_cols=144  Identities=24%  Similarity=0.297  Sum_probs=108.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|... ....+.+++.+++.++.|++.||+|||+++   ++||||||+|||++.               
T Consensus        71 ~~lv~e~~~~~~L~~~-~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~  146 (327)
T cd05617          71 LFLVIEYVNGGDLMFH-MQRQRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEG  146 (327)
T ss_pred             EEEEEeCCCCCcHHHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceec
Confidence            5899999    44444 233456999999999999999999999998   999999999999965               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhhhhhhccCcccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                    .|+|||++.+..++.++|||||||++|+|++|..||........ ..............       
T Consensus       147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------  219 (327)
T cd05617         147 LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP-------  219 (327)
T ss_pred             cCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC-------
Confidence                          28999999999999999999999999999999999964332221 11111111111110       


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTM  161 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  161 (216)
                       .   ..+...+..+.+++.+||+.+|++|+++
T Consensus       220 -~---~~p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         220 -I---RIPRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             -C---CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence             0   0111144567899999999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.92  E-value=2.5e-25  Score=179.44  Aligned_cols=145  Identities=22%  Similarity=0.324  Sum_probs=111.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.  ....+++.++..++.|++.||+|||+.+   ++|+||||+||+++.               
T Consensus        92 ~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~  166 (296)
T cd06654          92 LWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI  166 (296)
T ss_pred             EEEeecccCCCCHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhc
Confidence            6899999    566653  2345899999999999999999999998   999999999999964               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|++||.+.+..++.++|||||||++|++++|..||.........     .......      .+.
T Consensus       167 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~-----~~~~~~~------~~~  235 (296)
T cd06654         167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL-----YLIATNG------TPE  235 (296)
T ss_pred             cccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH-----HHHhcCC------CCC
Confidence                          289999998888899999999999999999999998543321110     0000000      011


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      +   ..+......+.+++.+||+.+|++||++.++++
T Consensus       236 ~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         236 L---QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             C---CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            1   111224566889999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.92  E-value=2.1e-25  Score=177.14  Aligned_cols=146  Identities=25%  Similarity=0.319  Sum_probs=109.6

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++... ....+++..+..++.|++.||+|||+++   ++|+|+||+||+++.              
T Consensus        84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~~~  160 (272)
T cd06637          84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQ  160 (272)
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCcee
Confidence            5899999    66665333 3356899999999999999999999998   999999999999975              


Q ss_pred             ---------------CCCChhhhhc-----CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 ---------------GYMPPEYALR-----GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 ---------------~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                     .|++||++.+     ..++.++|||||||++|||++|..||.........     .. ....   
T Consensus       161 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~-----~~-~~~~---  231 (272)
T cd06637         161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL-----FL-IPRN---  231 (272)
T ss_pred             cccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH-----HH-HhcC---
Confidence                           2899999863     35788999999999999999999998533211110     00 0000   


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                        ......    ....+..+.+++.+||+.+|.+||++.++++
T Consensus       232 --~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         232 --PAPRLK----SKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             --CCCCCC----CCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence              001111    1114456899999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.92  E-value=5.2e-25  Score=179.96  Aligned_cols=160  Identities=22%  Similarity=0.287  Sum_probs=111.7

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    ++.++.. .....+++..+..++.|++.||+|||+++   ++||||||+||+++.              
T Consensus        74 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~  150 (328)
T cd08226          74 LWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYS  150 (328)
T ss_pred             eEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhh
Confidence            4789999    5666533 23345899999999999999999999998   999999999999863              


Q ss_pred             ----------------------CCCChhhhhcC--CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh----
Q 040682           64 ----------------------GYMPPEYALRG--FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD----  115 (216)
Q Consensus        64 ----------------------~y~aPE~~~~~--~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~----  115 (216)
                                            .|++||++.+.  .++.++|||||||++|++++|..||................    
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~  230 (328)
T cd08226         151 LVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSP  230 (328)
T ss_pred             hhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCC
Confidence                                  18999998764  47899999999999999999999986543211100000000    


Q ss_pred             ------------------hhcc----Cccc-----cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          116 ------------------LWKD----DRVH-----ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       116 ------------------~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                                        ....    ....     ......+ ...........+.+++.+||+.+|++|||+.|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         231 LDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERL-RTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             ccccccchhhhhhccchhhhhcccccchhccccccccccccc-cchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence                              0000    0000     0000001 11112235678999999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.92  E-value=2.1e-25  Score=182.47  Aligned_cols=144  Identities=24%  Similarity=0.298  Sum_probs=108.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. .....+++..++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        71 ~~lv~E~~~~~~L~~~~-~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~  146 (329)
T cd05618          71 LFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  146 (329)
T ss_pred             EEEEEeCCCCCCHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence            5899999    454442 33456899999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc---chhhhhhhhhccCcccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF---NLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  126 (216)
                                    .|+|||++.+..++.++|||||||++|+|++|..||........   ....+.........     
T Consensus       147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-----  221 (329)
T cd05618         147 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-----  221 (329)
T ss_pred             cCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC-----
Confidence                          28999999999999999999999999999999999854322211   11111111111110     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTM  161 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  161 (216)
                       ..+     +......+.+++.+||+.+|++||++
T Consensus       222 -~~~-----p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         222 -IRI-----PRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             -CCC-----CCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence             011     11245568899999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.92  E-value=2.5e-25  Score=182.12  Aligned_cols=148  Identities=20%  Similarity=0.182  Sum_probs=109.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++. .....+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        80 ~~lv~e~~~~g~L~~~l-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~  155 (332)
T cd05614          80 LHLILDYVSGGEMFTHL-YQRDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (332)
T ss_pred             EEEEEeCCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence            5799999    444442 23456899999999999999999999998   999999999999965               


Q ss_pred             ---------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|+|||.+.+. .++.++|||||||++|||++|..||........  ..........      .+
T Consensus       156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~~~~~~~~~~------~~  227 (332)
T cd05614         156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT--QSEVSRRILK------CD  227 (332)
T ss_pred             cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC--HHHHHHHHhc------CC
Confidence                           28999999865 478899999999999999999999864332211  0011110000      01


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                      +..+     ......+.+++.+||+.||++||     ++.+++++
T Consensus       228 ~~~~-----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         228 PPFP-----SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             CCCC-----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence            1111     11445688999999999999999     66677643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.92  E-value=2.8e-25  Score=176.89  Aligned_cols=150  Identities=24%  Similarity=0.322  Sum_probs=113.9

Q ss_pred             ceeeeecc----cccccccC---------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----
Q 040682            2 CKKLVYSK----LLDAANID---------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----   63 (216)
                      ..++||||    +|.++...         ....+++.++..++.|++.||.|||+.+   ++|+||||+||+++.     
T Consensus        83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~k  159 (277)
T cd05032          83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVK  159 (277)
T ss_pred             CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEE
Confidence            36899999    66665221         1234788999999999999999999988   999999999999875     


Q ss_pred             --------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhh
Q 040682           64 --------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDL  116 (216)
Q Consensus        64 --------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~  116 (216)
                                                .|+|||.+.+..++.++|||||||++||+++ |..||.......  .    ...
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~----~~~  233 (277)
T cd05032         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--V----LKF  233 (277)
T ss_pred             ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH--H----HHH
Confidence                                      2889999988889999999999999999998 888875322111  1    111


Q ss_pred             hccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          117 WKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ......     +..+     ..++.++.+++.+||+.+|++||++.++++.|++
T Consensus       234 ~~~~~~-----~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         234 VIDGGH-----LDLP-----ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             HhcCCC-----CCCC-----CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence            111110     1111     1135678999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.92  E-value=4.6e-25  Score=180.03  Aligned_cols=143  Identities=21%  Similarity=0.256  Sum_probs=108.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|...  .....+++.++..++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        77 ~~lv~E~~~~~~L~~~--~~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05589          77 VCFVMEYAAGGDLMMH--IHTDVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEG  151 (324)
T ss_pred             EEEEEcCCCCCcHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence            5899999    44433  23456999999999999999999999998   999999999999965               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++|||||||++|+|++|..||........      ........      ..
T Consensus       152 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~------~~~i~~~~------~~  219 (324)
T cd05589         152 MGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV------FDSIVNDE------VR  219 (324)
T ss_pred             CCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhCC------CC
Confidence                          28999999998999999999999999999999999864322110      00010000      01


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                      .     +...+..+.+++.+||+.+|++||     ++.+++++
T Consensus       220 ~-----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         220 Y-----PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             C-----CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence            1     111345688999999999999999     46666553

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.92  E-value=8.9e-26  Score=184.24  Aligned_cols=138  Identities=24%  Similarity=0.275  Sum_probs=106.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. .....+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        76 ~~lv~E~~~~g~L~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05587          76 LYFVMEYVNGGDLMYHI-QQVGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKEN  151 (324)
T ss_pred             EEEEEcCCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence            5899999    554442 33456899999999999999999999998   999999999999964               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++||||+||++|+|++|+.||.......  ....    ....      ...
T Consensus       152 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~--~~~~----i~~~------~~~  219 (324)
T cd05587         152 IFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE--LFQS----IMEH------NVS  219 (324)
T ss_pred             CCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--HHHH----HHcC------CCC
Confidence                          2999999999999999999999999999999999986433211  1111    0000      011


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTM  161 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  161 (216)
                      .     +......+.+++.+||+.+|.+|++.
T Consensus       220 ~-----~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         220 Y-----PKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             C-----CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            1     11144568899999999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.92  E-value=9.6e-26  Score=183.83  Aligned_cols=138  Identities=25%  Similarity=0.301  Sum_probs=107.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. ...+.+++..+..++.|++.||+|||+++   ++||||||+|||++.               
T Consensus        71 ~~iv~Ey~~~g~L~~~i-~~~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~  146 (320)
T cd05590          71 LFFVMEFVNGGDLMFHI-QKSRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG  146 (320)
T ss_pred             EEEEEcCCCCchHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence            5899999    554442 33456899999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|+|++|..||.......  .    ........      ..
T Consensus       147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--~----~~~i~~~~------~~  214 (320)
T cd05590         147 IFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD--L----FEAILNDE------VV  214 (320)
T ss_pred             CcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH--H----HHHHhcCC------CC
Confidence                          2999999998899999999999999999999999986433211  0    11111110      00


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTM  161 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  161 (216)
                      .     +......+.+++.+||+.+|++||++
T Consensus       215 ~-----~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         215 Y-----PTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             C-----CCCCCHHHHHHHHHHcccCHHHCCCC
Confidence            0     11134568899999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.92  E-value=2e-25  Score=180.95  Aligned_cols=161  Identities=19%  Similarity=0.300  Sum_probs=112.9

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|..+.......+++.++..++.|++.||+|||+++   |+||||||+||+++.                
T Consensus        79 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  155 (309)
T cd07872          79 LTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKS  155 (309)
T ss_pred             EEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecC
Confidence            5899999   555554444556899999999999999999999998   999999999999975                


Q ss_pred             -------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chh--------hhhhhhhccC
Q 040682           64 -------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLL--------GHAWDLWKDD  120 (216)
Q Consensus        64 -------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~--------~~~~~~~~~~  120 (216)
                                   .|+|||.+.+. .++.++|||||||++|+|++|+.||........ ...        ...|+.....
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (309)
T cd07872         156 VPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSN  235 (309)
T ss_pred             CCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcch
Confidence                         28999988754 688999999999999999999999865443211 000        0011111100


Q ss_pred             ccccccc-cccccc---hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          121 RVHELID-PVITQD---EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       121 ~~~~~~~-~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ......+ +.....   .........+.+++.+|++.||.+|||+.|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         236 DEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             hhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            0000000 000000   000113556889999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.92  E-value=1.2e-25  Score=183.24  Aligned_cols=144  Identities=22%  Similarity=0.274  Sum_probs=110.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.... ...+.+++..+..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        71 ~~lv~E~~~~~~L~~~l-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~  146 (321)
T cd05591          71 LFFVMEYVNGGDLMFQI-QRSRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEG  146 (321)
T ss_pred             EEEEEeCCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceec
Confidence            5899999    554443 33456899999999999999999999998   999999999999965               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|+|++|+.||.......  ....    .....      ..
T Consensus       147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~--~~~~----i~~~~------~~  214 (321)
T cd05591         147 ILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD--LFES----ILHDD------VL  214 (321)
T ss_pred             ccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH--HHHH----HHcCC------CC
Confidence                          2999999998899999999999999999999999986433211  1111    10100      00


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCC-------CHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRP-------TMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-------s~~evl~~  167 (216)
                      .     +.....++.+++..||+.+|++|+       ++.+++++
T Consensus       215 ~-----p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         215 Y-----PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             C-----CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            0     111345788999999999999999       77777654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.5e-25  Score=188.86  Aligned_cols=146  Identities=25%  Similarity=0.398  Sum_probs=119.4

Q ss_pred             eeeecc----cccccccCCCCCC--ChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            4 KLVYSK----LLDAANIDKKRLL--DWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      -+.||-    +|..+++.+.+++  .+.+.-.+.+||++||.|||.+.   |+|||||-.|+|++-              
T Consensus       648 kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsK  724 (1226)
T KOG4279|consen  648 KIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSK  724 (1226)
T ss_pred             EEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccch
Confidence            466888    8999988889998  78888899999999999999988   999999999999964              


Q ss_pred             ----------------CCCChhhhhcC--CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 ----------------GYMPPEYALRG--FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 ----------------~y~aPE~~~~~--~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                      .|||||++.++  .|..++|||||||++.||.||++||..........+..       +     
T Consensus       725 RLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV-------G-----  792 (1226)
T KOG4279|consen  725 RLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV-------G-----  792 (1226)
T ss_pred             hhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh-------c-----
Confidence                            29999999876  68999999999999999999999996544332211100       0     


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                        ......+.+.+.+++...++++|+.++|.+||+++++++
T Consensus       793 --myKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  793 --MYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             --ceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence              011123455568889999999999999999999999985

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.92  E-value=2.2e-25  Score=180.23  Aligned_cols=151  Identities=25%  Similarity=0.312  Sum_probs=115.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++...+...+++..+..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~  159 (303)
T cd05110          83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (303)
T ss_pred             ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccc
Confidence            3578888    566654455556899999999999999999999998   999999999999964               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|++||.+.+..++.++||||||+++||+++ |..||......  ..    .........    
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~----~~~~~~~~~----  229 (303)
T cd05110         160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EI----PDLLEKGER----  229 (303)
T ss_pred             cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HH----HHHHHCCCC----
Confidence                            2899999988899999999999999999997 88887543211  11    111111100    


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                       ....     ..+...+.+++..||..+|++||++.++++.|+.+.
T Consensus       230 -~~~~-----~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         230 -LPQP-----PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             -CCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence             0000     113456889999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.92  E-value=1.5e-24  Score=174.70  Aligned_cols=161  Identities=21%  Similarity=0.254  Sum_probs=113.3

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      ..++||||   +|..+.......+++..+..++.|+++||+|||+++   ++|+||||+||+++.+              
T Consensus        76 ~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~  152 (298)
T cd07841          76 NINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSF  152 (298)
T ss_pred             EEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeec
Confidence            35899999   666664444347999999999999999999999998   9999999999999751              


Q ss_pred             ---------------CCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc---------
Q 040682           65 ---------------YMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD---------  119 (216)
Q Consensus        65 ---------------y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~---------  119 (216)
                                     |.|||.+.+ ..++.++|||||||+++++++|.++|........  ..........         
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  230 (298)
T cd07841         153 GSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ--LGKIFEALGTPTEENWPGV  230 (298)
T ss_pred             cCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH--HHHHHHHcCCCchhhhhhc
Confidence                           899998865 3678999999999999999999777654332110  1111000000         


Q ss_pred             Cccccccc----cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          120 DRVHELID----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       120 ~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ........    +..............+.+++.+||+.+|++||++.|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         231 TSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             ccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            00000000    0000011111245678999999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.92  E-value=1.1e-25  Score=183.23  Aligned_cols=144  Identities=23%  Similarity=0.250  Sum_probs=111.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.... .....+++.++..++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        71 ~~lv~e~~~~~~L~~~~-~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  146 (318)
T cd05570          71 LFFVMEYVNGGDLMFHI-QRSGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEG  146 (318)
T ss_pred             EEEEEcCCCCCCHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeec
Confidence            5899999    444442 33446999999999999999999999998   999999999999864               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|+|++|..||.......  .    ........      ..
T Consensus       147 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~--~----~~~i~~~~------~~  214 (318)
T cd05570         147 ILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE--L----FQSILEDE------VR  214 (318)
T ss_pred             CcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH--H----HHHHHcCC------CC
Confidence                          2899999999999999999999999999999999986433111  0    11111110      11


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTM-----SDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~evl~~  167 (216)
                      .     +...+..+.+++.+||+.+|++||++     .++++.
T Consensus       215 ~-----~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         215 Y-----PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             C-----CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            1     11145578999999999999999999     777653

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.92  E-value=6.9e-25  Score=179.75  Aligned_cols=97  Identities=30%  Similarity=0.496  Sum_probs=83.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.. ..+.+++..+..++.+++.||+|||+.+  +++|+||||+||+++.               
T Consensus        78 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~  154 (333)
T cd06650          78 ISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  154 (333)
T ss_pred             EEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhh
Confidence            6899999    6666633 3446899999999999999999999742  3999999999999975               


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcC
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVY  102 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~  102 (216)
                                  .|+|||.+.+..++.++|||||||++|++++|..||...
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~  205 (333)
T cd06650         155 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP  205 (333)
T ss_pred             hhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence                        299999999888999999999999999999999998644

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.92  E-value=1.4e-24  Score=161.98  Aligned_cols=143  Identities=19%  Similarity=0.124  Sum_probs=104.2

Q ss_pred             ccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------------CCCCh
Q 040682           11 LDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------------GYMPP   68 (216)
Q Consensus        11 l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------------~y~aP   68 (216)
                      |.++.....+.+++.+++.++.|++.||+|||+++         ||+||+++.                      .|+||
T Consensus         3 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~fG~~~~~~~~~~~g~~~y~aP   73 (176)
T smart00750        3 LADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKLDGSVAFKTPEQSRVDPYFMAP   73 (176)
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceeeccceEeeccccCCCcccccCh
Confidence            44554444567999999999999999999999875         999998864                      39999


Q ss_pred             hhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHH--HHHHH
Q 040682           69 EYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLM--RYVKV  146 (216)
Q Consensus        69 E~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l  146 (216)
                      |++.+..++.++|||||||++|||++|+.||............. ....     .. ..+..  .........  .+.++
T Consensus        74 E~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~-~~~~-----~~-~~~~~--~~~~~~~~~~~~~~~~  144 (176)
T smart00750       74 EVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEIL-LNGM-----PA-DDPRD--RSNLESVSAARSFADF  144 (176)
T ss_pred             HHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHH-HHHh-----cc-CCccc--cccHHHHHhhhhHHHH
Confidence            99999999999999999999999999999985433211111111 0000     00 00000  011111333  68999


Q ss_pred             HHhccccCCCCCCCHHHHHHHHccc
Q 040682          147 ALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       147 ~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      +.+||+.+|++||++.|+++++...
T Consensus       145 i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      145 MRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHHhcccccccCHHHHHHHHHHH
Confidence            9999999999999999999988764

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.92  E-value=4.2e-25  Score=174.63  Aligned_cols=149  Identities=23%  Similarity=0.347  Sum_probs=114.9

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      .|+||||    +|.++... ....+++.++..++.|++.||+|||+.+   ++|+||||+||+++.+             
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~  151 (260)
T cd05073          75 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV  151 (260)
T ss_pred             eEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceee
Confidence            5899999    56666332 3345889999999999999999999988   9999999999999751             


Q ss_pred             -----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 -----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 -----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       |++||.+.+..++.++|+||||++++++++ |..||.......  ..    ........    
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~----~~~~~~~~----  221 (260)
T cd05073         152 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VI----RALERGYR----  221 (260)
T ss_pred             ccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH--HH----HHHhCCCC----
Confidence                             899999988889999999999999999998 888875432111  11    11111100    


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                       .     +.....+.++.+++.+||+.+|++||++.++++.|+.
T Consensus       222 -~-----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         222 -M-----PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             -C-----CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence             0     0011245578999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.92  E-value=4.3e-25  Score=173.89  Aligned_cols=146  Identities=23%  Similarity=0.322  Sum_probs=112.6

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++... ....+++.+++.++.+++.||+|||+++   ++|+||||+||+++.              
T Consensus        75 ~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~  151 (257)
T cd08223          75 LYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARV  151 (257)
T ss_pred             EEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEE
Confidence            5799999    56555332 3446899999999999999999999998   999999999999864              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||+..+..++.++||||||++++++++|..||......     ....... .+..     +
T Consensus       152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-----~~~~~~~-~~~~-----~  220 (257)
T cd08223         152 LENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN-----SLVYRII-EGKL-----P  220 (257)
T ss_pred             ecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHH-hcCC-----C
Confidence                           289999999888999999999999999999999997532211     1111111 1101     1


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..     +......+.+++.+||+.+|++||++.+++++
T Consensus       221 ~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         221 PM-----PKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             CC-----ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            11     11255678999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.92  E-value=9.2e-26  Score=184.61  Aligned_cols=144  Identities=22%  Similarity=0.182  Sum_probs=109.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. ...+.+++..+..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        93 ~~lv~e~~~~~~L~~~l-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  168 (329)
T PTZ00263         93 VYFLLEFVVGGELFTHL-RKAGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKV  168 (329)
T ss_pred             EEEEEcCCCCChHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEc
Confidence            5899999    454443 23456899999999999999999999998   999999999999975               


Q ss_pred             -----------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccccc
Q 040682           64 -----------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQ  132 (216)
Q Consensus        64 -----------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (216)
                                 .|+|||++.+..++.++|||||||++|+|++|..||.......      .+........      ..  
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~~~i~~~~~------~~--  234 (329)
T PTZ00263        169 PDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR------IYEKILAGRL------KF--  234 (329)
T ss_pred             CCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH------HHHHHhcCCc------CC--
Confidence                       2999999999999999999999999999999999985432111      0111111100      00  


Q ss_pred             chhhHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 040682          133 DEISLSMLMRYVKVALLCVQETVADRPT-----MSDVVSM  167 (216)
Q Consensus       133 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  167 (216)
                         +......+.+++.+||+.||.+|++     +.+++.+
T Consensus       235 ---p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        235 ---PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             ---CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence               1113456789999999999999997     5776644

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.92  E-value=2.2e-25  Score=184.00  Aligned_cols=159  Identities=21%  Similarity=0.183  Sum_probs=111.4

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   ++....   ...+++.++..++.|++.||+|||+++   |+||||||+||+++.                
T Consensus        97 ~~lv~e~~~~~l~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~  170 (355)
T cd07874          97 VYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_pred             eEEEhhhhcccHHHHH---hhcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence            4899999   443332   234889999999999999999999998   999999999999975                


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc--hhh---------------hhh
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN--LLG---------------HAW  114 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~--~~~---------------~~~  114 (216)
                                  .|+|||++.+..++.++|||||||++|+|++|+.||.........  ...               ...
T Consensus       171 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (355)
T cd07874         171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR  250 (355)
T ss_pred             CccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHH
Confidence                        299999999989999999999999999999999998654321110  000               000


Q ss_pred             hhhccC-ccccccccc-----cc--cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          115 DLWKDD-RVHELIDPV-----IT--QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       115 ~~~~~~-~~~~~~~~~-----~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ...... .......+.     ..  ...........+.+++.+||+.||++|||+.|++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             HHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence            000000 000000000     00  001111134568899999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.92  E-value=2.4e-25  Score=186.51  Aligned_cols=133  Identities=23%  Similarity=0.338  Sum_probs=104.3

Q ss_pred             CCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CCCChh
Q 040682           21 LLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GYMPPE   69 (216)
Q Consensus        21 ~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y~aPE   69 (216)
                      .+++.++..++.|++.||+|||+.+   ++|+||||+||+++.                               .|+|||
T Consensus       233 ~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE  309 (400)
T cd05105         233 GLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPE  309 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChh
Confidence            5788899999999999999999998   999999999999864                               189999


Q ss_pred             hhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHH
Q 040682           70 YALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVAL  148 (216)
Q Consensus        70 ~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  148 (216)
                      .+.+..++.++|||||||++||+++ |..||........     ........     ....     .+..++..+.+++.
T Consensus       310 ~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-----~~~~~~~~-----~~~~-----~~~~~~~~l~~li~  374 (400)
T cd05105         310 SIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-----FYNKIKSG-----YRMA-----KPDHATQEVYDIMV  374 (400)
T ss_pred             hhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH-----HHHHHhcC-----CCCC-----CCccCCHHHHHHHH
Confidence            9998899999999999999999997 8888754321110     01111111     0010     11125567899999


Q ss_pred             hccccCCCCCCCHHHHHHHHccc
Q 040682          149 LCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       149 ~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      +||+.+|++||++.+|.+.|+.+
T Consensus       375 ~cl~~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         375 KCWNSEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             HHCccCHhHCcCHHHHHHHHHHH
Confidence            99999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.92  E-value=3.1e-25  Score=181.50  Aligned_cols=149  Identities=23%  Similarity=0.289  Sum_probs=110.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. ...+.+++..+..++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        71 ~~lv~e~~~~g~L~~~~-~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~  146 (329)
T cd05588          71 LFFVIEFVSGGDLMFHM-QRQRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEG  146 (329)
T ss_pred             EEEEEeCCCCCCHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCcccccc
Confidence            5899999    444442 33457999999999999999999999998   999999999999864               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCc---cchhhhhhhhhccCcccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGS---FNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  126 (216)
                                    .|+|||++.+..++.++|||||||++|++++|..||.......   .....+.........     
T Consensus       147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-----  221 (329)
T cd05588         147 IRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ-----  221 (329)
T ss_pred             ccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC-----
Confidence                          2899999999999999999999999999999999986432211   111111111111110     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCC------HHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPT------MSDVVS  166 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps------~~evl~  166 (216)
                       ..++     ...+..+.+++.+||+.+|.+|++      +.++++
T Consensus       222 -~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         222 -IRIP-----RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             -CCCC-----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence             0111     114456889999999999999998      456653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.92  E-value=1.4e-25  Score=182.57  Aligned_cols=143  Identities=25%  Similarity=0.305  Sum_probs=109.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. .....+++.++..++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        71 ~~lv~ey~~~g~L~~~l-~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~  146 (316)
T cd05619          71 LFFVMEYLNGGDLMFHI-QSCHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKEN  146 (316)
T ss_pred             EEEEEeCCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence            5799999    555543 23456899999999999999999999998   999999999999865               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|||++|..||.......  .    .......      .+.
T Consensus       147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--~----~~~i~~~------~~~  214 (316)
T cd05619         147 MLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE--L----FQSIRMD------NPC  214 (316)
T ss_pred             CCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH--H----HHHHHhC------CCC
Confidence                          2899999998899999999999999999999999986432211  0    1111000      111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHH-HHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMS-DVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-evl~  166 (216)
                      .+     ......+.+++.+||+.+|++||++. ++++
T Consensus       215 ~~-----~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         215 YP-----RWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             CC-----ccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            11     11345688999999999999999996 6653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.92  E-value=1.9e-25  Score=185.07  Aligned_cols=157  Identities=20%  Similarity=0.205  Sum_probs=111.2

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   ++....   ...+++.++..++.|++.||+|||+++   |+||||||+||+++.                
T Consensus       104 ~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  177 (364)
T cd07875         104 VYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG  177 (364)
T ss_pred             EEEEEeCCCCCHHHHH---HhcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence            4899999   444442   234889999999999999999999998   999999999999975                


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh----------------
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD----------------  115 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~----------------  115 (216)
                                  .|+|||++.+..++.++|||||||++|+|++|+.||........  ......                
T Consensus       178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  255 (364)
T cd07875         178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ--WNKVIEQLGTPCPEFMKKLQPT  255 (364)
T ss_pred             CCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCHHHHHhhhHH
Confidence                        29999999999999999999999999999999999965442111  000000                


Q ss_pred             ---hhccCc------ccccccccccc--chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          116 ---LWKDDR------VHELIDPVITQ--DEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       116 ---~~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                         ......      ...........  ..........+.+++.+|++.||.+|||+.|++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence               000000      00000000000  00011123568899999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.92  E-value=6.6e-25  Score=174.04  Aligned_cols=149  Identities=30%  Similarity=0.439  Sum_probs=113.3

Q ss_pred             eeeeecc----cccccccC------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------
Q 040682            3 KKLVYSK----LLDAANID------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------   63 (216)
                      .++||||    +|.++...      ....+++.++..++.|++.||+|||+.+   ++|+|+||+||+++.         
T Consensus        74 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~  150 (269)
T cd05044          74 QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVV  150 (269)
T ss_pred             eEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcce
Confidence            5899999    55555221      2234789999999999999999999988   999999999999763         


Q ss_pred             ---------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhh
Q 040682           64 ---------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWD  115 (216)
Q Consensus        64 ---------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~  115 (216)
                                                 .|++||.+.+..++.++||||||+++|++++ |..||.......  ....   
T Consensus       151 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--~~~~---  225 (269)
T cd05044         151 KIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--VLQH---  225 (269)
T ss_pred             EECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--HHHH---
Confidence                                       2789999998899999999999999999998 898875332111  1111   


Q ss_pred             hhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          116 LWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                       .....     ..     ..+...+..+.+++.+||+.+|++||++.++++.|++
T Consensus       226 -~~~~~-----~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         226 -VTAGG-----RL-----QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             -HhcCC-----cc-----CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence             10000     00     0111245678999999999999999999999998864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.92  E-value=3.4e-25  Score=178.04  Aligned_cols=147  Identities=22%  Similarity=0.324  Sum_probs=110.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|+.+.......+++.++..++.|++.||+|||+.+   ++|+|+||+||+++.               
T Consensus        84 ~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  160 (292)
T cd06644          84 LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKN  160 (292)
T ss_pred             EEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceec
Confidence            6899999    555554444567999999999999999999999998   999999999999974               


Q ss_pred             --------------CCCChhhhh-----cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 --------------GYMPPEYAL-----RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 --------------~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                    .|++||++.     ...++.++|||||||++|+|++|..||.......     ...... ..    
T Consensus       161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-----~~~~~~-~~----  230 (292)
T cd06644         161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-----VLLKIA-KS----  230 (292)
T ss_pred             cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-----HHHHHh-cC----
Confidence                          189999875     3357789999999999999999999985433211     000000 00    


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       ..+..   ..+......+.+++.+||+.+|++||++.++++
T Consensus       231 -~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         231 -EPPTL---SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             -CCccC---CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence             00111   111124557899999999999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=2e-25  Score=184.88  Aligned_cols=148  Identities=23%  Similarity=0.265  Sum_probs=111.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      -||||||   .|..++..+.+.+..-.++.+..||+.|+.++|..|   |||.|+||.|+|+-.                
T Consensus       435 lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVkG~LKLIDFGIA~aI~~  511 (677)
T KOG0596|consen  435 LYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVKGRLKLIDFGIANAIQP  511 (677)
T ss_pred             EEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEeeeEEeeeechhcccCc
Confidence            4899999   777776666555553478889999999999999999   999999999998855                


Q ss_pred             --------------CCCChhhhhcC-----------CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc
Q 040682           64 --------------GYMPPEYALRG-----------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK  118 (216)
Q Consensus        64 --------------~y~aPE~~~~~-----------~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~  118 (216)
                                    +||+||.+...           ....++||||+||++|+|+-|+.||.....           .+ 
T Consensus       512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-----------~~-  579 (677)
T KOG0596|consen  512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-----------QI-  579 (677)
T ss_pred             cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-----------HH-
Confidence                          39999988633           256899999999999999999999853211           01 


Q ss_pred             cCcccccccccc--ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          119 DDRVHELIDPVI--TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       119 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                       .++..+.+|..  .-...+  ...+++++|..||+.||++||++.|+|++=
T Consensus       580 -aKl~aI~~P~~~Iefp~~~--~~~~li~~mK~CL~rdPkkR~si~eLLqhp  628 (677)
T KOG0596|consen  580 -AKLHAITDPNHEIEFPDIP--ENDELIDVMKCCLARDPKKRWSIPELLQHP  628 (677)
T ss_pred             -HHHHhhcCCCccccccCCC--CchHHHHHHHHHHhcCcccCCCcHHHhcCc
Confidence             12334444422  111111  122389999999999999999999998653

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.92  E-value=4.8e-25  Score=174.76  Aligned_cols=150  Identities=20%  Similarity=0.251  Sum_probs=110.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. ...+.+++.++..++.|++.||.|||+.+   ++|+|+||.||+++.               
T Consensus        81 ~~iv~e~~~~~~L~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~  156 (267)
T cd06646          81 LWICMEYCGGGSLQDIY-HVTGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKI  156 (267)
T ss_pred             EEEEEeCCCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceee
Confidence            5899999    566553 23456899999999999999999999998   999999999999974               


Q ss_pred             --------------CCCChhhhh---cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 --------------GYMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 --------------~y~aPE~~~---~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                    .|++||.+.   ...++.++||||||+++|||++|..|+..........      .....    .+
T Consensus       157 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~------~~~~~----~~  226 (267)
T cd06646         157 TATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF------LMSKS----NF  226 (267)
T ss_pred             cccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe------eeecC----CC
Confidence                          289999875   3357889999999999999999999975332211100      00000    00


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                      .+...  ......+..+.+++.+||+.+|++||++.++++.|
T Consensus       227 ~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         227 QPPKL--KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             CCCCC--ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            01000  00111456789999999999999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.92  E-value=7e-25  Score=178.17  Aligned_cols=98  Identities=26%  Similarity=0.365  Sum_probs=81.3

Q ss_pred             eeeeecc---ccccccc--------CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------
Q 040682            3 KKLVYSK---LLDAANI--------DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------   63 (216)
                      .|+||||   +|..+..        .....+++..++.++.|++.||+|||+++   |+||||||+|||+..        
T Consensus        75 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~  151 (317)
T cd07868          75 VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRV  151 (317)
T ss_pred             EEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcE
Confidence            4789999   4433311        12235899999999999999999999998   999999999999821        


Q ss_pred             ----------------------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCC
Q 040682           64 ----------------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYN  103 (216)
Q Consensus        64 ----------------------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~  103 (216)
                                                  .|+|||++.+. .++.++||||+||++|+|++|++||....
T Consensus       152 kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~  220 (317)
T cd07868         152 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             EEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence                                        29999999875 58899999999999999999999986544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=8.3e-25  Score=172.74  Aligned_cols=149  Identities=28%  Similarity=0.371  Sum_probs=114.8

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++... ....+++.++..++.+++.||+|||+++   ++|+||||+||+++.              
T Consensus        76 ~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~  152 (261)
T cd05034          76 IYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARL  152 (261)
T ss_pred             eEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECcccccee
Confidence            5899999    66666333 3346899999999999999999999998   999999999999965              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|++||.+.+..++.++||||||++++++++ |+.||.......  ....    ....     .
T Consensus       153 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~----~~~~-----~  221 (261)
T cd05034         153 IEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE--VLEQ----VERG-----Y  221 (261)
T ss_pred             ccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH----HHcC-----C
Confidence                            2899999998889999999999999999998 888875332111  1111    1000     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ....     +...+..+.+++.+||+.+|++||+++++++.|+.
T Consensus       222 ~~~~-----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         222 RMPR-----PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCC-----CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            0001     11134568999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.92  E-value=3.8e-25  Score=176.78  Aligned_cols=146  Identities=23%  Similarity=0.313  Sum_probs=109.4

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++... ....+++..+..++.|++.||+|||+.+   ++|+|+||+||+++.              
T Consensus        94 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l~dfg~~~~  170 (282)
T cd06636          94 LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQ  170 (282)
T ss_pred             EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence            5899999    56666332 3345888999999999999999999998   999999999999975              


Q ss_pred             ---------------CCCChhhhh-----cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 ---------------GYMPPEYAL-----RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 ---------------~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                     .|+|||.+.     +..++.++||||||+++|++++|..||..........     .      ..
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~-----~------~~  239 (282)
T cd06636         171 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF-----L------IP  239 (282)
T ss_pred             hhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh-----h------Hh
Confidence                           289999876     3457889999999999999999999985432111100     0      00


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ....+...    ...++..+.+++.+||+.+|.+||++.|+++
T Consensus       240 ~~~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         240 RNPPPKLK----SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             hCCCCCCc----ccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            00001111    1124567999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.92  E-value=1.4e-25  Score=182.98  Aligned_cols=138  Identities=25%  Similarity=0.275  Sum_probs=106.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.... ...+.+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        76 ~~lv~E~~~~g~L~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~  151 (323)
T cd05616          76 LYFVMEYVNGGDLMYQI-QQVGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  151 (323)
T ss_pred             EEEEEcCCCCCCHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceec
Confidence            5799999    444442 33356899999999999999999999998   999999999999965               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|||++|+.||.......  ....    .....      ..
T Consensus       152 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~--~~~~----i~~~~------~~  219 (323)
T cd05616         152 MWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--LFQS----IMEHN------VA  219 (323)
T ss_pred             CCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH--HHHH----HHhCC------CC
Confidence                          2999999999999999999999999999999999986433211  1111    11110      01


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTM  161 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  161 (216)
                           .+.....++.+++.+|++.+|++|++.
T Consensus       220 -----~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         220 -----YPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             -----CCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence                 111245578899999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.92  E-value=6.2e-25  Score=181.66  Aligned_cols=159  Identities=21%  Similarity=0.192  Sum_probs=110.8

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   ++....   ...++..++..++.|++.||+|||+++   |+||||||+||+++.                
T Consensus       101 ~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~  174 (359)
T cd07876         101 VYLVMELMDANLCQVI---HMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAC  174 (359)
T ss_pred             eEEEEeCCCcCHHHHH---hccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence            4899999   433332   234889999999999999999999998   999999999999975                


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc-------------hh----hhhh
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN-------------LL----GHAW  114 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~-------------~~----~~~~  114 (216)
                                  .|+|||.+.+..++.++|||||||++|+|++|..||...+.....             ..    ....
T Consensus       175 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (359)
T cd07876         175 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVR  254 (359)
T ss_pred             cCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence                        299999999989999999999999999999999999754321100             00    0000


Q ss_pred             hhhccC------ccccccccccc--cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          115 DLWKDD------RVHELIDPVIT--QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       115 ~~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ......      ...+.+.....  ...........+.+++.+||+.||++|||+.|++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         255 NYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             HHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence            000000      00000000000  000111124568899999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.92  E-value=1.2e-24  Score=172.83  Aligned_cols=152  Identities=24%  Similarity=0.337  Sum_probs=108.0

Q ss_pred             eeeeecc----cccccccCC----CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----------
Q 040682            3 KKLVYSK----LLDAANIDK----KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----------   63 (216)
                      .|+||||    +|.++....    ....++.....++.|++.||+|||+++   |+||||||+||+++.           
T Consensus        70 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~  146 (269)
T cd05042          70 YLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGL  146 (269)
T ss_pred             eEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEecccc
Confidence            5899999    666663322    233567888999999999999999998   999999999999875           


Q ss_pred             --------------------CCCChhhhhc-------CCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhh
Q 040682           64 --------------------GYMPPEYALR-------GFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWD  115 (216)
Q Consensus        64 --------------------~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~  115 (216)
                                          .|+|||++..       ..++.++|||||||++||+++ |..||.......  .   ...
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~---~~~  221 (269)
T cd05042         147 ALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ--V---LKQ  221 (269)
T ss_pred             ccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH--H---HHH
Confidence                                1899998753       356789999999999999999 677765332111  0   000


Q ss_pred             hhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          116 LWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      ... ........+..     +......+.+++..|| .+|++||++++|++.|.
T Consensus       222 ~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         222 VVR-EQDIKLPKPQL-----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             Hhh-ccCccCCCCcc-----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            011 11111111111     1124566788899999 49999999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.92  E-value=2.7e-25  Score=181.11  Aligned_cols=139  Identities=22%  Similarity=0.253  Sum_probs=106.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.... .....+++.++..++.|++.||+|||+.+   |+||||||+||+++.               
T Consensus        71 ~~lv~e~~~~~~L~~~l-~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~  146 (321)
T cd05603          71 LYFVLDYVNGGELFFHL-QRERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (321)
T ss_pred             EEEEEcCCCCCCHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence            5899999    444432 33456889999999999999999999998   999999999999864               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++|||||||++|||++|..||...+...     . .......       + 
T Consensus       147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~-~~~i~~~-------~-  212 (321)
T cd05603         147 VEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ-----M-YDNILHK-------P-  212 (321)
T ss_pred             CCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH-----H-HHHHhcC-------C-
Confidence                          2999999998899999999999999999999999986432111     0 1111000       0 


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMS  162 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  162 (216)
                      .   ..+......+.+++.+||+.+|.+|+++.
T Consensus       213 ~---~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         213 L---QLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             C---CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            0   01111345688999999999999999863

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.92  E-value=9.1e-25  Score=180.33  Aligned_cols=147  Identities=24%  Similarity=0.357  Sum_probs=104.4

Q ss_pred             eeeeecc-cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------------
Q 040682            3 KKLVYSK-LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------   63 (216)
Q Consensus         3 ~~lV~Ey-~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------------   63 (216)
                      .++|||| ....+  .......+..+..++.|++.||+|||+++   ++||||||+|||++.                  
T Consensus       147 ~~lv~e~~~~~~L--~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~  221 (353)
T PLN00034        147 IQVLLEFMDGGSL--EGTHIADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQT  221 (353)
T ss_pred             EEEEEecCCCCcc--cccccCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence            5789999 22222  11234567888899999999999999998   999999999999975                  


Q ss_pred             -----------CCCChhhhhcC-----CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 -----------GYMPPEYALRG-----FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 -----------~y~aPE~~~~~-----~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                 .|+|||.+...     ..+.++|||||||++|||++|+.||........  ........ ..     ..
T Consensus       222 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~--~~~~~~~~-~~-----~~  293 (353)
T PLN00034        222 MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDW--ASLMCAIC-MS-----QP  293 (353)
T ss_pred             cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccH--HHHHHHHh-cc-----CC
Confidence                       28999987532     234689999999999999999999863222111  00000000 00     00


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      +.     .+.....++.+++.+||+.+|++||++.|++++
T Consensus       294 ~~-----~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        294 PE-----APATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             CC-----CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00     111245678999999999999999999999865

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.92  E-value=6.2e-25  Score=176.14  Aligned_cols=131  Identities=24%  Similarity=0.424  Sum_probs=102.3

Q ss_pred             CCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CCCChh
Q 040682           21 LLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GYMPPE   69 (216)
Q Consensus        21 ~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y~aPE   69 (216)
                      .+++.+++.++.|++.||+|||+++   ++|+||||+||+++.                               .|+|||
T Consensus       126 ~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  202 (288)
T cd05050         126 PLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPE  202 (288)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHH
Confidence            4788999999999999999999998   999999999999864                               189999


Q ss_pred             hhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHH
Q 040682           70 YALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVAL  148 (216)
Q Consensus        70 ~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  148 (216)
                      .+.+..++.++|||||||++|||++ |..||.......     . ..........    +      .+...+.++.+++.
T Consensus       203 ~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~-----~-~~~~~~~~~~----~------~~~~~~~~l~~li~  266 (288)
T cd05050         203 SIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE-----V-IYYVRDGNVL----S------CPDNCPLELYNLMR  266 (288)
T ss_pred             HHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----H-HHHHhcCCCC----C------CCCCCCHHHHHHHH
Confidence            9988899999999999999999997 777764322111     1 1111111110    0      01114467899999


Q ss_pred             hccccCCCCCCCHHHHHHHHcc
Q 040682          149 LCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       149 ~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      +||+.+|++||++.|+++.|++
T Consensus       267 ~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         267 LCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHcccCcccCCCHHHHHHHhhC
Confidence            9999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.92  E-value=2.1e-25  Score=201.39  Aligned_cols=144  Identities=19%  Similarity=0.224  Sum_probs=109.3

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      +.+.+|||   +|.+++....+.+++.+++.+++||+.||+|||+++   |+||||||+|||++.               
T Consensus        54 ~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g---IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~  130 (793)
T PLN00181         54 SIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQG---IVVHNVRPSCFVMSSFNHVSFIESASCSDS  130 (793)
T ss_pred             hhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCC---eeeccCCchhEEEcccCcEEEeeccccCcc
Confidence            34667888   788776555667999999999999999999999998   999999999999931               


Q ss_pred             -------------------------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh
Q 040682           64 -------------------------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS   94 (216)
Q Consensus        64 -------------------------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~   94 (216)
                                                                       .|+|||++.+..++.++|||||||++|||++
T Consensus       131 ~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~  210 (793)
T PLN00181        131 GSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFC  210 (793)
T ss_pred             cccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhh
Confidence                                                             1999999999999999999999999999999


Q ss_pred             CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682           95 GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus        95 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      |..|+.....    ....    ....    .+.+     .... ...+...++.+||+++|.+||++.|+++
T Consensus       211 ~~~~~~~~~~----~~~~----~~~~----~~~~-----~~~~-~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        211 PVSSREEKSR----TMSS----LRHR----VLPP-----QILL-NWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             CCCchhhHHH----HHHH----HHHh----hcCh-----hhhh-cCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence            8877532110    0000    0000    0000     0011 2334568889999999999999999975

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.3e-25  Score=176.28  Aligned_cols=148  Identities=22%  Similarity=0.334  Sum_probs=111.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|+++.......+++.++..++.|++.||+|||+++   ++|+|+||+||+++.               
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~  153 (280)
T cd06611          77 LWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKN  153 (280)
T ss_pred             EEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhh
Confidence            5899999    676665555567999999999999999999999998   999999999999874               


Q ss_pred             --------------CCCChhhhh-----cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 --------------GYMPPEYAL-----RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 --------------~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                    .|++||.+.     +..++.++|+||||+++|++++|..||........     ... .....   
T Consensus       154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~-----~~~-~~~~~---  224 (280)
T cd06611         154 KSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV-----LLK-ILKSE---  224 (280)
T ss_pred             cccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH-----HHH-HhcCC---
Confidence                          289999875     33577899999999999999999999854322110     000 00000   


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        .+..   ..+......+.+++..||+.+|++||++.++++.
T Consensus       225 --~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         225 --PPTL---DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             --CCCc---CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence              0111   1111245578899999999999999999998754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.92  E-value=5.6e-25  Score=175.09  Aligned_cols=151  Identities=27%  Similarity=0.353  Sum_probs=113.8

Q ss_pred             ceeeeecc----cccccccCCC--------CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------
Q 040682            2 CKKLVYSK----LLDAANIDKK--------RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~--------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------   63 (216)
                      ..++||||    +|.++.....        ..+++.++..++.|++.||+|||+++   ++|+||||+||+++.      
T Consensus        82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l  158 (275)
T cd05046          82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKV  158 (275)
T ss_pred             cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEE
Confidence            35899999    6666532222        26899999999999999999999998   999999999999974      


Q ss_pred             ------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhc
Q 040682           64 ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWK  118 (216)
Q Consensus        64 ------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~  118 (216)
                                              .|++||.+.+..++.++||||||++++++++ |..||.......  ...    ...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--~~~----~~~  232 (275)
T cd05046         159 SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--VLN----RLQ  232 (275)
T ss_pred             cccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--HHH----HHH
Confidence                                    1899999988888999999999999999998 677774322211  111    111


Q ss_pred             cCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          119 DDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      .+.....    .     +...+..+.+++.+||+.+|++||++.+++..|.+
T Consensus       233 ~~~~~~~----~-----~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~  275 (275)
T cd05046         233 AGKLELP----V-----PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE  275 (275)
T ss_pred             cCCcCCC----C-----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence            1111100    0     01144578999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=6.7e-25  Score=173.16  Aligned_cols=149  Identities=21%  Similarity=0.252  Sum_probs=113.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .|+||||    +|.++.......++..++..++.|++.||+|||+.+   ++|+|+||+||+++.+              
T Consensus        75 ~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~  151 (262)
T cd06613          75 LWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQL  151 (262)
T ss_pred             EEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhh
Confidence            5789999    666664444467999999999999999999999998   9999999999999851              


Q ss_pred             ---------------CCChhhhhcC---CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 ---------------YMPPEYALRG---FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 ---------------y~aPE~~~~~---~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                     |++||.+.+.   .++.++|+||||+++|+|++|..|+.........     .. ......   .
T Consensus       152 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~-----~~-~~~~~~---~  222 (262)
T cd06613         152 TATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL-----FL-ISKSNF---P  222 (262)
T ss_pred             hhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-----HH-HHhccC---C
Confidence                           8999998776   7889999999999999999999998643321110     00 000000   0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .+.+   ......+..+.+++.+||..+|..||++.+|+.
T Consensus       223 ~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         223 PPKL---KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             Cccc---cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0111   111225667899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.92  E-value=1.9e-24  Score=175.29  Aligned_cols=161  Identities=22%  Similarity=0.290  Sum_probs=112.8

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|+++.. .....+++..+..++.|++.||+|||+++   |+|+||||+||+++.              
T Consensus        74 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~  150 (314)
T cd08216          74 LYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVS  150 (314)
T ss_pred             EEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCcccee
Confidence            5889999    6666633 23456899999999999999999999998   999999999999975              


Q ss_pred             ----------------------CCCChhhhhcC--CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhh---
Q 040682           64 ----------------------GYMPPEYALRG--FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDL---  116 (216)
Q Consensus        64 ----------------------~y~aPE~~~~~--~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~---  116 (216)
                                            .|++||.+.+.  .++.++|||||||++||+++|..||........ ........   
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~  229 (314)
T cd08216         151 MIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM-LLEKVRGTVPC  229 (314)
T ss_pred             eccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCcc
Confidence                                  28999998764  578999999999999999999999865432211 00000000   


Q ss_pred             -hcc-------Ccccc----cccccc---ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          117 -WKD-------DRVHE----LIDPVI---TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       117 -~~~-------~~~~~----~~~~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       +..       .....    ..++..   ...........++.+++..||+.+|++||++.++++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         230 LLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             ccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence             000       00000    000000   0011122245678999999999999999999998853

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.92  E-value=6.9e-25  Score=182.26  Aligned_cols=159  Identities=21%  Similarity=0.249  Sum_probs=111.9

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   .|.... ...+.+++..+..++.|++.||+|||+++   ++||||||+|||++.                
T Consensus        79 ~~lv~e~~~~~l~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~  154 (372)
T cd07853          79 IYVVTELMQSDLHKII-VSPQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEE  154 (372)
T ss_pred             EEEEeeccccCHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecc
Confidence            5899999   444442 33456999999999999999999999998   999999999999975                


Q ss_pred             --------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcc------
Q 040682           64 --------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV------  122 (216)
Q Consensus        64 --------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------  122 (216)
                                    .|+|||.+.+. .++.++|||||||++|||++|+.||........  ...+.........      
T Consensus       155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~g~~~~~~~~~~  232 (372)
T cd07853         155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQ--LDLITDLLGTPSLEAMRSA  232 (372)
T ss_pred             cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHH--HHHHHHHcCCCCHHHHHHh
Confidence                          18999998875 578999999999999999999999865443211  0000000000000      


Q ss_pred             ----c-cccc-cccccc-----hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          123 ----H-ELID-PVITQD-----EISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       123 ----~-~~~~-~~~~~~-----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                          . .+.. +.....     .........+.+++.+||+.||++||++.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence                0 0000 000000     0111135678899999999999999999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.92  E-value=3.6e-26  Score=190.82  Aligned_cols=156  Identities=30%  Similarity=0.367  Sum_probs=124.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .|+|||+    +|++++......++..++..++.+.+.||+|||+++   +|||||..+|+|++.+              
T Consensus       236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~~~  312 (474)
T KOG0194|consen  236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSRAG  312 (474)
T ss_pred             cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccccCC
Confidence            4899999    888887777778999999999999999999999999   9999999999999762              


Q ss_pred             ---------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           65 ---------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        65 ---------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     |+|||.+....|+.++|||||||++||+.+ |..|+.+.....  ...+    .    .......
T Consensus       313 ~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~--v~~k----I----~~~~~r~  382 (474)
T KOG0194|consen  313 SQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE--VKAK----I----VKNGYRM  382 (474)
T ss_pred             cceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH--HHHH----H----HhcCccC
Confidence                           999999999999999999999999999998 777875433221  1111    1    0111111


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                      ..+.     ..+..+..++..||..+|+.||+|.++.+.|+.+.....
T Consensus       383 ~~~~-----~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  383 PIPS-----KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             CCCC-----CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            1111     255678889999999999999999999999998765554

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.92  E-value=3.6e-25  Score=186.16  Aligned_cols=142  Identities=26%  Similarity=0.307  Sum_probs=110.6

Q ss_pred             ceeeeecc-----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec-C------------
Q 040682            2 CKKLVYSK-----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD-S------------   63 (216)
Q Consensus         2 ~~~lV~Ey-----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~-~------------   63 (216)
                      .-|+|||+     +|+..  .....+. .++..|+.+|+.|+.|||++|   ++|||+||+|||++ .            
T Consensus       390 ~~~~v~e~l~g~ell~ri--~~~~~~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a  463 (612)
T KOG0603|consen  390 EIYLVMELLDGGELLRRI--RSKPEFC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFW  463 (612)
T ss_pred             eeeeeehhccccHHHHHH--HhcchhH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechh
Confidence            35899999     33333  3333333 777889999999999999998   99999999999994 2            


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    +|.|||++....++.++|+||||+++|+||+|+.||....... ..                 ...
T Consensus       464 ~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~-ei-----------------~~~  525 (612)
T KOG0603|consen  464 SELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI-EI-----------------HTR  525 (612)
T ss_pred             hhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH-HH-----------------HHh
Confidence                          3999999999999999999999999999999999986554431 00                 011


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      +.........+....+++.+||+.||.+|+++.+++..
T Consensus       526 i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  526 IQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             hcCCccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence            11111123367789999999999999999999998754

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.92  E-value=9.7e-25  Score=174.11  Aligned_cols=160  Identities=21%  Similarity=0.230  Sum_probs=114.6

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      ..++||||   ++......+...+++.++..++.|++.||+|||+.+   ++|+|+||+||+++.+              
T Consensus        72 ~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~  148 (283)
T cd05118          72 DLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSF  148 (283)
T ss_pred             CEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEec
Confidence            36899999   555554444467999999999999999999999998   9999999999999851              


Q ss_pred             ---------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc---Cccccc
Q 040682           65 ---------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD---DRVHEL  125 (216)
Q Consensus        65 ---------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  125 (216)
                                     |++||.+.+. .++.++|+||||+++|++++|+.||........  ..........   ......
T Consensus       149 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  226 (283)
T cd05118         149 GSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ--LFKIFRTLGTPDPEVWPKF  226 (283)
T ss_pred             CCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHcCCCchHhcccc
Confidence                           8899998877 789999999999999999999998854432111  0000000000   000000


Q ss_pred             cc---------c---ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          126 ID---------P---VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       126 ~~---------~---~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .+         +   .............++.+++.+||+.+|.+||++.+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         227 TSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             hhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            00         0   00001112235678999999999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.92  E-value=9e-25  Score=173.37  Aligned_cols=150  Identities=25%  Similarity=0.295  Sum_probs=113.8

Q ss_pred             eeeeecc----cccccc---cCCCCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeecC-----------
Q 040682            3 KKLVYSK----LLDAAN---IDKKRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDS-----------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~---~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~~-----------   63 (216)
                      .++||||    +|.++.   ......+++.+++.++.|++.||.|||+ .+   ++|+||+|.||+++.           
T Consensus        84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528          84 LYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             EEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEecccc
Confidence            5899999    565552   2344568999999999999999999996 56   999999999999975           


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|++||.+.+..++.++||||||+++|++++|..||.......     .... ......    
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~-----~~~~-~~~~~~----  230 (269)
T cd08528         161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS-----LATK-IVEAVY----  230 (269)
T ss_pred             eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH-----HHHH-HhhccC----
Confidence                             2899999998889999999999999999999999975322111     0000 000000    


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      .+..     .......+.+++.+||+.+|++||++.|+.+++++
T Consensus       231 ~~~~-----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~  269 (269)
T cd08528         231 EPLP-----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD  269 (269)
T ss_pred             CcCC-----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence            1100     01134578999999999999999999999998863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.92  E-value=5.7e-25  Score=173.23  Aligned_cols=146  Identities=18%  Similarity=0.274  Sum_probs=111.5

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      .|+||||    +|.++.. .....++...+..++.|++.||.|||+++   ++|+||||+||+++.+             
T Consensus        73 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~  149 (255)
T cd08219          73 LYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARL  149 (255)
T ss_pred             EEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCccee
Confidence            5899999    4544422 23446899999999999999999999998   9999999999999751             


Q ss_pred             ----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           65 ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        65 ----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                      |+|||++.+..++.++|+||||+++|+|++|..||......     ....... ....    .+
T Consensus       150 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-----~~~~~~~-~~~~----~~  219 (255)
T cd08219         150 LTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK-----NLILKVC-QGSY----KP  219 (255)
T ss_pred             ecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH-----HHHHHHh-cCCC----CC
Confidence                            89999998888999999999999999999999998532211     0111100 1100    00


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                            .+......+.+++.+||+.+|++||++.+++..
T Consensus       220 ------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         220 ------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             ------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence                  111244568899999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.92  E-value=2.1e-25  Score=183.28  Aligned_cols=144  Identities=19%  Similarity=0.178  Sum_probs=110.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ....+++..+..++.|++.||+|||+++   ++||||||+|||++.               
T Consensus       106 ~~lv~Ey~~~g~L~~~i~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~  181 (340)
T PTZ00426        106 LYLVLEFVIGGEFFTFLR-RNKRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVV  181 (340)
T ss_pred             EEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence            5899999    5555533 3346899999999999999999999998   999999999999965               


Q ss_pred             -----------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccccc
Q 040682           64 -----------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQ  132 (216)
Q Consensus        64 -----------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (216)
                                 .|+|||++.+..++.++|||||||++|||++|..||.......      ..........      ..  
T Consensus       182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~------~~~~i~~~~~------~~--  247 (340)
T PTZ00426        182 DTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL------IYQKILEGII------YF--  247 (340)
T ss_pred             CCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH------HHHHHhcCCC------CC--
Confidence                       2999999998889999999999999999999999986432211      0111111100      00  


Q ss_pred             chhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          133 DEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       133 ~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                         +......+.+++.+|++.+|.+|+     ++.+++++
T Consensus       248 ---p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        248 ---PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             ---CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence               111344578999999999999995     88888765

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.92  E-value=7.2e-25  Score=173.93  Aligned_cols=148  Identities=26%  Similarity=0.394  Sum_probs=110.7

Q ss_pred             eeeeecc----cccccccCCCCCC--ChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLL--DWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      .++|+||    +|.++.......+  +..++..++.|++.||+|||+++   ++|+|+||+||+++.             
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~  156 (268)
T cd06624          80 FKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTS  156 (268)
T ss_pred             EEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhh
Confidence            6899999    6777644444455  88889999999999999999998   999999999999963             


Q ss_pred             -----------------CCCChhhhhcC--CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 -----------------GYMPPEYALRG--FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 -----------------~y~aPE~~~~~--~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                       .|++||.+.+.  .++.++||||||+++|++++|..|+..........    +..   . .. 
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~----~~~---~-~~-  227 (268)
T cd06624         157 KRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM----FKV---G-MF-  227 (268)
T ss_pred             eecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH----hhh---h-hh-
Confidence                             28899998765  37899999999999999999999985432211100    000   0 00 


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ...+.+     +......+.+++.+||+.+|++||++.|+++.
T Consensus       228 ~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         228 KIHPEI-----PESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             ccCCCC-----CcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence            001111     12245678999999999999999999998763

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.92  E-value=5.6e-25  Score=177.59  Aligned_cols=161  Identities=18%  Similarity=0.236  Sum_probs=112.8

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|..+.......+++..+..++.|++.||+|||+.+   ++|+||||+||+++.                
T Consensus        79 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  155 (301)
T cd07873          79 LTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKS  155 (301)
T ss_pred             EEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccC
Confidence            5899999   666654455567899999999999999999999998   999999999999975                


Q ss_pred             -------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc-h--------hhhhhhhhccC
Q 040682           64 -------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN-L--------LGHAWDLWKDD  120 (216)
Q Consensus        64 -------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~-~--------~~~~~~~~~~~  120 (216)
                                   .|++||.+.+. .++.++||||||+++|+|++|+.||......... .        ....|......
T Consensus       156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (301)
T cd07873         156 IPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN  235 (301)
T ss_pred             CCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcc
Confidence                         18999988764 5788999999999999999999998654321110 0        00001110000


Q ss_pred             -ccccccccccccc---hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          121 -RVHELIDPVITQD---EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       121 -~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       .....-.+.....   .........+.+++.+|++.+|.+|||+.|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence             0000000100000   000113456789999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.92  E-value=1.9e-25  Score=182.34  Aligned_cols=144  Identities=24%  Similarity=0.261  Sum_probs=110.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. ...+.+.+..+..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        75 ~~lv~e~~~~~~L~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  150 (323)
T cd05584          75 LYLILEYLSGGELFMHL-EREGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKES  150 (323)
T ss_pred             EEEEEeCCCCchHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence            5899999    554443 33456889999999999999999999998   999999999999964               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++|||||||++|||++|+.||.......     . ........      ..
T Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~-----~-~~~~~~~~------~~  218 (323)
T cd05584         151 IHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK-----T-IDKILKGK------LN  218 (323)
T ss_pred             ccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH-----H-HHHHHcCC------CC
Confidence                          2999999998889999999999999999999999986433211     0 00000000      00


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                      +     +......+.+++.+||+.+|++||     ++.+++++
T Consensus       219 ~-----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         219 L-----PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             C-----CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence            1     111345688999999999999999     77777653

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=5.7e-25  Score=174.48  Aligned_cols=147  Identities=25%  Similarity=0.362  Sum_probs=110.3

Q ss_pred             eeeeecc----cccccccC---CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANID---KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .|+||||    +|.++...   ....+++..+..++.|++.||.|||+.+   ++|+|++|+||+++.            
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~~  160 (275)
T cd06608          84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGVS  160 (275)
T ss_pred             EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCccc
Confidence            5899999    66666222   2467899999999999999999999998   999999999999974            


Q ss_pred             -----------------CCCChhhhhcC-----CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           64 -----------------GYMPPEYALRG-----FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        64 -----------------~y~aPE~~~~~-----~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                       .|+|||.+...     .++.++||||||++++++++|..||........ .    .. .... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~----~~-~~~~-  233 (275)
T cd06608         161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA-L----FK-IPRN-  233 (275)
T ss_pred             eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH-H----HH-hhcc-
Confidence                             28999987542     467889999999999999999999853221110 0    00 0000 


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                          ..+.   ...+......+.+++.+||..+|++|||+.++++
T Consensus       234 ----~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         234 ----PPPT---LKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             ----CCCC---CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence                0011   1112225567899999999999999999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.91  E-value=2.2e-24  Score=170.55  Aligned_cols=152  Identities=24%  Similarity=0.390  Sum_probs=115.9

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeecC-------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      ..++|+||    +|.++.......++...+..++.|++.||+|||+ .+   ++|+||||+||+++.             
T Consensus        73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~  149 (265)
T cd06605          73 DISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSG  149 (265)
T ss_pred             EEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccch
Confidence            35899999    7777754444779999999999999999999999 87   999999999999985             


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|++||.+.+..++.++||||||+++|++++|..|+...................      ...+.
T Consensus       150 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------~~~~~  223 (265)
T cd06605         150 QLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN------EPPPR  223 (265)
T ss_pred             hhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc------CCCCC
Confidence                          2899999988899999999999999999999999986443221111111111110      00111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ...   . ....++.+++..||..+|++||++.+++.
T Consensus       224 ~~~---~-~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         224 LPS---G-KFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             CCh---h-hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            111   1 14567899999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.91  E-value=6e-25  Score=176.45  Aligned_cols=148  Identities=23%  Similarity=0.298  Sum_probs=109.9

Q ss_pred             eeeeecc----ccccccc---CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANI---DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .|+||||    +|.++..   .....+++..++.++.|++.||+|||+.+   ++|+||||+||+++.            
T Consensus        99 ~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~kl~dfg~~  175 (291)
T cd06639          99 LWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVKLVDFGVS  175 (291)
T ss_pred             eEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEeecccc
Confidence            6899999    6655522   23456899999999999999999999998   999999999999975            


Q ss_pred             -----------------CCCChhhhhcC-----CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           64 -----------------GYMPPEYALRG-----FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        64 -----------------~y~aPE~~~~~-----~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                       .|++||.+...     .++.++|||||||++|++++|+.||........ .    .. .....
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~-~----~~-~~~~~  249 (291)
T cd06639         176 AQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT-L----FK-IPRNP  249 (291)
T ss_pred             hhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-H----HH-HhcCC
Confidence                             28999987643     367899999999999999999999854321110 0    00 00000


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .     +..   ..+.+....+.+++.+||+.+|++||++.|++++
T Consensus       250 ~-----~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         250 P-----PTL---LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             C-----CCC---CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            0     011   0111244568999999999999999999999864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=2.4e-25  Score=187.82  Aligned_cols=145  Identities=26%  Similarity=0.276  Sum_probs=115.2

Q ss_pred             eeeeecc--ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK--LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey--~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      -|||+||  ..+.+ ....++++++.++.++++||+.|+.|+|+.+   |+|||+||+|+|++.                
T Consensus        87 lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~  163 (786)
T KOG0588|consen   87 LYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEV  163 (786)
T ss_pred             EEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeeccc
Confidence            4899999  22222 2355678999999999999999999999998   999999999999986                


Q ss_pred             ------------CCCChhhhhcCCCC-cchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 ------------GYMPPEYALRGFFS-IKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~-~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                  +|.+||+..|.+|. .++||||.|||+|-||+|+.||+..+  ...+...+..    +          
T Consensus       164 ~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN--ir~LLlKV~~----G----------  227 (786)
T KOG0588|consen  164 PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN--IRVLLLKVQR----G----------  227 (786)
T ss_pred             CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc--HHHHHHHHHc----C----------
Confidence                        39999999999887 78999999999999999999997222  1122222111    1          


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       ..+.+...+.+..+|+.+++..||+.|.++.||+++
T Consensus       228 -~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  228 -VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             -cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence             011223367789999999999999999999999875

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=9.6e-25  Score=175.03  Aligned_cols=149  Identities=23%  Similarity=0.192  Sum_probs=112.5

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++.. .....+++.++..++.|++.||+|||+.+   ++|+||||+||+++.              
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~  151 (285)
T cd05605          75 LCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVE  151 (285)
T ss_pred             EEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCcee
Confidence            5899999    5665532 23456999999999999999999999998   999999999999864              


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|++||++.+..++.++||||+|+++||+++|..||........  ........         ...
T Consensus       152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~--~~~~~~~~---------~~~  220 (285)
T cd05605         152 IPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK--REEVERRV---------KED  220 (285)
T ss_pred             cCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH--HHHHHHHh---------hhc
Confidence                          28999999988899999999999999999999999864332111  00000000         000


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                      .  ...+...+..+.+++.+||+.||++||     ++.+++++
T Consensus       221 ~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         221 Q--EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             c--cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            0  011112456789999999999999999     77787654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.91  E-value=2.7e-24  Score=170.77  Aligned_cols=152  Identities=25%  Similarity=0.299  Sum_probs=108.5

Q ss_pred             eeeeecc----cccccccC----CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----------
Q 040682            3 KKLVYSK----LLDAANID----KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----------   63 (216)
                      .++||||    +|.++...    ....+++..+..++.|++.||+|||+.+   ++|+||||.||+++.           
T Consensus        70 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~  146 (269)
T cd05087          70 YLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGL  146 (269)
T ss_pred             cEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccc
Confidence            5799999    66666322    2234677888899999999999999998   999999999999875           


Q ss_pred             --------------------CCCChhhhhcC-------CCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhh
Q 040682           64 --------------------GYMPPEYALRG-------FFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWD  115 (216)
Q Consensus        64 --------------------~y~aPE~~~~~-------~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~  115 (216)
                                          .|+|||++.+.       .++.++||||||+++||+++ |..||........  ....  
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~--~~~~--  222 (269)
T cd05087         147 SHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV--LTYT--  222 (269)
T ss_pred             cccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH--HHHH--
Confidence                                18999988642       35789999999999999996 9999864332211  0000  


Q ss_pred             hhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          116 LWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                       . .........+....     .....+.+++..|| .+|++||++.+|+..|+
T Consensus       223 -~-~~~~~~~~~~~~~~-----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         223 -V-REQQLKLPKPRLKL-----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             -h-hcccCCCCCCccCC-----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence             0 01111111122111     13446788999999 58999999999998875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.91  E-value=1.5e-24  Score=176.00  Aligned_cols=98  Identities=26%  Similarity=0.369  Sum_probs=80.8

Q ss_pred             eeeeecc---ccccccc--------CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec----C----
Q 040682            3 KKLVYSK---LLDAANI--------DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD----S----   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~----~----   63 (216)
                      .++||||   +|.++..        .....+++..+..++.|++.||+|||+.+   ++||||||+||++.    .    
T Consensus        75 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~  151 (317)
T cd07867          75 VWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRV  151 (317)
T ss_pred             EEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcE
Confidence            4789999   4433311        12235889999999999999999999998   99999999999982    1    


Q ss_pred             ----------------------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCC
Q 040682           64 ----------------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYN  103 (216)
Q Consensus        64 ----------------------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~  103 (216)
                                                  .|+|||.+.+. .++.++|||||||++|||++|.+||....
T Consensus       152 kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~  220 (317)
T cd07867         152 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             EEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence                                        28999998774 58899999999999999999999986544

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.91  E-value=1.5e-24  Score=173.35  Aligned_cols=162  Identities=19%  Similarity=0.189  Sum_probs=110.3

Q ss_pred             ceeeeecc---ccccccc--CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            2 CKKLVYSK---LLDAANI--DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      ..|+||||   +|.++..  .....+++.+++.++.|++.||+|||+.+   ++|+||||+||+++.             
T Consensus        73 ~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~  149 (285)
T cd07861          73 RLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLAR  149 (285)
T ss_pred             eEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECccccee
Confidence            36899999   4444422  22356899999999999999999999998   999999999999964             


Q ss_pred             ----------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccch---------hhhhhhhh
Q 040682           64 ----------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNL---------LGHAWDLW  117 (216)
Q Consensus        64 ----------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~---------~~~~~~~~  117 (216)
                                      .|+|||.+.+. .++.++||||||+++|++++|+.||..........         ....|...
T Consensus       150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
T cd07861         150 AFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV  229 (285)
T ss_pred             ecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcc
Confidence                            28999988764 57889999999999999999999986543211100         00000000


Q ss_pred             ccC-cccccccccccc--chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          118 KDD-RVHELIDPVITQ--DEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       118 ~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ... ............  .........++.+++.+||+.+|++||++.+|++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         230 TSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             hhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            000 000000000000  0000113567789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.91  E-value=1.7e-24  Score=172.13  Aligned_cols=147  Identities=20%  Similarity=0.240  Sum_probs=112.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.... ..+++.++..++.|++.||.|||+.+   ++|+||||+||+++.               
T Consensus        84 ~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~~  159 (267)
T PHA03390         84 HVLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCKI  159 (267)
T ss_pred             eEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence            5899999    666663333 37999999999999999999999998   999999999999964               


Q ss_pred             -----------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccccc
Q 040682           64 -----------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQ  132 (216)
Q Consensus        64 -----------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (216)
                                 .|+|||++.+..++.++||||||++++++++|..||............+....  .        ...  
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~--------~~~--  227 (267)
T PHA03390        160 IGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ--Q--------KKL--  227 (267)
T ss_pred             cCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh--c--------ccC--
Confidence                       28999999988899999999999999999999999874333221111111100  0        000  


Q ss_pred             chhhHHHHHHHHHHHHhccccCCCCCCC-HHHHHH
Q 040682          133 DEISLSMLMRYVKVALLCVQETVADRPT-MSDVVS  166 (216)
Q Consensus       133 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~evl~  166 (216)
                       .........+.+++.+||+.+|.+||+ ++++++
T Consensus       228 -~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        228 -PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             -CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence             011125667899999999999999996 588874

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.91  E-value=1.7e-25  Score=182.61  Aligned_cols=142  Identities=24%  Similarity=0.242  Sum_probs=108.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. ...+.+...++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        71 ~~lv~e~~~~~~L~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~  146 (325)
T cd05602          71 LYFVLDYINGGELFYHL-QRERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN  146 (325)
T ss_pred             EEEEEeCCCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence            5899999    454443 33456888999999999999999999998   999999999999964               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|+|++|..||.......     . +......        .
T Consensus       147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~-~~~i~~~--------~  212 (325)
T cd05602         147 IEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-----M-YDNILNK--------P  212 (325)
T ss_pred             ccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH-----H-HHHHHhC--------C
Confidence                          2899999999999999999999999999999999986432211     0 0101000        0


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVV  165 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl  165 (216)
                      ..   ........+.+++.+||+.+|.+|+++.+.+
T Consensus       213 ~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         213 LQ---LKPNITNSARHLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             cC---CCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence            00   0111445688999999999999999987433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.91  E-value=2.8e-24  Score=170.79  Aligned_cols=152  Identities=20%  Similarity=0.293  Sum_probs=107.0

Q ss_pred             eeeeecc----cccccccC---CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANID---KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .|+||||    +|.++...   ....+++..++.++.|++.||+|||+.+   ++|+||||+|||++.            
T Consensus        70 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~  146 (268)
T cd05086          70 YLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIG  146 (268)
T ss_pred             cEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccc
Confidence            5899999    56655322   2234677788899999999999999988   999999999999864            


Q ss_pred             -------------------CCCChhhhhc-------CCCCcchhhhhHHHHHHHHHhC-CCCCCcCCCCccchhhhhhhh
Q 040682           64 -------------------GYMPPEYALR-------GFFSIKSDVFSFGVLMLEILSG-KKSTAVYNTGSFNLLGHAWDL  116 (216)
Q Consensus        64 -------------------~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~ell~g-~~~~~~~~~~~~~~~~~~~~~  116 (216)
                                         .|++||++.+       ..++.++||||||+++|||+++ ..||......     ......
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-----~~~~~~  221 (268)
T cd05086         147 PSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR-----EVLNHV  221 (268)
T ss_pred             cccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH
Confidence                               2899998753       2457899999999999999974 5565432211     111111


Q ss_pred             hccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          117 WKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      . .+......++.....     ....+.+++..|| .+|++||++.+|++.|.
T Consensus       222 ~-~~~~~~~~~~~~~~~-----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         222 I-KDQQVKLFKPQLELP-----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             H-hhcccccCCCccCCC-----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            1 111222233333222     3456788999999 57999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.91  E-value=1e-24  Score=179.40  Aligned_cols=134  Identities=29%  Similarity=0.398  Sum_probs=103.6

Q ss_pred             CCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CCCChh
Q 040682           21 LLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GYMPPE   69 (216)
Q Consensus        21 ~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y~aPE   69 (216)
                      .+++.++..++.|++.||+|||+++   ++||||||.||+++.                               .|++||
T Consensus       175 ~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  251 (343)
T cd05103         175 VLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  251 (343)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcH
Confidence            4788899999999999999999998   999999999999964                               188999


Q ss_pred             hhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHH
Q 040682           70 YALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVAL  148 (216)
Q Consensus        70 ~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  148 (216)
                      .+.+..++.++||||||+++|++++ |..||........ .    ........     ....+.     ....++.+++.
T Consensus       252 ~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~----~~~~~~~~-----~~~~~~-----~~~~~~~~~~~  316 (343)
T cd05103         252 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-F----CRRLKEGT-----RMRAPD-----YTTPEMYQTML  316 (343)
T ss_pred             HhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-H----HHHHhccC-----CCCCCC-----CCCHHHHHHHH
Confidence            9988889999999999999999997 8888754322110 0    01111110     000110     13346899999


Q ss_pred             hccccCCCCCCCHHHHHHHHcccc
Q 040682          149 LCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       149 ~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      .||+.+|++||++.+|++.|+.+.
T Consensus       317 ~cl~~~p~~Rps~~eil~~l~~~~  340 (343)
T cd05103         317 DCWHGEPSQRPTFSELVEHLGNLL  340 (343)
T ss_pred             HHccCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=4e-25  Score=184.69  Aligned_cols=148  Identities=30%  Similarity=0.383  Sum_probs=119.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      -||||||   +-.|+...+++++.+.++..|..+.+.||+|||+.+   .||||||..|||++..               
T Consensus       101 aWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~  177 (948)
T KOG0577|consen  101 AWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMA  177 (948)
T ss_pred             HHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcC
Confidence            3899999   777777788889999999999999999999999998   9999999999999762               


Q ss_pred             ----------CCChhhhh---cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccc
Q 040682           65 ----------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVIT  131 (216)
Q Consensus        65 ----------y~aPE~~~---~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (216)
                                |||||++.   .+.|+.++||||+|+++.|+..+++|.+.-+.+  ...   +...      ..-.|++.
T Consensus       178 PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM--SAL---YHIA------QNesPtLq  246 (948)
T KOG0577|consen  178 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SAL---YHIA------QNESPTLQ  246 (948)
T ss_pred             chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH--HHH---HHHH------hcCCCCCC
Confidence                      99999986   447999999999999999999999986422211  111   1111      11135555


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                      .+.    ++..++.|+..||++.|.+|||..+++.+-
T Consensus       247 s~e----WS~~F~~Fvd~CLqKipqeRptse~ll~H~  279 (948)
T KOG0577|consen  247 SNE----WSDYFRNFVDSCLQKIPQERPTSEELLKHR  279 (948)
T ss_pred             Cch----hHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence            443    667899999999999999999999887653

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.91  E-value=2.7e-24  Score=171.54  Aligned_cols=144  Identities=24%  Similarity=0.367  Sum_probs=111.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.  ....+++.++..++.|++.||+|||+++   ++|+||+|+||+++.               
T Consensus        77 ~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~  151 (277)
T cd06642          77 LWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQL  151 (277)
T ss_pred             eEEEEEccCCCcHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccc
Confidence            6899999    555553  2356899999999999999999999998   999999999999864               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|++||.+.+..++.++||||||+++||+++|..|+........  .   . .....     ..+.
T Consensus       152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~---~-~~~~~-----~~~~  220 (277)
T cd06642         152 TDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--L---F-LIPKN-----SPPT  220 (277)
T ss_pred             cCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--H---h-hhhcC-----CCCC
Confidence                          28999999988899999999999999999999999753322111  0   0 00000     0111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .     ....+..+.+++.+||+.+|++||++.+++++
T Consensus       221 ~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         221 L-----EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             C-----CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            1     11245678899999999999999999999973

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=7.5e-24  Score=169.92  Aligned_cols=156  Identities=27%  Similarity=0.347  Sum_probs=114.0

Q ss_pred             eeeeecc----ccccc---ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAA---NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++||||    +|.++   .......++...+..++.|++.||+|||+.+   ++|+|++|.||+++.            
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~  152 (287)
T cd06621          76 IGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVS  152 (287)
T ss_pred             EEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeecccc
Confidence            5899999    55554   2234456899999999999999999999998   999999999999874            


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|++||...+..++.++|||++|+++|+|++|..||............. .............+.
T Consensus       153 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  231 (287)
T cd06621         153 GELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIEL-LSYIVNMPNPELKDE  231 (287)
T ss_pred             ccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHH-HHHHhcCCchhhccC
Confidence                           2899999988899999999999999999999999987553311111111 111111000000000


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       .   .........+.+++.+||+.+|++||++.|+++
T Consensus       232 -~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         232 -P---GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             -C---CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence             0   000114567899999999999999999999886

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.91  E-value=8.5e-26  Score=183.88  Aligned_cols=146  Identities=25%  Similarity=0.232  Sum_probs=110.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. .....+++.++..++.|++.||+|||+.+   ++||||||+||+++.               
T Consensus        73 ~~lv~e~~~~~~L~~~l-~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~  148 (318)
T cd05582          73 LYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKES  148 (318)
T ss_pred             EEEEEcCCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCccc
Confidence            5899999    454442 33456899999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|++||.+.+..++.++|||||||++|||++|+.||.......  ..   .... ...      ..
T Consensus       149 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~---~~i~-~~~------~~  216 (318)
T cd05582         149 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE--TM---TMIL-KAK------LG  216 (318)
T ss_pred             CCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH--HH---HHHH-cCC------CC
Confidence                          2899999998889999999999999999999999986432111  00   0000 000      00


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHH--HHHHHc
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSD--VVSMIS  169 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~e--vl~~L~  169 (216)
                      .     +......+.+++.+||+.+|++||++.+  +.+.++
T Consensus       217 ~-----p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~  253 (318)
T cd05582         217 M-----PQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKR  253 (318)
T ss_pred             C-----CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhC
Confidence            1     1113456889999999999999999655  444443

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.91  E-value=9e-25  Score=178.25  Aligned_cols=139  Identities=24%  Similarity=0.244  Sum_probs=107.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. ...+.+++..+..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        71 ~~lv~e~~~~g~L~~~l-~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~  146 (323)
T cd05575          71 LYFVLDYVNGGELFFHL-QRERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (323)
T ss_pred             EEEEEcCCCCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence            5899999    454442 23456899999999999999999999998   999999999999964               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++|||||||++|+|++|..||.......     . ........      ..
T Consensus       147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-----~-~~~i~~~~------~~  214 (323)
T cd05575         147 IEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE-----M-YDNILNKP------LR  214 (323)
T ss_pred             ccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH-----H-HHHHHcCC------CC
Confidence                          2999999999899999999999999999999999986432111     0 11110110      00


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMS  162 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  162 (216)
                      ...     .....+.+++.+||+.+|.+||++.
T Consensus       215 ~~~-----~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         215 LKP-----NISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             CCC-----CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            111     1345688999999999999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=3.7e-25  Score=180.97  Aligned_cols=144  Identities=22%  Similarity=0.218  Sum_probs=107.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. .....+++..+..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        71 ~~lv~e~~~~g~L~~~l-~~~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~  146 (330)
T cd05586          71 LYLVTDYMSGGELFWHL-QKEGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKAN  146 (330)
T ss_pred             EEEEEcCCCCChHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence            5899999    444442 33456899999999999999999999998   999999999999965               


Q ss_pred             --------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 --------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 --------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                    .|+|||++.+. .++.++|||||||++|+|++|..||.......      .+.....+.      .
T Consensus       147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~------~~~~i~~~~------~  214 (330)
T cd05586         147 LTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ------MYRNIAFGK------V  214 (330)
T ss_pred             CCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH------HHHHHHcCC------C
Confidence                          29999998765 58899999999999999999999986432211      111111110      0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCC----HHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPT----MSDVVS  166 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps----~~evl~  166 (216)
                      ..+..    .....+.+++.+||+.+|.+||+    +.++++
T Consensus       215 ~~~~~----~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         215 RFPKN----VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             CCCCc----cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            11111    13456789999999999999985    555544

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.91  E-value=1.4e-24  Score=173.74  Aligned_cols=149  Identities=23%  Similarity=0.325  Sum_probs=110.3

Q ss_pred             eeeeecc----cccccc---cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAAN---IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~---~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++||||    +|.++.   ......+++..+..++.|++.||.|||+.+   ++|+|+||+||+++.            
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~  171 (286)
T cd06638          95 LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKLVDFGVS  171 (286)
T ss_pred             EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEEccCCce
Confidence            5899999    666552   223456899999999999999999999998   999999999999875            


Q ss_pred             -----------------CCCChhhhhc-----CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           64 -----------------GYMPPEYALR-----GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        64 -----------------~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                       .|+|||.+..     ..++.++|||||||++|++++|+.|+........     ... .... 
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-----~~~-~~~~-  244 (286)
T cd06638         172 AQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-----LFK-IPRN-  244 (286)
T ss_pred             eecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-----Hhh-cccc-
Confidence                             2899998753     3578899999999999999999999854322110     000 0000 


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                          ..+...   .+..+...+.+++.+||+.+|++||++.||++.+
T Consensus       245 ----~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         245 ----PPPTLH---QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             ----CCCccc---CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence                001110   1111345689999999999999999999998753

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.91  E-value=3.1e-24  Score=171.23  Aligned_cols=161  Identities=20%  Similarity=0.221  Sum_probs=113.0

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      ..++||||   ++.+........+++.++..++.|++.||+|||+.+   ++|+||||.||+++.               
T Consensus        74 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~  150 (282)
T cd07831          74 RLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKDDILKLADFGSCRGIY  150 (282)
T ss_pred             cEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcCCCeEEEecccccccc
Confidence            36899999   444444444457899999999999999999999998   999999999999875               


Q ss_pred             ------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhh-----------hhhcc
Q 040682           64 ------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAW-----------DLWKD  119 (216)
Q Consensus        64 ------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~-----------~~~~~  119 (216)
                                  .|++||.+.+ ..++.++|||||||++|||++|..||........  .....           .....
T Consensus       151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  228 (282)
T cd07831         151 SKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ--IAKIHDVLGTPDAEVLKKFRK  228 (282)
T ss_pred             cCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH--HHHHHHHcCCCCHHHHHhhcc
Confidence                        2899997754 4578899999999999999999999865432111  00000           00000


Q ss_pred             Cccccccccccccc---hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          120 DRVHELIDPVITQD---EISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       120 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ........+.....   ......+..+.+++.+||+++|++||++.++++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence            00000000000000   0111246789999999999999999999998763

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=7.6e-25  Score=173.04  Aligned_cols=146  Identities=23%  Similarity=0.311  Sum_probs=111.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++. .....+++..+..++.|++.||+|||+.+   ++|+||+|+||+++.               
T Consensus        79 ~~~v~e~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~  154 (263)
T cd06625          79 LSIFMEYMPGGSVKDQL-KAYGALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRL  154 (263)
T ss_pred             EEEEEEECCCCcHHHHH-HHhCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceec
Confidence            5889999    555553 23356899999999999999999999998   999999999999975               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||.+.+..++.++||||||+++|++++|+.||.......     .........     .
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~~-----~  224 (263)
T cd06625         155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA-----AIFKIATQP-----T  224 (263)
T ss_pred             cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH-----HHHHHhccC-----C
Confidence                             1899999998889999999999999999999999975332111     000000000     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .+..     +......+.+++.+||+.+|++||++.+++++
T Consensus       225 ~~~~-----~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         225 NPQL-----PSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             CCCC-----CccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            0111     11245578899999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.91  E-value=7.8e-25  Score=179.93  Aligned_cols=158  Identities=23%  Similarity=0.284  Sum_probs=109.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+|+|+   +|..+.  ..+.+++.++..++.|++.||+|||+++   |+||||||+||+++.                
T Consensus        95 ~~~~~~~~~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~  169 (343)
T cd07878          95 VYLVTNLMGADLNNIV--KCQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQAD  169 (343)
T ss_pred             EEEEeecCCCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCccceecC
Confidence            4788888   555553  2346999999999999999999999998   999999999999975                


Q ss_pred             ----------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhh-----------ccCc
Q 040682           64 ----------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW-----------KDDR  121 (216)
Q Consensus        64 ----------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~  121 (216)
                                .|+|||++.+ ..++.++|||||||++|+|++|..||........  ........           ....
T Consensus       170 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  247 (343)
T cd07878         170 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ--LKRIMEVVGTPSPEVLKKISSEH  247 (343)
T ss_pred             CCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHhcchhh
Confidence                      2899999877 4688999999999999999999999865332111  00000000           0000


Q ss_pred             cccccc--cccccchh---hHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          122 VHELID--PVITQDEI---SLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       122 ~~~~~~--~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ....+.  +.......   -......+.+++.+|++.||++|||+.|++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         248 ARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             HHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            000000  00000000   00123457899999999999999999999854

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.91  E-value=6.7e-25  Score=176.97  Aligned_cols=146  Identities=22%  Similarity=0.302  Sum_probs=111.4

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ..|+|+||    +|..+..  ...+++.++..++.+++.||+|||+.+   ++|+||||+||+++.              
T Consensus        90 ~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~  164 (296)
T cd06655          90 ELFVVMEYLAGGSLTDVVT--ETCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQ  164 (296)
T ss_pred             eEEEEEEecCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchh
Confidence            36899999    5555532  345899999999999999999999998   999999999999974              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|++||.+.+..++.++|||||||++|++++|..||........  ....   .... .     +
T Consensus       165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~--~~~~---~~~~-~-----~  233 (296)
T cd06655         165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LYLI---ATNG-T-----P  233 (296)
T ss_pred             cccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHH---HhcC-C-----c
Confidence                           28999999888899999999999999999999999864432111  0000   0000 0     0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ..   ..+......+.+++.+||+.+|.+||++.++++
T Consensus       234 ~~---~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         234 EL---QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             cc---CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            00   011124456889999999999999999999883

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.91  E-value=1.1e-24  Score=178.22  Aligned_cols=148  Identities=18%  Similarity=0.269  Sum_probs=111.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++..+..++.|++.||+|||+.+   |+||||||+||+++.               
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~  152 (330)
T cd05601          76 LYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARL  152 (330)
T ss_pred             EEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeEC
Confidence            6899999    676665555567999999999999999999999998   999999999999975               


Q ss_pred             ---------------CCCChhhhh------cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcc
Q 040682           64 ---------------GYMPPEYAL------RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV  122 (216)
Q Consensus        64 ---------------~y~aPE~~~------~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (216)
                                     .|+|||++.      +..++.++|||||||++|+|++|..||.......     ...........
T Consensus       153 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-----~~~~i~~~~~~  227 (330)
T cd05601         153 TANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-----TYNNIMNFQRF  227 (330)
T ss_pred             CCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-----HHHHHHcCCCc
Confidence                           299999987      4467899999999999999999999986432211     00110111100


Q ss_pred             ccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          123 HELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ...  +      ........+.+++..|++ +|.+||++.+++++
T Consensus       228 ~~~--~------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         228 LKF--P------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             cCC--C------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence            000  0      001144568889999998 99999999998853

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.91  E-value=9.8e-25  Score=171.67  Aligned_cols=146  Identities=25%  Similarity=0.300  Sum_probs=112.1

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++... ....+++..+..++.+++.||+|||+++   ++|+|+||+||+++.              
T Consensus        74 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~  150 (256)
T cd08220          74 LMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISK  150 (256)
T ss_pred             EEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCce
Confidence            5899999    66666433 2345899999999999999999999998   999999999999963              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|++||.+.+..++.++||||||+++|++++|..||.......  .....   . ....     .
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--~~~~~---~-~~~~-----~  219 (256)
T cd08220         151 ILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--LVLKI---M-SGTF-----A  219 (256)
T ss_pred             ecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--HHHHH---H-hcCC-----C
Confidence                           2899999988888999999999999999999999975432211  11000   0 0000     0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..     +......+.+++.+||+.+|++||++.|+++.
T Consensus       220 ~~-----~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         220 PI-----SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             CC-----CCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            01     11145578999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.91  E-value=1.7e-24  Score=173.70  Aligned_cols=148  Identities=24%  Similarity=0.233  Sum_probs=111.6

Q ss_pred             eeeeecc----cccccc-cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAAN-IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|+++. ......+++.++..++.|++.||+|||+.+   ++|+||||+||+++.              
T Consensus        75 ~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~  151 (285)
T cd05630          75 LCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVH  151 (285)
T ss_pred             EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceee
Confidence            5799999    666653 233346899999999999999999999998   999999999999874              


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++||||||+++|++++|..||.........  .........  .    ...
T Consensus       152 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~--~~~~~~~~~--~----~~~  223 (285)
T cd05630         152 VPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR--EEVERLVKE--V----QEE  223 (285)
T ss_pred             cCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH--HHHHhhhhh--h----hhh
Confidence                          289999999889999999999999999999999998653321110  000000000  0    000


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPT-----MSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~  166 (216)
                           .+......+.+++..||+.+|++||+     +.|+++
T Consensus       224 -----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         224 -----YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             -----cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence                 11114456889999999999999999     778775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.91  E-value=1.1e-24  Score=175.47  Aligned_cols=146  Identities=21%  Similarity=0.302  Sum_probs=111.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++..  .+.+++.++..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        94 ~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~  168 (292)
T cd06658          94 LWVVMEFLEGGALTDIVT--HTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQV  168 (292)
T ss_pred             EEEEEeCCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence            5899999    5655532  345899999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++||||||++++|+++|..||.......  ....         +.....+.
T Consensus       169 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~---------~~~~~~~~  237 (292)
T cd06658         169 SKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ--AMRR---------IRDNLPPR  237 (292)
T ss_pred             ccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH---------HHhcCCCc
Confidence                          2999999988889999999999999999999999986432111  0000         00011111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ...   .......+.+++.+||+.+|++||++.++++.
T Consensus       238 ~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         238 VKD---SHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             ccc---ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            111   11134568899999999999999999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.91  E-value=2.4e-24  Score=172.17  Aligned_cols=160  Identities=19%  Similarity=0.251  Sum_probs=111.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +++.+ ......+++.+++.++.|++.||+|||+.+   ++|+||||+||+++.               
T Consensus        75 ~~~v~e~~~~~~l~~~-~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  150 (286)
T cd07847          75 LHLVFEYCDHTVLNEL-EKNPRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARIL  150 (286)
T ss_pred             EEEEEeccCccHHHHH-HhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceec
Confidence            5799999    44444 233446899999999999999999999988   999999999999974               


Q ss_pred             --------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchh--hhh-------hhhhcc
Q 040682           64 --------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLL--GHA-------WDLWKD  119 (216)
Q Consensus        64 --------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~--~~~-------~~~~~~  119 (216)
                                    .|++||.+.+ ..++.++||||||+++|++++|..||...........  ...       ...+..
T Consensus       151 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07847         151 TGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFST  230 (286)
T ss_pred             CCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccc
Confidence                          2899999876 4578899999999999999999999875443211000  000       000000


Q ss_pred             Ccc-ccccccccccc----hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          120 DRV-HELIDPVITQD----EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       120 ~~~-~~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ... .....+.....    .........+.+++.+||+.+|++||++.|++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         231 NQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             ccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            000 00000110000    000113567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.91  E-value=1.6e-24  Score=173.30  Aligned_cols=147  Identities=21%  Similarity=0.252  Sum_probs=111.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|..+. ...+.+++.++..++.|++.||+|||+.+   ++|+||||+||+++.               
T Consensus        72 ~~lv~e~~~~~~L~~~i-~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~  147 (279)
T cd05633          72 LCFILDLMNGGDLHYHL-SQHGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF  147 (279)
T ss_pred             EEEEEecCCCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence            5799999    555553 33456999999999999999999999998   999999999999964               


Q ss_pred             ------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 ------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 ------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                  .|+|||.+.+ ..++.++|||||||+++++++|..||..............   .    .  .....+
T Consensus       148 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~---~----~--~~~~~~  218 (279)
T cd05633         148 SKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---T----L--TVNVEL  218 (279)
T ss_pred             cccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH---h----h--cCCcCC
Confidence                        2899998864 5688999999999999999999999865433221111000   0    0  001111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                           +...+.++.+++.+||+.+|++||     +++|++++
T Consensus       219 -----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         219 -----PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             -----ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence                 112456789999999999999999     58888775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.91  E-value=3.8e-24  Score=170.71  Aligned_cols=145  Identities=21%  Similarity=0.311  Sum_probs=112.8

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      ..|+||||    +|.++..  ...+++.++..++.|++.||+|||+.+   ++|+|++|+||+++.+             
T Consensus        76 ~~~lv~e~~~~~~L~~~i~--~~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~  150 (277)
T cd06640          76 KLWIIMEYLGGGSALDLLR--AGPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQ  150 (277)
T ss_pred             EEEEEEecCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEccccccee
Confidence            36899999    5655533  346899999999999999999999998   9999999999999751             


Q ss_pred             ----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           65 ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        65 ----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                      |.+||.+.+..++.++|+||||+++||+++|..|+.........     . .....        
T Consensus       151 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-----~-~~~~~--------  216 (277)
T cd06640         151 LTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL-----F-LIPKN--------  216 (277)
T ss_pred             ccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh-----h-hhhcC--------
Confidence                            89999998888999999999999999999999997543221100     0 00000        


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       . ........+..+.+++.+||+.+|++||++.++++.
T Consensus       217 -~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         217 -N-PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             -C-CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence             0 011122256678999999999999999999999765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.91  E-value=4.6e-24  Score=172.95  Aligned_cols=160  Identities=21%  Similarity=0.366  Sum_probs=111.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++.. ..+.+++..+..++.|++.||.|||+ .+   ++|+||||.||+++.              
T Consensus        74 ~~lv~ey~~~~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~  149 (308)
T cd06615          74 ISICMEHMDGGSLDQVLK-KAGRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQ  149 (308)
T ss_pred             EEEEeeccCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccc
Confidence            5799999    6666633 33568999999999999999999997 46   999999999999964              


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccch-hhhhhhhhccCcc------c
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNL-LGHAWDLWKDDRV------H  123 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~  123 (216)
                                   .|++||.+.+..++.++|+||||+++|++++|..||.......... .............      .
T Consensus       150 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (308)
T cd06615         150 LIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGH  229 (308)
T ss_pred             ccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCC
Confidence                         2899999988889999999999999999999999986443211100 0000000000000      0


Q ss_pred             -----------c----ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          124 -----------E----LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       124 -----------~----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                                 +    ......+ ..........+.+++.+||+.+|++||++.+|++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         230 PPDSPRPMAIFELLDYIVNEPPP-KLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             CCCccchhhHHHHHHHHhcCCCc-cCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                       0    0000000 00000134568999999999999999999999865

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.91  E-value=2e-24  Score=171.68  Aligned_cols=150  Identities=22%  Similarity=0.288  Sum_probs=111.9

Q ss_pred             eeeeecc----cccccc-----cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------
Q 040682            3 KKLVYSK----LLDAAN-----IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~-----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------   64 (216)
                      .++++||    +|.++.     ......+++.++..++.|++.||+|||+.+   ++|+||||+||+++.+         
T Consensus        82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg  158 (273)
T cd05074          82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADFG  158 (273)
T ss_pred             eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECccc
Confidence            4678888    444331     122235789999999999999999999998   9999999999999752         


Q ss_pred             ----------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           65 ----------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        65 ----------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                            |++||.+.+..++.++||||||+++|++++ |..||......  .....    .....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~~----~~~~~  232 (273)
T cd05074         159 LSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYNY----LIKGN  232 (273)
T ss_pred             ccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHHH----HHcCC
Confidence                                  778998888888999999999999999999 77776533211  11111    11110


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .     ...     +......+.+++.+||+.+|++||++.++++.|+++
T Consensus       233 ~-----~~~-----~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         233 R-----LKQ-----PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             c-----CCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            0     000     011445799999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.91  E-value=1.5e-24  Score=171.76  Aligned_cols=144  Identities=24%  Similarity=0.373  Sum_probs=111.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.. ..+.+++.++..++.|++.||+|||+.+   ++|+||+|+||+++.               
T Consensus        81 ~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~~  156 (267)
T cd06628          81 LNIFLEYVPGGSVAALLN-NYGAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKKL  156 (267)
T ss_pred             cEEEEEecCCCCHHHHHH-hccCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCccc
Confidence            5799999    5666633 3356899999999999999999999998   999999999999864               


Q ss_pred             --------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 --------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 --------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                          .|++||.+.+..++.++|+|+||+++|++++|..||.......     ....      ..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~------~~  225 (267)
T cd06628         157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-----AIFK------IG  225 (267)
T ss_pred             ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-----HHHH------Hh
Confidence                                1789999988888999999999999999999999986432211     0000      00


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ....+..+     ......+.+++.+||+.+|++||++.++++
T Consensus       226 ~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         226 ENASPEIP-----SNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             ccCCCcCC-----cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            01111111     124567899999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.91  E-value=5.7e-24  Score=170.71  Aligned_cols=161  Identities=20%  Similarity=0.258  Sum_probs=111.8

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      ..++||||   +|.++.......+++.+++.++.|+++||.|||+.+   ++|+||||+||+++.               
T Consensus        77 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  153 (291)
T cd07844          77 TLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAK  153 (291)
T ss_pred             eEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECcccccccc
Confidence            36899999   566654454557899999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc---Ccc---
Q 040682           64 --------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD---DRV---  122 (216)
Q Consensus        64 --------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~---  122 (216)
                                    .|+|||++.+. .++.++||||+|+++|+|++|..||....... ......+.....   ...   
T Consensus       154 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  232 (291)
T cd07844         154 SVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE-DQLHKIFRVLGTPTEETWPGV  232 (291)
T ss_pred             CCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH-HHHHHHHHhcCCCChhhhhhh
Confidence                          18899988764 58899999999999999999999986443211 111111110000   000   


Q ss_pred             ------ccccccccccch-----hhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          123 ------HELIDPVITQDE-----ISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       123 ------~~~~~~~~~~~~-----~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                            ............     ........+.+++.+|++.+|.+||++.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         233 SSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             hhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                  000000000000     00001256789999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.91  E-value=7.3e-25  Score=182.26  Aligned_cols=144  Identities=26%  Similarity=0.341  Sum_probs=115.5

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      -|+|.||   .|..+ ....+.++++++..++.++..||.|||+.+   |+|||+||.|||+..+               
T Consensus        76 ~~vVte~a~g~L~~i-l~~d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~  151 (808)
T KOG0597|consen   76 LWVVTEYAVGDLFTI-LEQDGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMS  151 (808)
T ss_pred             EEEEehhhhhhHHHH-HHhccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcc
Confidence            4899999   44444 556677999999999999999999999998   9999999999999873               


Q ss_pred             --------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           65 --------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        65 --------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                    |+|||+..+.+|+..+|+||+||++||+.+|++||......     +.+...        .-++..
T Consensus       152 ~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~-----~Lv~~I--------~~d~v~  218 (808)
T KOG0597|consen  152 TNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSIT-----QLVKSI--------LKDPVK  218 (808)
T ss_pred             cCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHH-----HHHHHH--------hcCCCC
Confidence                          99999999999999999999999999999999998521111     111000        012222


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                          ++...+..+..++..-+.+||.+|.+..+++.+
T Consensus       219 ----~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  219 ----PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             ----CcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence                222367789999999999999999999998854

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=3.6e-25  Score=185.99  Aligned_cols=149  Identities=23%  Similarity=0.309  Sum_probs=119.4

Q ss_pred             eeeeecc----ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      +|+|.||    +|-++ ....+.-++.-..+.++.||+.|+.||..++   .||||+..+|+|+..+             
T Consensus       338 FYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRl  414 (1157)
T KOG4278|consen  338 FYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRL  414 (1157)
T ss_pred             eEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhh
Confidence            6899999    44444 5555666888888999999999999999998   9999999999999763             


Q ss_pred             -----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 -----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 -----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       |.|||.+..+.++.++|||+||+++||+.| |..|+.+-+..      .++.+++.+      
T Consensus       415 MtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS------qVY~LLEkg------  482 (1157)
T KOG4278|consen  415 MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------QVYGLLEKG------  482 (1157)
T ss_pred             hcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH------HHHHHHhcc------
Confidence                             999999999999999999999999999998 77776543322      223333222      


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                         .... .+..|++.+++||+.||++.|.+||++.|+.+.++.
T Consensus       483 ---yRM~-~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEt  522 (1157)
T KOG4278|consen  483 ---YRMD-GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFET  522 (1157)
T ss_pred             ---cccc-CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHH
Confidence               1111 122278899999999999999999999999998875

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.91  E-value=1.4e-24  Score=174.20  Aligned_cols=150  Identities=25%  Similarity=0.347  Sum_probs=113.2

Q ss_pred             eeeeecc----cccccccCC---------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------
Q 040682            3 KKLVYSK----LLDAANIDK---------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------   63 (216)
                      .++||||    +|.++....         ...+++..+..++.|++.||+|||+++   ++||||||+||+++.      
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence            5899999    666663221         233567788999999999999999998   999999999999875      


Q ss_pred             -------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhh
Q 040682           64 -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLW  117 (216)
Q Consensus        64 -------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~  117 (216)
                                               .|++||.+.+..++.++|||||||++||+++ |..||.......  ..    ...
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~--~~----~~~  234 (288)
T cd05061         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ--VL----KFV  234 (288)
T ss_pred             CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HH----HHH
Confidence                                     1899999988889999999999999999998 677774322111  10    100


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .....     ...     +..+...+.+++.+||+.+|++||++.++++.|++.
T Consensus       235 ~~~~~-----~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         235 MDGGY-----LDQ-----PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             HcCCC-----CCC-----CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence            00000     000     111346799999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.91  E-value=7.8e-25  Score=178.69  Aligned_cols=138  Identities=23%  Similarity=0.284  Sum_probs=106.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+ ......+++.++..++.|++.||+|||+++   ++||||||+|||++.               
T Consensus        76 ~~lv~Ey~~~g~L~~~-i~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~  151 (323)
T cd05615          76 LYFVMEYVNGGDLMYH-IQQVGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEH  151 (323)
T ss_pred             EEEEEcCCCCCcHHHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEecccccccc
Confidence            5899999    44444 233456999999999999999999999998   999999999999875               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|+|++|..||.......  ....    .....      ..
T Consensus       152 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~--~~~~----i~~~~------~~  219 (323)
T cd05615         152 MVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE--LFQS----IMEHN------VS  219 (323)
T ss_pred             CCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH--HHHH----HHhCC------CC
Confidence                          2999999998899999999999999999999999986433211  1111    10000      00


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTM  161 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  161 (216)
                      .     +...+..+.+++.+||+.+|.+|++.
T Consensus       220 ~-----p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         220 Y-----PKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             C-----CccCCHHHHHHHHHHcccCHhhCCCC
Confidence            1     11144568899999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.7e-24  Score=175.46  Aligned_cols=169  Identities=22%  Similarity=0.190  Sum_probs=129.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc-----CCCCCeecCCCCCCceeecCC---------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ-----YSRLRIIHRDLKASNILLDSG---------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-----~~~~~iiH~dik~~nil~~~~---------   64 (216)
                      -|||.+|    +|.|++.+  ..++....++++..++.||++||.     +|.+.|.|||||+.|||+..+         
T Consensus       284 LwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG  361 (513)
T KOG2052|consen  284 LWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  361 (513)
T ss_pred             EEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence            4899999    88888544  679999999999999999999994     678999999999999999762         


Q ss_pred             ------------------------CCChhhhhcCC------CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhh
Q 040682           65 ------------------------YMPPEYALRGF------FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAW  114 (216)
Q Consensus        65 ------------------------y~aPE~~~~~~------~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~  114 (216)
                                              |||||++...-      --..+||||||.++||+..+...-.........+..++-
T Consensus       362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp  441 (513)
T KOG2052|consen  362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP  441 (513)
T ss_pred             eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC
Confidence                                    99999997541      236889999999999998754432222233323333332


Q ss_pred             hhhccCcc-----ccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          115 DLWKDDRV-----HELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       115 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                      .....+++     .+.++|.++....+.+....+.++|..||..+|..|.++-.+.+.|.++..
T Consensus       442 ~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  442 SDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             CCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            22222222     234467776666666789999999999999999999999999999888643

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.91  E-value=2.1e-24  Score=175.63  Aligned_cols=151  Identities=30%  Similarity=0.386  Sum_probs=113.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   ++.+........+++.++..++.+++.||.|||+.+   ++|+|++|+||+++.                
T Consensus       100 ~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~  176 (317)
T cd06635         100 AWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIAS  176 (317)
T ss_pred             EEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccC
Confidence            5899999   555554444567999999999999999999999998   999999999999975                


Q ss_pred             ---------CCCChhhhh---cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccc
Q 040682           64 ---------GYMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVIT  131 (216)
Q Consensus        64 ---------~y~aPE~~~---~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (216)
                               .|++||.+.   +..++.++||||||+++|+|++|..||........  .   .......      .+...
T Consensus       177 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~---~~~~~~~------~~~~~  245 (317)
T cd06635         177 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--L---YHIAQNE------SPTLQ  245 (317)
T ss_pred             CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH--H---HHHHhcc------CCCCC
Confidence                     289999874   34688999999999999999999999754321110  0   0000000      01111


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                          .......+.+++.+||+.+|.+||++.++++.+-..
T Consensus       246 ----~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~  281 (317)
T cd06635         246 ----SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL  281 (317)
T ss_pred             ----CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence                111455689999999999999999999999866543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.91  E-value=4.8e-25  Score=169.29  Aligned_cols=144  Identities=23%  Similarity=0.368  Sum_probs=111.2

Q ss_pred             cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------------------
Q 040682           10 LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------------------   64 (216)
Q Consensus        10 ~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------------------   64 (216)
                      .++.++.+-++++++..+-++...+..||.||..+.  .|||||+||+|||++..                         
T Consensus       176 C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAG  253 (391)
T KOG0983|consen  176 CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAG  253 (391)
T ss_pred             HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecccccccccC
Confidence            566677777788999999999999999999999865  69999999999999872                         


Q ss_pred             ---CCChhhhhcC---CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHH
Q 040682           65 ---YMPPEYALRG---FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLS  138 (216)
Q Consensus        65 ---y~aPE~~~~~---~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (216)
                         |+|||.+.-.   .|+.++||||||++++||.||+.|+.+.+.. ....            ..+++...+.......
T Consensus       254 C~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-Fe~l------------tkvln~ePP~L~~~~g  320 (391)
T KOG0983|consen  254 CAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-FEVL------------TKVLNEEPPLLPGHMG  320 (391)
T ss_pred             CccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-HHHH------------HHHHhcCCCCCCcccC
Confidence               9999988643   6899999999999999999999998754322 1111            1111111111111122


Q ss_pred             HHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          139 MLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       139 ~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                      .+..+.+|+..||..|+.+||...+++++=
T Consensus       321 FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~  350 (391)
T KOG0983|consen  321 FSPDFQSFVKDCLTKDHRKRPKYNKLLEHP  350 (391)
T ss_pred             cCHHHHHHHHHHhhcCcccCcchHHHhcCc
Confidence            677899999999999999999999988653

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.91  E-value=2e-24  Score=173.07  Aligned_cols=148  Identities=22%  Similarity=0.300  Sum_probs=113.6

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ..|+|+||    +|.++.......+++.++..++.|++.||+|||+.+   ++|+|++|+||+++.              
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~  165 (286)
T cd06614          89 ELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQ  165 (286)
T ss_pred             EEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhh
Confidence            36899999    777774444457999999999999999999999988   999999999999874              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|++||.+.+..++.++|+||||+++|++++|..|+........     ... ......     +
T Consensus       166 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~-----~~~-~~~~~~-----~  234 (286)
T cd06614         166 LTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA-----LFL-ITTKGI-----P  234 (286)
T ss_pred             hccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH-----HHH-HHhcCC-----C
Confidence                           28999999888899999999999999999999999753221110     000 000000     0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ..   .........+.+++.+||+.+|.+||++.++++
T Consensus       235 ~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         235 PL---KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             CC---cchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            00   111114457889999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.91  E-value=1.1e-24  Score=179.83  Aligned_cols=145  Identities=18%  Similarity=0.206  Sum_probs=113.6

Q ss_pred             eeeeecc-ccccc--ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK-LLDAA--NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey-~l~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      -|||||| ...|.  +....+.|++..+..++.+++-||.-+|..|   +|||||||.|+|++.                
T Consensus       216 LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~  292 (550)
T KOG0605|consen  216 LYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD  292 (550)
T ss_pred             eEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhh
Confidence            4899999 44444  4566678999999999999999999999999   999999999999986                


Q ss_pred             ------------------------------------------------------------CCCChhhhhcCCCCcchhhh
Q 040682           64 ------------------------------------------------------------GYMPPEYALRGFFSIKSDVF   83 (216)
Q Consensus        64 ------------------------------------------------------------~y~aPE~~~~~~~~~~~Dv~   83 (216)
                                                                                  +|+|||++.+..|...+|.|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW  372 (550)
T KOG0605|consen  293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW  372 (550)
T ss_pred             hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence                                                                        29999999999999999999


Q ss_pred             hHHHHHHHHHhCCCCCCcCCCCcc--chhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCC-
Q 040682           84 SFGVLMLEILSGKKSTAVYNTGSF--NLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPT-  160 (216)
Q Consensus        84 s~G~~l~ell~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-  160 (216)
                      |+|||+||||.|.+||......+.  ....|...              +.. +...+...+..+|+.+|+. ||++|.- 
T Consensus       373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~--------------l~f-P~~~~~s~eA~DLI~rll~-d~~~RLG~  436 (550)
T KOG0605|consen  373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET--------------LKF-PEEVDLSDEAKDLITRLLC-DPENRLGS  436 (550)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh--------------ccC-CCcCcccHHHHHHHHHHhc-CHHHhcCc
Confidence            999999999999999976554433  22222100              000 0111144678999999999 9999975 


Q ss_pred             --HHHHHH
Q 040682          161 --MSDVVS  166 (216)
Q Consensus       161 --~~evl~  166 (216)
                        +.||.+
T Consensus       437 ~G~~EIK~  444 (550)
T KOG0605|consen  437 KGAEEIKK  444 (550)
T ss_pred             ccHHHHhc
Confidence              555543

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.91  E-value=2.1e-24  Score=167.46  Aligned_cols=153  Identities=21%  Similarity=0.256  Sum_probs=119.5

Q ss_pred             ceeeeecc-----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC------------
Q 040682            2 CKKLVYSK-----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------   64 (216)
Q Consensus         2 ~~~lV~Ey-----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~------------   64 (216)
                      |-.+|||.     .+..+..++...+++.++-.|++||+.|++|||+.+   |.|||+||+|+|.+..            
T Consensus       133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfG  209 (400)
T KOG0604|consen  133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFG  209 (400)
T ss_pred             eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccc
Confidence            56899999     455555566667999999999999999999999999   9999999999999752            


Q ss_pred             -------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           65 -------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        65 -------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                         |.|||++-...|+..+|+||+|+++|-|++|.+||.....-..      .+..+.+.... 
T Consensus       210 FAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai------spgMk~rI~~g-  282 (400)
T KOG0604|consen  210 FAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------SPGMKRRIRTG-  282 (400)
T ss_pred             cccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC------ChhHHhHhhcc-
Confidence                               9999999999999999999999999999999999965443211      01111110000 


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       .-..+..+++. .++...+++...|..+|.+|.++.++..
T Consensus       283 -qy~FP~pEWs~-VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  283 -QYEFPEPEWSC-VSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             -CccCCChhHhH-HHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence             01123345554 7888899999999999999999998875

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.91  E-value=3.6e-24  Score=171.08  Aligned_cols=148  Identities=26%  Similarity=0.425  Sum_probs=109.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|+.+     ..+++..+..++.|++.||+|||+.+   ++|+||||+||+++.               
T Consensus        74 ~~lv~e~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~  145 (279)
T cd06619          74 ISICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQL  145 (279)
T ss_pred             EEEEEecCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceec
Confidence            5789999    33322     34788899999999999999999998   999999999999975               


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccch-hhhhhhhhccCcccccccccc
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNL-LGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                  .|+|||.+.+..++.++|+||||+++|++++|..||.......... ............     .+..
T Consensus       146 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  220 (279)
T cd06619         146 VNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVL  220 (279)
T ss_pred             ccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCC
Confidence                        2899999998889999999999999999999999986543222110 000000000000     0111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ...    ....++.+++.+||+.+|++||++.+++++
T Consensus       221 ~~~----~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         221 PVG----QFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             CCC----cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            111    134568899999999999999999998865

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.91  E-value=2.1e-24  Score=174.14  Aligned_cols=147  Identities=20%  Similarity=0.307  Sum_probs=112.0

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ..|+||||    +|..+.  ....+++.+++.++.|++.||+|||+.+   ++|+||||+||+++.              
T Consensus        92 ~~~iv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~  166 (297)
T cd06659          92 ELWVLMEFLQGGALTDIV--SQTRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQ  166 (297)
T ss_pred             eEEEEEecCCCCCHHHHH--hhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhh
Confidence            36899999    555543  2346899999999999999999999998   999999999999974              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||.+.+..++.++||||||++++||++|..||.......  ....    .....     .+
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~----~~~~~-----~~  235 (297)
T cd06659         167 ISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKR----LRDSP-----PP  235 (297)
T ss_pred             cccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH----HhccC-----CC
Confidence                           2899999998889999999999999999999999986432211  0000    10000     00


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..   .........+.+++.+||+.+|++||++.++++.
T Consensus       236 ~~---~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         236 KL---KNAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             Cc---cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            00   0011134568899999999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.91  E-value=1.5e-24  Score=173.60  Aligned_cols=158  Identities=22%  Similarity=0.261  Sum_probs=112.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    ++..+ ......+++.++..++.|++.||+|||+.+   ++|+|++|+||+++.               
T Consensus        75 ~~iv~e~~~~~~l~~~-~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~  150 (288)
T cd07833          75 LYLVFEYVERTLLELL-EASPGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARAL  150 (288)
T ss_pred             EEEEEecCCCCHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeeccccc
Confidence            5899999    33333 344456899999999999999999999998   999999999999864               


Q ss_pred             ---------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh-----------h
Q 040682           64 ---------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD-----------L  116 (216)
Q Consensus        64 ---------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~-----------~  116 (216)
                                     .|++||++.+. .++.++||||||+++|++++|..||........  ......           .
T Consensus       151 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  228 (288)
T cd07833         151 RARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ--LYLIQKCLGPLPPSHQEL  228 (288)
T ss_pred             CCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHhhh
Confidence                           18999999888 889999999999999999999998865432211  000000           0


Q ss_pred             hc-cC-----ccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          117 WK-DD-----RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       117 ~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .. ..     .......+.......+...+.++.+++.+||+.+|++||++.++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         229 FSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             cccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            00 00     0000000000000111123678999999999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.2e-24  Score=171.63  Aligned_cols=145  Identities=23%  Similarity=0.353  Sum_probs=111.9

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ..|+|+||    +|.++...  ..+++.++..++.|++.||.|||+++   ++|+|++|+||+++.              
T Consensus        73 ~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~  147 (274)
T cd06609          73 KLWIIMEYCGGGSCLDLLKP--GKLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQ  147 (274)
T ss_pred             eEEEEEEeeCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccccccee
Confidence            36899999    56666332  27899999999999999999999998   999999999999975              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|++||.+.+..++.++||||||+++|++++|..||........     .. .....     ..+
T Consensus       148 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~-----~~-~~~~~-----~~~  216 (274)
T cd06609         148 LTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV-----LF-LIPKN-----NPP  216 (274)
T ss_pred             ecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH-----HH-Hhhhc-----CCC
Confidence                           18999999988899999999999999999999999854331110     00 00000     111


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .+...    ..+..+.+++.+||..+|++||++.++++
T Consensus       217 ~~~~~----~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         217 SLEGN----KFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             CCccc----ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            11111    04456889999999999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.91  E-value=5.6e-24  Score=170.49  Aligned_cols=151  Identities=26%  Similarity=0.411  Sum_probs=110.7

Q ss_pred             eeeeecc---ccccc----ccCCCCCCChHHHHHHHHHHHHHHHhhhcC-CCCCeecCCCCCCceeecC-----------
Q 040682            3 KKLVYSK---LLDAA----NIDKKRLLDWQVRARIIEGIAQGLLYLHQY-SRLRIIHRDLKASNILLDS-----------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~~~iiH~dik~~nil~~~-----------   63 (216)
                      .|+||||   ++.++    .......+++..+..++.+++.||+|||+. +   ++||||||+||+++.           
T Consensus        78 ~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~  154 (288)
T cd06616          78 CWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGI  154 (288)
T ss_pred             EEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecch
Confidence            5788999   44443    122346799999999999999999999975 6   999999999999864           


Q ss_pred             -----------------CCCChhhhhcC---CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 -----------------GYMPPEYALRG---FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 -----------------~y~aPE~~~~~---~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                       .|++||.+.+.   .++.++||||||+++|++++|+.||.....    .......... .   
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~-~---  226 (288)
T cd06616         155 SGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFDQLTQVVK-G---  226 (288)
T ss_pred             hHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HHHHHhhhcC-C---
Confidence                             28999998876   688999999999999999999999864321    1111111000 0   


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        ..+.+..... ...+.++.+++.+||+.+|++||++.+|++.
T Consensus       227 --~~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         227 --DPPILSNSEE-REFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             --CCCcCCCcCC-CccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              0111111111 1256679999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=3.1e-24  Score=174.33  Aligned_cols=146  Identities=21%  Similarity=0.198  Sum_probs=111.2

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++... ....+++..+..++.|++.||+|||+.+   ++|+||||+||+++.              
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~  152 (316)
T cd05574          76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQ  152 (316)
T ss_pred             EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhc
Confidence            5899999    66666332 3356899999999999999999999998   999999999999963              


Q ss_pred             --------------------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCC
Q 040682           64 --------------------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST   99 (216)
Q Consensus        64 --------------------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~   99 (216)
                                                                  .|++||++.+..++.++||||||+++|++++|..||
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf  232 (316)
T cd05574         153 SDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPF  232 (316)
T ss_pred             ccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCC
Confidence                                                        289999999888999999999999999999999998


Q ss_pred             CcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCC----HHHHHH
Q 040682          100 AVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPT----MSDVVS  166 (216)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps----~~evl~  166 (216)
                      ........     ...         ............ .....+.+++.+||+.+|++||+    +.|++.
T Consensus       233 ~~~~~~~~-----~~~---------~~~~~~~~~~~~-~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         233 KGSNRDET-----FSN---------ILKKEVTFPGSP-PVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             CCCchHHH-----HHH---------HhcCCccCCCcc-ccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            64432211     000         000000000011 14567999999999999999999    666665

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.91  E-value=8.9e-25  Score=167.85  Aligned_cols=149  Identities=25%  Similarity=0.301  Sum_probs=112.0

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      +-|+|||.    -|-++ ....-.++++...++++|+.+|++|||.++   |+|||+||+|||+++              
T Consensus        97 F~FlVFdl~prGELFDy-Lts~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGFa~~  172 (411)
T KOG0599|consen   97 FVFLVFDLMPRGELFDY-LTSKVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGFACQ  172 (411)
T ss_pred             hhhhhhhhcccchHHHH-hhhheeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEeccceeec
Confidence            34778888    33333 233456899999999999999999999999   999999999999986              


Q ss_pred             --------------CCCChhhhh------cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 --------------GYMPPEYAL------RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 --------------~y~aPE~~~------~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                    +|.|||.+.      ...|+...|+|+.|+++|-++.|.+||-.....-      ....+..++. 
T Consensus       173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml------MLR~ImeGky-  245 (411)
T KOG0599|consen  173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML------MLRMIMEGKY-  245 (411)
T ss_pred             cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH------HHHHHHhccc-
Confidence                          499999875      2368999999999999999999999983211110      0111111111 


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                           .....++.+ .+....+++.+||+.||.+|.|++|++++
T Consensus       246 -----qF~speWad-is~~~KdLIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  246 -----QFRSPEWAD-ISATVKDLISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             -----ccCCcchhh-ccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence                 111234444 77889999999999999999999999854

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.91  E-value=1.6e-24  Score=173.75  Aligned_cols=145  Identities=21%  Similarity=0.282  Sum_probs=111.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++...  ..+++.++..++.|++.||+|||+.+   ++|+||+|+||+++.               
T Consensus        91 ~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~  165 (285)
T cd06648          91 LWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQV  165 (285)
T ss_pred             EEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhh
Confidence            5789999    66666333  46899999999999999999999998   999999999999875               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|++||...+..++.++||||||+++|++++|..||.......     .... ....     ..+.
T Consensus       166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~-----~~~~-~~~~-----~~~~  234 (285)
T cd06648         166 SKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ-----AMKR-IRDN-----LPPK  234 (285)
T ss_pred             ccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH-----HHHH-HHhc-----CCCC
Confidence                          2899999988889999999999999999999999985422110     1000 0000     0011


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ..   ........+.+++.+||+.+|++||++.++++
T Consensus       235 ~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         235 LK---NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             Cc---ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            11   01114457899999999999999999999885

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.91  E-value=2.1e-24  Score=173.48  Aligned_cols=162  Identities=19%  Similarity=0.200  Sum_probs=113.5

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      ..|+||||   +|.++.......+++.+++.++.|++.||+|||+++   ++|+||||+||+++.+              
T Consensus        80 ~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~  156 (293)
T cd07843          80 KIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREY  156 (293)
T ss_pred             cEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeec
Confidence            36899999   666664444457999999999999999999999998   9999999999999751              


Q ss_pred             ---------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc--hh-------hhhhhhhcc
Q 040682           65 ---------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN--LL-------GHAWDLWKD  119 (216)
Q Consensus        65 ---------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~--~~-------~~~~~~~~~  119 (216)
                                     |++||.+.+. .++.++|+||||+++|+|++|..||.........  ..       ...|..+..
T Consensus       157 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (293)
T cd07843         157 GSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE  236 (293)
T ss_pred             cCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhc
Confidence                           8999988765 4688999999999999999999998654322110  00       000111100


Q ss_pred             ------CccccccccccccchhhHH-HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          120 ------DRVHELIDPVITQDEISLS-MLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       120 ------~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                            ..........+. ...+.. ....+.+++.+||+.+|++||++.|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         237 LPGAKKKTFTKYPYNQLR-KKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             cchhcccccccccchhhh-ccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence                  000000000000 001110 25568899999999999999999999753

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.3e-24  Score=178.83  Aligned_cols=147  Identities=21%  Similarity=0.226  Sum_probs=111.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.... +.+++.+++.++.|++.||+|||+.+   ++||||||+||+++.               
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  151 (350)
T cd05573          76 LYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKM  151 (350)
T ss_pred             EEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccC
Confidence            5899999    566653333 67999999999999999999999998   999999999999853               


Q ss_pred             -------------------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCC
Q 040682           64 -------------------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTA  100 (216)
Q Consensus        64 -------------------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~  100 (216)
                                                                 .|+|||.+.+..++.++|||||||++|||++|..||.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~  231 (350)
T cd05573         152 NKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFY  231 (350)
T ss_pred             cccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCC
Confidence                                                       1889999999999999999999999999999999986


Q ss_pred             cCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCC-HHHHHHH
Q 040682          101 VYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPT-MSDVVSM  167 (216)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~evl~~  167 (216)
                      .......     ........   ..+  ..+.  .. ..+..+.+++.+|+. +|.+||+ +.+++++
T Consensus       232 ~~~~~~~-----~~~i~~~~---~~~--~~p~--~~-~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         232 SDTLQET-----YNKIINWK---ESL--RFPP--DP-PVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             CCCHHHH-----HHHHhccC---Ccc--cCCC--CC-CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            5442111     00000000   000  0000  00 035678899999997 9999999 9999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.91  E-value=2.9e-24  Score=172.23  Aligned_cols=148  Identities=21%  Similarity=0.204  Sum_probs=110.2

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|+++.. .....+++.++..++.|++.||.|||+.+   |+||||||+||+++.              
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~  151 (285)
T cd05632          75 LCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVK  151 (285)
T ss_pred             EEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCccee
Confidence            4789999    5655532 33446999999999999999999999998   999999999999864              


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++|+||||+++|++++|..||........  ...........      ...
T Consensus       152 ~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~--~~~~~~~~~~~------~~~  223 (285)
T cd05632         152 IPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK--REEVDRRVLET------EEV  223 (285)
T ss_pred             cCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhhhcc------ccc
Confidence                          28999999888999999999999999999999999864332111  00000000000      000


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPT-----MSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~  166 (216)
                           ........+.+++..||+.+|++||+     +.+++.
T Consensus       224 -----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         224 -----YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             -----cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence                 11114456789999999999999999     556664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.91  E-value=3.2e-24  Score=173.06  Aligned_cols=145  Identities=23%  Similarity=0.327  Sum_probs=111.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.  ....+++.++..++.|++.||.|||+.+   ++|+||||+||+++.               
T Consensus        91 ~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~  165 (297)
T cd06656          91 LWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI  165 (297)
T ss_pred             EEEeecccCCCCHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEc
Confidence            6899999    565553  2345899999999999999999999998   999999999999964               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|++||.+.+..++.++|+||||+++|++++|..||...........     .....      .+.
T Consensus       166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-----~~~~~------~~~  234 (297)
T cd06656         166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-----IATNG------TPE  234 (297)
T ss_pred             cCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-----eccCC------CCC
Confidence                          28899999888899999999999999999999999854332111000     00000      011


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .   ..+......+.+++.+||+.+|++||++.++++
T Consensus       235 ~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         235 L---QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             C---CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0   111224456789999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.91  E-value=5e-24  Score=175.89  Aligned_cols=159  Identities=21%  Similarity=0.192  Sum_probs=111.4

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   +|......   .++..++..++.|++.||+|||+++   ++|+||||+||+++.                
T Consensus        96 ~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  169 (353)
T cd07850          96 VYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG  169 (353)
T ss_pred             EEEEEeccCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence            4899999   44444222   2899999999999999999999998   999999999999975                


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc--ch-------hhhhhh-------
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF--NL-------LGHAWD-------  115 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~--~~-------~~~~~~-------  115 (216)
                                  .|+|||.+.+..++.++|||||||++|+|++|+.||...+....  ..       ......       
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (353)
T cd07850         170 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR  249 (353)
T ss_pred             CCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence                        28999999999999999999999999999999999865432110  00       000000       


Q ss_pred             -hhccC------cccccccccccc---chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          116 -LWKDD------RVHELIDPVITQ---DEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       116 -~~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       .....      .+...+......   ..........+.+++.+||+.||++||++.|+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence             00000      000000000000   00011245678899999999999999999999853

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.91  E-value=2e-24  Score=174.84  Aligned_cols=147  Identities=30%  Similarity=0.370  Sum_probs=111.2

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   .+.++.......+++.++..++.|++.||.|||+.+   ++|+||+|+||+++.                
T Consensus        90 ~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~  166 (307)
T cd06607          90 AWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVS  166 (307)
T ss_pred             EEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecC
Confidence            5799999   554554444557999999999999999999999998   999999999999975                


Q ss_pred             ---------CCCChhhhh---cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccc
Q 040682           64 ---------GYMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVIT  131 (216)
Q Consensus        64 ---------~y~aPE~~~---~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (216)
                               .|++||++.   ...++.++||||||+++||+++|..|+........     ..... ..     ..+...
T Consensus       167 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~-----~~~~~-~~-----~~~~~~  235 (307)
T cd06607         167 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----LYHIA-QN-----DSPTLS  235 (307)
T ss_pred             CCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH-----HHHHh-cC-----CCCCCC
Confidence                     289999874   34688899999999999999999999753321110     00000 00     001111


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                          ...+...+.+++.+||+.+|++||++.+|+.+
T Consensus       236 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         236 ----SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             ----chhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence                11255678999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.91  E-value=2.5e-24  Score=173.94  Aligned_cols=162  Identities=19%  Similarity=0.213  Sum_probs=110.3

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   ++.++.......+++.+++.++.|++.||+|||+++   ++|+||||+||+++.                
T Consensus        94 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  170 (310)
T cd07865          94 FYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLARAFS  170 (310)
T ss_pred             EEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence            4899999   555554444446899999999999999999999998   999999999999874                


Q ss_pred             -----------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhhh--------hh
Q 040682           64 -----------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHAW--------DL  116 (216)
Q Consensus        64 -----------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~~--------~~  116 (216)
                                       .|+|||.+.+. .++.++||||||+++|+|++|..||........ .......        +.
T Consensus       171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (310)
T cd07865         171 LSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPG  250 (310)
T ss_pred             CCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence                             18999988765 478899999999999999999998865432111 0000000        00


Q ss_pred             hccCcccccc-ccccccchhh-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          117 WKDDRVHELI-DPVITQDEIS-----LSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       117 ~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .......... .+........     ......+.+++.+||+.+|++||++.|++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         251 VDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             ccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            0000000000 0000000000     0013456799999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.91  E-value=1e-23  Score=168.46  Aligned_cols=160  Identities=18%  Similarity=0.211  Sum_probs=113.5

Q ss_pred             ceeeeecc---ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            2 CKKLVYSK---LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      ..++||||   +|.++.. .....+++.++..++.|++.||+|||+.+   ++|+|++|+||+++.+             
T Consensus        80 ~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~  156 (287)
T cd07838          80 KLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARI  156 (287)
T ss_pred             eeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCccee
Confidence            36899999   4555422 23346899999999999999999999998   9999999999998751             


Q ss_pred             ---------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccC-c--c----
Q 040682           65 ---------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDD-R--V----  122 (216)
Q Consensus        65 ---------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~-~--~----  122 (216)
                                     |++||.+.+..++.++|+|||||++|+|++|.+||........  ........... .  .    
T Consensus       157 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  234 (287)
T cd07838         157 YSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ--LDKIFDVIGLPSEEEWPRNV  234 (287)
T ss_pred             ccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHH--HHHHHHHcCCCChHhcCCCc
Confidence                           8999999988899999999999999999999988865432211  11111100000 0  0    


Q ss_pred             ---cccccccc--ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          123 ---HELIDPVI--TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       123 ---~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                         ...+....  .......+....+.+++.+||+.+|++||++.+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         235 SLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             ccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence               00000000  001111224577889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.91  E-value=3.6e-25  Score=180.75  Aligned_cols=140  Identities=22%  Similarity=0.252  Sum_probs=107.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+ ....+.+++.++..++.|++.||+|||+.+   ++||||||+|||++.               
T Consensus        71 ~~lv~e~~~~~~L~~~-l~~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~  146 (325)
T cd05604          71 LYFVLDFVNGGELFFH-LQRERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (325)
T ss_pred             EEEEEcCCCCCCHHHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence            6899999    44444 234457899999999999999999999998   999999999999965               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|+|++|..||.......     . ........      ..
T Consensus       147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~-----~-~~~~~~~~------~~  214 (325)
T cd05604         147 IAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE-----M-YDNILHKP------LV  214 (325)
T ss_pred             CCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH-----H-HHHHHcCC------cc
Confidence                          2999999999999999999999999999999999986432111     0 11111110      00


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSD  163 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~e  163 (216)
                      ...     .....+.+++.+|++.+|.+||++.+
T Consensus       215 ~~~-----~~~~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         215 LRP-----GASLTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             CCC-----CCCHHHHHHHHHHhccCHHhcCCCCC
Confidence            111     13456789999999999999998863

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.91  E-value=2.9e-24  Score=174.06  Aligned_cols=160  Identities=21%  Similarity=0.207  Sum_probs=112.9

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|.++.......+++.++..++.|++.||+|||+.+   ++|+||||+||+++.                
T Consensus        83 ~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845          83 IFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             EEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            5899999   555554444567999999999999999999999998   999999999999975                


Q ss_pred             -------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh-----------hhc
Q 040682           64 -------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD-----------LWK  118 (216)
Q Consensus        64 -------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~-----------~~~  118 (216)
                                   .|+|||.+.+. .++.++||||+|+++|++++|..||........  ......           ...
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  237 (309)
T cd07845         160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQ--LDLIIQLLGTPNESIWPGFS  237 (309)
T ss_pred             CccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCChhhchhhh
Confidence                         18999998764 578999999999999999999999864432211  111000           000


Q ss_pred             cCccccccc-cccccchhh---HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          119 DDRVHELID-PVITQDEIS---LSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       119 ~~~~~~~~~-~~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .......+. +........   ......+.+++.+||+.||++||++.+++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            000000000 000000000   1135667899999999999999999999854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.91  E-value=2.7e-24  Score=170.47  Aligned_cols=149  Identities=20%  Similarity=0.274  Sum_probs=109.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. ...+.+++.++..++.|++.||.|||+.+   ++|+||||+||+++.               
T Consensus        81 ~~lv~e~~~~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd06645          81 LWICMEFCGGGSLQDIY-HVTGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQI  156 (267)
T ss_pred             EEEEEeccCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEc
Confidence            5899999    566653 33456899999999999999999999998   999999999999874               


Q ss_pred             --------------CCCChhhhh---cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 --------------GYMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 --------------~y~aPE~~~---~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                    .|+|||.+.   ...++.++|+|||||++|++++|..|+.........     .... ...    .
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~-----~~~~-~~~----~  226 (267)
T cd06645         157 TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-----FLMT-KSN----F  226 (267)
T ss_pred             cCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH-----Hhhh-ccC----C
Confidence                          289999874   446888999999999999999999997543321110     0000 000    0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .+.....  ....+..+.+++.+||+.+|++||++.+|+++
T Consensus       227 ~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         227 QPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             CCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            0100000  00134568899999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.91  E-value=1.9e-24  Score=171.15  Aligned_cols=146  Identities=21%  Similarity=0.307  Sum_probs=111.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|+++... ...+++..+..++.|++.||+|||+.+   ++|+||+|+||+++.               
T Consensus        77 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          77 ISIFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             EEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            6899999    66666432 346899999999999999999999998   999999999999974               


Q ss_pred             --------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 --------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 --------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                          .|.+||.+.+..++.++||||||++++++++|..||........     .......    
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-----~~~~~~~----  223 (265)
T cd06631         153 AWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-----MFYIGAH----  223 (265)
T ss_pred             hhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-----HHHhhhc----
Confidence                                18899999888899999999999999999999999864321110     0000000    


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ....+..+     ......+.+++.+||+.+|++||++.++++
T Consensus       224 ~~~~~~~~-----~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         224 RGLMPRLP-----DSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             cCCCCCCC-----CCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            00011111     124567899999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.91  E-value=4.2e-24  Score=168.26  Aligned_cols=147  Identities=21%  Similarity=0.320  Sum_probs=112.9

Q ss_pred             eeeeecc----cccccccCC-CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDK-KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++.... ...+++.++..++.|++.||+|||+.+   ++|+|++|+||+++.              
T Consensus        74 ~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~  150 (256)
T cd08221          74 LLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKI  150 (256)
T ss_pred             EEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEE
Confidence            5789999    666653332 456899999999999999999999998   999999999999865              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|.+||.+.+..++.++||||||+++|++++|..||.......     ...... .+...    +
T Consensus       151 ~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-----~~~~~~-~~~~~----~  220 (256)
T cd08221         151 LGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN-----LVVKIV-QGNYT----P  220 (256)
T ss_pred             cccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH-----HHHHHH-cCCCC----C
Confidence                           2889999988888999999999999999999999985422111     111111 11110    0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                            ........+.+++.+||+.+|++||++.++++.+
T Consensus       221 ------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         221 ------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             ------CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence                  0112456789999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.91  E-value=2.6e-24  Score=180.33  Aligned_cols=133  Identities=23%  Similarity=0.392  Sum_probs=103.3

Q ss_pred             CCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CCCChh
Q 040682           21 LLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GYMPPE   69 (216)
Q Consensus        21 ~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y~aPE   69 (216)
                      .+++.+++.++.|++.||+|||+.+   ++||||||+|||++.                               .|++||
T Consensus       235 ~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE  311 (401)
T cd05107         235 ALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPE  311 (401)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChH
Confidence            4788889999999999999999988   999999999999875                               189999


Q ss_pred             hhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHH
Q 040682           70 YALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVAL  148 (216)
Q Consensus        70 ~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  148 (216)
                      .+.+..++.++||||||+++||+++ |..||.......     ........+     ..+..     +..+...+.+++.
T Consensus       312 ~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~-----~~~~~~~~~-----~~~~~-----p~~~~~~l~~li~  376 (401)
T cd05107         312 SIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE-----QFYNAIKRG-----YRMAK-----PAHASDEIYEIMQ  376 (401)
T ss_pred             HhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH-----HHHHHHHcC-----CCCCC-----CCCCCHHHHHHHH
Confidence            9988889999999999999999998 888875332111     001111111     00111     1114567899999


Q ss_pred             hccccCCCCCCCHHHHHHHHccc
Q 040682          149 LCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       149 ~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      +||+.+|.+||++.+|++.|+++
T Consensus       377 ~cl~~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         377 KCWEEKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             HHcCCChhHCcCHHHHHHHHHHH
Confidence            99999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.90  E-value=4.9e-25  Score=175.52  Aligned_cols=160  Identities=17%  Similarity=0.213  Sum_probs=116.1

Q ss_pred             eeecc---ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----------------
Q 040682            5 LVYSK---LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------   63 (216)
Q Consensus         5 lV~Ey---~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----------------   63 (216)
                      +|+|.   ++.+. ..++-.+++..+++.++.|++++++|||+..   ++|.|+||+|||+..                 
T Consensus       168 ivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~~~r  244 (415)
T KOG0671|consen  168 IVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVCFIR  244 (415)
T ss_pred             EEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccceec
Confidence            46666   45555 3445567999999999999999999999998   999999999999864                 


Q ss_pred             -----------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhh
Q 040682           64 -----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHA  113 (216)
Q Consensus        64 -----------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~  113 (216)
                                                   +|+|||++.+..++..+||||+||+|+|+.+|...|...+..+. ...+.+
T Consensus       245 ~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerI  324 (415)
T KOG0671|consen  245 PLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERI  324 (415)
T ss_pred             cCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHh
Confidence                                         29999999999999999999999999999999999877763321 000110


Q ss_pred             hh--------------hhc-----------cCccccccccccccc---hhhHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 040682          114 WD--------------LWK-----------DDRVHELIDPVITQD---EISLSMLMRYVKVALLCVQETVADRPTMSDVV  165 (216)
Q Consensus       114 ~~--------------~~~-----------~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl  165 (216)
                      ..              +..           .++.....++..+..   ........++++|+.++|..||.+|+|+.|++
T Consensus       325 lGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL  404 (415)
T KOG0671|consen  325 LGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREAL  404 (415)
T ss_pred             hCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHh
Confidence            00              000           011112222221111   11222566799999999999999999999987


Q ss_pred             HH
Q 040682          166 SM  167 (216)
Q Consensus       166 ~~  167 (216)
                      .+
T Consensus       405 ~H  406 (415)
T KOG0671|consen  405 SH  406 (415)
T ss_pred             cC
Confidence            53

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=5e-24  Score=170.61  Aligned_cols=154  Identities=27%  Similarity=0.392  Sum_probs=114.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .+|||||    +|+++. ...+.+++..+..++.+++.||.|||+ .+   ++|+|+||+||+++.              
T Consensus        78 ~~lv~e~~~~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~  153 (284)
T cd06620          78 ICMCMEFMDCGSLDRIY-KKGGPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGE  153 (284)
T ss_pred             EEEEEecCCCCCHHHHH-HhccCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccc
Confidence            6899999    666653 334568999999999999999999997 45   999999999999875              


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc------chhhhhhhhhccCcccc
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF------NLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~  124 (216)
                                   .|++||++.+..++.++|||||||++|++++|..||........      ............     
T Consensus       154 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  228 (284)
T cd06620         154 LINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE-----  228 (284)
T ss_pred             hhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc-----
Confidence                         28999999888899999999999999999999999875443211      001111000000     


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                       ..+.+.    ....+..+.+++.+||+.+|++||++.|++++.--
T Consensus       229 -~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~  269 (284)
T cd06620         229 -PPPRLP----SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF  269 (284)
T ss_pred             -cCCCCC----chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence             001111    11145678999999999999999999999986543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.90  E-value=3e-24  Score=169.06  Aligned_cols=146  Identities=20%  Similarity=0.250  Sum_probs=111.5

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.+.... ....+++.++..++.|++.||+|||+++   ++|+|++|+||+++.              
T Consensus        74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~  150 (256)
T cd08218          74 LYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARV  150 (256)
T ss_pred             EEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceee
Confidence            5899999    45554322 3345899999999999999999999998   999999999999975              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|++||.+.+..++.++|+||||++++++++|..|+......     ....... .+..     +
T Consensus       151 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-----~~~~~~~-~~~~-----~  219 (256)
T cd08218         151 LNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK-----NLVLKII-RGSY-----P  219 (256)
T ss_pred             cCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH-----HHHHHHh-cCCC-----C
Confidence                           289999998888999999999999999999999997532211     1111111 0100     1


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .     .+......+.+++.+||+.+|++||++.+|++.
T Consensus       220 ~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         220 P-----VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             C-----CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            0     111245678999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.90  E-value=3.2e-24  Score=172.23  Aligned_cols=161  Identities=23%  Similarity=0.264  Sum_probs=110.6

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      ..|+||||   ++..........+++.++..++.|++.||+|||+.+   ++|+||||+||+++.               
T Consensus        77 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~  153 (291)
T cd07870          77 TLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAK  153 (291)
T ss_pred             eEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEecccccccc
Confidence            36899999   554444444456889999999999999999999998   999999999999864               


Q ss_pred             --------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc---------
Q 040682           64 --------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD---------  119 (216)
Q Consensus        64 --------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~---------  119 (216)
                                    .|++||.+.+. .++.++||||||+++|++++|..||....... ......+.....         
T Consensus       154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  232 (291)
T cd07870         154 SIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF-EQLEKIWTVLGVPTEDTWPGV  232 (291)
T ss_pred             CCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH-HHHHHHHHHcCCCChhhhhhh
Confidence                          28999988764 57889999999999999999999986543211 111111110000         


Q ss_pred             ---Cc-cccccccccccc----hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          120 ---DR-VHELIDPVITQD----EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       120 ---~~-~~~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                         .. ..+.........    .........+.+++.+|++.+|++|||+.|++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         233 SKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence               00 000000000000    000012356789999999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.90  E-value=2.1e-24  Score=173.82  Aligned_cols=150  Identities=23%  Similarity=0.363  Sum_probs=110.7

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeecC--------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ..|+||||   ++.++.......+++.++..++.|++.||+|||+ .+   ++|+||+|+||+++.              
T Consensus        88 ~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~  164 (296)
T cd06618          88 DVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGR  164 (296)
T ss_pred             eEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchh
Confidence            36899999   5555544444579999999999999999999997 46   999999999999974              


Q ss_pred             --------------CCCChhhhhcCC----CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 --------------GYMPPEYALRGF----FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 --------------~y~aPE~~~~~~----~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                    .|+|||.+.+..    ++.++||||||+++|+|++|+.||.......    .......... .   
T Consensus       165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~-~---  236 (296)
T cd06618         165 LVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF----EVLTKILQEE-P---  236 (296)
T ss_pred             ccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH----HHHHHHhcCC-C---
Confidence                          289999987553    7889999999999999999999985322110    0100101110 0   


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        +....   ......++.+++.+||+.+|++||++.++++.
T Consensus       237 --~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         237 --PSLPP---NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             --CCCCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence              11110   00145578999999999999999999999754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.90  E-value=6.2e-24  Score=169.90  Aligned_cols=161  Identities=21%  Similarity=0.324  Sum_probs=110.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .|+||||    +++.+. .....+++.+++.++.|++.||+|||+.+   ++|+|++|+||+++.+              
T Consensus        75 ~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~  150 (286)
T cd07846          75 LYLVFEFVDHTVLDDLE-KYPNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTL  150 (286)
T ss_pred             EEEEEecCCccHHHHHH-hccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeec
Confidence            6899999    555542 23345899999999999999999999998   9999999999999752              


Q ss_pred             ---------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc--chh-------hhhhhhhcc
Q 040682           65 ---------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF--NLL-------GHAWDLWKD  119 (216)
Q Consensus        65 ---------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~--~~~-------~~~~~~~~~  119 (216)
                                     |++||.+.+. .++.++||||||+++||+++|.+||........  ...       .........
T Consensus       151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07846         151 AAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQK  230 (286)
T ss_pred             cCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhcc
Confidence                           8899988764 477899999999999999999988854332110  000       000000000


Q ss_pred             Ccc-ccccccccccc----hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          120 DRV-HELIDPVITQD----EISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       120 ~~~-~~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..+ .....+.....    ......+..+.+++.+||+.+|++||++.++++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         231 NPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             chHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence            000 00000000000    0011245679999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.90  E-value=3.3e-24  Score=170.05  Aligned_cols=144  Identities=24%  Similarity=0.346  Sum_probs=106.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++... ...+++..++.++.|++.||+|||+.+   ++|+|+||+||+++.               
T Consensus        81 ~~l~~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~  156 (266)
T cd06651          81 LTIFMEYMPGGSVKDQLKA-YGALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRL  156 (266)
T ss_pred             EEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence            4789999    56655332 345899999999999999999999988   999999999999864               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||.+.+..++.++|||||||++|++++|+.||.......     ......     ....
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~-----~~~~~~-----~~~~  226 (266)
T cd06651         157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA-----AIFKIA-----TQPT  226 (266)
T ss_pred             ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH-----HHHHHh-----cCCC
Confidence                             2889999988889999999999999999999999985332111     000000     0000


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .+..     +......+.+++ .||..+|++||+++||++
T Consensus       227 ~~~~-----~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         227 NPQL-----PSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             CCCC-----chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            1111     122344566666 799899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.90  E-value=3.8e-24  Score=170.91  Aligned_cols=147  Identities=25%  Similarity=0.401  Sum_probs=109.2

Q ss_pred             eeeeecc---cccccc---cCCCCCCChHHHHHHHHHHHHHHHhhhcC-CCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK---LLDAAN---IDKKRLLDWQVRARIIEGIAQGLLYLHQY-SRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~---~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~~~iiH~dik~~nil~~~------------   63 (216)
                      .|+||||   +|..+.   ......+++.+++.++.|++.||+|||++ +   ++|||+||+||+++.            
T Consensus        75 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~  151 (283)
T cd06617          75 VWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGIS  151 (283)
T ss_pred             EEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecccc
Confidence            6899999   555542   22345789999999999999999999986 6   999999999999975            


Q ss_pred             ----------------CCCChhhhhc----CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 ----------------GYMPPEYALR----GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 ----------------~y~aPE~~~~----~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                      .|++||.+.+    ..++.++|+||||+++|++++|+.||.......    ........     
T Consensus       152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~-----  222 (283)
T cd06617         152 GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF----QQLKQVVE-----  222 (283)
T ss_pred             cccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH----HHHHHHHh-----
Confidence                            2899998865    346889999999999999999999985322111    00000000     


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       ...+..+.    ...+..+.+++.+||..+|++||++.++++
T Consensus       223 -~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         223 -EPSPQLPA----EKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             -cCCCCCCc----cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence             00111111    114567899999999999999999999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.90  E-value=5.5e-24  Score=172.50  Aligned_cols=150  Identities=29%  Similarity=0.344  Sum_probs=111.9

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   ++.++.......+++.++..++.|++.||.|||+.+   ++|+||+|+||+++.                
T Consensus        90 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  166 (308)
T cd06634          90 AWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA  166 (308)
T ss_pred             eEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeec
Confidence            6899999   554543344456899999999999999999999998   999999999999975                


Q ss_pred             ---------CCCChhhhhc---CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccc
Q 040682           64 ---------GYMPPEYALR---GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVIT  131 (216)
Q Consensus        64 ---------~y~aPE~~~~---~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (216)
                               .|++||.+.+   ..++.++|||||||++|++++|..|+.......     ...... ..     ..+...
T Consensus       167 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~-~~-----~~~~~~  235 (308)
T cd06634         167 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALYHIA-QN-----ESPALQ  235 (308)
T ss_pred             CcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-----HHHHHh-hc-----CCCCcC
Confidence                     2899998753   457889999999999999999999975322111     000000 00     001111


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                          .......+.+++.+||+.+|++||++.+++.....
T Consensus       236 ----~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~  270 (308)
T cd06634         236 ----SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV  270 (308)
T ss_pred             ----cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence                11245668899999999999999999999876544

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.90  E-value=4.8e-24  Score=166.35  Aligned_cols=172  Identities=20%  Similarity=0.201  Sum_probs=119.0

Q ss_pred             ceeeeecc---ccccc----ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC----------
Q 040682            2 CKKLVYSK---LLDAA----NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------   64 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~----------   64 (216)
                      +-||||||   .|..+    .....+.++...+++++-|++.|+.|||++-   |+|||+||.|||+..+          
T Consensus       102 ~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen  102 KVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             eEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEee
Confidence            46899999   55554    2233456899999999999999999999998   9999999999998642          


Q ss_pred             --------------------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-------chh
Q 040682           65 --------------------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-------NLL  110 (216)
Q Consensus        65 --------------------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-------~~~  110 (216)
                                                |+|||.+.|. .|+.+.|||++||++.||++-++.|.+......       +.+
T Consensus       179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl  258 (438)
T KOG0666|consen  179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL  258 (438)
T ss_pred             cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence                                      9999999987 699999999999999999999998877654322       112


Q ss_pred             hhhhhhhc---cCccccccc-cc-------cccchhhH----H-------HHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          111 GHAWDLWK---DDRVHELID-PV-------ITQDEISL----S-------MLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       111 ~~~~~~~~---~~~~~~~~~-~~-------~~~~~~~~----~-------~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                      ..+.+.+.   .+++..+.. |.       ......+.    .       -....++++..+|..||-+|.+++++++..
T Consensus       259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~  338 (438)
T KOG0666|consen  259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP  338 (438)
T ss_pred             HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence            22222111   111110000 00       00000000    0       022378999999999999999999998776


Q ss_pred             cccccccc
Q 040682          169 SNEHLNLC  176 (216)
Q Consensus       169 ~~~~~~~~  176 (216)
                      --..-.+|
T Consensus       339 yF~~d~lp  346 (438)
T KOG0666|consen  339 YFTEDPLP  346 (438)
T ss_pred             ccccCCCC
Confidence            55434443

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.90  E-value=4.6e-24  Score=167.90  Aligned_cols=146  Identities=21%  Similarity=0.276  Sum_probs=111.6

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+|+||    +|.++... ....+++..+..++.|++.||+|||+.+   ++|+|+||+||+++.              
T Consensus        74 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~  150 (257)
T cd08225          74 LFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIAR  150 (257)
T ss_pred             EEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccch
Confidence            5899999    66665333 3335899999999999999999999998   999999999999864              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||.+.+..++.++|+||||++++++++|..||......     ........ .    ...
T Consensus       151 ~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~-~----~~~  220 (257)
T cd08225         151 QLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH-----QLVLKICQ-G----YFA  220 (257)
T ss_pred             hccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-----HHHHHHhc-c----cCC
Confidence                            188999998888999999999999999999999998533211     11111111 0    001


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      +.      .......+.+++.+||+.+|++||++.++++.
T Consensus       221 ~~------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         221 PI------SPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             CC------CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            10      11134578999999999999999999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.90  E-value=8.2e-24  Score=167.29  Aligned_cols=151  Identities=28%  Similarity=0.412  Sum_probs=112.5

Q ss_pred             eeeeecc----cccccccC--CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC------------
Q 040682            3 KKLVYSK----LLDAANID--KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~------------   64 (216)
                      .|+||||    +|.++...  ....+++..+..++.|++.||+|||+.+   ++|+|++|+||+++.+            
T Consensus        74 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~  150 (267)
T cd06610          74 LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSA  150 (267)
T ss_pred             EEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHH
Confidence            5899999    56555322  2356899999999999999999999998   9999999999998751            


Q ss_pred             ---------------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcc
Q 040682           65 ---------------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV  122 (216)
Q Consensus        65 ---------------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (216)
                                           |++||.+... .++.++|+||||+++|+|++|+.||........ .    .......  
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~----~~~~~~~--  223 (267)
T cd06610         151 SLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-L----MLTLQND--  223 (267)
T ss_pred             HhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-H----HHHhcCC--
Confidence                                 7899998877 788999999999999999999999854332110 0    1101000  


Q ss_pred             ccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          123 HELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                          .+...........+..+.+++.+||+.+|++||++.+++++
T Consensus       224 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         224 ----PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             ----CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                01111111111256778999999999999999999999863

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=5.2e-24  Score=175.76  Aligned_cols=149  Identities=18%  Similarity=0.286  Sum_probs=124.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      -|||+|.    .|.++...+...+.+..+++++.||+.||.|+|.-.   ++|||+||+|+++..               
T Consensus        92 lyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNk  168 (864)
T KOG4717|consen   92 LYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNK  168 (864)
T ss_pred             EEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeecccccc
Confidence            4899999    777888888889999999999999999999999987   999999999998854               


Q ss_pred             --------------CCCChhhhhcCCCC-cchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 --------------GYMPPEYALRGFFS-IKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~-~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                    .|.|||.+.|..|+ .++||||+|+++|-|++|++||...++.+.              +.-++|.
T Consensus       169 f~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET--------------LTmImDC  234 (864)
T KOG4717|consen  169 FQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET--------------LTMIMDC  234 (864)
T ss_pred             CCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh--------------hhhhhcc
Confidence                          29999999999887 678999999999999999999976665442              2223333


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH--HHccc
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS--MISNE  171 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~--~L~~~  171 (216)
                      .   ...+...+.++.+++..||+.||.+|.+..||..  .|+..
T Consensus       235 K---YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~  276 (864)
T KOG4717|consen  235 K---YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAG  276 (864)
T ss_pred             c---ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCC
Confidence            2   2344447889999999999999999999999973  45543

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=5.2e-24  Score=168.21  Aligned_cols=151  Identities=23%  Similarity=0.193  Sum_probs=114.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+|+||    +|..+.. ..+.+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.               
T Consensus        72 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  147 (260)
T cd05611          72 LYLVMEYLNGGDCASLIK-TLGGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNG  147 (260)
T ss_pred             EEEEEeccCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceec
Confidence            5899999    6666633 3356899999999999999999999998   999999999999864               


Q ss_pred             ----------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccc
Q 040682           64 ----------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQD  133 (216)
Q Consensus        64 ----------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (216)
                                .|++||.+.+..++.++||||||++++++++|..||.......      .+.........    .   ..
T Consensus       148 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~----~---~~  214 (260)
T cd05611         148 LENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA------VFDNILSRRIN----W---PE  214 (260)
T ss_pred             cccccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhcccC----C---CC
Confidence                      2899999988888999999999999999999999985432211      11111111100    0   00


Q ss_pred             hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          134 EISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       134 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      .....+...+.+++.+||+.+|++||++.++.+.|..
T Consensus       215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~  251 (260)
T cd05611         215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH  251 (260)
T ss_pred             cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence            0111245678999999999999999988777776654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.90  E-value=4e-24  Score=168.65  Aligned_cols=146  Identities=23%  Similarity=0.294  Sum_probs=112.9

Q ss_pred             eeeeecc----ccccccc---CCCCCCChHHHHHHHHHHHHHHHhhh-----cCCCCCeecCCCCCCceeecC-------
Q 040682            3 KKLVYSK----LLDAANI---DKKRLLDWQVRARIIEGIAQGLLYLH-----QYSRLRIIHRDLKASNILLDS-------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~~~iiH~dik~~nil~~~-------   63 (216)
                      .|+||||    +|.++..   .....+++.+++.++.|++.||+|||     +.+   ++|+||+|+||+++.       
T Consensus        76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~  152 (265)
T cd08217          76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLG  152 (265)
T ss_pred             EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEe
Confidence            4899999    6666632   23567899999999999999999999     666   999999999999975       


Q ss_pred             ----------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           64 ----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        64 ----------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                            .|++||.+.+..++.++|+||||++++++++|..|+......  ..    ........
T Consensus       153 d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~----~~~~~~~~  226 (265)
T cd08217         153 DFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--QL----ASKIKEGK  226 (265)
T ss_pred             cccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--HH----HHHHhcCC
Confidence                                  289999998888999999999999999999999998643311  11    11111110


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .     +.     .+......+.+++.+||+.+|++||++.+|+++
T Consensus       227 ~-----~~-----~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         227 F-----RR-----IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             C-----CC-----CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            0     11     111245678999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.90  E-value=5.4e-24  Score=171.05  Aligned_cols=159  Identities=19%  Similarity=0.196  Sum_probs=110.3

Q ss_pred             eeeeecc---cccccccC----CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-C----------
Q 040682            3 KKLVYSK---LLDAANID----KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-G----------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-~----------   64 (216)
                      .|+||||   ++.++...    ....+++.+++.++.|++.||+|||+++   ++|+||||+||+++. +          
T Consensus        81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg~  157 (295)
T cd07837          81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLGL  157 (295)
T ss_pred             EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeeccc
Confidence            5899999   44444211    1346899999999999999999999998   999999999999986 1          


Q ss_pred             -------------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc---Cc
Q 040682           65 -------------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD---DR  121 (216)
Q Consensus        65 -------------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~---~~  121 (216)
                                         |+|||.+.+. .++.++||||||+++|+|++|..||........  ..........   ..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~  235 (295)
T cd07837         158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ--LLHIFKLLGTPTEQV  235 (295)
T ss_pred             ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHHHhCCCChhh
Confidence                               8999988654 578999999999999999999999865332111  0000000000   00


Q ss_pred             ccccc-------cccccc---chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          122 VHELI-------DPVITQ---DEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       122 ~~~~~-------~~~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .....       .+....   .........++.+++.+||+.+|.+||++.|++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            00000       000000   0011124567899999999999999999998875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.90  E-value=5.6e-24  Score=167.28  Aligned_cols=147  Identities=31%  Similarity=0.394  Sum_probs=111.6

Q ss_pred             eeeeecc----cccccccCCCCC-CChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRL-LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++....... +++.++..++.|++.||+|||+.+   ++|+||||+||+++.              
T Consensus        76 ~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~  152 (258)
T smart00219       76 LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRD  152 (258)
T ss_pred             eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCcee
Confidence            5789999    666664433333 899999999999999999999998   999999999999975              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|++||...+..++.++|||++|++++++++ |..|+......  ...    .........   
T Consensus       153 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~--~~~----~~~~~~~~~---  223 (258)
T smart00219      153 LYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE--EVL----EYLKKGYRL---  223 (258)
T ss_pred             cccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH--HHH----HHHhcCCCC---
Confidence                            2789999988889999999999999999998 77776432111  111    111111100   


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                        ..     +...+.++.+++.+||..+|++||++.++++.|
T Consensus       224 --~~-----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      224 --PK-----PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             --CC-----CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence              00     111456789999999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.90  E-value=1.2e-23  Score=167.16  Aligned_cols=150  Identities=24%  Similarity=0.376  Sum_probs=110.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.... ..+++..+..++.|++.||.|||+++   ++|+||+|+||+++.               
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~~~~  158 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISKKS  158 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccccccc
Confidence            5899999    666663333 57899999999999999999999998   999999999999864               


Q ss_pred             ----------------CCCChhhhhcCC--CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 ----------------GYMPPEYALRGF--FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~--~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                      .|++||.+.+..  ++.++|+||||+++|++++|..|+......     .......... ..  
T Consensus       159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~-~~--  230 (272)
T cd06629         159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI-----AAMFKLGNKR-SA--  230 (272)
T ss_pred             cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH-----HHHHHhhccc-cC--
Confidence                            288999987654  789999999999999999999998432211     1111111000 00  


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        +.... ......+..+.+++..||+.+|++||++.+|+++
T Consensus       231 --~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         231 --PPIPP-DVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             --CcCCc-cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence              11111 1111245678999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.90  E-value=4.5e-24  Score=170.64  Aligned_cols=161  Identities=17%  Similarity=0.172  Sum_probs=110.0

Q ss_pred             ceeeeecc---cccccc-cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            2 CKKLVYSK---LLDAAN-IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ..++||||   +|..+. ......+++.++..++.|++.||+|||+.+   ++|+||+|+||+++.              
T Consensus        73 ~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~  149 (284)
T cd07860          73 KLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA  149 (284)
T ss_pred             cEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhh
Confidence            36899999   455542 233456899999999999999999999998   999999999999975              


Q ss_pred             ---------------CCCChhhhhcCC-CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhh----------hhhh
Q 040682           64 ---------------GYMPPEYALRGF-FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHA----------WDLW  117 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~-~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~----------~~~~  117 (216)
                                     .|++||.+.+.. ++.++||||||+++|++++|+.||........ .....          ++..
T Consensus       150 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  228 (284)
T cd07860         150 FGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRTLGTPDEVVWPGV  228 (284)
T ss_pred             cccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCChhhhhhh
Confidence                           289999887654 58889999999999999999999864432111 00000          0000


Q ss_pred             ccC-cccccccccccc--chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          118 KDD-RVHELIDPVITQ--DEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       118 ~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ... .....+......  ..........+.+++.+||+.+|++||++.++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         229 TSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             hHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            000 000000000000  0000113456789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.90  E-value=1.8e-23  Score=163.45  Aligned_cols=148  Identities=25%  Similarity=0.331  Sum_probs=113.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++.......+++..+..++.+++.||+|||..+   ++|+|++|+||+++.               
T Consensus        72 ~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~  148 (253)
T cd05122          72 LWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQL  148 (253)
T ss_pred             EEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeeccccccc
Confidence            6789999    666664444467999999999999999999999988   999999999999974               


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                   .|++||.+.+...+.++||||||++++++++|..|+........  .   .. ........     .
T Consensus       149 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~---~~-~~~~~~~~-----~  217 (253)
T cd05122         149 SDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA--L---FK-IATNGPPG-----L  217 (253)
T ss_pred             cccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH--H---HH-HHhcCCCC-----c
Confidence                         28999999888889999999999999999999999854321110  0   00 00000000     1


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .   ........+.+++.+||+.+|++||++.+++++
T Consensus       218 ~---~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         218 R---NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             C---cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            0   111125678999999999999999999998753

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.90  E-value=2e-24  Score=168.02  Aligned_cols=149  Identities=20%  Similarity=0.281  Sum_probs=122.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      -|+||||    ++.+..+..+++|++.++..++++.+.||+|||...   -||||||..|||++-.              
T Consensus       103 LWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQL  179 (502)
T KOG0574|consen  103 LWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQL  179 (502)
T ss_pred             eEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchh
Confidence            3899999    888988888889999999999999999999999876   8999999999999751              


Q ss_pred             ---------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           65 ---------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        65 ---------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                     |+|||++..-.|+.++||||+|++-.||..|++|+..-..+..              +.-+....
T Consensus       180 TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA--------------IFMIPT~P  245 (502)
T KOG0574|consen  180 TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA--------------IFMIPTKP  245 (502)
T ss_pred             hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce--------------eEeccCCC
Confidence                           9999999999999999999999999999999999753333221              11111111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                      .+...-+..++.++-+++..||.+.|++|.++.+++++-
T Consensus       246 PPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~  284 (502)
T KOG0574|consen  246 PPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHT  284 (502)
T ss_pred             CCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence            112234455888999999999999999999999888753

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.90  E-value=1e-23  Score=169.81  Aligned_cols=146  Identities=21%  Similarity=0.276  Sum_probs=111.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+|+||    +|.++..  +..+++.++..++.|++.||.|||+++   ++|+|+||+||+++.               
T Consensus        91 ~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~  165 (293)
T cd06647          91 LWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI  165 (293)
T ss_pred             EEEEEecCCCCcHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecc
Confidence            5899999    6665532  235789999999999999999999998   999999999999864               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|++||.+.+..++.++|+||||+++|++++|..||..........  ..   ..        ...
T Consensus       166 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~--~~---~~--------~~~  232 (293)
T cd06647         166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY--LI---AT--------NGT  232 (293)
T ss_pred             cccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee--eh---hc--------CCC
Confidence                          1899999988889999999999999999999999986433211100  00   00        000


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       .....+......+.+++.+||+.+|++||++.+++.+
T Consensus       233 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         233 -PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             -CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             0011111245568899999999999999999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.90  E-value=5e-24  Score=170.34  Aligned_cols=161  Identities=20%  Similarity=0.231  Sum_probs=112.9

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      ..++||||   +|.++.......+++.++..++.|++.||+|||+.+   ++|+||||+||+++.               
T Consensus        73 ~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~  149 (286)
T cd07832          73 GFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLF  149 (286)
T ss_pred             eeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccc
Confidence            36899999   676664444567999999999999999999999998   999999999999864               


Q ss_pred             ---------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhh-----------hhh
Q 040682           64 ---------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHA-----------WDL  116 (216)
Q Consensus        64 ---------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~-----------~~~  116 (216)
                                     .|+|||.+.+. .++.++||||+|++++++++|.++|........  ....           |..
T Consensus       150 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  227 (286)
T cd07832         150 SEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ--LAIVFRTLGTPNEETWPG  227 (286)
T ss_pred             cCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH--HHHHHHHcCCCChHHHhh
Confidence                           28899988654 468999999999999999999777654332111  1010           110


Q ss_pred             hccC-cccccccccccc---chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          117 WKDD-RVHELIDPVITQ---DEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       117 ~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .... .......+....   .....+....+.+++.+||+.+|++||++++++.+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         228 LTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             ccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            0000 000000000000   00111135788999999999999999999998764

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.90  E-value=8.3e-24  Score=169.00  Aligned_cols=161  Identities=19%  Similarity=0.194  Sum_probs=110.7

Q ss_pred             ceeeeecc---cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            2 CKKLVYSK---LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ..|+||||   +|..+... ....+++.++..++.|++.||+|||+++   ++|+|++|+||+++.              
T Consensus        72 ~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~  148 (283)
T cd07835          72 KLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARA  148 (283)
T ss_pred             eEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccc
Confidence            36899999   55555322 2246899999999999999999999988   999999999999964              


Q ss_pred             ---------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhh----------hhhhh
Q 040682           64 ---------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGH----------AWDLW  117 (216)
Q Consensus        64 ---------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~----------~~~~~  117 (216)
                                     .|+|||.+.+. .++.++||||||+++|++++|..||........ ....          .|...
T Consensus       149 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~  227 (283)
T cd07835         149 FGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ-LFRIFRTLGTPDEDVWPGV  227 (283)
T ss_pred             cCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHHhhhh
Confidence                           18999987764 578899999999999999999999864432110 0000          00000


Q ss_pred             cc-Ccccccccc-c-cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          118 KD-DRVHELIDP-V-ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       118 ~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .. ......+.. . .............+.+++.+||+.+|++||++.|+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         228 TSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             hhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            00 000000000 0 0000011113467889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.90  E-value=1.6e-23  Score=188.00  Aligned_cols=152  Identities=22%  Similarity=0.276  Sum_probs=111.6

Q ss_pred             eeeeecc----ccccccc---CCCCCCChHHHHHHHHHHHHHHHhhhcCCC----CCeecCCCCCCceeecC--------
Q 040682            3 KKLVYSK----LLDAANI---DKKRLLDWQVRARIIEGIAQGLLYLHQYSR----LRIIHRDLKASNILLDS--------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~----~~iiH~dik~~nil~~~--------   63 (216)
                      .||||||    +|.+++.   .....+++..++.|+.||+.||+|||+.+.    .+||||||||+|||++.        
T Consensus        89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i  168 (1021)
T PTZ00266         89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI  168 (1021)
T ss_pred             EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence            5899999    5665532   223569999999999999999999998532    34999999999999841        


Q ss_pred             -------------------------------------CCCChhhhhcC--CCCcchhhhhHHHHHHHHHhCCCCCCcCCC
Q 040682           64 -------------------------------------GYMPPEYALRG--FFSIKSDVFSFGVLMLEILSGKKSTAVYNT  104 (216)
Q Consensus        64 -------------------------------------~y~aPE~~~~~--~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~  104 (216)
                                                           .|+|||++.+.  .++.++|||||||++|+|++|..||.....
T Consensus       169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~  248 (1021)
T PTZ00266        169 TAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN  248 (1021)
T ss_pred             cccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence                                                 29999998653  588999999999999999999999864322


Q ss_pred             CccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHH--HHHcc
Q 040682          105 GSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVV--SMISN  170 (216)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl--~~L~~  170 (216)
                      ..    .. ...+...       +.++...    .+..+.+|+..||+.+|.+||++.|++  ..+..
T Consensus       249 ~~----ql-i~~lk~~-------p~lpi~~----~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~  300 (1021)
T PTZ00266        249 FS----QL-ISELKRG-------PDLPIKG----KSKELNILIKNLLNLSAKERPSALQCLGYQIIKN  300 (1021)
T ss_pred             HH----HH-HHHHhcC-------CCCCcCC----CCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence            11    11 1111110       1111111    345688999999999999999999998  44443

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.90  E-value=1.5e-24  Score=184.00  Aligned_cols=146  Identities=27%  Similarity=0.338  Sum_probs=117.2

Q ss_pred             eeeecc-----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            4 KLVYSK-----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         4 ~lV~Ey-----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      +||||.     +|+.+...++..|-....-.++.|||.||+||-+++   +||||+..+|+|+..               
T Consensus       186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaL  262 (1039)
T KOG0199|consen  186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRAL  262 (1039)
T ss_pred             hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceecc
Confidence            689999     444444457778888888999999999999999998   999999999999864               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|.|||.+....|+.++|||+||+++|||++ |+.||.+.....               +.+.
T Consensus       263 g~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q---------------IL~~  327 (1039)
T KOG0199|consen  263 GENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ---------------ILKN  327 (1039)
T ss_pred             CCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH---------------HHHh
Confidence                             2999999999999999999999999999998 778876544332               2222


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                      +|.. ...+.++.|++.++++|..||...|++||++..|++.+
T Consensus       328 iD~~-erLpRPk~csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  328 IDAG-ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             cccc-ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence            3311 11223334899999999999999999999999997433

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.90  E-value=4.8e-24  Score=166.65  Aligned_cols=135  Identities=22%  Similarity=0.170  Sum_probs=104.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++... ...+++..+..++.|++.||+|||+.+   ++||||||+||+++.               
T Consensus        60 ~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~  135 (237)
T cd05576          60 VFLVLQHAEGGKLWSHISK-FLNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEV  135 (237)
T ss_pred             EEEEEecCCCCCHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhcc
Confidence            5899999    56555332 345899999999999999999999998   999999999999875               


Q ss_pred             -----------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccccc
Q 040682           64 -----------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQ  132 (216)
Q Consensus        64 -----------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (216)
                                 .|++||...+..++.++|+||+|++++|+++|..++.......                .......   
T Consensus       136 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~----------------~~~~~~~---  196 (237)
T cd05576         136 EDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI----------------NTHTTLN---  196 (237)
T ss_pred             ccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc----------------ccccccC---
Confidence                       1899999888888999999999999999999998754221110                0000000   


Q ss_pred             chhhHHHHHHHHHHHHhccccCCCCCCCHH
Q 040682          133 DEISLSMLMRYVKVALLCVQETVADRPTMS  162 (216)
Q Consensus       133 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  162 (216)
                        .+......+.+++.+||+.||++||++.
T Consensus       197 --~~~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         197 --IPEWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             --CcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence              1111455788999999999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1e-23  Score=168.03  Aligned_cols=144  Identities=20%  Similarity=0.350  Sum_probs=109.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++...  +.+++..+..++.|++.||.|||+.+   ++|+||+|+||+++..              
T Consensus        77 ~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  151 (277)
T cd06917          77 LWIIMEYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALL  151 (277)
T ss_pred             EEEEEecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeec
Confidence            5799999    66666332  37899999999999999999999998   9999999999999841              


Q ss_pred             ---------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           65 ---------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        65 ---------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     |++||.+.+. .++.++|+||||+++|+|++|..||........     . ...     .....+
T Consensus       152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-----~-~~~-----~~~~~~  220 (277)
T cd06917         152 NQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-----M-MLI-----PKSKPP  220 (277)
T ss_pred             CCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-----h-hcc-----ccCCCC
Confidence                           8899988654 578899999999999999999999854322110     0 000     000011


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .+...    .....+.+++.+||+.+|++||++.+++.
T Consensus       221 ~~~~~----~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         221 RLEDN----GYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             CCCcc----cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            11111    13457889999999999999999999975

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.90  E-value=7.9e-24  Score=171.99  Aligned_cols=147  Identities=29%  Similarity=0.396  Sum_probs=110.6

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   ++.++.......+++.++..++.|++.||.|||+.+   ++|+|++|+||+++.                
T Consensus        96 ~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~  172 (313)
T cd06633          96 AWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSS  172 (313)
T ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccC
Confidence            6899999   555554444567999999999999999999999998   999999999999975                


Q ss_pred             ---------CCCChhhhh---cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccc
Q 040682           64 ---------GYMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVIT  131 (216)
Q Consensus        64 ---------~y~aPE~~~---~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (216)
                               .|++||.+.   +..++.++||||||+++|++++|..|+........  .   ..... ..     .+...
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~--~---~~~~~-~~-----~~~~~  241 (313)
T cd06633         173 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--L---YHIAQ-ND-----SPTLQ  241 (313)
T ss_pred             CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH--H---HHHHh-cC-----CCCCC
Confidence                     289999874   34688899999999999999999999754322111  0   00000 00     01111


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .    ......+.+++.+||+.+|.+||++.+++..
T Consensus       242 ~----~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         242 S----NEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             c----cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1    1134468899999999999999999998854

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.90  E-value=1.6e-23  Score=165.87  Aligned_cols=148  Identities=24%  Similarity=0.352  Sum_probs=112.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|+++.. ..+.+++..+..++.|++.||.|||+++   ++|+||||+||+++.               
T Consensus        78 ~~~v~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~  153 (268)
T cd06630          78 FNLFVEWMAGGSVSHLLS-KYGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAAR  153 (268)
T ss_pred             EEEEEeccCCCcHHHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence            5799999    6666633 3457899999999999999999999998   999999999999853               


Q ss_pred             -------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 -------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                         .|++||.+.+..++.++|||++|++++++++|..||........  ..........     
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~~-----  226 (268)
T cd06630         154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH--LALIFKIASA-----  226 (268)
T ss_pred             cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch--HHHHHHHhcc-----
Confidence                               28899999888899999999999999999999999853322111  1111110000     


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ..     ....+......+.+++.+||+.+|++||++.++++
T Consensus       227 ~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         227 TT-----APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             CC-----CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            00     11122225567899999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.90  E-value=1.7e-23  Score=169.17  Aligned_cols=160  Identities=20%  Similarity=0.199  Sum_probs=111.3

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      +.|+|+||   ++..........+++.++..++.|+++||+|||+++   ++|+|+||+||+++.+              
T Consensus        89 ~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  165 (311)
T cd07866          89 SVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGLARPY  165 (311)
T ss_pred             eEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCccchhc
Confidence            35899999   444443444557999999999999999999999998   9999999999998641              


Q ss_pred             --------------------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhh
Q 040682           65 --------------------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW  117 (216)
Q Consensus        65 --------------------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~  117 (216)
                                                |+|||.+.+. .++.++||||||+++|+|++|.+||........  ....+...
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~--~~~~~~~~  243 (311)
T cd07866         166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ--LHLIFKLC  243 (311)
T ss_pred             cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHh
Confidence                                      7899988764 578999999999999999999999865433211  01111000


Q ss_pred             cc---------Cccccc----cccccccc--hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          118 KD---------DRVHEL----IDPVITQD--EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       118 ~~---------~~~~~~----~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ..         ......    .....+..  .........+.+++.+||+.+|.+||++.|++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            00         000000    00000000  000113357889999999999999999998875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.90  E-value=8.5e-24  Score=166.57  Aligned_cols=149  Identities=26%  Similarity=0.350  Sum_probs=111.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.. ..+.+++.++..++.|+++||++||+.+   ++|+||||+||+++.+              
T Consensus        73 ~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~  148 (260)
T PF00069_consen   73 LYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKL  148 (260)
T ss_dssp             EEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEES
T ss_pred             cccccccccccccccccc-cccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence            4689999    4555533 4567899999999999999999999998   9999999999999851              


Q ss_pred             ---------------CCChhhhh-cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           65 ---------------YMPPEYAL-RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        65 ---------------y~aPE~~~-~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     |.|||... +..++.++||||+|+++|+|++|..|+........  ........         ..
T Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~--~~~~~~~~---------~~  217 (260)
T PF00069_consen  149 SENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQ--LEIIEKIL---------KR  217 (260)
T ss_dssp             TSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHH--HHHHHHHH---------HT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccchhh--hhhhhhcc---------cc
Confidence                           99999998 77899999999999999999999999864411010  00000000         00


Q ss_pred             cccc-chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          129 VITQ-DEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       129 ~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .... ..........+.+++.+||+.+|++||++.++++
T Consensus       218 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  218 PLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             cccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0000 0000001368999999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=8.3e-24  Score=173.12  Aligned_cols=102  Identities=16%  Similarity=0.237  Sum_probs=74.2

Q ss_pred             CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc----chhhhhhhhhcc---------Cccccccc----
Q 040682           65 YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF----NLLGHAWDLWKD---------DRVHELID----  127 (216)
Q Consensus        65 y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~----~~~~~~~~~~~~---------~~~~~~~~----  127 (216)
                      |++||++.+..|+..+|||||+|++|||.||...|+.......    ++.+++.+.+..         +...+.++    
T Consensus       417 YRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~  496 (590)
T KOG1290|consen  417 YRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGE  496 (590)
T ss_pred             ccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccc
Confidence            9999999999999999999999999999999998876654332    233333222211         11112221    


Q ss_pred             --------------cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          128 --------------PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       128 --------------~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                                    -......++.+.+.++.+|+.-+|+.+|++|||+.+.++
T Consensus       497 LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~  549 (590)
T KOG1290|consen  497 LRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK  549 (590)
T ss_pred             eecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence                          111233567778999999999999999999999998764

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.90  E-value=6.7e-24  Score=176.29  Aligned_cols=147  Identities=17%  Similarity=0.213  Sum_probs=109.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++..  ...++...+..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       118 ~~lv~Ey~~gg~L~~~l~--~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~  192 (370)
T cd05596         118 LYMVMEYMPGGDLVNLMS--NYDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM  192 (370)
T ss_pred             EEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence            6899999    5655532  235889999999999999999999998   999999999999974               


Q ss_pred             ---------------CCCChhhhhcC----CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 ---------------GYMPPEYALRG----FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 ---------------~y~aPE~~~~~----~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                     .|+|||++.+.    .++.++|||||||++|||++|..||.......     ...........  
T Consensus       193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-----~~~~i~~~~~~--  265 (370)
T cd05596         193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-----TYSKIMDHKNS--  265 (370)
T ss_pred             cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH-----HHHHHHcCCCc--
Confidence                           28999998754    47899999999999999999999986533211     00000000000  


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVAD--RPTMSDVVSM  167 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~evl~~  167 (216)
                         ...+.   ....+..+.+++..|++.+|.+  |+++.+++++
T Consensus       266 ---~~~~~---~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         266 ---LTFPD---DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             ---CCCCC---cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence               00000   0114567889999999998987  9999999765

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.90  E-value=4.5e-24  Score=172.68  Aligned_cols=150  Identities=19%  Similarity=0.226  Sum_probs=113.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.. ..+.+++..+..++.|++.||+|||+.+   ++|+|+||+||+++.               
T Consensus        76 ~~lv~e~~~g~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~  151 (305)
T cd05609          76 LCMVMEYVEGGDCATLLK-NIGALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIG  151 (305)
T ss_pred             EEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCcccc
Confidence            4899999    6666643 3356899999999999999999999998   999999999999863               


Q ss_pred             -----------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhh
Q 040682           64 -----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAW  114 (216)
Q Consensus        64 -----------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~  114 (216)
                                                   .|++||.+.+..++.++|+||||+++||+++|..||.......      ..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~------~~  225 (305)
T cd05609         152 LMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE------LF  225 (305)
T ss_pred             CcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HH
Confidence                                         2889999888889999999999999999999999985332111      01


Q ss_pred             hhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          115 DLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      .......   ...+...    . ..+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus       226 ~~~~~~~---~~~~~~~----~-~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         226 GQVISDD---IEWPEGD----E-ALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             HHHHhcc---cCCCCcc----c-cCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            1000000   0011110    0 145568999999999999999998888888876

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.90  E-value=3.9e-24  Score=175.81  Aligned_cols=146  Identities=22%  Similarity=0.254  Sum_probs=117.3

Q ss_pred             eeeeecc----cccccccCCC-CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDKK-RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      -++||||    ++.+.....+ ..++++++..|+.|++.|+.|||++.   |+|||+|+.||+++.              
T Consensus        79 l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~  155 (426)
T KOG0589|consen   79 LCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKI  155 (426)
T ss_pred             EEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhh
Confidence            4789999    7777644444 57999999999999999999999887   999999999999976              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|++||.+.+.+|..++||||+||++|||++=+++|...+....          -.+.......|
T Consensus       156 l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L----------i~ki~~~~~~P  225 (426)
T KOG0589|consen  156 LNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL----------ILKINRGLYSP  225 (426)
T ss_pred             cCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH----------HHHHhhccCCC
Confidence                           29999999999999999999999999999999998864443221          11111111122


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                            .+...+.++..++..|+..+|..||++.+++..
T Consensus       226 ------lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  226 ------LPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             ------CCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence                  222367789999999999999999999999865

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.90  E-value=6.5e-24  Score=176.99  Aligned_cols=148  Identities=21%  Similarity=0.285  Sum_probs=107.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++..+..++.|++.||+|||+.+   |+||||||+|||++.               
T Consensus        76 ~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~  151 (381)
T cd05626          76 LYFVMDYIPGGDMMSLLI-RMEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGF  151 (381)
T ss_pred             EEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence            6899999    5555533 3356899999999999999999999998   999999999999842               


Q ss_pred             -------------------------------------------------------------CCCChhhhhcCCCCcchhh
Q 040682           64 -------------------------------------------------------------GYMPPEYALRGFFSIKSDV   82 (216)
Q Consensus        64 -------------------------------------------------------------~y~aPE~~~~~~~~~~~Dv   82 (216)
                                                                                   .|+|||.+.+..++.++||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Di  231 (381)
T cd05626         152 RWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDW  231 (381)
T ss_pred             ccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccce
Confidence                                                                         2889999998899999999


Q ss_pred             hhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHh--ccccCCCCCCC
Q 040682           83 FSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALL--CVQETVADRPT  160 (216)
Q Consensus        83 ~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--cl~~~p~~Rps  160 (216)
                      |||||++|||++|..||.........     .........     ...+.   ......++.+++.+  |+..++..|++
T Consensus       232 wSlG~il~elltG~~Pf~~~~~~~~~-----~~i~~~~~~-----~~~~~---~~~~s~~~~dli~~ll~~~~~~~~R~~  298 (381)
T cd05626         232 WSVGVILFEMLVGQPPFLAPTPTETQ-----LKVINWENT-----LHIPP---QVKLSPEAVDLITKLCCSAEERLGRNG  298 (381)
T ss_pred             eehhhHHHHHHhCCCCCcCCCHHHHH-----HHHHccccc-----cCCCC---CCCCCHHHHHHHHHHccCcccccCCCC
Confidence            99999999999999998654322110     000000000     00000   00134456777766  66777778999


Q ss_pred             HHHHHHH
Q 040682          161 MSDVVSM  167 (216)
Q Consensus       161 ~~evl~~  167 (216)
                      +.+++.+
T Consensus       299 ~~~~l~h  305 (381)
T cd05626         299 ADDIKAH  305 (381)
T ss_pred             HHHHhcC
Confidence            9999865

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.90  E-value=1e-23  Score=172.94  Aligned_cols=162  Identities=20%  Similarity=0.260  Sum_probs=113.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   +|.++.. ..+.+++.++..++.|++.||.|||+++   ++|+||||+||+++.                
T Consensus        84 ~~lv~e~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  159 (337)
T cd07858          84 VYIVYELMDTDLHQIIR-SSQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLARTTS  159 (337)
T ss_pred             EEEEEeCCCCCHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence            5899999   5555533 3356999999999999999999999998   999999999999864                


Q ss_pred             -------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh-----------hhc
Q 040682           64 -------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD-----------LWK  118 (216)
Q Consensus        64 -------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~-----------~~~  118 (216)
                                   .|+|||.+.+ ..++.++|||||||++|+|++|..||........  ......           ...
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  237 (337)
T cd07858         160 EKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQ--LKLITELLGSPSEEDLGFIR  237 (337)
T ss_pred             CCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHH--HHHHHHHhCCCChHHhhhcC
Confidence                         1899998875 4688999999999999999999999865421110  000000           000


Q ss_pred             cCccccccc-----cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hcc
Q 040682          119 DDRVHELID-----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM--ISN  170 (216)
Q Consensus       119 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--L~~  170 (216)
                      .......+.     +...........+..+.+++.+||+.+|++||++.+++++  ++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~  296 (337)
T cd07858         238 NEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS  296 (337)
T ss_pred             chhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence            000000000     0000001111256678999999999999999999999876  544

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.90  E-value=1.1e-23  Score=172.60  Aligned_cols=161  Identities=22%  Similarity=0.236  Sum_probs=111.9

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .|+||||   +|..+.. ....+++..+..++.|++.||+|||+.+   ++|+||||+||+++.+               
T Consensus        83 ~~lv~e~~~~~l~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~  158 (334)
T cd07855          83 VYVVMDLMESDLHHIIH-SDQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLS  158 (334)
T ss_pred             EEEEEehhhhhHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceeec
Confidence            5899999   5555533 3345999999999999999999999998   9999999999999751               


Q ss_pred             ------------------CCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccch---------hhhhhhh
Q 040682           65 ------------------YMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNL---------LGHAWDL  116 (216)
Q Consensus        65 ------------------y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~---------~~~~~~~  116 (216)
                                        |++||.+.+ ..++.++||||||+++|+|++|+.||..........         .......
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~  238 (334)
T cd07855         159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNR  238 (334)
T ss_pred             ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhh
Confidence                              789998866 468899999999999999999999986543211100         0000000


Q ss_pred             hccCccccccc--cccccc---hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          117 WKDDRVHELID--PVITQD---EISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       117 ~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .......+..+  +.....   ......+..+.+++.+||+.+|++||++.+++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         239 IGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             hchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            00000000000  000000   0111246779999999999999999999998863

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.90  E-value=8.3e-24  Score=168.93  Aligned_cols=159  Identities=21%  Similarity=0.268  Sum_probs=112.3

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .++||||   +|..+.......+++.+++.++.|++.||+|||+.+   ++|+||+|+||+++.+               
T Consensus        75 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~  151 (287)
T cd07840          75 IYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYT  151 (287)
T ss_pred             EEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeecc
Confidence            6899999   555554444457999999999999999999999998   9999999999999851               


Q ss_pred             ---------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc---cCcc---
Q 040682           65 ---------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK---DDRV---  122 (216)
Q Consensus        65 ---------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~---  122 (216)
                                     |++||.+.+. .++.++||||||+++|++++|..||........  .........   ....   
T Consensus       152 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  229 (287)
T cd07840         152 KRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ--LEKIFELCGSPTDENWPGV  229 (287)
T ss_pred             CCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCchhhcccc
Confidence                           8999977654 578999999999999999999999865442211  111111000   0000   


Q ss_pred             -----cccccccccc-----chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          123 -----HELIDPVITQ-----DEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       123 -----~~~~~~~~~~-----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                           .....+....     ......++..+.+++.+||+.+|.+||++.++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence                 0000000000     0011102567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.90  E-value=5.9e-24  Score=176.84  Aligned_cols=147  Identities=19%  Similarity=0.249  Sum_probs=107.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. ...+.+++..+..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        76 ~~lv~E~~~~g~L~~~i-~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~  151 (376)
T cd05598          76 LYFVMDYIPGGDMMSLL-IRLGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (376)
T ss_pred             EEEEEeCCCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccc
Confidence            5899999    566653 33456899999999999999999999998   999999999999742               


Q ss_pred             ---------------------------------------------------------CCCChhhhhcCCCCcchhhhhHH
Q 040682           64 ---------------------------------------------------------GYMPPEYALRGFFSIKSDVFSFG   86 (216)
Q Consensus        64 ---------------------------------------------------------~y~aPE~~~~~~~~~~~Dv~s~G   86 (216)
                                                                               .|+|||++.+..++.++||||||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  231 (376)
T cd05598         152 RWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG  231 (376)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecc
Confidence                                                                     28999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCC---CHHH
Q 040682           87 VLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRP---TMSD  163 (216)
Q Consensus        87 ~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp---s~~e  163 (216)
                      |++|||++|..||.........     .......   ...  ..+   .....+..+.+++.+|+ .+|.+|+   ++.+
T Consensus       232 vilyell~G~~Pf~~~~~~~~~-----~~i~~~~---~~~--~~~---~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~e  297 (376)
T cd05598         232 VILYEMLVGQPPFLADTPAETQ-----LKVINWE---TTL--HIP---SQAKLSREASDLILRLC-CGAEDRLGKNGADE  297 (376)
T ss_pred             ceeeehhhCCCCCCCCCHHHHH-----HHHhccC---ccc--cCC---CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHH
Confidence            9999999999999654322110     0000000   000  000   00013445677777765 4999999   8888


Q ss_pred             HHHH
Q 040682          164 VVSM  167 (216)
Q Consensus       164 vl~~  167 (216)
                      ++++
T Consensus       298 ll~h  301 (376)
T cd05598         298 IKAH  301 (376)
T ss_pred             HhCC
Confidence            8765

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.90  E-value=1.4e-23  Score=167.73  Aligned_cols=146  Identities=22%  Similarity=0.263  Sum_probs=110.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|..+. .....+++.++..++.|++.||+|||+.+   ++|+||||+||+++.               
T Consensus        72 ~~~v~e~~~g~~L~~~l-~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~  147 (278)
T cd05606          72 LSFILDLMNGGDLHYHL-SQHGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF  147 (278)
T ss_pred             EEEEEecCCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence            5789999    555553 23456999999999999999999999998   999999999999864               


Q ss_pred             ------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 ------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 ------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                  .|++||.+.+. .++.++||||+|+++|++++|..||.............   ...      ...+..
T Consensus       148 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~---~~~------~~~~~~  218 (278)
T cd05606         148 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR---MTL------TMAVEL  218 (278)
T ss_pred             CccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH---Hhh------ccCCCC
Confidence                        28999998754 68899999999999999999999986543222111000   000      001111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVS  166 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~  166 (216)
                      +     ...+..+.+++.+|+..+|.+||     ++.++++
T Consensus       219 ~-----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         219 P-----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             C-----CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            1     11356789999999999999999     8888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=7.2e-24  Score=159.68  Aligned_cols=145  Identities=25%  Similarity=0.309  Sum_probs=114.4

Q ss_pred             eeeeecc-----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK-----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey-----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      -||++||     .+.++.......+++.....++.|+|.||.|+|.++   ||||||||+|+|++.              
T Consensus        97 iyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~  173 (281)
T KOG0580|consen   97 IYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVH  173 (281)
T ss_pred             eEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceee
Confidence            5899999     333333334556899999999999999999999998   999999999999975              


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                   +|.+||+..+...+..+|+|++|+++||++.|.+||........  ...+.       -.....|  
T Consensus       174 ~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~et--YkrI~-------k~~~~~p--  242 (281)
T KOG0580|consen  174 APSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSET--YKRIR-------KVDLKFP--  242 (281)
T ss_pred             cCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHH--HHHHH-------HccccCC--
Confidence                         39999999999999999999999999999999999975442111  11100       0011111  


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                            ...+....+++.+|+..+|.+|....|++.+
T Consensus       243 ------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  243 ------STISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             ------cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence                  1256678999999999999999999998764

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=8e-24  Score=178.29  Aligned_cols=147  Identities=22%  Similarity=0.332  Sum_probs=115.3

Q ss_pred             eeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            4 KLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      ||+.||    -++.+...-.++|++.++..+++|+++||.|||+++   |||||+|..|||++-+               
T Consensus       105 wiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~  181 (1187)
T KOG0579|consen  105 WILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNK  181 (1187)
T ss_pred             EEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccch
Confidence            677888    455555566678999999999999999999999999   9999999999999742               


Q ss_pred             --------------CCChhhhh-----cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           65 --------------YMPPEYAL-----RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        65 --------------y~aPE~~~-----~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                    |||||+..     ..+|+.++||||||+++.||..+.+|+...+.+...     .... ....   
T Consensus       182 ~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVl-----lKia-KSeP---  252 (1187)
T KOG0579|consen  182 STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL-----LKIA-KSEP---  252 (1187)
T ss_pred             hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHH-----HHHh-hcCC---
Confidence                          99999764     558999999999999999999999997655443321     0000 0101   


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        |++   ..+..+...+.+|+.+||..+|..||++.+++++
T Consensus       253 --PTL---lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  253 --PTL---LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             --Ccc---cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence              111   1222378889999999999999999999998864

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.90  E-value=3.8e-23  Score=162.22  Aligned_cols=147  Identities=24%  Similarity=0.371  Sum_probs=113.6

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      +.++|+||    +|.++.... ..+++.++..++.+++.||+|||+.+   ++|+|++|+||+++.+             
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~  150 (260)
T cd06606          75 TLNIFLEYVSGGSLSSLLKKF-GKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKR  150 (260)
T ss_pred             eEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEe
Confidence            46899999    676664333 37999999999999999999999988   9999999999999862             


Q ss_pred             ------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 ------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 ------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                        |.+||...+...+.++|||+||++++++++|..||.....    .....+........    
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~----  222 (260)
T cd06606         151 LGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN----PMAALYKIGSSGEP----  222 (260)
T ss_pred             cccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHHHHHhccccCCC----
Confidence                              7899999888899999999999999999999999865441    11111111100000    


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       +     ..+......+.+++.+|++.+|++||++.+++.
T Consensus       223 -~-----~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         223 -P-----EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             -c-----CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence             1     111113567899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.90  E-value=1.4e-23  Score=173.87  Aligned_cols=96  Identities=29%  Similarity=0.350  Sum_probs=84.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++. ...+.+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        76 ~~lv~E~~~gg~L~~~l-~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~  151 (363)
T cd05628          76 LYLIMEFLPGGDMMTLL-MKKDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGL  151 (363)
T ss_pred             EEEEEcCCCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccc
Confidence            5899999    455553 33457999999999999999999999998   999999999999842               


Q ss_pred             -------------------------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh
Q 040682           64 -------------------------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS   94 (216)
Q Consensus        64 -------------------------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~   94 (216)
                                                                       .|+|||++.+..++.++|||||||++|||++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~  231 (363)
T cd05628         152 KKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI  231 (363)
T ss_pred             cccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHh
Confidence                                                             2789999999999999999999999999999


Q ss_pred             CCCCCCcC
Q 040682           95 GKKSTAVY  102 (216)
Q Consensus        95 g~~~~~~~  102 (216)
                      |..||...
T Consensus       232 G~~Pf~~~  239 (363)
T cd05628         232 GYPPFCSE  239 (363)
T ss_pred             CCCCCCCC
Confidence            99998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=1.6e-23  Score=167.63  Aligned_cols=150  Identities=23%  Similarity=0.360  Sum_probs=109.9

Q ss_pred             ceeeeecc----cccccccCC--CCCCChHHHHHHHHHHHHHHHhhhcC-CCCCeecCCCCCCceeecC-----------
Q 040682            2 CKKLVYSK----LLDAANIDK--KRLLDWQVRARIIEGIAQGLLYLHQY-SRLRIIHRDLKASNILLDS-----------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~-~~~~iiH~dik~~nil~~~-----------   63 (216)
                      ..|+||||    +|+.+....  ...+++..+..++.+++.||.|||++ +   ++|+||||+||+++.           
T Consensus        73 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~  149 (286)
T cd06622          73 AVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGV  149 (286)
T ss_pred             eEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCC
Confidence            36899999    565553322  34789999999999999999999974 6   999999999999975           


Q ss_pred             ----------------CCCChhhhhcCC------CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           64 ----------------GYMPPEYALRGF------FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~------~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                      .|++||.+.+..      ++.++|+|||||++|++++|..||.......  ......       
T Consensus       150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~~-------  220 (286)
T cd06622         150 SGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--IFAQLS-------  220 (286)
T ss_pred             cccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--HHHHHH-------
Confidence                            289999886543      4789999999999999999999985432111  110000       


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        .......  ...+......+.+++.+||+.+|++||++.+++..
T Consensus       221 --~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         221 --AIVDGDP--PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             --HHhhcCC--CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence              0000000  01111256678899999999999999999998863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.89  E-value=2.5e-23  Score=164.52  Aligned_cols=147  Identities=24%  Similarity=0.316  Sum_probs=110.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++... ...++..++..++.|++.||+|||+++   ++|+||+|+||+++.               
T Consensus        68 ~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~  143 (262)
T cd05572          68 IYMLMEYCLGGELWTILRD-RGLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKL  143 (262)
T ss_pred             cEEEEecCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCccccc
Confidence            5899999    66665333 345899999999999999999999998   999999999999864               


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                   .|++||.+.+..++.++|+|+||+++|++++|..||...........   .......     ...  
T Consensus       144 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~~-----~~~--  213 (262)
T cd05572         144 KSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIY---NDILKGN-----GKL--  213 (262)
T ss_pred             CcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHH---HHHhccC-----CCC--
Confidence                         28999998888899999999999999999999999865442111110   0000000     001  


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPT-----MSDVVS  166 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~  166 (216)
                         ..+......+.+++.+||+.+|++||+     ++|+++
T Consensus       214 ---~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         214 ---EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             ---CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence               111113567899999999999999999     677665

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.89  E-value=2.3e-23  Score=167.91  Aligned_cols=158  Identities=22%  Similarity=0.244  Sum_probs=110.3

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .++|+||   .+..........+++.++..++.|++.||+|||+.+   ++|+||||+||+++.+               
T Consensus        91 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~  167 (302)
T cd07864          91 FYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLADFGLARLYN  167 (302)
T ss_pred             EEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeCccccccccc
Confidence            5799999   444444444557999999999999999999999998   9999999999998751               


Q ss_pred             ---------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccC---ccccc
Q 040682           65 ---------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDD---RVHEL  125 (216)
Q Consensus        65 ---------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  125 (216)
                                     |++||.+.+. .++.++|||||||+++++++|++||.......  ............   .....
T Consensus       168 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  245 (302)
T cd07864         168 SEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA--QLELISRLCGSPCPAVWPDV  245 (302)
T ss_pred             CCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCChhhcccc
Confidence                           8899988654 57889999999999999999999886432211  111111100000   00000


Q ss_pred             --------cccccc-----cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          126 --------IDPVIT-----QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       126 --------~~~~~~-----~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                              .+....     ..... ..+..+.+++.+||+.+|++||++.+++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         246 IKLPYFNTMKPKKQYRRRLREEFS-FIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             cccccccccccccccccchhhhcC-CCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                    000000     00001 13567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.89  E-value=1.5e-23  Score=171.87  Aligned_cols=162  Identities=20%  Similarity=0.251  Sum_probs=112.2

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+|+||   ++....  ..+.+++..+..++.|++.||+|||+.+   ++||||||+||+++.                
T Consensus        83 ~~lv~e~~~~~l~~~~--~~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~  157 (336)
T cd07849          83 VYIVQELMETDLYKLI--KTQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIAD  157 (336)
T ss_pred             EEEEehhcccCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeecc
Confidence            5899999   444332  3346999999999999999999999998   999999999999864                


Q ss_pred             ----------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc---Cccc
Q 040682           64 ----------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD---DRVH  123 (216)
Q Consensus        64 ----------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  123 (216)
                                      .|+|||.+.+ ..++.++||||||+++|+|++|+.||...+....  ..........   +...
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~  235 (336)
T cd07849         158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQ--LNLILGVLGTPSQEDLN  235 (336)
T ss_pred             ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHcCCCCHHHHH
Confidence                            1899998765 4688999999999999999999999865332110  0000000000   0000


Q ss_pred             --------ccc-----ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hccc
Q 040682          124 --------ELI-----DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM--ISNE  171 (216)
Q Consensus       124 --------~~~-----~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--L~~~  171 (216)
                              ..+     .+.............++.+++.+||+.+|++||++.|++++  ++..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             HhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence                    000     00000000011135678999999999999999999999876  5543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=2.7e-23  Score=178.89  Aligned_cols=161  Identities=18%  Similarity=0.207  Sum_probs=104.1

Q ss_pred             eeeeecc---ccccccc----CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK---LLDAANI----DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .|+|+|+   .+..+..    .........++..++.|++.||+|||+++   |+||||||+|||++.            
T Consensus       238 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~~~~~vkL~DFGla  314 (501)
T PHA03210        238 TYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLNCDGKIVLGDFGTA  314 (501)
T ss_pred             eEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEeCCCc
Confidence            4678887   3332211    11223446778889999999999999998   999999999999975            


Q ss_pred             ------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCc-cchhhhh-----------
Q 040682           64 ------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGS-FNLLGHA-----------  113 (216)
Q Consensus        64 ------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~-~~~~~~~-----------  113 (216)
                                        .|++||++.+..++.++|||||||++|||++|..++....... .......           
T Consensus       315 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (501)
T PHA03210        315 MPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEF  394 (501)
T ss_pred             eecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhc
Confidence                              2889999999999999999999999999999875433222111 1111000           


Q ss_pred             -------hhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          114 -------WDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       114 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                             +.......+.... ..+............+.+++.+|++.||.+||++.|++++
T Consensus       395 p~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        395 PDPPCKLFDYIDSAEIDHAG-HSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             CCcHHHHHHHhhhhhcccCc-cchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence                   1111000000000 0000000000123457788999999999999999999864

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.89  E-value=4.1e-23  Score=163.01  Aligned_cols=148  Identities=27%  Similarity=0.353  Sum_probs=114.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++.... ..++...+..++.|+++||+|||+ .+   ++|+|++|+||+++.              
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~  149 (264)
T cd06623          74 ISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKV  149 (264)
T ss_pred             EEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCcccee
Confidence            5899999    676663332 678999999999999999999999 88   999999999999975              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|++||.+.+..++.++|+|+||+++|++++|..|+.......  ....... ....     ..+
T Consensus       150 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~-~~~~-----~~~  221 (264)
T cd06623         150 LENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS--FFELMQA-ICDG-----PPP  221 (264)
T ss_pred             cccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC--HHHHHHH-HhcC-----CCC
Confidence                           2899999988889999999999999999999999986544311  1111110 0000     001


Q ss_pred             ccccchhhHH-HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLS-MLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..     +.. .+..+.+++..||..+|++||++.++++.
T Consensus       222 ~~-----~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         222 SL-----PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             CC-----CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            11     111 45679999999999999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.89  E-value=8.3e-24  Score=177.54  Aligned_cols=147  Identities=20%  Similarity=0.300  Sum_probs=112.7

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      +.-+|.|.    +|..+..+. +.++.+.++.|++||+.||.|||++. ++|||||||..||+++.+             
T Consensus       117 ~in~iTEL~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAt  194 (632)
T KOG0584|consen  117 TINFITELFTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLAT  194 (632)
T ss_pred             eeeeeeecccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHH
Confidence            34578888    777774433 45899999999999999999999985 899999999999999872             


Q ss_pred             ---------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           65 ---------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        65 ---------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                     |||||++. ..|+..+||||||+.+.||+|+..|+..-.     ..+.++.-.-.+.....+   
T Consensus       195 l~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~-----n~AQIYKKV~SGiKP~sl---  265 (632)
T KOG0584|consen  195 LLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT-----NPAQIYKKVTSGIKPAAL---  265 (632)
T ss_pred             HhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC-----CHHHHHHHHHcCCCHHHh---
Confidence                           99999887 789999999999999999999999975322     222222222222111111   


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                            ..--.+++.+|+.+|+.. .++|+|+.|+|.
T Consensus       266 ------~kV~dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  266 ------SKVKDPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             ------hccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence                  111234688999999998 899999999984

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.8e-23  Score=173.21  Aligned_cols=147  Identities=20%  Similarity=0.227  Sum_probs=108.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ....+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        76 ~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  151 (364)
T cd05599          76 LYLIMEYLPGGDMMTLLM-KKDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGL  151 (364)
T ss_pred             EEEEECCCCCcHHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceec
Confidence            6899999    5555533 3346899999999999999999999998   999999999999852               


Q ss_pred             ----------------------------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHH
Q 040682           64 ----------------------------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLE   91 (216)
Q Consensus        64 ----------------------------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~e   91 (216)
                                                                          .|+|||++.+..++.++|||||||++||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e  231 (364)
T cd05599         152 KKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYE  231 (364)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHH
Confidence                                                                2899999998899999999999999999


Q ss_pred             HHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCC---HHHHHHH
Q 040682           92 ILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPT---MSDVVSM  167 (216)
Q Consensus        92 ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps---~~evl~~  167 (216)
                      |++|..||........     ........   ..  ...+.   ....+..+.+++.+|+. +|.+|++   +.|++++
T Consensus       232 l~~G~~Pf~~~~~~~~-----~~~i~~~~---~~--~~~~~---~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         232 MLVGYPPFCSDNPQET-----YRKIINWK---ET--LQFPD---EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             hhcCCCCCCCCCHHHH-----HHHHHcCC---Cc--cCCCC---CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            9999999864332110     00000000   00  00000   00134567888899986 8999998   8777653

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.89  E-value=2.3e-23  Score=164.53  Aligned_cols=147  Identities=27%  Similarity=0.394  Sum_probs=110.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++... ...+++..+..++.+++.||.|||+.+   ++|+||+|.||+++.               
T Consensus        74 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~  149 (264)
T cd06626          74 VYIFMEYCSGGTLEELLEH-GRILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKL  149 (264)
T ss_pred             EEEEEecCCCCcHHHHHhh-cCCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccccccccc
Confidence            5899999    67776433 345899999999999999999999998   999999999999974               


Q ss_pred             ------------------CCCChhhhhcCC---CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcc
Q 040682           64 ------------------GYMPPEYALRGF---FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV  122 (216)
Q Consensus        64 ------------------~y~aPE~~~~~~---~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (216)
                                        .|++||.+.+..   .+.++|||+||+++|++++|..||........    .......    
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~----~~~~~~~----  221 (264)
T cd06626         150 KNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ----IMFHVGA----  221 (264)
T ss_pred             CCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH----HHHHHhc----
Confidence                              278999988765   88999999999999999999999864432111    1110000    


Q ss_pred             ccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          123 HELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                        ...+..+.   .......+.+++.+||+.+|++||++.+++.
T Consensus       222 --~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         222 --GHKPPIPD---SLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             --CCCCCCCc---ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence              00111111   1113566789999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.89  E-value=3.1e-23  Score=165.70  Aligned_cols=158  Identities=20%  Similarity=0.279  Sum_probs=111.1

Q ss_pred             eeeeecc---ccccccc--CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK---LLDAANI--DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||   +|.++..  .....+++.++..++.|++.||+|||+.+   ++|+||||+||+++.              
T Consensus        73 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~  149 (284)
T cd07836          73 LMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARA  149 (284)
T ss_pred             EEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhh
Confidence            5899999   5555422  22356899999999999999999999998   999999999999974              


Q ss_pred             ---------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-c-hh-------hhhhhhhc
Q 040682           64 ---------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-N-LL-------GHAWDLWK  118 (216)
Q Consensus        64 ---------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~-~~-------~~~~~~~~  118 (216)
                                     .|++||.+.+. .++.++|||+||+++|++++|..||........ . ..       ...+..+.
T Consensus       150 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
T cd07836         150 FGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS  229 (284)
T ss_pred             hcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh
Confidence                           28999988764 578899999999999999999999865432211 0 00       00011111


Q ss_pred             cCcccccccccccc------chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          119 DDRVHELIDPVITQ------DEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       119 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .  ... +....+.      ..........+.+++.+||+.+|++||++.++++
T Consensus       230 ~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         230 Q--LPE-YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             c--Cch-hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0  000 0000000      0111124567889999999999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.8e-23  Score=174.11  Aligned_cols=148  Identities=20%  Similarity=0.230  Sum_probs=107.6

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ..|+||||    +|.++.. ..+.+++..+..++.|++.||+|||+.+   |+||||||+|||++.              
T Consensus        75 ~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~  150 (377)
T cd05629          75 YLYLIMEFLPGGDLMTMLI-KYDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTG  150 (377)
T ss_pred             eeEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeecccccc
Confidence            36899999    5555533 3456899999999999999999999998   999999999999742              


Q ss_pred             --------------------------------------------------------------CCCChhhhhcCCCCcchh
Q 040682           64 --------------------------------------------------------------GYMPPEYALRGFFSIKSD   81 (216)
Q Consensus        64 --------------------------------------------------------------~y~aPE~~~~~~~~~~~D   81 (216)
                                                                                    .|+|||++.+..++.++|
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  230 (377)
T cd05629         151 FHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECD  230 (377)
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCcee
Confidence                                                                          289999999889999999


Q ss_pred             hhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCC---
Q 040682           82 VFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADR---  158 (216)
Q Consensus        82 v~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R---  158 (216)
                      ||||||++|||++|..||........  ....   ......     ...+.   .......+.+++.+|+. +|.+|   
T Consensus       231 iwSlGvil~elltG~~Pf~~~~~~~~--~~~i---~~~~~~-----~~~p~---~~~~s~~~~dli~~lL~-~~~~r~~r  296 (377)
T cd05629         231 WWSLGAIMFECLIGWPPFCSENSHET--YRKI---INWRET-----LYFPD---DIHLSVEAEDLIRRLIT-NAENRLGR  296 (377)
T ss_pred             eEecchhhhhhhcCCCCCCCCCHHHH--HHHH---HccCCc-----cCCCC---CCCCCHHHHHHHHHHhc-CHhhcCCC
Confidence            99999999999999999864332110  0000   000000     00000   00134568889999997 66665   


Q ss_pred             CCHHHHHHH
Q 040682          159 PTMSDVVSM  167 (216)
Q Consensus       159 ps~~evl~~  167 (216)
                      +++.|++.+
T Consensus       297 ~~~~~~l~h  305 (377)
T cd05629         297 GGAHEIKSH  305 (377)
T ss_pred             CCHHHHhcC
Confidence            588888765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.89  E-value=2.5e-23  Score=171.10  Aligned_cols=158  Identities=18%  Similarity=0.179  Sum_probs=108.5

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   +|.++.  ....+++..++.++.|+++||.|||+.+   ++||||||+||+++.                
T Consensus        91 ~~lv~e~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl~dfg~~~~~  165 (342)
T cd07854          91 VYIVQEYMETDLANVL--EQGPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIGDFGLARIV  165 (342)
T ss_pred             EEEEeecccccHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEECCcccceec
Confidence            5899999   444442  2346899999999999999999999998   999999999999962                


Q ss_pred             -----------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh----------
Q 040682           64 -----------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD----------  115 (216)
Q Consensus        64 -----------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~----------  115 (216)
                                       .|+|||.+.+ ..++.++|||||||++|++++|+.||........ .......          
T Consensus       166 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~  244 (342)
T cd07854         166 DPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-MQLILESVPVVREEDRN  244 (342)
T ss_pred             CCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCChHHhh
Confidence                             1889998765 4688899999999999999999999864432111 0000000          


Q ss_pred             hhccC---ccc-cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          116 LWKDD---RVH-ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       116 ~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .....   ... ....+..+..........++.+++.+||+.+|.+||++.+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         245 ELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             hhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            00000   000 0000000000011113457889999999999999999999984

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.89  E-value=4.4e-23  Score=164.59  Aligned_cols=148  Identities=22%  Similarity=0.228  Sum_probs=110.0

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++... ....+++.++..++.|++.||.|||+.+   ++|+||+|+||+++.              
T Consensus        68 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~  144 (277)
T cd05577          68 LCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVE  144 (277)
T ss_pred             EEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhh
Confidence            5899999    56655332 3346899999999999999999999998   999999999999975              


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|++||.+.+..++.++||||||++++++++|+.||.........  ..    ........     
T Consensus       145 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~----~~~~~~~~-----  213 (277)
T cd05577         145 LKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK--EE----LKRRTLEM-----  213 (277)
T ss_pred             hccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH--HH----HHhccccc-----
Confidence                          289999998888999999999999999999999998644331110  00    00000000     


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~  166 (216)
                        ....+......+.+++.+||+.+|++||     ++.+++.
T Consensus       214 --~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         214 --AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             --cccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence              0011111455789999999999999999     5555653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.89  E-value=3.9e-23  Score=166.14  Aligned_cols=160  Identities=19%  Similarity=0.209  Sum_probs=109.4

Q ss_pred             ceeeeecc---cccccc-cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            2 CKKLVYSK---LLDAAN-IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ..|+||||   ++.... ......+++..+..++.|++.||+|||+++   ++|+||+|+||+++.              
T Consensus        75 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~  151 (294)
T PLN00009         75 RLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLAR  151 (294)
T ss_pred             eEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEccccccc
Confidence            36899999   444442 233334688889999999999999999998   999999999999963              


Q ss_pred             ----------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhh----------hhhh
Q 040682           64 ----------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGH----------AWDL  116 (216)
Q Consensus        64 ----------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~----------~~~~  116 (216)
                                      .|++||.+.+. .++.++||||||+++|++++|..||........ ....          .|..
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~  230 (294)
T PLN00009        152 AFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE-LFKIFRILGTPNEETWPG  230 (294)
T ss_pred             ccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChhhccc
Confidence                            18999988764 578999999999999999999999865332111 0000          0000


Q ss_pred             hccC-ccccccccccccc---hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          117 WKDD-RVHELIDPVITQD---EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       117 ~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .... ..... .+.....   .........+.+++.+|++.+|++||++.++++
T Consensus       231 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        231 VTSLPDYKSA-FPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             cccchhhhhh-cccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0000 00000 0000000   001113456899999999999999999999985

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.89  E-value=2.2e-23  Score=165.16  Aligned_cols=145  Identities=21%  Similarity=0.298  Sum_probs=109.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++... ...+++..+..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        81 ~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~  156 (265)
T cd06652          81 LSIFMEHMPGGSIKDQLKS-YGALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRL  156 (265)
T ss_pred             EEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccccc
Confidence            5789999    66666332 245889999999999999999999998   999999999999975               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||.+.+..++.++||||||+++|++++|+.||.......     ........     ..
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~-----~~  226 (265)
T cd06652         157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA-----AIFKIATQ-----PT  226 (265)
T ss_pred             ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH-----HHHHHhcC-----CC
Confidence                             2899999988889999999999999999999999985332111     00000000     00


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .+     ..+......+.+++.+||. +|++||++.+|++.
T Consensus       227 ~~-----~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         227 NP-----VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             CC-----CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence            11     1122245678889999995 89999999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.89  E-value=4.5e-23  Score=167.15  Aligned_cols=162  Identities=17%  Similarity=0.189  Sum_probs=110.8

Q ss_pred             eeeeecc---cccccc---c-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK---LLDAAN---I-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~---~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .|+||||   ++.++.   . .....++...++.++.|++.||+|||+.+   ++||||||+||+++.            
T Consensus        79 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~D  155 (316)
T cd07842          79 VYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGD  155 (316)
T ss_pred             EEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECC
Confidence            5899999   344331   1 22236899999999999999999999998   999999999999975            


Q ss_pred             ------------------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc-------hhh
Q 040682           64 ------------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN-------LLG  111 (216)
Q Consensus        64 ------------------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~-------~~~  111 (216)
                                              .|+|||.+.+. .++.++||||||+++++|++|..||.........       ...
T Consensus       156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (316)
T cd07842         156 LGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE  235 (316)
T ss_pred             CccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence                                    18999988764 5789999999999999999999998765543310       000


Q ss_pred             hhhhhhcc------------Ccccc---cc-ccccccch----hhH--HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          112 HAWDLWKD------------DRVHE---LI-DPVITQDE----ISL--SMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       112 ~~~~~~~~------------~~~~~---~~-~~~~~~~~----~~~--~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .....+..            .....   .. ........    .+.  ....++.+++.+||+.+|++|||+.|++++
T Consensus       236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~  313 (316)
T cd07842         236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH  313 (316)
T ss_pred             HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            00000000            00000   00 00000000    000  134568999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.89  E-value=6.9e-23  Score=163.34  Aligned_cols=160  Identities=21%  Similarity=0.261  Sum_probs=113.5

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      ..++||||   +|.++.......+++.++..++.+++.||+|||+++   ++|+||+|+||+++.+              
T Consensus        72 ~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~  148 (282)
T cd07829          72 KLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAF  148 (282)
T ss_pred             ceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCccccc
Confidence            36899999   666664444357999999999999999999999998   9999999999999751              


Q ss_pred             ---------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc--c-------hhhhhhhhhcc
Q 040682           65 ---------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF--N-------LLGHAWDLWKD  119 (216)
Q Consensus        65 ---------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~--~-------~~~~~~~~~~~  119 (216)
                                     |+|||.+.+. .++.++|||+||++++|+++|..||........  .       .....|..+..
T Consensus       149 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (282)
T cd07829         149 GIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTK  228 (282)
T ss_pred             CCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcc
Confidence                           8999998776 788999999999999999999988855332110  0       00001111111


Q ss_pred             Cc-ccccccccccc----chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          120 DR-VHELIDPVITQ----DEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       120 ~~-~~~~~~~~~~~----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .. ....+ +....    ...+. ....+.+++..||+.+|++||++.+++.
T Consensus       229 ~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         229 LPDYKPTF-PKFPPKDLEKVLPR-LDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             cccccccc-cccCccchHHhccc-ccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            00 00000 00000    01111 2567999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.89  E-value=4e-23  Score=169.21  Aligned_cols=150  Identities=18%  Similarity=0.162  Sum_probs=107.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++..+..++.|++.||+|||+.+   |+||||||+|||++.               
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~  152 (332)
T cd05623          76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKL  152 (332)
T ss_pred             EEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheec
Confidence            5899999    666665554567899999999999999999999998   999999999999964               


Q ss_pred             ---------------CCCChhhhhc-----CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 ---------------GYMPPEYALR-----GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 ---------------~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                     .|+|||++.+     ..++.++|||||||++|||++|+.||.......     ..........  
T Consensus       153 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~-----~~~~i~~~~~--  225 (332)
T cd05623         153 MEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-----TYGKIMNHKE--  225 (332)
T ss_pred             ccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH-----HHHHHhCCCc--
Confidence                           2999999863     357889999999999999999999986432111     1111111000  


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCC--CCCCHHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVA--DRPTMSDVVSM  167 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~--~Rps~~evl~~  167 (216)
                         ....+.  .....+..+.+++.+|+..+++  .|+++.+++++
T Consensus       226 ---~~~~p~--~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         226 ---RFQFPA--QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             ---cccCCC--ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence               000000  0111455678888887755443  46889888766

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.89  E-value=1.1e-23  Score=163.12  Aligned_cols=136  Identities=22%  Similarity=0.226  Sum_probs=105.9

Q ss_pred             eeeeecc--ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK--LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey--~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      -||||||  ..+-. ..++.+.+++..++.++.||+.||+|||+.+   |++||+||+|||++.                
T Consensus       119 lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~  195 (355)
T KOG0616|consen  119 LYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVS  195 (355)
T ss_pred             EEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEec
Confidence            4899999  22222 3455567999999999999999999999999   999999999999987                


Q ss_pred             ----------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccc
Q 040682           64 ----------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQD  133 (216)
Q Consensus        64 ----------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (216)
                                .|+|||++.+..+..++|-|+||+++|||+.|.+||........      ++-+        +...   .
T Consensus       196 ~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~i------Y~KI--------~~~~---v  258 (355)
T KOG0616|consen  196 GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQI------YEKI--------LEGK---V  258 (355)
T ss_pred             CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHH------HHHH--------HhCc---c
Confidence                      29999999999999999999999999999999999975544211      1111        1111   1


Q ss_pred             hhhHHHHHHHHHHHHhccccCCCCC
Q 040682          134 EISLSMLMRYVKVALLCVQETVADR  158 (216)
Q Consensus       134 ~~~~~~~~~~~~l~~~cl~~~p~~R  158 (216)
                      ..+.....++.+|+..-++.|-.+|
T Consensus       259 ~fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  259 KFPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             cCCcccCHHHHHHHHHHHhhhhHhh
Confidence            1222255667888888888888888

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.89  E-value=1.6e-23  Score=183.42  Aligned_cols=151  Identities=26%  Similarity=0.353  Sum_probs=117.6

Q ss_pred             eeeeecc----cccccccCCC---------------CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDKK---------------RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .++|.||    +|..+++..+               ..++......++.|||.|++||++..   ++|||+..+|||+..
T Consensus       377 ~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi~~  453 (609)
T KOG0200|consen  377 LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLITK  453 (609)
T ss_pred             eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEecC
Confidence            4789999    4444434433               34899999999999999999999988   999999999999986


Q ss_pred             C--------------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchh
Q 040682           64 G--------------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLL  110 (216)
Q Consensus        64 ~--------------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~  110 (216)
                      +                                |+|||.+....|+.++||||||+++||+++ |..|+.+-.. ...+ 
T Consensus       454 ~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-~~~l-  531 (609)
T KOG0200|consen  454 NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-TEEL-  531 (609)
T ss_pred             CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-HHHH-
Confidence            2                                999999999999999999999999999998 7778754110 0011 


Q ss_pred             hhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          111 GHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                         +..++.+..          ...+..|..+++++|..||+.+|++||++.++.+.|+..
T Consensus       532 ---~~~l~~G~r----------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  532 ---LEFLKEGNR----------MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             ---HHHHhcCCC----------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence               112222211          112223677899999999999999999999999999984

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.89  E-value=2.1e-23  Score=164.13  Aligned_cols=145  Identities=23%  Similarity=0.342  Sum_probs=110.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++... ...+++.++..++.|++.||+|||+.+   ++|+||+|+||+++.               
T Consensus        77 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~  152 (258)
T cd06632          77 LYIFLELVPGGSLAKLLKK-YGSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQV  152 (258)
T ss_pred             EEEEEEecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceec
Confidence            5799999    66666433 345899999999999999999999998   999999999999864               


Q ss_pred             -------------CCCChhhhhcCC-CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 -------------GYMPPEYALRGF-FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 -------------~y~aPE~~~~~~-~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                   .|++||.+.... ++.++|+||||+++|++++|..||......     ............     +.
T Consensus       153 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~-----~~  222 (258)
T cd06632         153 VEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV-----AAVFKIGRSKEL-----PP  222 (258)
T ss_pred             cccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH-----HHHHHHHhcccC-----CC
Confidence                         188999987766 899999999999999999999998543311     111110000000     11


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .     +......+.+++.+||+.+|++||++.+++.
T Consensus       223 ~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         223 I-----PDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             c-----CCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            1     1114567889999999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.89  E-value=2.1e-23  Score=170.40  Aligned_cols=163  Identities=20%  Similarity=0.236  Sum_probs=115.1

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .|+||||   +|.++.. ....+++..+..++.|++.||+|||+.+   ++|+||||.||+++.+               
T Consensus        79 ~~lv~e~~~~~l~~~l~-~~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~  154 (330)
T cd07834          79 VYIVTELMETDLHKVIK-SPQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVD  154 (330)
T ss_pred             eEEEecchhhhHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence            5899999   5555533 3347999999999999999999999998   9999999999999751               


Q ss_pred             -----------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhh----------
Q 040682           65 -----------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDL----------  116 (216)
Q Consensus        65 -----------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~----------  116 (216)
                                       |++||.+.+. .++.++|+||||+++|++++|..||........  .......          
T Consensus       155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~  232 (330)
T cd07834         155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ--LNLIVEVLGTPSEEDLK  232 (330)
T ss_pred             ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH--HHHHHHhcCCCChhHhh
Confidence                             7999999887 789999999999999999999999865542211  0000000          


Q ss_pred             -hccCcccccccccc-----ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hccc
Q 040682          117 -WKDDRVHELIDPVI-----TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM--ISNE  171 (216)
Q Consensus       117 -~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--L~~~  171 (216)
                       .........+....     ............+.+++.+||+.+|++||++.+++.+  +++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence             00000000000000     0000011135678999999999999999999999864  5543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.89  E-value=5.3e-23  Score=164.25  Aligned_cols=161  Identities=21%  Similarity=0.229  Sum_probs=111.0

Q ss_pred             eeeeecc---cccccccCC-CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK---LLDAANIDK-KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||   +|.+..... ...+++.++..++.|++.||.|||+++   ++|+|++|.||+++.+              
T Consensus        73 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~  149 (283)
T cd07830          73 LYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREI  149 (283)
T ss_pred             EEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceec
Confidence            5899999   555553332 357899999999999999999999998   9999999999999862              


Q ss_pred             --------------CCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccch---------hhhhhhhh--c
Q 040682           65 --------------YMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNL---------LGHAWDLW--K  118 (216)
Q Consensus        65 --------------y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~---------~~~~~~~~--~  118 (216)
                                    |++||.+.+ ..++.++|+||||++++++++|..||..........         ....|...  .
T Consensus       150 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (283)
T cd07830         150 RSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL  229 (283)
T ss_pred             cCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence                          789998754 357899999999999999999999886543221100         00000000  0


Q ss_pred             cCccccccccccc---cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          119 DDRVHELIDPVIT---QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       119 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .......+.....   ....+. ....+.+++.+||+.+|++||+++|++..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         230 ASKLGFRFPQFAPTSLHQLIPN-ASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             hccccccccccccccHHHHccc-CCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            0000000000000   000111 24678999999999999999999998753

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.89  E-value=4.3e-23  Score=162.95  Aligned_cols=146  Identities=22%  Similarity=0.285  Sum_probs=111.8

Q ss_pred             eeeeecc----ccccccc---CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANI---DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++||||    +|+++..   .....+++.+++.++.|++.||.|||+.+   ++|+|+||+||+++.            
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~~~~~l~d~g~~~  153 (260)
T cd08222          77 FCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKNNLLKIGDFGVSR  153 (260)
T ss_pred             eEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeecCCEeecccCcee
Confidence            5799999    6665522   33457999999999999999999999998   999999999999874            


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|++||...+..++.++|+||||+++|++++|..||.....     ........ ..     ..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~-----~~~~~~~~-~~-----~~  222 (260)
T cd08222         154 LLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF-----LSVVLRIV-EG-----PT  222 (260)
T ss_pred             ecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHH-cC-----CC
Confidence                            28899998888889999999999999999999999753221     11110000 00     01


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      +..     +......+.+++.+||+.+|++||++.++++.
T Consensus       223 ~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         223 PSL-----PETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             CCC-----cchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence            111     12255678999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.89  E-value=7.3e-23  Score=167.06  Aligned_cols=172  Identities=22%  Similarity=0.215  Sum_probs=122.0

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCC------CCCeecCCCCCCceeecCC-------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYS------RLRIIHRDLKASNILLDSG-------   64 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~iiH~dik~~nil~~~~-------   64 (216)
                      ..|||+||    +|.+++..  ..++|....+++..++.||+|||+.-      .++|+|||||.+|||+..+       
T Consensus       282 eywLVt~fh~kGsL~dyL~~--ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD  359 (534)
T KOG3653|consen  282 EYWLVTEFHPKGSLCDYLKA--NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD  359 (534)
T ss_pred             ceeEEeeeccCCcHHHHHHh--ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence            46899999    77777443  46999999999999999999999733      6789999999999999652       


Q ss_pred             ------------------------CCChhhhhcC-CCC-----cchhhhhHHHHHHHHHhCCCCCCc--CCCCccchhhh
Q 040682           65 ------------------------YMPPEYALRG-FFS-----IKSDVFSFGVLMLEILSGKKSTAV--YNTGSFNLLGH  112 (216)
Q Consensus        65 ------------------------y~aPE~~~~~-~~~-----~~~Dv~s~G~~l~ell~g~~~~~~--~~~~~~~~~~~  112 (216)
                                              |||||++.+. .+.     .+.||||+|.++||++++...+..  ..+.+..+-+.
T Consensus       360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e  439 (534)
T KOG3653|consen  360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE  439 (534)
T ss_pred             cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence                                    9999999876 233     578999999999999997665431  11111111111


Q ss_pred             hhhhhccC-----ccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          113 AWDLWKDD-----RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       113 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      +-....-+     .+.+..+|.++..........-+.+++..||+.||+.|.|+.=|.+.+..+....
T Consensus       440 vG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~  507 (534)
T KOG3653|consen  440 VGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW  507 (534)
T ss_pred             hcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence            11111111     1222234444443333335667899999999999999999988888888764433

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.89  E-value=5.9e-23  Score=168.41  Aligned_cols=158  Identities=25%  Similarity=0.262  Sum_probs=109.6

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   +|..+...  +.+++..+..++.|++.||+|||+.+   ++|+||||+||+++.                
T Consensus        84 ~~lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~~  158 (337)
T cd07852          84 IYLVFEYMETDLHAVIRA--NILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSLS  158 (337)
T ss_pred             EEEEecccccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence            5899999   55544322  27899999999999999999999998   999999999999965                


Q ss_pred             ------------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhh--------
Q 040682           64 ------------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDL--------  116 (216)
Q Consensus        64 ------------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~--------  116 (216)
                                        .|++||.+.+ ..++.++||||||+++|++++|+.||........  .......        
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~--~~~~~~~~~~~~~~~  236 (337)
T cd07852         159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ--LEKIIEVIGPPSAED  236 (337)
T ss_pred             cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCCHHH
Confidence                              1788998765 3578899999999999999999999864332111  0000000        


Q ss_pred             ---hccCccccccc----ccc-ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          117 ---WKDDRVHELID----PVI-TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       117 ---~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                         +........++    ... .........+..+.+++..||+.+|++||++.++++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence               00000000000    000 0001111135678999999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.89  E-value=1.5e-23  Score=174.81  Aligned_cols=146  Identities=18%  Similarity=0.240  Sum_probs=104.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++..+..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        76 ~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~  151 (382)
T cd05625          76 LYFVMDYIPGGDMMSLLI-RMGIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (382)
T ss_pred             EEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccc
Confidence            5899999    4555533 3356899999999999999999999998   999999999999742               


Q ss_pred             -------------------------------------------------------------CCCChhhhhcCCCCcchhh
Q 040682           64 -------------------------------------------------------------GYMPPEYALRGFFSIKSDV   82 (216)
Q Consensus        64 -------------------------------------------------------------~y~aPE~~~~~~~~~~~Dv   82 (216)
                                                                                   .|+|||++.+..++.++||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Di  231 (382)
T cd05625         152 RWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW  231 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeE
Confidence                                                                         2899999999999999999


Q ss_pred             hhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCC--
Q 040682           83 FSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPT--  160 (216)
Q Consensus        83 ~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps--  160 (216)
                      ||+||++|||++|..||........     ........       ....... ......++.+++.+++ .+|.+|++  
T Consensus       232 wSlGvil~elltG~~Pf~~~~~~~~-----~~~i~~~~-------~~~~~p~-~~~~s~~~~~li~~l~-~~p~~R~~~~  297 (382)
T cd05625         232 WSVGVILYEMLVGQPPFLAQTPLET-----QMKVINWQ-------TSLHIPP-QAKLSPEASDLIIKLC-RGPEDRLGKN  297 (382)
T ss_pred             EechHHHHHHHhCCCCCCCCCHHHH-----HHHHHccC-------CCcCCCC-cccCCHHHHHHHHHHc-cCHhHcCCCC
Confidence            9999999999999999965432111     00000000       0000000 0113345666666654 48999987  


Q ss_pred             -HHHHHH
Q 040682          161 -MSDVVS  166 (216)
Q Consensus       161 -~~evl~  166 (216)
                       +.+++.
T Consensus       298 ~~~ei~~  304 (382)
T cd05625         298 GADEIKA  304 (382)
T ss_pred             CHHHHhc
Confidence             777664

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.89  E-value=5.9e-23  Score=161.39  Aligned_cols=147  Identities=27%  Similarity=0.287  Sum_probs=113.5

Q ss_pred             ceeeeecc----cccccccC---CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----------
Q 040682            2 CKKLVYSK----LLDAANID---KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----------   63 (216)
                      ..|+||||    +|..+...   ....+++..+..++.|++.||+|||+.+   ++|+||+|.||+++.           
T Consensus        73 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~  149 (256)
T cd08530          73 KLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGI  149 (256)
T ss_pred             EEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccc
Confidence            36899999    56665222   2356899999999999999999999998   999999999999875           


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|.+||.+.+..++.++|+||||++++++++|..||........      .........     
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~------~~~~~~~~~-----  218 (256)
T cd08530         150 SKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL------RYKVQRGKY-----  218 (256)
T ss_pred             hhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHhcCCC-----
Confidence                            28999999888899999999999999999999999854332110      000111111     


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      +     ..+.....++.+++.+||+.+|++||++.++++.
T Consensus       219 ~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         219 P-----PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             C-----CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            1     1111256679999999999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.89  E-value=2.7e-23  Score=163.88  Aligned_cols=149  Identities=24%  Similarity=0.269  Sum_probs=112.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++... .+.+++..+..++.|+++||+|||+.+   ++|+||+|+||+++.               
T Consensus        68 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~  143 (265)
T cd05579          68 LYLVMEYLPGGDLASLLEN-VGSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVG  143 (265)
T ss_pred             EEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhc
Confidence            5899999    66666333 236899999999999999999999998   999999999999864               


Q ss_pred             ----------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           64 ----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        64 ----------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                            .|++||...+...+.++||||||++++++++|..||.......     . ........
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----~-~~~~~~~~  217 (265)
T cd05579         144 LVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE-----I-FQNILNGK  217 (265)
T ss_pred             ccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-----H-HHHHhcCC
Confidence                                  2789999988888999999999999999999999985433111     0 00010100


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      .    .. .  ...  .....+.+++.+||+.+|++||++.++.+.|+.
T Consensus       218 ~----~~-~--~~~--~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~  257 (265)
T cd05579         218 I----EW-P--EDV--EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH  257 (265)
T ss_pred             c----CC-C--ccc--cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence            0    00 0  000  025678999999999999999999777777764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.89  E-value=3.6e-23  Score=166.61  Aligned_cols=145  Identities=19%  Similarity=0.260  Sum_probs=110.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.  ..+.+++..+..++.|++.||+|||+.+   ++|+|++|+||+++.               
T Consensus        92 ~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~  166 (292)
T cd06657          92 LWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV  166 (292)
T ss_pred             EEEEEecCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceec
Confidence            6899999    566553  2345899999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|++||.+.+..++.++|+||||+++|++++|..||.......  .......     ..    ...
T Consensus       167 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~--~~~~~~~-----~~----~~~  235 (292)
T cd06657         167 SKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRD-----NL----PPK  235 (292)
T ss_pred             ccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHh-----hC----Ccc
Confidence                          1899999988888999999999999999999999986432211  0000000     00    001


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ...  . ......+.+++.+||+.+|.+||++.++++
T Consensus       236 ~~~--~-~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         236 LKN--L-HKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             cCC--c-ccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            000  0 013446788999999999999999999886

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.89  E-value=3.4e-23  Score=170.30  Aligned_cols=162  Identities=23%  Similarity=0.278  Sum_probs=111.6

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+|+||   ++..+.   ...+++.++..++.|++.||+|||+.+   ++||||||+||+++.                
T Consensus        95 ~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~  168 (342)
T cd07879          95 FYLVMPYMQTDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLARHAD  168 (342)
T ss_pred             EEEEecccccCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence            4789999   333332   235899999999999999999999998   999999999999975                


Q ss_pred             ----------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhh-----------hccCc
Q 040682           64 ----------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDL-----------WKDDR  121 (216)
Q Consensus        64 ----------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~  121 (216)
                                .|+|||.+.+ ..++.++|||||||++||+++|+.||........  .......           .....
T Consensus       169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  246 (342)
T cd07879         169 AEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ--LTQILKVTGVPGPEFVQKLEDKA  246 (342)
T ss_pred             CCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCHHHHHHhcccc
Confidence                      1899999876 4688999999999999999999999865332110  0000000           00000


Q ss_pred             cccccc--cccccchhh---HHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hcccc
Q 040682          122 VHELID--PVITQDEIS---LSMLMRYVKVALLCVQETVADRPTMSDVVSM--ISNEH  172 (216)
Q Consensus       122 ~~~~~~--~~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--L~~~~  172 (216)
                      ......  +........   ......+.+++.+||+.+|++||++.+++.+  ++...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence            000000  000000000   0134568899999999999999999999954  66653

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.89  E-value=7.4e-23  Score=170.06  Aligned_cols=147  Identities=16%  Similarity=0.174  Sum_probs=106.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++..  ...+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       118 ~~lv~Ey~~gg~L~~~l~--~~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~  192 (370)
T cd05621         118 LYMVMEYMPGGDLVNLMS--NYDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKM  192 (370)
T ss_pred             EEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceec
Confidence            6899999    5655532  235899999999999999999999998   999999999999965               


Q ss_pred             ---------------CCCChhhhhcCC----CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 ---------------GYMPPEYALRGF----FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~----~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                     .|+|||++.+..    ++.++||||+||++|+|++|..||.......     ...........  
T Consensus       193 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~-----~~~~i~~~~~~--  265 (370)
T cd05621         193 DETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG-----TYSKIMDHKNS--  265 (370)
T ss_pred             ccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH-----HHHHHHhCCcc--
Confidence                           299999997643    7889999999999999999999986433211     10111100000  


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVAD--RPTMSDVVSM  167 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~evl~~  167 (216)
                         ...+   .....+..+.+++..|+..++..  |+++.|++++
T Consensus       266 ---~~~p---~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         266 ---LNFP---EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             ---cCCC---CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence               0000   11113556778888888755543  8899998876

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.88  E-value=1.4e-22  Score=159.16  Aligned_cols=146  Identities=21%  Similarity=0.253  Sum_probs=113.0

Q ss_pred             eeeeecc----cccccccCC---CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANIDK---KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++|+||    +|.+.....   ...+++.++..++.+++.||+|||+.+   ++|+|++|+||+++.            
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~  150 (258)
T cd08215          74 LCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGIS  150 (258)
T ss_pred             EEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccce
Confidence            5789999    566653332   367999999999999999999999998   999999999999986            


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|++||...+..++.++|+|++|++++++++|..|+.......     . .........    
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----~-~~~~~~~~~----  220 (258)
T cd08215         151 KVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE-----L-ALKILKGQY----  220 (258)
T ss_pred             eecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH-----H-HHHHhcCCC----
Confidence                             1899999988889999999999999999999999975433111     0 110101111    


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       +.++     ......+.+++.+||+.+|++||++.++++.
T Consensus       221 -~~~~-----~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         221 -PPIP-----SQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             -CCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence             1111     1245678999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1e-22  Score=166.80  Aligned_cols=150  Identities=20%  Similarity=0.218  Sum_probs=105.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  152 (331)
T cd05597          76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRL  152 (331)
T ss_pred             EEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeec
Confidence            5899999    666664444567899999999999999999999998   999999999999964               


Q ss_pred             ---------------CCCChhhhhc-----CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 ---------------GYMPPEYALR-----GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 ---------------~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                     .|+|||++.+     ..++.++|||||||++|+|++|+.||.......     ............
T Consensus       153 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~-----~~~~i~~~~~~~  227 (331)
T cd05597         153 LADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE-----TYGKIMNHKEHF  227 (331)
T ss_pred             CCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHH-----HHHHHHcCCCcc
Confidence                           2999999873     357789999999999999999999986432111     000001000000


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhcccc--CCCCCCCHHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQE--TVADRPTMSDVVSM  167 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~--~p~~Rps~~evl~~  167 (216)
                      .     .+.. . ...+..+.+++.+|+..  ++..|+++.+++++
T Consensus       228 ~-----~~~~-~-~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         228 Q-----FPPD-V-TDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             c-----CCCc-c-CCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            0     0000 0 11345667777776654  44447888888866

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=4e-23  Score=175.04  Aligned_cols=138  Identities=18%  Similarity=0.246  Sum_probs=113.2

Q ss_pred             eeeecc-ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------------
Q 040682            4 KLVYSK-LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------   63 (216)
Q Consensus         4 ~lV~Ey-~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------------   63 (216)
                      |.|||| +..+. +..+.+.+++..+..|+..|+.||+|||+++   ||+||+|..|||+|.                  
T Consensus       445 ~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~  521 (694)
T KOG0694|consen  445 FFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ  521 (694)
T ss_pred             EEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccccCCC
Confidence            789999 44445 6667788999999999999999999999999   999999999999986                  


Q ss_pred             -----------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccccc
Q 040682           64 -----------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQ  132 (216)
Q Consensus        64 -----------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (216)
                                 .|+|||++.+..|+.++|-|+|||++||||.|+.||.+.++.+.      .        ..++...   
T Consensus       522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~------F--------dsI~~d~---  584 (694)
T KOG0694|consen  522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV------F--------DSIVNDE---  584 (694)
T ss_pred             CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH------H--------HHHhcCC---
Confidence                       29999999999999999999999999999999999986655432      0        0111110   


Q ss_pred             chhhHHHHHHHHHHHHhccccCCCCCCCH
Q 040682          133 DEISLSMLMRYVKVALLCVQETVADRPTM  161 (216)
Q Consensus       133 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  161 (216)
                      ...+...+.+.+.++.+.+..+|++|.-+
T Consensus       585 ~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  585 VRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence            11222367789999999999999999765

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.88  E-value=7.8e-23  Score=167.39  Aligned_cols=157  Identities=20%  Similarity=0.196  Sum_probs=108.5

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+++||   +|..+. .....+++.+++.++.|++.||+|||+.+   ++||||||+||+++.                
T Consensus        81 ~~~~~e~~~~~L~~~l-~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~  156 (332)
T cd07857          81 LYLYEELMEADLHQII-RSGQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARGFS  156 (332)
T ss_pred             EEEEEecccCCHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence            4778888   555553 23456899999999999999999999998   999999999999864                


Q ss_pred             -----------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhh-----------h
Q 040682           64 -----------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHA-----------W  114 (216)
Q Consensus        64 -----------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~-----------~  114 (216)
                                       .|+|||.+.+ ..++.++||||||+++|++++|..||.......  .....           +
T Consensus       157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~  234 (332)
T cd07857         157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD--QLNQILQVLGTPDEETL  234 (332)
T ss_pred             cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH--HHHHHHHHhCCCCHHHH
Confidence                             2899998876 468899999999999999999999986543211  00000           0


Q ss_pred             hhhccCccccc---c--ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 040682          115 DLWKDDRVHEL---I--DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVV  165 (216)
Q Consensus       115 ~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl  165 (216)
                      ...........   .  .+..............+.+++.+||+.+|.+||++.+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll  290 (332)
T cd07857         235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL  290 (332)
T ss_pred             HhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence            00000000000   0  000000000011245788999999999999999999987

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.88  E-value=3.3e-23  Score=163.41  Aligned_cols=146  Identities=27%  Similarity=0.235  Sum_probs=111.3

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ..++|+||    +|...... ...+++.++..++.|+++||.|||+.+   ++|+||+|+||+++.              
T Consensus        74 ~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~  149 (258)
T cd05578          74 NMYLVVDLLLGGDLRYHLSQ-KVKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATK  149 (258)
T ss_pred             eEEEEEeCCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccc
Confidence            36899999    56555332 357899999999999999999999998   999999999999975              


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|.+||.+.+..++.++|+||||+++|++++|..|+........   .........      ..+ 
T Consensus       150 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~------~~~-  219 (258)
T cd05578         150 VTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR---DQIRAKQET------ADV-  219 (258)
T ss_pred             cCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHH---HHHHHHhcc------ccc-
Confidence                          28999999888899999999999999999999999865443211   111110000      001 


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCH--HHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTM--SDVV  165 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~--~evl  165 (216)
                          ..+...+..+.+++.+||+.+|.+||++  .|++
T Consensus       220 ----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         220 ----LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             ----cCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence                1111245678999999999999999999  5554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.88  E-value=8.6e-23  Score=162.90  Aligned_cols=144  Identities=24%  Similarity=0.316  Sum_probs=110.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+..  ...+++..+..++.+++.|+.|||+.+   ++|+|++|+||+++.               
T Consensus        77 ~~lv~e~~~~~~l~~~i~--~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~  151 (277)
T cd06641          77 LWIIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQL  151 (277)
T ss_pred             EEEEEEeCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceec
Confidence            6899999    4555532  346899999999999999999999998   999999999999864               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|++||.+.+..++.++|+||||+++|++++|..|+.......     . ........     .+.
T Consensus       152 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-----~-~~~~~~~~-----~~~  220 (277)
T cd06641         152 TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK-----V-LFLIPKNN-----PPT  220 (277)
T ss_pred             ccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH-----H-HHHHhcCC-----CCC
Confidence                          2799999988888999999999999999999999985322111     0 00000000     011


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .     ....+..+.+++.+||+.+|++||++.+++++
T Consensus       221 ~-----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         221 L-----EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             C-----CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            1     11145668899999999999999999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.88  E-value=1.8e-22  Score=161.84  Aligned_cols=152  Identities=24%  Similarity=0.237  Sum_probs=112.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.. ....+++..+..++.|++.||+|||+.+   ++|+|++|.||+++.               
T Consensus        80 ~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~~  155 (288)
T cd05583          80 LHLILDYVNGGELFTHLY-QREHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (288)
T ss_pred             EEEEEecCCCCcHHHHHh-hcCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECcccccc
Confidence            5799999    5555532 2356899999999999999999999988   999999999999964               


Q ss_pred             ---------------CCCChhhhhcCC--CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ---------------GYMPPEYALRGF--FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~--~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                     .|++||...+..  .+.++||||||+++|+|++|..||........ ......... .    .  
T Consensus       156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-~~~~~~~~~-~----~--  227 (288)
T cd05583         156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS-QSEISRRIL-K----S--  227 (288)
T ss_pred             ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch-HHHHHHHHH-c----c--
Confidence                           288999887654  78899999999999999999999853322111 101000000 0    0  


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .+..+     ......+.+++.+||+.+|++||++.++.+.|+..
T Consensus       228 ~~~~~-----~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         228 KPPFP-----KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             CCCCC-----cccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence            01111     11345678999999999999999999998888864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.88  E-value=1.3e-22  Score=168.73  Aligned_cols=148  Identities=16%  Similarity=0.163  Sum_probs=106.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++..  ...++...+..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus       118 ~~lv~Ey~~gg~L~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a~~~  192 (371)
T cd05622         118 LYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM  192 (371)
T ss_pred             EEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCceeEc
Confidence            5899999    5665532  235889999999999999999999998   999999999999964               


Q ss_pred             ---------------CCCChhhhhcCC----CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 ---------------GYMPPEYALRGF----FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~----~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                     .|+|||++.+..    ++.++|||||||++|||++|..||.......     .............
T Consensus       193 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-----~~~~i~~~~~~~~  267 (371)
T cd05622         193 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-----TYSKIMNHKNSLT  267 (371)
T ss_pred             CcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH-----HHHHHHcCCCccc
Confidence                           299999987643    7899999999999999999999986433211     1111111110000


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCC--CCCHHHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVAD--RPTMSDVVSMI  168 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~evl~~L  168 (216)
                           .+   ...+.+..+.+++..|+..++.+  |+++.+++++.
T Consensus       268 -----~~---~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         268 -----FP---DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             -----CC---CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence                 00   01124567888999999844433  77888888754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.88  E-value=3.4e-23  Score=169.60  Aligned_cols=150  Identities=19%  Similarity=0.197  Sum_probs=107.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+.......+++..+..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        76 ~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~  152 (331)
T cd05624          76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKM  152 (331)
T ss_pred             EEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeec
Confidence            5899999    666665444567899999999999999999999998   999999999999964               


Q ss_pred             ---------------CCCChhhhhc-----CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 ---------------GYMPPEYALR-----GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 ---------------~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                     .|+|||++.+     ..++.++||||||+++|+|++|+.||.......     ..........  
T Consensus       153 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-----~~~~i~~~~~--  225 (331)
T cd05624         153 NQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-----TYGKIMNHEE--  225 (331)
T ss_pred             cCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH-----HHHHHHcCCC--
Confidence                           2999999875     457889999999999999999999986432211     0000000000  


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVAD--RPTMSDVVSM  167 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~evl~~  167 (216)
                         ....+. .. .+.+..+.+++.+|+..++.+  |+++.+++++
T Consensus       226 ---~~~~p~-~~-~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         226 ---RFQFPS-HI-TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             ---cccCCC-cc-ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence               000110 01 114567888999988865543  4678777654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.88  E-value=2.8e-23  Score=171.86  Aligned_cols=96  Identities=28%  Similarity=0.354  Sum_probs=84.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. ...+.+++..+..++.|++.||+|||+.+   |+||||||+|||++.               
T Consensus        76 ~~lv~E~~~gg~L~~~l-~~~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~  151 (360)
T cd05627          76 LYLIMEFLPGGDMMTLL-MKKDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGL  151 (360)
T ss_pred             EEEEEeCCCCccHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccc
Confidence            5899999    555553 33456899999999999999999999998   999999999999842               


Q ss_pred             -------------------------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh
Q 040682           64 -------------------------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS   94 (216)
Q Consensus        64 -------------------------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~   94 (216)
                                                                       .|+|||++.+..++.++|||||||++|||++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~t  231 (360)
T cd05627         152 KKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI  231 (360)
T ss_pred             ccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeeccc
Confidence                                                             2899999999999999999999999999999


Q ss_pred             CCCCCCcC
Q 040682           95 GKKSTAVY  102 (216)
Q Consensus        95 g~~~~~~~  102 (216)
                      |..||...
T Consensus       232 G~~Pf~~~  239 (360)
T cd05627         232 GYPPFCSE  239 (360)
T ss_pred             CCCCCCCC
Confidence            99998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.88  E-value=1.5e-22  Score=180.95  Aligned_cols=152  Identities=19%  Similarity=0.239  Sum_probs=111.2

Q ss_pred             eeeeecc----cccccccC----------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----
Q 040682            3 KKLVYSK----LLDAANID----------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----   63 (216)
                      .|+||||    +|.++...          ....+++.++..++.|++.||+|||+++   |+||||||+||+++.     
T Consensus        77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vK  153 (932)
T PRK13184         77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVV  153 (932)
T ss_pred             EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEE
Confidence            5899999    66655221          1234567888999999999999999998   999999999999853     


Q ss_pred             ------------------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCc
Q 040682           64 ------------------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAV  101 (216)
Q Consensus        64 ------------------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~  101 (216)
                                                                .|+|||.+.+..++.++|||||||++|||++|..||..
T Consensus       154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~  233 (932)
T PRK13184        154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR  233 (932)
T ss_pred             EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence                                                      28999999999999999999999999999999999864


Q ss_pred             CCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCC-HHHHHHHHccc
Q 040682          102 YNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPT-MSDVVSMISNE  171 (216)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~evl~~L~~~  171 (216)
                      .........         .   ....+...  ....+.+..+.+++.+||+.+|++|++ +.++++.|+..
T Consensus       234 ~~~~ki~~~---------~---~i~~P~~~--~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        234 KKGRKISYR---------D---VILSPIEV--APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             cchhhhhhh---------h---hccChhhc--cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            322111000         0   00001000  001124566889999999999999965 67777777664

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.88  E-value=5.8e-23  Score=165.00  Aligned_cols=143  Identities=22%  Similarity=0.237  Sum_probs=109.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++... ...++..++..++.|++.||.|||+.+   ++|+||+|+||+++.               
T Consensus        76 ~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~  151 (290)
T cd05580          76 LYLVMEYVPGGELFSHLRK-SGRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRV  151 (290)
T ss_pred             EEEEEecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCcccc
Confidence            5899999    56555333 357899999999999999999999998   999999999999975               


Q ss_pred             -----------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccccc
Q 040682           64 -----------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQ  132 (216)
Q Consensus        64 -----------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (216)
                                 .|++||.+.+...+.++||||||+++|+|++|..||......      .........      ....+.
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~------~~~~~~  219 (290)
T cd05580         152 KGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI------QIYEKILEG------KVRFPS  219 (290)
T ss_pred             CCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHhcC------CccCCc
Confidence                       289999998888899999999999999999999998543311      001111010      011111


Q ss_pred             chhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 040682          133 DEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVS  166 (216)
Q Consensus       133 ~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~  166 (216)
                           .....+.+++.+||+.+|.+|+     ++.++++
T Consensus       220 -----~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         220 -----FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             -----cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence                 1345788999999999999999     6666653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.88  E-value=4.2e-23  Score=165.37  Aligned_cols=139  Identities=25%  Similarity=0.334  Sum_probs=111.3

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CC
Q 040682           17 DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GY   65 (216)
Q Consensus        17 ~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y   65 (216)
                      ...+.++..+...++.|++.|++|||..+   +||.||..+|+++++                               .|
T Consensus       388 ~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkW  464 (563)
T KOG1024|consen  388 SYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKW  464 (563)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccc
Confidence            44556788888899999999999999999   999999999999987                               29


Q ss_pred             CChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHH
Q 040682           66 MPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYV  144 (216)
Q Consensus        66 ~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (216)
                      ++||.+....|+.++||||||+++|||+| |+.|+..-+..+.      ..+++++  ..+        ..+..|+.+++
T Consensus       465 MslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm------~~ylkdG--yRl--------aQP~NCPDeLf  528 (563)
T KOG1024|consen  465 MSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM------EHYLKDG--YRL--------AQPFNCPDELF  528 (563)
T ss_pred             cCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH------HHHHhcc--cee--------cCCCCCcHHHH
Confidence            99999999999999999999999999987 8888754433322      1122221  001        11222788899


Q ss_pred             HHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          145 KVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       145 ~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                      .+|.-||...|++||++.|++.-|.+.+..
T Consensus       529 ~vMacCWallpeeRPsf~Qlv~cLseF~~q  558 (563)
T KOG1024|consen  529 TVMACCWALLPEERPSFSQLVICLSEFHTQ  558 (563)
T ss_pred             HHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence            999999999999999999999999876543

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.88  E-value=1.9e-22  Score=165.86  Aligned_cols=157  Identities=23%  Similarity=0.253  Sum_probs=110.5

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++|+||   +|.++..  ...+++.++..++.|++.||+|||+.+   ++|+||||+||+++.                
T Consensus        95 ~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~  169 (343)
T cd07851          95 VYLVTHLMGADLNNIVK--CQKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLARHTD  169 (343)
T ss_pred             EEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccccccc
Confidence            6899999   5655533  246899999999999999999999998   999999999999975                


Q ss_pred             ----------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh-----------hhccCc
Q 040682           64 ----------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD-----------LWKDDR  121 (216)
Q Consensus        64 ----------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~  121 (216)
                                .|++||.+.+. .++.++||||||+++|++++|..||........  ......           ......
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~  247 (343)
T cd07851         170 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQ--LKRIMNLVGTPDEELLQKISSES  247 (343)
T ss_pred             ccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHhcCCCCHHHHhhccchh
Confidence                      28999988753 678999999999999999999999864432110  000000           000000


Q ss_pred             ccccccc--ccccc---hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          122 VHELIDP--VITQD---EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       122 ~~~~~~~--~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .......  .....   ......+.++.+++.+||+.+|++||++.+|++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         248 ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            0000000  00000   000113567899999999999999999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.88  E-value=1.5e-22  Score=163.00  Aligned_cols=147  Identities=18%  Similarity=0.221  Sum_probs=115.5

Q ss_pred             eeeeecc----ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      .+|||||    .|..+ .....+.+++..++.++.+|+-||+|||-.|   ||.||+||+|||+..+             
T Consensus       152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~  228 (459)
T KOG0610|consen  152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLR  228 (459)
T ss_pred             eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeecccccc
Confidence            4799999    44444 3344556999999999999999999999999   9999999999998641             


Q ss_pred             ------------------------------------------------------------------------CCChhhhh
Q 040682           65 ------------------------------------------------------------------------YMPPEYAL   72 (216)
Q Consensus        65 ------------------------------------------------------------------------y~aPE~~~   72 (216)
                                                                                              |.|||++.
T Consensus       229 ~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~  308 (459)
T KOG0610|consen  229 CPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIR  308 (459)
T ss_pred             CCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeee
Confidence                                                                                    99999999


Q ss_pred             cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccc
Q 040682           73 RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQ  152 (216)
Q Consensus        73 ~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  152 (216)
                      |.....++|-|+|||++|||+.|..||.+.+..+.              +..++-..+.-...+ ..+-.+.+|+.+-|.
T Consensus       309 G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T--------------l~NIv~~~l~Fp~~~-~vs~~akDLIr~LLv  373 (459)
T KOG0610|consen  309 GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET--------------LRNIVGQPLKFPEEP-EVSSAAKDLIRKLLV  373 (459)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh--------------HHHHhcCCCcCCCCC-cchhHHHHHHHHHhc
Confidence            99999999999999999999999999987665443              111111111111111 256678999999999


Q ss_pred             cCCCCCCC----HHHHHHH
Q 040682          153 ETVADRPT----MSDVVSM  167 (216)
Q Consensus       153 ~~p~~Rps----~~evl~~  167 (216)
                      +||.+|..    +.||.++
T Consensus       374 KdP~kRlg~~rGA~eIK~H  392 (459)
T KOG0610|consen  374 KDPSKRLGSKRGAAEIKRH  392 (459)
T ss_pred             cChhhhhccccchHHhhcC
Confidence            99999998    7777643

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.87  E-value=1.6e-23  Score=187.28  Aligned_cols=146  Identities=25%  Similarity=0.365  Sum_probs=112.7

Q ss_pred             eeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            4 KLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      ++.|||    +|.++ ..+.+-.++.....+..|+++|++|||+.|   |+||||||.||+++.+               
T Consensus      1310 ~IFMEyC~~GsLa~l-l~~gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASL-LEHGRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred             HHHHHHhccCcHHHH-HHhcchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEec
Confidence            467899    88887 333445778888889999999999999999   9999999999999863               


Q ss_pred             ------------------CCChhhhhcC---CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           65 ------------------YMPPEYALRG---FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        65 ------------------y~aPE~~~~~---~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                        |||||++.+.   ..-.+.||||+|||+.||.||++||...+.+..-.    +... .+.  
T Consensus      1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIM----y~V~-~gh-- 1458 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIM----YHVA-AGH-- 1458 (1509)
T ss_pred             CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHH----hHHh-ccC--
Confidence                              9999999764   45678999999999999999999987655443211    1111 110  


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                         .|     ..|...+.+-.+|+.+|++.||..|.++.|+++.=
T Consensus      1459 ---~P-----q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1459 ---KP-----QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred             ---CC-----CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence               11     12223677889999999999999999998887653

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=1.9e-22  Score=158.28  Aligned_cols=144  Identities=25%  Similarity=0.326  Sum_probs=110.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++... ...+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.               
T Consensus        74 ~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~  149 (254)
T cd06627          74 LYIILEYAENGSLRQIIKK-FGPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKL  149 (254)
T ss_pred             EEEEEecCCCCcHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceec
Confidence            5789999    56665332 257899999999999999999999998   999999999999985               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|++||...+...+.++|||++|++++++++|..|+......     ...+... ..     ..+.
T Consensus       150 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~-----~~~~~~~-~~-----~~~~  218 (254)
T cd06627         150 NDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM-----AALFRIV-QD-----DHPP  218 (254)
T ss_pred             CCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH-----HHHHHHh-cc-----CCCC
Confidence                          289999988878889999999999999999999997543311     1111110 00     0111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .     +......+.+++.+||+.+|++||++.+++.
T Consensus       219 ~-----~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         219 L-----PEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             C-----CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            1     1113567889999999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.87  E-value=1.8e-22  Score=166.23  Aligned_cols=159  Identities=22%  Similarity=0.225  Sum_probs=108.5

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++|+|+   +|.++..  ...+++..+..++.|++.||+|||+.+   ++|+||||+||+++.                
T Consensus        97 ~~lv~~~~~~~L~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~  171 (345)
T cd07877          97 VYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD  171 (345)
T ss_pred             EEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEEeccccccccc
Confidence            4677777   5555432  235899999999999999999999998   999999999999975                


Q ss_pred             ----------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhh----------hhhhhccCcc
Q 040682           64 ----------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGH----------AWDLWKDDRV  122 (216)
Q Consensus        64 ----------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~----------~~~~~~~~~~  122 (216)
                                .|+|||.+.+ ..++.++|||||||++|++++|..||........ ....          ..........
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  250 (345)
T cd07877         172 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLILRLVGTPGAELLKKISSESA  250 (345)
T ss_pred             ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHhhcccHhH
Confidence                      2899998876 4688899999999999999999999864332111 0000          0000000000


Q ss_pred             ccccc--cccccchhh---HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          123 HELID--PVITQDEIS---LSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       123 ~~~~~--~~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ...+.  +..+.....   ......+.+++.+|++.+|.+||++.+++.+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         251 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            00000  000000000   0134568899999999999999999998854

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.87  E-value=2.8e-22  Score=165.79  Aligned_cols=146  Identities=25%  Similarity=0.230  Sum_probs=116.9

Q ss_pred             eeeeecc-----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK-----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey-----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++|||+     .++.+...   .+++..+..+++|+++|+.|||+.+   |+|||+||+|+|+..              
T Consensus       111 ~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFG  184 (382)
T KOG0032|consen  111 VYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFG  184 (382)
T ss_pred             EEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence            5899999     33333222   3999999999999999999999998   999999999999864              


Q ss_pred             ------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 ------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 ------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                        .|+|||++.+..|+..+||||+|+++|.|++|.+||.+........      .....     
T Consensus       185 la~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~------~i~~~-----  253 (382)
T KOG0032|consen  185 LAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL------AILRG-----  253 (382)
T ss_pred             CceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH------HHHcC-----
Confidence                              2999999999999999999999999999999999997655433211      01011     


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       +......+++. .+..+.+++..++..||.+|+++.+++++
T Consensus       254 -~~~f~~~~w~~-is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  254 -DFDFTSEPWDD-ISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             -CCCCCCCCccc-cCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence             11223344554 68889999999999999999999999984

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.87  E-value=1.6e-22  Score=166.30  Aligned_cols=157  Identities=22%  Similarity=0.246  Sum_probs=109.2

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|..+..  ...+++.+++.++.|++.||+|||+.+   ++||||||+||+++.                
T Consensus        95 ~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~  169 (343)
T cd07880          95 FYLVMPFMGTDLGKLMK--HEKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQTD  169 (343)
T ss_pred             EEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence            4789999   5555532  356899999999999999999999998   999999999999974                


Q ss_pred             ----------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhh----------hhhhhccCcc
Q 040682           64 ----------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGH----------AWDLWKDDRV  122 (216)
Q Consensus        64 ----------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~----------~~~~~~~~~~  122 (216)
                                .|++||.+.+ ..++.++|+||||++++++++|..||........ ....          ..........
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  248 (343)
T cd07880         170 SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ-LMEIMKVTGTPSKEFVQKLQSEDA  248 (343)
T ss_pred             cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHhhcchhH
Confidence                      2789999876 3588999999999999999999999864432110 0000          0000000000


Q ss_pred             ccccc--cccccc---hhhHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 040682          123 HELID--PVITQD---EISLSMLMRYVKVALLCVQETVADRPTMSDVV  165 (216)
Q Consensus       123 ~~~~~--~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl  165 (216)
                      .....  +.....   .........+.+++.+|++.+|++||++.+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l  296 (343)
T cd07880         249 KNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL  296 (343)
T ss_pred             HHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence            00000  000000   00111345688999999999999999999998

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=2.1e-22  Score=159.53  Aligned_cols=144  Identities=24%  Similarity=0.275  Sum_probs=108.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++.. ....+++..+..++.|++.||.|||+++   ++|+|+||+||+++.               
T Consensus        81 ~~~v~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  156 (264)
T cd06653          81 LSIFVEYMPGGSIKDQLK-AYGALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRI  156 (264)
T ss_pred             EEEEEEeCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccccc
Confidence            4789999    5655533 2345889999999999999999999998   999999999999874               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|++||.+.+..++.++|+||||++++++++|..||.......     ......     ....
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~-----~~~~  226 (264)
T cd06653         157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA-----AIFKIA-----TQPT  226 (264)
T ss_pred             ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH-----HHHHHH-----cCCC
Confidence                             1789999988888999999999999999999999985321111     000000     0000


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .+     ..+......+.+++.+||+ ++..||++.+++.
T Consensus       227 ~~-----~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         227 KP-----MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             CC-----CCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            11     1122255679999999999 4699999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.87  E-value=5.6e-22  Score=162.23  Aligned_cols=160  Identities=20%  Similarity=0.235  Sum_probs=109.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++|+||   +|..+.  ....++...+..++.|++.||+|||+.+   ++|+||+|+||+++.                
T Consensus        85 ~~lv~e~~~~~L~~~~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~  159 (328)
T cd07856          85 IYFVTELLGTDLHRLL--TSRPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARIQD  159 (328)
T ss_pred             EEEEeehhccCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccccC
Confidence            5789999   555442  2346888889999999999999999998   999999999999964                


Q ss_pred             ----------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc-h--------hhhhhhhhccCccc
Q 040682           64 ----------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN-L--------LGHAWDLWKDDRVH  123 (216)
Q Consensus        64 ----------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~  123 (216)
                                .|++||.+.+ ..++.++||||||++++++++|..||......... .        ..............
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (328)
T cd07856         160 PQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTL  239 (328)
T ss_pred             CCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhH
Confidence                      2899998766 46889999999999999999999998654321100 0        00000000000000


Q ss_pred             cccccccc--cchhh---HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          124 ELIDPVIT--QDEIS---LSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       124 ~~~~~~~~--~~~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      +.+.....  ..+..   ......+.+++.+||+.+|++||++.+++..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         240 RFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00000000  00000   1134678999999999999999999998755

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.86  E-value=7.8e-22  Score=161.58  Aligned_cols=158  Identities=24%  Similarity=0.313  Sum_probs=110.5

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|.++. .....+++..+..++.|++.||+|||+.+   ++|+||+|+||+++.                
T Consensus        95 ~~lv~e~~~~~l~~~l-~~~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~dfg~~~~~~  170 (335)
T PTZ00024         95 INLVMDIMASDLKKVV-DRKIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYG  170 (335)
T ss_pred             EEEEEeccccCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEECCccceeecc
Confidence            5789999   555543 23446899999999999999999999998   999999999999864                


Q ss_pred             ---------------------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh
Q 040682           64 ---------------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD  115 (216)
Q Consensus        64 ---------------------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~  115 (216)
                                                 .|++||.+.+. .++.++|||||||++|++++|..||........  ......
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~--~~~i~~  248 (335)
T PTZ00024        171 YPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQ--LGRIFE  248 (335)
T ss_pred             cccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHH
Confidence                                       18899988765 468999999999999999999999875543211  111111


Q ss_pred             hhc---cCcccc--------ccccccccc--hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          116 LWK---DDRVHE--------LIDPVITQD--EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       116 ~~~---~~~~~~--------~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ...   ...+..        ......+..  .........+.+++.+||+.+|++||++.|++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        249 LLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             HhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            000   000000        000000000  000113567889999999999999999999985

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.86  E-value=1.3e-21  Score=153.32  Aligned_cols=140  Identities=25%  Similarity=0.224  Sum_probs=107.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++... ...+++..+..++.|++.||.|||+.+   ++|+||+|.||+++.               
T Consensus        68 ~~~v~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~  143 (250)
T cd05123          68 LYLVLEYAPGGELFSHLSK-EGRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKEL  143 (250)
T ss_pred             eEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceec
Confidence            5899999    55555332 336899999999999999999999988   999999999999875               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|++||...+...+.++|+|+||+++|++++|..||.......     ...... ..      ...
T Consensus       144 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-----~~~~~~-~~------~~~  211 (250)
T cd05123         144 SSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE-----IYEKIL-KD------PLR  211 (250)
T ss_pred             ccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-----HHHHHh-cC------CCC
Confidence                          2899999988888999999999999999999999985433211     000000 00      001


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSD  163 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~e  163 (216)
                           .+......+.+++.+||..+|+.||++++
T Consensus       212 -----~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         212 -----FPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             -----CCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence                 11112456889999999999999999954

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.86  E-value=4.5e-22  Score=158.36  Aligned_cols=143  Identities=24%  Similarity=0.213  Sum_probs=109.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.. ....+++.++..++.|++.||+|||+.+   ++|+|++|+||+++.               
T Consensus        77 ~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~  152 (280)
T cd05581          77 LYFVLEYAPNGELLQYIR-KYGSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVL  152 (280)
T ss_pred             EEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCcccccc
Confidence            5899999    6666633 3347999999999999999999999998   999999999999863               


Q ss_pred             ----------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccch
Q 040682           64 ----------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNL  109 (216)
Q Consensus        64 ----------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~  109 (216)
                                                        .|++||...+...+.++|||+||++++++++|..|+.......  .
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~  230 (280)
T cd05581         153 DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL--T  230 (280)
T ss_pred             CCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH--H
Confidence                                              2788999888888999999999999999999999986443111  0


Q ss_pred             hhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCH----HHHHH
Q 040682          110 LGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTM----SDVVS  166 (216)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~----~evl~  166 (216)
                      .....    ..      ...     .+......+.+++.+||+.+|++||++    .++++
T Consensus       231 ~~~~~----~~------~~~-----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         231 FQKIL----KL------EYS-----FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HHHHH----hc------CCC-----CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            00000    00      000     111135678999999999999999999    66654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.86  E-value=2e-22  Score=173.75  Aligned_cols=153  Identities=24%  Similarity=0.304  Sum_probs=122.3

Q ss_pred             eeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            4 KLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .||++|    .|-++...++..+.....+.|..||++||.|||.+.   ++||||..+|||+...               
T Consensus       773 qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~  849 (1177)
T KOG1025|consen  773 QLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLA  849 (1177)
T ss_pred             HHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence            467888    666776778889999999999999999999999988   9999999999999751               


Q ss_pred             ----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           65 ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        65 ----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      |+|-|.+....|+.++|||||||++||++| |..|+++....+               +..+++
T Consensus       850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e---------------I~dlle  914 (1177)
T KOG1025|consen  850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE---------------IPDLLE  914 (1177)
T ss_pred             cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH---------------hhHHHh
Confidence                            777788888899999999999999999988 888875433222               222222


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      .......++. +...++-++.+||..|++.||.++++.+.+..+.+.+
T Consensus       915 ~geRLsqPpi-CtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp  961 (1177)
T KOG1025|consen  915 KGERLSQPPI-CTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP  961 (1177)
T ss_pred             ccccCCCCCC-ccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence            2222222333 7888999999999999999999999998888765554

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.86  E-value=1.7e-21  Score=156.34  Aligned_cols=148  Identities=24%  Similarity=0.255  Sum_probs=107.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.. ....+++.++..++.|++.||+|||+.+   ++|+||+|+||+++.               
T Consensus        80 ~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  155 (290)
T cd05613          80 LHLILDYINGGELFTHLS-QRERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEF  155 (290)
T ss_pred             EEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceec
Confidence            5799999    5555532 3456899999999999999999999998   999999999999964               


Q ss_pred             ---------------CCCChhhhhcC--CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ---------------GYMPPEYALRG--FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ---------------~y~aPE~~~~~--~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                     .|++||.+.+.  .++.++||||||+++|++++|..||....... ............       
T Consensus       156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~-~~~~~~~~~~~~-------  227 (290)
T cd05613         156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN-SQAEISRRILKS-------  227 (290)
T ss_pred             ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc-cHHHHHHHhhcc-------
Confidence                           28899988753  46789999999999999999999985322211 111111110000       


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                      .+.     .+......+.+++.+||+.+|++||     ++.+++.+
T Consensus       228 ~~~-----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         228 EPP-----YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             CCC-----CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            011     1112456788999999999999997     66666543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.86  E-value=1.9e-21  Score=150.95  Aligned_cols=147  Identities=25%  Similarity=0.225  Sum_probs=110.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|..+.... ..+++.++..++.+++.||++||..+   ++|+|++|+||+++.               
T Consensus        62 ~~l~~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~  137 (244)
T smart00220       62 LYLVMEYCDGGDLFDLLKKR-GRLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQL  137 (244)
T ss_pred             EEEEEeCCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeee
Confidence            5889999    566653332 23899999999999999999999998   999999999999975               


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                   .|++||...+..++.++|||+||++++++++|..|+........     ........        ..
T Consensus       138 ~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~-----~~~~~~~~--------~~  204 (244)
T smart00220      138 DPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLE-----LFKKIGKP--------KP  204 (244)
T ss_pred             ccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-----HHHHHhcc--------CC
Confidence                         28999999888889999999999999999999999854321111     01111110        00


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ...........++.+++.+||..+|++||++.++++
T Consensus       205 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      205 PFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             CCccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            000000003457899999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.86  E-value=1.1e-21  Score=174.76  Aligned_cols=147  Identities=23%  Similarity=0.315  Sum_probs=102.6

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      +-|+=|||    +++++..++...-.....++++++|++||+|+|++|   +||||+||.||.++..             
T Consensus       670 ~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  670 ILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATD  746 (1351)
T ss_pred             EEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCc---eeeccCCcceeEEcCCCCeeecccccchh
Confidence            45788999    555553333221157788999999999999999999   9999999999999861             


Q ss_pred             ----------------------------------CCChhhhhcC---CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc
Q 040682           65 ----------------------------------YMPPEYALRG---FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF  107 (216)
Q Consensus        65 ----------------------------------y~aPE~~~~~---~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~  107 (216)
                                                        |+|||++.+.   .|+.|+|+||+|++++||+.   ||....+ . 
T Consensus       747 ~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME-R-  821 (1351)
T KOG1035|consen  747 LKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME-R-  821 (1351)
T ss_pred             hhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHH-H-
Confidence                                              9999999865   49999999999999999995   3421111 0 


Q ss_pred             chhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          108 NLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                         ..+...+....+..-      ...... ..+.-.+++.++++.||++|||+.|+|.
T Consensus       822 ---a~iL~~LR~g~iP~~------~~f~~~-~~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  822 ---ASILTNLRKGSIPEP------ADFFDP-EHPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             ---HHHHHhcccCCCCCC------cccccc-cchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence               011111111111111      001111 3344578999999999999999998863

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.85  E-value=6.2e-22  Score=172.08  Aligned_cols=137  Identities=18%  Similarity=0.187  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CCCChhhhhc
Q 040682           25 QVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GYMPPEYALR   73 (216)
Q Consensus        25 ~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y~aPE~~~~   73 (216)
                      ..+..++.|++.||+|||+++   |+||||||+|||++.                               .|+|||.+..
T Consensus       255 ~~i~~i~~qll~aL~yLH~~g---IiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~  331 (566)
T PLN03225        255 KIIQTIMRQILFALDGLHSTG---IVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIM  331 (566)
T ss_pred             HHHHHHHHHHHHHHHHHHHCC---EEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhc
Confidence            446689999999999999998   999999999999973                               2899996642


Q ss_pred             C----------------------CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhh-hccCcccccccccc
Q 040682           74 G----------------------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDL-WKDDRVHELIDPVI  130 (216)
Q Consensus        74 ~----------------------~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  130 (216)
                      .                      .+..++|||||||++|||+++..++...   ...+....... .....+.....+..
T Consensus       332 ~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~  408 (566)
T PLN03225        332 STQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSN---LIQFNRQLKRNDYDLVAWRKLVEPRA  408 (566)
T ss_pred             cCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchH---HHHHHHHHHhcCCcHHHHHHhhcccc
Confidence            2                      2345669999999999999866543211   00000000000 00000000111110


Q ss_pred             ccc-----hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          131 TQD-----EISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       131 ~~~-----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ...     ...........+|+.+|++.||.+|||+.|++++
T Consensus       409 ~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~H  450 (566)
T PLN03225        409 SPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAH  450 (566)
T ss_pred             chhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCC
Confidence            000     0000022345689999999999999999999874

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.85  E-value=7.8e-22  Score=158.97  Aligned_cols=144  Identities=22%  Similarity=0.273  Sum_probs=114.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      ..+||||    .|+++ ...++.|++.++..+++||..|+.|+|.++   ++|||+|.+|||++.+              
T Consensus       128 IvivMEYaS~GeLYDY-iSer~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly  203 (668)
T KOG0611|consen  128 IVIVMEYASGGELYDY-ISERGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLY  203 (668)
T ss_pred             EEEEEEecCCccHHHH-HHHhccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhh
Confidence            4789999    56666 555677999999999999999999999998   9999999999999873              


Q ss_pred             --------------CCChhhhhcCCCC-cchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           65 --------------YMPPEYALRGFFS-IKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        65 --------------y~aPE~~~~~~~~-~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    |.+||...|.+|. ..+|.||+|+++|-|+.|..||++.+-..  +    ..++..+...   +|.
T Consensus       204 ~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~--l----vrQIs~GaYr---EP~  274 (668)
T KOG0611|consen  204 ADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR--L----VRQISRGAYR---EPE  274 (668)
T ss_pred             ccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH--H----HHHhhccccc---CCC
Confidence                          9999999999886 68899999999999999999997655321  1    1112222111   111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                               .+....-++.++|..+|+.|.++.+|..+.
T Consensus       275 ---------~PSdA~gLIRwmLmVNP~RRATieDiAsHW  304 (668)
T KOG0611|consen  275 ---------TPSDASGLIRWMLMVNPERRATIEDIASHW  304 (668)
T ss_pred             ---------CCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence                     222356688999999999999999998765

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.85  E-value=1.8e-21  Score=152.52  Aligned_cols=154  Identities=22%  Similarity=0.346  Sum_probs=114.1

Q ss_pred             eeeeecc-ccccc--ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK-LLDAA--NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey-~l~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      +|||||- ...-+  ++.++..+++.++..+..+|+.||.|||.+|   |.|||+||+|||...                
T Consensus       151 FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgS  227 (463)
T KOG0607|consen  151 FYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGS  227 (463)
T ss_pred             EEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeecccccc
Confidence            6999999 21111  3466677999999999999999999999999   999999999999864                


Q ss_pred             -----------------------CCCChhhhh---c--CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc-------
Q 040682           64 -----------------------GYMPPEYAL---R--GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN-------  108 (216)
Q Consensus        64 -----------------------~y~aPE~~~---~--~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~-------  108 (216)
                                             .|||||+..   +  ..|+.++|.||+|+++|=||+|.+||.+.-+..+.       
T Consensus       228 g~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~C  307 (463)
T KOG0607|consen  228 GIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVC  307 (463)
T ss_pred             ccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCcc
Confidence                                   199999764   2  26899999999999999999999999776543331       


Q ss_pred             -h-hhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          109 -L-LGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       109 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       . -+...+.++.+..      ..+..++.. .+.+..+++..-+..++.+|.++.+++.
T Consensus       308 r~CQ~~LFesIQEGkY------eFPdkdWah-IS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  308 RVCQNKLFESIQEGKY------EFPDKDWAH-ISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHHHHHHHHHHhccCC------cCChhhhHH-hhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence             0 0111111111110      011223333 6778889999999999999999988876

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.84  E-value=1.1e-22  Score=155.60  Aligned_cols=151  Identities=26%  Similarity=0.394  Sum_probs=111.7

Q ss_pred             eeeecc---ccccc----ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC------------
Q 040682            4 KLVYSK---LLDAA----NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------   64 (216)
Q Consensus         4 ~lV~Ey---~l~~~----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~------------   64 (216)
                      |+.||.   +++.+    ...++..+++...-.|......||.||-..-  +||||||||+|||++..            
T Consensus       139 WiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcG  216 (361)
T KOG1006|consen  139 WICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICG  216 (361)
T ss_pred             eeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchH
Confidence            888999   77666    3345567888888889999999999998743  69999999999999862            


Q ss_pred             ----------------CCChhhhhcC--CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 ----------------YMPPEYALRG--FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 ----------------y~aPE~~~~~--~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      |+|||.+...  .|+.++||||+|++++|+.||.-|+..-+.    .+.+...... ++.    
T Consensus       217 qLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s----vfeql~~Vv~-gdp----  287 (361)
T KOG1006|consen  217 QLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS----VFEQLCQVVI-GDP----  287 (361)
T ss_pred             hHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH----HHHHHHHHHc-CCC----
Confidence                            9999988643  599999999999999999999999643221    2222111111 111    


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       |.+.......+.+..++.++..|+-+|-+.||...++++
T Consensus       288 -p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  288 -PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             -CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence             111111111226778999999999999999999998864

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.84  E-value=2.4e-21  Score=161.93  Aligned_cols=155  Identities=21%  Similarity=0.347  Sum_probs=113.5

Q ss_pred             eeecc----cccccccCCCCC-CChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            5 LVYSK----LLDAANIDKKRL-LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         5 lV~Ey----~l~~~~~~~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      ||+||    .|..+...+.-+ +......+|+.||+.||+||.+.+   ++|||+.++|+|++..               
T Consensus       612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~ly  688 (807)
T KOG1094|consen  612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLY  688 (807)
T ss_pred             HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccc
Confidence            67888    666664444222 456667789999999999999998   9999999999999872               


Q ss_pred             ----------------CCChhhhhcCCCCcchhhhhHHHHHHHHH--hCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEIL--SGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 ----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      |+|+|.+.-+++++++|||+||+++||++  +...|+....+++.  +...-....... ....
T Consensus       689 sg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v--ven~~~~~~~~~-~~~~  765 (807)
T KOG1094|consen  689 SGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV--VENAGEFFRDQG-RQVV  765 (807)
T ss_pred             cCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH--HHhhhhhcCCCC-ccee
Confidence                            99999999999999999999999999985  47778754433322  111011111110 0110


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      -      ..+.-|+..++++|++||..+..+||++.++...|+..
T Consensus       766 l------~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  766 L------SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             c------cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            0      11112677899999999999999999999999999864

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.84  E-value=1e-21  Score=153.60  Aligned_cols=159  Identities=23%  Similarity=0.193  Sum_probs=113.8

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .|+||||   +|..+..   -.++-.+...+..|++.|+.|||+.+   |+|||+||+||++...               
T Consensus        96 ~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar~e~  169 (369)
T KOG0665|consen   96 VYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLARTED  169 (369)
T ss_pred             HHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhcccC
Confidence            4789999   7777633   33788899999999999999999999   9999999999999752               


Q ss_pred             -------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-------------chhhh------
Q 040682           65 -------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-------------NLLGH------  112 (216)
Q Consensus        65 -------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-------------~~~~~------  112 (216)
                                   |.|||++.+..+...+||||.||++.||++|...|.+......             .+...      
T Consensus       170 ~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r  249 (369)
T KOG0665|consen  170 TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVR  249 (369)
T ss_pred             cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHH
Confidence                         9999999999999999999999999999999988875543211             00000      


Q ss_pred             ----hhhhhccCccccccccccc--cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          113 ----AWDLWKDDRVHELIDPVIT--QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       113 ----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                          ..+........+.+-...-  ..+.+.-......+++.++|..+|++|.|+.++|.+
T Consensus       250 ~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  250 NYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             HHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence                0000111111111111000  001111134567899999999999999999999864

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=1.1e-20  Score=144.05  Aligned_cols=166  Identities=17%  Similarity=0.247  Sum_probs=120.8

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .||||.+   .|..++......++..++++++.++.+||.|+|...   |+|||+|+.|+|++.+               
T Consensus        99 ~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGlar~fs  175 (376)
T KOG0669|consen   99 FYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLARAFS  175 (376)
T ss_pred             eeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccccccee
Confidence            5899998   666666666677999999999999999999999988   9999999999999872               


Q ss_pred             ------------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc---------chhhhhhhh
Q 040682           65 ------------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF---------NLLGHAWDL  116 (216)
Q Consensus        65 ------------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~---------~~~~~~~~~  116 (216)
                                        |++||.+.|. .+..+.|||.-||++.||.+|.+.+.+......         +.-..+|+.
T Consensus       176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~  255 (376)
T KOG0669|consen  176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPN  255 (376)
T ss_pred             cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCC
Confidence                              9999999987 799999999999999999999988765443221         111222333


Q ss_pred             hccCccccccc-cccccchhh--HHH------HHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          117 WKDDRVHELID-PVITQDEIS--LSM------LMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       117 ~~~~~~~~~~~-~~~~~~~~~--~~~------~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ...-.+.+.+. +.++.....  .+.      ....++++...+..||.+|+.+.+++.+---+
T Consensus       256 ~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~  319 (376)
T KOG0669|consen  256 VDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFW  319 (376)
T ss_pred             cccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhh
Confidence            22222222221 101111000  001      12578899999999999999999998765544

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.82  E-value=2.1e-20  Score=152.25  Aligned_cols=126  Identities=27%  Similarity=0.309  Sum_probs=102.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------------------CCCChhh
Q 040682           19 KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------------------GYMPPEY   70 (216)
Q Consensus        19 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------------------~y~aPE~   70 (216)
                      ...+++..++.++.+|+.||++||..+   |+.||+||+|||+|+                            ||||||+
T Consensus       281 ~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEv  357 (591)
T KOG0986|consen  281 NPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEV  357 (591)
T ss_pred             CCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHHH
Confidence            347999999999999999999999998   999999999999987                            4999999


Q ss_pred             hhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc--ccchhhHHHHHHHHHHHH
Q 040682           71 ALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI--TQDEISLSMLMRYVKVAL  148 (216)
Q Consensus        71 ~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~  148 (216)
                      +....|+.+.|-|++||++|||+.|+.||........               .+-++...  ...+.+...+++..++..
T Consensus       358 l~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk---------------~eEvdrr~~~~~~ey~~kFS~eakslc~  422 (591)
T KOG0986|consen  358 LQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK---------------REEVDRRTLEDPEEYSDKFSEEAKSLCE  422 (591)
T ss_pred             HcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh---------------HHHHHHHHhcchhhcccccCHHHHHHHH
Confidence            9999999999999999999999999999864443322               11111110  122334457888999999


Q ss_pred             hccccCCCCCCCHH
Q 040682          149 LCVQETVADRPTMS  162 (216)
Q Consensus       149 ~cl~~~p~~Rps~~  162 (216)
                      .-|..||++|.-+.
T Consensus       423 ~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  423 GLLTKDPEKRLGCR  436 (591)
T ss_pred             HHHccCHHHhccCC
Confidence            99999999997553

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.81  E-value=4e-20  Score=142.13  Aligned_cols=157  Identities=16%  Similarity=0.215  Sum_probs=117.6

Q ss_pred             eeeeecc-ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----------------
Q 040682            3 KKLVYSK-LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------   63 (216)
Q Consensus         3 ~~lV~Ey-~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----------------   63 (216)
                      .+.++|| .+.++ ..-...++.+...++++.|++.||.|||+++   ++|||||.+|||+-.                 
T Consensus        97 YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~  173 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKV  173 (378)
T ss_pred             EEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeeccccccc
Confidence            4678999 44444 4445567999999999999999999999999   999999999999854                 


Q ss_pred             -----------CCCChhhhhcC-----CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 -----------GYMPPEYALRG-----FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 -----------~y~aPE~~~~~-----~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                 +|.+||.+...     ......|||+||++++.+++|..||........  ..|-|..+..+...    
T Consensus       174 g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~--~Y~~~~~w~~rk~~----  247 (378)
T KOG1345|consen  174 GTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDK--PYWEWEQWLKRKNP----  247 (378)
T ss_pred             CceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCc--hHHHHHHHhcccCc----
Confidence                       39999988643     356889999999999999999999974444443  33444445444333    


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                       .++....+  .++++.++-.+-+.+++++|.-..++.++-...
T Consensus       248 -~~P~~F~~--fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~  288 (378)
T KOG1345|consen  248 -ALPKKFNP--FSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCL  288 (378)
T ss_pred             -cCchhhcc--cCHHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence             22222222  566778888899999999997777776665543

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.81  E-value=6.1e-21  Score=164.73  Aligned_cols=147  Identities=22%  Similarity=0.245  Sum_probs=106.9

Q ss_pred             ceeeeecc---cccccccCC--CCCCCh-HHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            2 CKKLVYSK---LLDAANIDK--KRLLDW-QVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~--~~~l~~-~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      +.|+..|.   +|.++....  ...... ...+.++.|++.||++||+.+   |||||+||.|||++.            
T Consensus       577 F~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iS  653 (903)
T KOG1027|consen  577 FLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKIS  653 (903)
T ss_pred             eEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEec
Confidence            46777787   888884332  111111 345778999999999999988   999999999999975            


Q ss_pred             -------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhC-CCCCCcCCCCccchhhhhhhhh
Q 040682           64 -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG-KKSTAVYNTGSFNLLGHAWDLW  117 (216)
Q Consensus        64 -------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g-~~~~~~~~~~~~~~~~~~~~~~  117 (216)
                                               ||+|||++....-+.++||+|+||++|++++| .+||...-.-+.+.....    
T Consensus       654 DfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~----  729 (903)
T KOG1027|consen  654 DFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGN----  729 (903)
T ss_pred             ccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCc----
Confidence                                     39999999999888999999999999999986 788853322211111111    


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                                ..+.......++  ...+++.++++++|..||++.+|+.+
T Consensus       730 ----------~~L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  730 ----------YTLVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             ----------cceeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence                      111111122223  67899999999999999999999754

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=2.9e-20  Score=150.31  Aligned_cols=138  Identities=24%  Similarity=0.301  Sum_probs=111.0

Q ss_pred             eeeecc-ccccc--ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----------------
Q 040682            4 KLVYSK-LLDAA--NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------   63 (216)
Q Consensus         4 ~lV~Ey-~l~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----------------   63 (216)
                      |.|||| +..++  +..+-+.+.+..+..++.+|+.||-|||+++   ||.||+|..|||++.                 
T Consensus       426 yFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~  502 (683)
T KOG0696|consen  426 YFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIF  502 (683)
T ss_pred             eeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccccc
Confidence            789999 66665  4555667899999999999999999999999   999999999999986                 


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccc
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVIT  131 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (216)
                                  +|+|||.+...+|..++|-||||+++|||+.|++||++.++.+.  ++.+            .+.   
T Consensus       503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~el--F~aI------------~eh---  565 (683)
T KOG0696|consen  503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL--FQAI------------MEH---  565 (683)
T ss_pred             CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHH------------HHc---
Confidence                        39999999999999999999999999999999999987665432  1111            111   


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCCCH
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRPTM  161 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  161 (216)
                      ....+...+.+.+++....+...|++|..+
T Consensus       566 nvsyPKslSkEAv~ickg~ltK~P~kRLGc  595 (683)
T KOG0696|consen  566 NVSYPKSLSKEAVAICKGLLTKHPGKRLGC  595 (683)
T ss_pred             cCcCcccccHHHHHHHHHHhhcCCccccCC
Confidence            112233356677888888889999998654

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.81  E-value=4.3e-20  Score=138.98  Aligned_cols=159  Identities=18%  Similarity=0.206  Sum_probs=110.0

Q ss_pred             eeeeecc-cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-----------------
Q 040682            3 KKLVYSK-LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-----------------   64 (216)
Q Consensus         3 ~~lV~Ey-~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-----------------   64 (216)
                      +-||||| .=.++..-. ..++...+..++.+++.||.|+|++|   |+|||+||.|++++..                 
T Consensus       110 paLiFE~v~n~Dfk~ly-~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp  185 (338)
T KOG0668|consen  110 PSLIFEYVNNTDFKQLY-PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP  185 (338)
T ss_pred             chhHhhhhccccHHHHh-hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcCC
Confidence            4578888 222221111 23778888999999999999999999   9999999999999862                 


Q ss_pred             ------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccC------ccccc
Q 040682           65 ------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDD------RVHEL  125 (216)
Q Consensus        65 ------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  125 (216)
                                  |..||.+... .|+.+-|+|||||++..|+..+.||....+....++..+......+      +..-.
T Consensus       186 ~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~  265 (338)
T KOG0668|consen  186 GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID  265 (338)
T ss_pred             CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence                        7789988765 6889999999999999999999998877655433222211111000      00000


Q ss_pred             ccccc----------------ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          126 IDPVI----------------TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       126 ~~~~~----------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ++|..                ..+.... ...+.++++...+.+|-.+|+|++|+..
T Consensus       266 Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl-~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  266 LDPQFEDILGRHSRKPWSRFINSENQHL-VSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             CChhHhhHhhccccccHHHhCCcccccc-CChHHHHHHHHHHhhccccccchHHHhc
Confidence            11110                0011111 3467899999999999999999998864

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.81  E-value=1.6e-19  Score=153.81  Aligned_cols=100  Identities=26%  Similarity=0.373  Sum_probs=88.5

Q ss_pred             eeeeecc----ccccc--ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC------------
Q 040682            3 KKLVYSK----LLDAA--NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~------------   64 (216)
                      +.+||||    +|+.+  ...+..+|++.+.+.++.+++.||.|||+++   |+||||||.||++-.|            
T Consensus        92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDf  168 (732)
T KOG4250|consen   92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDF  168 (732)
T ss_pred             ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeecc
Confidence            6799999    77776  4566778999999999999999999999998   9999999999998542            


Q ss_pred             --------------------CCChhhhh-cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCC
Q 040682           65 --------------------YMPPEYAL-RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTG  105 (216)
Q Consensus        65 --------------------y~aPE~~~-~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~  105 (216)
                                          |.+||++. +..|+..+|.|||||++|+..||..||......
T Consensus       169 G~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p  230 (732)
T KOG4250|consen  169 GAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP  230 (732)
T ss_pred             cccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence                                99999999 478999999999999999999999998655444

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=2.8e-20  Score=143.39  Aligned_cols=166  Identities=19%  Similarity=0.193  Sum_probs=114.0

Q ss_pred             eeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC----------------
Q 040682            4 KLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------   64 (216)
Q Consensus         4 ~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~----------------   64 (216)
                      |.|.|.   .|..+ +-....++.+.++.+++||+.||.|||+.+   |.||||||.|+|++.+                
T Consensus       133 YV~TELmQSDLHKI-IVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~  208 (449)
T KOG0664|consen  133 YVLTELMQSDLHKI-IVSPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQ  208 (449)
T ss_pred             HHHHHHHHhhhhhe-eccCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccch
Confidence            455566   44444 556678999999999999999999999999   9999999999999874                


Q ss_pred             --------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-ch------------hhhhhhh
Q 040682           65 --------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NL------------LGHAWDL  116 (216)
Q Consensus        65 --------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~------------~~~~~~~  116 (216)
                                    |+|||.+.|. .|+.+.||||.||++.|++.++-.|......+. ..            ....-+.
T Consensus       209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG  288 (449)
T KOG0664|consen  209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG  288 (449)
T ss_pred             hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence                          9999999987 799999999999999999987777655443322 10            0111111


Q ss_pred             hccCccccccc-cccc---cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          117 WKDDRVHELID-PVIT---QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       117 ~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                      .+..-+..... |..+   ....+.....+.+.+....+..+|++|.+..+.+..+...+.
T Consensus       289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG  349 (449)
T ss_pred             hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence            11110111000 1100   001111133456778888899999999999999887765433

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.80  E-value=2.4e-20  Score=154.22  Aligned_cols=160  Identities=18%  Similarity=0.224  Sum_probs=117.4

Q ss_pred             eeecc---ccccc--ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            5 LVYSK---LLDAA--NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         5 lV~Ey---~l~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      ||||-   +|..+  .+...-+|....+..++.|+.-||..|-..+   |+|.||||.|||++.+               
T Consensus       511 lVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~  587 (752)
T KOG0670|consen  511 LVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGSASFA  587 (752)
T ss_pred             EEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCcccccc
Confidence            78887   77776  3344556899999999999999999999998   9999999999999873               


Q ss_pred             -------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhh--------h-------hh
Q 040682           65 -------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGH--------A-------WD  115 (216)
Q Consensus        65 -------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~--------~-------~~  115 (216)
                                   |.|||.+.|..|+...|+||.||+||||.||+..|.+...... .+...        .       -.
T Consensus       588 ~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dq  667 (752)
T KOG0670|consen  588 SENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQ  667 (752)
T ss_pred             ccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhh
Confidence                         9999999999999999999999999999999999887654332 00000        0       00


Q ss_pred             hhc---------cCc--------ccccccccc------c----cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          116 LWK---------DDR--------VHELIDPVI------T----QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       116 ~~~---------~~~--------~~~~~~~~~------~----~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .+.         ...        +...+.|+.      .    ..........++.+|+..|+..||++|.+..++|++
T Consensus       668 HFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H  746 (752)
T KOG0670|consen  668 HFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH  746 (752)
T ss_pred             hcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence            000         000        000111110      0    011222367789999999999999999999988764

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=3.9e-20  Score=152.61  Aligned_cols=139  Identities=20%  Similarity=0.255  Sum_probs=108.8

Q ss_pred             eeeecc--ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC----------------
Q 040682            4 KLVYSK--LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------   64 (216)
Q Consensus         4 ~lV~Ey--~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~----------------   64 (216)
                      ||+||-  ..+-| ..+.++.++..+.+.++..+.+|++|||+++   ||.||+||+|++++..                
T Consensus       496 YmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~  572 (732)
T KOG0614|consen  496 YMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS  572 (732)
T ss_pred             hhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence            666777  33334 4566778999999999999999999999999   9999999999999862                


Q ss_pred             ------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccccc
Q 040682           65 ------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQ  132 (216)
Q Consensus        65 ------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (216)
                                  |.|||.+.....+.++|.|++|+++|||++|.+||.+.+.+..      +..+         -..+..
T Consensus       573 g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmkt------Yn~I---------LkGid~  637 (732)
T KOG0614|consen  573 GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKT------YNLI---------LKGIDK  637 (732)
T ss_pred             CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHH------HHHH---------Hhhhhh
Confidence                        9999999999999999999999999999999999987766543      1111         011111


Q ss_pred             chhhHHHHHHHHHHHHhccccCCCCCCC
Q 040682          133 DEISLSMLMRYVKVALLCVQETVADRPT  160 (216)
Q Consensus       133 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps  160 (216)
                      -.++........+++.+-...+|.+|.-
T Consensus       638 i~~Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  638 IEFPRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence            2233335566777888777889999976

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.79  E-value=1.2e-19  Score=161.02  Aligned_cols=55  Identities=33%  Similarity=0.403  Sum_probs=47.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceee
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL   61 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~   61 (216)
                      .||||||    +|.++.. ..+.+++..++.++.||+.||+|||.++   |+||||||+|||+
T Consensus        79 ~~lVmEy~~g~~L~~li~-~~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl  137 (669)
T cd05610          79 VYLVMEYLIGGDVKSLLH-IYGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLI  137 (669)
T ss_pred             EEEEEeCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEE
Confidence            5899999    5666533 2346899999999999999999999998   9999999999987

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.78  E-value=1.2e-19  Score=152.43  Aligned_cols=142  Identities=22%  Similarity=0.255  Sum_probs=109.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      -|+||||    -+.+++..+ +.+.+..+..++.|+..|++|||+++   |+|||+|..|+|++.+              
T Consensus       130 lylV~eya~~ge~~~yl~~~-gr~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~  205 (596)
T KOG0586|consen  130 LYLVMEYASGGELFDYLVKH-GRMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFF  205 (596)
T ss_pred             eEEEEEeccCchhHHHHHhc-ccchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceee
Confidence            4899999    333443333 34566999999999999999999999   9999999999999862              


Q ss_pred             --------------CCChhhhhcCCCC-cchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           65 --------------YMPPEYALRGFFS-IKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        65 --------------y~aPE~~~~~~~~-~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    |.|||++.+..+. ..+|+|++|+++|-++.|..||++..-...                  -+..
T Consensus       206 ~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L------------------r~rv  267 (596)
T KOG0586|consen  206 DYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL------------------RPRV  267 (596)
T ss_pred             cccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc------------------cchh
Confidence                          9999999998765 789999999999999999999975443221                  1111


Q ss_pred             ccc-chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQ-DEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      +.. -..+......+.+++.+.+..+|.+|+++.++.+
T Consensus       268 l~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  268 LRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             eeeeecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence            100 1122224556788999999999999999998864

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.78  E-value=2e-19  Score=156.13  Aligned_cols=147  Identities=22%  Similarity=0.320  Sum_probs=115.2

Q ss_pred             eeeeecc----ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      -||||||    +.-++ ..-....+.|.-+..|++.++.||++||.+.   +||||||-.|||++..             
T Consensus        96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvDFGvSaQ  172 (953)
T KOG0587|consen   96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQ  172 (953)
T ss_pred             EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEeeeeeeee
Confidence            4999999    66665 3333567999999999999999999999987   9999999999999862             


Q ss_pred             ----------------CCChhhhhcC-----CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           65 ----------------YMPPEYALRG-----FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        65 ----------------y~aPE~~~~~-----~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                      |||||++.-.     .|+..+|+||+|++-.||.-|.+|+........              +-
T Consensus       173 ldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra--------------LF  238 (953)
T KOG0587|consen  173 LDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA--------------LF  238 (953)
T ss_pred             eecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh--------------hc
Confidence                            9999998633     578899999999999999999999753322211              11


Q ss_pred             ccc-ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          124 ELI-DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       124 ~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .+. +|.+. ...+..+.+++.+++..|+..|-.+||++.+++++
T Consensus       239 ~IpRNPPPk-Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  239 LIPRNPPPK-LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             cCCCCCCcc-ccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence            111 22222 23344589999999999999999999999888753

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.78  E-value=2e-19  Score=133.36  Aligned_cols=95  Identities=32%  Similarity=0.435  Sum_probs=81.8

Q ss_pred             eeeecc---ccccc---ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            4 KLVYSK---LLDAA---NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         4 ~lV~Ey---~l~~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      |+.||.   +|+.+   ...+.+.+++...-+|+..+..||.|||++=  .+||||+||+|||++..             
T Consensus       121 wIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~  198 (282)
T KOG0984|consen  121 WICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGY  198 (282)
T ss_pred             EEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEccccccee
Confidence            677777   77766   4556667899999999999999999999953  59999999999999862             


Q ss_pred             ---------------CCChhhhhcC----CCCcchhhhhHHHHHHHHHhCCCCCC
Q 040682           65 ---------------YMPPEYALRG----FFSIKSDVFSFGVLMLEILSGKKSTA  100 (216)
Q Consensus        65 ---------------y~aPE~~~~~----~~~~~~Dv~s~G~~l~ell~g~~~~~  100 (216)
                                     |+|||.+...    .|+.++||||+|+++.||.+++.|++
T Consensus       199 L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~  253 (282)
T KOG0984|consen  199 LVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE  253 (282)
T ss_pred             ehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence                           9999987633    79999999999999999999999964

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.78  E-value=7.1e-19  Score=150.27  Aligned_cols=134  Identities=22%  Similarity=0.281  Sum_probs=90.5

Q ss_pred             CChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------------------------CCCChhhh
Q 040682           22 LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------------GYMPPEYA   71 (216)
Q Consensus        22 l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------------------------~y~aPE~~   71 (216)
                      +++..++.++.|++.||.|||+.+   |+||||||+||+++.                              .|++||.+
T Consensus       306 ~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l  382 (507)
T PLN03224        306 RDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEEL  382 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhh
Confidence            567889999999999999999998   999999999999864                              28999987


Q ss_pred             hcCCC----------------------CcchhhhhHHHHHHHHHhCCC-CCCcCCCCccch-----hhhhhhhhccCccc
Q 040682           72 LRGFF----------------------SIKSDVFSFGVLMLEILSGKK-STAVYNTGSFNL-----LGHAWDLWKDDRVH  123 (216)
Q Consensus        72 ~~~~~----------------------~~~~Dv~s~G~~l~ell~g~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~  123 (216)
                      .....                      ....||||+||++++|+++.. |+..........     ....|.......  
T Consensus       383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~--  460 (507)
T PLN03224        383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK--  460 (507)
T ss_pred             cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC--
Confidence            64321                      124699999999999999875 553221111100     001111111110  


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCC---CCCCCHHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETV---ADRPTMSDVVSM  167 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p---~~Rps~~evl~~  167 (216)
                        .+.    ...+ .......+++.+++..+|   .+|+|+.|++++
T Consensus       461 --~~~----~~~d-~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H  500 (507)
T PLN03224        461 --YDF----SLLD-RNKEAGWDLACKLITKRDQANRGRLSVGQALSH  500 (507)
T ss_pred             --CCc----cccc-ccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence              011    1111 145678889999998765   689999998764

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.77  E-value=2.7e-18  Score=129.92  Aligned_cols=115  Identities=36%  Similarity=0.513  Sum_probs=100.0

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-C------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-G------------   64 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-~------------   64 (216)
                      ..++||||    +|..+.......+++..+..++.+++.++++||+.+   ++|+|++|.||+++. +            
T Consensus        65 ~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~  141 (215)
T cd00180          65 HLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSK  141 (215)
T ss_pred             eEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceE
Confidence            36899999    566654333356899999999999999999999998   999999999999987 2            


Q ss_pred             -----------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 -----------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 -----------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       |.+||..... ..+.+.|+|++|++++++                                  
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------  187 (215)
T cd00180         142 LLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------  187 (215)
T ss_pred             EccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------
Confidence                             7889988877 788999999999999988                                  


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                                    ..+.+++..|++.+|++||++.++++.
T Consensus       188 --------------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 --------------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             --------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence                          468899999999999999999998864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=8.5e-19  Score=143.04  Aligned_cols=148  Identities=28%  Similarity=0.380  Sum_probs=107.1

Q ss_pred             eeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC----------------
Q 040682            5 LVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------   64 (216)
Q Consensus         5 lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~----------------   64 (216)
                      -|+||    .|+.+ ....+.+++++++.|+.||+.||.||... .++|||-|+||.|||+..|                
T Consensus       545 TVLEYceGNDLDFY-LKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI  622 (775)
T KOG1151|consen  545 TVLEYCEGNDLDFY-LKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI  622 (775)
T ss_pred             eeeeecCCCchhHH-HHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence            37888    66666 44456799999999999999999999987 4899999999999998652                


Q ss_pred             -----------------------CCChhhhhcC----CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhh
Q 040682           65 -----------------------YMPPEYALRG----FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW  117 (216)
Q Consensus        65 -----------------------y~aPE~~~~~----~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~  117 (216)
                                             |++||.+.-.    .++.++||||.|+++|..+-|+.||...-... ..++.     
T Consensus       623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ-dILqe-----  696 (775)
T KOG1151|consen  623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ-DILQE-----  696 (775)
T ss_pred             ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH-HHHhh-----
Confidence                                   8999987633    58899999999999999999999986322211 11111     


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVV  165 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl  165 (216)
                        ..   ++..+....+..+..+.+..+|+.+||++.-++|...-++.
T Consensus       697 --NT---IlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  697 --NT---ILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             --hc---hhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence              11   11111111111112456788999999999999998765543

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=3.7e-19  Score=140.08  Aligned_cols=136  Identities=21%  Similarity=0.250  Sum_probs=106.6

Q ss_pred             eeecc-ccccc--ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-----------------
Q 040682            5 LVYSK-LLDAA--NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-----------------   64 (216)
Q Consensus         5 lV~Ey-~l~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-----------------   64 (216)
                      .|||| +...+  +..+.+.++++..+.+..+|..||.|||+++   |+.||+|.+|+|++.+                 
T Consensus       245 FVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~  321 (516)
T KOG0690|consen  245 FVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY  321 (516)
T ss_pred             EEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcccc
Confidence            58999 43333  5566778999999999999999999999999   9999999999999872                 


Q ss_pred             ------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccccc
Q 040682           65 ------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQ  132 (216)
Q Consensus        65 ------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (216)
                                  |.|||++....|..++|-|.+|+++|||++|+.||...+.+..               -+++-.  ..
T Consensus       322 g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL---------------FeLIl~--ed  384 (516)
T KOG0690|consen  322 GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL---------------FELILM--ED  384 (516)
T ss_pred             cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH---------------HHHHHh--hh
Confidence                        9999999999999999999999999999999999864433221               111100  00


Q ss_pred             chhhHHHHHHHHHHHHhccccCCCCCCC
Q 040682          133 DEISLSMLMRYVKVALLCVQETVADRPT  160 (216)
Q Consensus       133 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps  160 (216)
                      ...+...+.+...++...|..||.+|..
T Consensus       385 ~kFPr~ls~eAktLLsGLL~kdP~kRLG  412 (516)
T KOG0690|consen  385 LKFPRTLSPEAKTLLSGLLKKDPKKRLG  412 (516)
T ss_pred             ccCCccCCHHHHHHHHHHhhcChHhhcC
Confidence            1112224556788999999999999963

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=1.6e-18  Score=154.08  Aligned_cols=148  Identities=21%  Similarity=0.174  Sum_probs=106.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      -||||||    +|-.+..... .++++-++.|+..|.-||.-||+.|   +|||||||.|||++.               
T Consensus       150 LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGsClkm  225 (1317)
T KOG0612|consen  150 LYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGSCLKM  225 (1317)
T ss_pred             eEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchhHHhc
Confidence            3899999    3333333333 6999999999999999999999999   999999999999986               


Q ss_pred             ---------------CCCChhhhhc-----CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 ---------------GYMPPEYALR-----GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 ---------------~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                     +|.+||++..     +.|...+|-||+||++|||+.|..||....-.+     ........+   
T Consensus       226 ~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslve-----TY~KIm~hk---  297 (1317)
T KOG0612|consen  226 DADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVE-----TYGKIMNHK---  297 (1317)
T ss_pred             CCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHH-----HHHHHhchh---
Confidence                           3999999863     468899999999999999999999985332111     111111111   


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCC---HHHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPT---MSDVVSMI  168 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps---~~evl~~L  168 (216)
                      +.+..     +...+.+++..+|+.+-+. +|+.|..   +.++..+-
T Consensus       298 ~~l~F-----P~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp  339 (1317)
T KOG0612|consen  298 ESLSF-----PDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP  339 (1317)
T ss_pred             hhcCC-----CcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence            11111     1112256677788777664 6777877   88777553

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.74  E-value=4.5e-18  Score=123.95  Aligned_cols=160  Identities=20%  Similarity=0.254  Sum_probs=109.7

Q ss_pred             eeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC----------------
Q 040682            4 KLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------   64 (216)
Q Consensus         4 ~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~----------------   64 (216)
                      -|||||   .|..+...-.+.++...+++++.|++.||.|+|+++   +.|||+||.|+|++.+                
T Consensus        77 tlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgi  153 (292)
T KOG0662|consen   77 TLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGI  153 (292)
T ss_pred             EEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCC
Confidence            378999   777775556677999999999999999999999999   9999999999999873                


Q ss_pred             -------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhh--hccCccccc--
Q 040682           65 -------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDL--WKDDRVHEL--  125 (216)
Q Consensus        65 -------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--  125 (216)
                                   |.+|.++.+. -|+++.|+||-||++.|+.. |++.|.+.+.... +....+..  ...+.+..+  
T Consensus       154 pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddq-lkrif~~lg~p~ed~wps~t~  232 (292)
T KOG0662|consen  154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ-LKRIFRLLGTPTEDQWPSMTK  232 (292)
T ss_pred             ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH-HHHHHHHhCCCccccCCcccc
Confidence                         8999999987 58899999999999999987 5555654443222 11111111  111122111  


Q ss_pred             -cc----cccccc-hhh---HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          126 -ID----PVITQD-EIS---LSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       126 -~~----~~~~~~-~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       .|    |..+.. .+.   ......-.+++..-+.-+|.+|.++...+++
T Consensus       233 lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh  283 (292)
T KOG0662|consen  233 LPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH  283 (292)
T ss_pred             CCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence             11    111110 011   1122334677777777789999999877653

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.73  E-value=4.5e-19  Score=147.18  Aligned_cols=146  Identities=23%  Similarity=0.264  Sum_probs=116.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      -|.|||-    -|+-++...++.|++...+.++.||+.||.|||.++   |+|+|+||+|||+..               
T Consensus       638 vFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfA  714 (888)
T KOG4236|consen  638 VFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFA  714 (888)
T ss_pred             EEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccce
Confidence            3788998    445556777888999999999999999999999999   999999999999975               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|.|||++..+.|+.+-|+||.|+++|.-++|.-||....+..        +.+++.      .
T Consensus       715 RiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn--------dQIQNA------a  780 (888)
T KOG4236|consen  715 RIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN--------DQIQNA------A  780 (888)
T ss_pred             eecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh--------HHhhcc------c
Confidence                            2999999999999999999999999999999999985332211        111111      1


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ...+..++.+ ..+..++++..-|+..-.+|-|..+.+.
T Consensus       781 FMyPp~PW~e-is~~AidlIn~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  781 FMYPPNPWSE-ISPEAIDLINNLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             cccCCCchhh-cCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence            2223444554 7778899999999988889988877653

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=9.8e-18  Score=132.74  Aligned_cols=144  Identities=22%  Similarity=0.307  Sum_probs=109.6

Q ss_pred             eeeecc-ccccc--ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----------------
Q 040682            4 KLVYSK-LLDAA--NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------   63 (216)
Q Consensus         4 ~lV~Ey-~l~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----------------   63 (216)
                      |.|.|| +..++  +...++.++++.++.+..+|+-||.|||++|   ||.||+|..|+|++.                 
T Consensus       327 ffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l~  403 (593)
T KOG0695|consen  327 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG  403 (593)
T ss_pred             EEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCCC
Confidence            678899 65565  4556678999999999999999999999999   999999999999985                 


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc--chhhhhhhhhccCccccccccc
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF--NLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                  +|.|||.+.+..|..+.|-|++|++++||+.|+.||+.-.....  +......+.+-.+++.      
T Consensus       404 ~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir------  477 (593)
T KOG0695|consen  404 PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR------  477 (593)
T ss_pred             CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc------
Confidence                        39999999999999999999999999999999999976543222  2222222222222111      


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTM  161 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  161 (216)
                           .+...+-+...++...+++||.+|..+
T Consensus       478 -----iprslsvkas~vlkgflnkdp~erlgc  504 (593)
T KOG0695|consen  478 -----IPRSLSVKASHVLKGFLNKDPKERLGC  504 (593)
T ss_pred             -----ccceeehhhHHHHHHhhcCCcHHhcCC
Confidence                 111133345667788899999988643

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.73  E-value=5.1e-18  Score=137.07  Aligned_cols=158  Identities=22%  Similarity=0.229  Sum_probs=111.7

Q ss_pred             eeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            4 KLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .+|+||    ...++.    ..++..++..+++.+..||+++|++|   ||||||||+|+|.+.                
T Consensus       111 ~ivlp~~~H~~f~~l~----~~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~  183 (418)
T KOG1167|consen  111 AIVLPYFEHDRFRDLY----RSLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY  183 (418)
T ss_pred             EEEecccCccCHHHHH----hcCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhHHHH
Confidence            578888    333332    23679999999999999999999999   999999999999875                


Q ss_pred             ----------------------------------------------------------CCCChhhhhcC-CCCcchhhhh
Q 040682           64 ----------------------------------------------------------GYMPPEYALRG-FFSIKSDVFS   84 (216)
Q Consensus        64 ----------------------------------------------------------~y~aPE~~~~~-~~~~~~Dv~s   84 (216)
                                                                                ||+|||++..- ..++++||||
T Consensus       184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws  263 (418)
T KOG1167|consen  184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS  263 (418)
T ss_pred             HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence                                                                      39999999876 5788999999


Q ss_pred             HHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc---------cCc--ccc--------------------ccccc----
Q 040682           85 FGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK---------DDR--VHE--------------------LIDPV----  129 (216)
Q Consensus        85 ~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~--------------------~~~~~----  129 (216)
                      -|+++.-+++++.||...........+.+.....         .+.  +.+                    .+.+.    
T Consensus       264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n  343 (418)
T KOG1167|consen  264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN  343 (418)
T ss_pred             ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence            9999999999999987766544322211110000         000  000                    00000    


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                      ..........+.-+++++.+|+..+|.+|.+++++|++-
T Consensus       344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp  382 (418)
T KOG1167|consen  344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHP  382 (418)
T ss_pred             eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCc
Confidence            011112222344689999999999999999999988654

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.71  E-value=2.2e-17  Score=127.41  Aligned_cols=147  Identities=20%  Similarity=0.262  Sum_probs=113.2

Q ss_pred             cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC------------------------
Q 040682           10 LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------------------   64 (216)
Q Consensus        10 ~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~------------------------   64 (216)
                      +|+.++.. ..-.++..|+.+++.+++.|++|||+-. +.|....+.+..++++++                        
T Consensus       273 slynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pa  351 (448)
T KOG0195|consen  273 SLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPA  351 (448)
T ss_pred             HHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeeeeccccccCcc
Confidence            77776333 3334788899999999999999999974 445555678888888862                        


Q ss_pred             CCChhhhhcCCC---CcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHH
Q 040682           65 YMPPEYALRGFF---SIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLM  141 (216)
Q Consensus        65 y~aPE~~~~~~~---~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (216)
                      |++||.+...+-   -.++|+|||++++||+.|+..||.....+++.          .+...+.+++.+++.     .+.
T Consensus       352 wmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg----------mkialeglrv~ippg-----is~  416 (448)
T KOG0195|consen  352 WMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG----------MKIALEGLRVHIPPG-----ISR  416 (448)
T ss_pred             cCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh----------hhhhhccccccCCCC-----ccH
Confidence            999999987643   36889999999999999999999876665541          111223445555444     566


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          142 RYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       142 ~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      .+.+++.-|++.||.+||.+..|+-.|+++.
T Consensus       417 hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  417 HMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             HHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            7899999999999999999999999998763

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.71  E-value=2.4e-17  Score=139.47  Aligned_cols=103  Identities=23%  Similarity=0.342  Sum_probs=88.7

Q ss_pred             ceeeeecc-ccccc--ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            2 CKKLVYSK-LLDAA--NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         2 ~~~lV~Ey-~l~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      |-|.|||| -..+.  +.-+.+-|.+..++.++.++..|++++|..|   .|||||||.|||||.               
T Consensus       703 nLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGf  779 (1034)
T KOG0608|consen  703 NLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF  779 (1034)
T ss_pred             ceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccc
Confidence            45899999 22222  3444567899999999999999999999999   999999999999986               


Q ss_pred             --------------------------------------------------------CCCChhhhhcCCCCcchhhhhHHH
Q 040682           64 --------------------------------------------------------GYMPPEYALRGFFSIKSDVFSFGV   87 (216)
Q Consensus        64 --------------------------------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~   87 (216)
                                                                              +|+|||++....++..+|-|+.|+
T Consensus       780 RWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gv  859 (1034)
T KOG0608|consen  780 RWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGV  859 (1034)
T ss_pred             eeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhH
Confidence                                                                    299999999999999999999999


Q ss_pred             HHHHHHhCCCCCCcCCCCcc
Q 040682           88 LMLEILSGKKSTAVYNTGSF  107 (216)
Q Consensus        88 ~l~ell~g~~~~~~~~~~~~  107 (216)
                      +||||+.|++||......+.
T Consensus       860 il~em~~g~~pf~~~tp~~t  879 (1034)
T KOG0608|consen  860 ILYEMLVGQPPFLADTPGET  879 (1034)
T ss_pred             HHHHHhhCCCCccCCCCCcc
Confidence            99999999999976655443

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.62  E-value=3.3e-15  Score=125.66  Aligned_cols=163  Identities=23%  Similarity=0.275  Sum_probs=122.9

Q ss_pred             eeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            4 KLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      +.|-+|    +|.+........+++.-...++++++.||+|+|+-.  ...|+.++.+|++++..               
T Consensus        23 ~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~  100 (484)
T KOG1023|consen   23 IVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALKSSNCLVDSRWVLKLTDFGLNSLLE  100 (484)
T ss_pred             EEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeeccccceeeeeEEEEechhhhccccc
Confidence            456777    888886667778999999999999999999999854  23999999999999862               


Q ss_pred             ----------------CCChhhhhcC---C----CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           65 ----------------YMPPEYALRG---F----FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        65 ----------------y~aPE~~~~~---~----~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                      |.|||.+.+.   .    .+.++||||||++++|+++.+.||......... .+.+.. .+. .
T Consensus       101 ~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~-~~~-~  177 (484)
T KOG1023|consen  101 ETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP-DEIILR-VKK-G  177 (484)
T ss_pred             ccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCCh-HHHHHH-HHh-c
Confidence                            8999998864   1    467899999999999999999999765544432 111111 111 1


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                      ....+.|.+....   +....+..++..||..+|..||++.+|...++.....
T Consensus       178 ~~~~~rP~i~~~~---e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  178 GSNPFRPSIELLN---ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             CCCCcCcchhhhh---hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence            2233344443221   3455789999999999999999999999998876443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.61  E-value=5e-16  Score=135.45  Aligned_cols=150  Identities=17%  Similarity=0.228  Sum_probs=110.7

Q ss_pred             eecc-cccccc-cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------------
Q 040682            6 VYSK-LLDAAN-IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------------   63 (216)
Q Consensus         6 V~Ey-~l~~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------------   63 (216)
                      +||| .-+.+. ....+.++...+-.++.|++.|+.|+|+.|   +.|||+|+.|++++.                    
T Consensus       399 ~mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e  475 (601)
T KOG0590|consen  399 SMEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE  475 (601)
T ss_pred             hhhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence            3788 223332 222347899999999999999999999999   999999999999976                    


Q ss_pred             -------------CCCChhhhhcCCCC-cchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 -------------GYMPPEYALRGFFS-IKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~-~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                   .|.|||++.+..|+ ...||||.|+++..|.+|+.||.........+.....        .......
T Consensus       476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~--------~~~~~~~  547 (601)
T KOG0590|consen  476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY--------SDQRNIF  547 (601)
T ss_pred             hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc--------ccccccc
Confidence                         29999999999987 4669999999999999999998766555432200000        0000111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ..........+.+...++.++++.+|.+|.++.+|++
T Consensus       548 ~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  548 EGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             cChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            1112222335677889999999999999999999974

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.59  E-value=1.5e-15  Score=129.06  Aligned_cols=147  Identities=21%  Similarity=0.237  Sum_probs=110.8

Q ss_pred             eeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            4 KLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      |++|||    +|.+. ....+++++.++..+.++.++||.|||+++   -+|||||-.|||+++.               
T Consensus        88 wicMEycgggslQdi-y~~TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqit  163 (829)
T KOG0576|consen   88 WICMEYCGGGSLQDI-YHVTGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQIT  163 (829)
T ss_pred             EEEEEecCCCcccce-eeecccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhh
Confidence            899999    66666 455678999999999999999999999998   8999999999999762               


Q ss_pred             --------------CCChhhhh---cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           65 --------------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        65 --------------y~aPE~~~---~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                    |+|||+..   ...|...+|||+.|++-.|+---++|.......+..+..-          ...++
T Consensus       164 ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmT----------kS~~q  233 (829)
T KOG0576|consen  164 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMT----------KSGFQ  233 (829)
T ss_pred             hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhh----------ccCCC
Confidence                          99999864   4579999999999999999987777754333322111100          11111


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      |  +.......+.+.+-+|+..|+-.+|.+||++..+++
T Consensus       234 p--p~lkDk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  234 P--PTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             C--CcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            1  111222236777889999999999999999987654

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.59  E-value=5e-15  Score=113.79  Aligned_cols=96  Identities=31%  Similarity=0.350  Sum_probs=81.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++.......+++..+..++.+++.+|.+||..+   ++|+|+++.||+++.               
T Consensus        72 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~  148 (225)
T smart00221       72 LYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFI  148 (225)
T ss_pred             eEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEe
Confidence            5789999    566663333322899999999999999999999998   999999999999985               


Q ss_pred             ---------------CCCChhhh-hcCCCCcchhhhhHHHHHHHHHhCCCCCCc
Q 040682           64 ---------------GYMPPEYA-LRGFFSIKSDVFSFGVLMLEILSGKKSTAV  101 (216)
Q Consensus        64 ---------------~y~aPE~~-~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~  101 (216)
                                     .|++||.+ ....++.++|+|+||++++++++|+.||..
T Consensus       149 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      149 HRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             cCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence                           18899988 556778899999999999999999999854

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.55  E-value=4.2e-15  Score=132.51  Aligned_cols=147  Identities=20%  Similarity=0.244  Sum_probs=103.4

Q ss_pred             eeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----------------
Q 040682            4 KLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------   63 (216)
Q Consensus         4 ~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----------------   63 (216)
                      |||-+|   +|+|. ...+-.+...+.+=|+-|++.||.-+|..|   |.|+|||.+|||++.                 
T Consensus        97 ylvRqyvkhnLyDR-lSTRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYL  172 (1431)
T KOG1240|consen   97 YLVRQYVKHNLYDR-LSTRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYL  172 (1431)
T ss_pred             HHHHHHHhhhhhhh-hccchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccC
Confidence            566677   66665 233335777888889999999999999999   999999999999975                 


Q ss_pred             -------------------CCCChhhhhcC----------C-CCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhh
Q 040682           64 -------------------GYMPPEYALRG----------F-FSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGH  112 (216)
Q Consensus        64 -------------------~y~aPE~~~~~----------~-~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~  112 (216)
                                         -|.|||.+...          . .+.+-||||.||++.|+++ |+++|..        .+.
T Consensus       173 PeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L--------SQL  244 (1431)
T KOG1240|consen  173 PEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL--------SQL  244 (1431)
T ss_pred             CCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH--------HHH
Confidence                               19999988642          1 5678899999999999987 5666631        100


Q ss_pred             hhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          113 AWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                          +.-+... ..++....+..+   ...+..+++.|++.||++|.++.+.|+.-++
T Consensus       245 ----~aYr~~~-~~~~e~~Le~Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG  294 (1431)
T KOG1240|consen  245 ----LAYRSGN-ADDPEQLLEKIE---DVSLRNLILSMIQRDPSKRLSAEDYLQKYRG  294 (1431)
T ss_pred             ----HhHhccC-ccCHHHHHHhCc---CccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence                0000000 001100001111   1247889999999999999999999887554

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.51  E-value=1.1e-14  Score=122.40  Aligned_cols=94  Identities=26%  Similarity=0.369  Sum_probs=80.6

Q ss_pred             eeeeecc---ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK---LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||+||-   .++.+ .+..+..+++.+++.|++||+.|+++||+++   |||||||-+|+.++.               
T Consensus       644 yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfgsaa~~  720 (772)
T KOG1152|consen  644 YYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFGSAAYT  720 (772)
T ss_pred             eEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeeccchhhh
Confidence            5788888   43333 3455567999999999999999999999999   999999999999876               


Q ss_pred             ------------CCCChhhhhcCCCC-cchhhhhHHHHHHHHHhCCCCC
Q 040682           64 ------------GYMPPEYALRGFFS-IKSDVFSFGVLMLEILSGKKST   99 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~-~~~Dv~s~G~~l~ell~g~~~~   99 (216)
                                  +|.|||++.|..|- ...|||++|+++|-++....|+
T Consensus       721 ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy  769 (772)
T KOG1152|consen  721 KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY  769 (772)
T ss_pred             cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence                        39999999998875 6679999999999998887775

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.45  E-value=2.2e-13  Score=108.19  Aligned_cols=113  Identities=19%  Similarity=0.329  Sum_probs=81.3

Q ss_pred             CChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------------------CCChhhhhcC-
Q 040682           22 LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------------------YMPPEYALRG-   74 (216)
Q Consensus        22 l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------------------y~aPE~~~~~-   74 (216)
                      +....++.+..|++..+++||+.|   ++|+||||+|++++.+                          |.+||..... 
T Consensus       142 l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~  218 (288)
T PF14531_consen  142 LAFAARLSLTVQMIRLVANLHSYG---LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAG  218 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcc---eEecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhc
Confidence            445566678899999999999999   9999999999999872                          8899977542 


Q ss_pred             -------CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHH
Q 040682           75 -------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA  147 (216)
Q Consensus        75 -------~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  147 (216)
                             .++.+.|.|++|+++|.+.++..||...........                  ...  .+. +.++.+..++
T Consensus       219 ~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------------------~f~--~C~-~~Pe~v~~LI  277 (288)
T PF14531_consen  219 QFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------------------DFS--RCR-DMPEPVQFLI  277 (288)
T ss_dssp             SCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------------------GGT--TSS----HHHHHHH
T ss_pred             ccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------------------cch--hcC-CcCHHHHHHH
Confidence                   578999999999999999999999864432221100                  111  122 3788899999


Q ss_pred             HhccccCCCCC
Q 040682          148 LLCVQETVADR  158 (216)
Q Consensus       148 ~~cl~~~p~~R  158 (216)
                      ...|+.+|.+|
T Consensus       278 ~~lL~~~~~~R  288 (288)
T PF14531_consen  278 RGLLQRNPEDR  288 (288)
T ss_dssp             HHHT-SSGGGS
T ss_pred             HHHccCCcccC
Confidence            99999999987

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.44  E-value=9.1e-13  Score=107.66  Aligned_cols=155  Identities=17%  Similarity=0.143  Sum_probs=109.9

Q ss_pred             ceeeeecc---cccccccCC-CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            2 CKKLVYSK---LLDAANIDK-KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      +.||||+.   +|.++.... .+.++..++..++.|++.+|.+||+.|   ++||||||.|+++...             
T Consensus        95 ~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDf  171 (322)
T KOG1164|consen   95 FNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDF  171 (322)
T ss_pred             eeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEec
Confidence            57999999   888884333 478999999999999999999999999   9999999999998531             


Q ss_pred             -------------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhh
Q 040682           65 -------------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHA  113 (216)
Q Consensus        65 -------------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~  113 (216)
                                                     |.++....+.+.+.+.|+||++.++.+++.|..||........  ....
T Consensus       172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~--~~~~  249 (322)
T KOG1164|consen  172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL--KSKF  249 (322)
T ss_pred             CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch--HHHH
Confidence                                           5555555566778999999999999999999999854433221  0000


Q ss_pred             hhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          114 WDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ....    .......      .....+..+.++...+-..+...+|....+...|+..
T Consensus       250 ~~~~----~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~  297 (322)
T KOG1164|consen  250 EKDP----RKLLTDR------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDV  297 (322)
T ss_pred             HHHh----hhhcccc------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence            0000    0000000      0000234455666666668899999999998887764

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.42  E-value=1.3e-13  Score=114.82  Aligned_cols=138  Identities=21%  Similarity=0.282  Sum_probs=99.4

Q ss_pred             ceeeeecc----ccccccc--CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-----------
Q 040682            2 CKKLVYSK----LLDAANI--DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-----------   64 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-----------   64 (216)
                      +.|+.|++    +|++|+.  +.....++...+.++.|++.|+.|   ++   .+|+|+||.||....+           
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhe
Confidence            46788888    9999953  334457888999999999999999   66   9999999999987541           


Q ss_pred             ------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhcc
Q 040682           65 ------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKD  119 (216)
Q Consensus        65 ------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~  119 (216)
                                              |++||.+.+..|+.++|||++|++++|++. -...+..                 .
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er-----------------~  466 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER-----------------I  466 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-----------------H
Confidence                                    999999999999999999999999999997 2222110                 0


Q ss_pred             CccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHH
Q 040682          120 DRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDV  164 (216)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev  164 (216)
                      +.+..+-+..+++....  ..+.-+.|+.+.+.+.|.+||++.++
T Consensus       467 ~t~~d~r~g~ip~~~~~--d~p~e~~ll~~lls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  467 ATLTDIRDGIIPPEFLQ--DYPEEYTLLQQLLSPSPEERPSAIEV  509 (516)
T ss_pred             HhhhhhhcCCCChHHhh--cCcHHHHHHHHhcCCCcccCchHHHH
Confidence            00111111111111111  12334689999999999999966554

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.41  E-value=1.1e-12  Score=106.48  Aligned_cols=146  Identities=20%  Similarity=0.205  Sum_probs=102.8

Q ss_pred             eeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----------------
Q 040682            4 KLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------   63 (216)
Q Consensus         4 ~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----------------   63 (216)
                      |+||.-   +|..+...  +..+.....-++.|+++|+.|||.++   |.|||+|+.|||+.-                 
T Consensus       319 ylvMkrY~~tLr~yl~~--~~~s~r~~~~~laQlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  319 YLVMKRYRQTLREYLWT--RHRSYRTGRVILAQLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCL  393 (598)
T ss_pred             EEehhcchhhHHHHHhc--CCCchHHHHHHHHHHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceee
Confidence            667764   77776333  23577788889999999999999999   999999999999842                 


Q ss_pred             ----------------------CCCChhhhhcCC------CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh
Q 040682           64 ----------------------GYMPPEYALRGF------FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD  115 (216)
Q Consensus        64 ----------------------~y~aPE~~~~~~------~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~  115 (216)
                                            .-+|||+....+      --.++|.|+.|.+-||++....||......-.+..     
T Consensus       394 Ad~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r-----  468 (598)
T KOG4158|consen  394 ADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR-----  468 (598)
T ss_pred             eccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh-----
Confidence                                  168899876432      23689999999999999999999975332221111     


Q ss_pred             hhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          116 LWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                           ...+.--|.++     ..++..+.+++...++.||++|++..-....|+
T Consensus       469 -----~Yqe~qLPalp-----~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~  512 (598)
T KOG4158|consen  469 -----TYQESQLPALP-----SRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN  512 (598)
T ss_pred             -----hhhhhhCCCCc-----ccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence                 11111112222     124556778888899999999999755444443

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.32  E-value=2.3e-11  Score=97.42  Aligned_cols=155  Identities=26%  Similarity=0.296  Sum_probs=107.8

Q ss_pred             eeeecc----cccccccCCC--CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            4 KLVYSK----LLDAANIDKK--RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      ++++||    .+.++.....  ..+.......++.|++.++.|+|+.+   ++|||+||.||+++.              
T Consensus        74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~  150 (384)
T COG0515          74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAK  150 (384)
T ss_pred             EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcce
Confidence            788888    4443322222  36899999999999999999999998   999999999999864              


Q ss_pred             ----------------------CCCChhhhhc---CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCC--ccchhhhhhhh
Q 040682           64 ----------------------GYMPPEYALR---GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTG--SFNLLGHAWDL  116 (216)
Q Consensus        64 ----------------------~y~aPE~~~~---~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~--~~~~~~~~~~~  116 (216)
                                            .|++||...+   .......|+|++|++++++++|..|+......  ...........
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  230 (384)
T COG0515         151 LLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL  230 (384)
T ss_pred             ecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhc
Confidence                                  1889999987   57889999999999999999999996544431  11111111111


Q ss_pred             hccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          117 WKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ... ...........     ......+.+++..|+..+|..|.+..+....
T Consensus       231 ~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         231 PTP-SLASPLSPSNP-----ELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             CCc-ccccccCcccc-----chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            100 00000000000     1134568899999999999999998876654

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.22  E-value=9.5e-12  Score=94.92  Aligned_cols=155  Identities=15%  Similarity=0.206  Sum_probs=106.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      ..||||.   +|+++.....+.++.++++-.+-|++.-++|+|.++   .|||||||.|+|+.-+               
T Consensus        86 nvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK  162 (341)
T KOG1163|consen   86 NVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK  162 (341)
T ss_pred             ceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchh
Confidence            3689999   999997777788999999999999999999999999   9999999999998652               


Q ss_pred             ------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccC
Q 040682           65 ------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDD  120 (216)
Q Consensus        65 ------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~  120 (216)
                                              |.+-....+.+.+...|+=|+|.++..+..|..||.+......   ...++.+.+.
T Consensus       163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk---~QKyEkI~Ek  239 (341)
T KOG1163|consen  163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK---KQKYEKISEK  239 (341)
T ss_pred             hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH---HHHHHHHHHh
Confidence                                    5554444555677899999999999999999999866543322   1111111111


Q ss_pred             ccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          121 RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      ++...++. +...     .+.++.-.+.-|-..--++-|.-.=+.+.+.
T Consensus       240 K~s~~ie~-LC~G-----~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr  282 (341)
T KOG1163|consen  240 KMSTPIEV-LCKG-----FPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR  282 (341)
T ss_pred             hcCCCHHH-HhCC-----CcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence            11111111 1111     2445666666677666666666544444443

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.19  E-value=4.1e-11  Score=95.30  Aligned_cols=98  Identities=22%  Similarity=0.237  Sum_probs=85.1

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      ..||+|.   +|+|+..-..+.|+.+++.-++.|++.-++|+|++.   +|.|||||.|+||...               
T Consensus        99 NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGm  175 (449)
T KOG1165|consen   99 NILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGM  175 (449)
T ss_pred             hhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccc
Confidence            3589999   999996666677999999999999999999999998   9999999999999751               


Q ss_pred             --------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCC
Q 040682           65 --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN  103 (216)
Q Consensus        65 --------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~  103 (216)
                                                ||+-..-.+.+.+...|+=|+|-++...|.|..||.+..
T Consensus       176 AK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK  240 (449)
T KOG1165|consen  176 AKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  240 (449)
T ss_pred             hhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence                                      555555567778899999999999999999999986654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.12  E-value=3.3e-11  Score=107.73  Aligned_cols=110  Identities=24%  Similarity=0.334  Sum_probs=81.7

Q ss_pred             HHHHHHhhhcCCCCCeecCCCCCCceeecC--------------------------------------------CCCChh
Q 040682           34 IAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------------------------------------GYMPPE   69 (216)
Q Consensus        34 i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------------------------------------~y~aPE   69 (216)
                      ++.+++|||+.+   |+|||+||.|.+++.                                            -|.|||
T Consensus       152 mvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPe  228 (1205)
T KOG0606|consen  152 MVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPE  228 (1205)
T ss_pred             hhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChh
Confidence            377899999998   999999999999975                                            199999


Q ss_pred             hhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHh
Q 040682           70 YALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALL  149 (216)
Q Consensus        70 ~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  149 (216)
                      ++....|.+.+|-|++|+++||.+.|..||++.-.++.  +..+....  ..+.         +. +.....+..+++.+
T Consensus       229 VilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel--fg~visd~--i~wp---------E~-dea~p~Ea~dli~~  294 (1205)
T KOG0606|consen  229 VILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL--FGQVISDD--IEWP---------EE-DEALPPEAQDLIEQ  294 (1205)
T ss_pred             hhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH--Hhhhhhhh--cccc---------cc-CcCCCHHHHHHHHH
Confidence            99999999999999999999999999999986543331  11110000  0000         11 11134567888888


Q ss_pred             ccccCCCCCCC
Q 040682          150 CVQETVADRPT  160 (216)
Q Consensus       150 cl~~~p~~Rps  160 (216)
                      -|+.+|.+|--
T Consensus       295 LL~qnp~~Rlg  305 (1205)
T KOG0606|consen  295 LLRQNPLCRLG  305 (1205)
T ss_pred             HHHhChHhhcc
Confidence            89999999854

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.04  E-value=1.7e-09  Score=97.85  Aligned_cols=92  Identities=22%  Similarity=0.161  Sum_probs=81.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .+||+||    +|-++.. ..+.+++..+..+..|++.-++.||..+   |||+||||.|+|+..               
T Consensus       769 S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lID  844 (974)
T KOG1166|consen  769 SVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLID  844 (974)
T ss_pred             ceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEe
Confidence            4789999    5656533 6678999999999999999999999998   999999999999854               


Q ss_pred             -----------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCC
Q 040682           64 -----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS   98 (216)
Q Consensus        64 -----------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~   98 (216)
                                             .+-++|+..|..++...|-|.++.+++-||.|+..
T Consensus       845 fG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  845 FGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM  902 (974)
T ss_pred             cccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence                                   27889999999999999999999999999999864

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.03  E-value=3.7e-10  Score=96.25  Aligned_cols=120  Identities=23%  Similarity=0.254  Sum_probs=91.4

Q ss_pred             cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------------------CCChhh
Q 040682           16 IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------------------YMPPEY   70 (216)
Q Consensus        16 ~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------------------y~aPE~   70 (216)
                      ..+...+++.....+...++-|++++|+.+   +++||+|++||+++..                         |+|||+
T Consensus        88 l~~~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymApEI  164 (612)
T KOG0603|consen   88 LSKEVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRAPEI  164 (612)
T ss_pred             cccCCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhhhhHh
Confidence            344556788888899999999999999998   9999999999999762                         999999


Q ss_pred             hhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhc
Q 040682           71 ALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLC  150 (216)
Q Consensus        71 ~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  150 (216)
                      ..  ....+.|-|+||++.+|+++|..||..         ..         ...++..   ....+.+......+++...
T Consensus       165 ~~--gh~~a~D~ws~gvl~felltg~~pf~~---------~~---------~~~Il~~---~~~~p~~l~~~a~~~~~~l  221 (612)
T KOG0603|consen  165 IN--GHLSAADWWSFGVLAFELLTGTLPFGG---------DT---------MKRILKA---ELEMPRELSAEARSLFRQL  221 (612)
T ss_pred             hh--ccCCcccchhhhhhHHHHhhCCCCCch---------HH---------HHHHhhh---ccCCchhhhHHHHHHHHHH
Confidence            88  567889999999999999999999864         00         0011100   1123333556667777788


Q ss_pred             cccCCCCCCCH
Q 040682          151 VQETVADRPTM  161 (216)
Q Consensus       151 l~~~p~~Rps~  161 (216)
                      +..+|..|.-.
T Consensus       222 ~~r~p~nrLg~  232 (612)
T KOG0603|consen  222 FKRNPENRLGA  232 (612)
T ss_pred             HhhCHHHHhcc
Confidence            88888888655

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.97  E-value=5.6e-10  Score=84.45  Aligned_cols=57  Identities=21%  Similarity=0.156  Sum_probs=46.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhh-hcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYL-HQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~iiH~dik~~nil~~~   63 (216)
                      .+|||||    ++... ......++..++..++.|++.+|.++ |+.+   |+|||+||+||+++.
T Consensus        92 ~~iVmE~i~g~~l~~~-~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~~  153 (190)
T cd05147          92 HVLVMEFIGDDGWAAP-RLKDAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYHD  153 (190)
T ss_pred             CEEEEEEeCCCCCcch-hhhcCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEEC
Confidence            3799999    22222 12345789999999999999999999 6888   999999999999974

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.94  E-value=3.3e-10  Score=87.59  Aligned_cols=79  Identities=15%  Similarity=0.222  Sum_probs=56.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC------C------C
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------Y------M   66 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~------y------~   66 (216)
                      .+|||||    +|.++.     .++.    ....+++.+|..+|..+   ++|+|++|+|++++++      |      .
T Consensus       118 ~~lvmEyi~G~tL~~~~-----~~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~gi~liDfg~~~~~~  185 (232)
T PRK10359        118 YIMLIEYIEGVELNDMP-----EISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNGLRIIDLSGKRCTA  185 (232)
T ss_pred             eEEEEEEECCccHHHhh-----hccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCCEEEEECCCccccc
Confidence            6899999    555541     1222    34669999999999999   9999999999999763      1      0


Q ss_pred             C----hhhhhcCCCCcchhhhhHHHHHHHHH
Q 040682           67 P----PEYALRGFFSIKSDVFSFGVLMLEIL   93 (216)
Q Consensus        67 a----PE~~~~~~~~~~~Dv~s~G~~l~ell   93 (216)
                      .    ........+..++|+|+||+++.-..
T Consensus       186 e~~a~d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        186 QRKAKDRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             chhhHHHHHHHhHhcccccccceeEeehHHH
Confidence            0    11223345667999999999876443

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.91  E-value=1.4e-09  Score=86.75  Aligned_cols=143  Identities=22%  Similarity=0.244  Sum_probs=93.2

Q ss_pred             eeecc----ccccc---ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            5 LVYSK----LLDAA---NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         5 lV~Ey----~l~~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .+.||    ++...   ....+..+....-.+|+-||+.||.|||+. .++|+|+++....|.+..              
T Consensus       149 Fiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~PpiihgnlTc~tifiq~ngLIkig~~ap~s~  227 (458)
T KOG1266|consen  149 FITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDST  227 (458)
T ss_pred             EEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCccccCCcchhheeecCCceEEecccCcccc
Confidence            45778    44444   234445577778889999999999999997 599999999888776654              


Q ss_pred             -------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 -------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                         +|.+||.......+.++|||+||.--.|+.-+..--.  +.+....+            .+
T Consensus       228 h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~t--nseS~~~~------------ee  293 (458)
T KOG1266|consen  228 HPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQST--NSESKVEV------------EE  293 (458)
T ss_pred             chhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccC--CCcceeeh------------hh
Confidence                               3778877766677889999999988888876553210  01110000            00


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .+...+...+..     .-..++..|++.+|+.||+|.+++-+
T Consensus       294 ~ia~~i~~len~-----lqr~~i~kcl~~eP~~rp~ar~llfH  331 (458)
T KOG1266|consen  294 NIANVIIGLENG-----LQRGSITKCLEGEPNGRPDARLLLFH  331 (458)
T ss_pred             hhhhheeeccCc-----cccCcCcccccCCCCCCcchhhhhcC
Confidence            000111111111     12456677999999999999877644

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.88  E-value=2.3e-09  Score=81.12  Aligned_cols=56  Identities=25%  Similarity=0.203  Sum_probs=45.6

Q ss_pred             eeeeecc-c---ccccccCCCCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeec
Q 040682            3 KKLVYSK-L---LDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLD   62 (216)
Q Consensus         3 ~~lV~Ey-~---l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~   62 (216)
                      .|||||| .   +... ......++..++..++.+++.++.++|+ .+   ++|||+||.||+++
T Consensus        92 ~~lVmE~~~g~~~~~~-~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~  152 (190)
T cd05145          92 NVLVMEFIGDDGSPAP-RLKDVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH  152 (190)
T ss_pred             CEEEEEEecCCCchhh-hhhhccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE
Confidence            3799999 2   2211 1233467888999999999999999999 88   99999999999997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.74  E-value=1e-08  Score=84.70  Aligned_cols=50  Identities=28%  Similarity=0.273  Sum_probs=38.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCC-CCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDL-KASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~di-k~~nil~~~   63 (216)
                      .||||||    +|...  .   ...   ...++.++++||+|||+++   |+|||| ||+|||++.
T Consensus        93 ~~LVmE~~~G~~L~~~--~---~~~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~  147 (365)
T PRK09188         93 DGLVRGWTEGVPLHLA--R---PHG---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGP  147 (365)
T ss_pred             cEEEEEccCCCCHHHh--C---ccc---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcC
Confidence            5899999    44321  1   111   2468899999999999998   999999 999999964

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.67  E-value=9e-08  Score=72.93  Aligned_cols=91  Identities=19%  Similarity=0.116  Sum_probs=60.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCC-CCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDL-KASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~di-k~~nil~~~~-------------   64 (216)
                      .++||||    +|....       .. ....++.|++.+|.++|++|   |+|||| ||.|||++.+             
T Consensus        73 ~~lvmeyI~G~~L~~~~-------~~-~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~  141 (218)
T PRK12274         73 RHLDRSYLAGAAMYQRP-------PR-GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVR  141 (218)
T ss_pred             EEEEEeeecCccHHhhh-------hh-hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCcee
Confidence            4789999    333221       11 12457889999999999999   999999 7999999752             


Q ss_pred             -----------------------------CCChhhhhcC-CCC-cchhhhhHHHHHHHHHhCCCCCCcCCC
Q 040682           65 -----------------------------YMPPEYALRG-FFS-IKSDVFSFGVLMLEILSGKKSTAVYNT  104 (216)
Q Consensus        65 -----------------------------y~aPE~~~~~-~~~-~~~Dv~s~G~~l~ell~g~~~~~~~~~  104 (216)
                                                   |+.|+--.-. ..+ ...+-++-|.-+|.++|+..++-...+
T Consensus       142 ~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~  212 (218)
T PRK12274        142 GNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE  212 (218)
T ss_pred             cCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence                                         2223211111 122 334556889999999998887654443

>smart00090 RIO RIO-like kinase

Probab=98.55  E-value=1.1e-07  Score=74.37  Aligned_cols=57  Identities=23%  Similarity=0.205  Sum_probs=44.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD   62 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~   62 (216)
                      .++||||    ++.... .....+...+...++.|++.+|++||+++  .++|+|+||+||+++
T Consensus       123 ~~lV~E~~~g~~L~~~~-~~~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NIli~  183 (237)
T smart00090      123 NVLVMEFIGGDGLPAPR-LKDVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNILVH  183 (237)
T ss_pred             ceEEEEEecCCcccccc-cccCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhEEEE
Confidence            4799999    343332 12334566677899999999999999875  599999999999997

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.52  E-value=2.5e-08  Score=87.62  Aligned_cols=148  Identities=21%  Similarity=0.205  Sum_probs=104.2

Q ss_pred             eeeeecc-ccccc--cc-CCCC-CCChHHHHHHHHHHHHHHHhhh-cCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK-LLDAA--NI-DKKR-LLDWQVRARIIEGIAQGLLYLH-QYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey-~l~~~--~~-~~~~-~l~~~~~~~i~~~i~~~L~~LH-~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      .++++|| ...+.  .. .... ..+...+..++.|+..|+.|+| ..+   +.|+|+||+|.+++.             
T Consensus        96 ~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~A  172 (601)
T KOG0590|consen   96 YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLA  172 (601)
T ss_pred             cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhh
Confidence            4677777 22222  11 2222 6777888899999999999999 777   999999999998864             


Q ss_pred             ---------------------CCCChhhhhcCC-CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           64 ---------------------GYMPPEYALRGF-FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        64 ---------------------~y~aPE~~~~~~-~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                           .|.+||...+.. .....|+||.|+++.-+++|..|+.........+..|...-     
T Consensus       173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~-----  247 (601)
T KOG0590|consen  173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK-----  247 (601)
T ss_pred             ccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc-----
Confidence                                 199999988854 45778999999999999999999876655543333222110     


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVV  165 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl  165 (216)
                        ...    ....+.. ......+++..++..+|+.|.+.+++.
T Consensus       248 --~~~----~~~~~~~-~~~~~~~~l~k~l~~~~~~r~s~~~~~  284 (601)
T KOG0590|consen  248 --GRF----TQLPWNS-ISDQAHDLLHKILKENPSNRLSIEELK  284 (601)
T ss_pred             --ccc----ccCcccc-CChhhhhcccccccCCchhcccccccc
Confidence              000    0011111 445667888888889999999987764

>PRK10345 hypothetical protein; Provisional

Probab=98.48  E-value=1.3e-07  Score=72.52  Aligned_cols=53  Identities=19%  Similarity=0.209  Sum_probs=40.7

Q ss_pred             eeeecc------cccccccCCCCCCChHHHHHHHHHHHHHH-HhhhcCCCCCeecCCCCCCceeecC
Q 040682            4 KLVYSK------LLDAANIDKKRLLDWQVRARIIEGIAQGL-LYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         4 ~lV~Ey------~l~~~~~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .+|+||      +|.++...  ..+++.  ..++.+++.++ +|||+++   |+||||||+|||++.
T Consensus        81 ~~I~e~~G~~~~tL~~~l~~--~~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~  140 (210)
T PRK10345         81 DVIADFDGKPSITLTEFAEQ--CRYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQR  140 (210)
T ss_pred             EEEecCCCCcchhHHHHHHc--ccccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEec
Confidence            378898      56666432  235555  45688888888 9999998   999999999999975

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.46  E-value=2.4e-06  Score=70.91  Aligned_cols=150  Identities=19%  Similarity=0.222  Sum_probs=100.0

Q ss_pred             CCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC----------------------------CCChhhhh
Q 040682           21 LLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------YMPPEYAL   72 (216)
Q Consensus        21 ~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~----------------------------y~aPE~~~   72 (216)
                      ...|.-.+.+++.++.+.+-||..|   ..-+|+.++|+|+.+.                            |.+||...
T Consensus       113 ~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~  189 (637)
T COG4248         113 HCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQT  189 (637)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhc
Confidence            4789999999999999999999998   8889999999999762                            99999765


Q ss_pred             -----cCCCCcchhhhhHHHHHHHHHhC-CCCCCcCCCCcc--chhh-hhhhh--hccCccccccccccccchhhHH-HH
Q 040682           73 -----RGFFSIKSDVFSFGVLMLEILSG-KKSTAVYNTGSF--NLLG-HAWDL--WKDDRVHELIDPVITQDEISLS-ML  140 (216)
Q Consensus        73 -----~~~~~~~~Dv~s~G~~l~ell~g-~~~~~~~~~~~~--~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~  140 (216)
                           +...+...|-|.+|+++++++.| ++||.+-.....  +..+ .+-..  ....+-.....+..  ..++.. ..
T Consensus       190 ~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P--~~~P~~~Lp  267 (637)
T COG4248         190 LPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPP--RSIPLSMLP  267 (637)
T ss_pred             cccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCC--CCCChhhcC
Confidence                 33567788999999999999886 888865433222  1111 11100  00111111111111  122221 23


Q ss_pred             HHHHHHHHhccccC--CCCCCCHHHHHHHHccccccc
Q 040682          141 MRYVKVALLCVQET--VADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       141 ~~~~~l~~~cl~~~--p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ..+..+-.+|+...  +.-|||++--+..|..++..+
T Consensus       268 p~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L  304 (637)
T COG4248         268 PDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQL  304 (637)
T ss_pred             HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhh
Confidence            45667778888643  568999988888877765555

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.33  E-value=5e-07  Score=69.09  Aligned_cols=52  Identities=25%  Similarity=0.232  Sum_probs=42.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD   62 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~   62 (216)
                      .++||||    +|.++....    .. ++..++.+++.+|+++|+.+   ++|+|++|.||+++
T Consensus        74 ~~lv~e~~~G~~L~~~~~~~----~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~  129 (211)
T PRK14879         74 FIIVMEYIEGEPLKDLINSN----GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS  129 (211)
T ss_pred             CEEEEEEeCCcCHHHHHHhc----cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE
Confidence            4789999    555553221    12 78899999999999999998   99999999999997

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.25  E-value=8.4e-07  Score=80.30  Aligned_cols=142  Identities=20%  Similarity=0.170  Sum_probs=98.7

Q ss_pred             eeeecc-ccccc--ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----------------
Q 040682            4 KLVYSK-LLDAA--NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------   63 (216)
Q Consensus         4 ~lV~Ey-~l~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----------------   63 (216)
                      +||++| .-.++  .....+..+..-.......+..++++||+..   +.|+|++|.|++...                 
T Consensus       880 ~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~  956 (1205)
T KOG0606|consen  880 PLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL  956 (1205)
T ss_pred             chhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccccc
Confidence            567777 11222  1222234666677778888999999999986   899999999998643                 


Q ss_pred             -------------------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCC
Q 040682           64 -------------------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTA  100 (216)
Q Consensus        64 -------------------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~  100 (216)
                                                                 +|.+||...+......+|.|++|++++|.++|.+||.
T Consensus       957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen  957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred             ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence                                                       2999999999999999999999999999999999975


Q ss_pred             cCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHH
Q 040682          101 VYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMS  162 (216)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  162 (216)
                      .......      .        ..++...++....+.+......+++.+-+..+|.+|..+.
T Consensus      1037 a~tpq~~------f--------~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AETPQQI------F--------ENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             Ccchhhh------h--------hccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence            3332221      1        1111111222222223455677778888888888887765

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.23  E-value=1.3e-06  Score=68.52  Aligned_cols=52  Identities=29%  Similarity=0.319  Sum_probs=39.0

Q ss_pred             eeeecc-----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            4 KLVYSK-----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         4 ~lV~Ey-----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      ++||||     +|.++..  ...++..    .+.+++.+|.+||+.|   |+|+|+||.|||++.+
T Consensus       122 ~lV~e~l~G~~~L~~~l~--~~~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~  178 (239)
T PRK01723        122 DILIERIEGARDLVALLQ--EAPLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPD  178 (239)
T ss_pred             eEEEEecCCCCCHHHHHh--cCCCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCC
Confidence            589998     3443322  2334443    3678999999999999   9999999999999763

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.21  E-value=9.2e-07  Score=77.28  Aligned_cols=49  Identities=22%  Similarity=0.323  Sum_probs=40.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .++||||    +|.++..         ....++.+++.+|.+||+.+   ++|||+||+|||++.
T Consensus       411 ~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl~~  463 (535)
T PRK09605        411 KTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIVRD  463 (535)
T ss_pred             CEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEEEC
Confidence            4788999    5555421         45779999999999999998   999999999999944

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.20  E-value=1.5e-06  Score=65.11  Aligned_cols=35  Identities=26%  Similarity=0.366  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeec
Q 040682           25 QVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLD   62 (216)
Q Consensus        25 ~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~   62 (216)
                      .+...++.+++.++.++|. .+   ++|+|+||+||+++
T Consensus       114 ~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~  149 (187)
T cd05119         114 EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD  149 (187)
T ss_pred             ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE
Confidence            6778899999999999999 87   99999999999998

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.19  E-value=1.8e-06  Score=65.52  Aligned_cols=52  Identities=23%  Similarity=0.325  Sum_probs=41.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      .++||||    +|..+..       ......++.+++.++.++|+.+   ++|+|+||.||+++.+
T Consensus       106 ~~lv~e~~~g~~L~~~~~-------~~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nill~~~  161 (198)
T cd05144         106 HAVVMEYIDGVELYRVRV-------LEDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNILVDDD  161 (198)
T ss_pred             ceEEEEEeCCcchhhccc-------cccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEEEcCC
Confidence            4789999    4443311       1345678899999999999988   9999999999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.19  E-value=1.3e-06  Score=66.25  Aligned_cols=48  Identities=25%  Similarity=0.354  Sum_probs=38.1

Q ss_pred             eeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec
Q 040682            4 KLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD   62 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~   62 (216)
                      ++||||    +|.++.....        ..++.+++.+|++||+.+   ++|+|++|.||+++
T Consensus        73 ~lv~e~~~g~~l~~~~~~~~--------~~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~  124 (199)
T TIGR03724        73 TIVMEYIEGKPLKDVIEEGN--------DELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR  124 (199)
T ss_pred             EEEEEEECCccHHHHHhhcH--------HHHHHHHHHHHHHHHHCC---eecCCCCcceEEEE
Confidence            788999    4444421111        078999999999999998   99999999999997

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.10  E-value=7.5e-07  Score=77.44  Aligned_cols=125  Identities=23%  Similarity=0.325  Sum_probs=81.8

Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------------------------------CCCC
Q 040682           26 VRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------------------------------GYMP   67 (216)
Q Consensus        26 ~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------------------------------~y~a   67 (216)
                      ....=+.+++.|+.|+|..  ..+||+.|.|++|.++.                                      +|.+
T Consensus       100 ~~f~nl~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~a  177 (700)
T KOG2137|consen  100 DGFANLGNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLA  177 (700)
T ss_pred             HhhhhhhcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCccccc
Confidence            3334456677999999974  46999999999999976                                      2999


Q ss_pred             hhhhhcCCCCcchhhhhHHHHHHHHHhCCC-CCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHH
Q 040682           68 PEYALRGFFSIKSDVFSFGVLMLEILSGKK-STAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKV  146 (216)
Q Consensus        68 PE~~~~~~~~~~~Dv~s~G~~l~ell~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  146 (216)
                      ||++.+...+.++|++|+|+++|.+..|.. .+........ +. ......+..           ........+.++.+=
T Consensus       178 pE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~-~~-~~~~~~~~~-----------~~~~s~~~p~el~~~  244 (700)
T KOG2137|consen  178 PEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS-YS-FSRNLLNAG-----------AFGYSNNLPSELRES  244 (700)
T ss_pred             chhhccccccccccceeeeeEEEEEecCCcchhhccCCcch-hh-hhhcccccc-----------cccccccCcHHHHHH
Confidence            999999888999999999999999985444 3332211110 00 000000000           000112245567777


Q ss_pred             HHhccccCCCCCCCHHHHH
Q 040682          147 ALLCVQETVADRPTMSDVV  165 (216)
Q Consensus       147 ~~~cl~~~p~~Rps~~evl  165 (216)
                      +.+.+..++.-||++.++.
T Consensus       245 l~k~l~~~~~~rp~~~~l~  263 (700)
T KOG2137|consen  245 LKKLLNGDSAVRPTLDLLL  263 (700)
T ss_pred             HHHHhcCCcccCcchhhhh
Confidence            7788888888898665543

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.04  E-value=6.4e-06  Score=70.43  Aligned_cols=126  Identities=24%  Similarity=0.264  Sum_probs=88.3

Q ss_pred             CCCChHHHHHHHHHHHH----HHHhhhcCCCCCeecCCCCCCceeecCC-------------------------------
Q 040682           20 RLLDWQVRARIIEGIAQ----GLLYLHQYSRLRIIHRDLKASNILLDSG-------------------------------   64 (216)
Q Consensus        20 ~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~iiH~dik~~nil~~~~-------------------------------   64 (216)
                      ..++....+....+...    |+..+|+.+   ++|-|+||.||.+..+                               
T Consensus       213 ~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~  289 (524)
T KOG0601|consen  213 NFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPE  289 (524)
T ss_pred             ccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCC
Confidence            34778888889999998    999999998   9999999999987652                               


Q ss_pred             ----CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHH
Q 040682           65 ----YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSML  140 (216)
Q Consensus        65 ----y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (216)
                          |++||...+ -++...|+|++|.++.+..++...+.......       |.....        ..++.+.... -.
T Consensus       290 ~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-------W~~~r~--------~~ip~e~~~~-~s  352 (524)
T KOG0601|consen  290 GDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSS-------WSQLRQ--------GYIPLEFCEG-GS  352 (524)
T ss_pred             CCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCC-------cccccc--------ccCchhhhcC-cc
Confidence                899997654 46889999999999999998887654321111       111111        1112222211 23


Q ss_pred             HHHHHHHHhccccCCCCCCCHHHHH
Q 040682          141 MRYVKVALLCVQETVADRPTMSDVV  165 (216)
Q Consensus       141 ~~~~~l~~~cl~~~p~~Rps~~evl  165 (216)
                      .++...+..+++.+|-.|+++..+.
T Consensus       353 ~~l~~~~~~~~d~~~~~~~~~q~~~  377 (524)
T KOG0601|consen  353 SSLRSVTSQMLDEDPRLRLTAQILT  377 (524)
T ss_pred             hhhhhHHHHhcCcchhhhhHHHHHh
Confidence            3344478889999998888885543

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.01  E-value=1.3e-05  Score=57.21  Aligned_cols=56  Identities=29%  Similarity=0.313  Sum_probs=42.6

Q ss_pred             eeeeecc-cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK-LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey-~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+|||| ....+..     ++......++.+++.+|+++|......++|+|++|.||+++.
T Consensus        68 ~~~v~e~~~g~~~~~-----~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~  124 (155)
T cd05120          68 SYLLMEWIEGETLDE-----VSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD  124 (155)
T ss_pred             cEEEEEecCCeeccc-----CCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC
Confidence            5788888 2222211     166777889999999999999854345999999999999986

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.99  E-value=9.4e-06  Score=61.50  Aligned_cols=58  Identities=21%  Similarity=0.129  Sum_probs=41.7

Q ss_pred             eeeeecc-ccccc--ccCCCCCCChHHHHHHHHHHHHHHHhh-hcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK-LLDAA--NIDKKRLLDWQVRARIIEGIAQGLLYL-HQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey-~l~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~iiH~dik~~nil~~~   63 (216)
                      .+||||| .-..+  .......++..+...+..+++.+|..| |..+   ++|+|+++.||++..
T Consensus        99 ~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs~~NIL~~~  160 (197)
T cd05146          99 HVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADLSEYNMLWHD  160 (197)
T ss_pred             CEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEC
Confidence            4789999 21111  011122345566778889999999999 7787   999999999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.94  E-value=1.1e-05  Score=64.12  Aligned_cols=58  Identities=21%  Similarity=0.220  Sum_probs=47.0

Q ss_pred             eeeeecc-----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK-----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey-----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .++|+|+     +|+++... .....+...+..++.+++..++-||..|   ++|+|++++|||++.
T Consensus       110 s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~  173 (268)
T PRK15123        110 SFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHL  173 (268)
T ss_pred             eEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEec
Confidence            5799998     56666321 1344566778899999999999999999   999999999999975

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.91  E-value=1.4e-05  Score=61.14  Aligned_cols=58  Identities=29%  Similarity=0.345  Sum_probs=47.2

Q ss_pred             eeeeecc-----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            3 KKLVYSK-----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         3 ~~lV~Ey-----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      .++|+|+     +|.++...... .+......++.+++..++-||..|   |+|+|+++.|||++.+
T Consensus        92 s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~  154 (206)
T PF06293_consen   92 SYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAKLHDAG---IYHGDLNPSNILVDPD  154 (206)
T ss_pred             EEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCC
Confidence            3788998     56665333222 677788899999999999999999   9999999999999875

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.58  E-value=7.4e-05  Score=55.65  Aligned_cols=58  Identities=26%  Similarity=0.232  Sum_probs=44.0

Q ss_pred             eeeecc-----cccccccCCCCCCChHHH-HHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            4 KLVYSK-----LLDAANIDKKRLLDWQVR-ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         4 ~lV~Ey-----~l~~~~~~~~~~l~~~~~-~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      .|+|||     ++.++.......-..++. ..+++.+-+.+.-||.++   +||+|+..+||++.++
T Consensus        86 ~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~  149 (229)
T KOG3087|consen   86 QIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSD  149 (229)
T ss_pred             eEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecC
Confidence            478898     566664433333344444 678999999999999998   9999999999998764

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.54  E-value=7.4e-05  Score=64.05  Aligned_cols=128  Identities=18%  Similarity=0.196  Sum_probs=87.3

Q ss_pred             CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------------------CC--Chhh
Q 040682           20 RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------------------YM--PPEY   70 (216)
Q Consensus        20 ~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------------------y~--aPE~   70 (216)
                      ..++...++.+..|++.++.++|+..   .+|.|+||+||++..+                           +.  ++..
T Consensus       361 ~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~  437 (524)
T KOG0601|consen  361 QMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEIL  437 (524)
T ss_pred             HhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccccccceecccccccccccccchhh
Confidence            34677888999999999999999988   9999999999999761                           23  4444


Q ss_pred             hhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhc
Q 040682           71 ALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLC  150 (216)
Q Consensus        71 ~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  150 (216)
                      .....+..+.|+++||..+.+..++...-...                 .....+.....+... .  ...++..+....
T Consensus       438 ~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-----------------~~~~~i~~~~~p~~~-~--~~~~~q~~~kv~  497 (524)
T KOG0601|consen  438 LEDYPHLSKADIFSLGLSVDEAITGSPLSESG-----------------VQSLTIRSGDTPNLP-G--LKLQLQVLLKVM  497 (524)
T ss_pred             ccccccccccccccccccccccccCcccCccc-----------------ccceeeecccccCCC-c--hHHhhhhhhhhh
Confidence            44557788999999999998888877642100                 001111111111111 1  224566677778


Q ss_pred             cccCCCCCCCHHHHHHHHcc
Q 040682          151 VQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       151 l~~~p~~Rps~~evl~~L~~  170 (216)
                      ..+++..||.+.++..+...
T Consensus       498 ~~~~~~~~~l~~~l~~~~~~  517 (524)
T KOG0601|consen  498 INPDRKRRPSAVELSLHSEF  517 (524)
T ss_pred             cCCccccchhhhhhcccchh
Confidence            88999999998777655443

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.53  E-value=0.0001  Score=54.15  Aligned_cols=55  Identities=27%  Similarity=0.161  Sum_probs=37.5

Q ss_pred             eeeeecc-cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCC--CCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK-LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYS--RLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey-~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~iiH~dik~~nil~~~   63 (216)
                      .++|||| .-..+...      ......++.+++++|+.||+.+  ...++|+|++|.||+++.
T Consensus        66 ~~lv~e~i~G~~l~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~  123 (170)
T cd05151          66 GVLITEFIEGSELLTE------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDD  123 (170)
T ss_pred             CeEEEEecCCCccccc------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEEC
Confidence            4788898 22222110      0112346788999999999976  223599999999999984

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.48  E-value=0.00028  Score=61.71  Aligned_cols=85  Identities=18%  Similarity=0.263  Sum_probs=59.9

Q ss_pred             eeeeecc--cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC----------------
Q 040682            3 KKLVYSK--LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------   64 (216)
Q Consensus         3 ~~lV~Ey--~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~----------------   64 (216)
                      .|||.|-  -|..+...    ++...+--.+.||+.||.|||..+  .++|++|.-..|.++..                
T Consensus        84 ~ylvTErV~Pl~~~lk~----l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~  157 (690)
T KOG1243|consen   84 LYLVTERVRPLETVLKE----LGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASG  157 (690)
T ss_pred             eEEEeeccccHHHHHHH----hHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEecccc
Confidence            5778887  55544211    225556667899999999998654  59999999999999862                


Q ss_pred             -------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhC
Q 040682           65 -------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSG   95 (216)
Q Consensus        65 -------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g   95 (216)
                                   |..|+......  -..|.|.|||+++|++.|
T Consensus       158 ~~~~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  158 FNAPAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             CCcccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence                         23333221111  246999999999999998

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.38  E-value=0.0002  Score=53.35  Aligned_cols=50  Identities=32%  Similarity=0.472  Sum_probs=39.9

Q ss_pred             eeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            4 KLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      .|||||    .|.+.....        ...+++.+-.-+.-||..+   |+|+|++++|+++..+
T Consensus        75 ~I~me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~  128 (204)
T COG3642          75 LIVMEYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGG  128 (204)
T ss_pred             EEEEEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCC
Confidence            588999    666553333        2567788888889999999   9999999999999875

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.26  E-value=0.00029  Score=60.09  Aligned_cols=56  Identities=21%  Similarity=0.181  Sum_probs=38.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHH-HHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQ-GLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~-~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      ++|||||    +|.++........   ....++..++. .+..+|..|   ++|+|++|.||+++.+
T Consensus       233 ~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~~g---~~H~D~hPgNilv~~~  293 (437)
T TIGR01982       233 RVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLRDG---FFHADLHPGNIFVLKD  293 (437)
T ss_pred             ceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHhCC---ceeCCCCcccEEECCC
Confidence            5799999    5555522111122   23456666665 467889888   9999999999999764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PF11883 DUF3403: Domain of unknown function (DUF3403); InterPro: IPR021820 This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins

Probab=97.26  E-value=0.00033  Score=40.20  Aligned_cols=44  Identities=27%  Similarity=0.508  Sum_probs=33.5

Q ss_pred             cccccCccccccccccCCCCCCCCCCCCC--cccccccceeccccCC
Q 040682          172 HLNLCSLKKLAFVRSKNVKNSSHSNSGTS--EFCSVNDITVSLINSR  216 (216)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~~~  216 (216)
                      ...+|.|++|.++.... .....+++...  +.+|+|++|++.+++|
T Consensus         3 ~~~LP~PKqPgF~~~r~-~~e~~sSss~~~~~~~SvNevTiT~l~~R   48 (48)
T PF11883_consen    3 TATLPQPKQPGFFTGRS-PSETDSSSSKQRDESCSVNEVTITMLEAR   48 (48)
T ss_pred             cccCCCCCCCCEEeEcC-CCCcCCCcccccCCCCCeeeEEEEeEecC
Confidence            35689999999998844 44344444444  8999999999999998

; GO: 0004674 protein serine/threonine kinase activity

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.06  E-value=0.00063  Score=51.29  Aligned_cols=59  Identities=27%  Similarity=0.279  Sum_probs=36.8

Q ss_pred             eeeeecc-c--ccccccCCCCCCChHHHHHHHHHHHHHHHh-hhcCCCCCeecCCCCCCceeecCC
Q 040682            3 KKLVYSK-L--LDAANIDKKRLLDWQVRARIIEGIAQGLLY-LHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         3 ~~lV~Ey-~--l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~-LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      ..||||| .  ...+..-....++......++.+++..+.. +|..|   ++|+|+.+.||+++.+
T Consensus        81 ~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~  143 (188)
T PF01163_consen   81 NVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG  143 (188)
T ss_dssp             TEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT
T ss_pred             CEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc
Confidence            3689999 4  111111111112245566777888886655 56887   9999999999999875

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=96.90  E-value=0.009  Score=51.37  Aligned_cols=74  Identities=16%  Similarity=0.200  Sum_probs=57.0

Q ss_pred             CCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCCC-------CChhhhhcCC-----CCcchhhhhHHHH
Q 040682           21 LLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY-------MPPEYALRGF-----FSIKSDVFSFGVL   88 (216)
Q Consensus        21 ~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~y-------~aPE~~~~~~-----~~~~~Dv~s~G~~   88 (216)
                      ..++...+.++.|+..||.++|+.|   +..+-+.+.+||++..-       .--+++..++     -..+.|.-.||.+
T Consensus       389 ~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~~~le~~Qq~D~~~lG~l  465 (655)
T KOG3741|consen  389 KAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPTEPLESQQQNDLRDLGLL  465 (655)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCCCCcchhHHhhhhHHHHHHH
Confidence            4678999999999999999999999   99999999999998741       0111222111     1256788899999


Q ss_pred             HHHHHhCCC
Q 040682           89 MLEILSGKK   97 (216)
Q Consensus        89 l~ell~g~~   97 (216)
                      ++-|.+|..
T Consensus       466 l~aLAt~~~  474 (655)
T KOG3741|consen  466 LLALATGTE  474 (655)
T ss_pred             HHHHhhccc
Confidence            999999854

>PRK09902 hypothetical protein; Provisional

Probab=96.88  E-value=0.0018  Score=49.60  Aligned_cols=58  Identities=14%  Similarity=0.114  Sum_probs=47.2

Q ss_pred             eeeeecc-----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK-----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey-----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      -+||+|-     +|+++... .....+..++..++.+++..++-||..|   +.|+|+-+.||+++.
T Consensus       100 A~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~  163 (216)
T PRK09902        100 ALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKT  163 (216)
T ss_pred             EEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecC
Confidence            4678885     67766322 2335678888899999999999999999   999999999999973

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=96.43  E-value=0.005  Score=47.44  Aligned_cols=50  Identities=22%  Similarity=0.288  Sum_probs=36.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      .+|||||    .|.+..     .++.    .+...+.+++.-||..|   +.|+|..|+|++++.+
T Consensus       118 ~~ll~EYIeG~~l~d~~-----~i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~  171 (229)
T PF06176_consen  118 YVLLMEYIEGVELNDIE-----DIDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNN  171 (229)
T ss_pred             EEEEEEEecCeecccch-----hcCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECC
Confidence            4689999    333331     1222    24466778899999999   9999999999999874

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.17  E-value=0.0037  Score=54.59  Aligned_cols=52  Identities=13%  Similarity=0.187  Sum_probs=33.0

Q ss_pred             eeeeecc----ccccccc-CCCC----CCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            3 KKLVYSK----LLDAANI-DKKR----LLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~----~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      ++|||||    .+.++.. ...+    .+....+..++.|+.       ..|   ++|+|++|.||+++.+
T Consensus       236 ~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~~G---ffHaDpHPGNIlv~~~  296 (537)
T PRK04750        236 TVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-------RDG---FFHADMHPGNIFVSYD  296 (537)
T ss_pred             ceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------hCC---eeeCCCChHHeEEecC
Confidence            5799999    5544311 1111    244444555555554       356   9999999999999753

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.12  E-value=0.018  Score=43.90  Aligned_cols=39  Identities=21%  Similarity=0.233  Sum_probs=28.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ   43 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~   43 (216)
                      .++||||    .+.....  ...++..+...++.+++.+|..||+
T Consensus        75 ~~~v~e~i~G~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~  117 (223)
T cd05154          75 PFYVMERVDGRVLRDRLL--RPELSPEERRALARALADTLAALHS  117 (223)
T ss_pred             ceEEEEEeCCEecCCCCC--CCCCCHHHHHHHHHHHHHHHHHHhC
Confidence            4799999    3333311  1457888888999999999999995

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=94.76  E-value=0.084  Score=39.79  Aligned_cols=62  Identities=15%  Similarity=0.023  Sum_probs=46.7

Q ss_pred             eeeeecc-c-cccc----ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            3 KKLVYSK-L-LDAA----NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         3 ~~lV~Ey-~-l~~~----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      +++|.|| . ...+    ...+-..-+|.++.+++.++++.+.++++.....+.-+|++++|+.++.+
T Consensus        31 ~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~   98 (188)
T PF12260_consen   31 RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDD   98 (188)
T ss_pred             CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCC
Confidence            4678888 2 1111    01122346999999999999999999998665569999999999998875

Proteins in this uncharacterised family are described as transmembrane proteins.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=94.45  E-value=0.071  Score=41.88  Aligned_cols=59  Identities=24%  Similarity=0.276  Sum_probs=39.5

Q ss_pred             eeeeecccccc-ccc--CCCCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeecCC
Q 040682            3 KKLVYSKLLDA-ANI--DKKRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         3 ~~lV~Ey~l~~-~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~~~   64 (216)
                      ..|||||--+. .-.  ...-++...+...+..++++++.-|-. .+   ++|+|++.-|||+.++
T Consensus       141 nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~---LVHgDLSEyNiL~~~~  203 (268)
T COG1718         141 NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAG---LVHGDLSEYNILVHDG  203 (268)
T ss_pred             CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcC---cccccchhhheEEECC
Confidence            46899992222 100  111123333677778888888888877 55   9999999999998754

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=94.39  E-value=0.17  Score=47.85  Aligned_cols=125  Identities=18%  Similarity=0.207  Sum_probs=80.0

Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCC---ceeecC------------------------------
Q 040682           17 DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKAS---NILLDS------------------------------   63 (216)
Q Consensus        17 ~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~---nil~~~------------------------------   63 (216)
                      ..-..++..+.+.+..+..+||+|+|+..   ..|.-+..+   +.-.+.                              
T Consensus       278 q~v~~i~~~~~r~~~~~~~~GL~~~h~~~---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~  354 (1351)
T KOG1035|consen  278 QSVGSIPLETLRILHQKLLEGLAYLHSLS---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAE  354 (1351)
T ss_pred             hhccccCHHHHHHHHHHHhhhHHHHHHhc---cceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCcc
Confidence            34456788999999999999999999865   433332222   111110                              


Q ss_pred             CCCChhhhhcCCCCc--chhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHH
Q 040682           64 GYMPPEYALRGFFSI--KSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLM  141 (216)
Q Consensus        64 ~y~aPE~~~~~~~~~--~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (216)
                      .+.++|......+..  ..|+|.+|.....+..|..+-.....                 ....++.    .     ...
T Consensus       355 ~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~-----------------~~~~l~~----~-----~~~  408 (1351)
T KOG1035|consen  355 IRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAV-----------------PVSLLDV----L-----STS  408 (1351)
T ss_pred             ccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccccc-----------------hhhhhcc----c-----cch
Confidence            155666555554443  46999999999999888775321100                 0000000    0     111


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          142 RYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       142 ~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      .+.+....|+..++++|+++.+++.+.-.
T Consensus       409 ~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~  437 (1351)
T KOG1035|consen  409 ELLDALPKCLDEDSEERLSALELLTHPFL  437 (1351)
T ss_pred             hhhhhhhhhcchhhhhccchhhhhhchhc
Confidence            56788889999999999999999876553

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=93.58  E-value=0.093  Score=41.82  Aligned_cols=52  Identities=25%  Similarity=0.275  Sum_probs=33.1

Q ss_pred             eeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            4 KLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      .+||||    -|....      ++......++..|++-+.-.-..|   +||+|+++-||+++.+
T Consensus       183 aVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~d  238 (304)
T COG0478         183 AVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTED  238 (304)
T ss_pred             eeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecC
Confidence            578999    333331      133344445555555544444556   9999999999999884

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=90.32  E-value=0.45  Score=41.68  Aligned_cols=57  Identities=14%  Similarity=0.108  Sum_probs=36.5

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      -|.|+|||    .+.++....+..++...+...+.++..-+-+.|  |   .+|+|--|.||++.+
T Consensus       276 ~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~--G---ffHaDPHPGNilv~~  336 (538)
T KOG1235|consen  276 KRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKT--G---FFHADPHPGNILVRP  336 (538)
T ss_pred             ceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhc--C---CccCCCCCCcEEEec
Confidence            37899999    555553334445666654444444433333333  4   999999999999984

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=83.82  E-value=0.37  Score=42.98  Aligned_cols=70  Identities=23%  Similarity=0.177  Sum_probs=52.1

Q ss_pred             ChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------------------CCCChhhhhcCC
Q 040682           23 DWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------------------GYMPPEYALRGF   75 (216)
Q Consensus        23 ~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------------------~y~aPE~~~~~~   75 (216)
                      ...+...+.+.-..+++++|+..   -+|+|    ||+...                           .+++||+...+.
T Consensus       334 ~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~  406 (829)
T KOG0576|consen  334 EQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSEEEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENT  406 (829)
T ss_pred             hhhhhhhhhhhhccccccccccc---ccCcc----cccccccccccccccCCcccCcccccccCCCCCCCCCchhhcccc
Confidence            33444556677778899999864   57887    444332                           489999999999


Q ss_pred             CCcchhhhhHHHHHHHHHhCCCCC
Q 040682           76 FSIKSDVFSFGVLMLEILSGKKST   99 (216)
Q Consensus        76 ~~~~~Dv~s~G~~l~ell~g~~~~   99 (216)
                      +..+.|+|+.|.--.++.-|.+|-
T Consensus       407 ~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  407 IDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             cccCCCccCCCcchhhcCCCCCCC
Confidence            999999999998767777666653

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=83.49  E-value=0.41  Score=41.81  Aligned_cols=79  Identities=23%  Similarity=0.256  Sum_probs=41.3

Q ss_pred             cchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCC
Q 040682           78 IKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVAD  157 (216)
Q Consensus        78 ~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  157 (216)
                      .++|||++|.++.++..|...+......+.  .......+....-...   .......-.++...++++...|+-..|..
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~--l~~i~k~~~~d~~~~~---~a~e~~~~~~~d~~~~~~~~~c~~~~~~i  184 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEY--LEILLKYYTDDQELLS---TAMEHLIQLLADKKRLPLLKKCLWLEPII  184 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHH--HHHHHHhccCchhHHH---HHHHHHHHHhhhHhHHHHhccCCcccccc
Confidence            699999999999999887765432221111  1111110000000000   00000222335667788888888888877


Q ss_pred             CCCH
Q 040682          158 RPTM  161 (216)
Q Consensus       158 Rps~  161 (216)
                      ||..
T Consensus       185 r~l~  188 (725)
T KOG1093|consen  185 RPLP  188 (725)
T ss_pred             ccch
Confidence            7643

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=82.46  E-value=2.3  Score=32.34  Aligned_cols=46  Identities=24%  Similarity=0.253  Sum_probs=28.0

Q ss_pred             cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682           10 LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus        10 ~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      +|+++.  ....++. .....+.+.   ..||-..+   |+.+|++|.||++...
T Consensus       109 TL~~~l--~~~~~~~-~~~~~L~~f---~~~l~~~~---Iv~~dl~~~NIv~~~~  154 (199)
T PF10707_consen  109 TLEDYL--KEGGLTE-ELRQALDEF---KRYLLDHH---IVIRDLNPHNIVVQRR  154 (199)
T ss_pred             cHHHHH--HcCCccH-HHHHHHHHH---HHHHHHcC---CeecCCCcccEEEEec
Confidence            455553  2233444 333344433   34555555   9999999999998764

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=80.20  E-value=3.1  Score=36.55  Aligned_cols=56  Identities=21%  Similarity=0.177  Sum_probs=32.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHH-HHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQG-LLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~-L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      +.|+|||    .+++....+...++.+.+   +..++.+ +.-+-..|   .+|.|.-|.||++...
T Consensus       241 ~VLtmE~i~Gi~i~d~~~l~~~g~d~k~i---a~~~~~~f~~q~~~dg---ffHaDpHpGNi~v~~~  301 (517)
T COG0661         241 RVLTMEWIDGIKISDIAALKSAGIDRKEL---AELLVRAFLRQLLRDG---FFHADPHPGNILVRSD  301 (517)
T ss_pred             cEEEEEeeCCEecccHHHHHhcCCCHHHH---HHHHHHHHHHHHHhcC---ccccCCCccceEEecC
Confidence            6799999    566653333344443322   2222222 11112235   9999999999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	216
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		3e-21
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		4e-21
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-15
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-15
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		4e-12
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		4e-12
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		5e-12
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		4e-11
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		8e-08
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-07
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		4e-07
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		4e-07
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		8e-07
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		9e-07
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		2e-06
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-06
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		3e-06
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		3e-06
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		4e-06
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		4e-06
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		5e-06
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		5e-06
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		6e-06
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		6e-06
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		6e-06
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		6e-06
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		7e-06
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		7e-06
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		7e-06
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		8e-06
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		8e-06
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		8e-06
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		8e-06
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		9e-06
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		9e-06
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		9e-06
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		9e-06
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		9e-06
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-05
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-05
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		1e-05
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-05
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-05
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		1e-05
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-05
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-05
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		1e-05
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-05
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		1e-05
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		1e-05
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-05
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-05
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		2e-05
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		3e-05
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		3e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		3e-05
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		5e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		5e-05
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		7e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		7e-05
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		8e-05
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		8e-05
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		1e-04
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-04
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-04
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-04
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-04
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-04
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-04
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		2e-04
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-04
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-04
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-04
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		2e-04
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-04
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		3e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		3e-04
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		4e-04
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-04
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-04
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-04
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-04
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		4e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-04
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		4e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		4e-04
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		4e-04
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		4e-04
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		4e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-04
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-04
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		4e-04
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		4e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		4e-04
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		4e-04
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		5e-04
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		5e-04
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		5e-04
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		5e-04
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		5e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		5e-04
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		5e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-04
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		5e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		5e-04
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		5e-04
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		5e-04
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		5e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		5e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		5e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		5e-04
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		5e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		5e-04
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		5e-04
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		5e-04
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		5e-04
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		5e-04
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		5e-04
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		5e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-04
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		5e-04
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		5e-04
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		5e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		5e-04
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		6e-04
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		6e-04
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		6e-04
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		6e-04
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		6e-04
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		6e-04
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		6e-04
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		6e-04
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		6e-04
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		6e-04
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		6e-04
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		6e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		6e-04
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		6e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		6e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		6e-04
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		6e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		6e-04
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		6e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		6e-04
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		6e-04
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		6e-04
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		6e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		6e-04
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		6e-04
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		6e-04
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		6e-04
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		6e-04
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		7e-04
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		7e-04
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		7e-04
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-04
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		7e-04
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		7e-04
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		7e-04
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		7e-04
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		8e-04
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		8e-04
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		8e-04
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		8e-04
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		8e-04
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		8e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-04

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 97.8 bits (242), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 94/185 (50%), Gaps = 34/185 (18%)
Query: 22  LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------ 63
           LDW  R RI  G A+GL YLH +   +IIHRD+KA+NILLD                   
Sbjct: 128 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187
Query: 64  ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS---TAVYNTGSFN 108
                       G++ PEY   G  S K+DVF +GV++LE+++G+++     + N     
Sbjct: 188 DXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247
Query: 109 LLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI 168
           LL     L K+ ++  L+D V  Q       + + ++VALLC Q +  +RP MS+VV M+
Sbjct: 248 LLDWVKGLLKEKKLEALVD-VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
Query: 169 SNEHL 173
             + L
Sbjct: 307 EGDGL 311

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 97.8 bits (242), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 94/185 (50%), Gaps = 34/185 (18%)
Query: 22  LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------ 63
           LDW  R RI  G A+GL YLH +   +IIHRD+KA+NILLD                   
Sbjct: 136 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 195
Query: 64  ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS---TAVYNTGSFN 108
                       G++ PEY   G  S K+DVF +GV++LE+++G+++     + N     
Sbjct: 196 DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 255
Query: 109 LLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI 168
           LL     L K+ ++  L+D V  Q       + + ++VALLC Q +  +RP MS+VV M+
Sbjct: 256 LLDWVKGLLKEKKLEALVD-VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
Query: 169 SNEHL 173
             + L
Sbjct: 315 EGDGL 319

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 36/176 (20%)
Query: 22  LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------ 63
           + W+ R  I  G A+GL YLH  +   IIHRD+K+ NILLD                   
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTEL 192
Query: 64  -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS-TAVYNTGSFNL 109
                        GY+ PEY ++G  + KSDV+SFGV++ E+L  + +          NL
Sbjct: 193 GQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL 252
Query: 110 LGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVV 165
              A +   + ++ +++DP +  D+I    L ++   A+ C+  +  DRP+M DV+
Sbjct: 253 AEWAVESHNNGQLEQIVDPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 36/176 (20%)
Query: 22  LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------ 63
           + W+ R  I  G A+GL YLH  +   IIHRD+K+ NILLD                   
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTEL 192
Query: 64  -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS-TAVYNTGSFNL 109
                        GY+ PEY ++G  + KSDV+SFGV++ E+L  + +          NL
Sbjct: 193 DQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL 252
Query: 110 LGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVV 165
              A +   + ++ +++DP +  D+I    L ++   A+ C+  +  DRP+M DV+
Sbjct: 253 AEWAVESHNNGQLEQIVDPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 43/201 (21%)
Query: 5   LVYSKLLDAANIDKKRLLD------WQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASN 58
           LVY  + + + +D+   LD      W +R +I +G A G+ +LH+      IHRD+K++N
Sbjct: 107 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSAN 163
Query: 59  ILLD-------------------------------SGYMPPEYALRGFFSIKSDVFSFGV 87
           ILLD                               + YM PE ALRG  + KSD++SFGV
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGV 222
Query: 88  LMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA 147
           ++LEI++G  +   +      L        ++  + + ID  +  D  S S+   Y  VA
Sbjct: 223 VLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMY-SVA 280
Query: 148 LLCVQETVADRPTMSDVVSMI 168
             C+ E    RP +  V  ++
Sbjct: 281 SQCLHEKKNKRPDIKKVQQLL 301

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 43/201 (21%)
Query: 5   LVYSKLLDAANIDKKRLLD------WQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASN 58
           LVY  + + + +D+   LD      W +R +I +G A G+ +LH+      IHRD+K++N
Sbjct: 107 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSAN 163
Query: 59  ILLD-------------------------------SGYMPPEYALRGFFSIKSDVFSFGV 87
           ILLD                               + YM PE ALRG  + KSD++SFGV
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGV 222
Query: 88  LMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA 147
           ++LEI++G  +   +      L        ++  + + ID  +  D  S S+   Y  VA
Sbjct: 223 VLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMY-SVA 280
Query: 148 LLCVQETVADRPTMSDVVSMI 168
             C+ E    RP +  V  ++
Sbjct: 281 SQCLHEKKNKRPDIKKVQQLL 301

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 43/201 (21%)
Query: 5   LVYSKLLDAANIDKKRLLD------WQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASN 58
           LVY  + + + +D+   LD      W +R +I +G A G+ +LH+      IHRD+K++N
Sbjct: 101 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSAN 157
Query: 59  ILLD-------------------------------SGYMPPEYALRGFFSIKSDVFSFGV 87
           ILLD                               + YM PE ALRG  + KSD++SFGV
Sbjct: 158 ILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGV 216
Query: 88  LMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA 147
           ++LEI++G  +   +      L        ++  + + ID  +  D  S S+   Y  VA
Sbjct: 217 VLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMY-SVA 274
Query: 148 LLCVQETVADRPTMSDVVSMI 168
             C+ E    RP +  V  ++
Sbjct: 275 SQCLHEKKNKRPDIKKVQQLL 295

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 37/184 (20%)
Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD------------- 62
           +D    L W  R +I +G A G+ +LH+      IHRD+K++NILLD             
Sbjct: 115 LDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 171
Query: 63  ------------------SGYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNT 104
                             + Y  PE ALRG  + KSD++SFGV++LEI++G  +   +  
Sbjct: 172 RASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 230
Query: 105 GSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDV 164
               L        ++  + + ID     D  S S+   Y  VA  C+ E    RP +  V
Sbjct: 231 PQLLLDIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXY-SVASQCLHEKKNKRPDIKKV 288
Query: 165 VSMI 168
             ++
Sbjct: 289 QQLL 292

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 56/198 (28%)
Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
           I +KR  +    ARII+ +  G+ Y+H+++   I+HRDLK  NILL+S            
Sbjct: 113 IKRKRFSEHDA-ARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDF 168
Query: 65  --------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNT 104
                               Y+ PE  LRG +  K DV+S GV++  +LSG  +   Y  
Sbjct: 169 GLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG--TPPFYGK 225
Query: 105 GSFNLL------GHAWDL--WK--DDRVHELIDPVITQDEISLSMLMRYVKVALL---CV 151
             +++L       +A+DL  W+   D   +LI  ++T         +R      L    +
Sbjct: 226 NEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT-----FHPSLRITATQCLEHPWI 280
Query: 152 QETVADRPTMSDVVSMIS 169
           Q+  ++ PT+SD+ S+ S
Sbjct: 281 QKYSSETPTISDLPSLES 298

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 41/124 (33%)
Query: 8   SKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL------ 61
           +++L    I    L++W V+      IA+G+ YLH  + + IIHRDLK+SNIL+      
Sbjct: 94  NRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN 147
Query: 62  -----------DSG------------------YMPPEYALRGFFSIKSDVFSFGVLMLEI 92
                      D G                  +M PE      FS  SDV+S+GVL+ E+
Sbjct: 148 GDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWEL 207
Query: 93  LSGK 96
           L+G+
Sbjct: 208 LTGE 211

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 41/163 (25%)
Query: 35  AQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------------------YMP 67
           +QG+ YLH      +IHRDLK  N+LL +G                           +M 
Sbjct: 113 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMA 172
Query: 68  PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID 127
           PE      +S K DVFS+G+++ E+++ +K        +F ++   W +    R      
Sbjct: 173 PEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTR-----P 224
Query: 128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
           P+I      +  LM        C  +  + RP+M ++V ++++
Sbjct: 225 PLIKNLPKPIESLM------TRCWSKDPSQRPSMEEIVKIMTH 261

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 41/163 (25%)
Query: 35  AQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------------------YMP 67
           +QG+ YLH      +IHRDLK  N+LL +G                           +M 
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMA 171
Query: 68  PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID 127
           PE      +S K DVFS+G+++ E+++ +K        +F ++   W +    R      
Sbjct: 172 PEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTR-----P 223
Query: 128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
           P+I      +  LM        C  +  + RP+M ++V ++++
Sbjct: 224 PLIKNLPKPIESLM------TRCWSKDPSQRPSMEEIVKIMTH 260

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 48/157 (30%)
Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
           I +KR  +    ARII+ +  G+ Y+H+++   I+HRDLK  NILL+S            
Sbjct: 113 IKRKRFSEHDA-ARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDF 168
Query: 65  --------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNT 104
                               Y+ PE  LRG +  K DV+S GV++  +LSG  +   Y  
Sbjct: 169 GLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG--TPPFYGK 225
Query: 105 GSFNLL------GHAWDL--WK--DDRVHELIDPVIT 131
             +++L       +A+DL  W+   D   +LI  ++T
Sbjct: 226 NEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 48/157 (30%)
Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
           I +KR  +    ARII+ +  G+ Y+H+++   I+HRDLK  NILL+S            
Sbjct: 113 IKRKRFSEHDA-ARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDF 168
Query: 65  --------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNT 104
                               Y+ PE  LRG +  K DV+S GV++  +LSG  +   Y  
Sbjct: 169 GLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG--TPPFYGK 225
Query: 105 GSFNLL------GHAWDL--WK--DDRVHELIDPVIT 131
             +++L       +A+DL  W+   D   +LI  ++T
Sbjct: 226 NEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           +A G+ Y+    R+  IHRDL+++NIL+ +G                             
Sbjct: 114 VAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPI 170
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+++
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELVT 201

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 60/188 (31%)
Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL-------------- 61
           IDK + +   +  +I   I + L +LH  S+L +IHRD+K SN+L+              
Sbjct: 144 IDKGQTIPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
Query: 62  -----------DSGYMP--------PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVY 102
                      D+G  P        PE   +G+ S+KSD++S G+ M+E+          
Sbjct: 202 GYLVDSVAKTIDAGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELA--------- 251
Query: 103 NTGSFNLLGHAWDLWKDD-----RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVAD 157
                 +L   +D W        +V E   P +  D+ S      +V     C+++   +
Sbjct: 252 ------ILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS----AEFVDFTSQCLKKNSKE 301
Query: 158 RPTMSDVV 165
           RPT  +++
Sbjct: 302 RPTYPELM 309

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 33/124 (26%)
Query: 1   VCKKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNIL 60
           VC+ +    LLD    +  + L       +   IA G+ Y+    R+  +HRDL+A+NIL
Sbjct: 90  VCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANIL 146
Query: 61  L---------DSG---------------------YMPPEYALRGFFSIKSDVFSFGVLML 90
           +         D G                     +  PE AL G F+IKSDV+SFG+L+ 
Sbjct: 147 VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 206
Query: 91  EILS 94
           E+ +
Sbjct: 207 ELTT 210

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 58/189 (30%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------- 63
           ++ GI  G+ YL   S +  +HRDL A NIL++S                          
Sbjct: 136 MLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 192
Query: 64  -GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW 117
            G +P     PE      F+  SDV+S+G++M E++S       Y    +      WD+ 
Sbjct: 193 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS-------YGERPY------WDMS 239
Query: 118 KDDRVHELID----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL 173
             D +  + +    P      I+L  LM      L C Q+  +DRP    +V+M+     
Sbjct: 240 NQDVIKAIEEGYRLPPPMDCPIALHQLM------LDCWQKERSDRPKFGQIVNMLDKLIR 293
Query: 174 NLCSLKKLA 182
           N  SLK+  
Sbjct: 294 NPNSLKRTG 302

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 58/189 (30%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------- 63
           ++ GI  G+ YL   S +  +HRDL A NIL++S                          
Sbjct: 121 MLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
Query: 64  -GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW 117
            G +P     PE      F+  SDV+S+G++M E++S       Y    +      WD+ 
Sbjct: 178 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS-------YGERPY------WDMS 224
Query: 118 KDDRVHELID----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL 173
             D +  + +    P      I+L  LM      L C Q+  +DRP    +V+M+     
Sbjct: 225 NQDVIKAIEEGYRLPPPMDCPIALHQLM------LDCWQKERSDRPKFGQIVNMLDKLIR 278
Query: 174 NLCSLKKLA 182
           N  SLK+  
Sbjct: 279 NPNSLKRTG 287

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 58/189 (30%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------- 63
           ++ GI  G+ YL   S +  +HRDL A NIL++S                          
Sbjct: 115 MLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
Query: 64  -GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW 117
            G +P     PE      F+  SDV+S+G++M E++S       Y    +      WD+ 
Sbjct: 172 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS-------YGERPY------WDMS 218
Query: 118 KDDRVHELID----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL 173
             D +  + +    P      I+L  LM      L C Q+  +DRP    +V+M+     
Sbjct: 219 NQDVIKAIEEGYRLPPPMDCPIALHQLM------LDCWQKERSDRPKFGQIVNMLDKLIR 272
Query: 174 NLCSLKKLA 182
           N  SLK+  
Sbjct: 273 NPNSLKRTG 281

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 23/81 (28%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------------YMPPEYALR 73
           IA+G+ ++ Q +    IHRDL+A+NIL+ +                     +  PE    
Sbjct: 287 IAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINF 343
Query: 74  GFFSIKSDVFSFGVLMLEILS 94
           G F+IKSDV+SFG+L++EI++
Sbjct: 344 GSFTIKSDVWSFGILLMEIVT 364

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 60/189 (31%)
Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNIL--------------- 60
           IDK + +   +  +I   I + L +LH  S+L +IHRD+K SN+L               
Sbjct: 100 IDKGQTIPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
Query: 61  ----------LDSGYMP--------PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVY 102
                     +D+G  P        PE   +G +S+KSD++S G+ M+E+          
Sbjct: 158 GYLVDDVAKDIDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIEL---------- 206
Query: 103 NTGSFNLLGHAWDLWKDD-----RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVAD 157
                 +L   +D W        +V E   P +  D+ S      +V     C+++   +
Sbjct: 207 -----AILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS----AEFVDFTSQCLKKNSKE 257
Query: 158 RPTMSDVVS 166
           RPT  +++ 
Sbjct: 258 RPTYPELMQ 266

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 289 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 345
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 289 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 345
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 372 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 428
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 429 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 459

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 289 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 345
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 120 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPI 176
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 207

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 113 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI 169
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 170 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 200

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 290 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPI 346
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 347 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 377

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 120 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 176
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 207

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 114 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 170
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 201

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 116 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 172
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 173 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 203

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 112 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 168
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 169 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 199

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 123 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 123 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 123 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 123 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI 179
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 123 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL+A+NIL+         D G                    
Sbjct: 123 IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHRDL+A+NIL+         D G                    
Sbjct: 118 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 174
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 235 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 266

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHRDL+A+NIL+         D G                    
Sbjct: 124 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 180
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 240
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 241 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 272

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHRDL+A+NIL+         D G                    
Sbjct: 120 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 176
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 236
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 237 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 268

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHRDL+A+NIL+         D G                    
Sbjct: 119 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 175
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 235
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 236 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 267

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHRDL+A+NIL+         D G                    
Sbjct: 113 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 169
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 229
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 230 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 261

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHRDL+A+NIL+         D G                    
Sbjct: 124 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 180
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 240
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 241 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 272

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHRDL+A+NIL+         D G                    
Sbjct: 123 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 179
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 239
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 240 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 271

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHRDL+A+NIL+         D G                    
Sbjct: 127 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 183
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 243
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 244 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 275

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHRDL+A+NIL+         D G                    
Sbjct: 118 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 174
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 235 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 266

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHRDL+A+NIL+         D G                    
Sbjct: 118 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI 174
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 235 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 266

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHRDL+A+NIL+         D G                    
Sbjct: 118 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 174
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 235 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 266

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHRDL+A+NIL+         D G                    
Sbjct: 126 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 182
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 242
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 243 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 274

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHRDL+A+NIL+         D G                    
Sbjct: 128 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 184
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 244
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 245 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 276

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 60/187 (32%)
Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNIL--------------- 60
           IDK + +   +  +I   I + L +LH  S+L +IHRD+K SN+L               
Sbjct: 127 IDKGQTIPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
Query: 61  ----------LDSGYMP--------PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVY 102
                     +D+G  P        PE   +G +S+KSD++S G+  +E+          
Sbjct: 185 GYLVDDVAKDIDAGCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELA--------- 234
Query: 103 NTGSFNLLGHAWDLWKDD-----RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVAD 157
                 +L   +D W        +V E   P +  D+ S      +V     C+++   +
Sbjct: 235 ------ILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS----AEFVDFTSQCLKKNSKE 284
Query: 158 RPTMSDV 164
           RPT  ++
Sbjct: 285 RPTYPEL 291

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA G+ Y+    R+  +HRDL A+NIL+         D G                    
Sbjct: 123 IASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 52/197 (26%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-- 63
           +Y +LLD A+      + W V+ R++  IA G+ Y+ Q     I+HRDL++ NI L S  
Sbjct: 108 LYHRLLDKAHP-----IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLD 161
Query: 64  -----------------------------GYMPPEY--ALRGFFSIKSDVFSFGVLMLEI 92
                                         +M PE   A    ++ K+D +SF +++  I
Sbjct: 162 ENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221
Query: 93  LSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQ 152
           L+G+     Y+ G    +    +        E + P I +D        R   V  LC  
Sbjct: 222 LTGEGPFDEYSYGKIKFINMIRE--------EGLRPTIPED-----CPPRLRNVIELCWS 268
Query: 153 ETVADRPTMSDVVSMIS 169
                RP  S +V  +S
Sbjct: 269 GDPKKRPHFSYIVKELS 285

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 52/197 (26%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-- 63
           +Y +LLD A+      + W V+ R++  IA G+ Y+ Q     I+HRDL++ NI L S  
Sbjct: 108 LYHRLLDKAHP-----IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLD 161
Query: 64  -----------------------------GYMPPEY--ALRGFFSIKSDVFSFGVLMLEI 92
                                         +M PE   A    ++ K+D +SF +++  I
Sbjct: 162 ENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221
Query: 93  LSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQ 152
           L+G+     Y+ G    +    +        E + P I +D        R   V  LC  
Sbjct: 222 LTGEGPFDEYSYGKIKFINMIRE--------EGLRPTIPED-----CPPRLRNVIELCWS 268
Query: 153 ETVADRPTMSDVVSMIS 169
                RP  S +V  +S
Sbjct: 269 GDPKKRPHFSYIVKELS 285

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 52/197 (26%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-- 63
           +Y +LLD A+      + W V+ R++  IA G+ Y+ Q     I+HRDL++ NI L S  
Sbjct: 108 LYHRLLDKAHP-----IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLD 161
Query: 64  -----------------------------GYMPPEY--ALRGFFSIKSDVFSFGVLMLEI 92
                                         +M PE   A    ++ K+D +SF +++  I
Sbjct: 162 ENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221
Query: 93  LSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQ 152
           L+G+     Y+ G    +    +        E + P I +D        R   V  LC  
Sbjct: 222 LTGEGPFDEYSYGKIKFINMIRE--------EGLRPTIPED-----CPPRLRNVIELCWS 268
Query: 153 ETVADRPTMSDVVSMIS 169
                RP  S +V  +S
Sbjct: 269 GDPKKRPHFSYIVKELS 285

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           IA+G+ ++ + +    IHR+L+A+NIL+         D G                    
Sbjct: 114 IAEGMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 170
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK--STAVYNTGSFNLLGHAWDLWKDDR 121
            +  PE    G F+IKSDV+SFG+L+ EI++  +     + N      L   + + + D 
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 230
Query: 122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             E            L  LMR      LC +E   DRPT   + S++ +
Sbjct: 231 CPE-----------ELYQLMR------LCWKERPEDRPTFDYLRSVLED 262

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           IA+G+ ++ Q +    IHRDL+A+NIL+ +                              
Sbjct: 120 IAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 176
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE    G F+IKSDV+SFG+L++EI++
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           IA+G+ ++ Q +    IHRDL+A+NIL+ +                              
Sbjct: 293 IAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 349
Query: 65  -YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            +  PE    G F+IKSDV+SFG+L++EI++
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGYM--------------------------- 66
           IA+G+ Y+    R   IHRDL+A+N+L+    M                           
Sbjct: 119 IAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 175
Query: 67  ---PPEYALRGFFSIKSDVFSFGVLMLEILS 94
               PE    G F+IKSDV+SFG+L+ EI++
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 58/189 (30%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------- 63
           ++ GIA G+ YL   + +  +HRDL A NIL++S                          
Sbjct: 152 MLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS 208
Query: 64  -GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW 117
            G +P     PE      F+  SDV+SFG++M E+++       Y    +      W+L 
Sbjct: 209 GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT-------YGERPY------WELS 255
Query: 118 KDDRVHELIDPVITQDEISLSMLM----RYVKVALLCVQETVADRPTMSDVVSMISNEHL 173
                HE++  +   D   L   M       ++ + C Q+  A RP  +D+VS++     
Sbjct: 256 N----HEVMKAI--NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309
Query: 174 NLCSLKKLA 182
              SLK LA
Sbjct: 310 APDSLKTLA 318

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 47/177 (26%)
Query: 12  DAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------D 62
           D   + KK L + ++ A +  G  QGL YLH ++   +IHRD+KA NILL         D
Sbjct: 103 DLLEVHKKPLQEVEIAA-VTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGD 158
Query: 63  SG----------------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
            G                +M PE  L    G +  K DV+S G+  +E+   ++   ++N
Sbjct: 159 FGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL--AERKPPLFN 216
Query: 104 TGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPT 160
             + + L H         + +   P +     S      +V     C+Q+   DRPT
Sbjct: 217 MNAMSALYH---------IAQNESPALQSGHWS-EYFRNFVDS---CLQKIPQDRPT 260

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 47/177 (26%)
Query: 12  DAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------D 62
           D   + KK L + ++ A +  G  QGL YLH ++   +IHRD+KA NILL         D
Sbjct: 142 DLLEVHKKPLQEVEIAA-VTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGD 197
Query: 63  SG----------------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
            G                +M PE  L    G +  K DV+S G+  +E+   ++   ++N
Sbjct: 198 FGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL--AERKPPLFN 255
Query: 104 TGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPT 160
             + + L H         + +   P +     S      +V     C+Q+   DRPT
Sbjct: 256 MNAMSALYH---------IAQNESPALQSGHWS-EYFRNFVDS---CLQKIPQDRPT 299

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 55/188 (29%)
Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---- 64
           K  +LD    A I+  + +GL YLH+  +   IHRD+KA NILL         D G    
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAF 170
Query: 65  ---------------------YMPPEY--ALRGFFSIKSDVFSFGVLMLEILSGKKSTAV 101
                                +M PE    +RG +  K+D++SFG+  +E+ +G      
Sbjct: 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATGAAPYHK 229
Query: 102 YNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYV----KVALLCVQETVAD 157
           Y      +L    D            P +        ML +Y     K+  LC+Q+    
Sbjct: 230 YPPMKVLMLTLQND-----------PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEK 278
Query: 158 RPTMSDVV 165
           RPT ++++
Sbjct: 279 RPTAAELL 286

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 35/99 (35%)
Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------- 64
           ARII  +  G+ Y+H   + +I+HRDLK  N+LL+S                        
Sbjct: 129 ARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185
Query: 65  --------YMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                   Y+ PE  L G +  K DV+S GV++  +LSG
Sbjct: 186 KDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 55/188 (29%)
Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---- 64
           K  +LD    A I+  + +GL YLH+  +   IHRD+KA NILL         D G    
Sbjct: 109 KSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAF 165
Query: 65  ---------------------YMPPEY--ALRGFFSIKSDVFSFGVLMLEILSGKKSTAV 101
                                +M PE    +RG +  K+D++SFG+  +E+ +G      
Sbjct: 166 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATGAAPYHK 224
Query: 102 YNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYV----KVALLCVQETVAD 157
           Y      +L    D            P +        ML +Y     K+  LC+Q+    
Sbjct: 225 YPPMKVLMLTLQND-----------PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEK 273
Query: 158 RPTMSDVV 165
           RPT ++++
Sbjct: 274 RPTAAELL 281

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 35/99 (35%)
Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------- 64
           ARII  +  G+ Y+H   + +I+HRDLK  N+LL+S                        
Sbjct: 135 ARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 191
Query: 65  --------YMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                   Y+ PE  L G +  K DV+S GV++  +LSG
Sbjct: 192 KDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 36/111 (32%)
Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
           I +KR  +    ARII  +  G+ Y+H   + +I+HRDLK  N+LL+S            
Sbjct: 141 ISRKRFSEVDA-ARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDF 196
Query: 65  --------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                               Y+ PE  L G +  K DV+S GV++  +LSG
Sbjct: 197 GLSTHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 36/111 (32%)
Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
           I +KR  +    ARII  +  G+ Y+H   + +I+HRDLK  N+LL+S            
Sbjct: 142 ISRKRFSEVDA-ARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDF 197
Query: 65  --------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                               Y+ PE  L G +  K DV+S GV++  +LSG
Sbjct: 198 GLSTHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 76/193 (39%), Gaps = 64/193 (33%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------- 63
           ++ GIA G+ YL + S    +HRDL A NIL++S                          
Sbjct: 123 MLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETS 179
Query: 64  ---GYMP-----PEY-ALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHA 113
              G +P     PE  A R F S  SD +S+G++M E++S G++                
Sbjct: 180 SLGGKIPIRWTAPEAIAFRKFTS-ASDAWSYGIVMWEVMSFGERPY-------------- 224
Query: 114 WDLWKDDRVHELID----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS 169
           WD+   D ++ +      P       SL  LM      L C Q+    RP    VVS + 
Sbjct: 225 WDMSNQDVINAIEQDYRLPPPPDCPTSLHQLM------LDCWQKDRNARPRFPQVVSALD 278
Query: 170 NEHLNLCSLKKLA 182
               N  SLK +A
Sbjct: 279 KMIRNPASLKIVA 291

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 74/192 (38%), Gaps = 62/192 (32%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------- 63
           ++ GIA G+ YL + S    +HRDL A NIL++S                          
Sbjct: 121 MLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTS 177
Query: 64  ---GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAW 114
              G +P     PE      F+  SD +S+G++M E++S G++                W
Sbjct: 178 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY--------------W 223
Query: 115 DLWKDDRVHELID----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
           D+   D ++ +      P       SL  LM      L C Q+    RP    VVS +  
Sbjct: 224 DMSNQDVINAIEQDYRLPPPPDCPTSLHQLM------LDCWQKDRNARPRFPQVVSALDK 277
Query: 171 EHLNLCSLKKLA 182
              N  SLK +A
Sbjct: 278 MIRNPASLKIVA 289

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 53/164 (32%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           I+QG+ YL   + ++++HRDL A NIL+  G                             
Sbjct: 159 ISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIP 215
Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEI--LSGKKSTAVYNTGSFNLLGHAWDLWKDD 120
             +M  E      ++ +SDV+SFGVL+ EI  L G     +     FNLL          
Sbjct: 216 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG------- 268
Query: 121 RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDV 164
             H +  P    +E+         ++ L C ++    RP  +D+
Sbjct: 269 --HRMERPDNCSEEM--------YRLMLQCWKQEPDKRPVFADI 302

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 32/95 (33%)
Query: 42  HQYSRLRIIHRDLKASNILLD-SG---------------------------YMPPEY--- 70
           H    L+IIHRD+K SNILLD SG                           YM PE    
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDP 199
Query: 71  -ALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNT 104
            A R  + ++SDV+S G+ + E+ +G+     +N+
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATGRFPYPKWNS 234

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 53/164 (32%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           I+QG+ YL   + ++++HRDL A NIL+  G                             
Sbjct: 159 ISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIP 215
Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEI--LSGKKSTAVYNTGSFNLLGHAWDLWKDD 120
             +M  E      ++ +SDV+SFGVL+ EI  L G     +     FNLL          
Sbjct: 216 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG------- 268
Query: 121 RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDV 164
             H +  P    +E+         ++ L C ++    RP  +D+
Sbjct: 269 --HRMERPDNCSEEM--------YRLMLQCWKQEPDKRPVFADI 302

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 33/91 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGYM--------------------------- 66
           IA+G+ Y+    R   IHRDL+A+N+L+    M                           
Sbjct: 118 IAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 174
Query: 67  ---PPEYALRGFFSIKSDVFSFGVLMLEILS 94
               PE    G F+IKS+V+SFG+L+ EI++
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 33/117 (28%)
Query: 11  LDAANID----KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--- 63
           +D  ++D    K   +  Q+  ++   + +GL YL +  + +I+HRD+K SNIL++S   
Sbjct: 148 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE 205
Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                    YM PE      +S++SD++S G+ ++E+  G+
Sbjct: 206 IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 37/101 (36%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------------------- 64
           I    AQG+ YLH  +   IIHRD+K++NI L  G                         
Sbjct: 137 IARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193
Query: 65  ------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE         FS +SDV+S+G+++ E+++G+
Sbjct: 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 33/117 (28%)
Query: 11  LDAANID----KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--- 63
           +D  ++D    K   +  Q+  ++   + +GL YL +  + +I+HRD+K SNIL++S   
Sbjct: 86  MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE 143
Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                    YM PE      +S++SD++S G+ ++E+  G+
Sbjct: 144 IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 33/117 (28%)
Query: 11  LDAANID----KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--- 63
           +D  ++D    K   +  Q+  ++   + +GL YL +  + +I+HRD+K SNIL++S   
Sbjct: 86  MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE 143
Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                    YM PE      +S++SD++S G+ ++E+  G+
Sbjct: 144 IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 35/99 (35%)
Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------- 64
           ARII  +  G+ Y H   + +I+HRDLK  N+LL+S                        
Sbjct: 129 ARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKX 185
Query: 65  --------YMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                   Y+ PE  L G +  K DV+S GV++  +LSG
Sbjct: 186 KDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 33/117 (28%)
Query: 11  LDAANID----KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--- 63
           +D  ++D    K   +  Q+  ++   + +GL YL +  + +I+HRD+K SNIL++S   
Sbjct: 86  MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE 143
Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                    YM PE      +S++SD++S G+ ++E+  G+
Sbjct: 144 IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 33/117 (28%)
Query: 11  LDAANID----KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--- 63
           +D  ++D    K   +  Q+  ++   + +GL YL +  + +I+HRD+K SNIL++S   
Sbjct: 89  MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE 146
Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                    YM PE      +S++SD++S G+ ++E+  G+
Sbjct: 147 IKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 54/171 (31%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   +  + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 75  ------------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
                        ++I+SDV+SFGVL+ EI S          G+    G   D     R+
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFXRRL 260
Query: 123 HE---LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
            E   +  P  T  E+  +ML         C     + RPT S++V  + N
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLD--------CWHGEPSQRPTFSELVEHLGN 303

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 54/171 (31%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   +  + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 75  ------------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
                        ++I+SDV+SFGVL+ EI S          G+    G   D     R+
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCRRL 255
Query: 123 HE---LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
            E   +  P  T  E+  +ML         C     + RPT S++V  + N
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLD--------CWHGEPSQRPTFSELVEHLGN 298

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 34/92 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           +A+G+ +L   S    +HRDL A N+L+  G                             
Sbjct: 181 VAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP 237
Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
             +M PE    G ++IKSDV+S+G+L+ EI S
Sbjct: 238 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 54/171 (31%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   +  + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 75  ------------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
                        ++I+SDV+SFGVL+ EI S          G+    G   D     R+
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCRRL 307
Query: 123 HE---LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
            E   +  P  T  E+  +ML         C     + RPT S++V  + N
Sbjct: 308 KEGTRMRAPDYTTPEMYQTMLD--------CWHGEPSQRPTFSELVEHLGN 350

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 33/117 (28%)
Query: 11  LDAANID----KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--- 63
           +D  ++D    K   +  Q+  ++   + +GL YL +  + +I+HRD+K SNIL++S   
Sbjct: 105 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE 162
Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                    YM PE      +S++SD++S G+ ++E+  G+
Sbjct: 163 IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 112 VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 162
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 163 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 63/164 (38%), Gaps = 53/164 (32%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           I+QG+ YL + S   ++HRDL A NIL+  G                             
Sbjct: 159 ISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIP 215
Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEI--LSGKKSTAVYNTGSFNLLGHAWDLWKDD 120
             +M  E      ++ +SDV+SFGVL+ EI  L G     +     FNLL          
Sbjct: 216 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG------- 268
Query: 121 RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDV 164
             H +  P    +E+         ++ L C ++    RP  +D+
Sbjct: 269 --HRMERPDNCSEEM--------YRLMLQCWKQEPDKRPVFADI 302

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 54/171 (31%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   +  + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 75  ------------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
                        ++I+SDV+SFGVL+ EI S          G+    G   D     R+
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCRRL 255
Query: 123 HE---LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
            E   +  P  T  E+  +ML         C     + RPT S++V  + N
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLD--------CWHGEPSQRPTFSELVEHLGN 298

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 33/131 (25%)
Query: 11  LDAANID----KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--- 63
           +D  ++D    K   +  Q+  ++   + +GL YL +  + +I+HRD+K SNIL++S   
Sbjct: 113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE 170
Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST 99
                                    YM PE      +S++SD++S G+ ++E+  G+   
Sbjct: 171 IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
Query: 100 AVYNTGSFNLL 110
              +     L+
Sbjct: 231 PPPDAKELELM 241

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 33/131 (25%)
Query: 11  LDAANID----KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--- 63
           +D  ++D    K   +  Q+  ++   + +GL YL +  + +I+HRD+K SNIL++S   
Sbjct: 86  MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE 143
Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST 99
                                    YM PE      +S++SD++S G+ ++E+  G+   
Sbjct: 144 IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 100 AVYNTGSFNLL 110
              +     L+
Sbjct: 204 PPPDAKELELM 214

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 33/131 (25%)
Query: 11  LDAANID----KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--- 63
           +D  ++D    K   +  Q+  ++   + +GL YL +  + +I+HRD+K SNIL++S   
Sbjct: 86  MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE 143
Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST 99
                                    YM PE      +S++SD++S G+ ++E+  G+   
Sbjct: 144 IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 100 AVYNTGSFNLL 110
              +     L+
Sbjct: 204 PPPDAKELELM 214

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 54/171 (31%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   +  + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 75  ------------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
                        ++I+SDV+SFGVL+ EI S          G+    G   D     R+
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCRRL 309
Query: 123 HE---LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
            E   +  P  T  E+  +ML         C     + RPT S++V  + N
Sbjct: 310 KEGTRMRAPDYTTPEMYQTMLD--------CWHGEPSQRPTFSELVEHLGN 352

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 33/112 (29%)
Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSGY- 65
           + + RL + Q+ A + E + Q L YLH      +IHRD+K+ +ILL         D G+ 
Sbjct: 133 VSQVRLNEEQI-ATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFC 188
Query: 66  -------------------MPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS 98
                              M PE   R  ++ + D++S G++++E++ G+  
Sbjct: 189 AQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 121 VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 171
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 172 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 39/95 (41%), Gaps = 37/95 (38%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLD---------------------SGY------- 65
           IA G  YL +      IHRD+ A N LL                      +GY       
Sbjct: 190 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 246
Query: 66  ------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                 MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 247 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 100 VYKELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 150
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 151 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 39/95 (41%), Gaps = 37/95 (38%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLD---------------------SGY------- 65
           IA G  YL +      IHRD+ A N LL                      +GY       
Sbjct: 167 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 223
Query: 66  ------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                 MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 224 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 97  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 147
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 148 ELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 37/101 (36%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---------------- 64
           I    AQG+ YLH  S   IIHRDLK++NI L         D G                
Sbjct: 129 IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 185
Query: 65  ------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE      +  +S +SDV++FG+++ E+++G+
Sbjct: 186 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 30/123 (24%)
Query: 1   VCKKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNIL 60
           +C + +    LD    + KR+ + ++  ++   + +GL YL +  + +I+HRD+K SNIL
Sbjct: 91  ICMEHMDGGSLDQVLKEAKRIPE-EILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNIL 147
Query: 61  LDS---------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEIL 93
           ++S                            YM PE      +S++SD++S G+ ++E+ 
Sbjct: 148 VNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELA 207
Query: 94  SGK 96
            G+
Sbjct: 208 VGR 210

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 54/171 (31%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   +  + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 75  ------------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
                        ++I+SDV+SFGVL+ EI S          G+    G   D     R+
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCRRL 314
Query: 123 HE---LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
            E   +  P  T  E+  +ML         C     + RPT S++V  + N
Sbjct: 315 KEGTRMRAPDYTTPEMYQTMLD--------CWHGEPSQRPTFSELVEHLGN 357

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 54/171 (31%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   +  + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 75  ------------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
                        ++I+SDV+SFGVL+ EI S          G+    G   D     R+
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCRRL 316
Query: 123 HE---LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
            E   +  P  T  E+  +ML         C     + RPT S++V  + N
Sbjct: 317 KEGTRMRAPDYTTPEMYQTMLD--------CWHGEPSQRPTFSELVEHLGN 359

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 121 VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 171
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 172 ELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 37/101 (36%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---------------- 64
           I    AQG+ YLH  S   IIHRDLK++NI L         D G                
Sbjct: 136 IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 192
Query: 65  ------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE      +  +S +SDV++FG+++ E+++G+
Sbjct: 193 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 9/62 (14%)
Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEI 92
           G+AQ + Y   Y R        K    +L   +MPPE  + G F+ K+D +SFGVL+ EI
Sbjct: 189 GMAQDI-YRASYYR--------KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 93  LS 94
            S
Sbjct: 240 FS 241

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 98  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 148
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 149 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 35/97 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           +A G++YL   + L  +HRDL   N L+  G                             
Sbjct: 144 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKS 98
             +MPPE  L   F+ +SDV+SFGV++ EI + GK+ 
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 30/105 (28%)
Query: 19  KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY------------- 65
           +  LD + R  +   +A+G+ YLH  +   I+HRDLK+ N+L+D  Y             
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK 189
Query: 66  ----------------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                           M PE       + KSDV+SFGV++ E+ +
Sbjct: 190 ASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 54/171 (31%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   +  + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 194 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 250
Query: 75  ------------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
                        ++I+SDV+SFGVL+ EI S          G+    G   D     R+
Sbjct: 251 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCRRL 301
Query: 123 HE---LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
            E   +  P  T  E+  +ML         C     + RPT S++V  + N
Sbjct: 302 KEGTRMRAPDYTTPEMYQTMLD--------CWHGEPSQRPTFSELVEHLGN 344

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 37/101 (36%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---------------- 64
           I    AQG+ YLH  S   IIHRDLK++NI L         D G                
Sbjct: 137 IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 193
Query: 65  ------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE      +  +S +SDV++FG+++ E+++G+
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 55  KASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
           K    +L   +MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 37/101 (36%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---------------- 64
           I    AQG+ YLH  S   IIHRDLK++NI L         D G                
Sbjct: 137 IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 193
Query: 65  ------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE      +  +S +SDV++FG+++ E+++G+
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 55  KASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
           K    +L   +MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 100 VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 150
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 151 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 97  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 147
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 148 ELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 35/97 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           +A G++YL   + L  +HRDL   N L+  G                             
Sbjct: 138 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKS 98
             +MPPE  L   F+ +SDV+SFGV++ EI + GK+ 
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 96  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 146
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 147 ELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 55  KASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
           K    +L   +MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 54/171 (31%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   +  + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 213
Query: 75  ------------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
                        ++I+SDV+SFGVL+ EI S          G+    G   D     R+
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCRRL 264
Query: 123 HE---LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
            E   +  P  T  E+  +ML         C     + RPT S++V  + N
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLD--------CWHGEPSQRPTFSELVEHLGN 307

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 95  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 145
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 146 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 96  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 146
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 147 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 95  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 145
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 146 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 54/171 (31%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   +  + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 159 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 215
Query: 75  ------------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
                        ++I+SDV+SFGVL+ EI S          G+    G   D     R+
Sbjct: 216 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCRRL 266
Query: 123 HE---LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
            E   +  P  T  E+  +ML         C     + RPT S++V  + N
Sbjct: 267 KEGTRMRAPDYTTPEMYQTMLD--------CWHGEPSQRPTFSELVEHLGN 309

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 55  KASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
           K    +L   +MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 55  KASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
           K    +L   +MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 218 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 95  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 145
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 146 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 55  KASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
           K    +L   +MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 228 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 34/97 (35%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------------------- 64
           ++  I+  L YLH+    RIIHRDLK  NI+L  G                         
Sbjct: 127 LLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 183
Query: 65  ------YMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                 Y+ PE   +  +++  D +SFG L  E ++G
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 34/97 (35%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------------------- 64
           ++  I+  L YLH+    RIIHRDLK  NI+L  G                         
Sbjct: 126 LLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 182
Query: 65  ------YMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                 Y+ PE   +  +++  D +SFG L  E ++G
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 55  KASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
           K    +L   +MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 193 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 100 VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 150
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 151 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 55  KASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
           K    +L   +MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 95  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 145
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 146 ELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 55  KASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
           K    +L   +MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 208 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 55  KASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
           K    +L   +MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 37/101 (36%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---------------- 64
           I    AQG+ YLH  S   IIHRDLK++NI L         D G                
Sbjct: 109 IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 165
Query: 65  ------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE      +  +S +SDV++FG+++ E+++G+
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 40/111 (36%)
Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL------------- 61
           NI  + LL+W V+      IA+G++YL +    R++HRDL A N+L+             
Sbjct: 136 NIGSQLLLNWCVQ------IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGL 186
Query: 62  -------------DSGYMPPEY-ALRGF----FSIKSDVFSFGVLMLEILS 94
                        D G MP ++ AL       F+ +SDV+S+GV + E+++
Sbjct: 187 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 37/101 (36%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---------------- 64
           I    AQG+ YLH  S   IIHRDLK++NI L         D G                
Sbjct: 111 IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 167
Query: 65  ------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE      +  +S +SDV++FG+++ E+++G+
Sbjct: 168 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 37/101 (36%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---------------- 64
           I    AQG+ YLH  S   IIHRDLK++NI L         D G                
Sbjct: 114 IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 65  ------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE      +  +S +SDV++FG+++ E+++G+
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 96  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 146
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 147 ELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 37/101 (36%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---------------- 64
           I    AQG+ YLH  S   IIHRDLK++NI L         D G                
Sbjct: 109 IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 65  ------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE      +  +S +SDV++FG+++ E+++G+
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 100 VYKELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 150
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 151 ELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 37/101 (36%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---------------- 64
           I    AQG+ YLH  S   IIHRDLK++NI L         D G                
Sbjct: 109 IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 65  ------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE      +  +S +SDV++FG+++ E+++G+
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 98  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 148
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 149 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 55  KASNILLDSGYMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
           K    +L   +MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 69/175 (39%), Gaps = 58/175 (33%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------- 63
           ++ GIA G+ YL   + +  +HRDL A NIL++S                          
Sbjct: 150 MLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTT 206
Query: 64  -GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW 117
            G +P     PE      F+  SDV+S+G++M E++S       Y    +      WD+ 
Sbjct: 207 GGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS-------YGERPY------WDMS 253
Query: 118 KDDRVHELID----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI 168
             D +  + +    P        L  LM      L C Q+  A+RP    +V ++
Sbjct: 254 NQDVIKAIEEGYRLPAPMDCPAGLHQLM------LDCWQKERAERPKFEQIVGIL 302

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 37/101 (36%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG---------------- 64
           I    AQG+ YLH  S   IIHRDLK++NI L         D G                
Sbjct: 114 IARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 65  ------YMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE      +  +S +SDV++FG+++ E+++G+
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 98  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 148
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 149 ELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 75/191 (39%), Gaps = 58/191 (30%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------- 63
           ++ G+  G+ YL   S L  +HRDL A N+L+DS                          
Sbjct: 156 MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTT 212
Query: 64  -GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW 117
            G +P     PE      FS  SDV+SFGV+M E+L+       Y    +      W++ 
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA-------YGERPY------WNMT 259
Query: 118 KDDRVHELID----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL 173
             D +  + +    P       +L  LM      L C  +  A RP  S +VS++     
Sbjct: 260 NRDVISSVEEGYRLPAPMGCPHALHQLM------LDCWHKDRAQRPRFSQIVSVLDALIR 313
Query: 174 NLCSLKKLAFV 184
           +  SL+  A V
Sbjct: 314 SPESLRATATV 324

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 94  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 144
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 145 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 100 VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 150
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 151 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 98  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 148
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 149 ELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 35/97 (36%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           +A G++YL   + L  +HRDL   N L+  G                             
Sbjct: 167 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 223
Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKS 98
             +MPPE  L   F+ +SDV+SFGV++ EI + GK+ 
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 75/191 (39%), Gaps = 58/191 (30%)
Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------- 63
           ++ G+  G+ YL   S L  +HRDL A N+L+DS                          
Sbjct: 156 MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTT 212
Query: 64  -GYMP-----PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW 117
            G +P     PE      FS  SDV+SFGV+M E+L+       Y    +      W++ 
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA-------YGERPY------WNMT 259
Query: 118 KDDRVHELID----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL 173
             D +  + +    P       +L  LM      L C  +  A RP  S +VS++     
Sbjct: 260 NRDVISSVEEGYRLPAPMGCPHALHQLM------LDCWHKDRAQRPRFSQIVSVLDALIR 313
Query: 174 NLCSLKKLAFV 184
           +  SL+  A V
Sbjct: 314 SPESLRATATV 324

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 54/171 (31%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-----YMPPEYALRG----- 74
           +A+G+ +L   +  + IHRDL A NILL         D G     Y  P+Y  +G     
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 75  ------------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
                        ++I+SDV+SFGVL+ EI S          G+    G   D     R+
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCRRL 260
Query: 123 HE---LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
            E   +  P  T  E+  +ML         C     + RPT S++V  + N
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLD--------CWHGEPSQRPTFSELVEHLGN 303

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 98  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 148
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 149 ELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 92  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 142
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 143 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 95  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 145
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 146 ELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 95  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 145
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 146 ELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 38/105 (36%)
Query: 29  RIIEGIA---QGLLYLHQYSRLRIIHRDLKASNILL------------------DSG--- 64
           R IE IA   Q L + HQ     IIHRD+K +NIL+                  DSG   
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSV 173
Query: 65  -----------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS 98
                      Y+ PE A       +SDV+S G ++ E+L+G+  
Sbjct: 174 XQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 99  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 149
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 150 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 95  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 145
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 146 ELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 32/91 (35%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           +A GL +LH    L II+RDLK  NILLD                               
Sbjct: 139 LALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVE 195
Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
           YM PE   R   S  +D +S+GVLM E+L+G
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 40/111 (36%)
Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL------------- 61
           NI  + LL+W V+      IA+G++YL +    R++HRDL A N+L+             
Sbjct: 113 NIGSQLLLNWCVQ------IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGL 163
Query: 62  -------------DSGYMPPEY-ALRGF----FSIKSDVFSFGVLMLEILS 94
                        D G MP ++ AL       F+ +SDV+S+GV + E+++
Sbjct: 164 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 36/118 (30%)
Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG- 64
           VY +L   +  D++R       A  I  +A  L Y H     R+IHRD+K  N+LL S  
Sbjct: 98  VYRELQKLSKFDEQRT------ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAG 148
Query: 65  --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y+PPE         K D++S GVL  E L GK
Sbjct: 149 ELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 68/171 (39%), Gaps = 54/171 (31%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           +A+G+ +L   +  + IHRDL A NILL         D G                    
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
             +M PE      ++I+SDV+SFGVL+ EI S          G+    G   D     R+
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCRRL 255
Query: 123 HE---LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
            E   +  P  T  E+  +ML         C     + RPT S++V  + N
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLD--------CWHGEPSQRPTFSELVEHLGN 298

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 68/171 (39%), Gaps = 54/171 (31%)
Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------DSG-------------------- 64
           +A+G+ +L   +  + IHRDL A NILL         D G                    
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV 122
             +M PE      ++I+SDV+SFGVL+ EI S          G+    G   D     R+
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LGASPYPGVKIDEEFCRRL 255
Query: 123 HE---LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
            E   +  P  T  E+  +ML         C     + RPT S++V  + N
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLD--------CWHGEPSQRPTFSELVEHLGN 298

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	216
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-61
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-55
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	9e-49
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-35
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-25
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-23
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-21
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-20
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-20
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-19
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-19
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-19
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-19
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	4e-19
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	7e-18
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	9e-18
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-17
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	5e-17
3q4u_A	301	Activin receptor type-1; structural genomics conso	9e-17
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	9e-17
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-16
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-16
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-15
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-15
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	6e-15
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-14
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-14
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-14
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-14
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-14
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	6e-14
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	7e-14
3aln_A	327	Dual specificity mitogen-activated protein kinase;	9e-14
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-13
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-13
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-13
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-13
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-13
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-13
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-13
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-13
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-13
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-13
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-13
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-13
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-13
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-13
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-13
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-13
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-13
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-13
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-13
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-13
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-13
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-13
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-13
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	4e-13
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	4e-13
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-13
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	5e-13
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	6e-13
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	7e-13
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	7e-13
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	8e-13
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	8e-13
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	9e-13
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-12
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-12
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-12
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-12
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-12
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-12
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-12
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-12
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-12
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-12
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	6e-12
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	6e-12
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-11
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-11
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-11
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-11
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-11
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-11
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-11
3ork_A	311	Serine/threonine protein kinase; structural genomi	5e-11
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	7e-11
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	9e-11
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-10
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-10
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	4e-10
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	7e-10
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	9e-10
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-09
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-09
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-09
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-09
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-09
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	4e-09
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-09
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-09
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	9e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-08
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-08
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-08
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-08
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-08
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-08
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-08
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-08
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	9e-08
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-07
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-07
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	4e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-07
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	5e-07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-07
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	6e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	8e-07
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	9e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-06
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-06
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-06
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-06
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-06
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-06
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-06
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-06
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-06
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-06
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-06
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-06
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-06
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-06
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-06
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	3e-06
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-06
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-06
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	6e-06
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	6e-06
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-06
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	6e-06
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	7e-06
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	7e-06
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	7e-06
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	8e-06
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	8e-06
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	8e-06
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	8e-06
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	8e-06
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-05
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-05
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-05
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-05
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-05
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-05
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-05
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-05
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-05
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-05
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-05
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-05
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-05
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-05
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	4e-05
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-05
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	4e-05
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	5e-05
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-05
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	7e-05
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	7e-05
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	7e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	7e-05
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	8e-05
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-04
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-04
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	4e-04
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	4e-04
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	5e-04
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	5e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	5e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	5e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-04
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	7e-04
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	7e-04
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	7e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  193 bits (494), Expect = 1e-61
 Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 45/211 (21%)

Query: 5   LVY---------SKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLK 55
           LVY         S L +    + +  LDW  R RI  G A+GL YLH +   +IIHRD+K
Sbjct: 104 LVYPYMANGSVASCLRERP--ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVK 161

Query: 56  ASNILLDS------------------------------GYMPPEYALRGFFSIKSDVFSF 85
           A+NILLD                               G++ PEY   G  S K+DVF +
Sbjct: 162 AANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 221

Query: 86  GVLMLEILSGKKST---AVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMR 142
           GV++LE+++G+++     + N     LL     L K+ ++  L+D  + Q       + +
Sbjct: 222 GVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL-QGNYKDEEVEQ 280

Query: 143 YVKVALLCVQETVADRPTMSDVVSMISNEHL 173
            ++VALLC Q +  +RP MS+VV M+  + L
Sbjct: 281 LIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  176 bits (450), Expect = 4e-55
 Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 39/185 (21%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------- 63
           D    L W +R +I +G A G+ +LH+      IHRD+K++NILLD              
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLAR 181

Query: 64  ------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTG 105
                              YM PE  LRG  + KSD++SFGV++LEI++G  +    +  
Sbjct: 182 ASEKFAQTVMTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVD-EHRE 239

Query: 106 SFNLLGHAWDLWKDDR-VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDV 164
              LL    ++  +++ + + ID  +  ++   + +     VA  C+ E    RP +  V
Sbjct: 240 PQLLLDIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297

Query: 165 VSMIS 169
             ++ 
Sbjct: 298 QQLLQ 302

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  161 bits (409), Expect = 9e-49
 Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 36/179 (20%)

Query: 22  LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------ 63
           + W+ R  I  G A+GL YLH  +   IIHRD+K+ NILLD                   
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTEL 192

Query: 64  -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST-AVYNTGSFNL 109
                        GY+ PEY ++G  + KSDV+SFGV++ E+L  + +          NL
Sbjct: 193 DQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL 252

Query: 110 LGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI 168
              A +   + ++ +++DP +  D+I    L ++   A+ C+  +  DRP+M DV+  +
Sbjct: 253 AEWAVESHNNGQLEQIVDPNL-ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  125 bits (317), Expect = 3e-35
 Identities = 37/202 (18%), Positives = 68/202 (33%), Gaps = 49/202 (24%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQ-------YSRLRIIHRDLKASNILLDS------- 63
           K  ++ W     I E +A+GL YLH+         +  I HRD+K+ N+LL +       
Sbjct: 114 KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173

Query: 64  ------------------------GYMPPEYA-----LRGFFSIKSDVFSFGVLMLEILS 94
                                    YM PE        +    ++ D+++ G+++ E+ S
Sbjct: 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233

Query: 95  GKKSTAV----YNTGSFNLLGHAWDL--WKDDRVHELIDPVITQDEISLSMLMRYVKVAL 148
              +       Y       +G    L   ++  VH+   PV+       + +    +   
Sbjct: 234 RCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIE 293

Query: 149 LCVQETVADRPTMSDVVSMISN 170
            C       R +   V   I+ 
Sbjct: 294 ECWDHDAEARLSAGCVGERITQ 315

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  100 bits (251), Expect = 1e-25
 Identities = 29/213 (13%), Positives = 60/213 (28%), Gaps = 61/213 (28%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQ------YSRLRIIHRDLKASNILLDS-------- 63
                DW    R+   + +GL YLH       + +  I HRDL + N+L+ +        
Sbjct: 104 SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163

Query: 64  -----------------------------GYMPPEYALRGFFSI--------KSDVFSFG 86
                                         YM PE  L G  ++        + D+++ G
Sbjct: 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEV-LEGAVNLRDXESALKQVDMYALG 222

Query: 87  VLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDE---------ISL 137
           ++  EI           +     +    ++       ++   V  + +          + 
Sbjct: 223 LIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENS 282

Query: 138 SMLMRYVKVALLCVQETVADRPTMSDVVSMISN 170
             +    +    C  +    R T       ++ 
Sbjct: 283 LAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 94.7 bits (236), Expect = 1e-23
 Identities = 37/184 (20%), Positives = 69/184 (37%), Gaps = 43/184 (23%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------- 64
             +                 +QG+ YLH      +IHRDLK  N+LL +G          
Sbjct: 92  GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 151

Query: 65  -----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF 107
                            +M PE      +S K DVFS+G+++ E+++ +K    ++    
Sbjct: 152 TACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK---PFDEIGG 208

Query: 108 NLLGHAWDLWKDDRVHELIDPVITQD-EISLSMLMRYVKVALLCVQETVADRPTMSDVVS 166
                 W +    R      P + ++    +  LM        C  +  + RP+M ++V 
Sbjct: 209 PAFRIMWAVHNGTR------PPLIKNLPKPIESLMT------RCWSKDPSQRPSMEEIVK 256

Query: 167 MISN 170
           ++++
Sbjct: 257 IMTH 260

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 86.6 bits (215), Expect = 9e-21
 Identities = 42/186 (22%), Positives = 69/186 (37%), Gaps = 49/186 (26%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------ 64
           DK   + W V+ R++  IA G+ Y+       I+HRDL++ NI L S             
Sbjct: 114 DKAHPIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172

Query: 65  -------------------YMPPE--YALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
                              +M PE   A    ++ K+D +SF +++  IL+G+     Y+
Sbjct: 173 FGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232

Query: 104 TGSFNLLGHAWDLWKDDRVHELIDPVITQD-EISLSMLMRYVKVALLCVQETVADRPTMS 162
            G    +       +  R      P I +D    L  ++       LC       RP  S
Sbjct: 233 YGKIKFINMI--REEGLR------PTIPEDCPPRLRNVIE------LCWSGDPKKRPHFS 278

Query: 163 DVVSMI 168
            +V  +
Sbjct: 279 YIVKEL 284

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 85.8 bits (213), Expect = 1e-20
 Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 35/114 (30%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------- 64
             + +   +       IA+G+ YLH  + + IIHRDLK+SNIL+                
Sbjct: 98  SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI 157

Query: 65  ----------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                 +M PE      FS  SDV+S+GVL+ E+L+G+
Sbjct: 158 TDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 83.9 bits (208), Expect = 1e-19
 Identities = 34/193 (17%), Positives = 63/193 (32%), Gaps = 62/193 (32%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------ 64
             +   + +    I    A+G+ YLH      IIHRDLK++NI L               
Sbjct: 112 ASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLAT 168

Query: 65  -------------------YMPPE---YALRGFFSIKSDVFSFGVLMLEILSGKK----- 97
                              +M PE         +S +SDV++FG+++ E+++G+      
Sbjct: 169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228

Query: 98  --STAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETV 155
                +        L                          +  LM        C+++  
Sbjct: 229 NNRDQIIEMVGRGSL----------SPDLSKVRSNCPKR--MKRLMA------ECLKKKR 270

Query: 156 ADRPTMSDVVSMI 168
            +RP+   +++ I
Sbjct: 271 DERPSFPRILAEI 283

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 83.1 bits (206), Expect = 3e-19
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 32/110 (29%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------- 63
             +  LD + R  +   +A+G+ YLH      I+HR+LK+ N+L+D              
Sbjct: 129 GAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187

Query: 64  ----------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGK 96
                            +M PE  LR    + KSDV+SFGV++ E+ + +
Sbjct: 188 LKASTFLSSKSAAGTPEWMAPE-VLRDEPSNEKSDVYSFGVILWELATLQ 236

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 83.2 bits (206), Expect = 3e-19
 Identities = 35/195 (17%), Positives = 53/195 (27%), Gaps = 62/195 (31%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY----------- 65
                  W  R    + IA G+ YLH    + IIHRDL + N L+               
Sbjct: 100 SMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLAR 156

Query: 66  --------------------------------MPPEYALRGFFSIKSDVFSFGVLMLEIL 93
                                           M PE      +  K DVFSFG+++ EI+
Sbjct: 157 LMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216

Query: 94  SGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQD-EISLSMLMRYVKVALLCVQ 152
                 A  +     +            V   +D     +   S   +       + C  
Sbjct: 217 GRVN--ADPDYLPRTMDFGL-------NVRGFLDRYCPPNCPPSFFPIT------VRCCD 261

Query: 153 ETVADRPTMSDVVSM 167
                RP+   +   
Sbjct: 262 LDPEKRPSFVKLEHW 276

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 82.8 bits (205), Expect = 3e-19
 Identities = 38/202 (18%), Positives = 72/202 (35%), Gaps = 76/202 (37%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------ 64
           D K +LD     +I + I +G+ YLH      I+H+DLK+ N+  D+G            
Sbjct: 122 DAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYDNGKVVITDFGLFSI 178

Query: 65  ---------------------YMPPE---------YALRGFFSIKSDVFSFGVLMLEILS 94
                                ++ PE            +  FS  SDVF+ G +  E+ +
Sbjct: 179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA 238

Query: 95  GKK------STAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEI--SLSMLMRYVKV 146
            +       + A+            W +    +      P ++Q  +   +S ++ +   
Sbjct: 239 REWPFKTQPAEAI-----------IWQMGTGMK------PNLSQIGMGKEISDILLF--- 278

Query: 147 ALLCVQETVADRPTMSDVVSMI 168
              C      +RPT + ++ M+
Sbjct: 279 ---CWAFEQEERPTFTKLMDML 297

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 81.9 bits (203), Expect = 4e-19
 Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 30/108 (27%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------- 63
               ++D     +    +A+G+ +LH    L I    L + ++++D              
Sbjct: 103 GTNFVVDQSQAVKFALDMARGMAFLHTLEPL-IPRHALNSRSVMIDEDMTARISMADVKF 161

Query: 64  -----------GYMPPEYALRG----FFSIKSDVFSFGVLMLEILSGK 96
                       ++ PE AL+          +D++SF VL+ E+++ +
Sbjct: 162 SFQSPGRMYAPAWVAPE-ALQKKPEDTNRRSADMWSFAVLLWELVTRE 208

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 79.3 bits (196), Expect = 7e-18
 Identities = 54/224 (24%), Positives = 81/224 (36%), Gaps = 58/224 (25%)

Query: 14  ANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY-------- 65
           A +D  RLL +         I +G+ YL      R +HRDL A NIL++S          
Sbjct: 122 ARLDASRLLLYSS------QICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFG 172

Query: 66  ------------------------MPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTA 100
                                     PE      FS +SDV+SFGV++ E+ +   KS +
Sbjct: 173 LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS 232

Query: 101 VYNTGSFNLLGHAWDLWKDDRVHELID-------PVITQDEISLSMLMRYVKVALLCVQE 153
                   ++G   D+    R+ EL++       P     E+    LM       LC   
Sbjct: 233 PS-AEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEV--HELM------KLCWAP 283

Query: 154 TVADRPTMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNSSHSNS 197
           +  DRP+ S +   +          +  AF      K+ S S S
Sbjct: 284 SPQDRPSFSALGPQLDMLWSGSRGCETHAFTAHPEGKHHSLSFS 327

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 78.9 bits (195), Expect = 9e-18
 Identities = 43/197 (21%), Positives = 67/197 (34%), Gaps = 57/197 (28%)

Query: 14  ANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY-------- 65
             ID  +LL +         I +G+ YL      R IHRDL   NIL+++          
Sbjct: 109 ERIDHIKLLQYTS------QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFG 159

Query: 66  ------------------------MPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAV 101
                                     PE      FS+ SDV+SFGV++ E+ +  + +  
Sbjct: 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219

Query: 102 YNTGSFNLLGHA-WDLWKDDRVHELID-------PVITQDEISLSMLMRYVKVALLCVQE 153
                  ++G+          + EL+        P    DEI   M+M        C   
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI--YMIM------TECWNN 271

Query: 154 TVADRPTMSDVVSMISN 170
            V  RP+  D+   +  
Sbjct: 272 NVNQRPSFRDLALRVDQ 288

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 78.2 bits (193), Expect = 2e-17
 Identities = 43/197 (21%), Positives = 67/197 (34%), Gaps = 57/197 (28%)

Query: 14  ANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY-------- 65
             ID  +LL +         I +G+ YL      R IHRDL   NIL+++          
Sbjct: 140 ERIDHIKLLQYTS------QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFG 190

Query: 66  ------------------------MPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAV 101
                                     PE      FS+ SDV+SFGV++ E+ +  + +  
Sbjct: 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250

Query: 102 YNTGSFNLLGHA-WDLWKDDRVHELID-------PVITQDEISLSMLMRYVKVALLCVQE 153
                  ++G+          + EL+        P    DEI   M+M        C   
Sbjct: 251 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEI--YMIM------TECWNN 302

Query: 154 TVADRPTMSDVVSMISN 170
            V  RP+  D+   +  
Sbjct: 303 NVNQRPSFRDLALRVDQ 319

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 77.1 bits (190), Expect = 5e-17
 Identities = 39/202 (19%), Positives = 67/202 (33%), Gaps = 49/202 (24%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLH-----QYSRLRIIHRDLKASNILLDSG-------- 64
           K   LD +   ++      GL +LH        +  I HRDLK+ NIL+           
Sbjct: 127 KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL 186

Query: 65  -------------------------YMPPE------YALRGFFSIKSDVFSFGVLMLEIL 93
                                    YMPPE              I +D++SFG+++ E+ 
Sbjct: 187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246

Query: 94  SGKKSTAV---YNTGSFNLLGH--AWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVAL 148
               S  +   Y     +L+    +++  ++    + + P       S   L +  K+  
Sbjct: 247 RRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMT 306

Query: 149 LCVQETVADRPTMSDVVSMISN 170
            C     A R T   V   ++ 
Sbjct: 307 ECWAHNPASRLTALRVKKTLAK 328

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 76.2 bits (188), Expect = 9e-17
 Identities = 36/202 (17%), Positives = 67/202 (33%), Gaps = 49/202 (24%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLH-----QYSRLRIIHRDLKASNILLDSG-------- 64
           +   LD     RI+  IA GL +LH        +  I HRDLK+ NIL+           
Sbjct: 98  QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL 157

Query: 65  -------------------------YMPPE------YALRGFFSIKSDVFSFGVLMLEIL 93
                                    YM PE               + D+++FG+++ E+ 
Sbjct: 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217

Query: 94  SGKKSTAVYNTGS---FNLLGH--AWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVAL 148
               S  +        ++++ +  +++  +     +   P I     S   L    K+  
Sbjct: 218 RRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMK 277

Query: 149 LCVQETVADRPTMSDVVSMISN 170
            C  +  + R T   +   ++ 
Sbjct: 278 ECWYQNPSARLTALRIKKTLTK 299

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 76.2 bits (188), Expect = 9e-17
 Identities = 39/195 (20%), Positives = 69/195 (35%), Gaps = 56/195 (28%)

Query: 14  ANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY-------- 65
             I+ K+ L + V       I +G+ YL      + +HRDL A N+L++S +        
Sbjct: 121 NKINLKQQLKYAV------QICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFG 171

Query: 66  ------------------------MPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAV 101
                                     PE  ++  F I SDV+SFGV + E+L+   S + 
Sbjct: 172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSS 231

Query: 102 YNTGSFNLLGHAWDLWKDDRVHELID-------PVITQDEISLSMLMRYVKVALLCVQET 154
                  ++G         R+   +        P    DE+    LM        C +  
Sbjct: 232 PMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEV--YQLM------RKCWEFQ 283

Query: 155 VADRPTMSDVVSMIS 169
            ++R +  +++    
Sbjct: 284 PSNRTSFQNLIEGFE 298

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 75.1 bits (185), Expect = 2e-16
 Identities = 46/195 (23%), Positives = 71/195 (36%), Gaps = 56/195 (28%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------- 65
           +I   +LL +       + I +G+ YLH       IHRDL A N+LLD+           
Sbjct: 130 SIGLAQLLLF------AQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGL 180

Query: 66  -----------------------MPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVY 102
                                    PE      F   SDV+SFGV + E+L+   S+   
Sbjct: 181 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 240

Query: 103 NTGSFNLLGHAWDLWKDDRVHELID-------PVITQDEISLSMLMRYVKVALLCVQETV 155
            T    L+G A       R+ EL++       P     E  +  LM        C +   
Sbjct: 241 PTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAE--VYHLM------KNCWETEA 292

Query: 156 ADRPTMSDVVSMISN 170
           + RPT  +++ ++  
Sbjct: 293 SFRPTFENLIPILKT 307

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 73.3 bits (180), Expect = 1e-15
 Identities = 35/203 (17%), Positives = 63/203 (31%), Gaps = 51/203 (25%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQ-----YSRLRIIHRDLKASNILLDSG-------- 64
            +  +  +   ++    A GL +LH        +  I HRDLK+ NIL+           
Sbjct: 132 NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 191

Query: 65  -------------------------YMPPEYALRGF-------FSIKSDVFSFGVLMLEI 92
                                    YM PE  L             ++D+++ G++  EI
Sbjct: 192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 250

Query: 93  LSGKKSTAV---YNTGSFNLLGH--AWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA 147
                   +   Y    ++L+    + +  +     + + P I     S   L    K+ 
Sbjct: 251 ARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 310

Query: 148 LLCVQETVADRPTMSDVVSMISN 170
             C     A R T   +   +S 
Sbjct: 311 RECWYANGAARLTALRIKKTLSQ 333

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 72.3 bits (178), Expect = 4e-15
 Identities = 36/193 (18%), Positives = 60/193 (31%), Gaps = 65/193 (33%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY----------- 65
            +   L  +   +++   A G+ YL        IHRDL A N L+               
Sbjct: 205 TEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSR 261

Query: 66  --------------------MPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTG 105
                                 PE    G +S +SDV+SFG+L+ E  S           
Sbjct: 262 EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS----------- 310

Query: 106 SFNLLGHA-WDLWKDDRVHELID-------PVITQDEISLSMLMRYVKVALLCVQETVAD 157
               LG + +    + +  E ++       P +  D +   M          C       
Sbjct: 311 ----LGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQ--------CWAYEPGQ 358

Query: 158 RPTMSDVVSMISN 170
           RP+ S +   + +
Sbjct: 359 RPSFSTIYQELQS 371

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 71.6 bits (176), Expect = 6e-15
 Identities = 48/219 (21%), Positives = 78/219 (35%), Gaps = 67/219 (30%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY------------------------ 65
           ++ GIA G+ YL   S +  +HRDL A NIL++S                          
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208

Query: 66  --------MPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHA-WDL 116
                     PE      F+  SDV+S+G+++ E++S                G   +  
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS---------------YGERPYWE 253

Query: 117 WKDDRVHELID-------PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS 169
             +  V + +D       P+       L  LM      L C Q+   +RP    +VS++ 
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAA--LYQLM------LDCWQKDRNNRPKFEQIVSILD 305

Query: 170 NEHLNLCSLKKLAFVRSKNVKN-SSHSNSGTSEFCSVND 207
               N  SLK +    ++        SN   + F +  D
Sbjct: 306 KLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGD 344

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 70.3 bits (173), Expect = 1e-14
 Identities = 39/195 (20%), Positives = 68/195 (34%), Gaps = 71/195 (36%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------- 65
           NI  + LL+W V       IA+G+ YL      R++HRDL A N+L+ +           
Sbjct: 113 NIGSQYLLNWCV------QIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGL 163

Query: 66  ----------------------MPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
                                 M  E  L   ++ +SDV+S+GV + E+++         
Sbjct: 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT--------- 214

Query: 104 TGSFNLLGHA-WDLWKDDRVHELID-------PVITQDEISLSMLMRYVKVALLCVQETV 155
                  G   +D      +  +++       P I   +  + M+M        C     
Sbjct: 215 ------FGSKPYDGIPASEISSILEKGERLPQPPICTID--VYMIM------RKCWMIDA 260

Query: 156 ADRPTMSDVVSMISN 170
             RP   +++   S 
Sbjct: 261 DSRPKFRELIIEFSK 275

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 69.2 bits (170), Expect = 2e-14
 Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 29/88 (32%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------------------------M 66
            + + + YL        +HRDL A N+L+                               
Sbjct: 125 DVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT 181

Query: 67  PPEYALRGFFSIKSDVFSFGVLMLEILS 94
            PE      FS KSDV+SFG+L+ EI S
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYS 209

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 69.7 bits (171), Expect = 2e-14
 Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 33/116 (28%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----- 64
           L          L + QV   + +     L +LH      ++H D+K +NI L        
Sbjct: 143 LQQHCEAWGASLPEAQVWGYLRD-TLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKL 198

Query: 65  -----------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK 97
                                  YM PE  L+G +   +DVFS G+ +LE+    +
Sbjct: 199 GDFGLLVELGTAGAGEVQEGDPRYMAPE-LLQGSYGTAADVFSLGLTILEVACNME 253

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 69.3 bits (170), Expect = 4e-14
 Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 29/88 (32%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------------------------M 66
            + + + YL        +HRDL A N+L+                               
Sbjct: 297 DVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT 353

Query: 67  PPEYALRGFFSIKSDVFSFGVLMLEILS 94
            PE      FS KSDV+SFG+L+ EI S
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYS 381

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 68.9 bits (169), Expect = 4e-14
 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 40/111 (36%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------- 65
            +  + LL+W V       IA+G+ YL       ++HR+L A N+LL S           
Sbjct: 111 ALGPQLLLNWGV------QIAKGMYYL---EEHGMVHRNLAARNVLLKSPSQVQVADFGV 161

Query: 66  ----------------------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                                 M  E    G ++ +SDV+S+GV + E+++
Sbjct: 162 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 68.7 bits (168), Expect = 6e-14
 Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 29/96 (30%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD------------SG----------- 64
            ++   + +GL YL    + +I+HRD+K SNIL++            SG           
Sbjct: 134 GKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 191

Query: 65  ----YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
               YM PE      +S++SD++S G+ ++E+  G+
Sbjct: 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 68.0 bits (167), Expect = 7e-14
 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 34/96 (35%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY------------------------ 65
           I   IA G++YL   +    +HRDL   N L+ +                          
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194

Query: 66  -------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                  MPPE  +   F+ +SDV+SFGV++ EI +
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 67.7 bits (166), Expect = 9e-14
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 34/120 (28%)

Query: 9   KLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD------ 62
           K           ++  ++  +I     + L +L     L+IIHRD+K SNILLD      
Sbjct: 109 KFYKYVYSVLDDVIPEEILGKITLATVKALNHLK--ENLKIIHRDIKPSNILLDRSGNIK 166

Query: 63  ------SG----------------YMPPE----YALRGFFSIKSDVFSFGVLMLEILSGK 96
                 SG                YM PE     A R  + ++SDV+S G+ + E+ +G+
Sbjct: 167 LCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 40/111 (36%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------- 65
           NI  + LL+W V       IA+G+ YL      R++HRDL A N+L+ +           
Sbjct: 113 NIGSQYLLNWCV------QIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGL 163

Query: 66  ----------------------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                                 M  E  L   ++ +SDV+S+GV + E+++
Sbjct: 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 66.8 bits (164), Expect = 1e-13
 Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 33/92 (35%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILL------------------DSGY--------- 65
            + +G+ +L      + IHRDL A N L+                  D  Y         
Sbjct: 112 DVCEGMAFL---ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP 168

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                PE      +S KSDV++FG+LM E+ S
Sbjct: 169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 67.2 bits (165), Expect = 1e-13
 Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 70/194 (36%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------- 65
           ++    L+ +         I + + YL     +  +HRD+   NIL+ S           
Sbjct: 109 SLKVLTLVLY------SLQICKAMAYL---ESINCVHRDIAVRNILVASPECVKLGDFGL 159

Query: 66  ---------------------MPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNT 104
                                M PE      F+  SDV+ F V M EILS          
Sbjct: 160 SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS---------- 209

Query: 105 GSFNLLGHA-WDLWKDDRVHELID-------PVITQDEISLSMLMRYVKVALLCVQETVA 156
                 G   +   ++  V  +++       P +      L  LM        C     +
Sbjct: 210 -----FGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPV--LYTLM------TRCWDYDPS 256

Query: 157 DRPTMSDVVSMISN 170
           DRP  +++V  +S+
Sbjct: 257 DRPRFTELVCSLSD 270

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 67.2 bits (165), Expect = 1e-13
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 33/92 (35%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILL------------------DSGY--------- 65
            IA+G+ ++        IHRDL+A+NIL+                  D+ Y         
Sbjct: 117 QIAEGMAFI---EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 173

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                PE    G F+IKSDV+SFG+L+ EI++
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 67.2 bits (165), Expect = 1e-13
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 34/93 (36%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------------------------- 65
            IA G+ YL   S   ++H+DL   N+L+                               
Sbjct: 136 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192

Query: 66  ----MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
               M PE  + G FSI SD++S+GV++ E+ S
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 67.4 bits (165), Expect = 1e-13
 Identities = 50/207 (24%), Positives = 76/207 (36%), Gaps = 69/207 (33%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------------------------- 65
           GIA G+ YL   + +  +HRDL A NIL++S                             
Sbjct: 155 GIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211

Query: 66  -----MPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHA--WDLWK 118
                  PE      F+  SDV+SFG++M E+++                G    W+   
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT---------------YGERPYWE-LS 255

Query: 119 DDRVHELID-------PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE 171
           +  V + I+       P+       +  LM      + C Q+  A RP  +D+VS++   
Sbjct: 256 NHEVMKAINDGFRLPTPMDCPSA--IYQLM------MQCWQQERARRPKFADIVSILDKL 307

Query: 172 HLNLCSLKKLAFVRSKNVKNSSHSNSG 198
                SLK LA    + V     S SG
Sbjct: 308 IRAPDSLKTLADFDPR-VSIRLPSTSG 333

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 34/96 (35%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY------------------------ 65
           +   +A G++YL   + L  +HRDL   N L+  G                         
Sbjct: 163 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 219

Query: 66  -------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                  MPPE  L   F+ +SDV+SFGV++ EI +
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 26/112 (23%), Positives = 37/112 (33%), Gaps = 41/112 (36%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------- 65
           +     L  + V       +A+G+ YL      R IHRDL A N+LL +           
Sbjct: 117 HFLLGTLSRYAV------QVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGL 167

Query: 66  -----------------------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                                    PE      FS  SD + FGV + E+ +
Sbjct: 168 MRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 33/92 (35%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILL------------------DSGY--------- 65
            + + + YL      + +HRDL A N L+                  D  Y         
Sbjct: 128 DVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 184

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
               PPE  +   FS KSD+++FGVLM EI S
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           IA G+ YL   S    +HRDL A N +L                                
Sbjct: 156 IALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              +  E      ++ KSDV++FGV M EI +
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 36/94 (38%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           +A+G+ YL   +  + +HRDL A N +LD  +                            
Sbjct: 133 VARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR 189

Query: 66  -----MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                   E      F+ KSDV+SFGVL+ E+L+
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 35/97 (36%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY------------------------ 65
           ++ G+  G+ YL   S L  +HRDL A N+L+DS                          
Sbjct: 156 MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTT 212

Query: 66  --------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                     PE      FS  SDV+SFGV+M E+L+
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 29/117 (24%), Positives = 43/117 (36%), Gaps = 41/117 (35%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---- 65
           L    ++  K +++       +  ++ G+ YL        +HRDL A N+LL + +    
Sbjct: 108 LQQNRHVKDKNIIEL------VHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKI 158

Query: 66  ----------------------------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                                         PE      FS KSDV+SFGVLM E  S
Sbjct: 159 SDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 66.5 bits (163), Expect = 2e-13
 Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 39/110 (35%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL------------- 61
           ++D   L+ +         ++  L YL      R +HRD+ A N+L+             
Sbjct: 112 SLDLASLILY------AYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGL 162

Query: 62  -----DSGY------------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                DS Y            M PE      F+  SDV+ FGV M EIL 
Sbjct: 163 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 212

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 66.1 bits (162), Expect = 2e-13
 Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 33/92 (35%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------------------------- 65
            + +G+ YL       +IHRDL A N L+                               
Sbjct: 112 DVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 168

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                PE      +S KSDV+SFGVLM E+ S
Sbjct: 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 66.6 bits (163), Expect = 2e-13
 Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           IA G+ YL   S    IHRDL A N +L                                
Sbjct: 146 IACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLP 202

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              +  E      +++ SDV++FGV M EI++
Sbjct: 203 VKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 66.1 bits (162), Expect = 2e-13
 Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 33/92 (35%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------------------------- 65
            I+  + YL    +   IHRDL A N L+   +                           
Sbjct: 119 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                PE      FSIKSDV++FGVL+ EI +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 66.5 bits (163), Expect = 3e-13
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           IA G+ YL   +  + +HRDL A N ++   +                            
Sbjct: 147 IADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M PE    G F+  SDV+SFGV++ EI +
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 66.5 bits (163), Expect = 3e-13
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           +AQG+ +L   +    IHRD+ A N+LL +G+                            
Sbjct: 173 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M PE      ++++SDV+S+G+L+ EI S
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 66.1 bits (162), Expect = 3e-13
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 34/101 (33%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD------------SG----------- 64
            +I   I + L +LH  S+L +IHRD+K SN+L++            SG           
Sbjct: 112 GKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID 169

Query: 65  -----YMPPE----YALRGFFSIKSDVFSFGVLMLEILSGK 96
                YM PE       +  +S+KSD++S G+ M+E+   +
Sbjct: 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 66.6 bits (163), Expect = 3e-13
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 33/92 (35%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------------------------- 65
            IA+G+ ++    +   IHRDL+A+NIL+ +                             
Sbjct: 292 QIAEGMAFI---EQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 348

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                PE    G F+IKSDV+SFG+L++EI++
Sbjct: 349 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 66.2 bits (162), Expect = 4e-13
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           +A+G+ YL   +  + IHRDL A N+L+                                
Sbjct: 166 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M PE      ++ +SDV+SFGVLM EI +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 66.1 bits (162), Expect = 4e-13
 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 31/90 (34%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------------------------- 65
            +A+G+ YL   S+ + IHRDL A NIL+   Y                           
Sbjct: 150 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR 206

Query: 66  -MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
            M  E      ++  SDV+S+GVL+ EI+S
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 65.7 bits (161), Expect = 4e-13
 Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           +A+G+ +L   +    IHRDL A NILL  G                             
Sbjct: 154 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M PE      ++ +SDV+S+G+ + E+ S
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 65.3 bits (160), Expect = 5e-13
 Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 41/112 (36%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------- 65
            I    + +       +  ++ G+ YL        +HRDL A N+LL + +         
Sbjct: 106 EIPVSNVAEL------LHQVSMGMKYL---EEKNFVHRDLAARNVLLVNRHYAKISDFGL 156

Query: 66  -----------------------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                                    PE      FS +SDV+S+GV M E LS
Sbjct: 157 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 65.8 bits (161), Expect = 5e-13
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           +A+G+ +L   +  + IHRDL A NILL                                
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 213

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M PE      ++I+SDV+SFGVL+ EI S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 65.8 bits (161), Expect = 6e-13
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           +A+G+ YL   +  + IHRDL A N+L+                                
Sbjct: 212 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 268

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M PE      ++ +SDV+SFGVLM EI +
Sbjct: 269 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 66.0 bits (161), Expect = 7e-13
 Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 28/99 (28%)

Query: 22  LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------ 63
           L        +  I   L YLH    + +++ DLK  NI+L                    
Sbjct: 179 LPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFG 235

Query: 64  ------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                 G+  PE   R   ++ +D+++ G  +  +    
Sbjct: 236 YLYGTPGFQAPEIV-RTGPTVATDIYTVGRTLAALTLDL 273

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 65.3 bits (160), Expect = 7e-13
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           I+QG+ YL   + ++++HRDL A NIL+  G                             
Sbjct: 159 ISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIP 215

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M  E      ++ +SDV+SFGVL+ EI++
Sbjct: 216 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 65.4 bits (160), Expect = 8e-13
 Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           +A G+ YL   S  + +HRDL   N L+                                
Sbjct: 183 VAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIP 239

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              MPPE      ++ +SDV+++GV++ EI S
Sbjct: 240 IRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 65.7 bits (160), Expect = 8e-13
 Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 35/110 (31%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL--------------- 61
            K+  +     A ++  ++ G+ YL        +HR+L A N+LL               
Sbjct: 428 GKREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRNLAARNVLLVNRHYAKISDFGLSK 484

Query: 62  -----DSGY------------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                DS Y              PE      FS +SDV+S+GV M E LS
Sbjct: 485 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 65.0 bits (159), Expect = 9e-13
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 36/95 (37%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------------------------- 65
            +A+G+ YL   +  + +HRDL A N +LD  +                           
Sbjct: 136 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 192

Query: 66  ------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                 M  E      F+ KSDV+SFGVL+ E+++
Sbjct: 193 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 37/95 (38%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILL---------------------DSGY------- 65
           IA G  YL        IHRD+ A N LL                      + Y       
Sbjct: 149 IACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205

Query: 66  ------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                 MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 206 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 65.1 bits (158), Expect = 1e-12
 Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 38/119 (31%)

Query: 13  AANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD---------- 62
            ++    + L    R ++   + + L  LH      ++H  L+  +I+LD          
Sbjct: 199 LSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGF 255

Query: 63  ---------------SGYMPPEY----------ALRGFFSIKSDVFSFGVLMLEILSGK 96
                           G+ PPE                 +   D ++ G+ +  I    
Sbjct: 256 EHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD 314

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 64.6 bits (158), Expect = 1e-12
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           +A+G+ +L        +HRDL A N+L+  G                             
Sbjct: 181 VAKGMEFL---EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP 237

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M PE    G ++IKSDV+S+G+L+ EI S
Sbjct: 238 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 64.8 bits (158), Expect = 1e-12
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 36/95 (37%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------------------------- 65
            +A+G+ +L   +  + +HRDL A N +LD  +                           
Sbjct: 200 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 256

Query: 66  ------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                 M  E      F+ KSDV+SFGVL+ E+++
Sbjct: 257 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           +A+G+ YL   +  + IHRDL A N+L+                                
Sbjct: 200 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 256

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M PE      ++ +SDV+SFGVL+ EI +
Sbjct: 257 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 35/102 (34%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD------------SG----------- 64
            ++   I + L YL    +  +IHRD+K SNILLD            SG           
Sbjct: 127 GKMTVAIVKALYYLK--EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS 184

Query: 65  -----YMPPE-----YALRGFFSIKSDVFSFGVLMLEILSGK 96
                YM PE        +  + I++DV+S G+ ++E+ +G+
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 64.5 bits (157), Expect = 2e-12
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 33/92 (35%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------------------------- 65
            IA G+ Y+    R+  +HRDL+A+NIL+                               
Sbjct: 371 QIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 427

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 64.5 bits (157), Expect = 2e-12
 Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 39/109 (35%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL-------------- 61
           +D   L+ +         ++  L YL      R +HRD+ A N+L+              
Sbjct: 488 LDLASLILY------AYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538

Query: 62  ----DSGY------------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
               DS Y            M PE      F+  SDV+ FGV M EIL 
Sbjct: 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 64.0 bits (156), Expect = 3e-12
 Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 37/99 (37%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------------------DSGY--- 65
           +   IA G  YL        IHRD+ A N LL                      +GY   
Sbjct: 186 VARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK 242

Query: 66  ----------MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                     MPPE  + G F+ K+D +SFGVL+ EI S
Sbjct: 243 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 64.0 bits (156), Expect = 3e-12
 Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 33/92 (35%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILL------------------DSGY--------- 65
            I+  + YL    +   IHR+L A N L+                     Y         
Sbjct: 326 QISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 382

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                PE      FSIKSDV++FGVL+ EI +
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 62.7 bits (153), Expect = 5e-12
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 30/109 (27%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
           + + +++  +V       I +GL +LH      IIHRDLK  NI +              
Sbjct: 120 LKRFKVMKIKVLRSWCRQILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178

Query: 65  -----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                            +M PE      +    DV++FG+ MLE+ + +
Sbjct: 179 ATLKRASFAKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATSE 226

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 62.9 bits (153), Expect = 6e-12
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 33/92 (35%)

Query: 33  GIAQGLLYLHQYSRLRIIHRDLKASNILLDSGY--------------------------- 65
            IA G+ Y+    R+  +HRDL+A+NIL+                               
Sbjct: 288 QIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                PE AL G F+IKSDV+SFG+L+ E+ +
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 62.7 bits (152), Expect = 6e-12
 Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 39/117 (33%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
               + L    R ++   + + L  LH Y    ++H  L+  +I+LD             
Sbjct: 197 SSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLRPVDIVLDQRGGVFLTGFEHL 253

Query: 64  -------------GYMPPEYAL-----------RGFFSIKSDVFSFGVLMLEILSGK 96
                        G+ PPE              R   +   D ++ G+++  I    
Sbjct: 254 VRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 61.5 bits (150), Expect = 1e-11
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 33/111 (29%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
           I+    L           I  G+ + H    +RI+HRD+K  NIL+DS            
Sbjct: 102 IESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIA 158

Query: 65  -------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                              Y  PE A        +D++S G+++ E+L G+
Sbjct: 159 KALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 61.6 bits (150), Expect = 1e-11
 Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 33/108 (30%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------- 64
           +K L + + R   +  I  G  YLH+    R+IHRDLK  N+ L+               
Sbjct: 135 RKALTEPEAR-YYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 190

Query: 65  ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                           Y+ PE   +   S + DV+S G +M  +L GK
Sbjct: 191 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 61.2 bits (149), Expect = 1e-11
 Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 43/113 (38%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL-------------- 61
           I+    L+        + +A  + +L       +IH ++ A NILL              
Sbjct: 110 INILWKLEV------AKQLAAAMHFL---EENTLIHGNVCAKNILLIREEDRKTGNPPFI 160

Query: 62  ------------DSGY-------MPPEYAL-RGFFSIKSDVFSFGVLMLEILS 94
                                  +PPE        ++ +D +SFG  + EI S
Sbjct: 161 KLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 44/122 (36%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
           + KK+ +D   R    + + + +  +HQ+    I+H DLK +N L+  G           
Sbjct: 118 LKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLIDFGIAN 174

Query: 65  -------------------YMPPE-----------YALRGFFSIKSDVFSFGVLMLEILS 94
                              YMPPE              +   S KSDV+S G ++  +  
Sbjct: 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234

Query: 95  GK 96
           GK
Sbjct: 235 GK 236

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 61.4 bits (149), Expect = 2e-11
 Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 44/122 (36%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
           + KK+ +D   R    + + + +  +HQ+    I+H DLK +N L+  G           
Sbjct: 146 LKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLIDFGIAN 202

Query: 65  -------------------YMPPE-----------YALRGFFSIKSDVFSFGVLMLEILS 94
                              YMPPE              +   S KSDV+S G ++  +  
Sbjct: 203 QMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262

Query: 95  GK 96
           GK
Sbjct: 263 GK 264

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 60.9 bits (148), Expect = 3e-11
 Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 44/122 (36%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
           + KK+ +D   R    + + + +  +HQ+    I+H DLK +N L+  G           
Sbjct: 99  LKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLIDFGIAN 155

Query: 65  -------------------YMPPE-----------YALRGFFSIKSDVFSFGVLMLEILS 94
                              YMPPE              +   S KSDV+S G ++  +  
Sbjct: 156 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 215

Query: 95  GK 96
           GK
Sbjct: 216 GK 217

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 60.3 bits (147), Expect = 3e-11
 Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 33/108 (30%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------- 64
           +K L + + R   +  I  G  YLH   R R+IHRDLK  N+ L+               
Sbjct: 109 RKALTEPEAR-YYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 164

Query: 65  ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                           Y+ PE   +   S + DV+S G +M  +L GK
Sbjct: 165 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 59.6 bits (145), Expect = 5e-11
 Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 31/97 (31%)

Query: 29  RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------------------ 64
            + E I +G+ Y+H     ++I+RDLK SNI L                           
Sbjct: 126 ELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK 182

Query: 65  ----YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK 97
               YM PE      +  + D+++ G+++ E+L    
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD 219

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 60.0 bits (146), Expect = 5e-11
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 35/113 (30%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
           +  +  +  +    +I    Q L + H   +  IIHRD+K +NI++ +            
Sbjct: 107 VHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIA 163

Query: 65  ---------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                Y+ PE A       +SDV+S G ++ E+L+G+
Sbjct: 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 59.7 bits (144), Expect = 7e-11
 Identities = 8/109 (7%), Positives = 23/109 (21%), Gaps = 31/109 (28%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
              +          +   + +    L       ++H      N+ +              
Sbjct: 185 YVFRGDEGILALHILTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLGDVSAL 241

Query: 65  ---------------YMPPEYALRG--FFSIKSDVFSFGVLMLEILSGK 96
                          Y P E+       F+   + +  G+ +  +    
Sbjct: 242 WKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 59.1 bits (144), Expect = 9e-11
 Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 33/108 (30%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------- 64
            K   + + R   +  I  G+LYLH +    I+HRDL  SN+LL                
Sbjct: 106 VKPFSENEAR-HFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQ 161

Query: 65  ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                           Y+ PE A R    ++SDV+S G +   +L G+
Sbjct: 162 LKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 58.8 bits (142), Expect = 2e-10
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 34/92 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGY---------------------------- 65
           +A+G+ +L   +  + IHRDL A NILL                                
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258

Query: 66  ---MPPEYALRGFFSIKSDVFSFGVLMLEILS 94
              M PE      ++I+SDV+SFGVL+ EI S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 57.6 bits (140), Expect = 3e-10
 Identities = 19/99 (19%), Positives = 32/99 (32%), Gaps = 33/99 (33%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------- 64
             I+  I   L   H        HRD+K  NIL+ +                        
Sbjct: 137 VAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLG 193

Query: 65  -------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                  YM PE       + ++D+++   ++ E L+G 
Sbjct: 194 NTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS 232

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 57.2 bits (139), Expect = 4e-10
 Identities = 33/108 (30%), Positives = 41/108 (37%), Gaps = 30/108 (27%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
           + K    D Q  A  I  +A  L Y H     R+IHRD+K  N+LL S            
Sbjct: 100 LQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 156

Query: 65  ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                           Y+PPE         K D++S GVL  E L GK
Sbjct: 157 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 56.7 bits (137), Expect = 7e-10
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 44/121 (36%)

Query: 16  IDKKRLLDWQVRAR-IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------- 63
           +++K      +    +++    GL +LH    L I+HRDLK  NIL+             
Sbjct: 108 VEQKDFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMI 164

Query: 64  --------------------------GYMPPEY---ALRGFFSIKSDVFSFGVLMLEILS 94
                                     G++ PE      +   +   D+FS G +   ++S
Sbjct: 165 SDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224

Query: 95  G 95
            
Sbjct: 225 E 225

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 56.4 bits (136), Expect = 9e-10
 Identities = 25/110 (22%), Positives = 36/110 (32%), Gaps = 44/110 (40%)

Query: 29  RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------------------ 64
            I   IA+ + +LH      ++HRDLK SNI                             
Sbjct: 168 HIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224

Query: 65  -----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK 97
                            YM PE      +S K D+FS G+++ E+L    
Sbjct: 225 TPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS 274

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 56.3 bits (136), Expect = 1e-09
 Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 33/110 (30%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------ 64
           +    +  QV   II+ +     Y+H  +   I HRD+K SNIL+D              
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESE 200

Query: 65  ---------------YMPPEYALRG---FFSIKSDVFSFGVLMLEILSGK 96
                          +MPPE        +   K D++S G+ +  +    
Sbjct: 201 YMVDKKIKGSRGTYEFMPPE-FFSNESSYNGAKVDIWSLGICLYVMFYNV 249

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           +   L ++H     R++HRD+K +N+ + +                              
Sbjct: 145 LCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 201

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           YM PE      ++ KSD++S G L+ E+ + +
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 233

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 30/108 (27%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------- 64
           + K    D Q  A  +E +A  L Y H     ++IHRD+K  N+L+              
Sbjct: 105 LQKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS 161

Query: 65  ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                           Y+PPE         K D++  GVL  E L G 
Sbjct: 162 VHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 54.8 bits (132), Expect = 3e-09
 Identities = 10/78 (12%), Positives = 22/78 (28%), Gaps = 19/78 (24%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------GYMPPEYALRGFFSI 78
            R ++ +A      H   R  +       S + +             MP         + 
Sbjct: 132 IRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATMPDA-------NP 181

Query: 79  KSDVFSFGVLMLEILSGK 96
           + D+   G  +  +L  +
Sbjct: 182 QDDIRGIGASLYALLVNR 199

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 54.6 bits (132), Expect = 3e-09
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 31/94 (32%)

Query: 34  IAQGLLYLHQ--YSRLRIIHRDLKASNILLDSG--------------------------- 64
           +   L   H+       ++HRDLK +N+ LD                             
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGT 179

Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
             YM PE   R  ++ KSD++S G L+ E+ +  
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 54.9 bits (132), Expect = 4e-09
 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 31/91 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------------------GYM 66
           I  GL ++H      +++RDLK +NILLD                            GYM
Sbjct: 301 IILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 357

Query: 67  PPEYALRGFFSIKS-DVFSFGVLMLEILSGK 96
            PE   +G     S D FS G ++ ++L G 
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 54.3 bits (131), Expect = 4e-09
 Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           I   L ++H     +I+HRD+K+ NI L                                
Sbjct: 134 ICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPY 190

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           Y+ PE      ++ KSD+++ G ++ E+ + K
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLK 222

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 53.9 bits (130), Expect = 6e-09
 Identities = 26/117 (22%), Positives = 38/117 (32%), Gaps = 44/117 (37%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------- 64
                +  V   I   IA+ + +LH      ++HRDLK SNI                  
Sbjct: 111 TIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTA 167

Query: 65  ----------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEIL 93
                                       YM PE      +S K D+FS G+++ E+L
Sbjct: 168 MDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 53.1 bits (128), Expect = 9e-09
 Identities = 15/109 (13%), Positives = 35/109 (32%), Gaps = 50/109 (45%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           + +GL Y+H    + ++H D+K SNI +                                
Sbjct: 124 VGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH 180

Query: 65  ---------------YMPPEYALRGFFS--IKSDVFSFGVLMLEILSGK 96
                          ++  E  L+  ++   K+D+F+  + ++     +
Sbjct: 181 VTRISSPQVEEGDSRFLANE-VLQENYTHLPKADIFALALTVVCAAGAE 228

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 35/99 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           ARII  +  G+ Y+H+    +I+HRDLK  N+LL+S                        
Sbjct: 129 ARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                   Y+ PE  L G +  K DV+S GV++  +LSG
Sbjct: 186 KDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 37/96 (38%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           I +GL YLH     +I+HRD+K  N+L+++                              
Sbjct: 131 ILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTL 187

Query: 65  -YMPPE---YALRGFFSIKSDVFSFGVLMLEILSGK 96
            YM PE      RG +   +D++S G  ++E+ +GK
Sbjct: 188 QYMAPEIIDKGPRG-YGKAADIWSLGCTIIEMATGK 222

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 35/99 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           A I++ I  G+ YLH+     I+HRD+K  NILL++                        
Sbjct: 149 ANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                   Y+ PE  L+  ++ K DV+S GV+M  +L G
Sbjct: 206 RDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 35/100 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           A II+ +  G+ YLH+     I+HRDLK  N+LL+S                        
Sbjct: 139 AVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM 195

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                   Y+ PE  LR  +  K DV+S GV++  +L+G 
Sbjct: 196 KERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGY 234

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 52.4 bits (126), Expect = 2e-08
 Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 38/98 (38%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
             +GL YLH     RI+H D+KA N+LL S                              
Sbjct: 159 ALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215

Query: 65  ------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                 +M PE  +      K D++S   +ML +L+G 
Sbjct: 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 31/91 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------------------GY 65
           I  GL  LH   R RI++RDLK  NILLD                             GY
Sbjct: 295 ICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGY 351

Query: 66  MPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           M PE      ++   D ++ G L+ E+++G+
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 23/124 (18%), Positives = 37/124 (29%), Gaps = 47/124 (37%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
             +          R+   I + L Y+H      IIHRDLK  NI +D             
Sbjct: 107 HSENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLA 163

Query: 64  -------------------------------GYMPPE-YALRGFFSIKSDVFSFGVLMLE 91
                                           Y+  E     G ++ K D++S G++  E
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223

Query: 92  ILSG 95
           ++  
Sbjct: 224 MIYP 227

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 33/116 (28%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----- 64
           + D   +  K L + ++ A I++   +GL YLH    +R IHRD+KA NILL++      
Sbjct: 111 VSDIIRLRNKTLTEDEI-ATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKL 166

Query: 65  ------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                   +M PE      ++  +D++S G+  +E+  GK
Sbjct: 167 ADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 52.5 bits (126), Expect = 3e-08
 Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------------------G 64
           I  GL +LHQ     II+RDLK  N+LLD                              G
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           +M PE  L   +    D F+ GV + E+++ +
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 51.6 bits (124), Expect = 3e-08
 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 32/108 (29%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------------- 64
           +   LD    A I+  I +GL YLH     + IHRD+KA+N+LL                
Sbjct: 112 EPGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ 168

Query: 65  ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                           +M PE   +  +  K+D++S G+  +E+  G+
Sbjct: 169 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 51.6 bits (123), Expect = 5e-08
 Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 34/94 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------------ 63
           I+  L YLH+    RIIHRDLK  NI+L                                
Sbjct: 130 ISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT 186

Query: 64  -GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
             Y+ PE   +  +++  D +SFG L  E ++G 
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF 220

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 51.2 bits (123), Expect = 6e-08
 Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 35/99 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           ARII+ +  G+ Y+H+     I+HRDLK  NILL+S                        
Sbjct: 124 ARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM 180

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                   Y+ PE  LRG +  K DV+S GV++  +LSG
Sbjct: 181 KDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 50.4 bits (121), Expect = 9e-08
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 32/98 (32%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSGY------------- 65
           A + E + Q L YLH      +IHRD+K+ +ILL         D G+             
Sbjct: 144 ATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 200

Query: 66  -------MPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                  M PE   R  ++ + D++S G++++E++ G+
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 51/132 (38%)

Query: 9   KLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---- 64
             ++        L + Q+   ++ GI +GL  +H        HRDLK +NILL       
Sbjct: 119 NEIERLKDKGNFLTEDQIL-WLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPV 174

Query: 65  ----------------------------------YMPPE------YALRGFFSIKSDVFS 84
                                             Y  PE      + +      ++DV+S
Sbjct: 175 LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDE---RTDVWS 231

Query: 85  FGVLMLEILSGK 96
            G ++  ++ G+
Sbjct: 232 LGCVLYAMMFGE 243

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 32/98 (32%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---------DSGY------------- 65
           A +     Q L +LH     ++IHRD+K+ NILL         D G+             
Sbjct: 119 AAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175

Query: 66  -------MPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                  M PE   R  +  K D++S G++ +E++ G+
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           + D     K   L  +  A I   I +GL +LHQ    ++IHRD+K  N+LL  
Sbjct: 114 VTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTE 164

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 48.5 bits (116), Expect = 4e-07
 Identities = 27/94 (28%), Positives = 33/94 (35%), Gaps = 34/94 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------------------GY 65
           +   L YL      RIIHRD+K  NILLD                              Y
Sbjct: 124 LVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPY 180

Query: 66  MPPEYALRGFFSIKS---DVFSFGVLMLEILSGK 96
           M PE       +  S   D +S GV   E+L G+
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 48.4 bits (115), Expect = 5e-07
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           A I++G+ + L Y+H    +  +HR +KAS+IL+  
Sbjct: 131 AYILQGVLKALDYIH---HMGYVHRSVKASHILISV 163

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 48.2 bits (115), Expect = 5e-07
 Identities = 33/154 (21%), Positives = 48/154 (31%), Gaps = 66/154 (42%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
             ++  IA G+ +LH    L+IIHRDLK  NIL+ +                        
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174

Query: 64  ----------------------GYMPPEYALRGFFSI--------KSDVFSFGVLMLEIL 93
                                 G+  PE  L    ++          D+FS G +   IL
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPEL-LEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233

Query: 94  S------GKKSTAVYN--TGSFNLLGHAWDLWKD 119
           S      G K +   N   G F+L        + 
Sbjct: 234 SKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRS 267

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 48.1 bits (115), Expect = 5e-07
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           +        + L + Q+   +   + + L +LH     RIIHRDLKA N+L+  
Sbjct: 103 VDAIMLELDRGLTEPQI-QVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTL 152

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 48.2 bits (115), Expect = 6e-07
 Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 32/115 (27%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----- 64
             D   + KK L + ++ A +  G  QGL YLH      +IHRD+KA NILL        
Sbjct: 140 ASDLLEVHKKPLQEVEI-AAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKL 195

Query: 65  --------------------YMPPE---YALRGFFSIKSDVFSFGVLMLEILSGK 96
                               +M PE       G +  K DV+S G+  +E+   K
Sbjct: 196 GDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 47.6 bits (114), Expect = 7e-07
 Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 35/99 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           A +++ +   L Y H      ++H+DLK  NIL                           
Sbjct: 127 AELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS 183

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                   YM PE   +   + K D++S GV+M  +L+G
Sbjct: 184 TNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 47.5 bits (113), Expect = 8e-07
 Identities = 24/107 (22%), Positives = 34/107 (31%), Gaps = 42/107 (39%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           + I+  I   L YLH      I HRD+K  N L  +                        
Sbjct: 171 SNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE 227

Query: 64  -----------GYMPPEYALRGF---FSIKSDVFSFGVLMLEILSGK 96
                       ++ PE  L      +  K D +S GVL+  +L G 
Sbjct: 228 YYGMTTKAGTPYFVAPE-VLNTTNESYGPKCDAWSAGVLLHLLLMGA 273

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 47.3 bits (113), Expect = 9e-07
 Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 43/117 (36%)

Query: 16  IDKKRLLDWQVRA---RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------- 64
           + +KR    Q      ++I+G+     YLH      I+H+D+K  N+LL +G        
Sbjct: 101 VPEKRFPVCQAHGYFCQLIDGLE----YLH---SQGIVHKDIKPGNLLLTTGGTLKISAL 153

Query: 65  -----------------------YMPPEYA--LRGFFSIKSDVFSFGVLMLEILSGK 96
                                  + PPE A  L  F   K D++S GV +  I +G 
Sbjct: 154 GVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 35/99 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           ARI++ +   + Y H+   L + HRDLK  N L  +                        
Sbjct: 109 ARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM 165

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                   Y+ P+  L G +  + D +S GV+M  +L G
Sbjct: 166 RTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 16/109 (14%), Positives = 33/109 (30%), Gaps = 43/109 (39%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------- 64
             ++  +  G+ +L +     I+HR++K  NI+   G                       
Sbjct: 115 LIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171

Query: 65  ---------YMPPE--------YALRGFFSIKSDVFSFGVLMLEILSGK 96
                    Y+ P+           +  +    D++S GV      +G 
Sbjct: 172 FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 33/98 (33%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
              ++ I +G+ ++HQ   + I+H DLK  NIL  +                        
Sbjct: 190 ILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK 246

Query: 64  ------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                  ++ PE     F S  +D++S GV+   +LSG
Sbjct: 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS-G---------------------------- 64
           +A  L +LH    L II+RDLK  NILLD  G                            
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 191

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           YM PE   R   +  +D +SFGVLM E+L+G 
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 223

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 47.2 bits (112), Expect = 1e-06
 Identities = 16/109 (14%), Positives = 33/109 (30%), Gaps = 43/109 (39%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------- 64
             ++  +  G+ +L +     I+HR++K  NI+   G                       
Sbjct: 115 LIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171

Query: 65  ---------YMPPE--------YALRGFFSIKSDVFSFGVLMLEILSGK 96
                    Y+ P+           +  +    D++S GV      +G 
Sbjct: 172 FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 23/98 (23%), Positives = 34/98 (34%), Gaps = 33/98 (33%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           A I+  I   + +LH      I HRD+K  N+L  S                        
Sbjct: 131 AEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 187

Query: 64  ------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                  Y+ PE      +    D++S GV+M  +L G
Sbjct: 188 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           A I+  + +GL YLH   +   IHRD+KA NILL  
Sbjct: 124 ATILREVLEGLEYLH---KNGQIHRDVKAGNILLGE 156

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------------------G--- 64
           IA  L YLH    L I++RDLK  NILLDS                          G   
Sbjct: 148 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPE 204

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           Y+ PE   +  +    D +  G ++ E+L G 
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 46.4 bits (111), Expect = 2e-06
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS-G---------------------------- 64
           I+  L +LHQ     II+RDLK  NI+L+  G                            
Sbjct: 130 ISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE 186

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           YM PE  +R   +   D +S G LM ++L+G 
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 35/99 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           ARII+ +  G+ Y+H+     I+HRDLK  NILL+S                        
Sbjct: 124 ARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM 180

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                   Y+ PE  LRG +  K DV+S GV++  +LSG
Sbjct: 181 KDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------------------G--- 64
           I+  L YLH+     II+RDLK  N+LLDS                          G   
Sbjct: 162 ISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPN 218

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           Y+ PE      +    D ++ GVLM E+++G+
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
            +  L    V  +I     + + ++H   +  IIHRDLK  N+LL +
Sbjct: 129 SRGPLSCDTVL-KIFYQTCRAVQHMH-RQKPPIIHRDLKVENLLLSN 173

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 35/100 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           + I+  +   + ++H    + ++HRDLK  N+L                           
Sbjct: 109 SYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165

Query: 64  --------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                    Y  PE   +  +    D++S GV++  +LSG
Sbjct: 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG 205

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 33/98 (33%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           + +I+ +   + YLH+     I+HRDLK  N+L  +                        
Sbjct: 109 SLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165

Query: 64  ------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                 GY+ PE   +  +S   D +S GV+   +L G
Sbjct: 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 33/98 (33%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
              +    +GL ++H+     I+H D+K  NI+ ++                        
Sbjct: 152 INYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208

Query: 64  ------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                  +  PE   R      +D+++ GVL   +LSG
Sbjct: 209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------------------G--- 64
           IA GL +L       II+RDLK  N++LDS                          G   
Sbjct: 130 IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPD 186

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           Y+ PE      +    D ++FGVL+ E+L+G+
Sbjct: 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------------------G--- 64
           I+  L YLH+     II+RDLK  N+LLDS                          G   
Sbjct: 119 ISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPN 175

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           Y+ PE      +    D ++ GVLM E+++G+
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 34/99 (34%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           + I++ I + + YLH    + I HRD+K  N+L  S                        
Sbjct: 164 SEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 220

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                   Y+ PE      +    D++S GV+M  +L G
Sbjct: 221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 31/92 (33%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           I   L YLH  S   +++RDLK  N++LD                               
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 314

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           Y+ PE      +    D +  GV+M E++ G+
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 45.7 bits (108), Expect = 3e-06
 Identities = 24/163 (14%), Positives = 43/163 (26%), Gaps = 48/163 (29%)

Query: 10  LLDAANIDKK---RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--- 63
           LL+A N+ K    +++   +       +   +  +H      IIH D+K  N +L +   
Sbjct: 154 LLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFL 210

Query: 64  ---------------------------------------GYMPPEYALRGFFSIKSDVFS 84
                                                  G+   E      ++ + D F 
Sbjct: 211 EQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFG 270

Query: 85  FGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID 127
               +  +L G         G     G    L   D  +E   
Sbjct: 271 VAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEFFH 313

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLD 62
           + + +  LH  S + + HRD+K  N+L++
Sbjct: 138 LIRSIGCLHLPS-VNVCHRDIKPHNVLVN 165

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 46.2 bits (109), Expect = 3e-06
 Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 33/100 (33%)

Query: 27  RARIIEG-IAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------------- 63
            A      IA GL +L       II+RDLK  N++LDS                      
Sbjct: 443 HAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT 499

Query: 64  ----G---YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
               G   Y+ PE      +    D ++FGVL+ E+L+G+
Sbjct: 500 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------------------G--- 64
           I   L YLH      +++RD+K  N++LD                           G   
Sbjct: 114 IVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
           Y+ PE      +    D +  GV+M E++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 44.9 bits (107), Expect = 6e-06
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 33/100 (33%)

Query: 27  RARIIEG-IAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------------- 63
           RAR     I   L++LH      II+RDLK  N+LLD                       
Sbjct: 125 RARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT 181

Query: 64  ----G---YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
               G   Y+ PE      +    D ++ GVL+ E+L G 
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 45.2 bits (107), Expect = 6e-06
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDS 63
            G+ YLH      ++HRDLK +NIL+  
Sbjct: 139 DGIHYLHAN---WVLHRDLKPANILVMG 163

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 45.0 bits (107), Expect = 6e-06
 Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 36/101 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           + ++  I + + YLH      ++HRDLK SNIL                           
Sbjct: 119 SAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175

Query: 64  ---------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                     ++ PE   R  +    D++S GVL+  +L+G
Sbjct: 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 44.9 bits (107), Expect = 6e-06
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 19/83 (22%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSGYMPPEYAL--------RGFFSIKSDVFSF 85
           +  G+ + H     R +HRDLK  N+LL          L        R  F I    F+ 
Sbjct: 141 LINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR-AFGIPIRQFTH 196

Query: 86  GVLML-----EILSGKK--STAV 101
            ++ L     EIL G +  ST+V
Sbjct: 197 EIITLWYRPPEILLGSRHYSTSV 219

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 44.9 bits (107), Expect = 7e-06
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 3/28 (10%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDS 63
           +GL +LH +   R++HRDLK  NIL+ S
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTS 155

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 44.6 bits (106), Expect = 7e-06
 Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------Y 65
           + + + + H      ++HRD+K  NIL+D                              Y
Sbjct: 158 VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 214

Query: 66  MPPEY-ALRGFFSIKSDVFSFGVLMLEILSGK 96
            PPE+     +    + V+S G+L+ +++ G 
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 246

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 44.6 bits (106), Expect = 7e-06
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 32/91 (35%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------Y 65
           +   + + H      ++HRD+K  NIL+D                              Y
Sbjct: 148 VVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVY 204

Query: 66  MPPEY-ALRGFFSIKSDVFSFGVLMLEILSG 95
            PPE+ +   + ++ + V+S G+L+ +++ G
Sbjct: 205 SPPEWISRHQYHALPATVWSLGILLYDMVCG 235

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 44.5 bits (106), Expect = 8e-06
 Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 3/28 (10%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDS 63
            GL Y+H+    +I+HRD+KA+N+L+  
Sbjct: 135 NGLYYIHRN---KILHRDMKAANVLITR 159

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 44.5 bits (106), Expect = 8e-06
 Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 32/91 (35%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS-G---------------------------- 64
           I  GL +LH      I++RDLK  NILLD  G                            
Sbjct: 127 IILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPD 183

Query: 65  YMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
           Y+ PE  L   ++   D +SFGVL+ E+L G
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 44.6 bits (106), Expect = 8e-06
 Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 35/95 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           + +G+ YLH     +IIHRD+K SN+L+                                
Sbjct: 146 LIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPA 202

Query: 65  YMPPE---YALRGFFSIKSDVFSFGVLMLEILSGK 96
           +M PE      + F     DV++ GV +   + G+
Sbjct: 203 FMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 44.5 bits (106), Expect = 8e-06
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDS 63
           +GL +LH      I+HRDLK  NIL+ S
Sbjct: 131 RGLDFLHAN---CIVHRDLKPENILVTS 155

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 44.6 bits (106), Expect = 8e-06
 Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 34/99 (34%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
            R+I+ I +G+ YLHQ     I+H DLK  NILL S                        
Sbjct: 134 IRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL 190

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                   Y+ PE       +  +D+++ G++   +L+ 
Sbjct: 191 REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH 229

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 3/28 (10%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDS 63
           QGL YLHQ+    I+HRDLK +N+LLD 
Sbjct: 123 QGLEYLHQH---WILHRDLKPNNLLLDE 147

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 35/100 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
              I+ I  G+ YLH     +I H DLK  NI+L                          
Sbjct: 118 TSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174

Query: 64  --------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                    ++ PE        +++D++S GV+   +LSG
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 35/100 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
              I+ I  G+ YLH     +I H DLK  NI+L                          
Sbjct: 118 TSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174

Query: 64  --------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                    ++ PE        +++D++S GV+   +LSG
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 44.1 bits (104), Expect = 1e-05
 Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 33/98 (33%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
              +  + +GL ++H+      +H DLK  NI+  +                        
Sbjct: 258 VEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314

Query: 64  ------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                  +  PE A        +D++S GVL   +LSG
Sbjct: 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 3/28 (10%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDS 63
           +GL + H      ++HRDLK  N+L++ 
Sbjct: 112 KGLGFCHSR---NVLHRDLKPQNLLINR 136

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 34/94 (36%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           I   L YLH      IIHRDLK  NILL+                               
Sbjct: 139 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 195

Query: 65  --YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
             Y+ PE          SD+++ G ++ ++++G 
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 229

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 3/28 (10%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDS 63
           +GL Y H+    +++HRDLK  N+L++ 
Sbjct: 111 RGLAYCHRQ---KVLHRDLKPQNLLINE 135

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 3/28 (10%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDS 63
           QGL + H+    +I+HRDLK  N+L++ 
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINK 143

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 3/28 (10%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDS 63
           +G+ + HQ+   RI+HRDLK  N+L++S
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINS 154

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 3/28 (10%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDS 63
           QGL + H +   R++HRDLK  N+L+++
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINT 138

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 37/102 (36%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
            +I+  + + +  LH+   L I+HRDLK  NILLD                         
Sbjct: 127 RKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV 183

Query: 64  ----GYMPPE------YALRGFFSIKSDVFSFGVLMLEILSG 95
                Y+ PE            +  + D++S GV+M  +L+G
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 33/98 (33%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
              +  + + L +LH      I H D++  NI+  +                        
Sbjct: 105 VSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161

Query: 64  ------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                  Y  PE       S  +D++S G L+  +LSG
Sbjct: 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 23/100 (23%), Positives = 37/100 (37%), Gaps = 35/100 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
            + ++ I  G+ YLH     RI H DLK  NI+L                          
Sbjct: 111 TQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 167

Query: 64  --------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                    ++ PE        +++D++S GV+   +LSG
Sbjct: 168 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 23/100 (23%), Positives = 37/100 (37%), Gaps = 35/100 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
              ++ I  G+ YLH    L+I H DLK  NI+L                          
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173

Query: 64  --------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                    ++ PE        +++D++S GV+   +LSG
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 24/100 (24%), Positives = 35/100 (35%), Gaps = 35/100 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           +  +  I + L Y H      IIHRD+K   +LL S                        
Sbjct: 133 SHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV 189

Query: 64  --------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                    +M PE   R  +    DV+  GV++  +LSG
Sbjct: 190 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           + + L Y+H      I HRD+K  N+LLD 
Sbjct: 165 LFRSLAYIHS---FGICHRDIKPQNLLLDP 191

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 3/28 (10%)

Query: 36  QGLLYLHQYSRLRIIHRDLKASNILLDS 63
            G+ Y H     R++HRDLK  N+L++ 
Sbjct: 111 NGIAYCHDR---RVLHRDLKPQNLLINR 135

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 37/102 (36%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
             I+  + + + +LH      I+HRDLK  NILLD                         
Sbjct: 203 RSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL 259

Query: 64  ----GYMPPE------YALRGFFSIKSDVFSFGVLMLEILSG 95
               GY+ PE            +  + D+++ GV++  +L+G
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 42.9 bits (102), Expect = 3e-05
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 34/99 (34%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           +  I+ I + + Y H      I+HR+LK  N+LL S                        
Sbjct: 108 SHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 164

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                  GY+ PE   +  +S   D+++ GV++  +L G
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 31/97 (31%), Positives = 40/97 (41%), Gaps = 39/97 (40%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS-G---------------------------- 64
           I   L +LH+   L II+RD+K  NILLDS G                            
Sbjct: 168 IVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTI 224

Query: 65  -YMPPE---YALRGFFSIKS-DVFSFGVLMLEILSGK 96
            YM P+       G    K+ D +S GVLM E+L+G 
Sbjct: 225 EYMAPDIVRGGDSGH--DKAVDWWSLGVLMYELLTGA 259

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 34/99 (34%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           +  I+ I + + Y H      I+HR+LK  N+LL S                        
Sbjct: 131 SHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 187

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                  GY+ PE   +  +S   D+++ GV++  +L G
Sbjct: 188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           + + L Y+H    + I HRD+K  N+LLD 
Sbjct: 150 LLRSLAYIHS---IGICHRDIKPQNLLLDP 176

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 29/88 (32%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------------------YMP 67
           I     YLH      +I+RDLK  N+L+D                             + 
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALA 206

Query: 68  PEYALRGFFSIKSDVFSFGVLMLEILSG 95
           PE  L   ++   D ++ GVL+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 17/80 (21%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------GYMPPEYALRGF 75
           + I++ I + + YLH    + I HRD+K  N+L  S            G    E      
Sbjct: 120 SEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFG-FAKE-TTGEK 174

Query: 76  FSIKSDVFSFGVLMLEILSG 95
           +    D++S GV+M  +L G
Sbjct: 175 YDKSCDMWSLGVIMYILLCG 194

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 34/99 (34%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           A  ++ I + + YLH+     I+HRDLK  N+L  +                        
Sbjct: 151 ADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM 207

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                  GY  PE      +  + D++S G++   +L G
Sbjct: 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           + +++ +A  L +LH      I HRDLK  NIL + 
Sbjct: 114 SVVVQDVASALDFLHN---KGIAHRDLKPENILCEH 146

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 24/102 (23%), Positives = 34/102 (33%), Gaps = 37/102 (36%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
                 +   + YLH+     IIHRDLK  N+LL S                        
Sbjct: 242 KLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 298

Query: 64  -------GYMPPE---YALRGFFSIKSDVFSFGVLMLEILSG 95
                   Y+ PE         ++   D +S GV++   LSG
Sbjct: 299 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 38/97 (39%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           +   +  +HQ   L  +HRD+K  NIL+D                               
Sbjct: 184 MVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTP 240

Query: 65  -YMPPE-----YALRGFFSIKSDVFSFGVLMLEILSG 95
            Y+ PE        +G +  + D +S GV M E+L G
Sbjct: 241 DYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 42.1 bits (100), Expect = 5e-05
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 29/88 (32%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS-G-------------------------YMP 67
           +   L YLH      II+RDLK  NILLD  G                         Y+ 
Sbjct: 115 VCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIA 171

Query: 68  PEYALRGFFSIKSDVFSFGVLMLEILSG 95
           PE      ++   D +SFG+L+ E+L+G
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEMLAG 199

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 3/30 (10%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
             Q + + H++     IHRD+K  NIL+  
Sbjct: 111 TLQAVNFCHKH---NCIHRDVKPENILITK 137

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           I  G+ + H +    IIHRD+K  NIL+  
Sbjct: 133 IINGIGFCHSH---NIIHRDIKPENILVSQ 159

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 42.0 bits (99), Expect = 7e-05
 Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 3/30 (10%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           + + + ++H    L I HRD+K  N+L++S
Sbjct: 150 LFRAVGFIHS---LGICHRDIKPQNLLVNS 176

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 41.9 bits (99), Expect = 7e-05
 Identities = 24/102 (23%), Positives = 33/102 (32%), Gaps = 37/102 (36%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
                 +   + YLH      IIHRDLK  N+LL S                        
Sbjct: 117 KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173

Query: 64  -------GYMPPE---YALRGFFSIKSDVFSFGVLMLEILSG 95
                   Y+ PE         ++   D +S GV++   LSG
Sbjct: 174 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 41.8 bits (97), Expect = 7e-05
 Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 4/92 (4%)

Query: 19  KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGYMPPEYALRGFFSI 78
            +L        I+  +   L        LR  HRDL   N+LL    +   +        
Sbjct: 155 TKLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHY--TLNGK 210

Query: 79  KSDVFSFGVLMLEILSGKKSTAVYNTGSFNLL 110
            S + S G+ +  I              F  +
Sbjct: 211 SSTIPSCGLQVSIIDYTLSRLERDGIVVFCDV 242

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 41.9 bits (99), Expect = 8e-05
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 35/100 (35%)

Query: 28  ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------ 63
           +  I+ I + +L+ HQ   + ++HR+LK  N+LL S                        
Sbjct: 113 SHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA 169

Query: 64  --------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                   GY+ PE   +  +    D+++ GV++  +L G
Sbjct: 170 WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 41.5 bits (98), Expect = 8e-05
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 32/92 (34%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------YMP----------PEY 70
           I   + Y H   + RI+HRDLKA N+LLD+              +            P Y
Sbjct: 123 IVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPY 179

Query: 71  AL------RGFFSIKSDVFSFGVLMLEILSGK 96
           A       + +   + DV+S GV++  ++SG 
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 211

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 3/30 (10%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           +  G+ Y+H  S   I+HRDLK +N L++ 
Sbjct: 165 LLVGVKYVH--SA-GILHRDLKPANCLVNQ 191

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 21/99 (21%), Positives = 32/99 (32%), Gaps = 40/99 (40%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------- 64
           I   +  +H+   L  +HRD+K  NILLD                               
Sbjct: 171 IVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTP 227

Query: 65  -YMPPE-------YALRGFFSIKSDVFSFGVLMLEILSG 95
            Y+ PE           G +  + D ++ GV   E+  G
Sbjct: 228 DYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG 266

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           ID+   LD  + + I   +   + YL       IIHRD+K  NI++  
Sbjct: 121 IDRHPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAE 165

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 32/113 (28%)

Query: 12  DAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------- 64
           +   + +  L   ++   + + +  G+ +LH      IIHRDLK SNI++ S        
Sbjct: 152 NLCQVIQMELDHERMSYLLYQ-MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILD 207

Query: 65  ---------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                Y  PE  L   +    D++S G +M E++  K
Sbjct: 208 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 31/88 (35%)

Query: 37  GLLYLHQYSRLRIIHRDLKASNILLDSG----------------------------YMPP 68
           G+ +LH      IIHRDLK SNI++ S                             Y  P
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195

Query: 69  EYALRGFFSIKSDVFSFGVLMLEILSGK 96
           E  L   +    D++S G +M E++ G 
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGG 223

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 7/34 (20%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           ++ G+     YLH    + I HRD+K  N+LLD 
Sbjct: 114 LMAGVV----YLH---GIGITHRDIKPENLLLDE 140

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 7/34 (20%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           ++ G+     YLH    + I HRD+K  N+LLD 
Sbjct: 114 LMAGVV----YLH---GIGITHRDIKPENLLLDE 140

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
               R+ + + R R+ + I   + Y H   R  ++HRDLK  N+LLD+
Sbjct: 103 CKHGRVEEMEAR-RLFQQILSAVDYCH---RHMVVHRDLKPENVLLDA 146

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 39.5 bits (92), Expect = 5e-04
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 20  RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL 61
           + L      +II+ + QGL YLH  ++ RIIH D+K  NILL
Sbjct: 141 QGLPLPCVKKIIQQVLQGLDYLH--TKCRIIHTDIKPENILL 180

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 39.3 bits (92), Expect = 5e-04
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 3/27 (11%)

Query: 37  GLLYLHQYSRLRIIHRDLKASNILLDS 63
           G  ++H      IIHRDLK +N LL+ 
Sbjct: 141 GENFIH--ES-GIIHRDLKPANCLLNQ 164

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 7/34 (20%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           II  I     Y H   R +I+HRDLK  N+LLD 
Sbjct: 117 IICAIE----YCH---RHKIVHRDLKPENLLLDD 143

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 39.4 bits (92), Expect = 5e-04
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 7/34 (20%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           I+ G+     Y H   R  ++HRDLK  N+LLD+
Sbjct: 125 ILSGVD----YCH---RHMVVHRDLKPENVLLDA 151

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 39.3 bits (92), Expect = 5e-04
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 7/38 (18%)

Query: 30  IIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSGYMP 67
           ++ G++    Y H    ++I HRDLK  N LLD    P
Sbjct: 125 LLSGVS----YCH---SMQICHRDLKLENTLLDGSPAP 155

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 38.9 bits (91), Expect = 7e-04
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)

Query: 34  IAQGLLYLHQYSRLRIIHRDLKASNILLDS 63
           +   L  +H    +  IHRD+K  N+LLD 
Sbjct: 177 VVLALDAIHS---MGFIHRDVKPDNMLLDK 203

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 31/112 (27%)

Query: 12  DAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG------- 64
           D   I   +  + +++  ++  + +GL Y+H      ++HRDLK  N+ ++         
Sbjct: 114 DLQKIMGLKFSEEKIQY-LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILD 169

Query: 65  -------------------YMPPEYALRGF-FSIKSDVFSFGVLMLEILSGK 96
                              Y  PE  L    ++   D++S G +M E+L+GK
Sbjct: 170 FGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 38.9 bits (91), Expect = 7e-04
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 3/27 (11%)

Query: 37  GLLYLHQYSRLRIIHRDLKASNILLDS 63
            + YLH  S   ++HRD+K SNILL++
Sbjct: 121 VIKYLH--SG-GLLHRDMKPSNILLNA 144

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	216
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.98
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.97
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.97
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.97
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.97
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.97
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.97
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.97
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.96
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.96
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.96
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.96
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.96
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.96
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.96
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.96
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.96
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.96
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.96
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.96
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.96
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.96
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.96
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.96
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.96
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.96
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.95
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.95
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.95
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.95
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.95
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.95
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.95
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.95
3niz_A	311	Rhodanese family protein; structural genomics, str	99.95
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.95
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.95
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.95
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.95
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.95
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.95
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.95
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.95
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.95
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.95
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.95
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.95
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.95
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.95
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.95
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.95
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.95
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.95
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.95
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.95
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.95
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.95
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.95
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.95
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.95
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.95
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.95
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.95
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.95
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.95
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.95
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.95
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.95
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.95
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.95
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.95
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.95
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.95
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.95
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.95
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.95
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.95
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.95
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.95
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.95
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.95
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.95
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.95
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.95
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.95
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.95
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.95
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.95
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.94
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.94
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.94
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.94
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.94
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.94
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.94
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.94
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.94
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.94
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.94
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.94
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.94
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.94
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.94
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.94
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.94
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.94
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.94
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.94
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.94
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.94
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.94
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.94
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.94
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.94
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.94
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.94
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.94
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.94
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.94
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.94
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.94
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.94
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.94
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.94
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.94
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.94
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.94
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.94
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.94
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.94
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.94
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.94
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.94
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.94
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.94
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.94
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.94
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.94
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.94
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.94
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.94
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.94
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.94
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.94
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.94
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.94
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.94
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.94
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.94
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.94
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.94
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.94
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.94
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.94
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.94
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.94
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.94
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.93
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.93
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.93
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.93
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.93
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.93
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.93
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.93
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.93
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.93
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.93
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.93
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.93
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.93
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.93
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.93
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.93
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.93
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.93
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.93
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.93
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.93
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.93
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.93
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.93
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.93
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.93
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.93
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.93
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.93
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.93
3uqc_A	286	Probable conserved transmembrane protein; structur	99.93
3bhy_A	283	Death-associated protein kinase 3; death associate	99.93
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.93
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.93
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.93
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.93
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.93
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.93
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.93
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.93
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.93
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.93
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.93
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.93
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.93
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.93
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.93
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.93
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.93
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.93
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.93
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.93
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.93
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.93
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.93
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.93
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.93
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.92
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.92
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.92
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.92
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.92
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.92
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.92
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.92
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.92
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.92
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.92
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.92
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.92
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.91
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.91
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.9
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.84
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.65
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.3
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.03
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.75
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.64
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.37
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.26
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.25
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.08
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.36
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	94.75
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	92.92
3ats_A	357	Putative uncharacterized protein; hypothetical pro	90.06
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	89.81
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	85.97

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.4e-37  Score=248.75  Aligned_cols=160  Identities=24%  Similarity=0.329  Sum_probs=125.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.+++...+..+++.++..|+.|++.||+|||+++   ||||||||+|||++.               
T Consensus       106 ~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~  182 (307)
T 3omv_A          106 LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVK  182 (307)
T ss_dssp             CEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred             EEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceec
Confidence            4899999    787776666678999999999999999999999998   999999999999976               


Q ss_pred             ----------------CCCChhhhhcC---CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 ----------------GYMPPEYALRG---FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 ----------------~y~aPE~~~~~---~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                      .|+|||++.+.   .|+.++|||||||++|||++|+.||........     ........    
T Consensus       183 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-----~~~~~~~~----  253 (307)
T 3omv_A          183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-----IIFMVGRG----  253 (307)
T ss_dssp             -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-----HHHHHHTT----
T ss_pred             ccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-----HHHHHhcC----
Confidence                            29999999743   589999999999999999999999964332211     11111111    


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                      ...|.+.  ..+..++..+.+++.+||+.+|++|||+.||++.|+.+...+|
T Consensus       254 ~~~p~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          254 YASPDLS--KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             CCCCCST--TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             CCCCCcc--cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence            1112111  1112256789999999999999999999999999998766665

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.1e-36  Score=242.86  Aligned_cols=154  Identities=24%  Similarity=0.329  Sum_probs=122.2

Q ss_pred             eeeeecc----cccccccC------------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---
Q 040682            3 KKLVYSK----LLDAANID------------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---   63 (216)
                      .||||||    +|.+++..            ....+++.+++.++.|++.||+|||+++   ||||||||+|||++.   
T Consensus        90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~  166 (299)
T 4asz_A           90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLL  166 (299)
T ss_dssp             EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCc
Confidence            5899999    77776332            2357999999999999999999999998   999999999999976   


Q ss_pred             ----------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhh
Q 040682           64 ----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAW  114 (216)
Q Consensus        64 ----------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~  114 (216)
                                                  .|+|||++.+..++.++|||||||++|||+| |+.||......+  ....  
T Consensus       167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~--  242 (299)
T 4asz_A          167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIEC--  242 (299)
T ss_dssp             EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHH--
T ss_pred             EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHH--
Confidence                                        2999999999999999999999999999998 899986533211  1111  


Q ss_pred             hhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          115 DLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                        ...+..     +.     .+..++.++.+++.+||+.||++|||+.||++.|+++....
T Consensus       243 --i~~~~~-----~~-----~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~  291 (299)
T 4asz_A          243 --ITQGRV-----LQ-----RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS  291 (299)
T ss_dssp             --HHHTCC-----CC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             --HHcCCC-----CC-----CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence              111111     11     11125667899999999999999999999999999875443

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.8e-36  Score=244.36  Aligned_cols=154  Identities=24%  Similarity=0.327  Sum_probs=122.1

Q ss_pred             eeeeecc----cccccccC--------------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            3 KKLVYSK----LLDAANID--------------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~--------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      .||||||    +|.++...              ....+++.+++.|+.|++.||+|||+++   ||||||||+|||++.+
T Consensus       118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~  194 (329)
T 4aoj_A          118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQG  194 (329)
T ss_dssp             EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETT
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCC
Confidence            5899999    77776322              2356999999999999999999999998   9999999999999762


Q ss_pred             -------------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhh
Q 040682           65 -------------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGH  112 (216)
Q Consensus        65 -------------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~  112 (216)
                                                     |+|||++.+..++.++|||||||++|||+| |+.||.......  ....
T Consensus       195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~  272 (329)
T 4aoj_A          195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE--AIDC  272 (329)
T ss_dssp             TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH--HHHH
T ss_pred             CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH--HHHH
Confidence                                           999999999999999999999999999999 899986433211  1111


Q ss_pred             hhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          113 AWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                          ...+.     .+..     +..++.++.+++.+||+.||++|||+.||++.|+.+...+
T Consensus       273 ----i~~g~-----~~~~-----p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p  321 (329)
T 4aoj_A          273 ----ITQGR-----ELER-----PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP  321 (329)
T ss_dssp             ----HHHTC-----CCCC-----CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred             ----HHcCC-----CCCC-----cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence                11110     1111     1125567899999999999999999999999999875543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=8.3e-36  Score=242.20  Aligned_cols=153  Identities=21%  Similarity=0.207  Sum_probs=121.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++.. ..+.+++.+++.++.|++.||+|||+++   ||||||||+|||++.               
T Consensus       125 ~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~  200 (336)
T 4g3f_A          125 VNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALC  200 (336)
T ss_dssp             EEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEE
T ss_pred             EEEEEeccCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeE
Confidence            5899999    6776633 3457999999999999999999999998   999999999999964               


Q ss_pred             --------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 --------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 --------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                          .|+|||++.+..++.++|||||||++|||++|+.||........  ...+..    .   
T Consensus       201 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~i~~----~---  271 (336)
T 4g3f_A          201 LQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL--CLKIAS----E---  271 (336)
T ss_dssp             C------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC--HHHHHH----S---
T ss_pred             ccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH--HHHHHc----C---
Confidence                                19999999999999999999999999999999999975443322  111110    0   


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                           ..+....+..++..+.+++.+||+.||++|||+.|+++.|.....
T Consensus       272 -----~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~  316 (336)
T 4g3f_A          272 -----PPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ  316 (336)
T ss_dssp             -----CCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----CCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence                 000011122256678999999999999999999999998876433

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.2e-35  Score=239.30  Aligned_cols=168  Identities=21%  Similarity=0.175  Sum_probs=125.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCC-----CCCeecCCCCCCceeecCC---------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYS-----RLRIIHRDLKASNILLDSG---------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~iiH~dik~~nil~~~~---------   64 (216)
                      .||||||    +|.++..  +..+++.++..++.|++.||+|||+++     .++|+||||||+|||++.+         
T Consensus        76 ~~lV~Ey~~~gsL~~~l~--~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG  153 (303)
T 3hmm_A           76 LWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  153 (303)
T ss_dssp             EEEEEECCTTCBHHHHHH--HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEEecCCCCCcHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence            4899999    7777743  346999999999999999999999871     2349999999999999762         


Q ss_pred             ------------------------CCChhhhhcC------CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhh-
Q 040682           65 ------------------------YMPPEYALRG------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHA-  113 (216)
Q Consensus        65 ------------------------y~aPE~~~~~------~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~-  113 (216)
                                              |+|||++.+.      .++.++|||||||++|||++|.+|+.........+.... 
T Consensus       154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~  233 (303)
T 3hmm_A          154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP  233 (303)
T ss_dssp             TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred             CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence                                    9999999765      367799999999999999999988765444332211110 


Q ss_pred             ----hhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          114 ----WDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       114 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                          ............++|.++....+.++...+.+++.+||+.||++|||+.||++.|+.+.
T Consensus       234 ~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~  296 (303)
T 3hmm_A          234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence                00000111122334444444444447788999999999999999999999999998763

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=5.3e-36  Score=241.42  Aligned_cols=150  Identities=25%  Similarity=0.403  Sum_probs=119.9

Q ss_pred             eeeeecc----cccccccC---------------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANID---------------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~---------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .+|||||    +|.+++..               .+..+++.++..++.|++.||+|||+++   ||||||||+|||++.
T Consensus       104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~  180 (308)
T 4gt4_A          104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYD  180 (308)
T ss_dssp             CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECG
T ss_pred             EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECC
Confidence            4899999    77776322               1346999999999999999999999998   999999999999976


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~  111 (216)
                                                     .|+|||++.+..++.++|||||||++|||+| |..||......  ....
T Consensus       181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~~  258 (308)
T 4gt4_A          181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVVE  258 (308)
T ss_dssp             GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHHH
T ss_pred             CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence                                           2999999999999999999999999999998 89998654321  1111


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                          ....+..     +     +.+.+++..+.+++.+||+.||++|||+.||++.|+.+
T Consensus       259 ----~i~~~~~-----~-----~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          259 ----MIRNRQV-----L-----PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             ----HHHTTCC-----C-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             ----HHHcCCC-----C-----CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence                1111111     1     11122567799999999999999999999999999975

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.5e-35  Score=241.54  Aligned_cols=151  Identities=27%  Similarity=0.323  Sum_probs=119.6

Q ss_pred             eeeeecc----cccccccC---------------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANID---------------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~---------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .||||||    +|.+++..               .+..+++.++..++.||+.||+|||+++   ||||||||+|||++.
T Consensus       144 ~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl~~  220 (353)
T 4ase_A          144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSE  220 (353)
T ss_dssp             CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECG
T ss_pred             EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceeeCC
Confidence            4799999    77766322               2345899999999999999999999998   999999999999975


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~  111 (216)
                                                     .|+|||++.+..|+.++|||||||++|||+| |..||........    
T Consensus       221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~----  296 (353)
T 4ase_A          221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----  296 (353)
T ss_dssp             GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH----
T ss_pred             CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH----
Confidence                                           2999999999999999999999999999998 8999865432211    


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                       .......+     ..+..+     ..++.++.+++.+||+.||++|||+.||+++|+.+
T Consensus       297 -~~~~i~~g-----~~~~~p-----~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l  345 (353)
T 4ase_A          297 -FCRRLKEG-----TRMRAP-----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  345 (353)
T ss_dssp             -HHHHHHHT-----CCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -HHHHHHcC-----CCCCCC-----ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence             11111111     111111     12556789999999999999999999999999875

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=8.5e-35  Score=237.33  Aligned_cols=145  Identities=21%  Similarity=0.269  Sum_probs=115.3

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .||||||    +|.++.. .+...+++.+++.|+.||+.||+|||+++   ||||||||+|||++.              
T Consensus        98 ~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~  174 (350)
T 4b9d_A           98 LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARV  174 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESC
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEccccccee
Confidence            5899999    6666643 34456899999999999999999999999   999999999999976              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||++.+..|+.++|||||||++|||++|+.||.......     ....... ...     +
T Consensus       175 ~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-----~~~~i~~-~~~-----~  243 (350)
T 4b9d_A          175 LNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-----LVLKIIS-GSF-----P  243 (350)
T ss_dssp             CCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHH-TCC-----C
T ss_pred             ecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-----HHHHHHc-CCC-----C
Confidence                           2999999999999999999999999999999999996533211     1111111 111     1


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ..     +...+.++.+|+.+||+.||++|||+.|+++
T Consensus       244 ~~-----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          244 PV-----SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CC-----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11     1124567899999999999999999999986

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=8.4e-35  Score=232.30  Aligned_cols=147  Identities=22%  Similarity=0.371  Sum_probs=112.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++.. ..+.+++.++..++.|++.||+|||+++ ++|+||||||+|||++.               
T Consensus       104 ~~lvmEy~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~  181 (290)
T 3fpq_A          104 IVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EEEEEeCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence            5899999    6776643 3457999999999999999999999975 56999999999999963               


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                   .|+|||++.+ .|+.++|||||||++|||++|+.||.......     .........     ..+  
T Consensus       182 ~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-----~~~~~i~~~-----~~~--  248 (290)
T 3fpq_A          182 KRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-----QIYRRVTSG-----VKP--  248 (290)
T ss_dssp             CCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-----HHHHHHTTT-----CCC--
T ss_pred             CCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-----HHHHHHHcC-----CCC--
Confidence                         2999998865 69999999999999999999999986432211     111111111     011  


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                        ...+...++++.+++.+||+.||++|||+.|+++
T Consensus       249 --~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          249 --ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             --GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              1111113456899999999999999999999875

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.2e-34  Score=234.57  Aligned_cols=146  Identities=20%  Similarity=0.252  Sum_probs=114.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .||||||    +|.++..  ++.+++.++..++.||+.||+|||+++   ||||||||+|||++.+              
T Consensus       146 ~~ivmEy~~gg~L~~~l~--~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~  220 (346)
T 4fih_A          146 LWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV  220 (346)
T ss_dssp             EEEEECCCTTEEHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEeCCCCCcHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceec
Confidence            5899999    6666633  346999999999999999999999999   9999999999999752              


Q ss_pred             ---------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           65 ---------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        65 ---------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                     |+|||++.+..|+.++||||+||++|||++|..||.......  ....+..    .     ..+.
T Consensus       221 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~~----~-----~~~~  289 (346)
T 4fih_A          221 SKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRD----N-----LPPR  289 (346)
T ss_dssp             CSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHH----S-----SCCC
T ss_pred             CCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHc----C-----CCCC
Confidence                           999999999999999999999999999999999996432211  1111110    0     1111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..   .....+..+.+|+.+||+.||++|||+.|++++
T Consensus       290 ~~---~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          290 LK---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             CS---CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CC---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            11   111255678999999999999999999998763

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.3e-33  Score=235.38  Aligned_cols=146  Identities=20%  Similarity=0.243  Sum_probs=114.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++..  .+.+++.++..++.||+.||+|||+++   ||||||||+|||++.               
T Consensus       223 ~~iVmEy~~gG~L~~~i~--~~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~  297 (423)
T 4fie_A          223 LWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV  297 (423)
T ss_dssp             EEEEEECCTTEEHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEeCCCCCcHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceEC
Confidence            5899999    6666633  345999999999999999999999999   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..|+.++|||||||++|||++|..||.......  ....+..    .     ..+.
T Consensus       298 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~~----~-----~~~~  366 (423)
T 4fie_A          298 SKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRD----N-----LPPR  366 (423)
T ss_dssp             CSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHH----S-----CCCC
T ss_pred             CCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHc----C-----CCCC
Confidence                          2999999999999999999999999999999999996432211  1111111    0     0111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      +.   .....+..+.+|+.+||+.||++|||+.|++++
T Consensus       367 ~~---~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          367 LK---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             CS---CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             Cc---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            11   111145678999999999999999999998763

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.98  E-value=3.6e-33  Score=221.19  Aligned_cols=143  Identities=20%  Similarity=0.236  Sum_probs=112.0

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .||||||   +|.++. ..++.+++.+++.++.|++.||+|||+++   |+||||||+|||++.                
T Consensus        88 ~~ivmEy~~g~L~~~l-~~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  163 (275)
T 3hyh_A           88 IIMVIEYAGNELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             EEEEEECCCEEHHHHH-HHSCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred             EEEEEeCCCCCHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecC
Confidence            5899999   444442 33457999999999999999999999999   999999999999976                


Q ss_pred             ------------CCCChhhhhcCCC-CcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 ------------GYMPPEYALRGFF-SIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~-~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                  .|+|||++.+..+ +.++||||+||++|+|++|+.||......  .....    .....      ...
T Consensus       164 ~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~--~~~~~----i~~~~------~~~  231 (275)
T 3hyh_A          164 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKN----ISNGV------YTL  231 (275)
T ss_dssp             -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH----HHHTC------CCC
T ss_pred             CCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH--HHHHH----HHcCC------CCC
Confidence                        2999999998876 57999999999999999999999643211  11111    11111      111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      +     ...+..+.+++.+||+.||++|||+.|+++
T Consensus       232 p-----~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          232 P-----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             C-----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             C-----CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            1     114557889999999999999999999986

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.97  E-value=4e-33  Score=223.77  Aligned_cols=138  Identities=25%  Similarity=0.252  Sum_probs=109.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .||||||    +|.++. ...+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.+              
T Consensus       101 ~~ivmEy~~gg~L~~~l-~~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~  176 (304)
T 3ubd_A          101 LYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKES  176 (304)
T ss_dssp             EEEEECCCTTCEEHHHH-HHHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred             EEEEEEcCCCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceec
Confidence            5899999    666653 33457999999999999999999999999   9999999999999762              


Q ss_pred             ---------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           65 ---------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        65 ---------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                     |+|||++.+..++.++||||+||++|||++|+.||.......  ....+   . ...      ..
T Consensus       177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~--~~~~i---~-~~~------~~  244 (304)
T 3ubd_A          177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE--TMTMI---L-KAK------LG  244 (304)
T ss_dssp             ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH---H-HCC------CC
T ss_pred             cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH--HHHHH---H-cCC------CC
Confidence                           999999999999999999999999999999999996433211  11111   1 110      11


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTM  161 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  161 (216)
                      .     +...+.++.+++.+||+.||++|||+
T Consensus       245 ~-----p~~~s~~~~~li~~~L~~dP~~R~ta  271 (304)
T 3ubd_A          245 M-----PQFLSPEAQSLLRMLFKRNPANRLGA  271 (304)
T ss_dssp             C-----CTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred             C-----CCcCCHHHHHHHHHHcccCHHHCCCC
Confidence            1     11145678999999999999999985

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.97  E-value=2.2e-33  Score=225.60  Aligned_cols=142  Identities=21%  Similarity=0.217  Sum_probs=112.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .||||||    +|.++. ...+.+++.+++.++.||+.||+|||+++   |+||||||+|||++.+              
T Consensus       107 ~yivmEy~~gG~L~~~i-~~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~  182 (311)
T 4aw0_A          107 LYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL  182 (311)
T ss_dssp             EEEEECCCTTEEHHHHH-HHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCCHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceec
Confidence            5899999    565553 33457999999999999999999999999   9999999999999752              


Q ss_pred             -----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           65 -----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        65 -----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                       |+|||++.+..|+.++||||+||++|||++|..||.......  ....+    ....      
T Consensus       183 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i----~~~~------  250 (311)
T 4aw0_A          183 SPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL--IFAKI----IKLE------  250 (311)
T ss_dssp             CTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH----HHTC------
T ss_pred             CCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH----HcCC------
Confidence                             999999999999999999999999999999999996533211  11111    1111      


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVV  165 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl  165 (216)
                      ...+     ...+.++.+|+.+||+.||++|||+.|++
T Consensus       251 ~~~p-----~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          251 YDFP-----EKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             CCCC-----TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             CCCC-----cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            1111     11455789999999999999999999864

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.97  E-value=3.6e-30  Score=208.31  Aligned_cols=166  Identities=33%  Similarity=0.576  Sum_probs=133.0

Q ss_pred             eeeeecc----cccccccCC---CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANIDK---KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++||||    +|.++....   ...+++.+++.++.|++.||+|||+++   ++||||||+||+++.            
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~  186 (321)
T 2qkw_B          110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS  186 (321)
T ss_dssp             CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred             EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccc
Confidence            5899999    777763332   235899999999999999999999998   999999999999975            


Q ss_pred             -------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhhhhhhccCccc
Q 040682           64 -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 -------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  123 (216)
                                         .|+|||.+.+..++.++||||||+++|||++|+.||........ ....+.........+.
T Consensus       187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (321)
T 2qkw_B          187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE  266 (321)
T ss_dssp             EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCC
T ss_pred             cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHH
Confidence                               29999999999999999999999999999999999876554433 3334433334444455


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      ..+++..... ...+.+..+.+++.+||+.+|++||++.|+++.|+...
T Consensus       267 ~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l  314 (321)
T 2qkw_B          267 QIVDPNLADK-IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL  314 (321)
T ss_dssp             SSSSSSCTTC-SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HhcChhhccc-cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            5555544333 23347889999999999999999999999999999753

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.97  E-value=1.7e-31  Score=222.07  Aligned_cols=159  Identities=21%  Similarity=0.217  Sum_probs=113.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      -||||||   +|.++ ....+.+++.+++.+++|++.||+|||+++   ||||||||+|||++.                
T Consensus       134 ~~ivmE~~~g~L~~~-i~~~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~  209 (398)
T 4b99_A          134 VYVVLDLMESDLHQI-IHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLC  209 (398)
T ss_dssp             EEEEEECCSEEHHHH-HTSSSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred             EEEEEeCCCCCHHHH-HHhcCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeeecc
Confidence            4899999   55554 344567999999999999999999999999   999999999999975                


Q ss_pred             -----------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc-------
Q 040682           64 -----------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK-------  118 (216)
Q Consensus        64 -----------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~-------  118 (216)
                                       .|+|||++.+. .++.++||||+||++|||++|++||.+......  ...+.....       
T Consensus       210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~--l~~I~~~~g~p~~~~~  287 (398)
T 4b99_A          210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ--LQLIMMVLGTPSPAVI  287 (398)
T ss_dssp             ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH--HHHHHHHHCCCCGGGT
T ss_pred             cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH--HHHHHHhcCCCChHHh
Confidence                             29999998876 568999999999999999999999976543221  111111000       


Q ss_pred             ----cCccccccc--cccccchh---hHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          119 ----DDRVHELID--PVITQDEI---SLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       119 ----~~~~~~~~~--~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                          .......+.  +.......   ....+.++.+|+.+||+.||++|||+.|++++
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                000000000  00000000   01135678999999999999999999998753

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.97  E-value=6.9e-31  Score=210.91  Aligned_cols=143  Identities=20%  Similarity=0.239  Sum_probs=105.7

Q ss_pred             eeeeecc----cccccccCCC--CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK----LLDAANIDKK--RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      -||||||    +|.++.....  ....+..++.++.|++.||+|||+++   |+||||||+|||++.             
T Consensus        90 l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~DFGla~  166 (299)
T 4g31_A           90 LYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVT  166 (299)
T ss_dssp             EEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCCCC-
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEccCccce
Confidence            4899999    6766633222  23456778899999999999999999   999999999999965             


Q ss_pred             ----------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh
Q 040682           64 ----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD  115 (216)
Q Consensus        64 ----------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~  115 (216)
                                                  .|+|||++.+..|+.++|||||||++|||++   ||....    ...... .
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~----~~~~~~-~  238 (299)
T 4g31_A          167 AMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM----ERVRTL-T  238 (299)
T ss_dssp             -------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----HHHHHH-H
T ss_pred             ecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----HHHHHH-H
Confidence                                        1999999999999999999999999999996   553210    000000 0


Q ss_pred             hhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          116 LWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ....        ...  .+...+..+...+++.+||+.||++|||+.|+++
T Consensus       239 ~~~~--------~~~--p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          239 DVRN--------LKF--PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHT--------TCC--CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHhc--------CCC--CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0000        011  1112224456788999999999999999999986

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.97  E-value=6.1e-30  Score=207.19  Aligned_cols=168  Identities=36%  Similarity=0.602  Sum_probs=132.2

Q ss_pred             eeeeecc----cccccccC---CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-----------
Q 040682            3 KKLVYSK----LLDAANID---KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-----------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-----------   64 (216)
                      .++||||    +|.++...   ....+++..+..++.|++.||+|||++...+++||||||+||+++.+           
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~  181 (326)
T 3uim_A          102 RLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA  181 (326)
T ss_dssp             CEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSC
T ss_pred             eEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccc
Confidence            4799999    66666332   33459999999999999999999999922229999999999999762           


Q ss_pred             -------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCC---CCccchhhhhhhhhccCcc
Q 040682           65 -------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN---TGSFNLLGHAWDLWKDDRV  122 (216)
Q Consensus        65 -------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~  122 (216)
                                         |+|||.+.+..++.++||||||+++|+|++|..||....   ........+..........
T Consensus       182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (326)
T 3uim_A          182 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL  261 (326)
T ss_dssp             EECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCS
T ss_pred             cccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhh
Confidence                               999999999999999999999999999999999986322   2222334444444445555


Q ss_pred             ccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          123 HELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ....+....... ..+.+..+.+++.+||+.+|.+|||+.||+++|++.
T Consensus       262 ~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          262 EALVDVDLQGNY-KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             TTSSCTTCTTSC-CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             hhhcChhhcccc-CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            555555554433 344788999999999999999999999999999974

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.97  E-value=8.3e-31  Score=215.57  Aligned_cols=95  Identities=25%  Similarity=0.364  Sum_probs=82.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++.    +.+++.+++.+++|++.||+|||+++   |+||||||+|||++.               
T Consensus        95 ~~lvmE~~~g~~L~~~~----~~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~  167 (361)
T 4f9c_A           95 VVIAMPYLEHESFLDIL----NSLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQG  167 (361)
T ss_dssp             EEEEEECCCCCCHHHHH----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEEeCCCcccHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence            4899999    455543    24899999999999999999999999   999999999999853               


Q ss_pred             -------------------------------------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCC
Q 040682           64 -------------------------------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKST   99 (216)
Q Consensus        64 -------------------------------------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~   99 (216)
                                                                 .|+|||++.+. .++.++||||+||++|||++|+.||
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf  247 (361)
T 4f9c_A          168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF  247 (361)
T ss_dssp             CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred             cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence                                                       19999999876 5899999999999999999999999


Q ss_pred             CcCCC
Q 040682          100 AVYNT  104 (216)
Q Consensus       100 ~~~~~  104 (216)
                      .....
T Consensus       248 ~~~~~  252 (361)
T 4f9c_A          248 YKASD  252 (361)
T ss_dssp             SCCSS
T ss_pred             CCCCC
Confidence            65443

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.96  E-value=2e-29  Score=201.69  Aligned_cols=159  Identities=24%  Similarity=0.231  Sum_probs=119.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhh--------cCCCCCeecCCCCCCceeecC-------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLH--------QYSRLRIIHRDLKASNILLDS-------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~iiH~dik~~nil~~~-------   63 (216)
                      .|+||||    +|.++.  ....+++.+++.++.|++.||+|||        +.+   |+||||||+|||++.       
T Consensus        81 ~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~  155 (301)
T 3q4u_A           81 LWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIA  155 (301)
T ss_dssp             EEEEECCCTTCBHHHHH--TTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEEC
T ss_pred             eEEehhhccCCCHHHHH--hhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEe
Confidence            5799999    666664  3456999999999999999999999        777   999999999999975       


Q ss_pred             --------------------------CCCChhhhhcC------CCCcchhhhhHHHHHHHHHhC----------CCCCCc
Q 040682           64 --------------------------GYMPPEYALRG------FFSIKSDVFSFGVLMLEILSG----------KKSTAV  101 (216)
Q Consensus        64 --------------------------~y~aPE~~~~~------~~~~~~Dv~s~G~~l~ell~g----------~~~~~~  101 (216)
                                                .|+|||.+.+.      .++.++|||||||++|||++|          ..||..
T Consensus       156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~  235 (301)
T 3q4u_A          156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD  235 (301)
T ss_dssp             CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence                                      29999999876      345799999999999999999          667654


Q ss_pred             CCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          102 YNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ............ ...    ......+..+....+...+..+.+++.+||+.+|++|||+.||++.|+++
T Consensus       236 ~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          236 VVPNDPSFEDMR-KVV----CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             TSCSSCCHHHHH-HHH----TTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCcchhhhh-HHH----hccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            433332211111 111    01111222222233334778899999999999999999999999999875

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.96  E-value=4.9e-30  Score=207.88  Aligned_cols=166  Identities=21%  Similarity=0.257  Sum_probs=121.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcC----------CCCCeecCCCCCCceeecCC----
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQY----------SRLRIIHRDLKASNILLDSG----   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~----------~~~~iiH~dik~~nil~~~~----   64 (216)
                      .++||||    +|.++...  +.+++.+++.++.|++.||+|||+.          +   |+||||||+||+++.+    
T Consensus        97 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~k  171 (322)
T 3soc_A           97 LWLITAFHEKGSLSDFLKA--NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTAC  171 (322)
T ss_dssp             EEEEEECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEE
T ss_pred             EEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEE
Confidence            4899999    67766433  4599999999999999999999998          7   9999999999999752    


Q ss_pred             ---------------------------CCChhhhhcC-----CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhh
Q 040682           65 ---------------------------YMPPEYALRG-----FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGH  112 (216)
Q Consensus        65 ---------------------------y~aPE~~~~~-----~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~  112 (216)
                                                 |+|||++.+.     .++.++|||||||++|||++|..||.............
T Consensus       172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~  251 (322)
T 3soc_A          172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE  251 (322)
T ss_dssp             ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH
T ss_pred             EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh
Confidence                                       9999999873     45568899999999999999999987654433211110


Q ss_pred             h-h-----hhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          113 A-W-----DLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       113 ~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                      . .     .............+.+............+.+++.+||+.||++|||+.||++.|+.+..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          252 EIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             HHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            0 0     00000001111122222222233366789999999999999999999999999998654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.96  E-value=6e-30  Score=210.64  Aligned_cols=165  Identities=14%  Similarity=0.151  Sum_probs=126.3

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec--C--------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD--S--------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~--~--------------   63 (216)
                      .||||||   +|.++.....+.+++.+++.++.|++.||+|||+++   |+||||||+|||++  .              
T Consensus       127 ~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~  203 (364)
T 3op5_A          127 RFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLVDYGLAYR  203 (364)
T ss_dssp             EEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESSCTTCEEECCCTTCEE
T ss_pred             EEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecCCCCeEEEEECCccee
Confidence            6899999   788775555577999999999999999999999998   99999999999997  2              


Q ss_pred             ----------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           64 ----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        64 ----------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                            .|+|||.+.+..++.++|||||||++|||++|..||........ ......... ...
T Consensus       204 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~-~~~~~~~~~-~~~  281 (364)
T 3op5_A          204 YCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK-YVRDSKIRY-REN  281 (364)
T ss_dssp             SSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH-HHHHHHHHH-HHC
T ss_pred             cccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH-HHHHHHHHh-hhh
Confidence                                  29999999999999999999999999999999999975332211 111111111 011


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                      +...+++.....    .++..+.+++..||+.+|++||++.+|++.|+.+.....
T Consensus       282 ~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~  332 (364)
T 3op5_A          282 IASLMDKCFPAA----NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG  332 (364)
T ss_dssp             HHHHHHHHSCTT----CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhcccc----cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence            122222222111    135678999999999999999999999999998655443

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.96  E-value=3.8e-30  Score=223.18  Aligned_cols=149  Identities=19%  Similarity=0.207  Sum_probs=116.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++.....+.+++.++..+++||+.||+|||+++   |+||||||+|||++.               
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~  305 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTA  305 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCE
T ss_pred             EEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeecccee
Confidence            5899999    555555555667999999999999999999999999   999999999999963               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||++.+..|+.++||||+||++|||++|..||.+......  ...    .....      .
T Consensus       306 ~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~--~~~----i~~~~------~  373 (573)
T 3uto_A          306 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET--LRN----VKSCD------W  373 (573)
T ss_dssp             ECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--HHH----HHTTC------C
T ss_pred             EccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--HHH----HHhCC------C
Confidence                           19999999999999999999999999999999999965432211  111    11110      0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ......+. ..+..+.+|+.+||+.||++||++.|++++
T Consensus       374 ~~~~~~~~-~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          374 NMDDSAFS-GISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             CCCSGGGT-TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCCccccc-CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            11111111 145678999999999999999999999873

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.96  E-value=2.4e-29  Score=200.93  Aligned_cols=160  Identities=16%  Similarity=0.130  Sum_probs=124.1

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|.++.......+++.++..++.|++.||+|||+++   |+||||||+||+++.                
T Consensus        81 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~  157 (298)
T 1csn_A           81 NVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGM  157 (298)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred             eEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence            5899999   788875555567999999999999999999999998   999999999999942                


Q ss_pred             -------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc-hhhhhhhhh
Q 040682           64 -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN-LLGHAWDLW  117 (216)
Q Consensus        64 -------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~-~~~~~~~~~  117 (216)
                                               .|+|||.+.+..++.++||||||+++|+|++|+.||......... .........
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  237 (298)
T 1csn_A          158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK  237 (298)
T ss_dssp             CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH
T ss_pred             ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhc
Confidence                                     299999999999999999999999999999999999765433221 111110000


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ..        +  ........++..+.+++.+||+.+|++||++.+|++.|+++....
T Consensus       238 ~~--------~--~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~  285 (298)
T 1csn_A          238 QS--------T--PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  285 (298)
T ss_dssp             HH--------S--CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             cC--------c--cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence            00        0  000011124567999999999999999999999999999875544

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=5.5e-30  Score=208.07  Aligned_cols=154  Identities=21%  Similarity=0.272  Sum_probs=121.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++.......+++.+++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        91 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~  167 (327)
T 3lzb_A           91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred             ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence            3678888    666665555667999999999999999999999998   999999999999964               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||.+.+..++.++|||||||++|++++ |..||........  ...    .....     
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~----~~~~~-----  236 (327)
T 3lzb_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--SSI----LEKGE-----  236 (327)
T ss_dssp             ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHH----HHTTC-----
T ss_pred             cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHH----HHcCC-----
Confidence                            2999999999999999999999999999999 9999864432221  111    11110     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ....     +..++..+.+++.+||+.+|.+||++.|+++.|+++...+
T Consensus       237 ~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  280 (327)
T 3lzb_A          237 RLPQ-----PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             CCCC-----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred             CCCC-----CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence            0000     1114456889999999999999999999999999875543

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.96  E-value=4.1e-29  Score=199.31  Aligned_cols=160  Identities=15%  Similarity=0.158  Sum_probs=123.3

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceee---cC-------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---DS-------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~---~~-------------   63 (216)
                      .++||||   +|.++.....+.+++.+++.++.|++.||+|||+++   |+||||||+||++   +.             
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~  156 (296)
T 4hgt_A           80 NVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             EEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             eEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence            5899999   777775555567999999999999999999999998   9999999999999   32             


Q ss_pred             -----------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhhhhhhcc
Q 040682           64 -----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHAWDLWKD  119 (216)
Q Consensus        64 -----------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~~~~~~~  119 (216)
                                             .|+|||.+.+..++.++|||||||++|++++|+.||........ ..........  
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--  234 (296)
T 4hgt_A          157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK--  234 (296)
T ss_dssp             ECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH--
T ss_pred             eccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccc--
Confidence                                   28999999999999999999999999999999999976543332 1111110000  


Q ss_pred             CccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          120 DRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                        .    ..  +........+..+.+++..||+.+|++||++.++++.|+++....
T Consensus       235 --~----~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~  282 (296)
T 4hgt_A          235 --M----ST--PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             --H----HS--CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             --c----cc--hhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence              0    00  000000113567999999999999999999999999999865443

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.96  E-value=7e-30  Score=207.30  Aligned_cols=155  Identities=25%  Similarity=0.360  Sum_probs=123.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.+++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  201 (325)
T 3kul_A          125 AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVL  201 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             cEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccccc
Confidence            5899999    777776556667999999999999999999999998   999999999999965               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||.+.+..++.++||||||+++|++++ |..||.......  ....    ....     
T Consensus       202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~----~~~~-----  270 (325)
T 3kul_A          202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISS----VEEG-----  270 (325)
T ss_dssp             C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHH----HHTT-----
T ss_pred             ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHHH----HHcC-----
Confidence                             1999999999999999999999999999999 999985432211  1111    1110     


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                      .....     +..++..+.+++..||+.+|++||++.+|++.|+.+.....
T Consensus       271 ~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~  316 (325)
T 3kul_A          271 YRLPA-----PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE  316 (325)
T ss_dssp             CCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred             CCCCC-----CCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence            00111     11245678999999999999999999999999998755443

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.96  E-value=1.2e-29  Score=205.72  Aligned_cols=154  Identities=23%  Similarity=0.275  Sum_probs=121.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++..++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        89 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  165 (325)
T 3kex_A           89 LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLL  165 (325)
T ss_dssp             EEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred             cEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCccccc
Confidence            4789999    666665555668999999999999999999999998   999999999999964               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||.+.+..++.++||||||+++|++++ |..||........  ...    .....     
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~----~~~~~-----  234 (325)
T 3kex_A          166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV--PDL----LEKGE-----  234 (325)
T ss_dssp             CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH--HHH----HHTTC-----
T ss_pred             CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH--HHH----HHcCC-----
Confidence                            2999999999999999999999999999999 9999865432221  111    11110     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ....+.     .+...+.+++.+||+.+|++||++.++++.|+.+....
T Consensus       235 ~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~  278 (325)
T 3kex_A          235 RLAQPQ-----ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP  278 (325)
T ss_dssp             BCCCCT-----TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred             CCCCCC-----cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            000000     13345788999999999999999999999999875543

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.96  E-value=1.4e-29  Score=205.63  Aligned_cols=153  Identities=21%  Similarity=0.298  Sum_probs=120.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.++.......+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~  167 (327)
T 3poz_A           91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred             eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEc
Confidence            3678888    677665566677999999999999999999999998   999999999999965               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||.+.+..++.++|||||||++||+++ |..||........  .    .......     
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~----~~~~~~~-----  236 (327)
T 3poz_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--S----SILEKGE-----  236 (327)
T ss_dssp             TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--H----HHHHTTC-----
T ss_pred             cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH--H----HHHHcCC-----
Confidence                            2999999999999999999999999999999 9999864332211  1    1111110     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                      ....     +..+...+.+++.+||+.+|++||++.|+++.|+.+...
T Consensus       237 ~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  279 (327)
T 3poz_A          237 RLPQ-----PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             CCCC-----CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred             CCCC-----CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence            0000     111445788999999999999999999999999886544

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.96  E-value=2.3e-29  Score=202.62  Aligned_cols=156  Identities=22%  Similarity=0.399  Sum_probs=123.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++.++..++.|++.||+|||+++   |+||||||+||+++.+              
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  158 (310)
T 3s95_A           82 LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLM  158 (310)
T ss_dssp             EEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEEC
T ss_pred             eEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceec
Confidence            5799999    777775555667999999999999999999999998   9999999999999751              


Q ss_pred             -----------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh
Q 040682           65 -----------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD  115 (216)
Q Consensus        65 -----------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~  115 (216)
                                                   |+|||.+.+..++.++||||||+++|++++|..|+................
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~  238 (310)
T 3s95_A          159 VDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG  238 (310)
T ss_dssp             C--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHH
T ss_pred             ccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhc
Confidence                                         899999999999999999999999999999999876443322211100000


Q ss_pred             hhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          116 LWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                               ..+...     +..++..+.+++.+||+.+|++||++.++++.|+.+...+
T Consensus       239 ---------~~~~~~-----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~  284 (310)
T 3s95_A          239 ---------FLDRYC-----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL  284 (310)
T ss_dssp             ---------HHHHTC-----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ---------cccccC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence                     000100     1114456889999999999999999999999999876554

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.96  E-value=1.1e-29  Score=204.86  Aligned_cols=158  Identities=23%  Similarity=0.298  Sum_probs=119.8

Q ss_pred             eeeeecc----cccccccCCC--CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK----LLDAANIDKK--RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      .++||||    +|.++.....  ..+++.+++.++.|++.||+|||+++ .+|+||||||+||+++.             
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~  187 (309)
T 3p86_A          109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSR  187 (309)
T ss_dssp             CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred             eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence            4899999    6666633322  24999999999999999999999975 45999999999999975             


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||.+.+..++.++||||||+++|++++|..||........  .....  ....      .
T Consensus       188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~--~~~~~--~~~~------~  257 (309)
T 3p86_A          188 LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV--VAAVG--FKCK------R  257 (309)
T ss_dssp             --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHH--HSCC------C
T ss_pred             cccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHH--hcCC------C
Confidence                            29999999999999999999999999999999999864332111  00000  0000      0


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                      ...     +...+..+.+++.+||+.+|.+||++.++++.|+.+.....
T Consensus       258 ~~~-----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~  301 (309)
T 3p86_A          258 LEI-----PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV  301 (309)
T ss_dssp             CCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred             CCC-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence            111     11145578999999999999999999999999998765543

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.96  E-value=1.1e-29  Score=209.82  Aligned_cols=154  Identities=24%  Similarity=0.367  Sum_probs=121.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.+++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  197 (373)
T 2qol_A          121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVL  197 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             eEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence            5899999    788876666667999999999999999999999998   999999999999975               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||.+.+..++.++||||||+++||+++ |..||.......  ..    ......     
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--~~----~~i~~~-----  266 (373)
T 2qol_A          198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--VI----KAVDEG-----  266 (373)
T ss_dssp             ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--HH----HHHHTT-----
T ss_pred             ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HH----HHHHcC-----
Confidence                             2999999999999999999999999999998 999985432111  11    111111     


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ....     .+..++..+.+++.+||+.+|++||++.+|++.|+++....
T Consensus       267 ~~~~-----~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  311 (373)
T 2qol_A          267 YRLP-----PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP  311 (373)
T ss_dssp             EECC-----CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred             CCCC-----CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence            0000     01124567899999999999999999999999999875543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.96  E-value=7.4e-29  Score=197.93  Aligned_cols=160  Identities=15%  Similarity=0.153  Sum_probs=123.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec---C-------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD---S-------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~---~-------------   63 (216)
                      .++||||   +|.++.....+.+++.+++.++.|++.||+|||+++   ++||||||+||+++   .             
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  156 (296)
T 3uzp_A           80 NVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             eEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence            5899999   777775545567999999999999999999999998   99999999999994   2             


Q ss_pred             -----------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhhhhhhcc
Q 040682           64 -----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHAWDLWKD  119 (216)
Q Consensus        64 -----------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~~~~~~~  119 (216)
                                             .|+|||.+.+..++.++||||||+++|+|++|+.||........ ..........  
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--  234 (296)
T 3uzp_A          157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK--  234 (296)
T ss_dssp             ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH--
T ss_pred             cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccc--
Confidence                                   29999999999999999999999999999999999976443322 1111111000  


Q ss_pred             CccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          120 DRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                        .    ...  ........+..+.+++.+||+.+|++||++.+|++.|+.+....
T Consensus       235 --~----~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          235 --M----STP--IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             --H----HSC--HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             --c----CCc--hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence              0    000  00001114567899999999999999999999999999875544

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.96  E-value=3e-30  Score=206.24  Aligned_cols=160  Identities=24%  Similarity=0.308  Sum_probs=121.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++.++..++.|++.||+|||+++   ++||||||+||+++.+              
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~  164 (295)
T 3ugc_A           88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL  164 (295)
T ss_dssp             CEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred             eEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence            4799999    777775555567999999999999999999999998   9999999999999641              


Q ss_pred             ------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc----------chhhhhhhh
Q 040682           65 ------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF----------NLLGHAWDL  116 (216)
Q Consensus        65 ------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~----------~~~~~~~~~  116 (216)
                                        |+|||.+.+..++.++||||||+++|++++|..|+........          .........
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (295)
T 3ugc_A          165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL  244 (295)
T ss_dssp             -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred             cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH
Confidence                              9999999999999999999999999999999988753221100          000000000


Q ss_pred             hccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          117 WKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ....     ...     ..+..++..+.+++.+||+.+|++|||+.|+++.|+.+...+
T Consensus       245 ~~~~-----~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          245 LKNN-----GRL-----PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             HHTT-----CCC-----CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             Hhcc-----CcC-----CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            0000     000     111125567999999999999999999999999999875544

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.96  E-value=1.6e-30  Score=210.90  Aligned_cols=170  Identities=24%  Similarity=0.292  Sum_probs=119.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++.+++.++.|++.||+|||+++   ++|+||||+||+++.+              
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  177 (327)
T 3lxl_A          101 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLL  177 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred             EEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceec
Confidence            5799999    777775554567999999999999999999999998   9999999999999541              


Q ss_pred             ------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 ------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 ------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                        |+|||.+.+..++.++||||||+++|+|++|..||..........................+
T Consensus       178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (327)
T 3lxl_A          178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL  257 (327)
T ss_dssp             CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred             ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence                              99999999999999999999999999999999987533211000000000000000000000


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                      ...... ..+..++..+.+++.+||+.+|++||++.|+++.|+.+.....
T Consensus       258 ~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  306 (327)
T 3lxl_A          258 EEGQRL-PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR  306 (327)
T ss_dssp             HTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred             hcccCC-CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence            000000 1111255678999999999999999999999999998765543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2.2e-28  Score=198.57  Aligned_cols=162  Identities=22%  Similarity=0.231  Sum_probs=119.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcC--------CCCCeecCCCCCCceeecC-------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQY--------SRLRIIHRDLKASNILLDS-------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~--------~~~~iiH~dik~~nil~~~-------   63 (216)
                      .|+||||    +|.++..  ...+++.+++.++.|++.||+|||++        +   |+||||||+||+++.       
T Consensus       110 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kl~  184 (337)
T 3mdy_A          110 LYLITDYHENGSLYDYLK--STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA---IAHRDLKSKNILVKKNGTCCIA  184 (337)
T ss_dssp             EEEEECCCTTCBHHHHHH--HCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC---EECSCCCGGGEEECTTSCEEEC
T ss_pred             eEEEEeccCCCcHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---EEecccchHHEEECCCCCEEEE
Confidence            5899999    6666642  34699999999999999999999998        7   999999999999964       


Q ss_pred             --------------------------CCCChhhhhcCCCCcc------hhhhhHHHHHHHHHhC----------CCCCCc
Q 040682           64 --------------------------GYMPPEYALRGFFSIK------SDVFSFGVLMLEILSG----------KKSTAV  101 (216)
Q Consensus        64 --------------------------~y~aPE~~~~~~~~~~------~Dv~s~G~~l~ell~g----------~~~~~~  101 (216)
                                                .|+|||++.+......      +|||||||++|||++|          +.||..
T Consensus       185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~  264 (337)
T 3mdy_A          185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD  264 (337)
T ss_dssp             CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence                                      1999999988766655      9999999999999999          444433


Q ss_pred             CCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          102 YNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                      .......... .....    ......+..+.......++.++.+++.+||+.+|++||++.||++.|+++...
T Consensus       265 ~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          265 LVPSDPSYED-MREIV----CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             TSCSSCCHHH-HHHHH----TTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             hcCCCCchhh-hHHHH----hhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence            2222211111 11111    11112233332223334788899999999999999999999999999986443

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.96  E-value=2.2e-28  Score=196.39  Aligned_cols=163  Identities=31%  Similarity=0.502  Sum_probs=122.6

Q ss_pred             eeeeecc----ccccccc--CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK----LLDAANI--DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      .++||||    +|.++..  .....+++..+..++.|++.||+|||+++   ++|+||||+||+++.             
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~  181 (307)
T 2nru_A          105 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLAR  181 (307)
T ss_dssp             CEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             eEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEcCCCcEEEeeccccc
Confidence            4799999    6666532  33456999999999999999999999998   999999999999975             


Q ss_pred             ------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhh-ccCcccc
Q 040682           64 ------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW-KDDRVHE  124 (216)
Q Consensus        64 ------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  124 (216)
                                        .|+|||.+.+ .++.++||||||+++|+|++|..||........ ......... ....+..
T Consensus       182 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~  259 (307)
T 2nru_A          182 ASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLDIKEEIEDEEKTIED  259 (307)
T ss_dssp             ECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TTHHHHHHHTTSCCHHH
T ss_pred             ccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HHHHHHHhhhhhhhhhh
Confidence                              2899998765 578999999999999999999999876544332 111111111 1111222


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      .++....  ..+......+.+++.+||+.+|.+||++.+|++.|+++.
T Consensus       260 ~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          260 YIDKKMN--DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HSCSSCS--CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             hcccccc--ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            2333222  123336788999999999999999999999999999763

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.96  E-value=2.9e-28  Score=196.15  Aligned_cols=163  Identities=23%  Similarity=0.346  Sum_probs=122.1

Q ss_pred             eeeeecc----cccccccCCC--CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK----LLDAANIDKK--RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      .++||||    +|.++.....  ..+++..++.++.|++.||+|||+.+..+|+||||||+||+++.             
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~  153 (307)
T 2eva_A           74 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA  153 (307)
T ss_dssp             TEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-
T ss_pred             cEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccc
Confidence            3799999    7777643332  24789999999999999999999932223999999999999864             


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++||||||+++|+|++|+.||.........   ..+......      .+.
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~~~------~~~  224 (307)
T 2eva_A          154 CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR---IMWAVHNGT------RPP  224 (307)
T ss_dssp             -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH---HHHHHHTTC------CCC
T ss_pred             cccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH---HHHHHhcCC------CCC
Confidence                          299999999999999999999999999999999998643322111   111111000      011


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccccCcc
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLK  179 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~~~~  179 (216)
                      ..     ...+..+.+++.+||+.+|++||++.++++.|+.+....+...
T Consensus       225 ~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~  269 (307)
T 2eva_A          225 LI-----KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD  269 (307)
T ss_dssp             CB-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTT
T ss_pred             cc-----cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCC
Confidence            11     1144568899999999999999999999999998876665433

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.96  E-value=3.9e-29  Score=204.36  Aligned_cols=161  Identities=16%  Similarity=0.152  Sum_probs=120.6

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   +|.++.... +.+++.+++.++.|++.||+|||+++   |+||||||+||+++.                
T Consensus       127 ~~lv~e~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~  202 (345)
T 2v62_A          127 RFMVMERLGIDLQKISGQN-GTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVYLADYGLSYR  202 (345)
T ss_dssp             EEEEEECEEEEHHHHCBGG-GBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTTSEEECCCTTCEE
T ss_pred             EEEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCCcEEEEeCCCcee
Confidence            5899999   777774433 37999999999999999999999998   999999999999953                


Q ss_pred             ----------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           64 ----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        64 ----------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                            .|+|||++.+..++.++|||||||++|||++|..||................ ... .
T Consensus       203 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~-~~~-~  280 (345)
T 2v62_A          203 YCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTN-LLD-E  280 (345)
T ss_dssp             SSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHH-HHH-T
T ss_pred             cccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHh-hcc-c
Confidence                                  2999999999999999999999999999999999986432222111111000 000 0


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                      +...+.....    ....+..+.+++..||+.+|++||++.+|++.|+....
T Consensus       281 ~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          281 LPQSVLKWAP----SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             TTHHHHHHSC----TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             ccHHHHhhcc----ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence            0000000000    00245679999999999999999999999999998644

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.96  E-value=3.6e-29  Score=206.62  Aligned_cols=151  Identities=24%  Similarity=0.331  Sum_probs=118.5

Q ss_pred             eeeeecc----cccccccCC---------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDK---------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+||||    +|.++....               ...+++.+++.++.|++.||+|||+++   |+||||||+|||++.
T Consensus       162 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~  238 (370)
T 2psq_A          162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTE  238 (370)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECT
T ss_pred             EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEECC
Confidence            5899999    676663322               245899999999999999999999998   999999999999965


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~  111 (216)
                                                     .|+|||++.+..++.++|||||||++|||++ |..||.......  .. 
T Consensus       239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--~~-  315 (370)
T 2psq_A          239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LF-  315 (370)
T ss_dssp             TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HH-
T ss_pred             CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--HH-
Confidence                                           1999999999999999999999999999999 999986433211  11 


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                         .......     .+..     +..++..+.+++.+||+.+|++||++.|+++.|+++.
T Consensus       316 ---~~~~~~~-----~~~~-----~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il  363 (370)
T 2psq_A          316 ---KLLKEGH-----RMDK-----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  363 (370)
T ss_dssp             ---HHHHTTC-----CCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---HHHhcCC-----CCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence               1111110     0111     1124567899999999999999999999999999864

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.95  E-value=3.1e-29  Score=218.39  Aligned_cols=146  Identities=21%  Similarity=0.190  Sum_probs=111.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      -||||||    +|.+++ ...+.+++..++.++.||+.||+|||+++   ||||||||+|||++.+              
T Consensus       267 lylVmEy~~GGdL~~~l-~~~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~  342 (689)
T 3v5w_A          267 LSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF  342 (689)
T ss_dssp             EEEEECCCCSCBHHHHH-HHHCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeec
Confidence            4899999    555543 33457999999999999999999999999   9999999999999762              


Q ss_pred             -------------CCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           65 -------------YMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        65 -------------y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                   |+|||++.+ ..|+.++|+||+||++|||++|..||.........  .. .......      ....
T Consensus       343 ~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~--~i-~~~i~~~------~~~~  413 (689)
T 3v5w_A          343 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EI-DRMTLTM------AVEL  413 (689)
T ss_dssp             SSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH--HH-HHHHHHC------CCCC
T ss_pred             CCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH--HH-HHhhcCC------CCCC
Confidence                         999999975 57999999999999999999999999654332211  10 0000000      0111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPT-----MSDVVS  166 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~  166 (216)
                           +...+.++.+|+.+||+.||++|++     +.||++
T Consensus       414 -----p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          414 -----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             -----CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             -----CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence                 1124567899999999999999998     567664

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.95  E-value=1.3e-29  Score=209.73  Aligned_cols=151  Identities=21%  Similarity=0.255  Sum_probs=119.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.++..++.|++.||+|||+++   ++||||||+|||++.               
T Consensus       187 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~  263 (377)
T 3cbl_A          187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREE  263 (377)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceec
Confidence            4899999    666665555556999999999999999999999999   999999999999975               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||.+.+..++.++|||||||++||+++ |..||.......      .........     
T Consensus       264 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~------~~~~~~~~~-----  332 (377)
T 3cbl_A          264 ADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ------TREFVEKGG-----  332 (377)
T ss_dssp             TTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH------HHHHHHTTC-----
T ss_pred             CCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCC-----
Confidence                            1999999999999999999999999999998 888885432211      111111110     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      ....     +..++..+.+++.+||+.+|++|||+.+|++.|+.+.
T Consensus       333 ~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          333 RLPC-----PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             CCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCC-----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            0001     1114557899999999999999999999999998764

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.95  E-value=7.1e-29  Score=195.41  Aligned_cols=154  Identities=18%  Similarity=0.298  Sum_probs=117.7

Q ss_pred             eeeeecc----cccccccCCC-CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAANIDKK-RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      .++||||    +|.++..... ..+++.+++.++.|++.||+|||+++ .+++|+||||+||+++.+             
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~  162 (271)
T 3kmu_A           84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFS  162 (271)
T ss_dssp             CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred             eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceee
Confidence            4899999    7777744433 36999999999999999999999864 569999999999999862             


Q ss_pred             -----------CCChhhhhcCCCCc---chhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           65 -----------YMPPEYALRGFFSI---KSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        65 -----------y~aPE~~~~~~~~~---~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                 |+|||.+.+..++.   ++||||||+++|++++|+.||........     .......     ...+..
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----~~~~~~~-----~~~~~~  232 (271)
T 3kmu_A          163 FQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-----GMKVALE-----GLRPTI  232 (271)
T ss_dssp             TSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-----HHHHHHS-----CCCCCC
T ss_pred             ecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-----HHHHHhc-----CCCCCC
Confidence                       99999998765444   79999999999999999999864322111     0010101     011111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      +     ...+..+.+++..||+.+|++||++.++++.|+++.
T Consensus       233 ~-----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          233 P-----PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             C-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             C-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            1     114557899999999999999999999999999764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.95  E-value=1.1e-28  Score=196.91  Aligned_cols=157  Identities=24%  Similarity=0.386  Sum_probs=118.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++.+++.++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  170 (289)
T 3og7_A           94 LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEK  170 (289)
T ss_dssp             CEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred             cEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccc
Confidence            4799999    676665566677999999999999999999999998   999999999999964               


Q ss_pred             ----------------CCCChhhhh---cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 ----------------GYMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 ----------------~y~aPE~~~---~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                      .|+|||.+.   +..++.++||||||+++|++++|..||........     ........... 
T Consensus       171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----~~~~~~~~~~~-  244 (289)
T 3og7_A          171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-----IIEMVGRGSLS-  244 (289)
T ss_dssp             -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-----HHHHHHHTSCC-
T ss_pred             ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-----HHHHhcccccC-
Confidence                            299999986   56788999999999999999999999864332211     11111111111 


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                         +...  .....++..+.+++.+||+.+|++||++.++++.|+++..
T Consensus       245 ---~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          245 ---PDLS--KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             ---CCTT--SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             ---cchh--hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence               1111  0111245679999999999999999999999999998643

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.95  E-value=3.3e-29  Score=206.68  Aligned_cols=153  Identities=9%  Similarity=0.077  Sum_probs=113.2

Q ss_pred             eeeeecc---cccccccCCCCCCChHHH------HHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVR------ARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------   64 (216)
                      .||||||   +|.++.......+.+..+      ..++.|++.||+|||+++   |+||||||+|||++.+         
T Consensus       163 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DFG  239 (371)
T 3q60_A          163 YLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHGHFTPDNLFIMPDGRLMLGDVS  239 (371)
T ss_dssp             EEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEECTTSCEEECCGG
T ss_pred             EEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---CccCcCCHHHEEECCCCCEEEEecc
Confidence            5999999   777775444445666666      788899999999999998   9999999999999762         


Q ss_pred             -----------------CCChhhhhc--CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           65 -----------------YMPPEYALR--GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        65 -----------------y~aPE~~~~--~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       |+|||++.+  ..++.++|||||||++|||++|+.||..........       +........
T Consensus       240 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~-------~~~~~~~~~  312 (371)
T 3q60_A          240 ALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS-------WKRPSLRVP  312 (371)
T ss_dssp             GEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTC-------CCBCCTTSC
T ss_pred             eeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccc-------hhhhhhhhc
Confidence                             999999987  679999999999999999999999997654332110       000000000


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ........... ..+..+.+++.+||+.||++||++.++++
T Consensus       313 ~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          313 GTDSLAFGSCT-PLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             CCCSCCCTTSS-CCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             cccccchhhcc-CCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            00011001011 14567899999999999999999999874

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.95  E-value=2.2e-28  Score=194.66  Aligned_cols=155  Identities=28%  Similarity=0.470  Sum_probs=118.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.+........+++.+++.++.|++.||+|||+++ .+++|+||||+||+++.               
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg  174 (287)
T 4f0f_A           96 PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG  174 (287)
T ss_dssp             TEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred             CeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence            3689999    565555556667999999999999999999999975 45999999999999853               


Q ss_pred             ----------------CCCChhhhh--cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 ----------------GYMPPEYAL--RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 ----------------~y~aPE~~~--~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                      .|+|||.+.  +..++.++||||||+++|+|++|..||................    .    .
T Consensus       175 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~----~----~  246 (287)
T 4f0f_A          175 LSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE----E----G  246 (287)
T ss_dssp             TCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHH----S----C
T ss_pred             ccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhc----c----C
Confidence                            299999984  4467899999999999999999999986544332211111111    0    0


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ..+...     ..++..+.+++.+||+.+|++||++.|+++.|+++
T Consensus       247 ~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          247 LRPTIP-----EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             CCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             CCCCCC-----cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            111111     11456789999999999999999999999999863

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.95  E-value=1.5e-29  Score=201.49  Aligned_cols=152  Identities=19%  Similarity=0.290  Sum_probs=115.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++.+++.++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~  163 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLS  163 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred             CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeec
Confidence            4799999    777775555556999999999999999999999998   999999999999843               


Q ss_pred             ------------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 ------------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 ------------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                        .|+|||.+.+ ..++.++||||||+++|+|++|..++........ .    .......    
T Consensus       164 Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-~----~~~~~~~----  234 (289)
T 4fvq_A          164 DPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-K----LQFYEDR----  234 (289)
T ss_dssp             CCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-H----HHHHHTT----
T ss_pred             cCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-H----HHHhhcc----
Confidence                              2999999987 6799999999999999999996655432221110 0    0000000    


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                         ...+..     .+..+.+++.+||+.+|++|||+.++++.|+.+...
T Consensus       235 ---~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          235 ---HQLPAP-----KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             ---CCCCCC-----SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             ---CCCCCC-----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence               001111     234578999999999999999999999999987443

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.8e-28  Score=200.92  Aligned_cols=165  Identities=18%  Similarity=0.164  Sum_probs=124.7

Q ss_pred             eeeeecc---cccccccCC-CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK---LLDAANIDK-KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||   +|.++.... ...+++.+++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus       133 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~  209 (352)
T 2jii_A          133 RFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPEDQSQVTLAGYGFAF  209 (352)
T ss_dssp             EEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEETTEEEEEEECCGGGCB
T ss_pred             EEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcCCCCceEEEecCccee
Confidence            5899999   787774433 467999999999999999999999998   999999999999964               


Q ss_pred             -----------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccC
Q 040682           64 -----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDD  120 (216)
Q Consensus        64 -----------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~  120 (216)
                                             .|+|||.+.+..++.++||||||+++|+|++|..||..................  .
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~--~  287 (352)
T 2jii_A          210 RYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFV--D  287 (352)
T ss_dssp             CSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHH--H
T ss_pred             eccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhcc--C
Confidence                                   289999999989999999999999999999999998755432221111111110  0


Q ss_pred             ccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          121 RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                      ..............    .+..+.+++.+||+.+|++||++.+|++.|+++.....
T Consensus       288 ~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          288 KPGPFVGPCGHWIR----PSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             SCCCEECTTSCEEC----CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             ChhhhhhhccccCC----CcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence            01111111111011    34678999999999999999999999999998755543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.95  E-value=2.2e-28  Score=197.28  Aligned_cols=159  Identities=19%  Similarity=0.244  Sum_probs=116.2

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      +.++||||   ++.+........+++.+++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        93 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~  169 (311)
T 3niz_A           93 CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAF  169 (311)
T ss_dssp             CEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEET
T ss_pred             EEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceec
Confidence            35899999   565555555667999999999999999999999998   999999999999965               


Q ss_pred             --------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccC---ccc--
Q 040682           64 --------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDD---RVH--  123 (216)
Q Consensus        64 --------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--  123 (216)
                                    .|+|||++.+ ..++.++||||+||++|+|++|..||........  ...........   ...  
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~  247 (311)
T 3niz_A          170 GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ--LPKIFSILGTPNPREWPQV  247 (311)
T ss_dssp             TSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH--HHHHHHHHCCCCTTTSGGG
T ss_pred             CCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHHCCCChHHhhhh
Confidence                          2999999886 4689999999999999999999999976554332  11111111000   000  


Q ss_pred             -----------cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          124 -----------ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       124 -----------~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                                 ....... ..........++.+++.+||+.||++|||+.|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          248 QELPLWKQRTFQVFEKKP-WSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             TTSHHHHSCCCCCCCCCC-HHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hccchhhhcccccccCCc-HHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                       0000000 00011113457899999999999999999999986

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.95  E-value=3.8e-28  Score=197.25  Aligned_cols=158  Identities=14%  Similarity=0.151  Sum_probs=121.4

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|.++.....+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.                
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~  156 (330)
T 2izr_A           80 NAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFAL  156 (330)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred             cEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence            5899999   777775544667999999999999999999999998   999999999999853                


Q ss_pred             -------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhhhhhh
Q 040682           64 -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHAWDLW  117 (216)
Q Consensus        64 -------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~~~~~  117 (216)
                                               .|+|||++.+..++.++|||||||++|||++|..||........ ........  
T Consensus       157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~--  234 (330)
T 2izr_A          157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD--  234 (330)
T ss_dssp             CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHH--
T ss_pred             ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHh--
Confidence                                     29999999999999999999999999999999999976543322 11111000  


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                        ...     + ..........+ .+.+++..||+.+|.+||++.+|++.|+++...
T Consensus       235 --~~~-----~-~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~  282 (330)
T 2izr_A          235 --TKR-----A-TPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR  282 (330)
T ss_dssp             --HHH-----H-SCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             --hhc-----c-CCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence              000     0 00000001123 799999999999999999999999999865443

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.95  E-value=5.5e-29  Score=197.71  Aligned_cols=151  Identities=23%  Similarity=0.279  Sum_probs=119.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.++..++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (281)
T 1mp8_A           90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM  166 (281)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             cEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECcccccccc
Confidence            4799999    677765555567999999999999999999999998   999999999999974               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|+|||.+.+..++.++||||||+++||+++ |..||........  ...    ......     
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~--~~~----i~~~~~-----  235 (281)
T 1mp8_A          167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGR----IENGER-----  235 (281)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHH----HHTTCC-----
T ss_pred             CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH--HHH----HHcCCC-----
Confidence                           2999999999999999999999999999996 8889864432211  111    111100     


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      ...     +..++..+.+++.+||+.+|++||++.++++.|+.+.
T Consensus       236 ~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          236 LPM-----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            001     1114567889999999999999999999999998753

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.95  E-value=9.2e-30  Score=205.84  Aligned_cols=168  Identities=26%  Similarity=0.304  Sum_probs=120.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++...  ..+++.+++.++.|++.||+|||+++   ++|+||||+||+++.+              
T Consensus       110 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  184 (318)
T 3lxp_A          110 LQLVMEYVPLGSLRDYLPR--HSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAV  184 (318)
T ss_dssp             EEEEECCCTTCBHHHHGGG--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             EEEEEecccCCcHHHHHhh--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccccc
Confidence            4799999    66666433  34999999999999999999999998   9999999999999751              


Q ss_pred             ------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 ------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 ------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                        |+|||.+.+..++.++||||||+++|+|++|..||......................+...+
T Consensus       185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (318)
T 3lxp_A          185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL  264 (318)
T ss_dssp             CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred             cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHH
Confidence                              89999999999999999999999999999999987532211100000000000000001111


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                      ...... ..+..++..+.+++.+||+.+|++||++.|+++.|+.+.....
T Consensus       265 ~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  313 (318)
T 3lxp_A          265 ERGERL-PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ  313 (318)
T ss_dssp             HTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             hcccCC-CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence            111000 1111255679999999999999999999999999998765553

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.95  E-value=7.7e-29  Score=199.88  Aligned_cols=142  Identities=20%  Similarity=0.244  Sum_probs=111.6

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|.++.......+++.+++.++.|++.||+|||+++   |+||||||+|||++.                
T Consensus       132 ~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~  208 (311)
T 3p1a_A          132 LYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELG  208 (311)
T ss_dssp             EEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred             EEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence            5899999   666665555567999999999999999999999998   999999999999964                


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccc
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVIT  131 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (216)
                                  .|+|||++.+ .++.++|||||||++|||++|..++.....         +.......        . 
T Consensus       209 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---------~~~~~~~~--------~-  269 (311)
T 3p1a_A          209 TAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---------WQQLRQGY--------L-  269 (311)
T ss_dssp             ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---------HHHHTTTC--------C-
T ss_pred             cCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---------HHHHhccC--------C-
Confidence                        2999998876 789999999999999999999776532110         11111110        1 


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ....+...+..+.+++.+||+.+|++||++.|+++
T Consensus       270 ~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          270 PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            11112224567999999999999999999999886

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.1e-28  Score=204.05  Aligned_cols=155  Identities=26%  Similarity=0.264  Sum_probs=122.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++.++..++.|++.||+|||+++   |+||||||+||+++.+              
T Consensus       166 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~  242 (373)
T 3c1x_A          166 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM  242 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             eEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeeccccccc
Confidence            4799999    777776666667899999999999999999999998   9999999999999751              


Q ss_pred             -------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           65 -------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        65 -------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                         |+|||.+.+..++.++||||||+++|||++ |.+||........  ....    ....   
T Consensus       243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~--~~~~----~~~~---  313 (373)
T 3c1x_A          243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--TVYL----LQGR---  313 (373)
T ss_dssp             ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH--HHHH----HTTC---
T ss_pred             cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH--HHHH----HcCC---
Confidence                               999999999999999999999999999999 5666654332221  1111    0110   


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                        ....     +..++..+.+++.+||+.+|++||++.|+++.|+.+...+.
T Consensus       314 --~~~~-----p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          314 --RLLQ-----PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             --CCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             --CCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence              0000     11144578999999999999999999999999998765554

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=8.5e-29  Score=201.51  Aligned_cols=155  Identities=25%  Similarity=0.375  Sum_probs=122.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++.+++.++.|++.||+|||+++   ++||||||+||+++.+              
T Consensus       121 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  197 (333)
T 1mqb_A          121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVL  197 (333)
T ss_dssp             EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhh
Confidence            5899999    777775555667999999999999999999999998   9999999999999751              


Q ss_pred             ------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           65 ------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        65 ------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                        |+|||.+.+..++.++||||||+++||+++ |..||.......  .    .......     
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~----~~~~~~~-----  266 (333)
T 1mqb_A          198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--V----MKAINDG-----  266 (333)
T ss_dssp             -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--H----HHHHHTT-----
T ss_pred             ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--H----HHHHHCC-----
Confidence                              999999999999999999999999999998 999985432111  1    1111111     


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                      .....     +..++..+.+++.+||+.+|++||++.++++.|+++.....
T Consensus       267 ~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  312 (333)
T 1mqb_A          267 FRLPT-----PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  312 (333)
T ss_dssp             CCCCC-----CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             CcCCC-----cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence            00001     11145678999999999999999999999999998755544

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=7.6e-29  Score=195.63  Aligned_cols=151  Identities=25%  Similarity=0.340  Sum_probs=120.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++.+++.++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  156 (269)
T 4hcu_A           80 ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV  156 (269)
T ss_dssp             EEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred             eEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccc
Confidence            5899999    677776666677999999999999999999999998   999999999999964               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|+|||.+.+..++.++||||+|+++|++++ |..||.......  ....    ....     ..
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~--~~~~----~~~~-----~~  225 (269)
T 4hcu_A          157 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVED----ISTG-----FR  225 (269)
T ss_dssp             CCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHH----HHTT-----CC
T ss_pred             cccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH--HHHH----HhcC-----cc
Confidence                           1999999999999999999999999999999 888885432211  1111    1110     01


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      ...+     ...+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       226 ~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~  265 (269)
T 4hcu_A          226 LYKP-----RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  265 (269)
T ss_dssp             CCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCC-----CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence            1111     113456899999999999999999999999998764

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.95  E-value=5.9e-29  Score=196.04  Aligned_cols=152  Identities=26%  Similarity=0.331  Sum_probs=119.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++.+++.++.|++.||+|||+++   ++|+||||+||+++.+              
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~  154 (268)
T 3sxs_A           78 IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYV  154 (268)
T ss_dssp             EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEEC
T ss_pred             eEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceec
Confidence            5899999    677775555567999999999999999999999998   9999999999999651              


Q ss_pred             ----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           65 ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        65 ----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      |+|||.+.+..++.++||||||+++|++++ |..||........  ...    .....  ....
T Consensus       155 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~----~~~~~--~~~~  226 (268)
T 3sxs_A          155 LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV--VLK----VSQGH--RLYR  226 (268)
T ss_dssp             CTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HHH----HHTTC--CCCC
T ss_pred             chhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH--HHH----HHcCC--CCCC
Confidence                            999999999899999999999999999999 9999854332111  000    00000  0000


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                      +    ..    .+..+.+++..||+.+|++|||+.++++.|+.+..
T Consensus       227 ~----~~----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          227 P----HL----ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             C----TT----SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             C----Cc----ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            1    11    34568899999999999999999999999998754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.95  E-value=1.2e-28  Score=208.31  Aligned_cols=151  Identities=23%  Similarity=0.268  Sum_probs=119.7

Q ss_pred             eeeeecc----cccccccCC-CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDK-KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++.... ...+++.+++.++.|++.||+|||+++   ++||||||+|||++.              
T Consensus       262 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~  338 (450)
T 1k9a_A          262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKE  338 (450)
T ss_dssp             EEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             eEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccc
Confidence            5899999    777774433 334799999999999999999999998   999999999999975              


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                  .|+|||.+.+..++.++||||||+++|||++ |..||........  ...    ...+     .....
T Consensus       339 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--~~~----i~~~-----~~~~~  407 (450)
T 1k9a_A          339 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPR----VEKG-----YKMDA  407 (450)
T ss_dssp             CC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH--HHH----HHTT-----CCCCC
T ss_pred             ccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH----HHcC-----CCCCC
Confidence                        2999999999999999999999999999998 9999865432221  111    1111     01111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                           +..++..+.+++.+||+.+|++||++.++++.|+.+.
T Consensus       408 -----p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~  444 (450)
T 1k9a_A          408 -----PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR  444 (450)
T ss_dssp             -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -----CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence                 1125567899999999999999999999999998764

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.95  E-value=2.5e-28  Score=207.94  Aligned_cols=156  Identities=18%  Similarity=0.228  Sum_probs=121.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec---C-------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD---S-------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~---~-------------   63 (216)
                      .+|||||   +|.++.....+.+++.+++.++.||+.||+|||+++   |+||||||+|||++   .             
T Consensus        78 ~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~  154 (483)
T 3sv0_A           78 NVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK  154 (483)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             EEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence            5899999   787775555667999999999999999999999998   99999999999993   1             


Q ss_pred             -----------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhhhhhhcc
Q 040682           64 -----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHAWDLWKD  119 (216)
Q Consensus        64 -----------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~~~~~~~  119 (216)
                                             .|+|||.+.+..++.++|||||||++|||++|..||........ .......    .
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~----~  230 (483)
T 3sv0_A          155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS----E  230 (483)
T ss_dssp             ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHH----H
T ss_pred             eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHh----h
Confidence                                   29999999999999999999999999999999999976544322 1111110    0


Q ss_pred             CccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          120 DRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ......+      ......++.++.+++..||+.+|++||++.+|++.|+++
T Consensus       231 ~~~~~~~------~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          231 KKVATSI------EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HHHHSCH------HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             ccccccH------HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            0000000      001111456799999999999999999999999998875

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.95  E-value=1e-28  Score=196.11  Aligned_cols=150  Identities=25%  Similarity=0.344  Sum_probs=119.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++.+++.++.|++.||+|||+++   ++|+||||+||+++.+              
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  170 (283)
T 3gen_A           94 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYV  170 (283)
T ss_dssp             EEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGB
T ss_pred             eEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccc
Confidence            5899999    677775555567999999999999999999999998   9999999999999751              


Q ss_pred             ----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           65 ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        65 ----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      |+|||.+.+..++.++||||||+++|++++ |..||........  ...    ....     ..
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~--~~~----~~~~-----~~  239 (283)
T 3gen_A          171 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET--AEH----IAQG-----LR  239 (283)
T ss_dssp             CCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HHH----HHTT-----CC
T ss_pred             cccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH--HHH----Hhcc-----cC
Confidence                            999999999999999999999999999998 9999864332111  111    1010     01


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ...+     ...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus       240 ~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~  278 (283)
T 3gen_A          240 LYRP-----HLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  278 (283)
T ss_dssp             CCCC-----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCC-----CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            1111     11345688999999999999999999999999875

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.95  E-value=5.3e-28  Score=200.28  Aligned_cols=161  Identities=20%  Similarity=0.258  Sum_probs=117.2

Q ss_pred             eeeeecc---cc-cccccCCCCCCChHHHHHHHHHHHHHHHhhhcC-CCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK---LL-DAANIDKKRLLDWQVRARIIEGIAQGLLYLHQY-SRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l-~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .+|||||   ++ +.+.....+.+++.+++.++.|++.||+|||++ +   |+||||||+|||++.              
T Consensus       120 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~~~~~~~  196 (397)
T 1wak_A          120 ICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRLAAEATE  196 (397)
T ss_dssp             EEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHHHHHHC-
T ss_pred             EEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhhhhhhHH
Confidence            5899999   33 333444446799999999999999999999998 8   999999999999951              


Q ss_pred             -------------------------------------------------------------CCCChhhhhcCCCCcchhh
Q 040682           64 -------------------------------------------------------------GYMPPEYALRGFFSIKSDV   82 (216)
Q Consensus        64 -------------------------------------------------------------~y~aPE~~~~~~~~~~~Dv   82 (216)
                                                                                   .|+|||++.+..++.++||
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  276 (397)
T 1wak_A          197 WQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADI  276 (397)
T ss_dssp             --------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHH
T ss_pred             HhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHH
Confidence                                                                         2999999999999999999


Q ss_pred             hhHHHHHHHHHhCCCCCCcCCCCccc----hhhhhhhhhc------------------c-Cccccccccc--------cc
Q 040682           83 FSFGVLMLEILSGKKSTAVYNTGSFN----LLGHAWDLWK------------------D-DRVHELIDPV--------IT  131 (216)
Q Consensus        83 ~s~G~~l~ell~g~~~~~~~~~~~~~----~~~~~~~~~~------------------~-~~~~~~~~~~--------~~  131 (216)
                      |||||++|||++|..||.........    ..........                  . .......+..        ..
T Consensus       277 wslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (397)
T 1wak_A          277 WSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVE  356 (397)
T ss_dssp             HHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhh
Confidence            99999999999999999765543321    0111100000                  0 0000000000        00


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ....+......+.+|+.+||+.||++|||+.|+++
T Consensus       357 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          357 KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             TSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             hcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence            01223446788999999999999999999999985

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.95  E-value=8.5e-29  Score=202.88  Aligned_cols=133  Identities=29%  Similarity=0.386  Sum_probs=106.4

Q ss_pred             CChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------------------------CCCChhh
Q 040682           22 LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------------------------GYMPPEY   70 (216)
Q Consensus        22 l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------------------------~y~aPE~   70 (216)
                      +++.+++.++.|++.||+|||+++   |+||||||+||+++.                               .|+|||+
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~  266 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET  266 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhh
Confidence            899999999999999999999998   999999999999964                               1999999


Q ss_pred             hhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHh
Q 040682           71 ALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALL  149 (216)
Q Consensus        71 ~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  149 (216)
                      +.+..++.++||||||+++|||++ |..||........ .    ........     ....+     ...+..+.+++.+
T Consensus       267 ~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~----~~~~~~~~-----~~~~~-----~~~~~~l~~li~~  331 (359)
T 3vhe_A          267 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-F----CRRLKEGT-----RMRAP-----DYTTPEMYQTMLD  331 (359)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-H----HHHHHHTC-----CCCCC-----TTCCHHHHHHHHH
T ss_pred             hcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-H----HHHHHcCC-----CCCCC-----CCCCHHHHHHHHH
Confidence            999999999999999999999998 9999865432221 1    11111110     01111     1144568999999


Q ss_pred             ccccCCCCCCCHHHHHHHHcccc
Q 040682          150 CVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       150 cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      ||+.+|++||++.|++++|+++.
T Consensus       332 ~l~~dP~~Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          332 CWHGEPSQRPTFSELVEHLGNLL  354 (359)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HccCChhhCCCHHHHHHHHHHHH
Confidence            99999999999999999999763

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.95  E-value=8.2e-29  Score=198.59  Aligned_cols=146  Identities=22%  Similarity=0.327  Sum_probs=113.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++...  ..+++.++..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        92 ~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (297)
T 3fxz_A           92 LWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI  166 (297)
T ss_dssp             EEEEEECCTTCBHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEECCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceec
Confidence            5899999    66666332  35899999999999999999999998   999999999999974               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++|||||||++|+|++|..||........     ........      .+.
T Consensus       167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-----~~~~~~~~------~~~  235 (297)
T 3fxz_A          167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-----LYLIATNG------TPE  235 (297)
T ss_dssp             CSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----HHHHHHHC------SCC
T ss_pred             CCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhCC------CCC
Confidence                          19999999999999999999999999999999999864322111     00000000      000


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .   ..+...+..+.+++.+||+.||++|||+.|++++
T Consensus       236 ~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          236 L---QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             C---SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             C---CCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            0   1111245678999999999999999999999863

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.95  E-value=7.2e-29  Score=209.93  Aligned_cols=154  Identities=23%  Similarity=0.318  Sum_probs=120.8

Q ss_pred             eeeeecc----cccccccCC-CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAANIDK-KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      .|+||||    +|.++.... ...+++.++..++.|++.||+|||+++   |+||||||+|||++.+             
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~  333 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV  333 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGG
T ss_pred             cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceE
Confidence            4899999    677764433 336899999999999999999999998   9999999999999751             


Q ss_pred             -----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 -----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 -----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       |+|||++.+..++.++||||||+++|||++ |..||.......  ..    ......     .
T Consensus       334 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--~~----~~i~~~-----~  402 (454)
T 1qcf_A          334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VI----RALERG-----Y  402 (454)
T ss_dssp             BCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HH----HHHHHT-----C
T ss_pred             cCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--HH----HHHHcC-----C
Confidence                             999999999999999999999999999999 999986432211  11    111111     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ....     +..++..+.+++.+||+.+|++||++.+|++.|+.+....
T Consensus       403 ~~~~-----~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~  446 (454)
T 1qcf_A          403 RMPR-----PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT  446 (454)
T ss_dssp             CCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred             CCCC-----CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence            0101     1125567899999999999999999999999999875544

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.8e-28  Score=195.85  Aligned_cols=156  Identities=24%  Similarity=0.194  Sum_probs=120.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++.++..++.|++.||+|||+++   ++||||||+||+++.+              
T Consensus        98 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  174 (298)
T 3pls_A           98 PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDI  174 (298)
T ss_dssp             CEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred             cEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence            3799999    677776666677999999999999999999999998   9999999999999752              


Q ss_pred             -------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           65 -------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        65 -------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                         |+|||.+.+..++.++||||||+++|+|++|..|+........ ....    .....    
T Consensus       175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-~~~~----~~~~~----  245 (298)
T 3pls_A          175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-LTHF----LAQGR----  245 (298)
T ss_dssp             TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-HHHH----HHTTC----
T ss_pred             cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-HHHH----hhcCC----
Confidence                               8999999999999999999999999999996666432222111 1111    00000    


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                       ...     .+...+..+.+++.+||+.+|.+|||+.++++.|+.+...+.
T Consensus       246 -~~~-----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~  290 (298)
T 3pls_A          246 -RLP-----QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL  290 (298)
T ss_dssp             -CCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred             -CCC-----CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence             000     011134578999999999999999999999999998765553

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.95  E-value=5.5e-28  Score=196.01  Aligned_cols=147  Identities=21%  Similarity=0.279  Sum_probs=113.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. .....+++.+++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        80 ~~lv~e~~~~~~L~~~l-~~~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  155 (323)
T 3tki_A           80 QYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVF  155 (323)
T ss_dssp             EEEEEECCTTEEGGGGS-BTTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCcHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeecccee
Confidence            5899999    555553 34456999999999999999999999998   999999999999975               


Q ss_pred             ----------------CCCChhhhhcCCC-CcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFF-SIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~-~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||++.+..+ +.++|||||||++|+|++|..||............+.     ...  ...
T Consensus       156 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~-----~~~--~~~  228 (323)
T 3tki_A          156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK-----EKK--TYL  228 (323)
T ss_dssp             EETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH-----TTC--TTS
T ss_pred             ccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-----ccc--ccC
Confidence                            1999999988765 7789999999999999999999975544322211111     000  000


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                            ... ......+.+++.+||+.+|++||++.|+++.
T Consensus       229 ------~~~-~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          229 ------NPW-KKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             ------TTG-GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ------Ccc-ccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence                  001 1145567899999999999999999998764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.95  E-value=1.2e-27  Score=193.34  Aligned_cols=168  Identities=14%  Similarity=0.129  Sum_probs=121.5

Q ss_pred             eeeeecc----cccccccC--CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceee----cC---------
Q 040682            3 KKLVYSK----LLDAANID--KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL----DS---------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~----~~---------   63 (216)
                      .++||||    +|.++...  ....+++.+++.++.|++.||+|||+++   |+||||||+||++    +.         
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Df  160 (319)
T 4euu_A           84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDF  160 (319)
T ss_dssp             EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCC
T ss_pred             EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccC
Confidence            5899999    66666333  2334999999999999999999999998   9999999999998    43         


Q ss_pred             -------------------CCCChhhhh--------cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc--hhhhhh
Q 040682           64 -------------------GYMPPEYAL--------RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN--LLGHAW  114 (216)
Q Consensus        64 -------------------~y~aPE~~~--------~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~--~~~~~~  114 (216)
                                         .|+|||++.        +..++.++|||||||++|||++|..||.........  ......
T Consensus       161 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  240 (319)
T 4euu_A          161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII  240 (319)
T ss_dssp             TTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred             CCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence                               299999987        467899999999999999999999998654433221  111111


Q ss_pred             hhhccCccccc---------cccc-cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          115 DLWKDDRVHEL---------IDPV-ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       115 ~~~~~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                      .......+...         .... .............+.+++.+||+.||++||++.|+++...+...
T Consensus       241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~  309 (319)
T 4euu_A          241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (319)
T ss_dssp             HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred             cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence            11000000000         0001 11122334477789999999999999999999999999987533

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.95  E-value=2.3e-28  Score=195.50  Aligned_cols=154  Identities=26%  Similarity=0.281  Sum_probs=119.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++.++..++.|++.||+|||+++   ++||||||+||+++.+              
T Consensus       102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~  178 (298)
T 3f66_A          102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM  178 (298)
T ss_dssp             CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred             eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccc
Confidence            4799999    777776666677899999999999999999999998   9999999999999752              


Q ss_pred             -------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCC-CCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           65 -------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK-KSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        65 -------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                         |+|||.+.+..++.++||||||+++|++++|. +||........  .....    ...   
T Consensus       179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~--~~~~~----~~~---  249 (298)
T 3f66_A          179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--TVYLL----QGR---  249 (298)
T ss_dssp             SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH--HHHHH----TTC---
T ss_pred             cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH--HHHHh----cCC---
Confidence                               89999999999999999999999999999954 45443222211  11100    000   


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                         .......    ++..+.+++.+||+.+|++||++.|+++.|+++....
T Consensus       250 ---~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  293 (298)
T 3f66_A          250 ---RLLQPEY----CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  293 (298)
T ss_dssp             ---CCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred             ---CCCCCcc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence               0000111    3456899999999999999999999999999875554

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.95  E-value=1.6e-28  Score=193.70  Aligned_cols=152  Identities=27%  Similarity=0.385  Sum_probs=118.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.  ..+.+++.+++.++.|++.||+|||+++..+++|+||||+||+++.               
T Consensus        81 ~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~  158 (271)
T 3dtc_A           81 LCLVMEFARGGPLNRVL--SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT  158 (271)
T ss_dssp             CEEEEECCTTEEHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred             eEEEEEcCCCCCHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence            5899999    666663  3457999999999999999999999987556899999999999963               


Q ss_pred             --------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 --------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 --------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                          .|+|||.+.+..++.++||||||+++|++++|+.||........     ..... .... 
T Consensus       159 Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~-~~~~-  231 (271)
T 3dtc_A          159 DFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV-----AYGVA-MNKL-  231 (271)
T ss_dssp             CCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH-----HHHHH-TSCC-
T ss_pred             cCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHhhh-cCCC-
Confidence                                18999999999999999999999999999999999864332111     01000 0000 


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                         ....     +..++..+.+++.+||+.+|++||++.|+++.|+.+
T Consensus       232 ---~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          232 ---ALPI-----PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             ---CCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             ---CCCC-----CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence               0111     111456789999999999999999999999999863

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.3e-28  Score=200.85  Aligned_cols=155  Identities=23%  Similarity=0.364  Sum_probs=118.1

Q ss_pred             eeeeecc----cccccccCCC----------------------CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCC
Q 040682            3 KKLVYSK----LLDAANIDKK----------------------RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKA   56 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~----------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~   56 (216)
                      .|+||||    +|.++.....                      ..+++.+++.++.|++.||+|||+++   |+||||||
T Consensus       124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp  200 (344)
T 1rjb_A          124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAA  200 (344)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSG
T ss_pred             cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCh
Confidence            5899999    6766643332                      34899999999999999999999998   99999999


Q ss_pred             CceeecC-------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCC
Q 040682           57 SNILLDS-------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNT  104 (216)
Q Consensus        57 ~nil~~~-------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~  104 (216)
                      +||+++.                               .|+|||.+.+..++.++||||||+++|+|++ |..||.....
T Consensus       201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  280 (344)
T 1rjb_A          201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV  280 (344)
T ss_dssp             GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence            9999975                               1999999999999999999999999999998 9999865432


Q ss_pred             CccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          105 GSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ... .    .......     ..+..+     ...+..+.+++.+||+.+|.+||++.++++.|+.+....
T Consensus       281 ~~~-~----~~~~~~~-----~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  336 (344)
T 1rjb_A          281 DAN-F----YKLIQNG-----FKMDQP-----FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA  336 (344)
T ss_dssp             SHH-H----HHHHHTT-----CCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             HHH-H----HHHHhcC-----CCCCCC-----CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence            211 1    1111111     011111     114567899999999999999999999999999864443

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.95  E-value=9.4e-29  Score=204.83  Aligned_cols=155  Identities=23%  Similarity=0.288  Sum_probs=120.5

Q ss_pred             eeeeecc----cccccccCC---------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDK---------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .++||||    +|.++....               ...+++.+++.++.|++.||+|||+++   |+||||||+|||++.
T Consensus       150 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~  226 (382)
T 3tt0_A          150 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTE  226 (382)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECT
T ss_pred             eEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEEcC
Confidence            4899999    666663222               245999999999999999999999998   999999999999974


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~  111 (216)
                                                     .|+|||.+.+..++.++|||||||++|+|++ |..||.......     
T Consensus       227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~-----  301 (382)
T 3tt0_A          227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-----  301 (382)
T ss_dssp             TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----
T ss_pred             CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence                                           1999999999999999999999999999999 999985432111     


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                       .........     ....+     ..++.++.+++.+||+.+|++||++.||++.|+++.....
T Consensus       302 -~~~~~~~~~-----~~~~~-----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  355 (382)
T 3tt0_A          302 -LFKLLKEGH-----RMDKP-----SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS  355 (382)
T ss_dssp             -HHHHHHTTC-----CCCCC-----SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred             -HHHHHHcCC-----CCCCC-----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence             111111110     01111     1145678999999999999999999999999998755443

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.95  E-value=5.8e-29  Score=205.15  Aligned_cols=154  Identities=25%  Similarity=0.332  Sum_probs=119.0

Q ss_pred             eeeeecc----cccccccC------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------
Q 040682            3 KKLVYSK----LLDAANID------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------   63 (216)
                      .|+||||    +|.++...      ....+++.+++.++.|++.||+|||+++   |+||||||+|||++.         
T Consensus       149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL  225 (367)
T 3l9p_A          149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKI  225 (367)
T ss_dssp             CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEE
Confidence            4899999    66666322      2245899999999999999999999999   999999999999972         


Q ss_pred             -------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhh
Q 040682           64 -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLW  117 (216)
Q Consensus        64 -------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~  117 (216)
                                               .|+|||++.+..++.++|||||||++|||++ |..||.......  ....    .
T Consensus       226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~--~~~~----i  299 (367)
T 3l9p_A          226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEF----V  299 (367)
T ss_dssp             CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHH----H
T ss_pred             CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH----H
Confidence                                     1999999999999999999999999999998 989986432211  1111    1


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ....     ....     +..++..+.+++.+||+.+|++||++.+|++.|+......
T Consensus       300 ~~~~-----~~~~-----~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~  347 (367)
T 3l9p_A          300 TSGG-----RMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  347 (367)
T ss_dssp             HTTC-----CCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             HcCC-----CCCC-----CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence            1110     0001     1114556899999999999999999999999999865543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.95  E-value=2.4e-28  Score=196.39  Aligned_cols=159  Identities=23%  Similarity=0.275  Sum_probs=115.2

Q ss_pred             eeeeecc---ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK---LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||   +|.++.. .....+++.+++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        94 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  170 (308)
T 3g33_A           94 VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY  170 (308)
T ss_dssp             EEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEECSCSCTTTS
T ss_pred             EEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEeeCcccccc
Confidence            5899999   6666633 33345999999999999999999999999   999999999999965               


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc---cCcccc---
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK---DDRVHE---  124 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---  124 (216)
                                   .|+|||++.+..++.++|||||||++|+|++|..||........  .........   ......   
T Consensus       171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~  248 (308)
T 3g33_A          171 SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ--LGKIFDLIGLPPEDDWPRDVS  248 (308)
T ss_dssp             TTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSCSSCS
T ss_pred             CCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCChhhccchhh
Confidence                         29999999999999999999999999999999999865433221  111111110   000000   


Q ss_pred             ----cccccccc--chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          125 ----LIDPVITQ--DEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       125 ----~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                          .+.+....  .....+....+.+++.+||+.||++|||+.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          249 LPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             SCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence                00000000  0111124567899999999999999999999875

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.95  E-value=4.3e-28  Score=201.11  Aligned_cols=166  Identities=18%  Similarity=0.234  Sum_probs=115.0

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      .|+||||    +|.++.. .....+++.+++.++.|++.||+|||+++   |+||||||+|||++.+             
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~  177 (389)
T 3gni_B          101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLS  177 (389)
T ss_dssp             EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEccccccee
Confidence            5899999    6666632 33456999999999999999999999998   9999999999999741             


Q ss_pred             -----------------------CCChhhhhc--CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhh--hhhh-
Q 040682           65 -----------------------YMPPEYALR--GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGH--AWDL-  116 (216)
Q Consensus        65 -----------------------y~aPE~~~~--~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~--~~~~-  116 (216)
                                             |+|||++.+  ..++.++|||||||++|+|++|..||.............  .... 
T Consensus       178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  257 (389)
T 3gni_B          178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL  257 (389)
T ss_dssp             CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred             eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence                                   899999987  578999999999999999999999997644332210000  0000 


Q ss_pred             hcc------------------Ccccccc--------ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--H
Q 040682          117 WKD------------------DRVHELI--------DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM--I  168 (216)
Q Consensus       117 ~~~------------------~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--L  168 (216)
                      ...                  ......+        .............+..+.+++.+||+.||++|||+.|++++  +
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f  337 (389)
T 3gni_B          258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF  337 (389)
T ss_dssp             ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGG
T ss_pred             ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHH
Confidence            000                  0000000        00000011222245679999999999999999999999865  4


Q ss_pred             ccc
Q 040682          169 SNE  171 (216)
Q Consensus       169 ~~~  171 (216)
                      +..
T Consensus       338 ~~~  340 (389)
T 3gni_B          338 KQI  340 (389)
T ss_dssp             GGC
T ss_pred             HHH
Confidence            443

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.95  E-value=1.1e-28  Score=195.81  Aligned_cols=150  Identities=24%  Similarity=0.272  Sum_probs=119.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.++..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        87 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  163 (281)
T 3cc6_A           87 TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYI  163 (281)
T ss_dssp             CEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred             CEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccc
Confidence            4789999    777775555667999999999999999999999998   999999999999964               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|+|||.+.+..++.++||||||+++|++++ |..||........  ...    .....     .
T Consensus       164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~--~~~----~~~~~-----~  232 (281)
T 3cc6_A          164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV--IGV----LEKGD-----R  232 (281)
T ss_dssp             ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH--HHH----HHHTC-----C
T ss_pred             ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH--HHH----HhcCC-----C
Confidence                           2999999999999999999999999999998 9999864332221  111    10000     0


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ...     +..++..+.+++.+||+.+|++||++.|+++.|+.+
T Consensus       233 ~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          233 LPK-----PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCC-----CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence            000     011445689999999999999999999999999875

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.95  E-value=1.7e-28  Score=214.53  Aligned_cols=154  Identities=24%  Similarity=0.302  Sum_probs=123.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       410 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~  486 (613)
T 2ozo_A          410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKAL  486 (613)
T ss_dssp             EEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred             eEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence            5899999    777776666677999999999999999999999998   999999999999964               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||++.+..++.++|||||||++|||++ |..||.......  ..    .....+.    
T Consensus       487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~----~~i~~~~----  556 (613)
T 2ozo_A          487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VM----AFIEQGK----  556 (613)
T ss_dssp             C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HH----HHHHTTC----
T ss_pred             cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HH----HHHHcCC----
Confidence                             2999999999999999999999999999998 999986543221  11    1111110    


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                       ...     .+..++..+.+++..||+.+|++||++.+|++.|+.+....
T Consensus       557 -~~~-----~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          557 -RME-----CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             -CCC-----CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             -CCC-----CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence             001     11125567999999999999999999999999999865443

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.1e-28  Score=196.62  Aligned_cols=156  Identities=25%  Similarity=0.310  Sum_probs=123.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++.++..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           84 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             cEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeee
Confidence            5799999    777776556677999999999999999999999998   999999999999864               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||.+.+..++.++||||||+++|+|++ |..||.......  ..    .......    
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~----~~i~~~~----  230 (287)
T 1u59_A          161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VM----AFIEQGK----  230 (287)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HH----HHHHTTC----
T ss_pred             ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HH----HHHhcCC----
Confidence                             1999999998899999999999999999998 999986433211  11    1111110    


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccccC
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCS  177 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~~  177 (216)
                       .+..     +..++..+.+++..||+.+|++||++.++++.|+.+......
T Consensus       231 -~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~  276 (287)
T 1u59_A          231 -RMEC-----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  276 (287)
T ss_dssp             -CCCC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred             -cCCC-----CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence             0111     112456789999999999999999999999999987555443

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.95  E-value=1.5e-27  Score=198.88  Aligned_cols=151  Identities=20%  Similarity=0.241  Sum_probs=115.0

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .||||||    +|.++... ....+++.++..++.|++.||+|||+++   |+||||||+|||++.              
T Consensus       134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEeccc
Confidence            5899999    56666333 3346999999999999999999999998   999999999999974              


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc--hhhhhhhhhccCcccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN--LLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  124 (216)
                                       .|+|||++.+..++.++|||||||++|+|++|..||.........  ......    ....  
T Consensus       211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~~--  284 (400)
T 1nxk_A          211 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQY--  284 (400)
T ss_dssp             CEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTCC--
T ss_pred             ccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCcc--
Confidence                             199999999889999999999999999999999999765433221  111110    0000  


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                          ......+. ..+..+.+++.+||+.||++||++.|++++
T Consensus       285 ----~~~~~~~~-~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          285 ----EFPNPEWS-EVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             ----CCCTTTTT-TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ----cCCCcccc-cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                00011111 145678999999999999999999999975

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.95  E-value=1.9e-28  Score=209.51  Aligned_cols=152  Identities=23%  Similarity=0.290  Sum_probs=120.0

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++.. .....+++..++.++.|++.||+|||+++   |+||||||+|||++.              
T Consensus       291 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~  367 (495)
T 1opk_A          291 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRL  367 (495)
T ss_dssp             CEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEEC
T ss_pred             EEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeeccccee
Confidence            5899999    6766633 34456999999999999999999999998   999999999999964              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||++.+..++.++|||||||++|||++ |..||.......  .    .......     .
T Consensus       368 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~----~~~~~~~-----~  436 (495)
T 1opk_A          368 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--V----YELLEKD-----Y  436 (495)
T ss_dssp             CTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--H----HHHHHTT-----C
T ss_pred             ccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--H----HHHHHcC-----C
Confidence                            2999999999999999999999999999999 888886433221  1    1111111     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                      ...     .+..++..+.+++.+||+.+|++||++.+|++.|+.+..
T Consensus       437 ~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          437 RME-----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             CCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             CCC-----CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            011     111255678999999999999999999999999998643

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.95  E-value=2e-29  Score=201.93  Aligned_cols=156  Identities=21%  Similarity=0.259  Sum_probs=118.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++.+++.++.|++.||+|||+++   ++|+||||+||+++.+              
T Consensus       100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  176 (302)
T 4e5w_A          100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI  176 (302)
T ss_dssp             EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccccccc
Confidence            4799999    777775555667999999999999999999999998   9999999999999541              


Q ss_pred             ------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCC---------ccchhhhhhhhh
Q 040682           65 ------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTG---------SFNLLGHAWDLW  117 (216)
Q Consensus        65 ------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~---------~~~~~~~~~~~~  117 (216)
                                        |+|||.+.+..++.++||||||+++|+|++|..|+......         ............
T Consensus       177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (302)
T 4e5w_A          177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL  256 (302)
T ss_dssp             CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred             cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH
Confidence                              99999999999999999999999999999999875321100         000000000000


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ...     ...     ..+..++..+.+++.+||+.+|.+|||+.++++.|+++
T Consensus       257 ~~~-----~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          257 KEG-----KRL-----PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             HTT-----CCC-----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hcc-----CCC-----CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            000     000     01112456789999999999999999999999999875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.95  E-value=3.6e-28  Score=195.98  Aligned_cols=157  Identities=20%  Similarity=0.195  Sum_probs=118.2

Q ss_pred             eeeeecc----ccccccc---CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANI---DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .|+||||    +|.++..   .....+++.+++.++.|++.||+|||+++   ++|+||||+||+++.            
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~  181 (317)
T 2buj_A          105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSM  181 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred             eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcc
Confidence            5799999    6666522   24567999999999999999999999998   999999999999964            


Q ss_pred             --------------------------CCCChhhhhcCC---CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhh
Q 040682           64 --------------------------GYMPPEYALRGF---FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAW  114 (216)
Q Consensus        64 --------------------------~y~aPE~~~~~~---~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~  114 (216)
                                                .|+|||.+.+..   ++.++||||||+++|+|++|..||.............. 
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-  260 (317)
T 2buj_A          182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV-  260 (317)
T ss_dssp             EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH-
T ss_pred             hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh-
Confidence                                      199999987553   68899999999999999999999853211111111000 


Q ss_pred             hhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          115 DLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                         ..     ....  +   .....+..+.+++.+||+.+|++||++.++++.|+.+....+
T Consensus       261 ---~~-----~~~~--~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~  309 (317)
T 2buj_A          261 ---QN-----QLSI--P---QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP  309 (317)
T ss_dssp             ---HC-----C--C--C---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred             ---hc-----cCCC--C---ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence               00     0000  0   001145578999999999999999999999999998755444

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.95  E-value=1.5e-28  Score=207.97  Aligned_cols=154  Identities=24%  Similarity=0.337  Sum_probs=120.8

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++... ....+++.++..++.|++.||+|||+++   |+||||||+|||++.              
T Consensus       253 ~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~  329 (452)
T 1fmk_A          253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL  329 (452)
T ss_dssp             CEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred             eEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCcccee
Confidence            4799999    77777433 2346899999999999999999999998   999999999999964              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||.+.+..++.++||||||+++|||++ |..||.......  .    ......+     .
T Consensus       330 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~----~~~i~~~-----~  398 (452)
T 1fmk_A          330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--V----LDQVERG-----Y  398 (452)
T ss_dssp             -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--H----HHHHHTT-----C
T ss_pred             cCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--H----HHHHHcC-----C
Confidence                            1999999999999999999999999999999 898885432111  1    1111111     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ....     +..++..+.+++.+||+.+|++|||+.+|++.|+.+....
T Consensus       399 ~~~~-----~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          399 RMPC-----PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             CCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             CCCC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence            0111     1125567899999999999999999999999999875544

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.95  E-value=4.3e-28  Score=196.81  Aligned_cols=149  Identities=20%  Similarity=0.248  Sum_probs=113.9

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++.. .....+++.+++.++.|++.||+|||+++   |+||||||+||+++.              
T Consensus       104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~  180 (327)
T 3lm5_A          104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGM  180 (327)
T ss_dssp             EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred             EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence            5899999    6666633 33567999999999999999999999998   999999999999875              


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||.+.+..++.++||||||+++|+|++|..||........  .....    ...     
T Consensus       181 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~----~~~-----  249 (327)
T 3lm5_A          181 SRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET--YLNIS----QVN-----  249 (327)
T ss_dssp             CEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH----HTC-----
T ss_pred             ccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHHH----hcc-----
Confidence                             19999999999999999999999999999999999864332111  00000    000     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       ........ ......+.+++.+||+.+|++||++.+++++
T Consensus       250 -~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          250 -VDYSEETF-SSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             -CCCCTTTT-TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             -cccCchhh-cccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence             00000111 1145678899999999999999999999854

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.95  E-value=3.8e-28  Score=197.33  Aligned_cols=168  Identities=18%  Similarity=0.213  Sum_probs=117.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcC---------CCCCeecCCCCCCceeecC------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQY---------SRLRIIHRDLKASNILLDS------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~---------~~~~iiH~dik~~nil~~~------   63 (216)
                      .++||||    +|.++...  ...++..+..++.|++.||+|||+.         +   |+||||||+|||++.      
T Consensus        87 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL  161 (336)
T 3g2f_A           87 YLLVMEYYPNGSLXKYLSL--HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVI  161 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEE
T ss_pred             EEEEEecCCCCcHHHHHhh--cccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEE
Confidence            3799999    67666432  3458999999999999999999998         7   999999999999975      


Q ss_pred             -------------------------------CCCChhhhhc-------CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCC
Q 040682           64 -------------------------------GYMPPEYALR-------GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTG  105 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~  105 (216)
                                                     .|+|||++.+       ..++.++|||||||++|||++|..|+......
T Consensus       162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~  241 (336)
T 3g2f_A          162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV  241 (336)
T ss_dssp             CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred             eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence                                           2899999986       34667899999999999999998776544332


Q ss_pred             ccchhhhhhhhhccC--------ccccccccccccc-hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          106 SFNLLGHAWDLWKDD--------RVHELIDPVITQD-EISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       106 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ...............        .......+..+.. .....++..+.+++.+||+.+|++|||+.|+++.|+++....
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~  320 (336)
T 3g2f_A          242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW  320 (336)
T ss_dssp             CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred             hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence            211000000000000        0000111111111 111226678999999999999999999999999999864443

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.95  E-value=7.6e-28  Score=195.13  Aligned_cols=164  Identities=18%  Similarity=0.267  Sum_probs=117.4

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|.++.......+++.+++.++.|++.||+|||+++   |+||||||+||+++.                
T Consensus        75 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  151 (324)
T 3mtl_A           75 LTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKS  151 (324)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-
T ss_pred             EEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCccccccc
Confidence            5899999   666665555567999999999999999999999998   999999999999975                


Q ss_pred             -------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc---cCcccccc
Q 040682           64 -------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK---DDRVHELI  126 (216)
Q Consensus        64 -------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  126 (216)
                                   .|+|||++.+ ..++.++|||||||++|+|++|..||........  .........   ........
T Consensus       152 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~  229 (324)
T 3mtl_A          152 IPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ--LHFIFRILGTPTEETWPGIL  229 (324)
T ss_dssp             -----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTGG
T ss_pred             CCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCChHhchhhh
Confidence                         1999999887 4689999999999999999999999975442221  111111100   00000000


Q ss_pred             c---------cccccc---hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH--HHccc
Q 040682          127 D---------PVITQD---EISLSMLMRYVKVALLCVQETVADRPTMSDVVS--MISNE  171 (216)
Q Consensus       127 ~---------~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~--~L~~~  171 (216)
                      .         +.....   .........+.+++.+||+.||++|||+.|+++  .+.+.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  288 (324)
T 3mtl_A          230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL  288 (324)
T ss_dssp             GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhc
Confidence            0         000000   011113567899999999999999999999986  34443

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.95  E-value=2.2e-28  Score=198.36  Aligned_cols=157  Identities=17%  Similarity=0.149  Sum_probs=109.9

Q ss_pred             eeeeecc---cccccc--cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK---LLDAAN--IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~--~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      .++||||   +|.++.  ....+.+++.+++.++.|++.||+|||+++ .+++||||||+||+++.+             
T Consensus       109 ~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  187 (337)
T 3ll6_A          109 FLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATT  187 (337)
T ss_dssp             EEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTTCBC
T ss_pred             EEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCcccee
Confidence            5899999   555552  234557999999999999999999999874 459999999999999751             


Q ss_pred             ----------------------------CCChhhh---hcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhh
Q 040682           65 ----------------------------YMPPEYA---LRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHA  113 (216)
Q Consensus        65 ----------------------------y~aPE~~---~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~  113 (216)
                                                  |+|||++   .+..++.++||||||+++|+|++|..||........      
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------  261 (337)
T 3ll6_A          188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI------  261 (337)
T ss_dssp             CSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred             ccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh------
Confidence                                        8999998   456788999999999999999999999854322110      


Q ss_pred             hhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccccCcc
Q 040682          114 WDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSLK  179 (216)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~~~~  179 (216)
                         .     ......... ..    ....+.+++.+||+.+|++||++.|+++.|+.+.......+
T Consensus       262 ---~-----~~~~~~~~~-~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~~  314 (337)
T 3ll6_A          262 ---V-----NGKYSIPPH-DT----QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNP  314 (337)
T ss_dssp             ------------CCCCTT-CC----SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCCT
T ss_pred             ---h-----cCcccCCcc-cc----cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCCC
Confidence               0     000000000 01    23357889999999999999999999999998766554333

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.95  E-value=4.9e-28  Score=192.95  Aligned_cols=159  Identities=17%  Similarity=0.226  Sum_probs=115.0

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|.++.....+.+++.+++.++.|++.||+|||+++   |+||||||+||+++.                
T Consensus        75 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  151 (288)
T 1ob3_A           75 LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFG  151 (288)
T ss_dssp             EEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred             EEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccC
Confidence            5899999   666665555577999999999999999999999998   999999999999975                


Q ss_pred             -------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc---Cccc---
Q 040682           64 -------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD---DRVH---  123 (216)
Q Consensus        64 -------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---  123 (216)
                                   .|+|||++.+. .++.++||||+||++|+|++|..||........  ..........   ....   
T Consensus       152 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  229 (288)
T 1ob3_A          152 IPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ--LMRIFRILGTPNSKNWPNVT  229 (288)
T ss_dssp             C---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTGG
T ss_pred             ccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHHCCCChhhchhhh
Confidence                         29999999765 589999999999999999999999865432211  1111110000   0000   


Q ss_pred             --ccccccc------ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          124 --ELIDPVI------TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       124 --~~~~~~~------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                        ...++..      ............+.+++.+||+.||++|||+.|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence              0000000      000011114567889999999999999999999875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.95  E-value=2.9e-28  Score=195.93  Aligned_cols=153  Identities=24%  Similarity=0.354  Sum_probs=118.6

Q ss_pred             eeeeecc----cccccccCCC-----------------CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceee
Q 040682            3 KKLVYSK----LLDAANIDKK-----------------RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL   61 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~   61 (216)
                      .++||||    +|.++.....                 ..+++.+++.++.|++.||+|||+++   ++|+||||+||++
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~  178 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL  178 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEE
Confidence            4899999    6666633222                 25899999999999999999999998   9999999999999


Q ss_pred             cC-------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccch
Q 040682           62 DS-------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNL  109 (216)
Q Consensus        62 ~~-------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~  109 (216)
                      +.                               .|+|||.+.+..++.++||||||+++|+|++ |..||........ .
T Consensus       179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~  257 (313)
T 1t46_A          179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-F  257 (313)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-H
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-H
Confidence            65                               1999999999999999999999999999999 9999865433221 1


Q ss_pred             hhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          110 LGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                          .......     ......     ...+..+.+++.+||+.+|.+||++.|+++.|+++..
T Consensus       258 ----~~~~~~~-----~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  307 (313)
T 1t46_A          258 ----YKMIKEG-----FRMLSP-----EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (313)
T ss_dssp             ----HHHHHHT-----CCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----HHHhccC-----CCCCCc-----ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence                1111100     011111     1144678999999999999999999999999997643

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.95  E-value=1e-27  Score=195.09  Aligned_cols=162  Identities=22%  Similarity=0.178  Sum_probs=119.5

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhh--------cCCCCCeecCCCCCCceeecC------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLH--------QYSRLRIIHRDLKASNILLDS------   63 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~iiH~dik~~nil~~~------   63 (216)
                      ..|+||||    +|.++..  +..+++.+++.++.|++.||+|||        +.+   |+||||||+||+++.      
T Consensus       114 ~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL  188 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCI  188 (342)
T ss_dssp             CEEEEECCCTTCBHHHHHH--HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEE
T ss_pred             eeEEEEeecCCCcHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEE
Confidence            35899999    6766643  246899999999999999999999        777   999999999999964      


Q ss_pred             ---------------------------CCCChhhhhcCC------CCcchhhhhHHHHHHHHHhC----------CCCCC
Q 040682           64 ---------------------------GYMPPEYALRGF------FSIKSDVFSFGVLMLEILSG----------KKSTA  100 (216)
Q Consensus        64 ---------------------------~y~aPE~~~~~~------~~~~~Dv~s~G~~l~ell~g----------~~~~~  100 (216)
                                                 .|+|||.+.+..      ++.++||||||+++|||++|          ..||.
T Consensus       189 ~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~  268 (342)
T 1b6c_B          189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY  268 (342)
T ss_dssp             CCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             EECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcc
Confidence                                       199999998762      33689999999999999999          55664


Q ss_pred             cCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          101 VYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                      ............ .....    .....+.++......++...+.+++.+||+.+|++||++.+|++.|+.+..
T Consensus       269 ~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~  336 (342)
T 1b6c_B          269 DLVPSDPSVEEM-RKVVC----EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  336 (342)
T ss_dssp             TTSCSSCCHHHH-HHHHT----TSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccCcCcccHHHH-HHHHH----HHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            433222211111 11111    111223332222233477889999999999999999999999999998644

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.95  E-value=2.9e-28  Score=196.53  Aligned_cols=155  Identities=26%  Similarity=0.392  Sum_probs=117.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++.+++.++.|++.||+|||+++   ++|+||||+||+++.+              
T Consensus       104 ~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~  180 (319)
T 2y4i_B          104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNGKVVITDFGLFSISG  180 (319)
T ss_dssp             EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC--CCEECCCSCCC---
T ss_pred             eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEeCCCEEEeecCCccccc
Confidence            5899999    777776666667999999999999999999999998   9999999999998741              


Q ss_pred             -------------------CCChhhhhc---------CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhh
Q 040682           65 -------------------YMPPEYALR---------GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDL  116 (216)
Q Consensus        65 -------------------y~aPE~~~~---------~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~  116 (216)
                                         |+|||.+.+         ..++.++||||||+++|+|++|..||.......     ..+. 
T Consensus       181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~-  254 (319)
T 2y4i_B          181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA-----IIWQ-  254 (319)
T ss_dssp             -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH-----HHHH-
T ss_pred             cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHH-
Confidence                               899999874         357899999999999999999999986432211     1111 


Q ss_pred             hccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          117 WKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ....     ..+......    .+..+.+++.+||+.+|++||++.++++.|+.+....
T Consensus       255 ~~~~-----~~~~~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          255 MGTG-----MKPNLSQIG----MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             HHTT-----CCCCCCCSS----CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred             hccC-----CCCCCCcCC----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence            1111     111111111    3346889999999999999999999999999976554

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.95  E-value=2.6e-28  Score=198.72  Aligned_cols=154  Identities=22%  Similarity=0.342  Sum_probs=119.0

Q ss_pred             eeeeecc----cccccccCC-----------------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCC
Q 040682            3 KKLVYSK----LLDAANIDK-----------------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLK   55 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~-----------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik   55 (216)
                      .|+||||    +|.++....                       ...+++.+++.++.|++.||+|||+++   |+|||||
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlk  201 (343)
T 1luf_A          125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLA  201 (343)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCS
T ss_pred             eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence            4899999    666663321                       257999999999999999999999998   9999999


Q ss_pred             CCceeecC-------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCC
Q 040682           56 ASNILLDS-------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYN  103 (216)
Q Consensus        56 ~~nil~~~-------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~  103 (216)
                      |+||+++.                               .|+|||.+.+..++.++||||||+++|+|++ |..||....
T Consensus       202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  281 (343)
T 1luf_A          202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA  281 (343)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence            99999964                               1999999999999999999999999999999 999986432


Q ss_pred             CCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          104 TGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ...      ...........     ..     +..++..+.+++.+||+.+|++||++.++++.|+++....
T Consensus       282 ~~~------~~~~~~~~~~~-----~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          282 HEE------VIYYVRDGNIL-----AC-----PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA  337 (343)
T ss_dssp             HHH------HHHHHHTTCCC-----CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred             hHH------HHHHHhCCCcC-----CC-----CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence            211      11111111110     01     1114557899999999999999999999999999875443

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.95  E-value=4.8e-28  Score=195.00  Aligned_cols=155  Identities=22%  Similarity=0.260  Sum_probs=120.1

Q ss_pred             eeeeecc----cccccc-----cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------
Q 040682            3 KKLVYSK----LLDAAN-----IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~-----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------   64 (216)
                      .++||||    +|.++.     ......+++.+++.++.|++.||.|||+++   ++||||||+||+++.+         
T Consensus       116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~Dfg  192 (313)
T 3brb_A          116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFG  192 (313)
T ss_dssp             EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEECSCS
T ss_pred             cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEeecC
Confidence            4899999    666652     134467999999999999999999999998   9999999999999751         


Q ss_pred             ----------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           65 ----------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        65 ----------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                            |+|||.+.+..++.++||||||+++|+|++ |..||........  ...    .....
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~----~~~~~  266 (313)
T 3brb_A          193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM--YDY----LLHGH  266 (313)
T ss_dssp             CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHH----HHTTC
T ss_pred             cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--HHH----HHcCC
Confidence                                  899999999999999999999999999999 8888754332211  111    10110


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                           .+..     +..++..+.+++.+||+.+|++||++.++++.|+++...+|
T Consensus       267 -----~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp  311 (313)
T 3brb_A          267 -----RLKQ-----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP  311 (313)
T ss_dssp             -----CCCC-----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             -----CCCC-----CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence                 0111     11145678999999999999999999999999998765543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.95  E-value=2.1e-28  Score=199.93  Aligned_cols=147  Identities=23%  Similarity=0.283  Sum_probs=110.2

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .||||||   +|.++.. ..+.+++.++..++.|++.||+|||+++   |+||||||+|||++.                
T Consensus        84 ~~lv~e~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~~~~~kl~DFG~a~~~~~  159 (343)
T 3dbq_A           84 IYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLIDFGIANQMQP  159 (343)
T ss_dssp             EEEEECCCSEEHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTEEEECCCSSSCCC--
T ss_pred             EEEEEeCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEECCcEEEeecccccccCc
Confidence            5899999   6666633 3457999999999999999999999998   999999999999864                


Q ss_pred             --------------CCCChhhhhc-----------CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc
Q 040682           64 --------------GYMPPEYALR-----------GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK  118 (216)
Q Consensus        64 --------------~y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~  118 (216)
                                    .|+|||++.+           ..++.++|||||||++|+|++|..||.......    ....... 
T Consensus       160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~~~~~~~-  234 (343)
T 3dbq_A          160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI----SKLHAII-  234 (343)
T ss_dssp             ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH----HHHHHHH-
T ss_pred             ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH----HHHHHHh-
Confidence                          2999999875           578899999999999999999999985322211    1111111 


Q ss_pred             cCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          119 DDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                              ++..... .+......+.+++..||+.+|.+|||+.|++++
T Consensus       235 --------~~~~~~~-~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          235 --------DPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             --------CTTSCCC-CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             --------cCCcccC-CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence                    1110000 001123468899999999999999999999864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.95  E-value=6.8e-28  Score=192.40  Aligned_cols=160  Identities=19%  Similarity=0.241  Sum_probs=113.2

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .++||||   ++........+.+++.+++.++.|++.||+|||+++   |+||||||+||+++.+               
T Consensus        76 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~  152 (292)
T 3o0g_A           76 LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFG  152 (292)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecC
Confidence            5899999   444444444567999999999999999999999998   9999999999999751               


Q ss_pred             --------------CCChhhhhcCC-CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc---Cccc---
Q 040682           65 --------------YMPPEYALRGF-FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD---DRVH---  123 (216)
Q Consensus        65 --------------y~aPE~~~~~~-~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---  123 (216)
                                    |+|||++.+.. ++.++|||||||++|+|++|..|+........ ...........   ....   
T Consensus       153 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~  231 (292)
T 3o0g_A          153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             SCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH-HHHHHHHHHCCCCTTTCTTGG
T ss_pred             CccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhhhhhc
Confidence                          99999998775 89999999999999999999888644332211 11111111100   0000   


Q ss_pred             cccc----c----ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          124 ELID----P----VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       124 ~~~~----~----~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ...+    +    ..............+.+++.+||+.||++|||+.|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            0000    0    00000111124567889999999999999999999876

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.95  E-value=5.9e-28  Score=195.30  Aligned_cols=154  Identities=23%  Similarity=0.305  Sum_probs=118.3

Q ss_pred             eeeeecc----ccccccc-----CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------
Q 040682            3 KKLVYSK----LLDAANI-----DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------   64 (216)
                      .++||||    +|.++..     .....+++.+++.++.|++.||+|||+++   |+||||||+||+++.+         
T Consensus       106 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl~Dfg  182 (323)
T 3qup_A          106 PMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFG  182 (323)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCC
T ss_pred             cEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEEeecc
Confidence            3899999    6666522     22225899999999999999999999998   9999999999999751         


Q ss_pred             ----------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           65 ----------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        65 ----------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                            |+|||.+.+..++.++|||||||++|++++ |..||........  ...    .....
T Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~----~~~~~  256 (323)
T 3qup_A          183 LSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--YNY----LIGGN  256 (323)
T ss_dssp             C-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHH----HHTTC
T ss_pred             ccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH--HHH----HhcCC
Confidence                                  999999999999999999999999999999 8888864332211  111    10110


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      .     ...     +...+..+.+++.+||+.+|++||++.++++.|+++...+
T Consensus       257 ~-----~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~  300 (323)
T 3qup_A          257 R-----LKQ-----PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL  300 (323)
T ss_dssp             C-----CCC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             C-----CCC-----CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            0     000     1114467899999999999999999999999999875554

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.95  E-value=4.1e-28  Score=192.40  Aligned_cols=150  Identities=21%  Similarity=0.294  Sum_probs=117.0

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++.. .....+++..++.++.|++.||+|||+++   ++|+||||+||+++.              
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  171 (284)
T 2a19_B           95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTS  171 (284)
T ss_dssp             EEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEEECcchhhee
Confidence            5899999    6777633 33457999999999999999999999998   999999999999864              


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++||||||+++|+|++|..|+...        ..........        .
T Consensus       172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~~~~~~~~~--------~  235 (284)
T 2a19_B          172 LKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SKFFTDLRDG--------I  235 (284)
T ss_dssp             SSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HHHHHHHHTT--------C
T ss_pred             ccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HHHHHHhhcc--------c
Confidence                          299999999999999999999999999999999875311        0011111111        1


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                      .. ..    .+..+.+++.+||+.+|++||++.|+++.|..+...+.
T Consensus       236 ~~-~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          236 IS-DI----FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             CC-TT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred             cc-cc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence            11 11    34467899999999999999999999999998765544

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.95  E-value=1e-27  Score=192.82  Aligned_cols=160  Identities=20%  Similarity=0.303  Sum_probs=121.4

Q ss_pred             eeeeecc----ccccccc---CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANI---DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++||||    +|.++..   .....+++.+++.++.|++.||+|||+++   ++|+||||+||+++.            
T Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~  183 (310)
T 2wqm_A          107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLG  183 (310)
T ss_dssp             EEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC---
T ss_pred             EEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccce
Confidence            5799999    6666622   34567999999999999999999999998   999999999999975            


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||.+.+..++.++||||||+++|+|++|..||.............    ......    
T Consensus       184 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~----  255 (310)
T 2wqm_A          184 RFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK----IEQCDY----  255 (310)
T ss_dssp             ---------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHH----HHTTCS----
T ss_pred             eeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHH----hhcccC----
Confidence                             2999999999999999999999999999999999986433221111111    111111    


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccccCc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLCSL  178 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~~~  178 (216)
                       +.....    ..+..+.+++.+||+.||++||++.+|++.|+.+......+
T Consensus       256 -~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~  302 (310)
T 2wqm_A          256 -PPLPSD----HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS  302 (310)
T ss_dssp             -CCCCTT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred             -CCCccc----ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence             111111    14557899999999999999999999999999986665433

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=3.2e-28  Score=191.49  Aligned_cols=151  Identities=25%  Similarity=0.331  Sum_probs=119.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++.++..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        78 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~  154 (267)
T 3t9t_A           78 ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV  154 (267)
T ss_dssp             CEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred             eEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccc
Confidence            5799999    777775555567999999999999999999999998   999999999999964               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|+|||++.+..++.++||||||+++|+|++ |..||.......  ..    ......     ..
T Consensus       155 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~----~~i~~~-----~~  223 (267)
T 3t9t_A          155 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VV----EDISTG-----FR  223 (267)
T ss_dssp             CCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HH----HHHHTT-----CC
T ss_pred             ccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--HH----HHHhcC-----Cc
Confidence                           1999999999999999999999999999999 888875432111  11    111111     00


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      ...+.     ..+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       224 ~~~~~-----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (267)
T 3t9t_A          224 LYKPR-----LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  263 (267)
T ss_dssp             CCCCT-----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCc-----cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            11111     13456889999999999999999999999998764

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.95  E-value=9.9e-28  Score=196.80  Aligned_cols=98  Identities=28%  Similarity=0.355  Sum_probs=86.4

Q ss_pred             eeeeecc---cccccc-cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK---LLDAAN-IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||   +|.++. ......+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       111 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~~  187 (360)
T 3llt_A          111 MCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTD  187 (360)
T ss_dssp             EEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTTT
T ss_pred             eEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhcccc
Confidence            5799999   776663 333456999999999999999999999998   999999999999952               


Q ss_pred             ------------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCC
Q 040682           64 ------------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN  103 (216)
Q Consensus        64 ------------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~  103 (216)
                                                          .|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus       188 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  263 (360)
T 3llt_A          188 GKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE  263 (360)
T ss_dssp             CCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc
Confidence                                                2999999999999999999999999999999999996543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=4.7e-28  Score=196.30  Aligned_cols=149  Identities=15%  Similarity=0.226  Sum_probs=115.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++.++..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~  152 (321)
T 1tki_A           76 LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQAR  152 (321)
T ss_dssp             EEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred             EEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCe
Confidence            5899999    566665555567999999999999999999999998   999999999999974               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||++.+..++.++||||||+++|+|++|..||.......  ....    .....      .
T Consensus       153 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~----i~~~~------~  220 (321)
T 1tki_A          153 QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ--IIEN----IMNAE------Y  220 (321)
T ss_dssp             ECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHH----HHHTC------C
T ss_pred             ECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH--HHHH----HHcCC------C
Confidence                           1999999998889999999999999999999999986433211  1111    00000      0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .......+ ..+.++.+++.+||+.||.+|||+.|++++
T Consensus       221 ~~~~~~~~-~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          221 TFDEEAFK-EISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             CCCHHHHT-TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCChhhhc-cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            00011111 245678999999999999999999999863

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.95  E-value=3.3e-28  Score=195.67  Aligned_cols=151  Identities=25%  Similarity=0.369  Sum_probs=117.9

Q ss_pred             eeeeecc----cccccccCC-----------------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCC
Q 040682            3 KKLVYSK----LLDAANIDK-----------------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLK   55 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~-----------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik   55 (216)
                      .++||||    +|.++....                       ...+++.+++.++.|++.||+|||+++   ++|||||
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dik  177 (314)
T 2ivs_A          101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLA  177 (314)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred             eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccc
Confidence            4899999    666663222                       235899999999999999999999998   9999999


Q ss_pred             CCceeecCC-------------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCC
Q 040682           56 ASNILLDSG-------------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYN  103 (216)
Q Consensus        56 ~~nil~~~~-------------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~  103 (216)
                      |+||+++.+                               |+|||.+.+..++.++||||||+++|+|++ |..||....
T Consensus       178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  257 (314)
T 2ivs_A          178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP  257 (314)
T ss_dssp             GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence            999999751                               999999999999999999999999999999 999986433


Q ss_pred             CCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          104 TGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      ....      .........     +..     +..++..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       258 ~~~~------~~~~~~~~~-----~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          258 PERL------FNLLKTGHR-----MER-----PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             GGGH------HHHHHTTCC-----CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHH------HHHhhcCCc-----CCC-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            2211      111111110     111     1114567899999999999999999999999998753

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.95  E-value=5.7e-28  Score=195.85  Aligned_cols=154  Identities=23%  Similarity=0.275  Sum_probs=119.9

Q ss_pred             eeeeecc----cccccccCC---------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDK---------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+||||    +|.++....               ...+++.+++.++.|++.||+|||+++   |+||||||+||+++.
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~  177 (327)
T 1fvr_A          101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGE  177 (327)
T ss_dssp             EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECG
T ss_pred             eEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcC
Confidence            5899999    677764332               247999999999999999999999998   999999999999964


Q ss_pred             ----------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhh
Q 040682           64 ----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAW  114 (216)
Q Consensus        64 ----------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~  114 (216)
                                                  .|+|||.+.+..++.++||||||+++|+|++ |..||.......      ..
T Consensus       178 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------~~  251 (327)
T 1fvr_A          178 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LY  251 (327)
T ss_dssp             GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HH
T ss_pred             CCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH------HH
Confidence                                        2999999999889999999999999999998 999985432211      11


Q ss_pred             hhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          115 DLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ......     ......     ...+..+.+++.+||+.+|++||++.++++.|+.+....
T Consensus       252 ~~~~~~-----~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          252 EKLPQG-----YRLEKP-----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             HHGGGT-----CCCCCC-----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHhhcC-----CCCCCC-----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence            111111     011111     114457899999999999999999999999999865443

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.95  E-value=7e-28  Score=195.21  Aligned_cols=147  Identities=21%  Similarity=0.308  Sum_probs=113.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++..  +..+++.++..++.|++.||+|||+++   ++||||||+||+++.               
T Consensus       117 ~~lv~e~~~~~~L~~~l~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~  191 (321)
T 2c30_A          117 LWVLMEFLQGGALTDIVS--QVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQI  191 (321)
T ss_dssp             EEEEECCCCSCBHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCCHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeec
Confidence            5899999    6666633  346999999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++||||||+++|+|++|..||.......  ....    ....     ..+.
T Consensus       192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~--~~~~----~~~~-----~~~~  260 (321)
T 2c30_A          192 SKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKR----LRDS-----PPPK  260 (321)
T ss_dssp             CSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHH----HHHS-----SCCC
T ss_pred             ccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH----HhcC-----CCCC
Confidence                          1999999999899999999999999999999999986432211  1111    1000     0111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                      ..   .....+..+.+++.+||+.+|++||++.|+++.-
T Consensus       261 ~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp  296 (321)
T 2c30_A          261 LK---NSHKVSPVLRDFLERMLVRDPQERATAQELLDHP  296 (321)
T ss_dssp             CT---TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred             cC---ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence            11   1111455788999999999999999999998753

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.94  E-value=8.8e-28  Score=192.24  Aligned_cols=156  Identities=25%  Similarity=0.313  Sum_probs=119.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++.+++.++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        86 ~~lv~e~~~g~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  161 (294)
T 4eqm_A           86 YYLVMEYIEGPTLSEYIE-SHGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKAL  161 (294)
T ss_dssp             EEEEEECCCSCBHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred             EEEEEeCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence            5899999    6666633 3346999999999999999999999998   999999999999964               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||.+.+..++.++||||||+++|+|++|+.||.......     ......... .     +
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-----~~~~~~~~~-~-----~  230 (294)
T 4eqm_A          162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS-----IAIKHIQDS-V-----P  230 (294)
T ss_dssp             -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH-----HHHHHHSSC-C-----C
T ss_pred             ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHhhcc-C-----C
Confidence                           2999999999999999999999999999999999986433211     001111110 0     0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCC-CHHHHHHHHcccccc
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRP-TMSDVVSMISNEHLN  174 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~evl~~L~~~~~~  174 (216)
                      ... .......+..+.+++.+||+.+|++|| ++.++.+.|+.....
T Consensus       231 ~~~-~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          231 NVT-TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             CHH-HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             Ccc-hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence            000 011112456789999999999999998 899999999876433

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.94  E-value=5.8e-28  Score=199.71  Aligned_cols=141  Identities=16%  Similarity=0.234  Sum_probs=108.0

Q ss_pred             ceeeeecc---cccccccCC------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------
Q 040682            2 CKKLVYSK---LLDAANIDK------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------   63 (216)
                      ..||||||   +|.++....      ...+++..++.++.|++.||+|||+++   |+||||||+|||++.         
T Consensus       174 ~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DF  250 (377)
T 3byv_A          174 SRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGF  250 (377)
T ss_dssp             SEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCG
T ss_pred             EEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEec
Confidence            36899999   666663321      123445888899999999999999998   999999999999975         


Q ss_pred             ----------------CCCChhhhhcC-----------CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhh
Q 040682           64 ----------------GYMPPEYALRG-----------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDL  116 (216)
Q Consensus        64 ----------------~y~aPE~~~~~-----------~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~  116 (216)
                                      .|+|||++.+.           .++.++|||||||++|||++|..||........         
T Consensus       251 G~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~---------  321 (377)
T 3byv_A          251 EHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG---------  321 (377)
T ss_dssp             GGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC---------
T ss_pred             hhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc---------
Confidence                            39999999987           899999999999999999999999864332211         


Q ss_pred             hccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          117 WKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                           ....... .  .    ..+..+.+++.+||+.||++||++.|+++
T Consensus       322 -----~~~~~~~-~--~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          322 -----SEWIFRS-C--K----NIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             -----SGGGGSS-C--C----CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             -----hhhhhhh-c--c----CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence                 0000000 0  0    13457899999999999999999999985

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.94  E-value=6.9e-28  Score=194.19  Aligned_cols=155  Identities=23%  Similarity=0.299  Sum_probs=115.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++.+++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        91 ~~lv~e~~~g~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~  166 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI  166 (311)
T ss_dssp             EEEEEECCCEEEHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred             cEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence            3899999    6666633 2346999999999999999999999998   999999999999964               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||.+.+..++.++||||||+++|+|++|+.||.......     .........      
T Consensus       167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-----~~~~~~~~~------  235 (311)
T 3ork_A          167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-----VAYQHVRED------  235 (311)
T ss_dssp             ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHCC------
T ss_pred             cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHhcCC------
Confidence                             2999999999999999999999999999999999986433211     111111111      


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHH-HHHHHcccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSD-VVSMISNEHLN  174 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~e-vl~~L~~~~~~  174 (216)
                        ...........+..+.+++.+||+.+|++||++.+ +...|......
T Consensus       236 --~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~  282 (311)
T 3ork_A          236 --PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG  282 (311)
T ss_dssp             --CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred             --CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence              00011111114567899999999999999997655 44566554333

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.94  E-value=5.3e-28  Score=194.64  Aligned_cols=152  Identities=27%  Similarity=0.338  Sum_probs=117.7

Q ss_pred             eeeeecc----cccccccCCC---------------CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDKK---------------RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .++||||    +|.++.....               ..+++.+++.++.|++.||+|||+++   ++||||||+||+++.
T Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~  183 (316)
T 2xir_A          107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSE  183 (316)
T ss_dssp             CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECG
T ss_pred             eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECC
Confidence            5899999    6776633332               23899999999999999999999998   999999999999964


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~  111 (216)
                                                     .|+|||.+.+..++.++||||||+++|+|++ |..||........ .  
T Consensus       184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-~--  260 (316)
T 2xir_A          184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-F--  260 (316)
T ss_dssp             GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH-H--
T ss_pred             CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH-H--
Confidence                                           2999999999999999999999999999998 9999864432211 1  


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                        ........     ....+     ...+..+.+++.+||+.+|.+||++.|+++.|+.+.
T Consensus       261 --~~~~~~~~-----~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          261 --CRRLKEGT-----RMRAP-----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             --HHHHHHTC-----CCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --HHHhccCc-----cCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence              11111110     01111     113456899999999999999999999999999764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.94  E-value=5e-28  Score=191.79  Aligned_cols=151  Identities=22%  Similarity=0.250  Sum_probs=117.8

Q ss_pred             eeeeecc----cccccccCC-CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDK-KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++.... ...+++.++..++.|++.||+|||+++   ++|+||||+||+++.              
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~  166 (278)
T 1byg_A           90 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKE  166 (278)
T ss_dssp             CEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred             eEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccc
Confidence            5899999    666663322 234899999999999999999999998   999999999999975              


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                  .|+|||.+.+..++.++||||||+++|++++ |..||.......  .    .......     ..+..
T Consensus       167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~----~~~~~~~-----~~~~~  235 (278)
T 1byg_A          167 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--V----VPRVEKG-----YKMDA  235 (278)
T ss_dssp             ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--H----HHHHTTT-----CCCCC
T ss_pred             ccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--H----HHHHhcC-----CCCCC
Confidence                        2999999999999999999999999999998 999986433211  1    1111111     01111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      .     ...+..+.+++..||+.+|++||++.++++.|+.+.
T Consensus       236 ~-----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~  272 (278)
T 1byg_A          236 P-----DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  272 (278)
T ss_dssp             C-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             c-----ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence            1     114567899999999999999999999999998763

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.94  E-value=5e-28  Score=201.10  Aligned_cols=147  Identities=22%  Similarity=0.275  Sum_probs=109.9

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .||||||   +|.++... ...+++.++..++.|++.||+|||+++   |+||||||+|||++.+               
T Consensus       131 ~~lv~E~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~  206 (390)
T 2zmd_A          131 IYMVMECGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLIDFGIANQMQP  206 (390)
T ss_dssp             EEEEEECCSEEHHHHHHH-CSSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEESSSCEEECCCSSSCCC--
T ss_pred             EEEEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEECCeEEEEecCccccccC
Confidence            5899999   67666333 347899999999999999999999998   9999999999999642               


Q ss_pred             ---------------CCChhhhhc-----------CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc
Q 040682           65 ---------------YMPPEYALR-----------GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK  118 (216)
Q Consensus        65 ---------------y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~  118 (216)
                                     |+|||++.+           ..++.++|||||||++|||++|..||.......    ........
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~----~~~~~~~~  282 (390)
T 2zmd_A          207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI----SKLHAIID  282 (390)
T ss_dssp             -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH----HHHHHHHC
T ss_pred             CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH----HHHHHHhC
Confidence                           999999875           368899999999999999999999985432111    11111111


Q ss_pred             cCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          119 DDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..     .....+. .    ....+.+++.+||+.+|++||++.|++++
T Consensus       283 ~~-----~~~~~~~-~----~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          283 PN-----HEIEFPD-I----PEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             TT-----SCCCCCC-C----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cc-----ccCCCCc-c----chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            00     0000111 1    23468899999999999999999999854

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.94  E-value=7.7e-28  Score=191.43  Aligned_cols=153  Identities=24%  Similarity=0.292  Sum_probs=119.5

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++.. .....+++.+++.++.|++.||+|||+++   ++|+||||+||+++.              
T Consensus        84 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~  160 (288)
T 3kfa_A           84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL  160 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCcccee
Confidence            5899999    6666633 34556999999999999999999999998   999999999999964              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||.+.+..++.++||||||+++|++++ |..||........      .......     .
T Consensus       161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~------~~~~~~~-----~  229 (288)
T 3kfa_A          161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKD-----Y  229 (288)
T ss_dssp             SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH------HHHHHTT-----C
T ss_pred             ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH------HHHHhcc-----C
Confidence                            2999999999999999999999999999999 8888864332211      1111110     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                      ....     +..++..+.+++..||+.+|.+||++.++++.|+.+...
T Consensus       230 ~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          230 RMER-----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             CCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCC-----CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence            0111     111456789999999999999999999999999876443

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.94  E-value=1.9e-27  Score=197.44  Aligned_cols=149  Identities=22%  Similarity=0.203  Sum_probs=115.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~  199 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLAT  199 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred             EEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccce
Confidence            5899999    666665555567999999999999999999999998   999999999999963               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||++.+..++.++|||||||++|+|++|..||.......  ....    ......  .+.+
T Consensus       200 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--~~~~----i~~~~~--~~~~  271 (387)
T 1kob_A          200 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE--TLQN----VKRCDW--EFDE  271 (387)
T ss_dssp             ECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHH----HHHCCC--CCCS
T ss_pred             ecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH--HHHH----HHhCCC--CCCc
Confidence                           1999999999999999999999999999999999986533211  1111    100000  0001


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                          .... ..+..+.+++.+||+.||++||++.|++++
T Consensus       272 ----~~~~-~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          272 ----DAFS-SVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             ----STTT-TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             ----cccc-cCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence                1111 145678999999999999999999999864

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.94  E-value=3.2e-28  Score=197.62  Aligned_cols=152  Identities=24%  Similarity=0.324  Sum_probs=116.7

Q ss_pred             eeeeecc----cccccccCC-------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--
Q 040682            3 KKLVYSK----LLDAANIDK-------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--   63 (216)
                      .|+||||    +|.++....             ...+++..++.++.|++.||+|||+++   |+||||||+||+++.  
T Consensus       125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~  201 (333)
T 2i1m_A          125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGH  201 (333)
T ss_dssp             CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGGG
T ss_pred             eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCCC
Confidence            5799999    666653221             345899999999999999999999998   999999999999964  


Q ss_pred             -----------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhh
Q 040682           64 -----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHA  113 (216)
Q Consensus        64 -----------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~  113 (216)
                                                   .|+|||.+.+..++.++||||||+++|+|++ |..||........ .    
T Consensus       202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~----  276 (333)
T 2i1m_A          202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-F----  276 (333)
T ss_dssp             EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-H----
T ss_pred             eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-H----
Confidence                                         2999999999999999999999999999998 8888864332211 1    


Q ss_pred             hhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          114 WDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      .......     .....+     ...+..+.+++..||+.+|.+||++.|+++.|+...
T Consensus       277 ~~~~~~~-----~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          277 YKLVKDG-----YQMAQP-----AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA  325 (333)
T ss_dssp             HHHHHHT-----CCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHhcC-----CCCCCC-----CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence            1111110     001011     113456889999999999999999999999998753

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.94  E-value=1.3e-27  Score=189.24  Aligned_cols=144  Identities=24%  Similarity=0.375  Sum_probs=100.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.+++.++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~  162 (278)
T 3cok_A           86 VYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQL  162 (278)
T ss_dssp             EEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence            5899999    677765555577999999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++||||||+++|++++|..||........         .     .......
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---------~-----~~~~~~~  228 (278)
T 3cok_A          163 KMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT---------L-----NKVVLAD  228 (278)
T ss_dssp             C----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------------CCSSC
T ss_pred             cCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH---------H-----HHHhhcc
Confidence                          29999999988899999999999999999999999864332211         0     0000000


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .   ..+...+..+.+++.+||+.+|++||++.++++
T Consensus       229 ~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          229 Y---EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             C---CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             c---CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            0   011113457889999999999999999998875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.94  E-value=5.3e-28  Score=208.51  Aligned_cols=154  Identities=24%  Similarity=0.337  Sum_probs=120.4

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .||||||    +|.+++.. ....+++.+++.++.|++.||+|||+++   |+||||||+|||++.              
T Consensus       336 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~  412 (535)
T 2h8h_A          336 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL  412 (535)
T ss_dssp             CEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTT
T ss_pred             ceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEccccccee
Confidence            4799999    67776433 2345899999999999999999999998   999999999999964              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||.+.+..++.++|||||||++|||++ |..||.......  .    .......     .
T Consensus       413 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~----~~~i~~~-----~  481 (535)
T 2h8h_A          413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--V----LDQVERG-----Y  481 (535)
T ss_dssp             CCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--H----HHHHHTT-----C
T ss_pred             cCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--H----HHHHHcC-----C
Confidence                            1999999999999999999999999999999 888885432111  1    1111111     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      ....     +..++..+.+++.+||+.+|++||++.+|++.|+.+....
T Consensus       482 ~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          482 RMPC-----PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             CCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred             CCCC-----CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence            0111     1125567899999999999999999999999999875444

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.94  E-value=1.7e-27  Score=193.15  Aligned_cols=162  Identities=17%  Similarity=0.159  Sum_probs=115.4

Q ss_pred             eeeeecc---cccccc-cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK---LLDAAN-IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||   +|.++. ......+++.++..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        92 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~  168 (339)
T 1z57_A           92 ICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDE  168 (339)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccccc
Confidence            5899999   666663 333346899999999999999999999998   999999999999853               


Q ss_pred             ------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhh
Q 040682           64 ------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGH  112 (216)
Q Consensus        64 ------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~  112 (216)
                                                    .|+|||++.+..++.++|||||||++||+++|..||........ .....
T Consensus       169 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  248 (339)
T 1z57_A          169 RTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER  248 (339)
T ss_dssp             EEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHH
T ss_pred             ccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence                                          19999999999999999999999999999999999875443221 00000


Q ss_pred             --------hhhhhccCcc------------------ccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          113 --------AWDLWKDDRV------------------HELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       113 --------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                              .+........                  .....+..............+.+++.+||+.||.+|||+.|+++
T Consensus       249 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence                    0000000000                  00000000001112235678999999999999999999999975


Q ss_pred             H
Q 040682          167 M  167 (216)
Q Consensus       167 ~  167 (216)
                      +
T Consensus       329 h  329 (339)
T 1z57_A          329 H  329 (339)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.94  E-value=1.2e-27  Score=194.19  Aligned_cols=153  Identities=19%  Similarity=0.195  Sum_probs=104.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++.++..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        81 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a  156 (325)
T 3kn6_A           81 TFLVMELLNGGELFERIK-KKKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFA  156 (325)
T ss_dssp             EEEEECCCCSCBHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTC
T ss_pred             EEEEEEccCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccc
Confidence            5899999    5555533 3457999999999999999999999998   999999999999953               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-chhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-NLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||++.+..++.++||||||+++|+|++|..||........ ...............   
T Consensus       157 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~---  233 (325)
T 3kn6_A          157 RLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF---  233 (325)
T ss_dssp             EECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCC---
T ss_pred             eecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCC---
Confidence                             29999999999999999999999999999999999976543221 111111111111110   


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                         .... ......+..+.+++.+||+.||++||++.|+++
T Consensus       234 ---~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          234 ---SFEG-EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             ---CCCS-HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             ---CCCc-ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence               1111 111225667899999999999999999999874

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.94  E-value=4.9e-28  Score=191.83  Aligned_cols=154  Identities=25%  Similarity=0.342  Sum_probs=119.2

Q ss_pred             eeeeecc----cccccccCCC-CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDKK-RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++..... ..+++.++..++.|++.||+|||+++   ++|+||||+||+++.              
T Consensus        82 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  158 (279)
T 1qpc_A           82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL  158 (279)
T ss_dssp             CEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             cEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCccccc
Confidence            4799999    6777643322 36999999999999999999999998   999999999999975              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||.+.+..++.++||||||+++|+|++ |..||.......  ..    ......     .
T Consensus       159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~----~~~~~~-----~  227 (279)
T 1qpc_A          159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VI----QNLERG-----Y  227 (279)
T ss_dssp             CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HH----HHHHTT-----C
T ss_pred             ccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HH----HHHhcc-----c
Confidence                            2999999998889999999999999999999 888875432211  11    111111     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      .....     ...+..+.+++.+||+.+|++||++.++++.|+++....
T Consensus       228 ~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  271 (279)
T 1qpc_A          228 RMVRP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT  271 (279)
T ss_dssp             CCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CCCCc-----ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence            01111     114567899999999999999999999999999865443

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.94  E-value=1.4e-27  Score=193.79  Aligned_cols=148  Identities=21%  Similarity=0.215  Sum_probs=113.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++. .....+++.++..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        89 ~~lv~e~~~~~~L~~~l-~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  164 (326)
T 2y0a_A           89 VILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL  164 (326)
T ss_dssp             EEEEEECCCSCBHHHHH-TTSSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEEEEcCCCCCHHHHH-HhcCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence            5899999    666663 33457999999999999999999999998   999999999999853               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||++.+..++.++|||||||++|+|++|..||.......  ....    ....      
T Consensus       165 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~----~~~~------  232 (326)
T 2y0a_A          165 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLAN----VSAV------  232 (326)
T ss_dssp             CEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHH----HHHT------
T ss_pred             CeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHH----HHhc------
Confidence                             2999999998899999999999999999999999986432211  1000    0000      


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ...... ......+..+.+++.+||+.+|++|||+.|++++
T Consensus       233 ~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          233 NYEFED-EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             CCCCCH-HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             CCCcCc-cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            000000 1111145678999999999999999999999874

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.94  E-value=3e-28  Score=193.96  Aligned_cols=153  Identities=24%  Similarity=0.278  Sum_probs=118.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.......+++.++..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A           95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccc
Confidence            3689999    666665555567999999999999999999999998   999999999999953               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||.+.+..++.++||||||+++|+|++ |..||.......     ......... .   
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~~-~---  242 (291)
T 1u46_A          172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-----ILHKIDKEG-E---  242 (291)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHHTSC-C---
T ss_pred             cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH-----HHHHHHccC-C---
Confidence                             1999999999889999999999999999999 999986433211     111100000 0   


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                       ...     .+...+..+.+++.+||+.+|++||++.++++.|++...
T Consensus       243 -~~~-----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          243 -RLP-----RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             -CCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             -CCC-----CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence             000     011145678999999999999999999999999997643

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.94  E-value=4.9e-28  Score=193.15  Aligned_cols=153  Identities=26%  Similarity=0.325  Sum_probs=119.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++... .+.+++.+++.++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        92 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  167 (291)
T 1xbb_A           92 WMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL  167 (291)
T ss_dssp             EEEEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             cEEEEEeCCCCCHHHHHHh-CcCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence            5799999    66666333 346999999999999999999999998   999999999999853               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||.+.+..++.++||||||+++|+|++ |..||.......  .    ........    
T Consensus       168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~----~~~~~~~~----  237 (291)
T 1xbb_A          168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--V----TAMLEKGE----  237 (291)
T ss_dssp             CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--H----HHHHHTTC----
T ss_pred             ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--H----HHHHHcCC----
Confidence                             1999999998889999999999999999999 999986433211  1    11111110    


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                       .+..     +..++..+.+++.+||+.+|++||++.++++.|+++....
T Consensus       238 -~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  281 (291)
T 1xbb_A          238 -RMGC-----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  281 (291)
T ss_dssp             -CCCC-----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             -CCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence             0111     1124567899999999999999999999999999865443

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.94  E-value=6.3e-28  Score=197.68  Aligned_cols=148  Identities=29%  Similarity=0.382  Sum_probs=113.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   ++.++.......+++.++..++.|++.||+|||+++   |+||||||+||+++.                
T Consensus       129 ~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          129 AWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             EEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             EEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence            5899999   555554445567999999999999999999999998   999999999999975                


Q ss_pred             ---------CCCChhhhh---cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccc
Q 040682           64 ---------GYMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVIT  131 (216)
Q Consensus        64 ---------~y~aPE~~~---~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (216)
                               .|+|||++.   +..++.++|||||||++|||++|..||.......     .........      .+...
T Consensus       206 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-----~~~~~~~~~------~~~~~  274 (348)
T 1u5q_A          206 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALYHIAQNE------SPALQ  274 (348)
T ss_dssp             SBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSC------CCCCC
T ss_pred             CCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhcC------CCCCC
Confidence                     299999985   4578999999999999999999999986432211     111111111      11111


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                      ...    .+..+.+++.+||+.+|++||++.++++..
T Consensus       275 ~~~----~~~~l~~li~~~l~~dP~~Rps~~~ll~h~  307 (348)
T 1u5q_A          275 SGH----WSEYFRNFVDSCLQKIPQDRPTSEVLLKHR  307 (348)
T ss_dssp             CTT----SCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred             CCC----CCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence            111    345688999999999999999999998643

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.94  E-value=7.4e-28  Score=211.23  Aligned_cols=150  Identities=27%  Similarity=0.320  Sum_probs=118.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.. ..+.+++.+++.++.||+.||+|||+++   |+||||||+|||++.               
T Consensus       444 ~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~  519 (635)
T 4fl3_A          444 WMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL  519 (635)
T ss_dssp             EEEEEECCTTEEHHHHHH-HCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred             EEEEEEccCCCCHHHHHh-hCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence            4799999    6666643 3456999999999999999999999998   999999999999964               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||++.+..++.++|||||||++|||++ |+.||.......      .........    
T Consensus       520 ~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i~~~~----  589 (635)
T 4fl3_A          520 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------VTAMLEKGE----  589 (635)
T ss_dssp             TC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTC----
T ss_pred             ccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCC----
Confidence                             1999999999999999999999999999998 999986433211      111111110    


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                       ....     +..++..+.+++..||+.+|++||++.+|++.|+++.
T Consensus       590 -~~~~-----p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  630 (635)
T 4fl3_A          590 -RMGC-----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  630 (635)
T ss_dssp             -CCCC-----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             -CCCC-----CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence             0111     1125567999999999999999999999999998753

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.94  E-value=1.4e-27  Score=193.57  Aligned_cols=167  Identities=22%  Similarity=0.270  Sum_probs=119.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++.+++.++.|++.||+|||+++   ++|+||||+||+++.+              
T Consensus       119 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~  195 (326)
T 2w1i_A          119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL  195 (326)
T ss_dssp             CEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             eEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence            4799999    777775555567999999999999999999999998   9999999999999641              


Q ss_pred             ------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhh-hhhhccCccccc
Q 040682           65 ------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHA-WDLWKDDRVHEL  125 (216)
Q Consensus        65 ------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  125 (216)
                                        |+|||.+.+..++.++||||||+++|+|++|..|+.............. ........+.+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (326)
T 2w1i_A          196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL  275 (326)
T ss_dssp             CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred             cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH
Confidence                              8999999998899999999999999999999988643210000000000 000000000000


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                      +...... ..+..++.++.+++.+||+.+|++||++.|+++.|+.+..
T Consensus       276 ~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          276 LKNNGRL-PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             HHTTCCC-CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhcCCCC-CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            0000000 0111245679999999999999999999999999998643

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.94  E-value=1.1e-26  Score=197.09  Aligned_cols=157  Identities=22%  Similarity=0.186  Sum_probs=113.5

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .||||||   .+.....   ..+++.++..++.|++.||+|||+++   |+||||||+|||++.                
T Consensus       142 ~~lv~E~~~~~l~~~~~---~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  215 (464)
T 3ttj_A          142 VYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG  215 (464)
T ss_dssp             EEEEEECCSEEHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred             EEEEEeCCCCCHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence            4899999   3333322   24899999999999999999999998   999999999999975                


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh----------------
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD----------------  115 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~----------------  115 (216)
                                  .|+|||++.+..++.++||||+||++|||++|+.||.+......  ...+..                
T Consensus       216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~--~~~i~~~lg~p~~~~~~~~~~~  293 (464)
T 3ttj_A          216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ--WNKVIEQLGTPCPEFMKKLQPT  293 (464)
T ss_dssp             -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCSCCHHHHTTSCHH
T ss_pred             CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCHHHHHHcchh
Confidence                        29999999999999999999999999999999999976442111  000000                


Q ss_pred             ---hhccC------cccccccccc--ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          116 ---LWKDD------RVHELIDPVI--TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       116 ---~~~~~------~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                         .....      .+...+....  ...........++.+|+.+||+.||++|||+.|++++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             HHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence               00000      0000000000  0011122236779999999999999999999999864

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.94  E-value=2.3e-27  Score=193.61  Aligned_cols=159  Identities=17%  Similarity=0.186  Sum_probs=112.9

Q ss_pred             eeeeecc---ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec----------------
Q 040682            3 KKLVYSK---LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD----------------   62 (216)
Q Consensus         3 ~~lV~Ey---~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~----------------   62 (216)
                      .++||||   ++.+. .......+++.+++.++.|++.||+|||+++   |+||||||+|||++                
T Consensus        97 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A           97 MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             EEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccc
Confidence            5799999   33333 3444457999999999999999999999998   99999999999992                


Q ss_pred             ---C--------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhh
Q 040682           63 ---S--------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHA  113 (216)
Q Consensus        63 ---~--------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~  113 (216)
                         .                          .|+|||++.+..++.++|||||||++|||++|..||........  ....
T Consensus       174 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~  251 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH--LVMM  251 (355)
T ss_dssp             EEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHH
T ss_pred             cccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH--HHHH
Confidence               1                          29999999999999999999999999999999999975443211  0000


Q ss_pred             hhhh-----------ccCccc------------------cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHH
Q 040682          114 WDLW-----------KDDRVH------------------ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDV  164 (216)
Q Consensus       114 ~~~~-----------~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev  164 (216)
                      ....           ......                  +...+.............++.+++.+||+.||++|||+.|+
T Consensus       252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~  331 (355)
T 2eu9_A          252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA  331 (355)
T ss_dssp             HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence            0000           000000                  00000000000111245688999999999999999999998


Q ss_pred             HH
Q 040682          165 VS  166 (216)
Q Consensus       165 l~  166 (216)
                      ++
T Consensus       332 l~  333 (355)
T 2eu9_A          332 LL  333 (355)
T ss_dssp             TT
T ss_pred             hc
Confidence            74

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.94  E-value=1e-26  Score=190.17  Aligned_cols=160  Identities=19%  Similarity=0.200  Sum_probs=113.5

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   ++..........+++.+++.++.|++.||+|||+++   |+||||||+|||++.                
T Consensus        99 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  175 (351)
T 3mi9_A           99 IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFS  175 (351)
T ss_dssp             EEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence            4799999   455554555567999999999999999999999998   999999999999974                


Q ss_pred             -----------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhh-----------
Q 040682           64 -----------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAW-----------  114 (216)
Q Consensus        64 -----------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~-----------  114 (216)
                                       .|+|||++.+. .++.++|||||||++|+|++|..||........  .....           
T Consensus       176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~  253 (351)
T 3mi9_A          176 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ--LALISQLCGSITPEVW  253 (351)
T ss_dssp             CCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTS
T ss_pred             ccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCChhhc
Confidence                             19999998764 689999999999999999999999875432211  11110           


Q ss_pred             hhhccCccccccccccc-cchhhH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          115 DLWKDDRVHELIDPVIT-QDEISL-----SMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       115 ~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ...........+..... ......     .....+.+++.+||+.||++|||+.|++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             TTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            00000000000000000 000010     013468899999999999999999998864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.94  E-value=1.5e-27  Score=190.90  Aligned_cols=144  Identities=19%  Similarity=0.231  Sum_probs=109.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++  ...+.+++.+++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus       113 ~~lv~e~~~~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  187 (298)
T 2zv2_A          113 LYMVFELVNQGPVMEV--PTLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEF  187 (298)
T ss_dssp             EEEEEECCTTCBSCCS--SCSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCCEEEecCCCcccc
Confidence            5899999    55554  33457999999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCC---CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 --------------GYMPPEYALRGF---FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 --------------~y~aPE~~~~~~---~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                    .|+|||.+.+..   ++.++|||||||++|+|++|..||.......     . .......... . 
T Consensus       188 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-----~-~~~~~~~~~~-~-  259 (298)
T 2zv2_A          188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC-----L-HSKIKSQALE-F-  259 (298)
T ss_dssp             SSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----H-HHHHHHCCCC-C-
T ss_pred             ccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH-----H-HHHHhcccCC-C-
Confidence                          299999987765   3788999999999999999999986432111     0 0111111000 0 


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       +.  .    ...+..+.+++.+||+.||++||++.|+++
T Consensus       260 -~~--~----~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          260 -PD--Q----PDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             -CS--S----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -CC--c----cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence             00  0    114457899999999999999999999874

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.94  E-value=1e-27  Score=194.95  Aligned_cols=153  Identities=24%  Similarity=0.320  Sum_probs=118.3

Q ss_pred             eeeeecc----cccccccCCC---------------CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDKK---------------RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+||||    +|.++.....               ..+++.+++.++.|++.||+|||+++   |+|+||||+||+++.
T Consensus       116 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~  192 (334)
T 2pvf_A          116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTE  192 (334)
T ss_dssp             CEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECT
T ss_pred             eEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEEcC
Confidence            4899999    6776633322               34899999999999999999999998   999999999999974


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~  111 (216)
                                                     .|+|||.+.+..++.++||||||+++|+|++ |..||.......  .. 
T Consensus       193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~-  269 (334)
T 2pvf_A          193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LF-  269 (334)
T ss_dssp             TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HH-
T ss_pred             CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH--HH-
Confidence                                           1999999999899999999999999999999 999885432111  11 


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                         .......     .....     ..++..+.+++.+||+.+|++||++.|+++.|+++...
T Consensus       270 ---~~~~~~~-----~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~  319 (334)
T 2pvf_A          270 ---KLLKEGH-----RMDKP-----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  319 (334)
T ss_dssp             ---HHHHHTC-----CCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---HHHhcCC-----CCCCC-----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence               1111110     01111     11455789999999999999999999999999987443

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.94  E-value=3.2e-27  Score=194.43  Aligned_cols=148  Identities=22%  Similarity=0.283  Sum_probs=113.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.+.. .....+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       103 ~~lv~e~~~gg~L~~~l-~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a  178 (362)
T 2bdw_A          103 HYLVFDLVTGGELFEDI-VAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA  178 (362)
T ss_dssp             EEEEECCCCSCBHHHHH-TTCSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEEEEecCCCCCHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence            5899999    554442 33456999999999999999999999998   999999999999953               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||++.+..++.++|||||||++|+|++|..||.......  .    .........    .
T Consensus       179 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~--~----~~~i~~~~~----~  248 (362)
T 2bdw_A          179 IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--L----YAQIKAGAY----D  248 (362)
T ss_dssp             BCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H----HHHHHHTCC----C
T ss_pred             eEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--H----HHHHHhCCC----C
Confidence                            2999999999899999999999999999999999986432211  1    111111100    0


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        .+...+. ..+..+.+++.+||+.||++||++.|++++
T Consensus       249 --~~~~~~~-~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          249 --YPSPEWD-TVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             --CCTTGGG-GSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             --CCccccc-CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence              0111111 145678999999999999999999998854

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.94  E-value=4.5e-27  Score=191.57  Aligned_cols=138  Identities=24%  Similarity=0.321  Sum_probs=109.4

Q ss_pred             eeeeecc-----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK-----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey-----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||     +|.++ ......+++..+..++.|++.||+|||+++   |+||||||+||+++.              
T Consensus       104 ~~lv~e~~~~g~~l~~~-~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~  179 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAF-IDRHPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAY  179 (335)
T ss_dssp             EEEEEECCTTSCBHHHH-HHTCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEeCCCCccHHHH-HHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccceE
Confidence            5799998     33444 333446999999999999999999999998   999999999999975              


Q ss_pred             --------------CCCChhhhhcCCC-CcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 --------------GYMPPEYALRGFF-SIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~-~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                    .|+|||++.+..+ +.++|||||||++|+|++|..||......                ......+
T Consensus       180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----------------~~~~~~~  243 (335)
T 3dls_A          180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET----------------VEAAIHP  243 (335)
T ss_dssp             CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------------TTTCCCC
T ss_pred             CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------------HhhccCC
Confidence                          2999999988876 78999999999999999999998531110                0000000


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                         ...    .+..+.+++.+||+.+|++||++.++++.
T Consensus       244 ---~~~----~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          244 ---PYL----VSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             ---SSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             ---Ccc----cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               011    34568999999999999999999999875

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.94  E-value=2.1e-27  Score=194.10  Aligned_cols=150  Identities=20%  Similarity=0.226  Sum_probs=112.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.+.. ...+.+++.++..++.|++.||+|||+++   |+||||||+||++..               
T Consensus        91 ~~lv~E~~~gg~L~~~i-~~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~  166 (342)
T 2qr7_A           91 VYVVTELMKGGELLDKI-LRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGF  166 (342)
T ss_dssp             EEEEECCCCSCBHHHHH-HTCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred             EEEEEeCCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence            5899999    444443 33456999999999999999999999998   999999999999732               


Q ss_pred             ------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 ------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 ------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                        .|+|||++.+..++.++|||||||++|+|++|..||........   ............   
T Consensus       167 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---~~~~~~i~~~~~---  240 (342)
T 2qr7_A          167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP---EEILARIGSGKF---  240 (342)
T ss_dssp             CEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH---HHHHHHHHHCCC---
T ss_pred             cccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH---HHHHHHHccCCc---
Confidence                              29999999888889999999999999999999999975432221   111111111111   


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                         ......++ ..+..+.+++.+||+.||++||++.++++
T Consensus       241 ---~~~~~~~~-~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          241 ---SLSGGYWN-SVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             ---CCCSTTTT-TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ---ccCccccc-cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence               01111111 14567899999999999999999999985

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.94  E-value=1.3e-27  Score=196.68  Aligned_cols=150  Identities=20%  Similarity=0.209  Sum_probs=110.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.. ..+.+++.+++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        91 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~  166 (361)
T 3uc3_A           91 LAIIMEYASGGELYERIC-NAGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSK  166 (361)
T ss_dssp             EEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-
T ss_pred             EEEEEEeCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccc
Confidence            5899999    5555532 3346999999999999999999999998   999999999999963               


Q ss_pred             ---------------CCCChhhhhcCCCCcc-hhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIK-SDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~-~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|+|||++.+..+..+ +|||||||++|+|++|+.||........ ............       
T Consensus       167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~-------  238 (361)
T 3uc3_A          167 SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQRILSVK-------  238 (361)
T ss_dssp             --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHHHHTTC-------
T ss_pred             cccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHHHhcCC-------
Confidence                           2999999998887755 8999999999999999999975443322 111111111000       


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ...+   .....+..+.+++.+||+.+|++|||+.|++++
T Consensus       239 ~~~~---~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          239 YSIP---DDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             CCCC---TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CCCC---CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            0000   000134578899999999999999999999864

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.94  E-value=5.4e-27  Score=192.15  Aligned_cols=149  Identities=19%  Similarity=0.210  Sum_probs=113.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++. ...+.+++.+++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus       123 ~~lv~e~~~~~~L~~~l-~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a  198 (349)
T 2w4o_A          123 ISLVLELVTGGELFDRI-VEKGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLS  198 (349)
T ss_dssp             EEEEECCCCSCBHHHHH-TTCSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred             EEEEEEeCCCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccc
Confidence            5899999    565553 33456999999999999999999999998   999999999999962               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||++.+..++.++|||||||++|||++|..||........ .    ..........    
T Consensus       199 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~----~~~i~~~~~~----  269 (349)
T 2w4o_A          199 KIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-M----FRRILNCEYY----  269 (349)
T ss_dssp             --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH-H----HHHHHTTCCC----
T ss_pred             cccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH-H----HHHHHhCCCc----
Confidence                            19999999999999999999999999999999999864332211 0    1111111000    


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        ... ....+.+..+.+++.+||+.||++||++.|++++
T Consensus       270 --~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          270 --FIS-PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             --CCT-TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             --cCC-chhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              000 0111145678999999999999999999999863

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.94  E-value=1.7e-27  Score=192.44  Aligned_cols=152  Identities=22%  Similarity=0.290  Sum_probs=117.3

Q ss_pred             eeeeecc----cccccccCC---------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-----
Q 040682            3 KKLVYSK----LLDAANIDK---------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-----   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-----   64 (216)
                      .++||||    +|.++....         ...+++.+++.++.|++.||+|||+++   |+||||||+||+++.+     
T Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl  179 (322)
T 1p4o_A          103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI  179 (322)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEE
T ss_pred             cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEE
Confidence            5799999    666663221         245799999999999999999999998   9999999999999751     


Q ss_pred             --------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhh
Q 040682           65 --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLW  117 (216)
Q Consensus        65 --------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~  117 (216)
                                                |+|||.+.+..++.++||||||+++|+|++ |..||.......      .....
T Consensus       180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~  253 (322)
T 1p4o_A          180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ------VLRFV  253 (322)
T ss_dssp             CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH------HHHHH
T ss_pred             CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH------HHHHH
Confidence                                      999999999999999999999999999999 788875432211      11111


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                      ......     ..     +..++..+.+++.+||+.+|++||++.|+++.|++...
T Consensus       254 ~~~~~~-----~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          254 MEGGLL-----DK-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HTTCCC-----CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HcCCcC-----CC-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            111110     00     11145678999999999999999999999999998633

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.94  E-value=9.2e-27  Score=191.60  Aligned_cols=148  Identities=14%  Similarity=0.124  Sum_probs=115.9

Q ss_pred             eeeeecc----cccccccC----CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----------
Q 040682            3 KKLVYSK----LLDAANID----KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----------   63 (216)
                      .||||||    +|.++...    ....+++.+++.++.|++.||+|||+++   |+||||||+|||++.           
T Consensus       142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~~  218 (365)
T 3e7e_A          142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDDL  218 (365)
T ss_dssp             EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC------
T ss_pred             cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccccc
Confidence            5899999    66666322    4567999999999999999999999998   999999999999954           


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGH  112 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~  112 (216)
                                                     .|+|||++.+..++.++|||||||++|||++|+.||........     
T Consensus       219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-----  293 (365)
T 3e7e_A          219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-----  293 (365)
T ss_dssp             CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----
T ss_pred             cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-----
Confidence                                           19999999999999999999999999999999999853322110     


Q ss_pred             hhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCC-CCHHHHHHHHcccccc
Q 040682          113 AWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADR-PTMSDVVSMISNEHLN  174 (216)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R-ps~~evl~~L~~~~~~  174 (216)
                                  .+........    ....+.+++..|++.+|.+| |++.++.+.|++....
T Consensus       294 ------------~~~~~~~~~~----~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          294 ------------KPEGLFRRLP----HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             ------------EECSCCTTCS----SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ------------eechhccccC----cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence                        0011111111    23457788999999999999 6788888888875433

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.94  E-value=2.3e-27  Score=195.19  Aligned_cols=147  Identities=20%  Similarity=0.203  Sum_probs=113.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. ...+.+++.++..++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        90 ~~lv~e~~~gg~L~~~l-~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~  165 (361)
T 2yab_A           90 VVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (361)
T ss_dssp             EEEEEECCCSCBHHHHH-TTCSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred             EEEEEEcCCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence            5899999    565553 33457999999999999999999999998   999999999999853               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||++.+..++.++|||||||++|+|++|..||.......  ....    .....     
T Consensus       166 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~--~~~~----i~~~~-----  234 (361)
T 2yab_A          166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLAN----ITAVS-----  234 (361)
T ss_dssp             CEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHH----HHTTC-----
T ss_pred             ceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH----HHhcC-----
Confidence                             1999999999899999999999999999999999986432211  1111    10100     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       .......+ ...+..+.+++.+||+.||.+||++.|+++
T Consensus       235 -~~~~~~~~-~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          235 -YDFDEEFF-SQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             -CCCCHHHH-TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             -CCCCchhc-cCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence             00000111 124567899999999999999999999875

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.94  E-value=1.1e-27  Score=194.21  Aligned_cols=154  Identities=25%  Similarity=0.337  Sum_probs=118.6

Q ss_pred             eeeeecc----cccccccCC------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------
Q 040682            3 KKLVYSK----LLDAANIDK------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------   63 (216)
                      .|+||||    +|.++....      ...+++.+++.++.|++.||+|||+++   ++||||||+||+++.         
T Consensus       108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEE
Confidence            4899999    676663322      245899999999999999999999998   999999999999972         


Q ss_pred             -------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhh
Q 040682           64 -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLW  117 (216)
Q Consensus        64 -------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~  117 (216)
                                               .|+|||.+.+..++.++||||||+++|+|++ |..||.......  ..    ...
T Consensus       185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~----~~~  258 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VL----EFV  258 (327)
T ss_dssp             CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HH----HHH
T ss_pred             CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH--HH----HHH
Confidence                                     1999999999999999999999999999998 888875432111  11    111


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      .....     +...     ..++..+.+++.+||+.+|.+||++.++++.|+.+....
T Consensus       259 ~~~~~-----~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~  306 (327)
T 2yfx_A          259 TSGGR-----MDPP-----KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  306 (327)
T ss_dssp             HTTCC-----CCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             hcCCC-----CCCC-----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence            11100     1111     114457899999999999999999999999999865443

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.94  E-value=4.4e-27  Score=198.42  Aligned_cols=148  Identities=20%  Similarity=0.265  Sum_probs=113.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.+.. ...+.+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        85 ~~lv~E~~~gg~L~~~i-~~~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a  160 (444)
T 3soa_A           85 HYLIFDLVTGGELFEDI-VAREYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLA  160 (444)
T ss_dssp             EEEEECCCBCCBHHHHH-HHCSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred             EEEEEEeCCCCCHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence            5899999    454442 23456999999999999999999999998   999999999999972               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||++.+..++.++||||+||++|+|++|..||.......  ..    .....+..    
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~--~~----~~i~~~~~----  230 (444)
T 3soa_A          161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR--LY----QQIKAGAY----  230 (444)
T ss_dssp             BCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HH----HHHHHTCC----
T ss_pred             EEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH--HH----HHHHhCCC----
Confidence                             1999999999899999999999999999999999985432211  11    11111100    


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      +  .+...++ ..+..+.+++.+||+.||++||++.|++++
T Consensus       231 ~--~~~~~~~-~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          231 D--FPSPEWD-TVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             C--CCTTTTT-TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             C--CCccccc-cCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            0  0111111 145678999999999999999999999864

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.94  E-value=6.9e-27  Score=194.52  Aligned_cols=166  Identities=15%  Similarity=0.158  Sum_probs=120.0

Q ss_pred             eeeeecc----cccccccCC--CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceee----cC---------
Q 040682            3 KKLVYSK----LLDAANIDK--KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL----DS---------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~----~~---------   63 (216)
                      .++||||    +|.++....  ...+++.+++.++.|++.||+|||+++   |+||||||+||++    +.         
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DF  160 (396)
T 4eut_A           84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDF  160 (396)
T ss_dssp             EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCG
T ss_pred             eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecC
Confidence            5899999    666663332  234999999999999999999999998   9999999999998    32         


Q ss_pred             -------------------CCCChhhhhc--------CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhh
Q 040682           64 -------------------GYMPPEYALR--------GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDL  116 (216)
Q Consensus        64 -------------------~y~aPE~~~~--------~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~  116 (216)
                                         .|+|||++.+        ..++.++|||||||++|||++|..||.......... ......
T Consensus       161 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~-~~~~~~  239 (396)
T 4eut_A          161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK-EVMYKI  239 (396)
T ss_dssp             GGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCH-HHHHHH
T ss_pred             CCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchH-HHHHHH
Confidence                               2999999875        457789999999999999999999987544332211 111111


Q ss_pred             hccC---ccccc---------cccc-cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          117 WKDD---RVHEL---------IDPV-ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       117 ~~~~---~~~~~---------~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      ....   .+...         .... .............+.+++.+||+.||++||++.|+++.++.+.
T Consensus       240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il  308 (396)
T 4eut_A          240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (396)
T ss_dssp             HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred             hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence            1110   00000         0001 1112233447778999999999999999999999998888753

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.94  E-value=1.6e-27  Score=200.32  Aligned_cols=98  Identities=28%  Similarity=0.351  Sum_probs=86.3

Q ss_pred             eeeeecc---ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK---LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||   +|.++ .......+++..++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       174 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~  250 (429)
T 3kvw_A          174 ICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSC  250 (429)
T ss_dssp             EEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred             EEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccce
Confidence            4799999   55555 3333456999999999999999999999998   999999999999975               


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCC
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN  103 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~  103 (216)
                                   .|+|||++.+..++.++|||||||++|||++|.+||....
T Consensus       251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~  303 (429)
T 3kvw_A          251 YEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED  303 (429)
T ss_dssp             ETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence                         1999999999999999999999999999999999987654

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.94  E-value=7.8e-27  Score=192.01  Aligned_cols=163  Identities=20%  Similarity=0.252  Sum_probs=114.1

Q ss_pred             ceeeeecc---cccccc-cCCCCCCChHHHHHHHHHHHHHHHhhhcC-CCCCeecCCCCCCceeec------C-------
Q 040682            2 CKKLVYSK---LLDAAN-IDKKRLLDWQVRARIIEGIAQGLLYLHQY-SRLRIIHRDLKASNILLD------S-------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~~~iiH~dik~~nil~~------~-------   63 (216)
                      ..++||||   +|.++. ......+++..+..++.|++.||+|||++ +   |+||||||+|||++      .       
T Consensus       104 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~~~~~kl~  180 (373)
T 1q8y_A          104 HVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQIKIA  180 (373)
T ss_dssp             EEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEEEEEEC
T ss_pred             eEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcCcceEEEc
Confidence            35899999   666663 33445699999999999999999999998 8   99999999999993      1       


Q ss_pred             -------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc----chhhhhhhh----
Q 040682           64 -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF----NLLGHAWDL----  116 (216)
Q Consensus        64 -------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~----~~~~~~~~~----  116 (216)
                                         .|+|||++.+..++.++|||||||++|||++|..||........    .........    
T Consensus       181 Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  260 (373)
T 1q8y_A          181 DLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGEL  260 (373)
T ss_dssp             CCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSC
T ss_pred             ccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCC
Confidence                               29999999999999999999999999999999999976543221    000010000    


Q ss_pred             --------------hccCcccccccc-c--------cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          117 --------------WKDDRVHELIDP-V--------ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       117 --------------~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                                    +........+.. .        ......+......+.+++.+||+.||++|||+.|++++
T Consensus       261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  334 (373)
T 1q8y_A          261 PSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  334 (373)
T ss_dssp             CHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             CHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence                          000000000000 0        00011233467889999999999999999999999863

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.94  E-value=4.9e-27  Score=189.79  Aligned_cols=159  Identities=21%  Similarity=0.258  Sum_probs=111.9

Q ss_pred             eeeeecc---ccccccc-----CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----------
Q 040682            3 KKLVYSK---LLDAANI-----DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----------   63 (216)
                      .++||||   +|.++..     .....+++..+..++.|++.||+|||+++   |+||||||+||+++.           
T Consensus        78 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~  154 (317)
T 2pmi_A           78 LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGL  154 (317)
T ss_dssp             EEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSS
T ss_pred             EEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCcc
Confidence            5899999   5555521     22346899999999999999999999998   999999999999965           


Q ss_pred             ------------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc---Cc
Q 040682           64 ------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD---DR  121 (216)
Q Consensus        64 ------------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~---~~  121 (216)
                                        .|+|||++.+. .++.++|||||||++|+|++|..||........  ..........   ..
T Consensus       155 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~  232 (317)
T 2pmi_A          155 ARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ--LKLIFDIMGTPNESL  232 (317)
T ss_dssp             CEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCTTT
T ss_pred             ceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCChhH
Confidence                              29999999864 689999999999999999999999975443211  1111110000   00


Q ss_pred             cc-----cccccccc-----------cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          122 VH-----ELIDPVIT-----------QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       122 ~~-----~~~~~~~~-----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ..     ....+...           ...........+.+++.+||+.||++|||+.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             CGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            00     00000000           00000113457899999999999999999998875

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.94  E-value=3.6e-27  Score=192.30  Aligned_cols=144  Identities=19%  Similarity=0.250  Sum_probs=110.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|.++.. ..+.+++.+++.++.|++.||+|||+++   |+||||||+||+++.                
T Consensus        84 ~~lv~E~~~g~l~~~l~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~  159 (336)
T 3h4j_B           84 IVMVIEYAGGELFDYIV-EKKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMT  159 (336)
T ss_dssp             EEEEECCCCEEHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred             EEEEEECCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence            5899999   4444422 2356999999999999999999999998   999999999999975                


Q ss_pred             ------------CCCChhhhhcCCC-CcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 ------------GYMPPEYALRGFF-SIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~-~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                  .|+|||++.+..+ +.++|||||||++|+|++|..||........               ...+....
T Consensus       160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---------------~~~i~~~~  224 (336)
T 3h4j_B          160 DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL---------------FKKVNSCV  224 (336)
T ss_dssp             TSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC---------------BCCCCSSC
T ss_pred             CCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH---------------HHHHHcCC
Confidence                        2999999988765 6899999999999999999999864332211               00000000


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        ...+...+..+.+++.+||+.||.+|||+.|+++.
T Consensus       225 --~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          225 --YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             --CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             --CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence              00111144568899999999999999999999753

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=2.2e-27  Score=196.90  Aligned_cols=158  Identities=23%  Similarity=0.246  Sum_probs=112.4

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .|+||||   +|..+...  +.+++..+..++.|++.||+|||+++   |+||||||+|||++.+               
T Consensus        86 ~~lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  160 (388)
T 3oz6_A           86 VYLVFDYMETDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFV  160 (388)
T ss_dssp             EEEEEECCSEEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred             EEEEecccCcCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence            5899999   55555332  46899999999999999999999999   9999999999999641               


Q ss_pred             -----------------------------------CCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc
Q 040682           65 -----------------------------------YMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN  108 (216)
Q Consensus        65 -----------------------------------y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~  108 (216)
                                                         |+|||++.+ ..++.++||||+||++|||++|++||.+...... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-  239 (388)
T 3oz6_A          161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ-  239 (388)
T ss_dssp             SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-
T ss_pred             ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence                                               899999987 5789999999999999999999999975442211 


Q ss_pred             hhhhhhhhhccC---cccccccc------------------ccccc-----------hhhHHHHHHHHHHHHhccccCCC
Q 040682          109 LLGHAWDLWKDD---RVHELIDP------------------VITQD-----------EISLSMLMRYVKVALLCVQETVA  156 (216)
Q Consensus       109 ~~~~~~~~~~~~---~~~~~~~~------------------~~~~~-----------~~~~~~~~~~~~l~~~cl~~~p~  156 (216)
                       ...+.......   .+.....+                  .....           .....+...+.+++.+||+.||+
T Consensus       240 -~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~  318 (388)
T 3oz6_A          240 -LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN  318 (388)
T ss_dssp             -HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred             -HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence             11111000000   00000000                  00000           00001356789999999999999


Q ss_pred             CCCCHHHHHHH
Q 040682          157 DRPTMSDVVSM  167 (216)
Q Consensus       157 ~Rps~~evl~~  167 (216)
                      +|||+.|++++
T Consensus       319 ~R~t~~e~l~H  329 (388)
T 3oz6_A          319 KRISANDALKH  329 (388)
T ss_dssp             GSCCHHHHTTS
T ss_pred             cCCCHHHHhCC
Confidence            99999999865

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.94  E-value=4.1e-27  Score=194.55  Aligned_cols=148  Identities=23%  Similarity=0.229  Sum_probs=114.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec--C-------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD--S-------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~--~-------------   63 (216)
                      .+|||||    +|.++.......+++.+++.++.|++.||+|||+++   |+||||||+|||+.  .             
T Consensus       161 ~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~  237 (373)
T 2x4f_A          161 IVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLAR  237 (373)
T ss_dssp             EEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCE
T ss_pred             EEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCce
Confidence            5899999    566654555567999999999999999999999998   99999999999983  2             


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||++.+..++.++|||||||++|||++|..||........  ....   .... .      
T Consensus       238 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~~~i---~~~~-~------  305 (373)
T 2x4f_A          238 RYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET--LNNI---LACR-W------  305 (373)
T ss_dssp             ECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHH---HHTC-C------
T ss_pred             ecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHH---Hhcc-C------
Confidence                           29999999988999999999999999999999999865432211  1110   1000 0      


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ........ ..+..+.+++.+||+.+|.+||++.|+++
T Consensus       306 ~~~~~~~~-~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          306 DLEDEEFQ-DISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             CSCSGGGT-TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCChhhhc-cCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            00111111 14567899999999999999999999986

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.94  E-value=1.5e-27  Score=195.59  Aligned_cols=147  Identities=22%  Similarity=0.269  Sum_probs=111.7

Q ss_pred             eeeeecc----ccccccc---CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANI---DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .|+||||    +|.+...   .....+++..+..++.|++.||+|||+++   |+||||||+|||++.            
T Consensus       101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Df  177 (351)
T 3c0i_A          101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGF  177 (351)
T ss_dssp             EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred             EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecC
Confidence            5899999    5544422   23345899999999999999999999998   999999999999953            


Q ss_pred             --------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 --------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 --------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                          .|+|||++.+..++.++|||||||++|+|++|..||.....   ..    ......... 
T Consensus       178 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~----~~~i~~~~~-  249 (351)
T 3c0i_A          178 GVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RL----FEGIIKGKY-  249 (351)
T ss_dssp             TTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---HH----HHHHHHTCC-
T ss_pred             cceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---HH----HHHHHcCCC-
Confidence                                19999999999999999999999999999999999864211   11    111100100 


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                           ......+. ..+..+.+++.+||+.||++||++.|+++
T Consensus       250 -----~~~~~~~~-~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          250 -----KMNPRQWS-HISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             -----CCCHHHHT-TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -----CCCccccc-cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                 00000111 14567899999999999999999999985

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.94  E-value=4e-27  Score=197.40  Aligned_cols=160  Identities=21%  Similarity=0.214  Sum_probs=114.1

Q ss_pred             eeeeecc---ccccc---ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK---LLDAA---NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      .++||||   .+.++   .......+++..++.++.|++.||+|||+++   |+||||||+|||++.             
T Consensus       128 ~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a  204 (420)
T 1j1b_A          128 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA  204 (420)
T ss_dssp             EEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhh
Confidence            4689999   44333   1234567999999999999999999999998   999999999999974             


Q ss_pred             ----------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc--------
Q 040682           64 ----------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK--------  118 (216)
Q Consensus        64 ----------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~--------  118 (216)
                                      .|+|||++.+. .++.++|||||||++|||++|+.||........  ...+.....        
T Consensus       205 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~--l~~i~~~lg~p~~~~~~  282 (420)
T 1j1b_A          205 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ--LVEIIKVLGTPTREQIR  282 (420)
T ss_dssp             EECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCSCCHHHHH
T ss_pred             hhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHH
Confidence                            29999999775 799999999999999999999999975432211  111100000        


Q ss_pred             --cCccccccccccccchhh----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          119 --DDRVHELIDPVITQDEIS----LSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       119 --~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        .....+..-+.+....+.    ...+..+.+|+.+||+.||.+||++.|++++
T Consensus       283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence              000111111111111111    1135678999999999999999999999853

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.94  E-value=1.2e-27  Score=194.48  Aligned_cols=144  Identities=22%  Similarity=0.248  Sum_probs=111.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .|+||||    +|.++.. ..+.+++.++..++.|++.||+|||+++   |+||||||+||+++.+              
T Consensus        89 ~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  164 (328)
T 3fe3_A           89 LYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEF  164 (328)
T ss_dssp             EEEEECCCTTCBHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred             EEEEEECCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence            5899999    5555532 2356999999999999999999999998   9999999999999752              


Q ss_pred             --------------CCChhhhhcCCCC-cchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           65 --------------YMPPEYALRGFFS-IKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        65 --------------y~aPE~~~~~~~~-~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    |+|||++.+..+. .++||||+||++|+|++|..||.......  ....    .....      ..
T Consensus       165 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~----i~~~~------~~  232 (328)
T 3fe3_A          165 TVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE--LRER----VLRGK------YR  232 (328)
T ss_dssp             SSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH----HHHCC------CC
T ss_pred             CCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH--HHHH----HHhCC------CC
Confidence                          9999999988775 78999999999999999999986433211  1111    10110      01


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .+     ...+..+.+++.+||+.||.+|||+.|++++
T Consensus       233 ~p-----~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          233 IP-----FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             CC-----TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             CC-----CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            11     1134568899999999999999999998764

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.94  E-value=3.7e-27  Score=196.14  Aligned_cols=144  Identities=24%  Similarity=0.298  Sum_probs=108.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|..+. ...+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       128 ~~lV~E~~~gg~L~~~l-~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~  203 (396)
T 4dc2_A          128 LFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  203 (396)
T ss_dssp             EEEEEECCTTCBHHHHH-HHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEEEEcCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeec
Confidence            5899999    554443 23456999999999999999999999999   999999999999965               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc---chhhhhhhhhccCcccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF---NLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  126 (216)
                                    .|+|||++.+..++.++|||||||++|||++|..||........   ..............     
T Consensus       204 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-----  278 (396)
T 4dc2_A          204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-----  278 (396)
T ss_dssp             CCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-----
T ss_pred             ccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-----
Confidence                          29999999999999999999999999999999999965432221   11111111111110     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTM  161 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  161 (216)
                       ...     +...+..+.+++.+||+.||++||++
T Consensus       279 -~~~-----p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          279 -IRI-----PRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             -CCC-----CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             -cCC-----CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence             011     11145578999999999999999996

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.94  E-value=1.2e-26  Score=192.19  Aligned_cols=98  Identities=29%  Similarity=0.376  Sum_probs=84.8

Q ss_pred             eeeeecc---ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhc--CCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK---LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQ--YSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~--~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      .++||||   +|.++.. ...+.+++..+..++.|++.||+|||+  .+   |+||||||+|||++.             
T Consensus       131 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~---ivHrDlkp~NIll~~~~~~~~kL~DFG~  207 (382)
T 2vx3_A          131 LCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS---IIHCDLKPENILLCNPKRSAIKIVDFGS  207 (382)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC---EECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred             eEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC---EEcCCCCcccEEEecCCCCcEEEEeccC
Confidence            5799999   6666533 333569999999999999999999995  45   999999999999942             


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCC
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN  103 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~  103 (216)
                                     .|+|||++.+..++.++|||||||++|||++|..||....
T Consensus       208 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  262 (382)
T 2vx3_A          208 SCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             CEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                           1999999999999999999999999999999999997544

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.94  E-value=2.3e-27  Score=193.33  Aligned_cols=152  Identities=18%  Similarity=0.197  Sum_probs=101.5

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++... ....+++.+++.++.|++.||+|||+++   ++||||||+||+++.              
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~  177 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGF  177 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEecccc
Confidence            5899999    66666333 3357999999999999999999999998   999999999999963              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||.+.+..++.++||||||+++|+|++|..||............  .......      .
T Consensus       178 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--~~~~~~~------~  249 (336)
T 3fhr_A          178 AKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM--KRRIRLG------Q  249 (336)
T ss_dssp             CEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------
T ss_pred             ceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH--HHhhhcc------c
Confidence                            299999998888999999999999999999999998654432210000  0000000      0


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ........ ...+..+.+++.+||+.+|++||++.|+++
T Consensus       250 ~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          250 YGFPNPEW-SEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             -CCCTTTS-TTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cccCchhh-ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            00011111 114567899999999999999999999997

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.94  E-value=5.7e-27  Score=194.96  Aligned_cols=160  Identities=20%  Similarity=0.220  Sum_probs=113.2

Q ss_pred             eeeeecc---ccccc---ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec-C------------
Q 040682            3 KKLVYSK---LLDAA---NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD-S------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~-~------------   63 (216)
                      .++||||   .+...   .......+++..++.++.|++.||+|||+++   |+||||||+|||++ .            
T Consensus       113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a  189 (394)
T 4e7w_A          113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSA  189 (394)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence            5799999   33222   2233567999999999999999999999998   99999999999997 2            


Q ss_pred             ----------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc--------
Q 040682           64 ----------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK--------  118 (216)
Q Consensus        64 ----------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~--------  118 (216)
                                      .|+|||++.+. .++.++||||+||++|||++|+.||.+......  .........        
T Consensus       190 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~p~~~~~~  267 (394)
T 4e7w_A          190 KILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ--LVEIIKVLGTPSREQIK  267 (394)
T ss_dssp             EECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHH
T ss_pred             ccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHH
Confidence                            19999999775 589999999999999999999999976442211  000000000        


Q ss_pred             --cCccccccccccccch----hhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          119 --DDRVHELIDPVITQDE----ISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       119 --~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        .....+..-+......    .....+..+.+++.+||+.||++||++.|++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence              0000000001111111    111145679999999999999999999999864

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.94  E-value=6.4e-27  Score=188.13  Aligned_cols=161  Identities=19%  Similarity=0.233  Sum_probs=113.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|..+ ....+.+++..+..++.|++.||+|||+++   ++|+||||+||+++.+              
T Consensus        77 ~~lv~e~~~~~~l~~~-~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  152 (311)
T 4agu_A           77 LHLVFEYCDHTVLHEL-DRYQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLL  152 (311)
T ss_dssp             EEEEEECCSEEHHHHH-HHTSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCchHHHH-HhhhcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhc
Confidence            5899999    55555 333456999999999999999999999998   9999999999999751              


Q ss_pred             ---------------CCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccch-hhh--------hhhhhcc
Q 040682           65 ---------------YMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNL-LGH--------AWDLWKD  119 (216)
Q Consensus        65 ---------------y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~-~~~--------~~~~~~~  119 (216)
                                     |+|||.+.+ ..++.++||||||+++|++++|..||.......... ...        ....+..
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (311)
T 4agu_A          153 TGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST  232 (311)
T ss_dssp             C------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHT
T ss_pred             cCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccc
Confidence                           899999986 578999999999999999999999986544322100 000        0000000


Q ss_pred             Cccc---ccccccccc--chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          120 DRVH---ELIDPVITQ--DEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       120 ~~~~---~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ....   ...++....  .......+..+.+++.+||+.||++|||+.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             CGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             ccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            0000   000000000  00001145678999999999999999999999854

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.94  E-value=4e-27  Score=187.34  Aligned_cols=147  Identities=27%  Similarity=0.437  Sum_probs=110.1

Q ss_pred             eeeeecc---ccccc---ccCCCCCCChHHHHHHHHHHHHHHHhhhcC-CCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK---LLDAA---NIDKKRLLDWQVRARIIEGIAQGLLYLHQY-SRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++||||   +|.++   .......+++.+++.++.|++.||+|||++ +   ++||||||+||+++.            
T Consensus        81 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~  157 (290)
T 3fme_A           81 VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGIS  157 (290)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC---
T ss_pred             EEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCc
Confidence            5899999   55444   223456799999999999999999999997 8   999999999999976            


Q ss_pred             ----------------CCCChhhh----hcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 ----------------GYMPPEYA----LRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 ----------------~y~aPE~~----~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                      .|+|||.+    .+..++.++||||||+++|++++|..||..........    .......   
T Consensus       158 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~---  230 (290)
T 3fme_A          158 GYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL----KQVVEEP---  230 (290)
T ss_dssp             ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH----HHHHHSC---
T ss_pred             ccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHH----HHHhccC---
Confidence                            29999996    45578999999999999999999999986432211111    1111110   


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                         .+.....    ..+..+.+++.+||+.+|++|||+.|+++
T Consensus       231 ---~~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          231 ---SPQLPAD----KFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             ---CCCCCTT----TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ---CCCcccc----cCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence               0111111    14557899999999999999999999976

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=6e-27  Score=191.44  Aligned_cols=161  Identities=22%  Similarity=0.248  Sum_probs=115.9

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|..+.......+++.++..++.|++.||+|||+++   |+||||||+||+++.                
T Consensus        87 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (346)
T 1ua2_A           87 ISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFG  163 (346)
T ss_dssp             CEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             eEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence            5799999   666665555667999999999999999999999999   999999999999975                


Q ss_pred             -------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc---Ccc----
Q 040682           64 -------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD---DRV----  122 (216)
Q Consensus        64 -------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~----  122 (216)
                                   .|+|||++.+. .++.++|||||||++|+|++|.+||.......  ...........   ...    
T Consensus       164 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~  241 (346)
T 1ua2_A          164 SPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD--QLTRIFETLGTPTEEQWPDMC  241 (346)
T ss_dssp             SCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCCCCTTTSSSTT
T ss_pred             CCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHcCCCChhhhhhhc
Confidence                         29999999765 58899999999999999999999886543211  11111111000   000    


Q ss_pred             --ccccc----cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 040682          123 --HELID----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMI  168 (216)
Q Consensus       123 --~~~~~----~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L  168 (216)
                        ...+.    +..+........+..+.+++.+||+.||++|||+.|++++-
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~  293 (346)
T 1ua2_A          242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK  293 (346)
T ss_dssp             SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred             cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence              00000    00000001112456799999999999999999999998653

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.94  E-value=1.9e-27  Score=194.02  Aligned_cols=144  Identities=18%  Similarity=0.206  Sum_probs=112.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. ...+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        80 ~~lv~E~~~gg~L~~~l-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  155 (337)
T 1o6l_A           80 LCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             EEEEEECCTTCBHHHHH-HHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EEEEEeCCCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence            5899999    555443 23456899999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|||++|..||.......  ....    .....      ..
T Consensus       156 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~----i~~~~------~~  223 (337)
T 1o6l_A          156 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFEL----ILMEE------IR  223 (337)
T ss_dssp             CCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH----HHHCC------CC
T ss_pred             ccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH--HHHH----HHcCC------CC
Confidence                          2999999999999999999999999999999999986432211  1111    10110      01


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                      .+     ...+..+.+++.+||+.+|++||     ++.|++++
T Consensus       224 ~p-----~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          224 FP-----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             CC-----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CC-----CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            11     11455789999999999999999     89888764

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.94  E-value=2e-26  Score=182.12  Aligned_cols=146  Identities=22%  Similarity=0.296  Sum_probs=112.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. .....+++.++..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        80 ~~lv~e~~~~~~L~~~l-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  155 (276)
T 2yex_A           80 QYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVF  155 (276)
T ss_dssp             EEEEEECCTTEEGGGGS-BTTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCcHHHHH-hhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence            5899999    666663 33456999999999999999999999998   999999999999975               


Q ss_pred             ----------------CCCChhhhhcCCC-CcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFF-SIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~-~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||.+.+..+ +.++||||||+++|++++|..||............+     .....  ..
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~--~~  228 (276)
T 2yex_A          156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT--YL  228 (276)
T ss_dssp             EETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHH-----HTTCT--TS
T ss_pred             CCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHh-----hhccc--cc
Confidence                            1899999987765 678999999999999999999997654332211111     11000  00


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                            ... ...+..+.+++.+||+.+|++||++.|+++
T Consensus       229 ------~~~-~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          229 ------NPW-KKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             ------TTG-GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ------Cch-hhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence                  001 114456889999999999999999998875

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.94  E-value=2.1e-27  Score=191.40  Aligned_cols=154  Identities=19%  Similarity=0.280  Sum_probs=113.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++... .+.+++.+++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        86 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~  161 (316)
T 2ac3_A           86 FYLVFEKMRGGSILSHIHK-RRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLG  161 (316)
T ss_dssp             EEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred             EEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence            5899999    56555332 356899999999999999999999998   999999999999853               


Q ss_pred             ------------------------CCCChhhhhc-----CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchh----
Q 040682           64 ------------------------GYMPPEYALR-----GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLL----  110 (216)
Q Consensus        64 ------------------------~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~----  110 (216)
                                              .|+|||++.+     ..++.++|||||||++|+|++|..||...........    
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~  241 (316)
T 2ac3_A          162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA  241 (316)
T ss_dssp             C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred             cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence                                    1899999875     4578999999999999999999999976544331100    


Q ss_pred             -----hhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          111 -----GHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       111 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                           ...........      ...+.... ...+..+.+++.+||+.||++||++.|++++
T Consensus       242 ~~~~~~~~~~~i~~~~------~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          242 CPACQNMLFESIQEGK------YEFPDKDW-AHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             CHHHHHHHHHHHHHCC------CCCCHHHH-TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             chhHHHHHHHHHhccC------cccCchhc-ccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence                 00011110100      00000000 1145678999999999999999999999873

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.94  E-value=4.9e-27  Score=190.72  Aligned_cols=159  Identities=23%  Similarity=0.293  Sum_probs=113.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+ ......+++..+..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        99 ~~lv~e~~~~~~l~~~-~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  174 (331)
T 4aaa_A           99 WYLVFEFVDHTILDDL-ELFPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTL  174 (331)
T ss_dssp             EEEEEECCSEEHHHHH-HHSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred             EEEEEecCCcchHHHH-HhhccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceee
Confidence            5899999    55554 333456999999999999999999999998   999999999999965               


Q ss_pred             --------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchh---------hhhhhhhc-
Q 040682           64 --------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLL---------GHAWDLWK-  118 (216)
Q Consensus        64 --------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~---------~~~~~~~~-  118 (216)
                                    .|+|||.+.+. .++.++|||||||++|+|++|..||...........         ......+. 
T Consensus       175 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (331)
T 4aaa_A          175 AAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNK  254 (331)
T ss_dssp             ---------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred             cCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhh
Confidence                          29999999876 789999999999999999999999865443221000         00000000 


Q ss_pred             -----cCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          119 -----DDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       119 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                           ............. .......+..+.+++.+||+.||++||++.|+++
T Consensus       255 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          255 NPVFAGVRLPEIKEREPL-ERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             CGGGTTCCCCCCSSCCCH-HHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccccccccCccccccchh-hhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                 0011111111000 0111124677999999999999999999999885

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.94  E-value=5.4e-27  Score=190.49  Aligned_cols=158  Identities=18%  Similarity=0.206  Sum_probs=111.8

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   +|.++.. ....+++.+++.++.|++.||+|||+++   |+||||||+|||++.                
T Consensus       108 ~~lv~e~~~~~L~~~~~-~~~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~  183 (329)
T 3gbz_A          108 LHLIFEYAENDLKKYMD-KNPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGL  183 (329)
T ss_dssp             EEEEEECCSEEHHHHHH-HCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred             EEEEEecCCCCHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence            5899999   6665533 3345899999999999999999999998   999999999999931                


Q ss_pred             ------------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc---cCc
Q 040682           64 ------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK---DDR  121 (216)
Q Consensus        64 ------------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~---~~~  121 (216)
                                        .|+|||++.+. .++.++|||||||++|+|++|..||........  .........   ...
T Consensus       184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~  261 (329)
T 3gbz_A          184 ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ--LFKIFEVLGLPDDTT  261 (329)
T ss_dssp             HHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTT
T ss_pred             ccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH--HHHHHHHhCCCchhh
Confidence                              29999999875 589999999999999999999999865432211  111100000   000


Q ss_pred             cccc--------cccccccc----hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          122 VHEL--------IDPVITQD----EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       122 ~~~~--------~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ....        ..+.....    .........+.+++.+||+.||++|||+.|+++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            0000        00000000    011113467899999999999999999999986

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.94  E-value=2.5e-26  Score=185.72  Aligned_cols=159  Identities=21%  Similarity=0.253  Sum_probs=114.8

Q ss_pred             eeeeecc---cccccc-cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK---LLDAAN-IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||   +|.++. ......+++.+++.++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        94 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  170 (326)
T 1blx_A           94 LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY  170 (326)
T ss_dssp             EEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred             EEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecCcccccc
Confidence            5899999   666663 333445999999999999999999999998   999999999999965               


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc---cCcccc---
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK---DDRVHE---  124 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---  124 (216)
                                   .|+|||++.+..++.++||||||+++|+|++|..||........  .........   ......   
T Consensus       171 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~  248 (326)
T 1blx_A          171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ--LGKILDVIGLPGEEDWPRDVA  248 (326)
T ss_dssp             CGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCGGGSCTTCS
T ss_pred             cCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHHHcCCCCcccCccccc
Confidence                         29999999999999999999999999999999999865432211  111111000   000000   


Q ss_pred             ----ccc--cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          125 ----LID--PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       125 ----~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                          .+.  ............+..+.+++.+||+.+|++||++.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                000  000000111124567899999999999999999999985

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.94  E-value=4.8e-27  Score=187.21  Aligned_cols=148  Identities=22%  Similarity=0.342  Sum_probs=111.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec-C--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD-S--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~-~--------------   63 (216)
                      .++||||    +|.++.. ....+++..++.++.|++.||+|||+++ .+++|+||||+||+++ .              
T Consensus       104 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~  181 (290)
T 1t4h_A          104 IVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EEEEEEecCCCCHHHHHH-HccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence            5899999    6666633 2356899999999999999999999974 4599999999999997 2              


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                   .|+|||.+.+ .++.++||||||+++|+|++|..||........    . ........     .+  
T Consensus       182 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~----~-~~~~~~~~-----~~--  248 (290)
T 1t4h_A          182 KRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ----I-YRRVTSGV-----KP--  248 (290)
T ss_dssp             CCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH----H-HHHHTTTC-----CC--
T ss_pred             ccccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH----H-HHHHhccC-----Cc--
Confidence                         2999998764 589999999999999999999999864332111    1 11111110     01  


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        ...+......+.+++..||+.+|++||++.|++++
T Consensus       249 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          249 --ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             --GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             --cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence              11111134568999999999999999999999863

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.94  E-value=1e-26  Score=188.07  Aligned_cols=144  Identities=21%  Similarity=0.223  Sum_probs=109.1

Q ss_pred             eeeeecc----cccccccC--CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK----LLDAANID--KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      .++||||    +|.++...  .....++..++.++.|++.||+|||+++   |+||||||+||+++.             
T Consensus       136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~  212 (332)
T 3qd2_B          136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVT  212 (332)
T ss_dssp             EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCccc
Confidence            6899999    67776332  2234567789999999999999999998   999999999999973             


Q ss_pred             ----------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh
Q 040682           64 ----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD  115 (216)
Q Consensus        64 ----------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~  115 (216)
                                                  .|+|||.+.+..++.++||||||+++|+|++|..++...       . ....
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~-~~~~  284 (332)
T 3qd2_B          213 AMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------V-RIIT  284 (332)
T ss_dssp             ECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------H-HHHH
T ss_pred             ccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------H-HHHH
Confidence                                        189999999999999999999999999999987663100       0 0000


Q ss_pred             hhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          116 LWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..        ....  ...........+.+++.+||+.+|++||++.|++++
T Consensus       285 ~~--------~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          285 DV--------RNLK--FPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HH--------HTTC--CCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             Hh--------hccC--CCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence            00        0011  111122255677999999999999999999999863

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.94  E-value=1.9e-26  Score=193.21  Aligned_cols=149  Identities=21%  Similarity=0.234  Sum_probs=111.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. ...+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       214 ~~lv~e~~~~g~L~~~l-~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DFG~a  289 (419)
T 3i6u_A          214 YYIVLELMEGGELFDKV-VGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS  289 (419)
T ss_dssp             EEEEEECCTTCBGGGGT-SSSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred             eEEEEEcCCCCcHHHHH-hccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeecccc
Confidence            4799999    555553 33456999999999999999999999998   999999999999953               


Q ss_pred             ----------------CCCChhhhhc---CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 ----------------GYMPPEYALR---GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 ----------------~y~aPE~~~~---~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                      .|+|||++.+   ..++.++|||||||++|+|++|..||........ ....    ....... 
T Consensus       290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~----i~~~~~~-  363 (419)
T 3i6u_A          290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQ----ITSGKYN-  363 (419)
T ss_dssp             TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-HHHH----HHTTCCC-
T ss_pred             eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-HHHH----HhcCCCC-
Confidence                            2999999864   5688999999999999999999999865433221 1111    1011000 


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                           ... ......+..+.+++.+||+.+|++||++.|++++
T Consensus       364 -----~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          364 -----FIP-EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             -----CCH-HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -----CCc-hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence                 000 1111145678999999999999999999998863

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.94  E-value=8.5e-27  Score=186.44  Aligned_cols=154  Identities=28%  Similarity=0.400  Sum_probs=112.1

Q ss_pred             eeeeecc----ccccccc-------CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------
Q 040682            3 KKLVYSK----LLDAANI-------DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------   63 (216)
                      .++||||    +|.++..       .....+++.+++.++.|++.||+|||+++   ++|+||||+||+++.        
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~d  164 (303)
T 2vwi_A           88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIAD  164 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECC
T ss_pred             cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEe
Confidence            5899999    6666532       13456999999999999999999999998   999999999999964        


Q ss_pred             --------------------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhh
Q 040682           64 --------------------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDL  116 (216)
Q Consensus        64 --------------------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~  116 (216)
                                                .|+|||.+.+ ..++.++||||||+++|+|++|..||.........     ...
T Consensus       165 fg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~  239 (303)
T 2vwi_A          165 FGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-----MLT  239 (303)
T ss_dssp             CHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH-----HHH
T ss_pred             ccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHH-----HHH
Confidence                                      2999999876 47899999999999999999999998654332210     000


Q ss_pred             hccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          117 WKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .... .... .............+..+.+++.+||+.+|++||++.++++
T Consensus       240 ~~~~-~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          240 LQND-PPSL-ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             HTSS-CCCT-TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hccC-CCcc-ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            1000 0000 0000000001113457899999999999999999999976

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.94  E-value=1.5e-26  Score=189.89  Aligned_cols=160  Identities=19%  Similarity=0.189  Sum_probs=115.5

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .|+||||   +|.+........+++.++..++.|++.||+|||+++   |+|+||||+||+++.+               
T Consensus       109 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  185 (362)
T 3pg1_A          109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDT  185 (362)
T ss_dssp             EEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCTTC-----
T ss_pred             EEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCCCEEEEecCcccccc
Confidence            4899999   666665556667999999999999999999999998   9999999999999751               


Q ss_pred             -------------CCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc---------
Q 040682           65 -------------YMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR---------  121 (216)
Q Consensus        65 -------------y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------  121 (216)
                                   |+|||++.+ ..++.++|||||||++|++++|+.||........  ............         
T Consensus       186 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~  263 (362)
T 3pg1_A          186 ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ--LNKIVEVVGTPKIEDVVMFSS  263 (362)
T ss_dssp             ----------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCHHHHHHTSC
T ss_pred             cccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHcCCCChHHhhhccc
Confidence                         899999887 6789999999999999999999999865432111  111110000000         


Q ss_pred             ------cccccccccc--cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          122 ------VHELIDPVIT--QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       122 ------~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                            ..........  ...........+.+++.+||+.+|++|||+.|++++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          264 PSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence                  0000000000  001111235678999999999999999999999853

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.94  E-value=8.2e-27  Score=189.00  Aligned_cols=156  Identities=17%  Similarity=0.198  Sum_probs=110.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|..+.    +.+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       108 ~~lv~e~~~~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~  180 (330)
T 3nsz_A          108 PALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF  180 (330)
T ss_dssp             EEEEEECCCCCCHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             eEEEEeccCchhHHHHH----HhCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence            5899999    444443    24899999999999999999999998   999999999999974               


Q ss_pred             --------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhh--------hhhhccC
Q 040682           64 --------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHA--------WDLWKDD  120 (216)
Q Consensus        64 --------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~--------~~~~~~~  120 (216)
                                    .|+|||.+.+ ..++.++|||||||++|+|++|..||..............        .......
T Consensus       181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  260 (330)
T 3nsz_A          181 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY  260 (330)
T ss_dssp             CCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred             cCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence                          1899999987 5789999999999999999999999854433211110000        0000000


Q ss_pred             c--------------cccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          121 R--------------VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       121 ~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .              .......... .......+..+.+++.+||+.||++|||+.|+++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          261 NIELDPRFNDILGRHSRKRWERFVH-SENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             TCCCCTHHHHHHCCCCCCCGGGGCC-TTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ccccccchhhhhhhccccchhhhcc-ccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0              0000000000 1111114567899999999999999999999986

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.94  E-value=4.4e-27  Score=188.24  Aligned_cols=147  Identities=21%  Similarity=0.333  Sum_probs=113.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|+++.....+.+++.++..++.|++.||.|||+++   ++|+||||+||+++.+              
T Consensus        91 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  167 (302)
T 2j7t_A           91 LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKN  167 (302)
T ss_dssp             EEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred             EEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence            5899999    666665555567999999999999999999999998   9999999999999752              


Q ss_pred             ---------------CCChhhhh-----cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           65 ---------------YMPPEYAL-----RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        65 ---------------y~aPE~~~-----~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                     |+|||.+.     +..++.++||||||+++|+|++|..||.......     ......... .  
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~-~--  239 (302)
T 2j7t_A          168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-----VLLKIAKSD-P--  239 (302)
T ss_dssp             HHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSC-C--
T ss_pred             cccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-----HHHHHhccC-C--
Confidence                           99999984     5678899999999999999999999986433211     101111000 0  


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                         +..   ..+...+..+.+++.+||+.+|++||++.++++
T Consensus       240 ---~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          240 ---PTL---LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             ---CCC---SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             ---ccc---CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence               000   011114567899999999999999999998875

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.94  E-value=3.2e-26  Score=193.71  Aligned_cols=89  Identities=26%  Similarity=0.381  Sum_probs=77.4

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .|+||||   +|.++. .....+++..++.++.||+.||+|||+++   |+||||||+|||++.+               
T Consensus       132 ~~lv~e~~~~~L~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          132 LYVVLEIADSDFKKLF-RTPVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             EEEEECCCSEEHHHHH-HSSCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred             EEEEEeccccchhhhc-ccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhcc
Confidence            5899999   555553 33456999999999999999999999998   9999999999999641               


Q ss_pred             -----------------------------------------CCChhhhh-cCCCCcchhhhhHHHHHHHHHhC
Q 040682           65 -----------------------------------------YMPPEYAL-RGFFSIKSDVFSFGVLMLEILSG   95 (216)
Q Consensus        65 -----------------------------------------y~aPE~~~-~~~~~~~~Dv~s~G~~l~ell~g   95 (216)
                                                               |+|||++. +..++.++|||||||++|||++|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence                                                     99999864 55799999999999999999994

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.94  E-value=2.9e-27  Score=199.58  Aligned_cols=143  Identities=18%  Similarity=0.203  Sum_probs=111.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++. ...+.+++..+..++.|++.||+|||+ ++   |+||||||+|||++.              
T Consensus       223 ~~lv~e~~~~~~L~~~l-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~  298 (446)
T 4ejn_A          223 LCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKE  298 (446)
T ss_dssp             EEEEECCCSSCBHHHHH-HHHSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred             EEEEEeeCCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCcee
Confidence            5799999    555553 233569999999999999999999998 88   999999999999975              


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||++.+..++.++|||||||++|||++|..||.......  ....    .....      .
T Consensus       299 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~----i~~~~------~  366 (446)
T 4ejn_A          299 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFEL----ILMEE------I  366 (446)
T ss_dssp             TCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH----HHHCC------C
T ss_pred             ccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH--HHHH----HHhCC------C
Confidence                           2999999999999999999999999999999999986433211  1111    10010      0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVS  166 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~  166 (216)
                      ..+     ......+.+++.+||+.||++||     ++.|+++
T Consensus       367 ~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          367 RFP-----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             CCC-----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CCC-----ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            011     11345789999999999999999     9998875

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.93  E-value=1.3e-26  Score=191.90  Aligned_cols=159  Identities=17%  Similarity=0.205  Sum_probs=113.3

Q ss_pred             eeeeecc---ccccc---ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK---LLDAA---NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      .++||||   +|.+.   .....+.+++..++.++.|++.||+|||+++   |+||||||+||+++.             
T Consensus       113 ~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a  189 (383)
T 3eb0_A          113 LNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSA  189 (383)
T ss_dssp             EEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc---CccCccCHHHEEEcCCCCcEEEEECCCC
Confidence            5799999   54444   2244567999999999999999999999998   999999999999963             


Q ss_pred             ----------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc-------
Q 040682           64 ----------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD-------  119 (216)
Q Consensus        64 ----------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~-------  119 (216)
                                      .|+|||.+.+. .++.++||||+||++|||++|+.||........  ..........       
T Consensus       190 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~i~~~~g~p~~~~~~  267 (383)
T 3eb0_A          190 KKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQ--LVRIIQIMGTPTKEQMI  267 (383)
T ss_dssp             EECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHH
T ss_pred             cccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCCHHHHH
Confidence                            19999998875 589999999999999999999999975432221  1111000000       


Q ss_pred             ---Cccccccccccccch----hhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          120 ---DRVHELIDPVITQDE----ISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       120 ---~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                         ....+..-+......    .+...+..+.+++.+||+.+|++|||+.|+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          268 RMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             HHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence               000000001111111    11114556899999999999999999999984

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.93  E-value=1.7e-26  Score=190.60  Aligned_cols=157  Identities=20%  Similarity=0.207  Sum_probs=114.1

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   +|.+...   ..+++.++..++.|++.||+|||+++   |+||||||+||+++.                
T Consensus       105 ~~lv~e~~~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  178 (371)
T 2xrw_A          105 VYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG  178 (371)
T ss_dssp             EEEEEECCSEEHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred             eEEEEEcCCCCHHHHHh---hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence            5899999   5444432   35899999999999999999999998   999999999999975                


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh----------------
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD----------------  115 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~----------------  115 (216)
                                  .|+|||++.+..++.++|||||||++|+|++|..||........  ......                
T Consensus       179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~  256 (371)
T 2xrw_A          179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ--WNKVIEQLGTPCPEFMKKLQPT  256 (371)
T ss_dssp             -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHC-CCCCCHHHHTTSCHH
T ss_pred             cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHHhhhH
Confidence                        29999999999999999999999999999999999875432111  000000                


Q ss_pred             ---hhccC------cccccccccc--ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          116 ---LWKDD------RVHELIDPVI--TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       116 ---~~~~~------~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                         .....      .....+....  ............+.+++.+||+.||++|||+.|++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence               00000      0000000000  0111222346789999999999999999999999863

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.93  E-value=8.6e-27  Score=190.72  Aligned_cols=144  Identities=24%  Similarity=0.291  Sum_probs=108.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+.. ..+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        85 ~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~  160 (345)
T 3a8x_A           85 LFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  160 (345)
T ss_dssp             EEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred             EEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccc
Confidence            5899999    5555532 3356999999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc---chhhhhhhhhccCcccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF---NLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  126 (216)
                                    .|+|||++.+..++.++|||||||++|||++|..||........   ..............     
T Consensus       161 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~-----  235 (345)
T 3a8x_A          161 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-----  235 (345)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-----
T ss_pred             cCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-----
Confidence                          29999999999999999999999999999999999965322111   00111111111110     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTM  161 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  161 (216)
                       ...     +...+..+.+++.+||+.+|.+||++
T Consensus       236 -~~~-----p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          236 -IRI-----PRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             -CCC-----CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             -CCC-----CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence             011     11145578999999999999999996

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.93  E-value=1.4e-27  Score=196.05  Aligned_cols=143  Identities=24%  Similarity=0.269  Sum_probs=110.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. ...+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        99 ~~lv~E~~~gg~L~~~l-~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~  174 (353)
T 3txo_A           99 LFFVMEFVNGGDLMFHI-QKSRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG  174 (353)
T ss_dssp             EEEEEECCCSCBHHHHH-HHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EEEEEeCCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeec
Confidence            5899999    555543 23356999999999999999999999998   999999999999965               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|||++|..||.......  ....    .....      ..
T Consensus       175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--~~~~----i~~~~------~~  242 (353)
T 3txo_A          175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD--LFEA----ILNDE------VV  242 (353)
T ss_dssp             CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH----HHHCC------CC
T ss_pred             ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH--HHHH----HHcCC------CC
Confidence                          2999999999899999999999999999999999986433211  1111    11110      00


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCH------HHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTM------SDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~------~evl~  166 (216)
                      .     +......+.+++.+||+.+|.+||++      .|+++
T Consensus       243 ~-----p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          243 Y-----PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             C-----CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             C-----CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            1     11134568899999999999999998      66664

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.93  E-value=5.9e-27  Score=189.67  Aligned_cols=143  Identities=24%  Similarity=0.235  Sum_probs=111.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++..++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        81 ~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~  156 (318)
T 1fot_A           81 IFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYV  156 (318)
T ss_dssp             EEEEECCCCSCBHHHHHH-HTSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred             EEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceec
Confidence            5899999    5655533 3456899999999999999999999998   999999999999975               


Q ss_pred             -----------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccccc
Q 040682           64 -----------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQ  132 (216)
Q Consensus        64 -----------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (216)
                                 .|+|||++.+..++.++|||||||++|||++|..||.......     ....... ..      ...+ 
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~i~~-~~------~~~p-  223 (318)
T 1fot_A          157 PDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK-----TYEKILN-AE------LRFP-  223 (318)
T ss_dssp             SSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-----HHHHHHH-CC------CCCC-
T ss_pred             CCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-----HHHHHHh-CC------CCCC-
Confidence                       2999999999999999999999999999999999986432211     1111111 10      0011 


Q ss_pred             chhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 040682          133 DEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVS  166 (216)
Q Consensus       133 ~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~  166 (216)
                          ......+.+++.+||+.+|++||     ++.++++
T Consensus       224 ----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          224 ----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             ----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             ----CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence                11445789999999999999999     8888874

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=8.7e-27  Score=192.15  Aligned_cols=158  Identities=22%  Similarity=0.268  Sum_probs=114.0

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .|+||||   +|.++...  ..+++..+..++.|++.||+|||+++   |+||||||+||+++.+               
T Consensus       105 ~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  179 (367)
T 1cm8_A          105 FYLVMPFMGTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQAD  179 (367)
T ss_dssp             CEEEEECCSEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence            3899999   67666333  46899999999999999999999998   9999999999999752               


Q ss_pred             -----------CCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhh-----------hccCc
Q 040682           65 -----------YMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDL-----------WKDDR  121 (216)
Q Consensus        65 -----------y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~  121 (216)
                                 |+|||++.+ ..++.++||||+||+++||++|+.||.+......  ...+...           +....
T Consensus       180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~~~~~~~~~~~~~~  257 (367)
T 1cm8_A          180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ--LKEIMKVTGTPPAEFVQRLQSDE  257 (367)
T ss_dssp             SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHTCSCHH
T ss_pred             cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCHHHHHHhhhHH
Confidence                       999999987 6899999999999999999999999975442211  1110000           00000


Q ss_pred             cccccc--ccccc---chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          122 VHELID--PVITQ---DEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       122 ~~~~~~--~~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ....+.  +....   ..........+.+++.+||+.||++|||+.|++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence            000000  00000   00111145678999999999999999999999874

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.93  E-value=7.4e-27  Score=192.62  Aligned_cols=158  Identities=23%  Similarity=0.246  Sum_probs=111.3

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+|+||   +|.++..  .+.+++..+..++.|++.||+|||+++   |+||||||+||+++.                
T Consensus       109 ~~lv~e~~~~~L~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~  183 (367)
T 2fst_X          109 VYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTA  183 (367)
T ss_dssp             CEEEEECCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC--------
T ss_pred             EEEEecccCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence            4889999   6666633  256999999999999999999999998   999999999999975                


Q ss_pred             ----------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc-----------cCc
Q 040682           64 ----------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK-----------DDR  121 (216)
Q Consensus        64 ----------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~  121 (216)
                                .|+|||++.+ ..++.++||||+||++|||++|+.||.+......  ...+.....           ...
T Consensus       184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~p~~~~~~~~~~~~  261 (367)
T 2fst_X          184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ--LKLILRLVGTPGAELLKKISSES  261 (367)
T ss_dssp             -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCHHHHTTCCCHH
T ss_pred             ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHHhhhHH
Confidence                      2999999987 5789999999999999999999999975443211  111111000           000


Q ss_pred             cccccc--cccccchhh---HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          122 VHELID--PVITQDEIS---LSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       122 ~~~~~~--~~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ....+.  +..+.....   ......+.+|+.+||+.||++|||+.|++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence            000000  000000000   1134678999999999999999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.93  E-value=7.6e-27  Score=185.09  Aligned_cols=144  Identities=25%  Similarity=0.307  Sum_probs=111.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.. ....+++..+..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        84 ~~lv~e~~~~~~l~~~l~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A           84 VYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA  159 (279)
T ss_dssp             EEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred             EEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccC
Confidence            5899999    4554432 2346899999999999999999999998   999999999999965               


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccc
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVIT  131 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (216)
                                  .|+|||.+.+..++.++||||||+++|++++|..||.......  .    .......      ....+
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~----~~~~~~~------~~~~~  227 (279)
T 3fdn_A          160 PSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE--T----YKRISRV------EFTFP  227 (279)
T ss_dssp             --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--H----HHHHHHT------CCCCC
T ss_pred             CcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH--H----HHHHHhC------CCCCC
Confidence                        2999999999999999999999999999999999986332111  0    1101000      01111


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                           ......+.+++.+||+.+|++||++.|++++
T Consensus       228 -----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          228 -----DFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             -----TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             -----CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                 1134568899999999999999999999864

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.93  E-value=5.5e-27  Score=188.78  Aligned_cols=147  Identities=22%  Similarity=0.303  Sum_probs=114.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.++..++.|++.||+|||+.+   ++|+||||+||+++.               
T Consensus        99 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  175 (314)
T 3com_A           99 LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQL  175 (314)
T ss_dssp             EEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence            5899999    677765445567999999999999999999999998   999999999999965               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++||||||+++|+|++|..||.......     .........      .+.
T Consensus       176 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~------~~~  244 (314)
T 3com_A          176 TDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-----AIFMIPTNP------PPT  244 (314)
T ss_dssp             BTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSC------CCC
T ss_pred             hhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHhcCC------Ccc
Confidence                          1999999999899999999999999999999999986432211     000000000      000


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .   ..+...+..+.+++.+||+.+|.+||++.++++
T Consensus       245 ~---~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          245 F---RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             C---SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             c---CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            0   011113457899999999999999999999985

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.93  E-value=5.9e-27  Score=185.75  Aligned_cols=143  Identities=17%  Similarity=0.294  Sum_probs=109.2

Q ss_pred             eeeeecc----cccccccC---CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANID---KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++||||    +|.++...   ....+++.+++.++.|++.||+|||+++   |+||||||+||+++.            
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~  162 (289)
T 1x8b_A           86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGD  162 (289)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-------------
T ss_pred             EEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccc
Confidence            5899999    77776332   2256899999999999999999999998   999999999999961            


Q ss_pred             --------------------------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchh
Q 040682           64 --------------------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLL  110 (216)
Q Consensus        64 --------------------------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~  110 (216)
                                                      .|+|||.+.+. .++.++||||||+++|++++|.+++....     . 
T Consensus       163 ~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~-  236 (289)
T 1x8b_A          163 EDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-----Q-  236 (289)
T ss_dssp             -------CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----H-
T ss_pred             cccccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----H-
Confidence                                            29999999876 56689999999999999999987753211     0 


Q ss_pred             hhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          111 GHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                         +........     +..+.     ..+..+.+++.+||+.+|++||++.|++++
T Consensus       237 ---~~~~~~~~~-----~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          237 ---WHEIRQGRL-----PRIPQ-----VLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             ---HHHHHTTCC-----CCCSS-----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             ---HHHHHcCCC-----CCCCc-----ccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence               111111111     11111     144578999999999999999999998753

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.93  E-value=4.2e-27  Score=189.52  Aligned_cols=155  Identities=18%  Similarity=0.186  Sum_probs=114.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++.+++.++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus       109 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~  184 (309)
T 2h34_A          109 LYVDMRLINGVDLAAMLR-RQGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASAT  184 (309)
T ss_dssp             EEEEEECCCCEEHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred             EEEEEEecCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence            5899999    6666633 2356999999999999999999999998   999999999999975               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||.+.+..++.++||||||+++|++++|..||......      ......... ..   .+
T Consensus       185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~-~~---~~  254 (309)
T 2h34_A          185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS------VMGAHINQA-IP---RP  254 (309)
T ss_dssp             ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH------HHHHHHHSC-CC---CG
T ss_pred             cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH------HHHHHhccC-CC---Cc
Confidence                           199999999889999999999999999999999998643211      111111110 00   00


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCC-CHHHHHHHHccccccc
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRP-TMSDVVSMISNEHLNL  175 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~evl~~L~~~~~~~  175 (216)
                          .......+..+.+++.+||+.+|++|| ++.++++.|+......
T Consensus       255 ----~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~  298 (309)
T 2h34_A          255 ----STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA  298 (309)
T ss_dssp             ----GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred             ----cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence                011112445688999999999999999 9999999999764443

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.93  E-value=4e-27  Score=207.30  Aligned_cols=150  Identities=23%  Similarity=0.290  Sum_probs=118.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++..++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       465 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~  541 (656)
T 2j0j_A          465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM  541 (656)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred             eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeec
Confidence            4899999    677765555567999999999999999999999998   999999999999964               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|+|||.+.+..++.++||||||+++|||++ |..||.......  ....    .....     .
T Consensus       542 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~~~----i~~~~-----~  610 (656)
T 2j0j_A          542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGR----IENGE-----R  610 (656)
T ss_dssp             CC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHH----HHHTC-----C
T ss_pred             CCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHH----HHcCC-----C
Confidence                           2999999999999999999999999999997 888886432211  1111    11110     0


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ...     +..++..+.+++.+||+.+|++||++.++++.|+.+
T Consensus       611 ~~~-----~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          611 LPM-----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCC-----CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            111     111456789999999999999999999999999875

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=2.3e-26  Score=188.79  Aligned_cols=150  Identities=23%  Similarity=0.246  Sum_probs=112.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++... ...+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       134 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~  209 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQ-RERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEF  209 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             EEEEeecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence            5899999    66666332 346899999999999999999999998   999999999999965               


Q ss_pred             ---------------CCCChhhhhcC--CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ---------------GYMPPEYALRG--FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ---------------~y~aPE~~~~~--~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                     .|+|||++.+.  .++.++|||||||++|||++|..||........ ...........       
T Consensus       210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~-------  281 (355)
T 1vzo_A          210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRILKS-------  281 (355)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHHHC-------
T ss_pred             ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHHHHHhcc-------
Confidence                           29999999863  578999999999999999999999865433222 11111110000       


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHHHc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSMIS  169 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~L~  169 (216)
                      .+..     +...+..+.+++.+||+.||++||     ++.|++++.-
T Consensus       282 ~~~~-----~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~  324 (355)
T 1vzo_A          282 EPPY-----PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF  324 (355)
T ss_dssp             CCCC-----CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred             CCCC-----CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcc
Confidence            0111     111445688999999999999999     8898887653

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.93  E-value=1.6e-26  Score=191.60  Aligned_cols=146  Identities=24%  Similarity=0.279  Sum_probs=110.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|..+. .....+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        90 ~~lv~e~~~gg~L~~~l-~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  165 (384)
T 4fr4_A           90 MFMVVDLLLGGDLRYHL-QQNVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAML  165 (384)
T ss_dssp             EEEEECCCTTEEHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeec
Confidence            5899999    555553 33456999999999999999999999999   999999999999975               


Q ss_pred             -------------CCCChhhhhc---CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 -------------GYMPPEYALR---GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 -------------~y~aPE~~~~---~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                   .|+|||++.+   ..++.++|||||||++|+|++|..||...........   ........      
T Consensus       166 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~---~~~~~~~~------  236 (384)
T 4fr4_A          166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI---VHTFETTV------  236 (384)
T ss_dssp             CTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHH---HHHHHHCC------
T ss_pred             cCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHH---HHHHhhcc------
Confidence                         2999999874   3589999999999999999999999965443322111   11010000      


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCC-HHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPT-MSDVVS  166 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~evl~  166 (216)
                      ..     .+...+..+.+++.+||+.+|++||+ +.++++
T Consensus       237 ~~-----~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          237 VT-----YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             CC-----CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             cC-----CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            00     11114567899999999999999998 666654

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.93  E-value=3.1e-26  Score=183.58  Aligned_cols=145  Identities=19%  Similarity=0.194  Sum_probs=110.6

Q ss_pred             eeeeecc---ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK---LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||   .+.++ .......+++.++..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        83 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~  159 (305)
T 2wtk_C           83 MYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL  159 (305)
T ss_dssp             EEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeecccccccc
Confidence            5899999   44344 3344567999999999999999999999998   999999999999964               


Q ss_pred             ----------------CCCChhhhhcCC--CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 ----------------GYMPPEYALRGF--FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~--~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                      .|+|||++.+..  ++.++||||||+++|+|++|..||.......      .........    
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~i~~~~----  229 (305)
T 2wtk_C          160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK------LFENIGKGS----  229 (305)
T ss_dssp             CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCC----
T ss_pred             CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH------HHHHHhcCC----
Confidence                            289999998654  3779999999999999999999986432111      111111110    


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        ...+.     .+...+.+++.+||+.||++||++.|++++
T Consensus       230 --~~~~~-----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          230 --YAIPG-----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             --CCCCS-----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             --CCCCC-----ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence              01111     144568899999999999999999999964

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.93  E-value=9.3e-27  Score=189.53  Aligned_cols=144  Identities=24%  Similarity=0.317  Sum_probs=112.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++.+++.++.|++.||+|||+++   |+|+||||+||+++.               
T Consensus       116 ~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  191 (335)
T 2owb_A          116 VFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV  191 (335)
T ss_dssp             EEEEECCCTTCBHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCCHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceec
Confidence            5899999    5555532 3356899999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++||||||+++|+|++|..||.......     . +.......      ..
T Consensus       192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~-~~~~~~~~------~~  259 (335)
T 2owb_A          192 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-----T-YLRIKKNE------YS  259 (335)
T ss_dssp             CSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----H-HHHHHHTC------CC
T ss_pred             ccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-----H-HHHHhcCC------CC
Confidence                          2999999999899999999999999999999999986432111     0 00010110      01


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .+.     .....+.+++.+||+.||++||++.|+++.
T Consensus       260 ~~~-----~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          260 IPK-----HINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             CCT-----TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CCc-----cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            111     134568899999999999999999999863

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.93  E-value=7.8e-27  Score=187.99  Aligned_cols=147  Identities=22%  Similarity=0.265  Sum_probs=110.5

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .|+|||+   +|.++... .+.+++.+++.++.|++.||+|||+++   ++|+||||+||+++.+               
T Consensus       103 ~~lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~~  178 (313)
T 3cek_A          103 IYMVMECGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLIDFGIANQMQP  178 (313)
T ss_dssp             EEEEECCCSEEHHHHHHH-CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTEEEECCCSSSCC---
T ss_pred             EEEEEecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEECCeEEEeeccccccccC
Confidence            5799999   67666333 357899999999999999999999998   9999999999998652               


Q ss_pred             ---------------CCChhhhhc-----------CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc
Q 040682           65 ---------------YMPPEYALR-----------GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK  118 (216)
Q Consensus        65 ---------------y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~  118 (216)
                                     |+|||.+.+           ..++.++||||||+++|+|++|..||........    .......
T Consensus       179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~----~~~~~~~  254 (313)
T 3cek_A          179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS----KLHAIID  254 (313)
T ss_dssp             -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH----HHHHHHC
T ss_pred             ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH----HHHHHHh
Confidence                           999999875           4688899999999999999999999854322111    1111111


Q ss_pred             cCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          119 DDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..     .....+..     ....+.+++.+||+.+|++||++.|+++.
T Consensus       255 ~~-----~~~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          255 PN-----HEIEFPDI-----PEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             TT-----SCCCCCCC-----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cc-----cccCCccc-----chHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            00     00001111     23568899999999999999999999853

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.93  E-value=5.3e-27  Score=185.78  Aligned_cols=153  Identities=21%  Similarity=0.282  Sum_probs=114.5

Q ss_pred             eeeeecc----ccccccc---CCCCCCChHHHHHHHHHHHHHHHhhhcCC--CCCeecCCCCCCceeecC----------
Q 040682            3 KKLVYSK----LLDAANI---DKKRLLDWQVRARIIEGIAQGLLYLHQYS--RLRIIHRDLKASNILLDS----------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~iiH~dik~~nil~~~----------   63 (216)
                      .|+||||    +|.++..   .....+++.+++.++.|++.||+|||+++  ..+++|+||||+||+++.          
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A           82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence            5899999    6666632   23345999999999999999999999875  234999999999999975          


Q ss_pred             -------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 -------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                         .|+|||.+.+..++.++||||||+++|+|++|..||.......  ..    ........  
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~----~~i~~~~~--  233 (279)
T 2w5a_A          162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--LA----GKIREGKF--  233 (279)
T ss_dssp             HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH----HHHHHTCC--
T ss_pred             hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH--HH----HHHhhccc--
Confidence                               2999999999899999999999999999999999986443211  11    11111111  


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                         +..+     ...+..+.+++.+||+.+|++||++.||++.+...
T Consensus       234 ---~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~  272 (279)
T 2w5a_A          234 ---RRIP-----YRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL  272 (279)
T ss_dssp             ---CCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred             ---ccCC-----cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence               1111     11456789999999999999999999999877653

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.93  E-value=1.5e-26  Score=193.51  Aligned_cols=140  Identities=16%  Similarity=0.224  Sum_probs=106.8

Q ss_pred             eeeeecc---cccccc------cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------
Q 040682            3 KKLVYSK---LLDAAN------IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------   63 (216)
                      .+++|++   +|.++.      ....+.+++..++.++.|++.||+|||+++   |+||||||+|||++.          
T Consensus       180 ~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiHrDiKp~NILl~~~~~~kL~DFG  256 (413)
T 3dzo_A          180 RFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFE  256 (413)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCGG
T ss_pred             eEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcccceEEEecCCeEEEEecc
Confidence            3556666   565553      333556889999999999999999999998   999999999999975          


Q ss_pred             ---------------CCCChhhh----------hcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc
Q 040682           64 ---------------GYMPPEYA----------LRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK  118 (216)
Q Consensus        64 ---------------~y~aPE~~----------~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~  118 (216)
                                     .|+|||++          .+..++.++|||||||++|||++|+.||........           
T Consensus       257 ~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~-----------  325 (413)
T 3dzo_A          257 HLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG-----------  325 (413)
T ss_dssp             GCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSC-----------
T ss_pred             ceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhh-----------
Confidence                           39999999          444688899999999999999999999864332111           


Q ss_pred             cCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          119 DDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                         ....+....   .    .+..+.+++.+||+.+|++||++.++++
T Consensus       326 ---~~~~~~~~~---~----~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          326 ---SEWIFRSCK---N----IPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             ---SGGGGSSCC---C----CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ---HHHHHhhcc---c----CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence               001111000   1    3356899999999999999999777653

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.93  E-value=1.4e-26  Score=187.30  Aligned_cols=148  Identities=21%  Similarity=0.194  Sum_probs=113.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.. ....+++.++..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        90 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~  165 (321)
T 2a2a_A           90 VVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (321)
T ss_dssp             EEEEECCCCSCBHHHHHH-TCSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred             EEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence            5899999    6666633 3456899999999999999999999998   999999999999853               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||.+.+..++.++||||||+++|+|++|..||.......  ..    .......     
T Consensus       166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~----~~i~~~~-----  234 (321)
T 2a2a_A          166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TL----ANITSVS-----  234 (321)
T ss_dssp             CEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HH----HHHHTTC-----
T ss_pred             ceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH--HH----HHHHhcc-----
Confidence                             1999999999999999999999999999999999986432211  00    0010000     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       .... .......+..+.+++.+||+.+|++||++.|++++
T Consensus       235 -~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          235 -YDFD-EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             -CCCC-HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             -cccC-hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence             0000 01111145678999999999999999999999863

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.93  E-value=5e-27  Score=192.47  Aligned_cols=143  Identities=17%  Similarity=0.177  Sum_probs=111.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++... .+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       116 ~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~  191 (350)
T 1rdq_E          116 LYMVMEYVAGGEMFSHLRR-IGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV  191 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceec
Confidence            5899999    55555332 346999999999999999999999999   999999999999975               


Q ss_pred             -----------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccccc
Q 040682           64 -----------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQ  132 (216)
Q Consensus        64 -----------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (216)
                                 .|+|||++.+..++.++|||||||++|||++|..||.......  .    ........      ...+ 
T Consensus       192 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~----~~~i~~~~------~~~p-  258 (350)
T 1rdq_E          192 KGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--I----YEKIVSGK------VRFP-  258 (350)
T ss_dssp             SSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H----HHHHHHCC------CCCC-
T ss_pred             cCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH--H----HHHHHcCC------CCCC-
Confidence                       2999999999999999999999999999999999986432211  1    11111110      0111 


Q ss_pred             chhhHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 040682          133 DEISLSMLMRYVKVALLCVQETVADRPT-----MSDVVS  166 (216)
Q Consensus       133 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~  166 (216)
                          ...+..+.+++.+||+.||.+||+     +.+|++
T Consensus       259 ----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          259 ----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             ----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             ----CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence                114557899999999999999998     777765

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.93  E-value=2e-26  Score=182.92  Aligned_cols=147  Identities=22%  Similarity=0.281  Sum_probs=111.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.+.. .....+++.++..++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        80 ~~~v~e~~~~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~  155 (284)
T 3kk8_A           80 HYLVFDLVTGGELFEDI-VAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA  155 (284)
T ss_dssp             EEEEECCCCSCBHHHHH-HHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEEEecCCCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence            5899999    444442 22356899999999999999999999998   999999999999953               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||.+.+..++.++||||||+++|++++|..||.......  ..    ......... .  
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~----~~~~~~~~~-~--  226 (284)
T 3kk8_A          156 IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LY----AQIKAGAYD-Y--  226 (284)
T ss_dssp             EECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH----HHHHHTCCC-C--
T ss_pred             EEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH--HH----HHHHhcccc-C--
Confidence                            1999999999999999999999999999999999985432211  11    111111000 0  


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      +   ..... ..+..+.+++.+||+.+|++||++.|+++
T Consensus       227 ~---~~~~~-~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          227 P---SPEWD-TVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             C---TTTTT-TSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             C---chhhc-ccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            0   00011 14457889999999999999999999986

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.93  E-value=7.5e-26  Score=183.02  Aligned_cols=148  Identities=22%  Similarity=0.232  Sum_probs=111.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. .....+++.+++.++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        89 ~~lv~e~~~~~~L~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~  164 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKV-VGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS  164 (322)
T ss_dssp             EEEEEECCTTEETHHHH-STTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred             eEEEEecCCCCcHHHHH-hccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence            4899999    555553 33457999999999999999999999998   999999999999963               


Q ss_pred             ----------------CCCChhhhh---cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 ----------------GYMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 ----------------~y~aPE~~~---~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                      .|+|||++.   +..++.++|||||||++|++++|..||........ ......    ..... 
T Consensus       165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~----~~~~~-  238 (322)
T 2ycf_A          165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQIT----SGKYN-  238 (322)
T ss_dssp             EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHHH----HTCCC-
T ss_pred             eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHHH----hCccc-
Confidence                            299999975   45788999999999999999999999865433221 111110    11000 


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                           .. .......+..+.+++.+||+.||++||++.++++
T Consensus       239 -----~~-~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          239 -----FI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             -----CC-HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             -----cC-chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence                 00 0111114567899999999999999999999885

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.93  E-value=2.5e-26  Score=193.17  Aligned_cols=94  Identities=28%  Similarity=0.381  Sum_probs=80.3

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .|+||||   +|.++. .....+++..++.++.|++.||+|||+++   |+||||||+|||++.+               
T Consensus       105 ~~lv~e~~~~~L~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~~  180 (432)
T 3n9x_A          105 LYIVLEIADSDLKKLF-KTPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTIN  180 (432)
T ss_dssp             EEEEEECCSEEHHHHH-HSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred             EEEEEecCCcCHHHHH-hccCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence            5899999   666653 33456999999999999999999999999   9999999999999641               


Q ss_pred             ------------------------------------CCChhhhh-cCCCCcchhhhhHHHHHHHHHhCCCCCC
Q 040682           65 ------------------------------------YMPPEYAL-RGFFSIKSDVFSFGVLMLEILSGKKSTA  100 (216)
Q Consensus        65 ------------------------------------y~aPE~~~-~~~~~~~~Dv~s~G~~l~ell~g~~~~~  100 (216)
                                                          |+|||++. +..++.++||||+||++|||++|..|+.
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence                                                89999864 5579999999999999999998655543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.93  E-value=2e-26  Score=193.81  Aligned_cols=147  Identities=20%  Similarity=0.177  Sum_probs=108.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   +|.++.......+...++..++.|++.||+|||+++   |+||||||+|||++.                
T Consensus        93 ~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~  169 (432)
T 3p23_A           93 QYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGL  169 (432)
T ss_dssp             EEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred             EEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence            5899999   777775555556677778899999999999999998   999999999999931                


Q ss_pred             ---------------------CCCChhhhh---cCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhc
Q 040682           64 ---------------------GYMPPEYAL---RGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWK  118 (216)
Q Consensus        64 ---------------------~y~aPE~~~---~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~  118 (216)
                                           .|+|||++.   +..++.++|||||||++|||++ |..||........      .....
T Consensus       170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~------~~~~~  243 (432)
T 3p23_A          170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA------NILLG  243 (432)
T ss_dssp             EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH------HHHTT
T ss_pred             eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH------HHHhc
Confidence                                 289999997   4567889999999999999999 8888743221110      00000


Q ss_pred             cCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          119 DDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .. ..   ..    ..........+.+++.+||+.||++||++.||++
T Consensus       244 ~~-~~---~~----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          244 AC-SL---DC----LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             CC-CC---TT----SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cC-Cc---cc----cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            00 00   00    0111124556889999999999999999999984

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.93  E-value=2.4e-27  Score=194.07  Aligned_cols=142  Identities=25%  Similarity=0.288  Sum_probs=110.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        93 ~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  168 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQ-SCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKEN  168 (345)
T ss_dssp             EEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence            5899999    5555532 2356899999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|||++|..||.......  ..    ......      .+.
T Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~----~~i~~~------~~~  236 (345)
T 1xjd_A          169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--LF----HSIRMD------NPF  236 (345)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH----HHHHHC------CCC
T ss_pred             ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH--HH----HHHHhC------CCC
Confidence                          2999999999999999999999999999999999986433211  11    111111      011


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHH-HHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMS-DVV  165 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-evl  165 (216)
                      .+     ...+..+.+++.+||+.+|++||++. +++
T Consensus       237 ~p-----~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          237 YP-----RWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             CC-----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             CC-----cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            11     11445788999999999999999997 665

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.93  E-value=1.3e-26  Score=188.28  Aligned_cols=144  Identities=23%  Similarity=0.241  Sum_probs=110.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        96 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~  171 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLE-REGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKES  171 (327)
T ss_dssp             EEEEEECCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred             EEEEEeCCCCCcHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence            5899999    5555532 3356899999999999999999999998   999999999999965               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++||||||+++|+|++|..||.......  .....   .. ..      ..
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i---~~-~~------~~  239 (327)
T 3a62_A          172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK--TIDKI---LK-CK------LN  239 (327)
T ss_dssp             -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHH---HH-TC------CC
T ss_pred             ccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH--HHHHH---Hh-CC------CC
Confidence                          2999999999899999999999999999999999986433211  11111   10 00      00


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                      .+     ......+.+++.+||+.+|++||     ++.|++++
T Consensus       240 ~p-----~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          240 LP-----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             CC-----TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             CC-----CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence            11     11445789999999999999999     67777653

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.93  E-value=2.5e-26  Score=191.58  Aligned_cols=162  Identities=19%  Similarity=0.228  Sum_probs=108.4

Q ss_pred             eeeeecc---ccccccc--------CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceee----cC----
Q 040682            3 KKLVYSK---LLDAANI--------DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL----DS----   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~----~~----   63 (216)
                      .|+||||   +|.++..        .....+++.+++.++.|++.||+|||+++   |+||||||+|||+    +.    
T Consensus        95 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~  171 (405)
T 3rgf_A           95 VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRV  171 (405)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCE
T ss_pred             EEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcE
Confidence            5899999   4444311        12235999999999999999999999999   9999999999999    22    


Q ss_pred             ----------------------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-------
Q 040682           64 ----------------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-------  107 (216)
Q Consensus        64 ----------------------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-------  107 (216)
                                                  .|+|||++.+. .++.++|||||||++|+|++|..||........       
T Consensus       172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~  251 (405)
T 3rgf_A          172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH  251 (405)
T ss_dssp             EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred             EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence                                        29999999875 589999999999999999999999976543211       


Q ss_pred             chhhhhhhhhc---cCccccc------------c-ccccccchhhH-------HHHHHHHHHHHhccccCCCCCCCHHHH
Q 040682          108 NLLGHAWDLWK---DDRVHEL------------I-DPVITQDEISL-------SMLMRYVKVALLCVQETVADRPTMSDV  164 (216)
Q Consensus       108 ~~~~~~~~~~~---~~~~~~~------------~-~~~~~~~~~~~-------~~~~~~~~l~~~cl~~~p~~Rps~~ev  164 (216)
                      ...........   ...+...            + ...........       .....+.+|+.+||+.||.+|||+.|+
T Consensus       252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~  331 (405)
T 3rgf_A          252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA  331 (405)
T ss_dssp             HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence            01111111000   0000000            0 00000000000       014568899999999999999999999


Q ss_pred             HHH
Q 040682          165 VSM  167 (216)
Q Consensus       165 l~~  167 (216)
                      +++
T Consensus       332 L~h  334 (405)
T 3rgf_A          332 MQD  334 (405)
T ss_dssp             HTS
T ss_pred             hcC
Confidence            864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.93  E-value=6.7e-27  Score=191.92  Aligned_cols=143  Identities=24%  Similarity=0.259  Sum_probs=110.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        96 ~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  171 (353)
T 2i0e_A           96 LYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  171 (353)
T ss_dssp             EEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence            5899999    5555532 2346999999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|||++|..||.......  ....    .....      ..
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--~~~~----i~~~~------~~  239 (353)
T 2i0e_A          172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--LFQS----IMEHN------VA  239 (353)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH----HHHCC------CC
T ss_pred             ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH--HHHH----HHhCC------CC
Confidence                          2999999999999999999999999999999999986432211  1111    11110      01


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPT-----MSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~  166 (216)
                      .     +...+..+.+++.+||+.+|.+||+     +.++++
T Consensus       240 ~-----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          240 Y-----PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             C-----CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             C-----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            1     1114567899999999999999996     466654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.93  E-value=1.4e-26  Score=187.35  Aligned_cols=146  Identities=23%  Similarity=0.343  Sum_probs=110.1

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      .|+||||    +|.++.. .....+++..++.++.|++.||+|||+++   ++|+||||+||+++.+             
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~  178 (326)
T 2x7f_A          102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQ  178 (326)
T ss_dssp             EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence            5899999    6666633 23457999999999999999999999998   9999999999999751             


Q ss_pred             ----------------CCChhhhh-----cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           65 ----------------YMPPEYAL-----RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        65 ----------------y~aPE~~~-----~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                      |+|||.+.     +..++.++|||||||++|+|++|..||.......     ....... .   
T Consensus       179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~-~---  249 (326)
T 2x7f_A          179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-----ALFLIPR-N---  249 (326)
T ss_dssp             ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHH-S---
T ss_pred             cCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-----HHHHhhc-C---
Confidence                            99999987     4578899999999999999999999985432211     0000000 0   


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                        ..+......    .+..+.+++.+||+.+|++||++.++++
T Consensus       250 --~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          250 --PAPRLKSKK----WSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             --CCCCCSCSC----SCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             --ccccCCccc----cCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence              011111111    3457899999999999999999999986

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.93  E-value=3.3e-26  Score=182.61  Aligned_cols=147  Identities=14%  Similarity=0.041  Sum_probs=108.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------CCChh
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------YMPPE   69 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------y~aPE   69 (216)
                      .|+||||    +|.++...  + ....++..++.|++.||+|||+++   |+||||||+|||++.+         |++  
T Consensus       106 ~~lv~e~~~g~~L~~~l~~--~-~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~~~~--  177 (286)
T 3uqc_A          106 GLVVAEWIRGGSLQEVADT--S-PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPATMP--  177 (286)
T ss_dssp             EEEEEECCCEEEHHHHHTT--C-CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCCCCT--
T ss_pred             EEEEEEecCCCCHHHHHhc--C-CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEeccccC--
Confidence            5899999    67766422  2 466678899999999999999999   9999999999999764         443  


Q ss_pred             hhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc-ccccchhhHHHHHHHHHHHH
Q 040682           70 YALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP-VITQDEISLSMLMRYVKVAL  148 (216)
Q Consensus        70 ~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~  148 (216)
                           .++.++|||||||++|||++|+.||............           ...... ...........+..+.+++.
T Consensus       178 -----~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~li~  241 (286)
T 3uqc_A          178 -----DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-----------ERDTAGQPIEPADIDRDIPFQISAVAA  241 (286)
T ss_dssp             -----TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-----------CBCTTSCBCCHHHHCTTSCHHHHHHHH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-----------HHHhccCCCChhhcccCCCHHHHHHHH
Confidence                 4789999999999999999999998765432210000           000000 00001111124567899999


Q ss_pred             hccccCCCCCCCHHHHHHHHcccccc
Q 040682          149 LCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       149 ~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                      +||+.||++| |+.|+++.|+.....
T Consensus       242 ~~l~~dP~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          242 RSVQGDGGIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             HHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred             HHcccCCccC-CHHHHHHHHHHHhcc
Confidence            9999999999 999999999986443

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.93  E-value=2e-26  Score=182.86  Aligned_cols=147  Identities=20%  Similarity=0.175  Sum_probs=112.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++.. ....+++.++..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        83 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~  158 (283)
T 3bhy_A           83 VVLILELVSGGELFDFLA-EKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI  158 (283)
T ss_dssp             EEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEEEeecCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence            5899999    6666633 2356899999999999999999999998   999999999999953               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||.+.+..++.++||||||+++|++++|..||.......  .    ........     
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~----~~~~~~~~-----  227 (283)
T 3bhy_A          159 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE--T----LTNISAVN-----  227 (283)
T ss_dssp             CEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--H----HHHHHTTC-----
T ss_pred             ceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH--H----HHHhHhcc-----
Confidence                             1999999998899999999999999999999999986432211  0    11010100     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       ..... ......+..+.+++.+||+.+|++||++.|+++
T Consensus       228 -~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          228 -YDFDE-EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             -CCCCH-HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -cCCcc-hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence             00000 111114567899999999999999999999986

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.93  E-value=9e-27  Score=191.17  Aligned_cols=159  Identities=23%  Similarity=0.349  Sum_probs=112.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcC-CCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQY-SRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .++||||    +|.++.. ..+.+++..+..++.|++.||+|||++ +   |+|+||||+||+++.              
T Consensus       106 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  181 (360)
T 3eqc_A          106 ISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQ  181 (360)
T ss_dssp             EEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHH
T ss_pred             EEEEEECCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcc
Confidence            5899999    6666633 234689999999999999999999995 7   999999999999975              


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhh----------hhhhh---
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGH----------AWDLW---  117 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~----------~~~~~---  117 (216)
                                   .|+|||++.+..++.++|||||||++|+|++|..||.............          .....   
T Consensus       182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (360)
T 3eqc_A          182 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG  261 (360)
T ss_dssp             HHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred             cccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence                         2999999999999999999999999999999999986543211100000          00000   


Q ss_pred             -----------ccCcccccc----ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          118 -----------KDDRVHELI----DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       118 -----------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                                 ......+.+    ..... .......+..+.+++.+||+.+|++|||+.|+++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          262 RPLNKFGMDSRPPMAIFELLDYIVNEPPP-KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             ------------CCCHHHHHHHHHHSCCC-CCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CcccccccCCCCcccchhhhhHHhccCCC-CCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                       000000000    00000 0011113557899999999999999999999985

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.93  E-value=2.3e-26  Score=188.48  Aligned_cols=160  Identities=16%  Similarity=0.188  Sum_probs=112.3

Q ss_pred             eeeeecc---ccccc---ccCCCCCCChHHHHHHHHHHHHHHHhhh--cCCCCCeecCCCCCCceeecC-----------
Q 040682            3 KKLVYSK---LLDAA---NIDKKRLLDWQVRARIIEGIAQGLLYLH--QYSRLRIIHRDLKASNILLDS-----------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~iiH~dik~~nil~~~-----------   63 (216)
                      .++||||   .+...   .......+++..+..++.|++.||+|||  +++   |+||||||+|||++.           
T Consensus       101 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl~Dfg  177 (360)
T 3e3p_A          101 LNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKLCDFG  177 (360)
T ss_dssp             EEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred             EEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEEeeCC
Confidence            5789999   33332   2345667899999999999999999999  887   999999999999974           


Q ss_pred             ------------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhh---------
Q 040682           64 ------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWD---------  115 (216)
Q Consensus        64 ------------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~---------  115 (216)
                                        .|+|||++.+. .++.++|||||||++|+|++|..||........  ......         
T Consensus       178 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~  255 (360)
T 3e3p_A          178 SAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ--LHEIVRVLGCPSREV  255 (360)
T ss_dssp             TCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHH
T ss_pred             CceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH--HHHHHHHcCCCCHHH
Confidence                              19999998765 489999999999999999999999875432211  111100         


Q ss_pred             --hhccCcc-cccccc-cccc----chhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          116 --LWKDDRV-HELIDP-VITQ----DEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       116 --~~~~~~~-~~~~~~-~~~~----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        ....... ....+. ....    .......+..+.+++.+||+.||.+|||+.|++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          256 LRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence              0000000 000000 0000    00001145679999999999999999999999853

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.93  E-value=9.3e-27  Score=187.52  Aligned_cols=148  Identities=22%  Similarity=0.403  Sum_probs=109.1

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcC-CCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQY-SRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||   ++..+.......+++..+..++.|++.||+|||++ +   ++|+||||+||+++.               
T Consensus        99 ~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~  175 (318)
T 2dyl_A           99 VFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRL  175 (318)
T ss_dssp             EEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred             EEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence            5899999   45555444456799999999999999999999995 8   999999999999975               


Q ss_pred             -------------CCCChhhhh-----cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -------------GYMPPEYAL-----RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -------------~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                   .|+|||.+.     +..++.++||||||+++|+|++|..||....... ...   .......     
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~---~~~~~~~-----  246 (318)
T 2dyl_A          176 VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF-EVL---TKVLQEE-----  246 (318)
T ss_dssp             -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HHH---HHHHHSC-----
T ss_pred             cCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH-HHH---HHHhccC-----
Confidence                         299999985     4568899999999999999999999986432211 111   1111110     


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       .+..+.   ....+..+.+++.+||+.+|.+||++.++++
T Consensus       247 -~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          247 -PPLLPG---HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             -CCCCCS---SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -CCCCCc---cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence             011110   0013456889999999999999999999985

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.93  E-value=1.8e-26  Score=184.28  Aligned_cols=144  Identities=24%  Similarity=0.310  Sum_probs=112.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    +|.++. ...+.+++.+++.++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        90 ~~lv~e~~~~~~L~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  165 (294)
T 2rku_A           90 VFVVLELCRRRSLLELH-KRRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV  165 (294)
T ss_dssp             EEEEEECCTTCBHHHHH-HHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceec
Confidence            5899999    555552 23356899999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||.+.+..++.++||||||+++|+|++|..||........      ........      ..
T Consensus       166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~~~~------~~  233 (294)
T 2rku_A          166 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------YLRIKKNE------YS  233 (294)
T ss_dssp             CSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHTTC------CC
T ss_pred             ccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHhhcc------CC
Confidence                          29999999988899999999999999999999999864322110      11111110      00


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .+     ......+.+++.+||+.+|++||++.|+++.
T Consensus       234 ~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          234 IP-----KHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             CC-----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             Cc-----cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            11     1134568899999999999999999999864

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.93  E-value=3.1e-26  Score=182.31  Aligned_cols=146  Identities=21%  Similarity=0.288  Sum_probs=108.5

Q ss_pred             eeeeecc----ccccccc---CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANI---DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .++||||    +|.+...   .....+++..++.++.|++.||+|||+++   |+||||||+||+++.            
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Df  171 (285)
T 3is5_A           95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDF  171 (285)
T ss_dssp             EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred             EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEee
Confidence            5899999    5555422   23467999999999999999999999998   999999999999942            


Q ss_pred             -------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 -------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                         .|+|||.+. ..++.++||||||+++|+|++|..||........  ...    ....    
T Consensus       172 g~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~--~~~----~~~~----  240 (285)
T 3is5_A          172 GLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV--QQK----ATYK----  240 (285)
T ss_dssp             CCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHH----HHHC----
T ss_pred             ecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH--Hhh----hccC----
Confidence                               199999875 5689999999999999999999999864332111  000    0000    


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                        .+.......+  ....+.+++.+||+.||++||++.|+++
T Consensus       241 --~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          241 --EPNYAVECRP--LTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             --CCCCCC--CC--CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             --CcccccccCc--CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence              0000000000  3456889999999999999999999975

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.93  E-value=1.3e-26  Score=186.58  Aligned_cols=157  Identities=18%  Similarity=0.216  Sum_probs=112.4

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   +|.++..  ++.+++..++.++.|++.||+|||+++   ++|+||||+||+++.                
T Consensus        97 ~~lv~e~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~  171 (320)
T 2i6l_A           97 VYIVQEYMETDLANVLE--QGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIM  171 (320)
T ss_dssp             EEEEEECCSEEHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEECCCTTCBCC
T ss_pred             eeEEeeccCCCHHHHhh--cCCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEccCcccccc
Confidence            4799999   6666532  356899999999999999999999998   999999999999962                


Q ss_pred             -----------------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc------
Q 040682           64 -----------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD------  119 (216)
Q Consensus        64 -----------------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~------  119 (216)
                                       .|+|||.+.+ ..++.++||||||+++|+|++|+.||........  ..........      
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~  249 (320)
T 2i6l_A          172 DPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ--MQLILESIPVVHEEDR  249 (320)
T ss_dssp             --------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHSCCCCHHHH
T ss_pred             CCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCchhhh
Confidence                             1999998876 5789999999999999999999999875442111  0000000000      


Q ss_pred             ----Ccccc-----ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          120 ----DRVHE-----LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       120 ----~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                          ..+..     ...+...........+..+.+++.+||+.||++||++.|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          250 QELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence                00000     000000000111124567999999999999999999999985

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.93  E-value=5.5e-26  Score=196.46  Aligned_cols=149  Identities=23%  Similarity=0.212  Sum_probs=113.8

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++.. .....+++.+++.++.|++.||+|||+++   |+||||||+|||++.              
T Consensus       259 l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~  335 (576)
T 2acx_A          259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVH  335 (576)
T ss_dssp             EEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEeccccee
Confidence            5899999    6665533 33445999999999999999999999998   999999999999975              


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|||++|..||.........  ..........      ...
T Consensus       336 ~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~--~~i~~~i~~~------~~~  407 (576)
T 2acx_A          336 VPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR--EEVERLVKEV------PEE  407 (576)
T ss_dssp             CCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH--HHHHHHHHHC------CCC
T ss_pred             cccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH--HHHHHHhhcc------ccc
Confidence                          299999999989999999999999999999999999754432210  1111111000      000


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                           .+...+..+.+++.+||+.||.+||     ++.||+++
T Consensus       408 -----~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          408 -----YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             -----CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             -----CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence                 1111456789999999999999999     67777753

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.93  E-value=2e-26  Score=183.13  Aligned_cols=143  Identities=22%  Similarity=0.227  Sum_probs=111.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++... .+.+++.++..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        89 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  164 (284)
T 2vgo_A           89 IYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHA  164 (284)
T ss_dssp             EEEEECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccC
Confidence            5899999    55555332 346899999999999999999999998   999999999999975               


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccc
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVIT  131 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (216)
                                  .|+|||.+.+..++.++||||||+++|++++|..||........      .......      +...+
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~~------~~~~~  232 (284)
T 2vgo_A          165 PSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET------HRRIVNV------DLKFP  232 (284)
T ss_dssp             SSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHTT------CCCCC
T ss_pred             cccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH------HHHHhcc------ccCCC
Confidence                        29999999998999999999999999999999999864322110      0001000      01111


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                           ...+..+.+++.+||+.+|.+||++.++++
T Consensus       233 -----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          233 -----PFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             -----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -----CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence                 113456889999999999999999999985

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.93  E-value=9.8e-27  Score=192.27  Aligned_cols=140  Identities=24%  Similarity=0.251  Sum_probs=108.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.. ..+.+++..++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       114 ~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~  189 (373)
T 2r5t_A          114 LYFVLDYINGGELFYHLQ-RERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN  189 (373)
T ss_dssp             EEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred             EEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence            5899999    5555432 3456899999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|+|||||++|||++|..||.......  .    +........      .
T Consensus       190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--~----~~~i~~~~~------~  257 (373)
T 2r5t_A          190 IEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE--M----YDNILNKPL------Q  257 (373)
T ss_dssp             BCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH--H----HHHHHHSCC------C
T ss_pred             ccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH--H----HHHHHhccc------C
Confidence                          2999999999999999999999999999999999986432211  1    111101100      0


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSD  163 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~e  163 (216)
                      .+     ......+.+++.+||+.||.+||++.+
T Consensus       258 ~~-----~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          258 LK-----PNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             CC-----SSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             CC-----CCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence            11     113456889999999999999999854

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.93  E-value=3.8e-26  Score=194.51  Aligned_cols=146  Identities=25%  Similarity=0.266  Sum_probs=110.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.+.. ...+.+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       101 ~~lv~e~~~~~~L~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  176 (484)
T 3nyv_A          101 FYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS  176 (484)
T ss_dssp             EEEEECCCCSCBHHHHH-HTCSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred             EEEEEecCCCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence            5899999    454442 23456999999999999999999999998   999999999999942               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||++.+ .++.++||||+||++|+|++|..||.......  ....    ......    .
T Consensus       177 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~----i~~~~~----~  245 (484)
T 3nyv_A          177 THFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD--ILKK----VEKGKY----T  245 (484)
T ss_dssp             HHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH----HHHCCC----C
T ss_pred             EEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH--HHHH----HHcCCC----C
Confidence                            2999999876 68999999999999999999999986533211  1111    111100    0


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .  ....+. ..+..+.+++.+||+.+|.+|||+.|+++
T Consensus       246 ~--~~~~~~-~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          246 F--ELPQWK-KVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             C--CSGGGG-GSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             C--CCcccc-cCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            0  001111 24567899999999999999999999985

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.93  E-value=2.4e-26  Score=189.14  Aligned_cols=158  Identities=20%  Similarity=0.235  Sum_probs=112.1

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .|+||||   +|.++..  .+.+++.++..++.|++.||+|||+++   |+||||||+||+++.+               
T Consensus       105 ~~iv~e~~~~~L~~~l~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  179 (364)
T 3qyz_A          105 VYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVAD  179 (364)
T ss_dssp             EEEEEECCSEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEcccCcCHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence            5899999   5555532  245999999999999999999999998   9999999999999752               


Q ss_pred             -----------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccC---ccc
Q 040682           65 -----------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDD---RVH  123 (216)
Q Consensus        65 -----------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  123 (216)
                                       |+|||++.+. .++.++|||||||++|+|++|..||........  ...........   ...
T Consensus       180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~  257 (364)
T 3qyz_A          180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ--LNHILGILGSPSQEDLN  257 (364)
T ss_dssp             GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH--HHHHHHHHCSCCHHHHH
T ss_pred             CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH--HHHHHHHhCCCCHHHHH
Confidence                             8999987654 589999999999999999999999865543321  11111000000   000


Q ss_pred             ------------ccccc-ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          124 ------------ELIDP-VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       124 ------------~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                                  ..... ..............+.+++.+||+.||++|||+.|++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                        00000 000000111135678999999999999999999999853

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.93  E-value=4.2e-26  Score=188.17  Aligned_cols=157  Identities=20%  Similarity=0.237  Sum_probs=111.8

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   +|..+.   ...+++.++..++.|++.||+|||+++   |+||||||+||+++.                
T Consensus       122 ~~lv~e~~~~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          122 FYLVMPFMQTDLQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             CEEEEECCCEEHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             EEEEEccccccHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence            3899999   444443   234999999999999999999999998   999999999999975                


Q ss_pred             ----------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhh-----------ccCc
Q 040682           64 ----------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW-----------KDDR  121 (216)
Q Consensus        64 ----------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~  121 (216)
                                .|+|||++.+ ..++.++|||||||++|+|++|..||........  ........           ....
T Consensus       196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~  273 (371)
T 4exu_A          196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ--LTQILKVTGVPGTEFVQKLNDKA  273 (371)
T ss_dssp             ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCHHHHTTCSCHH
T ss_pred             cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCcHHHHHHhhhhh
Confidence                      2999999987 6889999999999999999999999965432111  00000000           0000


Q ss_pred             cc----cccc-cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          122 VH----ELID-PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       122 ~~----~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..    .... +..............+.+++.+||+.||++||++.|++++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          274 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             hhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            00    0000 0000000111145678999999999999999999998854

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.93  E-value=3.9e-26  Score=184.94  Aligned_cols=150  Identities=25%  Similarity=0.365  Sum_probs=100.9

Q ss_pred             eeeeecc---cccccc----cCCCCCCChHHHHHHHHHHHHHHHhhhcC-CCCCeecCCCCCCceeecC-----------
Q 040682            3 KKLVYSK---LLDAAN----IDKKRLLDWQVRARIIEGIAQGLLYLHQY-SRLRIIHRDLKASNILLDS-----------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~~~iiH~dik~~nil~~~-----------   63 (216)
                      .|+||||   +|.++.    ......+++..+..++.|++.||.|||++ +   ++||||||+||+++.           
T Consensus        96 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~  172 (327)
T 3aln_A           96 CWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGI  172 (327)
T ss_dssp             EEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSS
T ss_pred             eEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCC
Confidence            5799999   554442    22356799999999999999999999998 8   999999999999965           


Q ss_pred             -----------------CCCChhhh----hcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcc
Q 040682           64 -----------------GYMPPEYA----LRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRV  122 (216)
Q Consensus        64 -----------------~y~aPE~~----~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (216)
                                       .|+|||.+    .+..++.++||||||+++|+|++|..||..........    ..      .
T Consensus       173 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~------~  242 (327)
T 3aln_A          173 SGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL----TQ------V  242 (327)
T ss_dssp             SCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CC------C
T ss_pred             ceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH----HH------H
Confidence                             29999998    45578999999999999999999999986432211100    00      0


Q ss_pred             ccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          123 HELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .....+.+..... ......+.+++.+||+.+|++||++.++++
T Consensus       243 ~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          243 VKGDPPQLSNSEE-REFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCSCCCCCCCCSS-CCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             hcCCCCCCCCccc-ccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            0000011111101 114567899999999999999999999975

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.93  E-value=4.2e-26  Score=193.85  Aligned_cols=143  Identities=24%  Similarity=0.298  Sum_probs=111.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++. ...+.+++.+++.++.|++.||+|||+++   |+||||||+||+++.               
T Consensus        91 ~~lv~E~~~gg~L~~~l-~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~  166 (476)
T 2y94_A           91 IFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM  166 (476)
T ss_dssp             EEEEEECCSSEEHHHHT-TSSSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             EEEEEeCCCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhc
Confidence            5899999    566653 33456999999999999999999999998   999999999999975               


Q ss_pred             -------------CCCChhhhhcCCC-CcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 -------------GYMPPEYALRGFF-SIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~-~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                   .|+|||++.+..+ +.++||||+||++|+|++|..||.......  ....    ......      .
T Consensus       167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~--~~~~----i~~~~~------~  234 (476)
T 2y94_A          167 SDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT--LFKK----ICDGIF------Y  234 (476)
T ss_dssp             CTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH--HHHH----HHTTCC------C
T ss_pred             cccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH--HHHH----HhcCCc------C
Confidence                         2999999988765 689999999999999999999986433211  1111    111100      0


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .     +......+.+++.+||+.||++|||+.|+++
T Consensus       235 ~-----p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          235 T-----PQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             C-----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             C-----CccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            0     0113456889999999999999999999986

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.93  E-value=8.3e-26  Score=184.32  Aligned_cols=156  Identities=21%  Similarity=0.316  Sum_probs=112.7

Q ss_pred             eeeeecc----ccccc------ccCC-CCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeecCC------
Q 040682            3 KKLVYSK----LLDAA------NIDK-KRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDSG------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~------~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~~~------   64 (216)
                      .|+||||    +|.++      .... ...+++..++.++.|++.||+|||+ ++   ++|+||||+||+++.+      
T Consensus       118 ~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~~~~~~~kl~  194 (348)
T 2pml_X          118 VYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILMDKNGRVKLS  194 (348)
T ss_dssp             EEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEECTTSCEEEC
T ss_pred             EEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEEcCCCcEEEe
Confidence            5899999    66665      2221 5679999999999999999999999 88   9999999999999652      


Q ss_pred             ---------------------CCChhhhhcC-CCCc-chhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           65 ---------------------YMPPEYALRG-FFSI-KSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        65 ---------------------y~aPE~~~~~-~~~~-~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                           |+|||.+.+. .++. ++||||||+++|+|++|..||........ ....    .....
T Consensus       195 dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~----i~~~~  269 (348)
T 2pml_X          195 DFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE-LFNN----IRTKN  269 (348)
T ss_dssp             CCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH-HHHH----HTSCC
T ss_pred             ccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHH----HhccC
Confidence                                 9999999887 6666 99999999999999999999875443211 1111    11110


Q ss_pred             cc------cccccccc--cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          122 VH------ELIDPVIT--QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       122 ~~------~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ..      ....+...  ........+..+.+++.+||+.+|.+||++.|+++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          270 IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             CCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            00      00000000  00001224567899999999999999999999986

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.93  E-value=3.3e-26  Score=192.66  Aligned_cols=150  Identities=19%  Similarity=0.212  Sum_probs=113.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++.....+.+++..++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       149 ~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~  225 (437)
T 4aw2_A          149 LYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKL  225 (437)
T ss_dssp             EEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhc
Confidence            5899999    677775555667999999999999999999999998   999999999999975               


Q ss_pred             ---------------CCCChhhhh-----cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           64 ---------------GYMPPEYAL-----RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        64 ---------------~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                     .|+|||++.     +..++.++|||||||++|||++|+.||........  ...+..   ...  
T Consensus       226 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~--~~~i~~---~~~--  298 (437)
T 4aw2_A          226 MEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET--YGKIMN---HKE--  298 (437)
T ss_dssp             CTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHHT---HHH--
T ss_pred             ccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH--HHhhhh---ccc--
Confidence                           299999987     45689999999999999999999999964332111  111100   000  


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVAD--RPTMSDVVSM  167 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~evl~~  167 (216)
                      ...-|...     ...+..+.+++.+||..+|++  |+++.|++++
T Consensus       299 ~~~~p~~~-----~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          299 RFQFPTQV-----TDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             HCCCCSSC-----CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             cccCCccc-----ccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence            00001000     014457889999999888887  9999999864

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.93  E-value=1.6e-26  Score=203.99  Aligned_cols=143  Identities=24%  Similarity=0.261  Sum_probs=111.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|..+.. ..+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       417 ~~lV~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~  492 (674)
T 3pfq_A          417 LYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  492 (674)
T ss_dssp             EEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred             EEEEEeCcCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecc
Confidence            4899999    5555533 3356999999999999999999999998   999999999999975               


Q ss_pred             --------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                    .|+|||++.+..++.++|||||||++|||++|..||.......  ....    .....      ..
T Consensus       493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~--~~~~----i~~~~------~~  560 (674)
T 3pfq_A          493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--LFQS----IMEHN------VA  560 (674)
T ss_dssp             CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH----HHSSC------CC
T ss_pred             ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH--HHHH----HHhCC------CC
Confidence                          2999999999999999999999999999999999996533211  1111    11110      01


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCH-----HHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTM-----SDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~evl~  166 (216)
                           .+...+.++.+++.+||+.+|++||++     .||++
T Consensus       561 -----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          561 -----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             -----CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             -----CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence                 111245678999999999999999997     66664

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.93  E-value=6.1e-26  Score=185.83  Aligned_cols=155  Identities=19%  Similarity=0.229  Sum_probs=112.0

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   +|.++.   ...+++.++..++.|++.||+|||+++   ++||||||+||+++.                
T Consensus       104 ~~lv~e~~~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          104 FYLVMPFMQTDLQKIM---GLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHAD  177 (353)
T ss_dssp             CEEEEECCSEEGGGTT---TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred             EEEEeccccCCHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence            3899999   555543   234999999999999999999999998   999999999999975                


Q ss_pred             ----------CCCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhh-----------hccC-
Q 040682           64 ----------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDL-----------WKDD-  120 (216)
Q Consensus        64 ----------~y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~-  120 (216)
                                .|+|||.+.+ ..++.++||||||+++|+|++|..||........  .......           .... 
T Consensus       178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~  255 (353)
T 3coi_A          178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ--LTQILKVTGVPGTEFVQKLNDKA  255 (353)
T ss_dssp             ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH--HHHHHHHHCBCCHHHHTTCSCHH
T ss_pred             CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHHHhhHH
Confidence                      2999999887 5789999999999999999999999875432111  0000000           0000 


Q ss_pred             ------ccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          121 ------RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       121 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                            .+........  .......+..+.+++.+||+.||++||++.|++++
T Consensus       256 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          256 AKSYIQSLPQTPRKDF--TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HHHHHHTSCBCSSCCT--TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHhCcCCCCccH--HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                  0000000000  01111245678999999999999999999999853

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.93  E-value=7.9e-26  Score=180.26  Aligned_cols=147  Identities=25%  Similarity=0.361  Sum_probs=110.4

Q ss_pred             eeeeecc----cccccccCC--CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK----LLDAANIDK--KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      .++||||    +|.++....  ...+++..+..++.|++.||+|||+++   ++|+||||+||+++.             
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~  170 (295)
T 2clq_A           94 IKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTS  170 (295)
T ss_dssp             EEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTC
T ss_pred             EEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccc
Confidence            5799999    677663333  335678999999999999999999998   999999999999964             


Q ss_pred             -----------------CCCChhhhhcCC--CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 -----------------GYMPPEYALRGF--FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~--~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                       .|+|||.+.+..  ++.++||||||+++|+|++|..||.............  . .      .
T Consensus       171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~-~------~  241 (295)
T 2clq_A          171 KRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV--G-M------F  241 (295)
T ss_dssp             EESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH--H-H------H
T ss_pred             cccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh--c-c------c
Confidence                             189999997653  8899999999999999999999985432211100000  0 0      0


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ...+..+     ...+..+.+++.+||+.+|++||++.++++
T Consensus       242 ~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          242 KVHPEIP-----ESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             CCCCCCC-----TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             ccccccc-----ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            0011111     114557889999999999999999999874

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.93  E-value=7.6e-26  Score=184.90  Aligned_cols=157  Identities=20%  Similarity=0.228  Sum_probs=111.7

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .|+||||   +|.++...  +.+++.++..++.|++.||+|||+++   ++||||||+||+++.+               
T Consensus        89 ~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A           89 VYIIQELMQTDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIID  163 (353)
T ss_dssp             EEEEECCCSEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEeccCccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence            5899999   55555322  46999999999999999999999998   9999999999999641               


Q ss_pred             ------------------------CCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc
Q 040682           65 ------------------------YMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD  119 (216)
Q Consensus        65 ------------------------y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~  119 (216)
                                              |+|||++.+ ..++.++|||||||++|+|++|..||........  ..........
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~  241 (353)
T 2b9h_A          164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ--LLLIFGIIGT  241 (353)
T ss_dssp             ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCC
T ss_pred             cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCC
Confidence                                    899998875 6789999999999999999999999875432111  0000000000


Q ss_pred             C----cc--------ccccc-----cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          120 D----RV--------HELID-----PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       120 ~----~~--------~~~~~-----~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .    ..        .+.+.     +...........+..+.+++.+||+.||++||++.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            0    00        00000     000000011124567899999999999999999999986

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.93  E-value=2.5e-26  Score=184.13  Aligned_cols=144  Identities=24%  Similarity=0.332  Sum_probs=112.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .|+||||    +|.++..  .+.+++.++..++.|++.||+|||+++   ++|+||||+||+++.+              
T Consensus        95 ~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  169 (303)
T 3a7i_A           95 LWIIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQL  169 (303)
T ss_dssp             EEEEEECCTTEEHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceec
Confidence            5899999    6666633  356999999999999999999999998   9999999999999751              


Q ss_pred             ---------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           65 ---------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        65 ---------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                     |+|||.+.+..++.++||||||+++|++++|..||........  ...    .....     .+.
T Consensus       170 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~----~~~~~-----~~~  238 (303)
T 3a7i_A          170 TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV--LFL----IPKNN-----PPT  238 (303)
T ss_dssp             BTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHH----HHHSC-----CCC
T ss_pred             CccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH--HHH----hhcCC-----CCC
Confidence                           8999999999999999999999999999999999864322110  000    00000     011


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ...     ..+..+.+++..||+.+|++||++.++++.
T Consensus       239 ~~~-----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          239 LEG-----NYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             CCS-----SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             Ccc-----ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            111     134568999999999999999999999864

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.93  E-value=6.9e-26  Score=181.49  Aligned_cols=152  Identities=16%  Similarity=0.164  Sum_probs=108.5

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---C-------CCC
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---G-------YMP   67 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---~-------y~a   67 (216)
                      .++||||    +|.++.. .....+++.+++.++.|++.||+|||+++   ++||||||+||+++.   +       |-.
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~  166 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF  166 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEecccc
Confidence            5899999    6666633 33457999999999999999999999998   999999999999986   2       333


Q ss_pred             hhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccc-cchhhHHHHHHHHHH
Q 040682           68 PEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVIT-QDEISLSMLMRYVKV  146 (216)
Q Consensus        68 PE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l  146 (216)
                      .+...+..++.++|||||||++|+|++|..||.........          ............. ........+..+.++
T Consensus       167 a~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  236 (299)
T 3m2w_A          167 AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------PGMKTRIRMGQYEFPNPEWSEVSEEVKML  236 (299)
T ss_dssp             CEECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------------CCSCCSSCTTCCSSCHHHHTTSCHHHHHH
T ss_pred             ccccccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh----------HHHHHHHhhccccCCchhcccCCHHHHHH
Confidence            44445567889999999999999999999998654322110          0000000000000 000111246679999


Q ss_pred             HHhccccCCCCCCCHHHHHHH
Q 040682          147 ALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       147 ~~~cl~~~p~~Rps~~evl~~  167 (216)
                      +.+||+.+|++||++.|++++
T Consensus       237 i~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          237 IRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHcccChhhCCCHHHHhcC
Confidence            999999999999999999863

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.93  E-value=3.7e-26  Score=188.22  Aligned_cols=148  Identities=22%  Similarity=0.259  Sum_probs=111.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .|+||||    +|.++.. ....+++..+..++.|++.||+|||+.+   ++|+||||.||+++.+              
T Consensus       175 ~~lv~e~~~g~~L~~~l~-~~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~  250 (365)
T 2y7j_A          175 MFLVFDLMRKGELFDYLT-EKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHL  250 (365)
T ss_dssp             EEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEecCccccc
Confidence            5899999    6666633 2346999999999999999999999998   9999999999999752              


Q ss_pred             --------------CCChhhhhcC------CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           65 --------------YMPPEYALRG------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        65 --------------y~aPE~~~~~------~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                    |+|||++.+.      .++.++|||||||++|+|++|..||.......  ....    ......  
T Consensus       251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~~~----i~~~~~--  322 (365)
T 2y7j_A          251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL--MLRM----IMEGQY--  322 (365)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH----HHHTCC--
T ss_pred             CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH--HHHH----HHhCCC--
Confidence                          9999998743      57889999999999999999999985432111  0000    101100  


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                        ..  ....+. ..+..+.+++.+||+.+|++||++.|++++
T Consensus       323 --~~--~~~~~~-~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          323 --QF--SSPEWD-DRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             --CC--CHHHHS-SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             --CC--CCcccc-cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence              00  000011 135578999999999999999999999863

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.93  E-value=1.6e-26  Score=193.21  Aligned_cols=149  Identities=19%  Similarity=0.210  Sum_probs=110.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++.......+++..++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       136 ~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~  212 (412)
T 2vd5_A          136 LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKL  212 (412)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheec
Confidence            5899999    666665444457999999999999999999999998   999999999999975               


Q ss_pred             ---------------CCCChhhhh-------cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCc
Q 040682           64 ---------------GYMPPEYAL-------RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDR  121 (216)
Q Consensus        64 ---------------~y~aPE~~~-------~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (216)
                                     .|+|||++.       +..++.++|||||||++|||++|+.||........  ...+..   .. 
T Consensus       213 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~--~~~i~~---~~-  286 (412)
T 2vd5_A          213 RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET--YGKIVH---YK-  286 (412)
T ss_dssp             CTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHHT---HH-
T ss_pred             cCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH--HHHHHh---cc-
Confidence                           299999997       34689999999999999999999999865332111  111100   00 


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHhccccCCCCC---CCHHHHHHH
Q 040682          122 VHELIDPVITQDEISLSMLMRYVKVALLCVQETVADR---PTMSDVVSM  167 (216)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R---ps~~evl~~  167 (216)
                        ..+  ..+  ......+.++.+++.+||. +|.+|   |++.|++++
T Consensus       287 --~~~--~~p--~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          287 --EHL--SLP--LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             --HHC--CCC------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             --cCc--CCC--ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence              000  000  0111245678999999999 99998   588888754

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.93  E-value=4.7e-26  Score=180.25  Aligned_cols=146  Identities=19%  Similarity=0.251  Sum_probs=109.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceee---cC------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---DS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~---~~------------   63 (216)
                      .++||||    +|.++.. ..+.+++.++..++.|++.||+|||+++   ++|+||||+||++   +.            
T Consensus        81 ~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~  156 (277)
T 3f3z_A           81 IYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLA  156 (277)
T ss_dssp             EEEEEECCCSCBHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEEEeccCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence            5899999    5555422 2356899999999999999999999998   9999999999999   32            


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||.+.+. ++.++||||||+++|++++|..||.......  ..    .......      
T Consensus       157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~----~~~~~~~------  223 (277)
T 3f3z_A          157 ARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE--VM----LKIREGT------  223 (277)
T ss_dssp             EECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH----HHHHHCC------
T ss_pred             eeccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH--HH----HHHHhCC------
Confidence                            29999988664 8999999999999999999999986433211  00    0010100      


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ...+..... ..+..+.+++.+||+.+|++||++.++++
T Consensus       224 ~~~~~~~~~-~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          224 FTFPEKDWL-NVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             CCCCHHHHT-TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCCCchhhh-cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000000000 14567899999999999999999999875

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.92  E-value=6.4e-26  Score=184.78  Aligned_cols=129  Identities=20%  Similarity=0.235  Sum_probs=98.7

Q ss_pred             CChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-----------------------------------CCC
Q 040682           22 LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-----------------------------------GYM   66 (216)
Q Consensus        22 l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-----------------------------------~y~   66 (216)
                      +++..++.++.|++.||+|||+++   |+||||||+||+++.                                   .|+
T Consensus       165 ~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~  241 (345)
T 3hko_A          165 QREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFV  241 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCcccc
Confidence            467888899999999999999998   999999999999953                                   189


Q ss_pred             Chhhhhc--CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHH
Q 040682           67 PPEYALR--GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYV  144 (216)
Q Consensus        67 aPE~~~~--~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (216)
                      |||.+.+  ..++.++||||||+++|+|++|..||........     .........       ....... ...+..+.
T Consensus       242 aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-----~~~~~~~~~-------~~~~~~~-~~~~~~~~  308 (345)
T 3hko_A          242 APEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADT-----ISQVLNKKL-------CFENPNY-NVLSPLAR  308 (345)
T ss_dssp             CHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----HHHHHHCCC-------CTTSGGG-GGSCHHHH
T ss_pred             CchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHH-----HHHHHhccc-------ccCCccc-ccCCHHHH
Confidence            9999975  5788999999999999999999999864332211     111111110       0000111 11456789


Q ss_pred             HHHHhccccCCCCCCCHHHHHH
Q 040682          145 KVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       145 ~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      +++.+||+.+|.+||++.++++
T Consensus       309 ~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          309 DLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHHH
T ss_pred             HHHHHHcCCChhHCCCHHHHhc
Confidence            9999999999999999999986

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.92  E-value=9.2e-26  Score=192.33  Aligned_cols=147  Identities=25%  Similarity=0.265  Sum_probs=110.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.+.. ...+.+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        96 ~~lv~e~~~~~~L~~~~-~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  171 (486)
T 3mwu_A           96 FYIVGELYTGGELFDEI-IKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (486)
T ss_dssp             EEEEECCCCSCBHHHHH-HHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred             EEEEEEcCCCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence            5899999    444442 22356999999999999999999999998   999999999999942               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||++.+ .++.++||||+||++|+|++|..||.......  ....    .......    
T Consensus       172 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~----i~~~~~~----  240 (486)
T 3mwu_A          172 TCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--ILKR----VETGKYA----  240 (486)
T ss_dssp             TTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH----HHHTCCC----
T ss_pred             eECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH----HHhCCCC----
Confidence                            2999999876 58999999999999999999999986433211  1111    1111000    


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .  ....+. ..+..+.+++.+||+.+|.+|||+.|++++
T Consensus       241 ~--~~~~~~-~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          241 F--DLPQWR-TISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             S--CSGGGG-GSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             C--CCcccC-CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0  001111 145678999999999999999999999864

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.92  E-value=9.9e-26  Score=189.71  Aligned_cols=149  Identities=23%  Similarity=0.247  Sum_probs=106.3

Q ss_pred             eeeeecc---cccccccCCCCC------CChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------
Q 040682            3 KKLVYSK---LLDAANIDKKRL------LDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~------l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------   63 (216)
                      .|+||||   +|.++.......      .++..++.++.|++.||+|||+++   |+||||||+|||++.          
T Consensus        84 ~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~  160 (434)
T 2rio_A           84 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQT  160 (434)
T ss_dssp             EEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTT
T ss_pred             EEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCccccccccc
Confidence            5899999   666663322211      133456789999999999999998   999999999999941          


Q ss_pred             ------------------------------------CCCChhhhhc-------CCCCcchhhhhHHHHHHHHHh-CCCCC
Q 040682           64 ------------------------------------GYMPPEYALR-------GFFSIKSDVFSFGVLMLEILS-GKKST   99 (216)
Q Consensus        64 ------------------------------------~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~ell~-g~~~~   99 (216)
                                                          .|+|||++.+       ..++.++|||||||++|||++ |..||
T Consensus       161 ~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf  240 (434)
T 2rio_A          161 GAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF  240 (434)
T ss_dssp             CCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCC
Confidence                                                2999999976       568999999999999999999 89898


Q ss_pred             CcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          100 AVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .........   .    ....     ..............+.++.+++.+||+.+|++||++.+|++
T Consensus       241 ~~~~~~~~~---i----~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          241 GDKYSRESN---I----IRGI-----FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             CSTTTHHHH---H----HHTC-----CCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCchhhHHH---H----hcCC-----CCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            543221110   0    0000     00000011112236778999999999999999999999985

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.92  E-value=2.5e-25  Score=191.55  Aligned_cols=148  Identities=20%  Similarity=0.189  Sum_probs=111.9

Q ss_pred             eeeeecc----cccccccC---CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------
Q 040682            3 KKLVYSK----LLDAANID---KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------   63 (216)
                      .|+||||    +|..+...   ....+++..++.++.|++.||+|||+++   |+||||||+|||++.            
T Consensus       260 l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla  336 (543)
T 3c4z_A          260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA  336 (543)
T ss_dssp             EEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeeccee
Confidence            5899999    56555322   2446999999999999999999999998   999999999999975            


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||++.+..++.++|||||||++|||++|..||........ .. ..........     
T Consensus       337 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~-~~~~~i~~~~-----  409 (543)
T 3c4z_A          337 VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NK-ELKQRVLEQA-----  409 (543)
T ss_dssp             EECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HH-HHHHHHHHCC-----
T ss_pred             eeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HH-HHHHHHhhcc-----
Confidence                             29999999999999999999999999999999999975433221 00 1111100000     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCH-----HHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTM-----SDVVS  166 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~evl~  166 (216)
                       ...     +...+..+.+++.+||+.+|++||++     .+|++
T Consensus       410 -~~~-----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          410 -VTY-----PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             -CCC-----CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             -cCC-----CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence             001     11245678999999999999999975     55653

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.92  E-value=5.7e-26  Score=182.21  Aligned_cols=147  Identities=21%  Similarity=0.278  Sum_probs=111.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceee---cC------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL---DS------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~---~~------------   63 (216)
                      .|+||||    +|.++.. ..+.+++.++..++.|++.||+|||+++   ++|+||||+||++   +.            
T Consensus        81 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~  156 (304)
T 2jam_A           81 YYLVMQLVSGGELFDRIL-ERGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLS  156 (304)
T ss_dssp             EEEEECCCCSCBHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred             EEEEEEcCCCccHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence            5899999    5555532 2346899999999999999999999998   9999999999998   32            


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||.+.+..++.++||||||+++|+|++|..||.......  ....    ......    . 
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~----i~~~~~----~-  225 (304)
T 2jam_A          157 KMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK--LFEK----IKEGYY----E-  225 (304)
T ss_dssp             CCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHH----HHHCCC----C-
T ss_pred             eecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--HHHH----HHcCCC----C-
Confidence                           2999999999899999999999999999999999986432211  1111    111100    0 


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       ... ......+..+.+++.+||+.+|++||++.|+++
T Consensus       226 -~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          226 -FES-PFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             -CCT-TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             -CCc-cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             000 011114567899999999999999999999985

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.92  E-value=1.5e-25  Score=191.49  Aligned_cols=147  Identities=24%  Similarity=0.283  Sum_probs=110.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.+.. .....+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       111 ~~lv~e~~~~g~L~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a  186 (494)
T 3lij_A          111 YYLVMECYKGGELFDEI-IHRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLS  186 (494)
T ss_dssp             EEEEEECCCSCBHHHHH-HHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEEEEecCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence            5899999    444442 23356899999999999999999999998   999999999999953               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||++. ..++.++||||+||++|+|++|..||.......  ....    ......     
T Consensus       187 ~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~----i~~~~~-----  254 (494)
T 3lij_A          187 AVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE--ILRK----VEKGKY-----  254 (494)
T ss_dssp             EECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH----HHHTCC-----
T ss_pred             eECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH----HHhCCC-----
Confidence                            299999876 468999999999999999999999986433211  1111    111100     


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       ......+. ..+..+.+++.+||+.+|.+|||+.|++++
T Consensus       255 -~~~~~~~~-~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          255 -TFDSPEWK-NVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             -CCCSGGGT-TSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             -CCCchhcc-cCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence             00011111 145678999999999999999999999853

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.92  E-value=4.7e-26  Score=180.07  Aligned_cols=144  Identities=21%  Similarity=0.270  Sum_probs=109.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++... .+.+++.++..++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        86 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~  161 (276)
T 2h6d_A           86 FFMVMEYVSGGELFDYICK-HGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM  161 (276)
T ss_dssp             EEEEEECCCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred             EEEEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeeccccccc
Confidence            5899999    66666332 346899999999999999999999998   999999999999975               


Q ss_pred             -------------CCCChhhhhcCCC-CcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 -------------GYMPPEYALRGFF-SIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~-~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                   .|+|||.+.+..+ +.++||||||+++|+|++|..||.......  .    ........      ..
T Consensus       162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~----~~~~~~~~------~~  229 (276)
T 2h6d_A          162 SDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--L----FKKIRGGV------FY  229 (276)
T ss_dssp             CC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H----HHHHHHCC------CC
T ss_pred             CCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--H----HHHhhcCc------cc
Confidence                         2999999988765 589999999999999999999985422111  1    11111110      00


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .+     ......+.+++.+||+.+|++||++.+++++
T Consensus       230 ~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          230 IP-----EYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             CC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             Cc-----hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            11     1134568899999999999999999999874

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.92  E-value=7.4e-26  Score=183.10  Aligned_cols=138  Identities=20%  Similarity=0.354  Sum_probs=107.9

Q ss_pred             eeeeecc-----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec-C-------------
Q 040682            3 KKLVYSK-----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD-S-------------   63 (216)
Q Consensus         3 ~~lV~Ey-----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~-~-------------   63 (216)
                      .++||||     +|.++. ...+.+++.+++.++.|++.||+|||+++   |+||||||+||+++ .             
T Consensus       123 ~~lv~e~~~~~~~L~~~l-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~  198 (320)
T 3a99_A          123 FVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGA  198 (320)
T ss_dssp             EEEEEECCSSEEEHHHHH-HHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEEEEEcCCCCccHHHHH-hccCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence            5789998     344442 23456899999999999999999999998   99999999999997 3             


Q ss_pred             --------------CCCChhhhhcCCC-CcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 --------------GYMPPEYALRGFF-SIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~-~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                    .|+|||.+.+..+ +.++||||||+++|||++|..||.....           ..... .      
T Consensus       199 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----------~~~~~-~------  260 (320)
T 3a99_A          199 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----------IIRGQ-V------  260 (320)
T ss_dssp             ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----------HHHCC-C------
T ss_pred             ccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----------hhccc-c------
Confidence                          1999999987765 6888999999999999999999853210           00000 0      


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .. ..    ..+..+.+++.+||+.+|++||++.|+++.
T Consensus       261 ~~-~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          261 FF-RQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             CC-SS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             cc-cc----cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00 01    134568899999999999999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.92  E-value=2.9e-25  Score=176.71  Aligned_cols=146  Identities=25%  Similarity=0.273  Sum_probs=109.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.+... ....+++.+++.++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        96 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~  171 (287)
T 2wei_A           96 FYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (287)
T ss_dssp             EEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred             EEEEEEccCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcc
Confidence            5899999    5544422 2346899999999999999999999998   999999999999953               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||.+.+ .++.++||||||+++|++++|..||.......  .    ..........    
T Consensus       172 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~----~~~~~~~~~~----  240 (287)
T 2wei_A          172 TCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--I----LKRVETGKYA----  240 (287)
T ss_dssp             GTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H----HHHHHHCCCC----
T ss_pred             eeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH--H----HHHHHcCCCC----
Confidence                            2999998876 48999999999999999999999986433211  1    1111111100    


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ...  ... ...+..+.+++.+||+.+|++||++.|+++
T Consensus       241 ~~~--~~~-~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          241 FDL--PQW-RTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             CCS--GGG-TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCc--hhh-hhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            000  000 114567899999999999999999999986

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.92  E-value=1.2e-25  Score=192.53  Aligned_cols=146  Identities=25%  Similarity=0.306  Sum_probs=110.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.+.. ...+.+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       121 ~~lv~e~~~gg~L~~~l-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  196 (504)
T 3q5i_A          121 FYLVTEFYEGGELFEQI-INRHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLS  196 (504)
T ss_dssp             EEEEEECCTTCBHHHHH-HHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEEECCCTTC
T ss_pred             EEEEEecCCCCcHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEEEEECCCC
Confidence            5899999    454442 22356999999999999999999999998   999999999999963               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||++. ..++.++||||+||++|+|++|..||.......  ..    ........     
T Consensus       197 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~----~~i~~~~~-----  264 (504)
T 3q5i_A          197 SFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD--II----KKVEKGKY-----  264 (504)
T ss_dssp             EECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH----HHHHHCCC-----
T ss_pred             EEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH--HH----HHHHcCCC-----
Confidence                            299999886 468999999999999999999999986533211  11    11111100     


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       ......+. ..+..+.+++.+||+.+|.+|||+.|+++
T Consensus       265 -~~~~~~~~-~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          265 -YFDFNDWK-NISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             -CCCHHHHT-TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -CCCccccC-CCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence             00001111 14567899999999999999999999985

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.92  E-value=2.1e-25  Score=178.18  Aligned_cols=147  Identities=22%  Similarity=0.234  Sum_probs=111.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.. ....+++.++..++.|++.||+|||+++   ++|+||||+||+++.+              
T Consensus        99 ~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  174 (298)
T 1phk_A           99 FFLVFDLMKKGELFDYLT-EKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQL  174 (298)
T ss_dssp             EEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEeccCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccchhhc
Confidence            5899999    6666633 2356899999999999999999999998   9999999999999752              


Q ss_pred             --------------CCChhhhh------cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           65 --------------YMPPEYAL------RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        65 --------------y~aPE~~~------~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                    |+|||++.      ...++.++||||||+++|+|++|..||.......  .    .........  
T Consensus       175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~----~~~~~~~~~--  246 (298)
T 1phk_A          175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML--M----LRMIMSGNY--  246 (298)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H----HHHHHHTCC--
T ss_pred             CCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH--H----HHHHhcCCc--
Confidence                          89999886      3468899999999999999999999985432111  0    000111100  


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                          ....... ...+..+.+++.+||+.+|++||++.|+++
T Consensus       247 ----~~~~~~~-~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          247 ----QFGSPEW-DDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             ----CCCTTTG-GGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ----ccCcccc-cccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence                0000111 124567899999999999999999999875

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.92  E-value=1.1e-25  Score=188.09  Aligned_cols=147  Identities=16%  Similarity=0.162  Sum_probs=110.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++..  ...+++..++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       144 ~~lV~E~~~gg~L~~~l~--~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~  218 (410)
T 3v8s_A          144 LYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM  218 (410)
T ss_dssp             EEEEECCCTTEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEeCCCCCcHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEee
Confidence            5899999    6666533  245899999999999999999999998   999999999999965               


Q ss_pred             ---------------CCCChhhhhcCC----CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 ---------------GYMPPEYALRGF----FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~----~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                     .|+|||++.+..    ++.++|||||||++|||++|..||........  ...+   .....   
T Consensus       219 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~--~~~i---~~~~~---  290 (410)
T 3v8s_A          219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT--YSKI---MNHKN---  290 (410)
T ss_dssp             CTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHH---HTHHH---
T ss_pred             ccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH--HHHH---Hhccc---
Confidence                           299999998765    78999999999999999999999964332111  1111   00000   


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVAD--RPTMSDVVSM  167 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~evl~~  167 (216)
                        ....+   .....+..+.+++.+||+.+|.+  ||++.||+++
T Consensus       291 --~~~~p---~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          291 --SLTFP---DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             --HCCCC---TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             --cccCC---CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence              00000   00014567899999999988888  9999999865

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.92  E-value=3.6e-25  Score=176.73  Aligned_cols=147  Identities=19%  Similarity=0.232  Sum_probs=108.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.+++.++.|++.||+|||+++   ++|+||||+||+++.               
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~  166 (303)
T 1zy4_A           90 LFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNV  166 (303)
T ss_dssp             EEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCCCSCT
T ss_pred             eEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeCcchhhc
Confidence            5899999    777775555567889999999999999999999998   999999999999864               


Q ss_pred             ----------------------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhh
Q 040682           64 ----------------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAW  114 (216)
Q Consensus        64 ----------------------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~  114 (216)
                                                  .|+|||.+.+. .++.++||||||+++|+|++   |+.....    .... .
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~----~~~~-~  238 (303)
T 1zy4_A          167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME----RVNI-L  238 (303)
T ss_dssp             TC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH----HHHH-H
T ss_pred             ccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh----HHHH-H
Confidence                                        18999999865 68999999999999999998   3321100    0000 0


Q ss_pred             hhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          115 DLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ......      ....+.. .+......+.+++.+||+.||++||++.+++++
T Consensus       239 ~~~~~~------~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          239 KKLRSV------SIEFPPD-FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHHHST------TCCCCTT-CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             Hhcccc------ccccCcc-ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            111110      0011111 111245568899999999999999999999863

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.91  E-value=3e-25  Score=178.56  Aligned_cols=138  Identities=20%  Similarity=0.319  Sum_probs=108.1

Q ss_pred             eeeeecc-----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeec-C-------------
Q 040682            3 KKLVYSK-----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD-S-------------   63 (216)
Q Consensus         3 ~~lV~Ey-----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~-~-------------   63 (216)
                      .++||||     +|.++... .+.+++.+++.++.|++.||+|||+++   ++|+||||+||+++ .             
T Consensus       113 ~~~v~e~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~dfg~~~  188 (312)
T 2iwi_A          113 FMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGA  188 (312)
T ss_dssp             CEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEECCCSSCE
T ss_pred             EEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEEEcchhh
Confidence            4788887     55555332 346999999999999999999999998   99999999999997 3             


Q ss_pred             --------------CCCChhhhhcCCCC-cchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 --------------GYMPPEYALRGFFS-IKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 --------------~y~aPE~~~~~~~~-~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                    .|+|||++.+..+. .++||||||+++|++++|+.||.....        .   . ...      .
T Consensus       189 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~---~-~~~------~  250 (312)
T 2iwi_A          189 LLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--------I---L-EAE------L  250 (312)
T ss_dssp             ECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------H---H-HTC------C
T ss_pred             hcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--------H---h-hhc------c
Confidence                          29999999877664 589999999999999999999853110        0   0 000      0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..     +......+.+++.+||+.+|++||++.|++++
T Consensus       251 ~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          251 HF-----PAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             CC-----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             CC-----cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00     01134568899999999999999999999873

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.91  E-value=2.8e-24  Score=190.12  Aligned_cols=139  Identities=18%  Similarity=0.266  Sum_probs=107.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++..   ..+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       159 ~~lv~E~~~g~~L~~~~~---~~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~~~kl~DFG~a~~~~  232 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKG---QKLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEEQLKLIDLGAVSRIN  232 (681)
T ss_dssp             EEEEEECCCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSSCEEECCCTTCEETT
T ss_pred             eEEEEEeCCCCcHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCCcEEEEecccchhcc
Confidence            5999999    6665532   26999999999999999999999998   999999999999975               


Q ss_pred             ---------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccccch
Q 040682           64 ---------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDE  134 (216)
Q Consensus        64 ---------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (216)
                               .|+|||++.+.. +.++|||||||++|+|++|..|+.......               +        ....
T Consensus       233 ~~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~---------------~--------~~~~  288 (681)
T 2pzi_A          233 SFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG---------------L--------PEDD  288 (681)
T ss_dssp             CCSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS---------------C--------CTTC
T ss_pred             cCCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc---------------c--------cccc
Confidence                     399999987764 889999999999999999988764211000               0        0111


Q ss_pred             hhHHHHHHHHHHHHhccccCCCCCCC-HHHHHHHHccc
Q 040682          135 ISLSMLMRYVKVALLCVQETVADRPT-MSDVVSMISNE  171 (216)
Q Consensus       135 ~~~~~~~~~~~l~~~cl~~~p~~Rps-~~evl~~L~~~  171 (216)
                      ........+.+++.+||+.+|++||+ +.++...|.+.
T Consensus       289 ~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          289 PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence            11224567899999999999999995 56666666654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.90  E-value=1.6e-24  Score=189.58  Aligned_cols=158  Identities=22%  Similarity=0.199  Sum_probs=108.7

Q ss_pred             eeeeecc----cccccccC--CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK----LLDAANID--KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      .|+||||    +|.++...  ....+++..++.++.|++.||+|||+.+   |+||||||+||+++.             
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEcccc
Confidence            4799999    67766333  2336999999999999999999999998   999999999999973             


Q ss_pred             ------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc---hhhhhhhh-hccCc
Q 040682           64 ------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN---LLGHAWDL-WKDDR  121 (216)
Q Consensus        64 ------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~---~~~~~~~~-~~~~~  121 (216)
                                        .|+|||.+.+..++.++||||||+++|++++|..||.........   ........ .....
T Consensus       170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~  249 (676)
T 3qa8_A          170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDD  249 (676)
T ss_dssp             CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCC
T ss_pred             cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhh
Confidence                              289999999999999999999999999999999998643211000   00000000 00000


Q ss_pred             cccc--cccc-cccchhhHHHHHHHHHHHHhccccCCCCCCCHHH
Q 040682          122 VHEL--IDPV-ITQDEISLSMLMRYVKVALLCVQETVADRPTMSD  163 (216)
Q Consensus       122 ~~~~--~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~e  163 (216)
                      ....  +... ..........+..+.+++.+||+.||++||++.|
T Consensus       250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e  294 (676)
T 3qa8_A          250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ  294 (676)
T ss_dssp             CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred             hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence            0000  0000 1111122225678999999999999999999976

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.84  E-value=5.1e-21  Score=155.53  Aligned_cols=142  Identities=11%  Similarity=0.068  Sum_probs=100.7

Q ss_pred             eeeeecc-----cccccccCCCCCCChHHHHHHHHHHHHHHHhhh-cCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK-----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLH-QYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey-----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      .||||||     +++.+   .++.+++.+++.++.|++.||+||| +++   |+||||||+|||++.             
T Consensus       137 ~~lv~E~~~~g~ll~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~  210 (336)
T 2vuw_A          137 LFIVLEFEFGGIDLEQM---RTKLSSLATAKSILHQLTASLAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGK  210 (336)
T ss_dssp             EEEEEEEECCCEETGGG---TTTCCCHHHHHHHHHHHHHHHHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTE
T ss_pred             EEEEEEecCCCccHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCc
Confidence            6899999     33333   2356899999999999999999999 888   999999999999852             


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHH-HHHHHhCCCCCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVL-MLEILSGKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~-l~ell~g~~~~~~~~~~~~~~~~  111 (216)
                                                     .|+|||++.+.. +.++||||+|++ .+++++|..||...        .
T Consensus       211 ~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~  281 (336)
T 2vuw_A          211 SSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------L  281 (336)
T ss_dssp             EEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------H
T ss_pred             cccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch--------h
Confidence                                           299999998776 889999998777 67778888886310        0


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVV  165 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl  165 (216)
                      |. .........................+..+.+|+.+||+.+     |+.|++
T Consensus       282 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          282 WL-HYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HH-HHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             hh-hHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence            00 0000000000001111112233447889999999999866     888887

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.65  E-value=1.3e-17  Score=144.58  Aligned_cols=86  Identities=20%  Similarity=0.162  Sum_probs=55.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .||||||    +|.++... .+.++..   .|+.||+.||+|+|++|   ||||||||+|||++.+              
T Consensus       317 ~yLVMEyv~G~~L~d~i~~-~~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~  389 (569)
T 4azs_A          317 GWLVMEKLPGRLLSDMLAA-GEEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTT  389 (569)
T ss_dssp             EEEEEECCCSEEHHHHHHT-TCCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred             EEEEEecCCCCcHHHHHHh-CCCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeC
Confidence            6999999    77777433 3556654   48899999999999999   9999999999999762              


Q ss_pred             ---------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCC
Q 040682           65 ---------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK   96 (216)
Q Consensus        65 ---------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~   96 (216)
                                     |++||++.+. +..++|+|++|++.+++.++.
T Consensus       390 ~~~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          390 PQDCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             C---CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred             CCCCccccCceechhhccHHHhCCC-CCCcccccccccchhhhcccc
Confidence                           8889988654 566789999998876655443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.30  E-value=6.6e-13  Score=114.41  Aligned_cols=85  Identities=21%  Similarity=0.194  Sum_probs=70.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++...         +..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus       414 ~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~~~kL~DFGla~~~~~  481 (540)
T 3en9_A          414 KRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDKDLYIIDFGLGKISNL  481 (540)
T ss_dssp             TEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESSSEEECCCTTCEECCC
T ss_pred             cEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECCeEEEEECccCEECCC
Confidence            4899999    66666333         5689999999999999998   999999999999864               


Q ss_pred             -------------------CCCChhhhhc--CCCCcchhhhhHHHHHHHHHhCCCCC
Q 040682           64 -------------------GYMPPEYALR--GFFSIKSDVFSFGVLMLEILSGKKST   99 (216)
Q Consensus        64 -------------------~y~aPE~~~~--~~~~~~~Dv~s~G~~l~ell~g~~~~   99 (216)
                                         .|+|||++.+  ..|+..+|+|+..+-..+-..++.++
T Consensus       482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence                               2889999987  46788889999888888777666543

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.03  E-value=8.2e-11  Score=93.26  Aligned_cols=50  Identities=16%  Similarity=0.233  Sum_probs=41.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+||||    +|.++        .......++.|++.||+|||+.+   |+||||||+|||++.
T Consensus       175 ~~lvmE~~~g~~L~~l--------~~~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~~  228 (282)
T 1zar_A          175 NAVLMELIDAKELYRV--------RVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVSE  228 (282)
T ss_dssp             TEEEEECCCCEEGGGC--------CCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEET
T ss_pred             eEEEEEecCCCcHHHc--------chhhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEEC
Confidence            4899999    55553        12335579999999999999998   999999999999973

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.75  E-value=4e-09  Score=82.32  Aligned_cols=57  Identities=18%  Similarity=0.190  Sum_probs=42.6

Q ss_pred             eeeeecccc------cccccCCCCCCChHHHHHHHHHHHHHHHhhh-cCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSKLL------DAANIDKKRLLDWQVRARIIEGIAQGLLYLH-QYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey~l------~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~iiH~dik~~nil~~~   63 (216)
                      .+|||||.-      ..+ .......++..+..++.|++.||.||| +.+   |+||||||.|||++.
T Consensus       143 ~~lVmE~~g~~g~~~~~L-~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrDlkp~NILl~~  206 (258)
T 1zth_A          143 NVLLMEFIGEDELPAPTL-VELGRELKELDVEGIFNDVVENVKRLYQEAE---LVHADLSEYNIMYID  206 (258)
T ss_dssp             TEEEEECCEETTEECCBH-HHHGGGGGGSCHHHHHHHHHHHHHHHHHTSC---EECSSCSTTSEEESS
T ss_pred             CEEEEEecCCCCCccccH-HHHhhccChHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEEcC
Confidence            479999921      122 110111345678899999999999999 888   999999999999976

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.64  E-value=1.8e-08  Score=83.01  Aligned_cols=51  Identities=22%  Similarity=0.250  Sum_probs=40.5

Q ss_pred             eeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            4 KLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      +|||||    .|..+       ........++.|++.+|.+||..|   ||||||||.|||++.+
T Consensus       187 ~LVME~i~G~~L~~l-------~~~~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~d  241 (397)
T 4gyi_A          187 TIVMSLVDALPMRQV-------SSVPDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREE  241 (397)
T ss_dssp             EEEEECCSCEEGGGC-------CCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEE
T ss_pred             eEEEEecCCccHhhh-------cccHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCC
Confidence            599999    44333       122334678899999999999998   9999999999999753

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.37  E-value=9.8e-05  Score=58.50  Aligned_cols=39  Identities=21%  Similarity=0.087  Sum_probs=27.4

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ   43 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~   43 (216)
                      +.|+||||    .+...   ....++..++..++.+++..|+.||+
T Consensus        90 ~~~~vm~~i~G~~l~~~---~~~~l~~~~~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A           90 MSFAGFTKIKGVPLTPL---LLNNLPKQSQNQAAKDLARFLSELHS  132 (304)
T ss_dssp             CSCEEEECCCCEECCHH---HHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEcccCCeECCcc---ccccCCHHHHHHHHHHHHHHHHHHHc
Confidence            45788888    33322   11346778888888999988888886

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.26  E-value=0.00038  Score=56.38  Aligned_cols=41  Identities=7%  Similarity=-0.086  Sum_probs=29.6

Q ss_pred             eeeeecc-cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc
Q 040682            3 KKLVYSK-LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ   43 (216)
Q Consensus         3 ~~lV~Ey-~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~   43 (216)
                      .|+|||| ....+.......++..++..++.+++..|+.||+
T Consensus       116 ~~~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          116 AFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             CEEEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhC
Confidence            6899999 3222211122347888899999999999999997

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.25  E-value=0.00069  Score=51.05  Aligned_cols=85  Identities=11%  Similarity=-0.032  Sum_probs=53.7

Q ss_pred             cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------CCCChhhhhc
Q 040682           10 LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------GYMPPEYALR   73 (216)
Q Consensus        10 ~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------~y~aPE~~~~   73 (216)
                      +|.+++.....++++.+++.++.|.+.+|.-+-.+...  ..+=+.|..|++..                .+.+||... 
T Consensus        34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~~~s~~~~~~~~~pe~~~-  110 (229)
T 2yle_A           34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAPAADDAGEPPPVAGKLGY-  110 (229)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECCC------------CCSS-
T ss_pred             cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceecccccccccccCCCChhhcc-
Confidence            67777777788999999999999999998776211100  01112234555433                156676542 


Q ss_pred             CCCCcchhhhhHHHHHHHHHhCCC
Q 040682           74 GFFSIKSDVFSFGVLMLEILSGKK   97 (216)
Q Consensus        74 ~~~~~~~Dv~s~G~~l~ell~g~~   97 (216)
                      ...+.+.-|||+|+++|.-+--..
T Consensus       111 ~~~te~~~IysLG~tLY~ALDygL  134 (229)
T 2yle_A          111 SQCMETEVIESLGIIIYKALDYGL  134 (229)
T ss_dssp             SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred             ccchHHHHHHHHHHHHHHHhhcCC
Confidence            234677889999999998886443

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.08  E-value=0.00036  Score=53.79  Aligned_cols=35  Identities=29%  Similarity=0.287  Sum_probs=24.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhc
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQ   43 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~   43 (216)
                      .|+||||    ++....      .+......++.+++++|+.||+
T Consensus        85 ~~lv~e~i~G~~l~~~~------~~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           85 SNLLMSEADGVLCSEEY------EDEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             EEEEEECCSSEEHHHHC------CTTTCHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCeehhhcc------CCcccHHHHHHHHHHHHHHHhC
Confidence            5899999    444331      1223345788999999999998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.36  E-value=0.0023  Score=48.78  Aligned_cols=16  Identities=31%  Similarity=0.625  Sum_probs=14.7

Q ss_pred             eecCCCCCCceeecCC
Q 040682           49 IIHRDLKASNILLDSG   64 (216)
Q Consensus        49 iiH~dik~~nil~~~~   64 (216)
                      ++|+|++|.||+++.+
T Consensus       186 l~HgDl~~~Nil~~~~  201 (264)
T 1nd4_A          186 VTHGDACLPNIMVENG  201 (264)
T ss_dssp             EECSSCCGGGEEEETT
T ss_pred             EECCCCCCCcEEEECC
Confidence            9999999999999764

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=92.92  E-value=0.09  Score=41.41  Aligned_cols=16  Identities=38%  Similarity=0.648  Sum_probs=14.4

Q ss_pred             CeecCCCCCCceeecC
Q 040682           48 RIIHRDLKASNILLDS   63 (216)
Q Consensus        48 ~iiH~dik~~nil~~~   63 (216)
                      .++|+|+.+.||+++.
T Consensus       191 ~~~HgD~~~~N~l~~~  206 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNL  206 (306)
T ss_dssp             EEECSCCSGGGEEECT
T ss_pred             eeEeCCCCcccEEEec
Confidence            4699999999999986

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=90.06  E-value=0.53  Score=37.53  Aligned_cols=17  Identities=18%  Similarity=0.341  Sum_probs=15.0

Q ss_pred             CCeecCCCCCCceeecC
Q 040682           47 LRIIHRDLKASNILLDS   63 (216)
Q Consensus        47 ~~iiH~dik~~nil~~~   63 (216)
                      ..++|+|+.+.||+++.
T Consensus       222 ~~l~HgDl~~~Nil~~~  238 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRD  238 (357)
T ss_dssp             CEEECSSCSGGGEEEET
T ss_pred             ceEEeCCCCCCeEEEeC
Confidence            45899999999999974

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=89.81  E-value=0.28  Score=37.41  Aligned_cols=16  Identities=31%  Similarity=0.760  Sum_probs=14.4

Q ss_pred             eecCCCCCCceeecCC
Q 040682           49 IIHRDLKASNILLDSG   64 (216)
Q Consensus        49 iiH~dik~~nil~~~~   64 (216)
                      ++|+|+.+.|||++.+
T Consensus       195 l~HGDl~~~Nil~~~~  210 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDEG  210 (272)
T ss_dssp             EECSCCCTTSEEEETT
T ss_pred             EEcCCCCCCeEEEECC
Confidence            7999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	216
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-25
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-25
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-23
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-22
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-22
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-22
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	7e-22
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-21
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-21
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-21
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-21
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	8e-21
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-20
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-20
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-20
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-20
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-20
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	7e-20
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-19
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-19
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-19
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-18
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-18
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-18
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-18
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-17
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-17
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-17
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-16
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-16
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-16
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-15
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-15
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-14
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-13
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-13
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-13
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	6e-13
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-12
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-12
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-11
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-11
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-11
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	9e-11
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-10
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-10
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-09
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-09
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-09
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-09
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	5e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-08
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	8e-08
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-07
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-06
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	7e-06
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-06
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	3e-04

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.2 bits (241), Expect = 6e-25
 Identities = 32/202 (15%), Positives = 58/202 (28%), Gaps = 49/202 (24%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQ-----YSRLRIIHRDLKASNILLDS--------- 63
            +  +  +   ++    A GL +LH        +  I HRDLK+ NIL+           
Sbjct: 93  NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152

Query: 64  ------------------------GYMPPEYAL------RGFFSIKSDVFSFGVLMLEIL 93
                                    YM PE               ++D+++ G++  EI 
Sbjct: 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212

Query: 94  SGKKSTAVYNTGSF-----NLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVAL 148
                  ++               + +  +     + + P I     S   L    K+  
Sbjct: 213 RRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR 272

Query: 149 LCVQETVADRPTMSDVVSMISN 170
            C     A R T   +   +S 
Sbjct: 273 ECWYANGAARLTALRIKKTLSQ 294

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.2 bits (239), Expect = 8e-25
 Identities = 34/186 (18%), Positives = 72/186 (38%), Gaps = 48/186 (25%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------- 63
             +   +      I    AQG+ YLH      IIHRDLK++NI L               
Sbjct: 96  IIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 152

Query: 64  ------------------GYMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVY 102
                              +M PE      +  +S +SDV++FG+++ E+++G+      
Sbjct: 153 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL----- 207

Query: 103 NTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMS 162
               ++ + +   +         + P +++   +    M+  ++   C+++   +RP   
Sbjct: 208 ---PYSNINNRDQIIF-MVGRGYLSPDLSKVRSNCPKAMK--RLMAECLKKKRDERPLFP 261

Query: 163 DVVSMI 168
            +++ I
Sbjct: 262 QILASI 267

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.6 bits (227), Expect = 5e-23
 Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 48/191 (25%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
           L+D         L       +   IA+G+ ++ +      IHRDL+A+NIL+        
Sbjct: 94  LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKI 150

Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST 99
                                    +  PE    G F+IKSDV+SFG+L+ EI++  +  
Sbjct: 151 ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI- 209

Query: 100 AVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRP 159
                  +  + +   +   +R + ++ P    D     +     ++  LC +E   DRP
Sbjct: 210 ------PYPGMTNPEVIQNLERGYRMVRP----DNCPEEL----YQLMRLCWKERPEDRP 255

Query: 160 TMSDVVSMISN 170
           T   + S++ +
Sbjct: 256 TFDYLRSVLED 266

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.9 bits (220), Expect = 4e-22
 Identities = 32/179 (17%), Positives = 69/179 (38%), Gaps = 44/179 (24%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           + + +++  +V       I +GL +LH  +   IIHRDLK  NI +              
Sbjct: 103 LKRFKVMKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGL 161

Query: 64  ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF 107
                            +M PE      +    DV++FG+ MLE+ + +          +
Sbjct: 162 ATLKRASFAKAVIGTPEFMAPEM-YEEKYDESVDVYAFGMCMLEMATSEY--------PY 212

Query: 108 NLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS 166
           +   +A  +++  RV   + P          +     ++   C+++   +R ++ D+++
Sbjct: 213 SECQNAAQIYR--RVTSGVKPASFDKVAIPEV----KEIIEGCIRQNKDERYSIKDLLN 265

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.7 bits (219), Expect = 5e-22
 Identities = 42/200 (21%), Positives = 73/200 (36%), Gaps = 50/200 (25%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------- 63
             +K           ++ GIA G+ YL     +  +HRDL A NIL++S           
Sbjct: 100 LREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGL 156

Query: 64  ---------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVY 102
                                 +  PE      F+  SDV+SFG++M E+++  +     
Sbjct: 157 SRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE----- 211

Query: 103 NTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMS 162
                      +    +  V + I+    +    +       ++ + C Q+  A RP  +
Sbjct: 212 ---------RPYWELSNHEVMKAINDGF-RLPTPMDCPSAIYQLMMQCWQQERARRPKFA 261

Query: 163 DVVSMISNEHLNLCSLKKLA 182
           D+VS++        SLK LA
Sbjct: 262 DIVSILDKLIRAPDSLKTLA 281

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (221), Expect = 6e-22
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 29/108 (26%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           + K   +  Q+  ++   + +GL YL    + +I+HRD+K SNIL++S            
Sbjct: 95  LKKAGRIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152

Query: 64  ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                           YM PE      +S++SD++S G+ ++E+  G+
Sbjct: 153 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.2 bits (218), Expect = 7e-22
 Identities = 37/189 (19%), Positives = 64/189 (33%), Gaps = 48/189 (25%)

Query: 11  LDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------- 63
           L      ++ L   +    +   + +G+ YL +     +IHRDL A N L+         
Sbjct: 87  LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVS 143

Query: 64  -----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTA 100
                                   +  PE      +S KSDV+SFGVLM E+ S  K   
Sbjct: 144 DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 203

Query: 101 VYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPT 160
              +       ++  +        L  P +    +         ++   C +E   DRP 
Sbjct: 204 ENRS-------NSEVVEDISTGFRLYKPRLASTHV--------YQIMNHCWKERPEDRPA 248

Query: 161 MSDVVSMIS 169
            S ++  ++
Sbjct: 249 FSRLLRQLA 257

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 1e-21
 Identities = 33/189 (17%), Positives = 60/189 (31%), Gaps = 48/189 (25%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
           L+D      + +L      +    + + + YL        +HRDL A N+L+        
Sbjct: 88  LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKV 144

Query: 64  --------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
                                +  PE      FS KSDV+SFG+L+ EI S  +      
Sbjct: 145 SDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP---- 200

Query: 104 TGSFNLLGHAWDLWKDDRVHELIDPVITQDEISL--SMLMRYVKVALLCVQETVADRPTM 161
                        +    + +++  V    ++           +V   C     A RP+ 
Sbjct: 201 -------------YPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSF 247

Query: 162 SDVVSMISN 170
             +   + +
Sbjct: 248 LQLREQLEH 256

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.0 bits (217), Expect = 2e-21
 Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 53/187 (28%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------- 63
           +      L    +  I   +A G+ YL +    + +HRDL   N L+             
Sbjct: 130 SSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGL 186

Query: 64  --------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
                                +MPPE      ++ +SDV+++GV++ EI S         
Sbjct: 187 SRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP---- 242

Query: 104 TGSFNLLGHAWDLWKDDRVHELIDPVITQD--EISLSMLMRYVKVALLCVQETVADRPTM 161
                        +      E+I  V   +      +  +    +  LC  +  ADRP+ 
Sbjct: 243 -------------YYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSF 289

Query: 162 SDVVSMI 168
             +  ++
Sbjct: 290 CSIHRIL 296

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 3e-21
 Identities = 38/200 (19%), Positives = 64/200 (32%), Gaps = 48/200 (24%)

Query: 3   KKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD 62
              + SK   A   D +  LD +        +A+G+ +L        IHRDL A NILL 
Sbjct: 123 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLT 179

Query: 63  S-------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLE 91
                                            +M PE      ++ +SDV+S+G+ + E
Sbjct: 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 239

Query: 92  ILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCV 151
           + S   S                 +  D + +++I     +             +   C 
Sbjct: 240 LFSLGSS-------------PYPGMPVDSKFYKMIKEGF-RMLSPEHAPAEMYDIMKTCW 285

Query: 152 QETVADRPTMSDVVSMISNE 171
                 RPT   +V +I  +
Sbjct: 286 DADPLKRPTFKQIVQLIEKQ 305

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 7e-21
 Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 48/191 (25%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
           LLD    +  + L       +   IA G+ Y+ +      +HRDL+A+NIL+        
Sbjct: 98  LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKV 154

Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST 99
                                    +  PE AL G F+IKSDV+SFG+L+ E+ +  +  
Sbjct: 155 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR-- 212

Query: 100 AVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRP 159
                         +    +  V + ++    +             +   C ++   +RP
Sbjct: 213 ------------VPYPGMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWRKEPEERP 259

Query: 160 TMSDVVSMISN 170
           T   + + + +
Sbjct: 260 TFEYLQAFLED 270

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 8e-21
 Identities = 33/199 (16%), Positives = 61/199 (30%), Gaps = 54/199 (27%)

Query: 7   YSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--- 63
           Y         +   +L ++        +A+G+ +L        +HRDL A N+L+     
Sbjct: 146 YENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKV 202

Query: 64  ----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSG 95
                                        +M PE    G ++IKSDV+S+G+L+ EI S 
Sbjct: 203 VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL 262

Query: 96  KKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQD---EISLSMLMRYVKVALLCVQ 152
             +                  +    V      +I      +           +   C  
Sbjct: 263 GVN-----------------PYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWA 305

Query: 153 ETVADRPTMSDVVSMISNE 171
                RP+  ++ S +  +
Sbjct: 306 FDSRKRPSFPNLTSFLGCQ 324

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.8 bits (209), Expect = 3e-20
 Identities = 40/193 (20%), Positives = 64/193 (33%), Gaps = 51/193 (26%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
            L     ++      +        +A+G+      +  + +HRDL A N +LD       
Sbjct: 115 DLRNFIRNETHNPTVKDLIGFGLQVAKGM---KFLASKKFVHRDLAARNCMLDEKFTVKV 171

Query: 64  ---------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                       +M  E      F+ KSDV+SFGVL+ E+++  
Sbjct: 172 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 231

Query: 97  KSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVA 156
                      N       L +  R   L+ P    D +         +V L C      
Sbjct: 232 A----PPYPDVNTFDITVYLLQGRR---LLQPEYCPDPL--------YEVMLKCWHPKAE 276

Query: 157 DRPTMSDVVSMIS 169
            RP+ S++VS IS
Sbjct: 277 MRPSFSELVSRIS 289

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.4 bits (208), Expect = 3e-20
 Identities = 39/199 (19%), Positives = 63/199 (31%), Gaps = 50/199 (25%)

Query: 11  LDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------- 63
           L    + K+  +     A ++  ++ G+ YL +      +HRDL A N+LL +       
Sbjct: 95  LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKIS 151

Query: 64  -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS 98
                                     +  PE      FS +SDV+S+GV M E LS  + 
Sbjct: 152 DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ- 210

Query: 99  TAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADR 158
                          +   K   V   I+    + E           +   C      DR
Sbjct: 211 -------------KPYKKMKGPEVMAFIEQ-GKRMECPPECPPELYALMSDCWIYKWEDR 256

Query: 159 PTMSDVVSMISNEHLNLCS 177
           P    V   +   + +L S
Sbjct: 257 PDFLTVEQRMRACYYSLAS 275

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.5 bits (208), Expect = 3e-20
 Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 55/214 (25%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------- 63
                L  Q        +A+G+ YL Q    + IHRDL A NIL+               
Sbjct: 119 STASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR 175

Query: 64  ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN 108
                           +M  E      ++  SDV+S+GVL+ EI+S   +          
Sbjct: 176 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--------- 226

Query: 109 LLGHAWDLWKDDRVHELIDPVIT--QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS 166
                   +      EL + +    + E  L+       +   C +E   +RP+ + ++ 
Sbjct: 227 --------YCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL- 277

Query: 167 MISNEHLNLCSLKKLAFVRSKNVKNSSHSNSGTS 200
                 LN    ++  +V +   +  +++    S
Sbjct: 278 ----VSLNRMLEERKTYVNTTLYEKFTYAGIDCS 307

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.6 bits (206), Expect = 3e-20
 Identities = 37/190 (19%), Positives = 66/190 (34%), Gaps = 48/190 (25%)

Query: 11  LDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------- 63
           L     + +     Q    + + + + + YL      + +HRDL A N L++        
Sbjct: 86  LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVS 142

Query: 64  -----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTA 100
                                   + PPE  +   FS KSD+++FGVLM EI S  K   
Sbjct: 143 DFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP- 201

Query: 101 VYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPT 160
                 +    ++       +   L  P +  +++          +   C  E   +RPT
Sbjct: 202 ------YERFTNSETAEHIAQGLRLYRPHLASEKV--------YTIMYSCWHEKADERPT 247

Query: 161 MSDVVSMISN 170
              ++S I +
Sbjct: 248 FKILLSNILD 257

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.0 bits (207), Expect = 3e-20
 Identities = 40/191 (20%), Positives = 67/191 (35%), Gaps = 48/191 (25%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
           LLD      ++ +   V   +   I+  + YL    +   IHRDL A N L+        
Sbjct: 100 LLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKV 156

Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST 99
                                    +  PE      FSIKSDV++FGVL+ EI +   S 
Sbjct: 157 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 216

Query: 100 AVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRP 159
                         +      +V+EL++    + E       +  ++   C Q   +DRP
Sbjct: 217 --------------YPGIDLSQVYELLEKDY-RMERPEGCPEKVYELMRACWQWNPSDRP 261

Query: 160 TMSDVVSMISN 170
           + +++      
Sbjct: 262 SFAEIHQAFET 272

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 7e-20
 Identities = 37/187 (19%), Positives = 62/187 (33%), Gaps = 50/187 (26%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           + + R +  +    ++  ++ G+ YL +      +HRDL A N+LL +            
Sbjct: 98  LQQNRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS 154

Query: 64  --------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
                                +  PE      FS KSDV+SFGVLM E  S  +      
Sbjct: 155 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ------ 208

Query: 104 TGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSD 163
                     +   K   V  +++    +             +  LC    V +RP  + 
Sbjct: 209 --------KPYRGMKGSEVTAMLEKG-ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAA 259

Query: 164 VVSMISN 170
           V   + N
Sbjct: 260 VELRLRN 266

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.5 bits (203), Expect = 2e-19
 Identities = 36/198 (18%), Positives = 65/198 (32%), Gaps = 52/198 (26%)

Query: 5   LVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS- 63
            + +  LD+                ++ GIA G+ YL        +HRDL A NIL++S 
Sbjct: 108 FMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSN 164

Query: 64  ---------------------------------GYMPPEYALRGFFSIKSDVFSFGVLML 90
                                             +  PE      F+  SDV+S+G++M 
Sbjct: 165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 224

Query: 91  EILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLC 150
           E++S  +                +    +  V   I+    +    +       ++ L C
Sbjct: 225 EVMSYGE--------------RPYWDMTNQDVINAIEQDY-RLPPPMDCPSALHQLMLDC 269

Query: 151 VQETVADRPTMSDVVSMI 168
            Q+    RP    +V+ +
Sbjct: 270 WQKDRNHRPKFGQIVNTL 287

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 3e-19
 Identities = 41/178 (23%), Positives = 59/178 (33%), Gaps = 47/178 (26%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           + K    D Q  A  I  +A  L Y H     R+IHRD+K  N+LL S            
Sbjct: 97  LQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 153

Query: 64  ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN 108
                           Y+PPE         K D++S GVL  E L GK          F 
Sbjct: 154 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP--------PFE 205

Query: 109 LLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS 166
              +     +  RV       +T+    L             ++   + RP + +V+ 
Sbjct: 206 ANTYQETYKRISRVEFTFPDFVTEGARDL---------ISRLLKHNPSQRPMLREVLE 254

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 4e-19
 Identities = 33/217 (15%), Positives = 70/217 (32%), Gaps = 49/217 (22%)

Query: 11  LDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------- 63
           L     + K  +  Q        IA+G+ YL      R++HRDL A N+L+ +       
Sbjct: 97  LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKIT 153

Query: 64  ------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKST 99
                                    +M  E  L   ++ +SDV+S+GV + E+++     
Sbjct: 154 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS-- 211

Query: 100 AVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRP 159
                         +D      +  +++    +        +    + + C       RP
Sbjct: 212 ------------KPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVKCWMIDADSRP 258

Query: 160 TMSDVVSMISNEHLNLCSLKKLAFVRSKNVKNSSHSN 196
              +++   S    +      +      ++ + + SN
Sbjct: 259 KFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSN 295

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.7 bits (196), Expect = 1e-18
 Identities = 35/183 (19%), Positives = 64/183 (34%), Gaps = 49/183 (26%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           I+    +      R    +  G++YLH    + I HRD+K  N+LLD             
Sbjct: 94  IEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 150

Query: 64  -------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
                               Y+ PE   R  F +   DV+S G+++  +L+G+       
Sbjct: 151 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-----LP 205

Query: 104 TGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSD 163
               +     +  WK+ + +      I    ++L  L +        + E  + R T+ D
Sbjct: 206 WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL--LHK-------ILVENPSARITIPD 256

Query: 164 VVS 166
           +  
Sbjct: 257 IKK 259

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 1e-18
 Identities = 43/199 (21%), Positives = 65/199 (32%), Gaps = 48/199 (24%)

Query: 3   KKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD 62
           K+  +     A     K  L  +        +A+G+ +L      + IHRDL A NILL 
Sbjct: 112 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLS 168

Query: 63  S-------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLE 91
                                            +M PE      ++I+SDV+SFGVL+ E
Sbjct: 169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 228

Query: 92  ILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCV 151
           I S   S          +        K+       D    +            +  L C 
Sbjct: 229 IFSLGAS----PYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----------MYQTMLDCW 274

Query: 152 QETVADRPTMSDVVSMISN 170
               + RPT S++V  + N
Sbjct: 275 HGEPSQRPTFSELVEHLGN 293

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.9 bits (194), Expect = 3e-18
 Identities = 35/198 (17%), Positives = 64/198 (32%), Gaps = 59/198 (29%)

Query: 5   LVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS- 63
                 +DA  ++ +R L       + +     L YLH     +IIHRDLKA NIL    
Sbjct: 90  FCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLD 146

Query: 64  ----------------------------GYMPPEYAL-----RGFFSIKSDVFSFGVLML 90
                                        +M PE  +        +  K+DV+S G+ ++
Sbjct: 147 GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 206

Query: 91  EILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA--- 147
           E+   +                      +     ++  +   +  +L+   R+       
Sbjct: 207 EMAEIEP------------------PHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDF 248

Query: 148 -LLCVQETVADRPTMSDV 164
              C+++ V  R T S +
Sbjct: 249 LKKCLEKNVDARWTTSQL 266

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.8 bits (193), Expect = 4e-18
 Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 49/200 (24%)

Query: 2   CKKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL 61
            ++    +     + + +  L  +        +A+G+ YL      + IHRDL A N+L+
Sbjct: 112 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV 168

Query: 62  DS-------------------------------GYMPPEYALRGFFSIKSDVFSFGVLML 90
                                             +M PE      ++ +SDV+SFGVL+ 
Sbjct: 169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 228

Query: 91  EILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLC 150
           EI +   S        +  +            H +  P    +E+          +   C
Sbjct: 229 EIFTLGGSP-------YPGVPVEELFKLLKEGHRMDKPSNCTNEL--------YMMMRDC 273

Query: 151 VQETVADRPTMSDVVSMISN 170
                + RPT   +V  +  
Sbjct: 274 WHAVPSQRPTFKQLVEDLDR 293

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.0 bits (189), Expect = 1e-17
 Identities = 31/184 (16%), Positives = 60/184 (32%), Gaps = 51/184 (27%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSR--LRIIHRDLKASNILLDS--------- 63
              +++ LD +   R++  +   L   H+ S     ++HRDLK +N+ LD          
Sbjct: 99  GTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 158

Query: 64  --------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYN 103
                                YM PE   R  ++ KSD++S G L+ E+ +         
Sbjct: 159 GLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP------ 212

Query: 104 TGSFNLLGHAWDLWKDDRVHELIDPVITQD--EISLSMLMRYVKVALLCVQETVADRPTM 161
                        +      EL   +       I         ++    +      RP++
Sbjct: 213 ------------PFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSV 260

Query: 162 SDVV 165
            +++
Sbjct: 261 EEIL 264

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.6 bits (188), Expect = 3e-17
 Identities = 42/180 (23%), Positives = 63/180 (35%), Gaps = 46/180 (25%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------- 63
               K+ L     A +  G  QGL YLH      +IHRD+KA NILL             
Sbjct: 105 LEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGS 161

Query: 64  --------------GYMPPEYAL---RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGS 106
                          +M PE  L    G +  K DV+S G+  +E+   K    ++N  +
Sbjct: 162 ASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK--PPLFNMNA 219

Query: 107 FNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS 166
            + L           + +   P +     S             C+Q+   DRPT   ++ 
Sbjct: 220 MSAL---------YHIAQNESPALQSGHWSEYF----RNFVDSCLQKIPQDRPTSEVLLK 266

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (185), Expect = 3e-17
 Identities = 35/190 (18%), Positives = 54/190 (28%), Gaps = 49/190 (25%)

Query: 11  LDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------- 63
           L       +        +R    +A+G+ YL      R IHRDL A N+LL +       
Sbjct: 97  LLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIG 153

Query: 64  -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS 98
                                     +  PE      FS  SD + FGV + E+ +  + 
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ- 212

Query: 99  TAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADR 158
                          W      ++   ID    +             V + C      DR
Sbjct: 213 -------------EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259

Query: 159 PTMSDVVSMI 168
           PT   +   +
Sbjct: 260 PTFVALRDFL 269

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.6 bits (183), Expect = 1e-16
 Identities = 30/183 (16%), Positives = 61/183 (33%), Gaps = 54/183 (29%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------- 63
           ++  +  +D    A +     Q L +LH     ++IHRD+K+ NILL             
Sbjct: 106 DVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGF 162

Query: 64  ------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTG 105
                              +M PE   R  +  K D++S G++ +E++ G+         
Sbjct: 163 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP-------- 214

Query: 106 SFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA----LLCVQETVADRPTM 161
                      + ++     +  + T     L    +   +       C+   V  R + 
Sbjct: 215 ----------PYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSA 264

Query: 162 SDV 164
            ++
Sbjct: 265 KEL 267

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 2e-16
 Identities = 35/191 (18%), Positives = 65/191 (34%), Gaps = 53/191 (27%)

Query: 14  ANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------- 63
           AN             ++   IA G+ YL+     + +HRDL A N ++            
Sbjct: 122 ANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG 178

Query: 64  ---------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVY 102
                                 +M PE    G F+  SDV+SFGV++ EI +  +     
Sbjct: 179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--- 235

Query: 103 NTGSFNLLGHAWDLWKDDRVHELIDPVITQD--EISLSMLMRYVKVALLCVQETVADRPT 160
                         ++     +++  V+     +   +      ++  +C Q     RP+
Sbjct: 236 --------------YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPS 281

Query: 161 MSDVVSMISNE 171
             +++S I  E
Sbjct: 282 FLEIISSIKEE 292

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.9 bits (178), Expect = 3e-16
 Identities = 34/192 (17%), Positives = 63/192 (32%), Gaps = 52/192 (27%)

Query: 11  LDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------- 63
           L +    +K  LD          ++  L YL      R +HRD+ A N+L+ S       
Sbjct: 94  LRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLG 150

Query: 64  -----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTA 100
                                   +M PE      F+  SDV+ FGV M EIL       
Sbjct: 151 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV--- 207

Query: 101 VYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISL--SMLMRYVKVALLCVQETVADR 158
                           ++  + +++I  +   + + +  +       +   C     + R
Sbjct: 208 --------------KPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 253

Query: 159 PTMSDVVSMISN 170
           P  +++ + +S 
Sbjct: 254 PRFTELKAQLST 265

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.7 bits (172), Expect = 3e-15
 Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 31/119 (26%)

Query: 6   VYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-- 63
           V   L    +   +  +  +    ++  + +GL +LH     R++HRDLK  NIL+ S  
Sbjct: 97  VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSG 153

Query: 64  --------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                      Y  PE  L+  ++   D++S G +  E+   K
Sbjct: 154 QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 212

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 70.1 bits (171), Expect = 6e-15
 Identities = 22/116 (18%), Positives = 37/116 (31%), Gaps = 33/116 (28%)

Query: 11  LDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------- 63
           L     D+   +        +  + +GL ++H       +H DLK  NI+  +       
Sbjct: 110 LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELK 166

Query: 64  -----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                   +  PE A        +D++S GVL   +LSG 
Sbjct: 167 LIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 222

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 69.1 bits (168), Expect = 1e-14
 Identities = 25/199 (12%), Positives = 49/199 (24%), Gaps = 51/199 (25%)

Query: 11  LDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------- 63
           L+       R    +    + + +   + Y+H       IHRD+K  N L+         
Sbjct: 89  LEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLV 145

Query: 64  --------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLE 91
                                            Y      L    S + D+ S G +++ 
Sbjct: 146 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY 205

Query: 92  ILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCV 151
              G          +           K     E++      +    +  + +      C 
Sbjct: 206 FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSE---FATYLNF------CR 256

Query: 152 QETVADRPTMSDVVSMISN 170
                D+P  S +  +  N
Sbjct: 257 SLRFDDKPDYSYLRQLFRN 275

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.9 bits (160), Expect = 2e-13
 Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 29/101 (28%)

Query: 23  DWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------- 63
              V       +   L YLH      II+RDLK  NILLD                    
Sbjct: 102 PNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 158

Query: 64  -------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK 97
                   Y+ PE      ++   D +SFG+L+ E+L+G  
Sbjct: 159 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT 199

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 64.8 bits (157), Expect = 3e-13
 Identities = 25/196 (12%), Positives = 49/196 (25%), Gaps = 53/196 (27%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
               R    +  A   + +   +  +H+     +++RD+K  N L+              
Sbjct: 92  DLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVV 148

Query: 64  -----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS 94
                                         YM     L    S + D+ + G + +  L 
Sbjct: 149 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR 208

Query: 95  GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQET 154
           G           +  L  A +  K +R+ E         E+       + K         
Sbjct: 209 GSL--------PWQGLKAATNKQKYERIGEKKQS-TPLRELCAGFPEEFYKYMHYARNLA 259

Query: 155 VADRPTMSDVVSMISN 170
               P    +  + S 
Sbjct: 260 FDATPDYDYLQGLFSK 275

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.8 bits (157), Expect = 4e-13
 Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 29/107 (27%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           + +               I     YLH    L +I+RDLK  N+L+D             
Sbjct: 132 LRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

Query: 64  --------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                           + PE  L   ++   D ++ GVL+ E+ +G 
Sbjct: 189 KRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 64.3 bits (156), Expect = 6e-13
 Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 33/111 (29%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
             +   +        +    +GL ++H      I+H D+K  NI+ ++            
Sbjct: 118 AAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFG 174

Query: 64  ------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                              +  PE   R      +D+++ GVL   +LSG 
Sbjct: 175 LATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 225

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 1e-12
 Identities = 26/112 (23%), Positives = 37/112 (33%), Gaps = 34/112 (30%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           I K    D          I   L YLH      IIHRDLK  NILL+             
Sbjct: 99  IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 155

Query: 64  -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                               Y+ PE          SD+++ G ++ ++++G 
Sbjct: 156 KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 207

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 62.8 bits (152), Expect = 1e-12
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 37/115 (32%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           + +K  L  +   +I+  + + +  LH   +L I+HRDLK  NILLD             
Sbjct: 101 LTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 157

Query: 64  ----------------GYMPPEYAL------RGFFSIKSDVFSFGVLMLEILSGK 96
                            Y+ PE            +  + D++S GV+M  +L+G 
Sbjct: 158 CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 212

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 2e-12
 Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 47/188 (25%)

Query: 10  LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------ 63
           L         +    +  + I++ I + + YLH    + I HRD+K  N+L  S      
Sbjct: 96  LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAI 152

Query: 64  -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKS 98
                                     Y+ PE      +    D++S GV+M  +L G   
Sbjct: 153 LKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY-- 210

Query: 99  TAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEIS--LSMLMRYVKVALLCVQETVA 156
                  S + L  +  +    R+ +   P     E+S  + ML+R        ++    
Sbjct: 211 ---PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR------NLLKTEPT 261

Query: 157 DRPTMSDV 164
            R T+++ 
Sbjct: 262 QRMTITEF 269

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 60.9 bits (147), Expect = 1e-11
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 31/110 (28%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------- 63
           ++ +  +            I  GL ++H      +++RDLK +NILLD            
Sbjct: 97  HLSQHGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGL 153

Query: 64  ----------------GYMPPEYALRGF-FSIKSDVFSFGVLMLEILSGK 96
                           GYM PE   +G  +   +D FS G ++ ++L G 
Sbjct: 154 ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 203

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 60.1 bits (145), Expect = 1e-11
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 35/113 (30%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           +  +  +  +    +I    Q L + H   +  IIHRD+K +NI++ +            
Sbjct: 102 VHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIA 158

Query: 64  --------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                Y+ PE A       +SDV+S G ++ E+L+G+
Sbjct: 159 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 211

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 2e-11
 Identities = 30/110 (27%), Positives = 40/110 (36%), Gaps = 32/110 (29%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           I      D          I  GL +LH      I++RDLK  NILLD             
Sbjct: 94  IQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC 150

Query: 64  -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                             Y+ PE  L   ++   D +SFGVL+ E+L G+
Sbjct: 151 KENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 200

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 2e-11
 Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 32/121 (26%)

Query: 5   LVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS- 63
                      I ++  L  ++       + + + + H      ++HRD+K  NIL+D  
Sbjct: 90  RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLN 146

Query: 64  ---------------------------GYMPPEYAL-RGFFSIKSDVFSFGVLMLEILSG 95
                                       Y PPE+     +    + V+S G+L+ +++ G
Sbjct: 147 RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206

Query: 96  K 96
            
Sbjct: 207 D 207

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 2e-11
 Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 33/110 (30%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------- 63
                L+ +     +  + + L +LH      I H D++  NI+  +             
Sbjct: 94  TSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQ 150

Query: 64  -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                             Y  PE       S  +D++S G L+  +LSG 
Sbjct: 151 ARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI 200

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 9e-11
 Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 36/118 (30%)

Query: 12  DAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------- 63
           D   + K + L        +  I +GL Y+H      ++HRDLK SN+LL++        
Sbjct: 96  DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 152

Query: 64  ------------------------GYMPPEYALRGFFSIKS-DVFSFGVLMLEILSGK 96
                                    Y  PE  L      KS D++S G ++ E+LS +
Sbjct: 153 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 210

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 2e-10
 Identities = 24/111 (21%), Positives = 38/111 (34%), Gaps = 33/111 (29%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
              K+ L        +  + + L Y+H      I HRD+K  N+LLD             
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGS 169

Query: 64  -----------------GYMPPEYALRGF-FSIKSDVFSFGVLMLEILSGK 96
                             Y  PE       ++   DV+S G ++ E+L G+
Sbjct: 170 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 2e-10
 Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 33/122 (27%)

Query: 5   LVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS- 63
            ++  L    +      +   +    +  + QGL + H +   R++HRDLK  N+L+++ 
Sbjct: 82  FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 138

Query: 64  ----------------------------GYMPPE-YALRGFFSIKSDVFSFGVLMLEILS 94
                                        Y  PE      ++S   D++S G +  E+++
Sbjct: 139 GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198

Query: 95  GK 96
            +
Sbjct: 199 RR 200

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (131), Expect = 1e-09
 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 33/110 (30%)

Query: 17  DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------- 63
           D   +L        +    QGL YLHQ+    I+HRDLK +N+LLD              
Sbjct: 92  DNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 148

Query: 64  ----------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGK 96
                            Y  PE       + +  D+++ G ++ E+L   
Sbjct: 149 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 198

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 1e-09
 Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 30/112 (26%)

Query: 12  DAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------- 63
           D   + K   L       ++  + +GL Y+H      IIHRDLK  N+ ++         
Sbjct: 108 DLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILD 164

Query: 64  ------------------GYMPPEYAL-RGFFSIKSDVFSFGVLMLEILSGK 96
                              Y  PE  L    ++   D++S G +M E+++GK
Sbjct: 165 FGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 216

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (130), Expect = 1e-09
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 32/110 (29%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           + ++R+   +         A+ +  L       +++RD+K  N++LD             
Sbjct: 96  LSRERVFTEERARFYG---AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152

Query: 64  -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                             Y+ PE      +    D +  GV+M E++ G+
Sbjct: 153 KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.3 bits (129), Expect = 2e-09
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 34/118 (28%)

Query: 11  LDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------- 63
           L      + R +      +I + +  GL Y+H+  R  IIH D+K  N+L++        
Sbjct: 111 LALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENL 168

Query: 64  -------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                                     Y  PE  L   +   +D++S   L+ E+++G 
Sbjct: 169 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 226

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (126), Expect = 4e-09
 Identities = 18/126 (14%), Positives = 33/126 (26%), Gaps = 30/126 (23%)

Query: 2   CKKLVYSKLLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL 61
              LV+                      +   + Q L  L       ++HRDLK  N+L+
Sbjct: 75  KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 134

Query: 62  DS------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLE 91
           +                                  P        +S   D++S G +  E
Sbjct: 135 NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE 194

Query: 92  ILSGKK 97
           + +  +
Sbjct: 195 LANAGR 200

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.7 bits (126), Expect = 5e-09
 Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 34/112 (30%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
           I +K     +  +R+I  +   + YLH      I+HRDLK  N+L  S            
Sbjct: 98  IVEKGFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDF 154

Query: 64  -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                              GY+ PE   +  +S   D +S GV+   +L G 
Sbjct: 155 GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 206

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 4e-08
 Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 35/111 (31%)

Query: 18  KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------- 63
           +K  L  +     ++ I  G+   +    L+I H DLK  NI+L                
Sbjct: 106 EKESLTEEEATEFLKQILNGV---YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 162

Query: 64  ------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                              ++ PE        +++D++S GV+   +LSG 
Sbjct: 163 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 213

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 49.1 bits (116), Expect = 8e-08
 Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 33/111 (29%)

Query: 16  IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------ 63
              +  L+       +  +  G+ Y H     R++HRDLK  N+L++             
Sbjct: 91  DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLA 147

Query: 64  -----------------GYMPPEYAL-RGFFSIKSDVFSFGVLMLEILSGK 96
                             Y  P+  +    +S   D++S G +  E+++G 
Sbjct: 148 RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 1e-07
 Identities = 33/199 (16%), Positives = 63/199 (31%), Gaps = 52/199 (26%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------- 63
             +           R+++ +  GL Y+H+    +I+HRD+KA+N+L+             
Sbjct: 107 LSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 163

Query: 64  ----------------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGK---- 96
                                  Y PPE  L    +    D++  G +M E+ +      
Sbjct: 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 223

Query: 97  -----KSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALL-- 149
                   A+ +    ++    W    +  ++E ++ V  Q       L  YV+      
Sbjct: 224 GNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALD 283

Query: 150 ----CVQETVADRPTMSDV 164
                +    A R    D 
Sbjct: 284 LIDKLLVLDPAQRIDSDDA 302

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 3e-07
 Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 30/112 (26%)

Query: 12  DAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------- 63
           D  NI K + L       +I  I +GL Y+H      IIHRDLK SN+ ++         
Sbjct: 108 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILD 164

Query: 64  ------------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGK 96
                              Y  PE  L    ++   D++S G +M E+L+G+
Sbjct: 165 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 32/100 (32%)

Query: 29  RIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------------- 63
            +   + + +L L    +L II+RD+K  NILLDS                         
Sbjct: 130 EVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 189

Query: 64  -----GYMPPEYALRGF--FSIKSDVFSFGVLMLEILSGK 96
                 YM P+    G        D +S GVLM E+L+G 
Sbjct: 190 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 229

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (102), Expect = 7e-06
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 31/106 (29%)

Query: 19  KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------- 63
           +  LD +  + ++  +  G+ +LH      IIHRDLK SNI++ S               
Sbjct: 113 QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169

Query: 64  -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGK 96
                         Y  PE  L   +    D++S G +M E++  K
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 43.3 bits (101), Expect = 7e-06
 Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 34/108 (31%)

Query: 19  KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------- 63
           + L D+ +R   +  I + L Y H    + I+HRD+K  N+++D                
Sbjct: 124 QTLTDYDIR-FYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 179

Query: 64  --------------GYMPPEYALR-GFFSIKSDVFSFGVLMLEILSGK 96
                          +  PE  +    +    D++S G ++  ++  K
Sbjct: 180 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 227

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 7/48 (14%), Positives = 20/48 (41%), Gaps = 3/48 (6%)

Query: 15  NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD 62
           +  +   +  +    +++ I + +   +      I+H DL   N+L+ 
Sbjct: 93  DAKELYRVRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS 137

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	216
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.98
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.98
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.98
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.98
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.98
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.98
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.98
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.98
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.97
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.97
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.97
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.97
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.97
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.97
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.97
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.97
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.97
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.97
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.97
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.97
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.97
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.97
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.97
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.97
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.97
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.97
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.97
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.96
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.96
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.96
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.96
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.96
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.96
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.96
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.96
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.96
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.96
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.96
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.96
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.96
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.95
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.95
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.95
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.95
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.94
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.94
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.93
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.1

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-36  Score=238.64  Aligned_cols=160  Identities=24%  Similarity=0.337  Sum_probs=124.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .+|||||    +|.++....+..+++.++..++.|++.||+|||+++   |+||||||+|||++.+              
T Consensus        78 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~---ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~  154 (276)
T d1uwha_          78 LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVK  154 (276)
T ss_dssp             CEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTSSEEECCCCCSCC-
T ss_pred             EEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCC---EeccccCHHHEEEcCCCCEEEccccceeec
Confidence            4799999    777776566677999999999999999999999998   9999999999999762              


Q ss_pred             -----------------CCChhhhhcC---CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           65 -----------------YMPPEYALRG---FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        65 -----------------y~aPE~~~~~---~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                       |+|||++.+.   .++.++|||||||++|||++|+.||........     .......+    
T Consensus       155 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~-----~~~~~~~~----  225 (276)
T d1uwha_         155 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-----IIFMVGRG----  225 (276)
T ss_dssp             -----------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-----HHHHHHHT----
T ss_pred             cccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH-----HHHHHhcC----
Confidence                             9999998743   589999999999999999999999864332211     11111111    


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccccc
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNLC  176 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~~  176 (216)
                      ...+...  ..+..+++.+.+++.+||+.+|++|||+.||++.|+.+.+.+|
T Consensus       226 ~~~p~~~--~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~P  275 (276)
T d1uwha_         226 YLSPDLS--KVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP  275 (276)
T ss_dssp             SCCCCGG--GSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             CCCCcch--hccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcCC
Confidence            0111111  1112255679999999999999999999999999998876655

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.1e-35  Score=234.51  Aligned_cols=153  Identities=24%  Similarity=0.369  Sum_probs=122.5

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .|+||||    +|+++.....+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.+              
T Consensus       102 ~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~  178 (299)
T d1jpaa_         102 VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFL  178 (299)
T ss_dssp             CEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             EEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCC---CccCccccceEEECCCCcEEECCcccceEc
Confidence            5899999    777776666677999999999999999999999998   9999999999999762              


Q ss_pred             --------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccc
Q 040682           65 --------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVH  123 (216)
Q Consensus        65 --------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (216)
                                          |+|||.+.+..++.++|||||||++|||++ |..||......  .....    ...+   
T Consensus       179 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--~~~~~----i~~~---  249 (299)
T d1jpaa_         179 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--DVINA----IEQD---  249 (299)
T ss_dssp             -----------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHH----HHTT---
T ss_pred             cCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH--HHHHH----HHcC---
Confidence                                999999999999999999999999999998 88898543221  11111    1111   


Q ss_pred             cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          124 ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                        ..+.     .+.+++..+.+++.+||+.+|++|||+.||++.|+++...
T Consensus       250 --~~~~-----~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         250 --YRLP-----PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             --CCCC-----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             --CCCC-----CCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence              0111     1112556789999999999999999999999999886444

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-35  Score=229.84  Aligned_cols=152  Identities=25%  Similarity=0.328  Sum_probs=119.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    +|.++.......+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        75 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~  151 (263)
T d1sm2a_          75 ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV  151 (263)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCTTCSGGGEEECGGGCEEECSCC-----
T ss_pred             eEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccc---eeecccchhheeecCCCCeEecccchheec
Confidence            5899999    777776666678999999999999999999999998   999999999999975               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||++.+..++.++|||||||++|||+++..|+....... .....    ....     ..+
T Consensus       152 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~-~~~~~----i~~~-----~~~  221 (263)
T d1sm2a_         152 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-EVVED----ISTG-----FRL  221 (263)
T ss_dssp             -------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHH-HHHHH----HHHT-----CCC
T ss_pred             cCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHH-HHHHH----HHhc-----CCC
Confidence                           2999999999999999999999999999999655543221111 11111    1111     011


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      ..     +..++.++.+++.+||+.+|++|||+.||++.|+++.
T Consensus       222 ~~-----p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~  260 (263)
T d1sm2a_         222 YK-----PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA  260 (263)
T ss_dssp             CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CC-----ccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence            11     1114567899999999999999999999999999763

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-35  Score=230.37  Aligned_cols=153  Identities=24%  Similarity=0.301  Sum_probs=122.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++....+..+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        83 ~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~  159 (285)
T d1u59a_          83 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKAL  159 (285)
T ss_dssp             EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCcCchhheeeccCCceeeccchhhhcc
Confidence            4899999    777776666678999999999999999999999998   999999999999975               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||++.+..++.++|||||||++|||++ |+.||.......  ..    .....+.    
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~--~~----~~i~~~~----  229 (285)
T d1u59a_         160 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VM----AFIEQGK----  229 (285)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HH----HHHHTTC----
T ss_pred             cccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH--HH----HHHHcCC----
Confidence                             1999999999999999999999999999998 899986543221  11    1111111    


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                       .+..     +..++.++.+++.+||+.+|++|||+.+|++.|+.....
T Consensus       230 -~~~~-----p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         230 -RMEC-----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             -CCCC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -CCCC-----CCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence             1111     112556789999999999999999999999999875433

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-34  Score=228.35  Aligned_cols=154  Identities=25%  Similarity=0.356  Sum_probs=120.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    ++.+........+++.++..++.|++.||+|||+++   |+||||||+|||++.+              
T Consensus        84 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~  160 (283)
T d1mqba_          84 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVL  160 (283)
T ss_dssp             EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             eEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccc---cccCccccceEEECCCCeEEEcccchhhcc
Confidence            5889999    555555566678999999999999999999999998   9999999999999862              


Q ss_pred             ------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 ------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 ------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                        |+|||++.+..++.++|||||||++|||++|..|+....... ..    ......+     .
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~-~~----~~~i~~~-----~  230 (283)
T d1mqba_         161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EV----MKAINDG-----F  230 (283)
T ss_dssp             -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HH----HHHHHTT-----C
T ss_pred             cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHH-HH----HHHHhcc-----C
Confidence                              999999999999999999999999999999766654322111 11    1111111     1


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                      .+..     +.+++..+.+++.+||+.+|++||++.||++.|+++...
T Consensus       231 ~~~~-----~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         231 RLPT-----PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             CCCC-----CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             CCCC-----chhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            1111     112456789999999999999999999999999886543

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-34  Score=231.47  Aligned_cols=149  Identities=25%  Similarity=0.402  Sum_probs=116.4

Q ss_pred             eeeeecc----cccccccCCC----------------------CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCC
Q 040682            3 KKLVYSK----LLDAANIDKK----------------------RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKA   56 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~----------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~   56 (216)
                      .||||||    +|.++...++                      ..+++.+++.++.|++.||+|||+++   |+||||||
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~---IiHRDlKp  192 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAA  192 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSG
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCch
Confidence            4899999    6666633322                      35899999999999999999999998   99999999


Q ss_pred             CceeecCC-------------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCC
Q 040682           57 SNILLDSG-------------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNT  104 (216)
Q Consensus        57 ~nil~~~~-------------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~  104 (216)
                      +|||++.+                               |+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus       193 ~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~  272 (325)
T d1rjba_         193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV  272 (325)
T ss_dssp             GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             hccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH
Confidence            99999752                               999999999999999999999999999997 8999865433


Q ss_pred             CccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHc
Q 040682          105 GSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMIS  169 (216)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~  169 (216)
                      ... .    ......+     ..+..     +..++.++.+++.+||+.+|++|||+.||+++|.
T Consensus       273 ~~~-~----~~~~~~~-----~~~~~-----p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         273 DAN-F----YKLIQNG-----FKMDQ-----PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             SHH-H----HHHHHTT-----CCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHH-H----HHHHhcC-----CCCCC-----CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            221 1    1111111     11111     1124567999999999999999999999999986

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-34  Score=227.53  Aligned_cols=151  Identities=26%  Similarity=0.335  Sum_probs=116.5

Q ss_pred             eeeeecc----cccccc-cCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAAN-IDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|.++. ......+++.+++.++.|++.||+|||+++   |+||||||+|||++.              
T Consensus        82 ~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~---ivHrDiKp~NIll~~~~~~Kl~DFGla~~  158 (272)
T d1qpca_          82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL  158 (272)
T ss_dssp             CEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             eEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccchhheeeecccceeeccccceEE
Confidence            4899999    666652 333346999999999999999999999998   999999999999986              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||++.+..++.++|||||||++|||++|..|+....... ...    ......     ..
T Consensus       159 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~-~~~----~~i~~~-----~~  228 (272)
T d1qpca_         159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVI----QNLERG-----YR  228 (272)
T ss_dssp             CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHH----HHHHTT-----CC
T ss_pred             ccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH-HHH----HHHHhc-----CC
Confidence                            2999999999999999999999999999999766654322111 111    111111     11


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      +..+     ..++.++.+++.+||+.+|++|||+.||++.|++.
T Consensus       229 ~~~p-----~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~  267 (272)
T d1qpca_         229 MVRP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF  267 (272)
T ss_dssp             CCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCc-----ccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhh
Confidence            1111     12456789999999999999999999999999864

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-34  Score=227.86  Aligned_cols=149  Identities=27%  Similarity=0.337  Sum_probs=118.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++. ...+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        82 ~~lvmE~~~~g~L~~~l-~~~~~l~~~~~~~i~~qi~~gl~ylH~~~---iiHrDlKp~Nill~~~~~~kl~DFGla~~~  157 (277)
T d1xbba_          82 WMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL  157 (277)
T ss_dssp             EEEEEECCTTEEHHHHH-HHCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCcHHHHH-hhccCCCHHHHHHHHHHHHHHHhhHHhCC---cccCCCcchhhcccccCcccccchhhhhhc
Confidence            4799999    666663 34456999999999999999999999998   999999999999975               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||.+.+..++.++|||||||++|||++ |+.||.......  .    ......+.    
T Consensus       158 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~--~----~~~i~~~~----  227 (277)
T d1xbba_         158 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--V----TAMLEKGE----  227 (277)
T ss_dssp             CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--H----HHHHHTTC----
T ss_pred             cccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH--H----HHHHHcCC----
Confidence                             1999999999999999999999999999998 899986433211  1    11111110    


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                       .+..     +..++.++.+++.+||+.||++|||+.+|++.|+..
T Consensus       228 -~~~~-----p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         228 -RMGC-----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             -CCCC-----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             -CCCC-----CcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence             1111     112556789999999999999999999999988764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.4e-34  Score=226.51  Aligned_cols=152  Identities=24%  Similarity=0.267  Sum_probs=118.7

Q ss_pred             eeeeecc----ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      .|+||||    +|.++ .......+++..++.++.|++.||+|||+++   |+||||||+|||++.+             
T Consensus        88 ~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFG~a~~  164 (287)
T d1opja_          88 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL  164 (287)
T ss_dssp             CEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCCTTT
T ss_pred             eEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC---cccCccccCeEEECCCCcEEEccccceee
Confidence            5899999    55555 3345567999999999999999999999998   9999999999999751             


Q ss_pred             -----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           65 -----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        65 -----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                       |+|||++.+..++.++|||||||++|||++|..|+.......     ........+     ..
T Consensus       165 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~-----~~~~~i~~~-----~~  234 (287)
T d1opja_         165 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKD-----YR  234 (287)
T ss_dssp             CCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHTT-----CC
T ss_pred             cCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHH-----HHHHHHhcC-----CC
Confidence                             999999999999999999999999999999877764322211     111111111     11


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      +..     +..++.++.+++.+||+.||++|||+.||++.|+.+.
T Consensus       235 ~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         235 MER-----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCC-----CccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            111     1124567899999999999999999999999998763

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-34  Score=226.67  Aligned_cols=147  Identities=25%  Similarity=0.343  Sum_probs=114.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++.....+.+++.++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        84 ~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~---ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~  160 (288)
T d2jfla1          84 LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKN  160 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEEeecChhheeECCCCCEEEEechhhhcc
Confidence            5899999    666665555667999999999999999999999999   999999999999975               


Q ss_pred             --------------CCCChhhhh-----cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 --------------GYMPPEYAL-----RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 --------------~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                    .|+|||++.     +..++.++|||||||++|||++|+.||........  ...   ..... .  
T Consensus       161 ~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~--~~~---i~~~~-~--  232 (288)
T d2jfla1         161 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV--LLK---IAKSE-P--  232 (288)
T ss_dssp             HHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--HHH---HHHSC-C--
T ss_pred             CCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHH--HHH---HHcCC-C--
Confidence                          299999984     44688999999999999999999999865432221  111   11110 0  


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                         +.+   ..+...+.++.+++.+||+.||++|||+.|+++
T Consensus       233 ---~~~---~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         233 ---PTL---AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             ---CCC---SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---CCC---CccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence               111   111125567899999999999999999999875

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-33  Score=219.78  Aligned_cols=146  Identities=22%  Similarity=0.283  Sum_probs=113.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .||||||    +|.++. ...+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.+              
T Consensus        78 ~~ivmEy~~gg~L~~~l-~~~~~l~e~~~~~i~~qi~~al~ylH~~~---IiHrDiKp~NILl~~~~~~KL~DFG~a~~~  153 (271)
T d1nvra_          78 QYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVF  153 (271)
T ss_dssp             EEEEEECCTTEEGGGGS-BTTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eEEEEeccCCCcHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHcC---CccCcccHHHEEECCCCCEEEccchhheee
Confidence            5899999    666663 34557999999999999999999999999   9999999999999752              


Q ss_pred             -----------------CCChhhhhcCCC-CcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           65 -----------------YMPPEYALRGFF-SIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        65 -----------------y~aPE~~~~~~~-~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       |+|||++.+..+ +.++||||+||++|||++|+.||.............     .....    
T Consensus       154 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~-----~~~~~----  224 (271)
T d1nvra_         154 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT----  224 (271)
T ss_dssp             EETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHH-----HTTCT----
T ss_pred             ccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHH-----hcCCC----
Confidence                             999999998876 578999999999999999999997544332211111     00000    


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                          ..... ...+.++.+++.+||+.||++|||+.|+++
T Consensus       225 ----~~~~~-~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         225 ----YLNPW-KKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             ----TSTTG-GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ----CCCcc-ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                00011 114567889999999999999999998864

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-34  Score=223.34  Aligned_cols=143  Identities=25%  Similarity=0.315  Sum_probs=113.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .|+||||    +|.++. ...+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.+              
T Consensus        81 ~~ivmEy~~~g~L~~~l-~~~~~l~e~~~~~i~~qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~~kl~DFG~a~~~  156 (263)
T d2j4za1          81 VYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA  156 (263)
T ss_dssp             EEEEEECCTTCBHHHHH-HHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCSCSCC
T ss_pred             EEEEEeecCCCcHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeeeeccccceecCCCCEeecccceeeec
Confidence            5899999    555553 33456999999999999999999999999   9999999999999762              


Q ss_pred             -------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccccc
Q 040682           65 -------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVIT  131 (216)
Q Consensus        65 -------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (216)
                                   |+|||++.+..++.++|||||||++|||++|+.||.......  .    ........      +..+
T Consensus       157 ~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~--~----~~~i~~~~------~~~p  224 (263)
T d2j4za1         157 PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE--T----YKRISRVE------FTFP  224 (263)
T ss_dssp             CCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--H----HHHHHTTC------CCCC
T ss_pred             CCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHH--H----HHHHHcCC------CCCC
Confidence                         999999999999999999999999999999999986432111  1    11111110      1111


Q ss_pred             cchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          132 QDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                           ...+.++.+++.+||+.||++|||+.|+++
T Consensus       225 -----~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         225 -----DFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -----ccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence                 114567899999999999999999999975

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2e-33  Score=223.93  Aligned_cols=151  Identities=26%  Similarity=0.320  Sum_probs=115.2

Q ss_pred             eeeeecc----cccccccC---------------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANID---------------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~---------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .++||||    +|.++...               .+..+++.+++.++.|++.||+|||+++   |+||||||+|||++.
T Consensus        93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---ivHrDlKp~NILl~~  169 (299)
T d1ywna1          93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSE  169 (299)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECG
T ss_pred             EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC---CcCCcCCccceeECC
Confidence            4789999    66666322               2345899999999999999999999998   999999999999975


Q ss_pred             -------------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCC-CCCcCCCCccchhh
Q 040682           64 -------------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK-STAVYNTGSFNLLG  111 (216)
Q Consensus        64 -------------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~-~~~~~~~~~~~~~~  111 (216)
                                                     .|+|||++.+..++.++|||||||++|||++|.. ||....... .+..
T Consensus       170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~-~~~~  248 (299)
T d1ywna1         170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCR  248 (299)
T ss_dssp             GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-HHHH
T ss_pred             CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHH-HHHH
Confidence                                           1999999999999999999999999999999754 554332211 1111


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .    ...+     ..+..+     ..++.++.+++.+||+.||++|||+.||+++|+++
T Consensus       249 ~----~~~~-----~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~i  294 (299)
T d1ywna1         249 R----LKEG-----TRMRAP-----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  294 (299)
T ss_dssp             H----HHHT-----CCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             H----HhcC-----CCCCCC-----ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            1    1111     011111     11455789999999999999999999999999875

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.3e-33  Score=221.83  Aligned_cols=147  Identities=22%  Similarity=0.362  Sum_probs=111.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++.. ....+++.+++.++.|++.||+|||+++ .+|+||||||+|||++.               
T Consensus        87 ~~ivmE~~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~gl~yLH~~~-~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~  164 (270)
T d1t4ha_          87 IVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  164 (270)
T ss_dssp             EEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EEEEEeCCCCCcHHHHHh-ccccccHHHHHHHHHHHHHHHHHHHHCC-CCEEeCCcChhhceeeCCCCCEEEeecCccee
Confidence            4899999    6666633 3356999999999999999999999975 56999999999999963               


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                   .|+|||++.+ .++.++|||||||++|||++|+.||........     ........     ..+  
T Consensus       165 ~~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~-----~~~~i~~~-----~~~--  231 (270)
T d1t4ha_         165 KRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-----IYRRVTSG-----VKP--  231 (270)
T ss_dssp             CCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-----HHHHHTTT-----CCC--
T ss_pred             ccCCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH-----HHHHHHcC-----CCC--
Confidence                         2999998865 599999999999999999999999864322111     11111111     001  


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                        ...+...++++.+++.+||+.||++|||+.|+++
T Consensus       232 --~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         232 --ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             --GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --cccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence              1111114456889999999999999999999975

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=7e-34  Score=225.80  Aligned_cols=145  Identities=22%  Similarity=0.341  Sum_probs=113.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .||||||    +|.++.  .++.+++.+++.++.|++.||+|||+++   |+||||||+|||++.+              
T Consensus        92 ~~ivmEy~~gg~L~~~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~vkl~DFG~a~~~  166 (293)
T d1yhwa1          92 LWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI  166 (293)
T ss_dssp             EEEEEECCTTCBHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCcHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCcHHHeEECCCCcEeeccchhheee
Confidence            5899999    666553  2356999999999999999999999999   9999999999999752              


Q ss_pred             ---------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           65 ---------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        65 ---------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                     |+|||++.+..++.++||||+||++|+|++|..||.......     .........      .+.
T Consensus       167 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-----~~~~~~~~~------~~~  235 (293)
T d1yhwa1         167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-----ALYLIATNG------TPE  235 (293)
T ss_dssp             CSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHHC------SCC
T ss_pred             ccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH-----HHHHHHhCC------CCC
Confidence                           999999999999999999999999999999999986433211     111111110      011


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      .   ..+...+..+.+++.+||+.||++|||+.|+++
T Consensus       236 ~---~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         236 L---QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             C---SSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             C---CCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1   111124567899999999999999999999875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.9e-33  Score=219.64  Aligned_cols=149  Identities=25%  Similarity=0.354  Sum_probs=119.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    ++..+.......+++..+..++.|+++||+|||+++   |+||||||+||+++.+              
T Consensus        74 ~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~---iiH~dlk~~Nill~~~~~~kl~DfG~a~~~  150 (258)
T d1k2pa_          74 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYV  150 (258)
T ss_dssp             EEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---BCCSCCSGGGEEECTTCCEEECCCSSCCBC
T ss_pred             eEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcC---cccccccceeEEEcCCCcEEECcchhheec
Confidence            5899999    566666666778999999999999999999999998   9999999999999862              


Q ss_pred             ----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           65 ----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        65 ----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      |+|||.+.+..++.++|||||||++|||++ |+.||......+  ....    ....     ..
T Consensus       151 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~--~~~~----i~~~-----~~  219 (258)
T d1k2pa_         151 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEH----IAQG-----LR  219 (258)
T ss_dssp             SSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHH----HHTT-----CC
T ss_pred             cCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH--HHHH----HHhC-----CC
Confidence                            899999999999999999999999999998 788886443221  1111    1111     01


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ...     +..+++++.+++.+||+.+|++|||+.+|++.|.+
T Consensus       220 ~~~-----p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         220 LYR-----PHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             CCC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             CCC-----cccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            111     11145678999999999999999999999999875

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.5e-33  Score=223.14  Aligned_cols=155  Identities=23%  Similarity=0.328  Sum_probs=120.0

Q ss_pred             eeeeecc----ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .|+||||    +|..+ .....+.+++.+++.++.||+.||+|||+++   |+||||||+|||++.              
T Consensus        86 ~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~---ivH~DlKp~NIll~~~~~~kl~DfGla~~  162 (285)
T d1fmka3          86 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL  162 (285)
T ss_dssp             CEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred             eEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh---eecccccceEEEECCCCcEEEcccchhhh
Confidence            4799999    55555 3334456999999999999999999999998   999999999999975              


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||.+.+..++.++|||||||++|||++|..|+....... .....    ...+     ..
T Consensus       163 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~-~~~~~----i~~~-----~~  232 (285)
T d1fmka3         163 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-EVLDQ----VERG-----YR  232 (285)
T ss_dssp             -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHHH----HHTT-----CC
T ss_pred             ccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHH-HHHHH----HHhc-----CC
Confidence                            1999999999999999999999999999999777654322211 11111    1111     01


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLNL  175 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~~  175 (216)
                      +..     +..+++++.+++.+||+.+|++||++.+|++.|++.....
T Consensus       233 ~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         233 MPC-----PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             CCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             CCC-----CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence            111     1125567999999999999999999999999999875544

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.1e-33  Score=222.32  Aligned_cols=148  Identities=22%  Similarity=0.323  Sum_probs=108.8

Q ss_pred             eeeeecc----ccccccc---CCCCCCChHHHHHHHHHHHHHHHhhhcCC--CCCeecCCCCCCceeecC----------
Q 040682            3 KKLVYSK----LLDAANI---DKKRLLDWQVRARIIEGIAQGLLYLHQYS--RLRIIHRDLKASNILLDS----------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~iiH~dik~~nil~~~----------   63 (216)
                      .||||||    +|.++..   .....+++.+++.++.|++.||+|||+++  ..+|+||||||+|||++.          
T Consensus        80 ~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG  159 (269)
T d2java1          80 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  159 (269)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHH
T ss_pred             EEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecc
Confidence            4899999    6766622   34567999999999999999999999864  235999999999999986          


Q ss_pred             -------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           64 -------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        64 -------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                         .|+|||++.+..++.++|||||||++|||++|+.||.......  ..    ......... 
T Consensus       160 ~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~--~~----~~i~~~~~~-  232 (269)
T d2java1         160 LARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--LA----GKIREGKFR-  232 (269)
T ss_dssp             HHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HH----HHHHHTCCC-
T ss_pred             ceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHH--HH----HHHHcCCCC-
Confidence                               2999999999999999999999999999999999986432211  11    111111111 


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                          .+     +...+.++.+++.+||+.||++|||+.|+++
T Consensus       233 ----~~-----~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         233 ----RI-----PYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             ----CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----CC-----CcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                11     1124567899999999999999999999875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.98  E-value=1.8e-33  Score=221.88  Aligned_cols=153  Identities=24%  Similarity=0.350  Sum_probs=118.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|..+ ....+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        86 ~~lvmE~~~g~~L~~~-~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---iiHrDiKP~NIll~~~~~~~l~d~~~~~~~  161 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDI-VHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI  161 (277)
T ss_dssp             EEEEEECCCEEEHHHH-HHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred             EEEEEECCCCCEehhh-hcccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCccccCcccccCccccceeehhhhhhhh
Confidence            5899999    55554 334457999999999999999999999999   999999999999965               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||++.+..++.++|||||||++|||++|+.||.......     .........      
T Consensus       162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-----~~~~~~~~~------  230 (277)
T d1o6ya_         162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-----VAYQHVRED------  230 (277)
T ss_dssp             C----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHCC------
T ss_pred             ccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHH-----HHHHHHhcC------
Confidence                             2999999999999999999999999999999999986432211     111111111      


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCC-CHHHHHHHHcccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRP-TMSDVVSMISNEH  172 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~evl~~L~~~~  172 (216)
                       +.. ........+..+.+++.+||+.||++|| |+.+++..|.++.
T Consensus       231 -~~~-~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         231 -PIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             -CCC-GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             -CCC-CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence             000 0111111456789999999999999999 8999998887653

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2.4e-33  Score=220.83  Aligned_cols=150  Identities=23%  Similarity=0.295  Sum_probs=119.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    ++.++.......+++.+++.++.|++.||+|||+++   ++||||||+||+++.               
T Consensus        82 ~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~  158 (273)
T d1mp8a_          82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM  158 (273)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             EEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccC---eeccccchhheeecCCCcEEEccchhheec
Confidence            5899999    555555566677999999999999999999999998   999999999999975               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                     .|+|||++.+..++.++|||||||++|||++ |.+||.......  ....+    ..+.     .
T Consensus       159 ~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~--~~~~i----~~~~-----~  227 (273)
T d1mp8a_         159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRI----ENGE-----R  227 (273)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHH----HTTC-----C
T ss_pred             cCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH--HHHHH----HcCC-----C
Confidence                           2999999999999999999999999999998 788876443221  11111    1110     0


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      +..     +..++..+.+++.+||+.||++|||+.||++.|+.+
T Consensus       228 ~~~-----~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i  266 (273)
T d1mp8a_         228 LPM-----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  266 (273)
T ss_dssp             CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCC-----CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            111     112556799999999999999999999999999875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-33  Score=219.59  Aligned_cols=151  Identities=22%  Similarity=0.274  Sum_probs=117.8

Q ss_pred             eeeeecc----ccccccc-CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            3 KKLVYSK----LLDAANI-DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      .||||||    +|.++.. .....+++.+++.++.|++.||+|||+.+   ++||||||+||+++.+             
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~s~~  152 (262)
T d1byga_          76 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKE  152 (262)
T ss_dssp             CEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc---eeccccchHhheecCCCCEeeccccccee
Confidence            4899999    6666633 23346899999999999999999999998   9999999999999862             


Q ss_pred             -------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           65 -------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        65 -------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                   |+|||++.+..++.++|||||||++|||++ |..|+.......  ....+    ..+     ..+..
T Consensus       153 ~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~--~~~~i----~~~-----~~~~~  221 (262)
T d1byga_         153 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRV----EKG-----YKMDA  221 (262)
T ss_dssp             ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHHH----TTT-----CCCCC
T ss_pred             cCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH--HHHHH----HcC-----CCCCC
Confidence                         999999999999999999999999999998 566664322211  11111    111     11111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                      +.     .++.++.+++.+||+.||++|||+.+|++.|+.+.
T Consensus       222 ~~-----~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         222 PD-----GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             CT-----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             Cc-----cCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            11     14467899999999999999999999999998763

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.6e-33  Score=222.49  Aligned_cols=150  Identities=23%  Similarity=0.322  Sum_probs=117.5

Q ss_pred             eeeeecc----cccccccCC---------------CCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANIDK---------------KRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+||||    +|.++....               ...+++.+++.++.|++.||+|||+++   |+||||||+|||++.
T Consensus        94 ~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~---ivHrDiKp~NiLl~~  170 (299)
T d1fgka_          94 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTE  170 (299)
T ss_dssp             CEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECT
T ss_pred             EEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC---EEeeeecccceeecC
Confidence            5899999    666663222               245899999999999999999999998   999999999999975


Q ss_pred             C-------------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhh
Q 040682           64 G-------------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLG  111 (216)
Q Consensus        64 ~-------------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~  111 (216)
                      +                               |+|||.+.+..++.++|||||||++|||++ |..||......      
T Consensus       171 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~------  244 (299)
T d1fgka_         171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE------  244 (299)
T ss_dssp             TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------
T ss_pred             CCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH------
Confidence            2                               999999999999999999999999999998 67776532221      


Q ss_pred             hhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          112 HAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ..+..+..+.     .+..+.     .++..+.+++.+||+.+|++|||+.||++.|+++
T Consensus       245 ~~~~~i~~~~-----~~~~p~-----~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i  294 (299)
T d1fgka_         245 ELFKLLKEGH-----RMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  294 (299)
T ss_dssp             HHHHHHHTTC-----CCCCCS-----SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHcCC-----CCCCCc-----cchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            1111121111     111111     1455789999999999999999999999999876

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.9e-33  Score=223.40  Aligned_cols=152  Identities=21%  Similarity=0.282  Sum_probs=119.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++|+||    +|.+....+...+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        85 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~---iiHrDlKp~NIll~~~~~~kl~DFGla~~~  161 (317)
T d1xkka_          85 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL  161 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCCSHHHHT
T ss_pred             eeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcC---cccCcchhhcceeCCCCCeEeeccccceec
Confidence            3567777    565555666778999999999999999999999998   999999999999975               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                      .|+|||++.+..++.++|||||||++|||++ |..||.......  ....    ...+     .
T Consensus       162 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~--~~~~----i~~~-----~  230 (317)
T d1xkka_         162 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSI----LEKG-----E  230 (317)
T ss_dssp             TTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG--HHHH----HHHT-----C
T ss_pred             ccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH--HHHH----HHcC-----C
Confidence                            2999999999999999999999999999998 777875433221  1111    1111     0


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                      .+..     +..++..+.+++.+||+.+|++|||+.||++.|..+..
T Consensus       231 ~~~~-----p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         231 RLPQ-----PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             CCCC-----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCC-----CcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence            0111     11255678999999999999999999999999887643

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-32  Score=221.38  Aligned_cols=161  Identities=22%  Similarity=0.342  Sum_probs=114.1

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcC-CCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQY-SRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .||||||    +|.++.. +.+.+++.+++.++.|++.||.|||++ +   |+||||||+|||++.              
T Consensus        79 ~~iVmEy~~gg~L~~~l~-~~~~l~~~~~~~~~~qil~aL~yLH~~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~  154 (322)
T d1s9ja_          79 ISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQ  154 (322)
T ss_dssp             EEEEEECCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHH
T ss_pred             EEEEEEcCCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEccccCHHHeeECCCCCEEEeeCCCccc
Confidence            5899999    6666633 335699999999999999999999974 7   999999999999976              


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc-----------
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD-----------  119 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~-----------  119 (216)
                                   .|+|||++.+..++.++||||+||++|||++|+.||....................           
T Consensus       155 ~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (322)
T d1s9ja_         155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG  234 (322)
T ss_dssp             HHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------
T ss_pred             cCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccc
Confidence                         29999999999999999999999999999999999976543321000000000000           


Q ss_pred             Cccc-cccc--ccc-------------ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          120 DRVH-ELID--PVI-------------TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       120 ~~~~-~~~~--~~~-------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .... ...+  +..             +........+.++.+++.+||+.||.+|||+.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         235 RPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             -----------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            0000 0000  000             0000001134578999999999999999999999863

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-32  Score=217.64  Aligned_cols=168  Identities=21%  Similarity=0.184  Sum_probs=122.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCC-----CCCeecCCCCCCceeecCC---------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYS-----RLRIIHRDLKASNILLDSG---------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~iiH~dik~~nil~~~~---------   64 (216)
                      .||||||    +|.++..  +..+++.++..++.|++.||+|||+..     ..+|+||||||+|||++.+         
T Consensus        76 ~~lv~Ey~~~g~L~~~l~--~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFG  153 (303)
T d1vjya_          76 LWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  153 (303)
T ss_dssp             EEEEEECCTTCBHHHHHH--HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEEEecccCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecC
Confidence            4899999    6666643  346999999999999999999999741     2349999999999999762         


Q ss_pred             ------------------------CCChhhhhcCC------CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhh-
Q 040682           65 ------------------------YMPPEYALRGF------FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHA-  113 (216)
Q Consensus        65 ------------------------y~aPE~~~~~~------~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~-  113 (216)
                                              |+|||++.+..      ++.++|||||||++|||++|..|+.............. 
T Consensus       154 l~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~  233 (303)
T d1vjya_         154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP  233 (303)
T ss_dssp             TCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred             ccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccc
Confidence                                    99999987653      56789999999999999999888755443332111110 


Q ss_pred             ----hhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccc
Q 040682          114 ----WDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEH  172 (216)
Q Consensus       114 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~  172 (216)
                          ............++|.++....+.+....+.+++.+||+.||++|||+.||++.|+.+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~  296 (303)
T d1vjya_         234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             SSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence                00000111112233444333334446778999999999999999999999999998753

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.4e-33  Score=219.86  Aligned_cols=150  Identities=25%  Similarity=0.297  Sum_probs=117.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    ++.+......+.+++..++.++.|++.||.|||+++   |+||||||+||+++.               
T Consensus        85 ~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDikp~NIll~~~~~vkl~DfGl~~~~  161 (273)
T d1u46a_          85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL  161 (273)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             hheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCC---EeeeeecHHHhccccccceeeccchhhhhc
Confidence            4789999    555554555667999999999999999999999998   999999999999865               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHh-CCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILS-GKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       .|+|||.+.+..++.++|||||||++|||++ |..||.......  ....+   ....     
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~--~~~~i---~~~~-----  231 (273)
T d1u46a_         162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--ILHKI---DKEG-----  231 (273)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHH---HTSC-----
T ss_pred             ccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH--HHHHH---HhCC-----
Confidence                             1899999999999999999999999999998 899986432221  11111   1111     


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISN  170 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~  170 (216)
                      ..+..     +..++..+.+++.+||+.||++|||+.||++.|++
T Consensus       232 ~~~~~-----~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         232 ERLPR-----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             CCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCC-----cccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            01111     11144578999999999999999999999999875

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-32  Score=219.49  Aligned_cols=154  Identities=23%  Similarity=0.228  Sum_probs=120.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++||||    +|.++.......+++..++.++.|++.||.|||+.+   |+||||||+|||++.+              
T Consensus       104 ~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~---iiHrDLK~~NILl~~~~~~kL~DFG~~~~~  180 (311)
T d1r0pa_         104 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM  180 (311)
T ss_dssp             EEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSSGGGCCT
T ss_pred             eEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccC---cccCCccHHhEeECCCCCEEEecccchhhc
Confidence            5899999    777776666677889999999999999999999998   9999999999999762              


Q ss_pred             -------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           65 -------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        65 -------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                         |+|||.+.+..++.++||||||+++|||++|..||....... ........   ..     
T Consensus       181 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~-~~~~~i~~---g~-----  251 (311)
T d1r0pa_         181 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQ---GR-----  251 (311)
T ss_dssp             TTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHHT---TC-----
T ss_pred             cccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH-HHHHHHHc---CC-----
Confidence                               899999999999999999999999999999888865432211 11111111   11     


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHcccccc
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHLN  174 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~~  174 (216)
                       .+..+     ..++..+.+++.+||+.||++||++.||++.|+++...
T Consensus       252 -~~~~p-----~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         252 -RLLQP-----EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             -CCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             -CCCCc-----ccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence             11111     11455789999999999999999999999999987544

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.97  E-value=3.5e-32  Score=220.98  Aligned_cols=149  Identities=19%  Similarity=0.215  Sum_probs=116.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++.....+.+++.++..++.||+.||+|||+++   |+||||||+|||++.               
T Consensus        98 ~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHrDiKp~NIll~~~~~~~vkL~DFG~a~  174 (350)
T d1koaa2          98 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTA  174 (350)
T ss_dssp             EEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTSCCEEECCCTTCE
T ss_pred             EEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeeeeechhHeeeccCCCCeEEEeecchhe
Confidence            5899999    665655556667999999999999999999999999   999999999999953               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||++.+..++.++||||+||++|+|++|..||.+.....  ....+    ....      .
T Consensus       175 ~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~--~~~~i----~~~~------~  242 (350)
T d1koaa2         175 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE--TLRNV----KSCD------W  242 (350)
T ss_dssp             ECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH----HHTC------C
T ss_pred             ecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHH--HHHHH----HhCC------C
Confidence                           2999999999999999999999999999999999986433211  11111    0110      0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ........ ..+..+.+|+.+||+.||++|||+.|++++
T Consensus       243 ~~~~~~~~-~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         243 NMDDSAFS-GISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             CSCCGGGG-GCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             CCCccccc-CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            01111111 145678999999999999999999999885

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=6.5e-33  Score=221.78  Aligned_cols=145  Identities=30%  Similarity=0.415  Sum_probs=111.8

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .||||||    +++.+ ...++.+++.+++.++.|++.||.|||+++   |+||||||+|||++.+              
T Consensus        90 ~~iv~E~~~~g~l~~~-~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~  165 (309)
T d1u5ra_          90 AWLVMEYCLGSASDLL-EVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM  165 (309)
T ss_dssp             EEEEEECCSEEHHHHH-HHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred             EEEEEEecCCCchHHH-HHhCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEECCCCCEEEeeccccccc
Confidence            5899999    44433 344567999999999999999999999999   9999999999999762              


Q ss_pred             -----------CCChhhhhc---CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           65 -----------YMPPEYALR---GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        65 -----------y~aPE~~~~---~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                 |+|||++.+   ..++.++|||||||++|||++|..||.......     .........      .+..
T Consensus       166 ~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~-----~~~~i~~~~------~~~~  234 (309)
T d1u5ra_         166 APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALYHIAQNE------SPAL  234 (309)
T ss_dssp             SSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSC------CCCC
T ss_pred             CCCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHH-----HHHHHHhCC------CCCC
Confidence                       999999864   358999999999999999999999986432211     111111111      1111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ...    .+++.+.+++.+||+.||++|||+.|+++
T Consensus       235 ~~~----~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         235 QSG----HWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             SCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCC----CCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            111    14567899999999999999999999986

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-32  Score=220.39  Aligned_cols=153  Identities=18%  Similarity=0.187  Sum_probs=116.5

Q ss_pred             eeeeecc----cccccccC-CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC--------------
Q 040682            3 KKLVYSK----LLDAANID-KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS--------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~--------------   63 (216)
                      .||||||    +|.++... ....+++.+++.++.|++.||+|||+++   |+||||||+|||++.              
T Consensus        84 ~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~---iiHRDiKp~NIll~~~~~~~~~Kl~DFG~  160 (335)
T d2ozaa1          84 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF  160 (335)
T ss_dssp             EEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC---Cccccccccccccccccccccccccccce
Confidence            5899999    66666433 3457999999999999999999999999   999999999999964              


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||++.+..++.++||||+||++|+|++|+.||.........  ....    ......  
T Consensus       161 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~--~~~~----~~i~~~--  232 (335)
T d2ozaa1         161 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--PGMK----TRIRMG--  232 (335)
T ss_dssp             CEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------------CCCSC--
T ss_pred             eeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHH--HHHH----HHHhcC--
Confidence                             299999999999999999999999999999999999754433210  0000    000000  


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ....+. ......+.++.+|+.+||+.||++|||+.|++++
T Consensus       233 ~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         233 QYEFPN-PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             SSSCCT-THHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCCCC-cccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            011111 1122356789999999999999999999999874

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.97  E-value=3.4e-32  Score=221.21  Aligned_cols=156  Identities=22%  Similarity=0.221  Sum_probs=119.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.+........+++.+++.++.||+.||+|||+++   |+||||||+|||++.               
T Consensus       101 ~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHRDiKp~NILl~~~~~~~vkL~DFGla~  177 (352)
T d1koba_         101 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLAT  177 (352)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred             EEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccccccccccccCCCeEEEeecccce
Confidence            5899999    555555555667999999999999999999999999   999999999999963               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|+|||++.+..++.++||||+||++|+|++|..||.+.....  ....+    ....      .
T Consensus       178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~--~~~~i----~~~~------~  245 (352)
T d1koba_         178 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE--TLQNV----KRCD------W  245 (352)
T ss_dssp             ECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHH----HHCC------C
T ss_pred             ecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH----HhCC------C
Confidence                           1999999999999999999999999999999999986433211  11111    0110      0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hcccccc
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM--ISNEHLN  174 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--L~~~~~~  174 (216)
                      ..+....+ ..+.++.+|+.+||+.||.+|||+.|++++  +++....
T Consensus       246 ~~~~~~~~-~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~~  292 (352)
T d1koba_         246 EFDEDAFS-SVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSN  292 (352)
T ss_dssp             CCCSSTTT-TSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCTT
T ss_pred             CCCccccc-CCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCcch
Confidence            11111111 145678999999999999999999999875  6654433

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.3e-32  Score=214.64  Aligned_cols=160  Identities=21%  Similarity=0.261  Sum_probs=115.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .++||||    ++..........+++..++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        90 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~---ivHrDiKp~NILi~~~~~~kl~dfg~~~~~  166 (305)
T d1blxa_          90 LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY  166 (305)
T ss_dssp             EEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred             EEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecCCCccEEEEcCCCCeeecchhhhhhh
Confidence            4789999    233334556667999999999999999999999999   999999999999976               


Q ss_pred             -------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc---c------Cc
Q 040682           64 -------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK---D------DR  121 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~---~------~~  121 (216)
                                   .|+|||++.+..++.++||||+||++|||++|+.||........  .........   .      ..
T Consensus       167 ~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~  244 (305)
T d1blxa_         167 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ--LGKILDVIGLPGEEDWPRDVA  244 (305)
T ss_dssp             CGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCGGGSCTTCS
T ss_pred             cccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHH--HHHHHHhhCCCchhccccccc
Confidence                         29999999999999999999999999999999999975432211  111100000   0      00


Q ss_pred             cc-cccc--cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          122 VH-ELID--PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       122 ~~-~~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      .. ....  ............++.+.+|+.+||+.||++|||+.|++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             chhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            00 0000  0000011111245678899999999999999999999864

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=9.4e-32  Score=214.87  Aligned_cols=148  Identities=22%  Similarity=0.225  Sum_probs=114.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++. ...+.+++.++..++.|++.||+|||+++   |+||||||+|||+..               
T Consensus        82 ~~lvmE~~~gg~L~~~l-~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a  157 (307)
T d1a06a_          82 LYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLS  157 (307)
T ss_dssp             EEEEECCCCSCBHHHHH-HTCSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCC---
T ss_pred             EEEEEeccCCCcHHHhh-hcccCCCHHHHHHHHHHHHHHHHhhhhce---eeeEEecccceeecccCCCceEEEecccee
Confidence            5899999    666553 33567999999999999999999999998   999999999999842               


Q ss_pred             ----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           64 ----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        64 ----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                      .|+|||++.+..++.++||||+||++|||++|..||.......  ....    ......     
T Consensus       158 ~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~--~~~~----i~~~~~-----  226 (307)
T d1a06a_         158 KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--LFEQ----ILKAEY-----  226 (307)
T ss_dssp             ---------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHH----HHTTCC-----
T ss_pred             EEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHH--HHHH----HhccCC-----
Confidence                            2999999999999999999999999999999999986432211  1111    111100     


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                       .... +...+.+..+.+++.+||+.||++|||+.|++++
T Consensus       227 -~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         227 -EFDS-PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             -CCCT-TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             -CCCC-ccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence             0000 1111245678999999999999999999999874

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.5e-32  Score=217.02  Aligned_cols=152  Identities=24%  Similarity=0.257  Sum_probs=117.8

Q ss_pred             eeeeecc----ccccccc---------------CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC
Q 040682            3 KKLVYSK----LLDAANI---------------DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~   63 (216)
                      .|+||||    +|.++..               .....+++.++..++.|++.||.|||+++   |+||||||+|||++.
T Consensus        86 ~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~---iiHrDlkp~NIL~~~  162 (309)
T d1fvra_          86 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGE  162 (309)
T ss_dssp             EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECG
T ss_pred             eEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC---ccccccccceEEEcC
Confidence            5899999    6666632               23467999999999999999999999998   999999999999875


Q ss_pred             ----------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCC-CCCcCCCCccchhhhhh
Q 040682           64 ----------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKK-STAVYNTGSFNLLGHAW  114 (216)
Q Consensus        64 ----------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~-~~~~~~~~~~~~~~~~~  114 (216)
                                                  .|+|||.+.+..++.++|||||||++|||++|.. ||......  .....  
T Consensus       163 ~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~--~~~~~--  238 (309)
T d1fvra_         163 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEK--  238 (309)
T ss_dssp             GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHH--
T ss_pred             CCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHH--HHHHH--
Confidence                                        2999999999999999999999999999999765 44322111  11111  


Q ss_pred             hhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccccc
Q 040682          115 DLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNEHL  173 (216)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~~~  173 (216)
                        ...+     ..+..+     ..++.++.+++.+||+.||++|||+.||++.|+++..
T Consensus       239 --i~~~-----~~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         239 --LPQG-----YRLEKP-----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             --GGGT-----CCCCCC-----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --HHhc-----CCCCCC-----ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence              1111     111111     1145679999999999999999999999999998744

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-32  Score=217.69  Aligned_cols=143  Identities=21%  Similarity=0.202  Sum_probs=112.7

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .||||||    +|.++ ....+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.+              
T Consensus        83 ~~ivmEy~~gg~L~~~-~~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~NIll~~~~~vkl~DFG~a~~~  158 (288)
T d1uu3a_          83 LYFGLSYAKNGELLKY-IRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL  158 (288)
T ss_dssp             EEEEECCCTTEEHHHH-HHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEccCCCCHHHh-hhccCCCCHHHHHHHHHHHHHHHHhhcccc---EEcCcCCccccccCCCceEEecccccceec
Confidence            5899999    55554 334457999999999999999999999999   9999999999999762              


Q ss_pred             -----------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccc
Q 040682           65 -----------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELID  127 (216)
Q Consensus        65 -----------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                                       |+|||++.+..++.++||||+||++|||++|..||.......  ....    .....      
T Consensus       159 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~--~~~~----i~~~~------  226 (288)
T d1uu3a_         159 SPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL--IFQK----IIKLE------  226 (288)
T ss_dssp             C----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH----HHTTC------
T ss_pred             ccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHH--HHHH----HHcCC------
Confidence                             999999999999999999999999999999999996432211  1111    11110      


Q ss_pred             cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          128 PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ...+     ...+.++.+++.+||+.||++|||+.|+++
T Consensus       227 ~~~p-----~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         227 YDFP-----EKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             CCCC-----TTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             CCCC-----ccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            1111     114557899999999999999999998753

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-31  Score=212.57  Aligned_cols=160  Identities=23%  Similarity=0.242  Sum_probs=113.3

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .||||||   .+..........+++.++..+++|++.||+|||+++   |+||||||+|||++.                
T Consensus        75 ~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~  151 (299)
T d1ua2a_          75 ISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFG  151 (299)
T ss_dssp             CEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             eeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccc---eecccCCcceEEecCCCccccccCccccccC
Confidence            4899999   222223455667999999999999999999999999   999999999999976                


Q ss_pred             -------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc---cCccc---
Q 040682           64 -------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK---DDRVH---  123 (216)
Q Consensus        64 -------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---  123 (216)
                                   .|+|||++.+. .++.++|||||||++|||++|..||........  ...+.....   .....   
T Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~--l~~i~~~~~~~~~~~~~~~~  229 (299)
T d1ua2a_         152 SPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ--LTRIFETLGTPTEEQWPDMC  229 (299)
T ss_dssp             SCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTTSSSTT
T ss_pred             CCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHH--HHHHHHhcCCCChhhccchh
Confidence                         29999998755 679999999999999999999999865432211  111111100   00000   


Q ss_pred             -----cccc--cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          124 -----ELID--PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       124 -----~~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                           ....  +..............+.+|+.+||+.||++|||+.|++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         230 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             ccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence                 0000  0000001111135678999999999999999999999863

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-31  Score=213.36  Aligned_cols=152  Identities=23%  Similarity=0.312  Sum_probs=114.6

Q ss_pred             eeeeecc----cccccccC-----------------CCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceee
Q 040682            3 KKLVYSK----LLDAANID-----------------KKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL   61 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~-----------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~   61 (216)
                      .||||||    +|.++...                 ....+++..++.++.||+.||+|||+++   ++||||||+||++
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~---ivHrDLKp~NIl~  178 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL  178 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccccccccc
Confidence            5899999    55555222                 2336899999999999999999999998   9999999999999


Q ss_pred             cCC-------------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchh
Q 040682           62 DSG-------------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLL  110 (216)
Q Consensus        62 ~~~-------------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~  110 (216)
                      +..                               |+|||++.+..++.++|||||||++|||+++..|+.........+.
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~  258 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY  258 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred             cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            752                               9999999999999999999999999999995555432222211111


Q ss_pred             hhhhhhhccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          111 GHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ..    ...+     ..+..+     ..++..+.+|+.+||+.||++|||+.||++.|++.
T Consensus       259 ~~----i~~~-----~~~~~~-----~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~  305 (311)
T d1t46a_         259 KM----IKEG-----FRMLSP-----EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (311)
T ss_dssp             HH----HHHT-----CCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HH----HhcC-----CCCCCc-----ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            11    1111     111111     11456789999999999999999999999999864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=6e-32  Score=215.54  Aligned_cols=133  Identities=23%  Similarity=0.396  Sum_probs=105.8

Q ss_pred             CCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------------------------CCCh
Q 040682           20 RLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------------------------YMPP   68 (216)
Q Consensus        20 ~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------------------------y~aP   68 (216)
                      ..+++.+++.++.|++.||+|||+++   ++||||||+|||++.+                               |+||
T Consensus       135 ~~l~~~~~~~i~~qi~~gl~ylH~~~---ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aP  211 (301)
T d1lufa_         135 PPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP  211 (301)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHhhhcccCC---eEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCH
Confidence            35899999999999999999999998   9999999999999862                               9999


Q ss_pred             hhhhcCCCCcchhhhhHHHHHHHHHhCCC-CCCcCCCCccchhhhhhhhhccCccccccccccccchhhHHHHHHHHHHH
Q 040682           69 EYALRGFFSIKSDVFSFGVLMLEILSGKK-STAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQDEISLSMLMRYVKVA  147 (216)
Q Consensus        69 E~~~~~~~~~~~Dv~s~G~~l~ell~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  147 (216)
                      |.+.+..++.++|||||||++|||++|.. ||......+  ...    ....+..     +..     +..++.++.+++
T Consensus       212 E~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e--~~~----~v~~~~~-----~~~-----p~~~~~~~~~li  275 (301)
T d1lufa_         212 ESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE--VIY----YVRDGNI-----LAC-----PENCPLELYNLM  275 (301)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHH----HHHTTCC-----CCC-----CTTCCHHHHHHH
T ss_pred             HHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHH--HHH----HHHcCCC-----CCC-----CccchHHHHHHH
Confidence            99999999999999999999999999864 554322211  111    1111111     111     112455789999


Q ss_pred             HhccccCCCCCCCHHHHHHHHccc
Q 040682          148 LLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       148 ~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      .+||+.+|++|||+.||++.|+++
T Consensus       276 ~~cl~~~P~~RPt~~ev~~~L~~i  299 (301)
T d1lufa_         276 RLCWSKLPADRPSFCSIHRILQRM  299 (301)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             HHHcCCChhHCcCHHHHHHHHHHh
Confidence            999999999999999999999975

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.5e-32  Score=213.90  Aligned_cols=147  Identities=22%  Similarity=0.224  Sum_probs=113.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++. ...+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        88 ~~iv~E~~~gg~L~~~i-~~~~~l~~~~~~~~~~qi~~al~yLH~~~---ivHrDiKp~Nill~~~~~~~~~vkl~DfG~  163 (293)
T d1jksa_          88 VILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL  163 (293)
T ss_dssp             EEEEEECCCSCBHHHHH-HHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEEEEcCCCccccchh-ccccccchhHHHHHHHHHHHHHHhhhhcc---eeecccccceEEEecCCCcccceEecchhh
Confidence            5899999    666653 23457999999999999999999999999   999999999999864               


Q ss_pred             -----------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccc
Q 040682           64 -----------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELI  126 (216)
Q Consensus        64 -----------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (216)
                                       .|+|||++.+..++.++|||||||++|||++|+.||.......  ....    .....     
T Consensus       164 a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~--~~~~----i~~~~-----  232 (293)
T d1jksa_         164 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLAN----VSAVN-----  232 (293)
T ss_dssp             CEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH----HHTTC-----
T ss_pred             hhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH--HHHH----HHhcC-----
Confidence                             1999999999999999999999999999999999986433211  1111    11110     


Q ss_pred             ccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          127 DPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       .... .......+..+.+++.+||+.||++|||+.|+++
T Consensus       233 -~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         233 -YEFE-DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             -CCCC-HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -CCCC-chhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             0011 1111124567899999999999999999999976

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=3.2e-31  Score=211.04  Aligned_cols=157  Identities=15%  Similarity=0.174  Sum_probs=118.4

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .++||||   ++.+......+.+++.++..++.|++.||+|||+++   |+||||||+|||++.                
T Consensus        78 ~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~  154 (299)
T d1ckia_          78 NVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  154 (299)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCSSCE
T ss_pred             EEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHhhccccccCCCceeeeeccCcce
Confidence            5889999   555555555677999999999999999999999999   999999999998753                


Q ss_pred             -----------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccC
Q 040682           64 -----------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDD  120 (216)
Q Consensus        64 -----------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~  120 (216)
                                             .|+|||.+.+..++.++|||||||++|||++|..||................   ..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~---~~  231 (299)
T d1ckia_         155 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS---EK  231 (299)
T ss_dssp             ECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHH---HH
T ss_pred             eccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhh---cc
Confidence                                   2999999999999999999999999999999999997654433211100000   00


Q ss_pred             ccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          121 RVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ..    ..  +.......++.++.+++..||+.+|++||++.++.+.|++.
T Consensus       232 ~~----~~--~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         232 KM----ST--PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             HH----HS--CHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             cC----CC--ChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            00    00  00011112456789999999999999999999998888864

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.4e-31  Score=209.25  Aligned_cols=164  Identities=16%  Similarity=0.180  Sum_probs=116.1

Q ss_pred             eeeeecc---ccccc-ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK---LLDAA-NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||   .+..+ .......+++.+++.++.|++.||+|||+++   ||||||||+|||++.               
T Consensus        76 ~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~---IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~  152 (298)
T d1gz8a_          76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF  152 (298)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTHHHHH
T ss_pred             eeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC---EEccccCchheeecccCcceeccCCcceec
Confidence            5899999   33333 4455667999999999999999999999999   999999999999975               


Q ss_pred             --------------CCCChhhhhcCC-CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhc---cCcccc-
Q 040682           64 --------------GYMPPEYALRGF-FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWK---DDRVHE-  124 (216)
Q Consensus        64 --------------~y~aPE~~~~~~-~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-  124 (216)
                                    .|+|||++.... ++.++||||+||++|+|++|+.||...+....  .........   ...... 
T Consensus       153 ~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~  230 (298)
T d1gz8a_         153 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRTLGTPDEVVWPGV  230 (298)
T ss_dssp             CCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTG
T ss_pred             cCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHH--HHHHHHhcCCCchhhcccc
Confidence                          299999988765 57899999999999999999999965432211  000000000   000000 


Q ss_pred             -----ccc--cccccch---hhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hccc
Q 040682          125 -----LID--PVITQDE---ISLSMLMRYVKVALLCVQETVADRPTMSDVVSM--ISNE  171 (216)
Q Consensus       125 -----~~~--~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--L~~~  171 (216)
                           ...  +......   .....+.++.+|+.+||+.||++|||+.|++++  ++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             ccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence                 000  0000000   001135678999999999999999999999975  6554

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-31  Score=213.59  Aligned_cols=148  Identities=16%  Similarity=0.217  Sum_probs=115.3

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .||||||    +|.++.......+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        76 ~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~---iiHrDlKp~NIll~~~~~~~ikl~DFG~~~  152 (321)
T d1tkia_          76 LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQAR  152 (321)
T ss_dssp             EEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcC---CCcccccccceeecCCCceEEEEcccchhh
Confidence            5899999    565555455557999999999999999999999999   999999999999964               


Q ss_pred             ---------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccc
Q 040682           64 ---------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDP  128 (216)
Q Consensus        64 ---------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (216)
                                     .|++||...+..++.++||||+||++|+|++|..||.......  ....    .....      .
T Consensus       153 ~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~--~~~~----i~~~~------~  220 (321)
T d1tkia_         153 QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ--IIEN----IMNAE------Y  220 (321)
T ss_dssp             ECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHH----HHHTC------C
T ss_pred             ccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHH--HHHH----HHhCC------C
Confidence                           1999999999999999999999999999999999986543211  1111    10000      0


Q ss_pred             ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          129 VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       129 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                      ..+. ......+.++.+|+.+||+.||++|||+.|+++
T Consensus       221 ~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         221 TFDE-EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             CCCH-HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCCh-hhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1111 111124567899999999999999999999987

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=7.4e-31  Score=214.18  Aligned_cols=146  Identities=21%  Similarity=0.186  Sum_probs=111.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .|+||||    +|.++. .....+++.+++.++.||+.||+|||+++   |+||||||+|||++..              
T Consensus        82 ~~ivmE~~~gg~L~~~l-~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---iiHrDlKP~NILl~~~g~iKl~DFGla~~~  157 (364)
T d1omwa3          82 LSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF  157 (364)
T ss_dssp             EEEEECCCCSCBHHHHH-HHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSSSCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCcHHHHH-HhcccccHHHHHHHHHHHHHHHHHHHHCC---ccceeeccceeEEcCCCcEEEeeeceeeec
Confidence            5899999    666653 33456899999999999999999999999   9999999999999762              


Q ss_pred             -------------CCChhhhhc-CCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccc
Q 040682           65 -------------YMPPEYALR-GFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVI  130 (216)
Q Consensus        65 -------------y~aPE~~~~-~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (216)
                                   |+|||++.+ ..++.++|||||||++|||++|+.||..........  . .......      ....
T Consensus       158 ~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~--~-~~~~~~~------~~~~  228 (364)
T d1omwa3         158 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--I-DRMTLTM------AVEL  228 (364)
T ss_dssp             SSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH--H-HHHSSSC------CCCC
T ss_pred             CCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH--H-HHhcccC------CCCC
Confidence                         999999975 468999999999999999999999997544332110  0 0000000      0111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 040682          131 TQDEISLSMLMRYVKVALLCVQETVADRPT-----MSDVVS  166 (216)
Q Consensus       131 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~  166 (216)
                           +...+.++.+++.+||+.||++||+     +.|+++
T Consensus       229 -----~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         229 -----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             -----CSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             -----CCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence                 1114557899999999999999999     677775

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.1e-31  Score=206.91  Aligned_cols=139  Identities=19%  Similarity=0.347  Sum_probs=108.1

Q ss_pred             eeeeecc--ccccc--ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK--LLDAA--NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey--~l~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||  ...++  .......+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NIll~~~~~~vkl~DFG~a~~  160 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL  160 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---CccccCcccceEEecCCCeEEECcccccee
Confidence            5899999  11221  2334567999999999999999999999999   999999999999974               


Q ss_pred             -------------CCCChhhhhcCCC-CcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           64 -------------GYMPPEYALRGFF-SIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        64 -------------~y~aPE~~~~~~~-~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                   .|+|||++.+..+ +.++||||+||++|||++|+.||.....        .   ....       ..
T Consensus       161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--------i---~~~~-------~~  222 (273)
T d1xwsa_         161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------I---IRGQ-------VF  222 (273)
T ss_dssp             CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------H---HHCC-------CC
T ss_pred             cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH--------H---hhcc-------cC
Confidence                         1999999988765 5778999999999999999999853210        0   0000       00


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ...     ..+.++.+++.+||+.||++|||+.|++++
T Consensus       223 ~~~-----~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         223 FRQ-----RVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             CSS-----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCC-----CCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            000     134568999999999999999999999863

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.3e-30  Score=208.46  Aligned_cols=150  Identities=22%  Similarity=0.279  Sum_probs=115.3

Q ss_pred             eeeeecc----ccccccc---------CCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-----
Q 040682            3 KKLVYSK----LLDAANI---------DKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-----   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-----   64 (216)
                      .++||||    +|.++..         .....+++.++..++.|++.||.|||+++   |+||||||+|||++.+     
T Consensus        98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~---ivHrDlk~~NiLld~~~~~Kl  174 (308)
T d1p4oa_          98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI  174 (308)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEE
T ss_pred             eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeeceEcCCceeecCCceEEE
Confidence            5899999    5655522         22234789999999999999999999998   9999999999999862     


Q ss_pred             --------------------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCC-CCCCcCCCCccchhhhhhhhh
Q 040682           65 --------------------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGK-KSTAVYNTGSFNLLGHAWDLW  117 (216)
Q Consensus        65 --------------------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~-~~~~~~~~~~~~~~~~~~~~~  117 (216)
                                                |+|||.+.+..++.++||||||+++|||++|. .|+......     +. ....
T Consensus       175 ~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~-----~~-~~~i  248 (308)
T d1p4oa_         175 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-----QV-LRFV  248 (308)
T ss_dssp             CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-----HH-HHHH
T ss_pred             eecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHH-----HH-HHHH
Confidence                                      99999999999999999999999999999986 555322111     11 1111


Q ss_pred             ccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          118 KDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                      ..+..     +..     +..++..+.+++.+||+.+|++|||+.+|++.|++.
T Consensus       249 ~~~~~-----~~~-----p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         249 MEGGL-----LDK-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             HTTCC-----CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HhCCC-----CCC-----cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            11111     111     111456799999999999999999999999999985

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.96  E-value=1.3e-30  Score=205.37  Aligned_cols=148  Identities=22%  Similarity=0.240  Sum_probs=113.0

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .||||||    +|.++. ...+.+++.+++.++.||+.||+|||+++   |+||||||+|||++.+              
T Consensus        85 ~~ivmE~~~~g~L~~~l-~~~~~l~e~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~  160 (277)
T d1phka_          85 FFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQL  160 (277)
T ss_dssp             EEEEEECCTTCBHHHHH-HHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eEEEEEcCCCchHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHcC---CcccccccceEEEcCCCCeEEccchheeEc
Confidence            4899999    666663 34567999999999999999999999998   9999999999999752              


Q ss_pred             --------------CCChhhhhcC------CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccc
Q 040682           65 --------------YMPPEYALRG------FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHE  124 (216)
Q Consensus        65 --------------y~aPE~~~~~------~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (216)
                                    |++||.+.+.      .++.++||||+||++|||++|+.||.......  .    ......+..  
T Consensus       161 ~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~--~----~~~i~~~~~--  232 (277)
T d1phka_         161 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML--M----LRMIMSGNY--  232 (277)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H----HHHHHHTCC--
T ss_pred             cCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHH--H----HHHHHhCCC--
Confidence                          8999998642      46789999999999999999999996543211  1    111111111  


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          125 LIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                          .......+ ..++++.+++.+||+.+|.+|||+.||+++
T Consensus       233 ----~~~~~~~~-~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         233 ----QFGSPEWD-DYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             ----CCCTTTGG-GSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             ----CCCCcccc-cCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence                01111111 256689999999999999999999998754

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.8e-31  Score=211.56  Aligned_cols=143  Identities=18%  Similarity=0.224  Sum_probs=112.4

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .|+||||    +|..+ ....+.+++..++.++.|++.||+|||+++   |+||||||+|||++.+              
T Consensus        80 ~~iv~ey~~gg~L~~~-~~~~~~~~e~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NILl~~~g~vkl~DFG~a~~~  155 (337)
T d1o6la_          80 LCFVMEYANGGELFFH-LSRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             EEEEEECCTTCBHHHH-HHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             cccceeccCCCchhhh-hhcccCCcHHHHHHHHHHHhhhhhhhhhcC---ccccccCHHHeEecCCCCEEEeeccccccc
Confidence            5899999    55554 344457899999999999999999999999   9999999999999762              


Q ss_pred             ---------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           65 ---------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        65 ---------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                     |+|||++.+..++.++||||+||++|||++|+.||.......  ....    .....      ..
T Consensus       156 ~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~--~~~~----i~~~~------~~  223 (337)
T d1o6la_         156 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFEL----ILMEE------IR  223 (337)
T ss_dssp             CCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH----HHHCC------CC
T ss_pred             ccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHH--HHHH----HhcCC------CC
Confidence                           999999999999999999999999999999999987543211  1111    11110      11


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPT-----MSDVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~  166 (216)
                      .+     ...+.++.+|+.+||+.||.+|++     +.|+++
T Consensus       224 ~p-----~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         224 FP-----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             CC-----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CC-----ccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            11     114556899999999999999995     777765

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.3e-30  Score=208.22  Aligned_cols=161  Identities=19%  Similarity=0.183  Sum_probs=112.6

Q ss_pred             eeeeecc---cc-ccc--ccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC-------------
Q 040682            3 KKLVYSK---LL-DAA--NIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l-~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~-------------   63 (216)
                      -||||||   ++ +.+  .......+++.+++.++.|++.||+|||+++   |+||||||+|||++.             
T Consensus        94 ~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~---IiHrDiKp~NILl~~~~~~~kl~DFG~a  170 (350)
T d1q5ka_          94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA  170 (350)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTTCCEEECCCTTC
T ss_pred             EEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCcceEEEecCCCceeEecccch
Confidence            4799999   22 222  2345567999999999999999999999998   999999999999975             


Q ss_pred             ----------------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc--h-------hhhhhhhh
Q 040682           64 ----------------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN--L-------LGHAWDLW  117 (216)
Q Consensus        64 ----------------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~--~-------~~~~~~~~  117 (216)
                                      .|+|||.+.+. .++.++||||+||++|||++|..||.........  .       ....+...
T Consensus       171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~  250 (350)
T d1q5ka_         171 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM  250 (350)
T ss_dssp             EECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred             hhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhh
Confidence                            29999988764 7899999999999999999999999654422110  0       00000000


Q ss_pred             cc----CccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          118 KD----DRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       118 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ..    ............ .......+..+.+|+.+||+.||++|||+.|++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  303 (350)
T d1q5ka_         251 NPNYTEFKFPQIKAHPWT-KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  303 (350)
T ss_dssp             CC---CCCCCCCCCCCGG-GTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccchhhccccccccCchh-hhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00    000000000000 00111145678999999999999999999999863

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=2.7e-30  Score=209.84  Aligned_cols=143  Identities=17%  Similarity=0.179  Sum_probs=111.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .|+||||    +|..+. ...+.+++.+++.++.|++.||.|||+++   ||||||||+|||++.+              
T Consensus       116 ~~~v~e~~~~g~l~~~l-~~~~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHRDIKP~NILl~~~g~ikL~DFG~a~~~  191 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV  191 (350)
T ss_dssp             EEEEEECCTTCBHHHHH-HHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             cccccccccccchhhhH-hhcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCcCCHHHcccCCCCCEEeeeceeeeec
Confidence            4789999    444442 33356999999999999999999999999   9999999999999752              


Q ss_pred             ------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccccc
Q 040682           65 ------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQ  132 (216)
Q Consensus        65 ------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (216)
                                  |+|||++.+..++.++|||||||++|||++|..||......  .....+   . ...      +..+ 
T Consensus       192 ~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~~i---~-~~~------~~~p-  258 (350)
T d1rdqe_         192 KGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--QIYEKI---V-SGK------VRFP-  258 (350)
T ss_dssp             SSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH---H-HCC------CCCC-
T ss_pred             ccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHH--HHHHHH---h-cCC------CCCC-
Confidence                        99999999999999999999999999999999999643211  111111   1 110      1111 


Q ss_pred             chhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 040682          133 DEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVS  166 (216)
Q Consensus       133 ~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~  166 (216)
                          ...+..+.+++.+||+.||.+|+     ++.++++
T Consensus       259 ----~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         259 ----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             ----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             ----ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence                11455789999999999999994     8999886

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1.6e-30  Score=208.47  Aligned_cols=144  Identities=24%  Similarity=0.254  Sum_probs=112.2

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      .|+||||    ++..+ ......+++.+++.++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        79 ~~ivmE~~~gg~l~~~-~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NILl~~~g~vkL~DFG~a~~~  154 (316)
T d1fota_          79 IFMIMDYIEGGELFSL-LRKSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYV  154 (316)
T ss_dssp             EEEEECCCCSCBHHHH-HHHTSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred             eeeEeeecCCcccccc-ccccccccccHHHHHHHHHHHhhhhhccCc---EEccccCchheeEcCCCCEEEecCccceEe
Confidence            5899999    44444 444556899999999999999999999999   999999999999976               


Q ss_pred             -----------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCcccccccccccc
Q 040682           64 -----------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPVITQ  132 (216)
Q Consensus        64 -----------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (216)
                                 .|+|||++.+..++.++||||+||++|||++|+.||.......     .........       ...+ 
T Consensus       155 ~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-----~~~~i~~~~-------~~~p-  221 (316)
T d1fota_         155 PDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK-----TYEKILNAE-------LRFP-  221 (316)
T ss_dssp             SSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-----HHHHHHHCC-------CCCC-
T ss_pred             ccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHH-----HHHHHHcCC-------CCCC-
Confidence                       2999999999999999999999999999999999996432211     111101000       0111 


Q ss_pred             chhhHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 040682          133 DEISLSMLMRYVKVALLCVQETVADRP-----TMSDVVSM  167 (216)
Q Consensus       133 ~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  167 (216)
                          ...+..+.+++.+||+.+|.+|+     ++.+++++
T Consensus       222 ----~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         222 ----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             ----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             ----CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence                11345688999999999999996     89998864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.1e-31  Score=211.72  Aligned_cols=143  Identities=25%  Similarity=0.297  Sum_probs=112.9

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .||||||    +|.++. .....+++.+++.++.|++.||+|||+++   |+||||||+|||++..              
T Consensus        78 ~yivmEy~~~g~L~~~i-~~~~~~~e~~~~~~~~qi~~al~ylH~~~---iiHrDikp~NiL~~~~~~~kl~DFG~a~~~  153 (320)
T d1xjda_          78 LFFVMEYLNGGDLMYHI-QSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKEN  153 (320)
T ss_dssp             EEEEEECCTTCBHHHHH-HHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             eeEEEeecCCCcHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCcccceeecCCCceeccccchhhhc
Confidence            5899999    666653 34456899999999999999999999998   9999999999999762              


Q ss_pred             ---------------CCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccccccc
Q 040682           65 ---------------YMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHELIDPV  129 (216)
Q Consensus        65 ---------------y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (216)
                                     |+|||++.+..++.++||||+||++|||++|+.||.+.....  .    +......      .+.
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~--~----~~~i~~~------~~~  221 (320)
T d1xjda_         154 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--L----FHSIRMD------NPF  221 (320)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H----HHHHHHC------CCC
T ss_pred             ccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHH--H----HHHHHcC------CCC
Confidence                           999999999999999999999999999999999996433211  1    1111111      111


Q ss_pred             cccchhhHHHHHHHHHHHHhccccCCCCCCCHH-HHHH
Q 040682          130 ITQDEISLSMLMRYVKVALLCVQETVADRPTMS-DVVS  166 (216)
Q Consensus       130 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-evl~  166 (216)
                      .+     ...+.++.+++.+||+.||++||++. ++++
T Consensus       222 ~p-----~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         222 YP-----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             CC-----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CC-----ccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            11     11455689999999999999999985 6754

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.96  E-value=1.6e-29  Score=199.91  Aligned_cols=159  Identities=16%  Similarity=0.218  Sum_probs=112.9

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .++||||   .+........+.+++.++..++.|++.||+|||+++   |+||||||+|||++.+               
T Consensus        75 ~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~  151 (286)
T d1ob3a_          75 LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFG  151 (286)
T ss_dssp             EEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred             eeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCc---EEecCCCCceeeEcCCCCEEecccccceecc
Confidence            5789999   333333455677999999999999999999999998   9999999999999762               


Q ss_pred             --------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc----------
Q 040682           65 --------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD----------  119 (216)
Q Consensus        65 --------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~----------  119 (216)
                                    |++||.+.+. .++.++||||+||++|||++|+.||........  ..........          
T Consensus       152 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~  229 (286)
T d1ob3a_         152 IPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ--LMRIFRILGTPNSKNWPNVT  229 (286)
T ss_dssp             C---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTGG
T ss_pred             cCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHH--HHHHHHhhCCCChhhccchh
Confidence                          9999999765 568999999999999999999999965432111  1111100000          


Q ss_pred             --Ccccccccc--ccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          120 --DRVHELIDP--VITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       120 --~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                        .........  ...........+..+.+|+.+||+.||++|||+.|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              000000000  00001111124567899999999999999999999974

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.96  E-value=1.9e-29  Score=200.19  Aligned_cols=157  Identities=15%  Similarity=0.139  Sum_probs=121.1

Q ss_pred             ceeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC---------------
Q 040682            2 CKKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---------------   63 (216)
Q Consensus         2 ~~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~---------------   63 (216)
                      ..|+||||   +|.++.......++..++..++.|++.||+|||+++   |+||||||+|||++.               
T Consensus        75 ~~~~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~g---iiHrDiKp~Nili~~~~~~~~~~vkl~DFG  151 (293)
T d1csna_          75 HNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFG  151 (293)
T ss_dssp             EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             ccEEEEEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCC---ceeccCCccceeecCcccccCCceEEcccc
Confidence            36899999   777775555667999999999999999999999999   999999999999952               


Q ss_pred             --------------------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccch-hhhhhhh
Q 040682           64 --------------------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNL-LGHAWDL  116 (216)
Q Consensus        64 --------------------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~-~~~~~~~  116 (216)
                                                .|+|||.+.+..++.++|||||||++|||++|..||.......... ...... 
T Consensus       152 ~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~-  230 (293)
T d1csna_         152 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE-  230 (293)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHH-
T ss_pred             eeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHh-
Confidence                                      2999999999999999999999999999999999997544433211 111100 


Q ss_pred             hccCccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHccc
Q 040682          117 WKDDRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSMISNE  171 (216)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~L~~~  171 (216)
                        .+ .     .. ........+++++.+++..||..+|++||+...+.+.|+++
T Consensus       231 --~~-~-----~~-~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         231 --KK-Q-----ST-PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             --HH-H-----HS-CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             --cc-C-----CC-ChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence              00 0     00 00001111446789999999999999999999998888765

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2e-29  Score=202.17  Aligned_cols=160  Identities=21%  Similarity=0.244  Sum_probs=112.2

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      -|+||||   .+..........++..+++.++.|++.||+|||+++   |+||||||+|||++.+               
T Consensus        92 ~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~---ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~  168 (318)
T d3blha1          92 IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFS  168 (318)
T ss_dssp             EEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCC---EEecCcCchheeecCCCcEEeeecceeeecc
Confidence            4799999   333333455567899999999999999999999998   9999999999999751               


Q ss_pred             ------------------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhh--------
Q 040682           65 ------------------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLW--------  117 (216)
Q Consensus        65 ------------------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~--------  117 (216)
                                        |+|||++.+. .++.++||||+||++|||++|+.||........  ........        
T Consensus       169 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~  246 (318)
T d3blha1         169 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ--LALISQLCGSITPEVW  246 (318)
T ss_dssp             C-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTS
T ss_pred             cccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHH--HHHHHHhcCCCChhhc
Confidence                              9999998866 689999999999999999999999865432111  11111110        


Q ss_pred             ---ccCccccccccccccc-hh-----hHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          118 ---KDDRVHELIDPVITQD-EI-----SLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       118 ---~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                         ........+....... ..     .......+++|+.+||+.||++|||+.|++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         247 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             TTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence               0000000000000000 00     11124467899999999999999999999864

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.4e-29  Score=205.37  Aligned_cols=162  Identities=21%  Similarity=0.213  Sum_probs=114.6

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      .||||||   +|..+.  +.+.+++..++.++.|++.||+|||+++   |+||||||+|||++.+               
T Consensus        98 ~~lv~e~~~~~l~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~---IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~  172 (346)
T d1cm8a_          98 FYLVMPFMGTDLGKLM--KHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQAD  172 (346)
T ss_dssp             CEEEEECCSEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEecccccHHHHH--HhccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCcchhhcccccccccccccceeccC
Confidence            4899999   555542  3346999999999999999999999999   9999999999999762               


Q ss_pred             -----------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccch-h--------hhhhhhhcc----
Q 040682           65 -----------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNL-L--------GHAWDLWKD----  119 (216)
Q Consensus        65 -----------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~-~--------~~~~~~~~~----  119 (216)
                                 |+|||++.+. .++.++||||+||++|+|++|..||.......... .        ...+.....    
T Consensus       173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (346)
T d1cm8a_         173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK  252 (346)
T ss_dssp             SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred             CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhh
Confidence                       9999998875 57899999999999999999999986553221100 0        000000000    


Q ss_pred             ---CccccccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--Hccc
Q 040682          120 ---DRVHELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM--ISNE  171 (216)
Q Consensus       120 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--L~~~  171 (216)
                         ....+......  ..........+.+|+.+||+.||++|||+.|++++  |+.+
T Consensus       253 ~~~~~~~~~~~~~~--~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         253 NYMKGLPELEKKDF--ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             HHHHHSCCCCCCCG--GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             hhhccCCcccccch--HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence               00000000000  00111134567899999999999999999999975  5554

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.95  E-value=1.3e-28  Score=198.23  Aligned_cols=160  Identities=16%  Similarity=0.188  Sum_probs=112.5

Q ss_pred             eeeeecc-cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC------------------
Q 040682            3 KKLVYSK-LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS------------------   63 (216)
Q Consensus         3 ~~lV~Ey-~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~------------------   63 (216)
                      .++|||| ...++.. ..+.+++.+++.++.||+.||+|||+++   |+||||||+|||++.                  
T Consensus       107 ~~~v~e~~~~~~L~~-~~~~l~e~~i~~i~~qil~aL~~LH~~g---IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~  182 (328)
T d3bqca1         107 PALVFEHVNNTDFKQ-LYQTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  182 (328)
T ss_dssp             EEEEEECCCSCBGGG-TTTSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCGGGCEECCT
T ss_pred             eeEEEeecCCCcHHH-HhcCCCHHHHHHHHHHHHHHHHHHhhcc---cccccccccceEEcCCCCeeeecccccceeccC
Confidence            5889999 4444422 2346999999999999999999999999   999999999999974                  


Q ss_pred             -----------CCCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhh--------hhhhhc---cC
Q 040682           64 -----------GYMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGH--------AWDLWK---DD  120 (216)
Q Consensus        64 -----------~y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~--------~~~~~~---~~  120 (216)
                                 .|+|||.+.+. .++.++||||+||+++|+++|..||.............        ......   ..
T Consensus       183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~  262 (328)
T d3bqca1         183 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE  262 (328)
T ss_dssp             TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred             CCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccc
Confidence                       19999998876 57999999999999999999999987554322100000        000000   00


Q ss_pred             ---ccccccc-------cccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          121 ---RVHELID-------PVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       121 ---~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                         .......       ............+.++.+|+.+||+.||++|||++|+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence               0000000       000111111224567899999999999999999999976

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2e-28  Score=199.23  Aligned_cols=159  Identities=22%  Similarity=0.183  Sum_probs=113.9

Q ss_pred             eeeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecC----------------
Q 040682            3 KKLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----------------   63 (216)
Q Consensus         3 ~~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~----------------   63 (216)
                      .|+||||   .+....   .+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.                
T Consensus        97 ~~iv~Ey~~~~l~~~~---~~~~~~~~i~~~~~qil~gl~~LH~~g---iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~  170 (355)
T d2b1pa1          97 VYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_dssp             EEEEEECCSEEHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             eEEEEeccchHHHHhh---hcCCCHHHHHHHHHHHHHHHHHhhhcc---cccccCCccccccccccceeeechhhhhccc
Confidence            4899999   222221   345899999999999999999999999   999999999999986                


Q ss_pred             ------------CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc-----------------hhhhhh
Q 040682           64 ------------GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN-----------------LLGHAW  114 (216)
Q Consensus        64 ------------~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~-----------------~~~~~~  114 (216)
                                  .|+|||++.+..++.++||||+||++++|++|+.||.+.......                 ......
T Consensus       171 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (355)
T d2b1pa1         171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR  250 (355)
T ss_dssp             ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred             cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHH
Confidence                        299999999999999999999999999999999998654321110                 000000


Q ss_pred             hhhccC------cccccccccc--ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          115 DLWKDD------RVHELIDPVI--TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       115 ~~~~~~------~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ......      .....+....  .........+..+.+|+.+||+.||++|||++||+++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            000000      0000110000  0112233367789999999999999999999999854

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.2e-28  Score=197.24  Aligned_cols=159  Identities=19%  Similarity=0.160  Sum_probs=108.4

Q ss_pred             eeeecc---cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC----------------
Q 040682            4 KLVYSK---LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG----------------   64 (216)
Q Consensus         4 ~lV~Ey---~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~----------------   64 (216)
                      +||+|+   +|.++..  .+.+++..++.++.|++.||+|||+++   |+||||||+|||++..                
T Consensus        87 ~l~~~~~~g~L~~~l~--~~~l~~~~i~~i~~qil~al~yLH~~~---iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~  161 (345)
T d1pmea_          87 YLVTHLMGADLYKLLK--TQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP  161 (345)
T ss_dssp             EEEEECCCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             EEEEeecCCchhhhhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence            444444   6666633  246999999999999999999999998   9999999999999762                


Q ss_pred             ----------------CCChhhhh-cCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccc-hhhhhhhhhccCc-----
Q 040682           65 ----------------YMPPEYAL-RGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFN-LLGHAWDLWKDDR-----  121 (216)
Q Consensus        65 ----------------y~aPE~~~-~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~-~~~~~~~~~~~~~-----  121 (216)
                                      |+|||++. +..++.++||||+||++++|++|+.||......... .............     
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (345)
T d1pmea_         162 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII  241 (345)
T ss_dssp             GGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCC
T ss_pred             CCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhh
Confidence                            99999985 456789999999999999999999998654321110 0000000000000     


Q ss_pred             ---cccc--cccccccchh---hHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          122 ---VHEL--IDPVITQDEI---SLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       122 ---~~~~--~~~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                         ....  ..+.......   ......++.+++.+||+.||.+|||+.|++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         242 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence               0000  0000000000   00134568899999999999999999999865

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.8e-28  Score=192.24  Aligned_cols=160  Identities=17%  Similarity=0.221  Sum_probs=111.6

Q ss_pred             eeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC--------------
Q 040682            3 KKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG--------------   64 (216)
Q Consensus         3 ~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~--------------   64 (216)
                      .++|+||    ++..+ ....+.+++..+..++.|++.||+|||+++   |+||||||+|||++..              
T Consensus        76 ~~iv~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~---IvHrDiKP~NIli~~~~~~kl~DFG~a~~~  151 (292)
T d1unla_          76 LTLVFEFCDQDLKKYF-DSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAF  151 (292)
T ss_dssp             EEEEEECCSEEHHHHH-HHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eeEEeeeccccccccc-cccccccchhHHHHHHHHHHHHHHHhhcCC---EeeecccCcccccccCCceeeeecchhhcc
Confidence            4788888    33333 345567899999999999999999999998   9999999999999752              


Q ss_pred             ---------------CCChhhhhcCC-CCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhcc---Ccc---
Q 040682           65 ---------------YMPPEYALRGF-FSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKD---DRV---  122 (216)
Q Consensus        65 ---------------y~aPE~~~~~~-~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~---  122 (216)
                                     |.+||.+.+.. ++.++||||+||++|||++|..||......... ..........   ...   
T Consensus       152 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  230 (292)
T d1unla_         152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ-LKRIFRLLGTPTEEQWPSM  230 (292)
T ss_dssp             CSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH-HHHHHHHHCCCCTTTCTTG
T ss_pred             cCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHH-HHHHHhhcCCCChhhhhhh
Confidence                           88999888764 689999999999999999999997544332211 1111100000   000   


Q ss_pred             ---c-----cccccccccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          123 ---H-----ELIDPVITQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       123 ---~-----~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                         .     .................+.+.+|+.+||+.||.+|||+.||+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence               0     00000000111111245678899999999999999999998763

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.7e-28  Score=196.91  Aligned_cols=156  Identities=22%  Similarity=0.267  Sum_probs=109.8

Q ss_pred             eeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC---------------
Q 040682            4 KLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG---------------   64 (216)
Q Consensus         4 ~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~---------------   64 (216)
                      ++|+||    +|.++.  ..+.+++.+++.++.|++.||+|||+++   |+||||||+|||++.+               
T Consensus        98 ~~i~~~~~gg~L~~~~--~~~~l~e~~~~~i~~qil~aL~~LH~~g---iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~  172 (348)
T d2gfsa1          98 VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD  172 (348)
T ss_dssp             CEEEEECCSEEHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCC----CCT
T ss_pred             EEEEEeecCCchhhhc--ccccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCCccccccccccccccccchhcccC
Confidence            455566    666664  3346999999999999999999999999   9999999999999762               


Q ss_pred             -----------CCChhhhhcC-CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccC--cc--------
Q 040682           65 -----------YMPPEYALRG-FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDD--RV--------  122 (216)
Q Consensus        65 -----------y~aPE~~~~~-~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------  122 (216)
                                 |+|||...+. .++.++||||+||++|+|++|+.||.+......  ...+.......  ..        
T Consensus       173 ~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~  250 (348)
T d2gfsa1         173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ--LKLILRLVGTPGAELLKKISSES  250 (348)
T ss_dssp             GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCHHHHTTCCCHH
T ss_pred             cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCChHHhhhccchh
Confidence                       9999988776 468899999999999999999999975432211  00000000000  00        


Q ss_pred             -ccccc--cccccc---hhhHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 040682          123 -HELID--PVITQD---EISLSMLMRYVKVALLCVQETVADRPTMSDVVS  166 (216)
Q Consensus       123 -~~~~~--~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  166 (216)
                       .....  ......   .........+.+|+.+||+.||++|||+.|+++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         251 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             HHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence             00000  000000   001113566889999999999999999999986

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2e-27  Score=190.73  Aligned_cols=148  Identities=23%  Similarity=0.237  Sum_probs=110.3

Q ss_pred             ceeeeecc----cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC-------------
Q 040682            2 CKKLVYSK----LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG-------------   64 (216)
Q Consensus         2 ~~~lV~Ey----~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~-------------   64 (216)
                      ..++||||    +|.++. ...+.+++..+..++.|++.||+|||+++   |+||||||+|||++.+             
T Consensus       103 ~~~~v~e~~~~~~L~~~i-~~~~~~~e~~~~~~~~Qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~vkL~DFG~a~~  178 (322)
T d1vzoa_         103 KLHLILDYINGGELFTHL-SQRERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE  178 (322)
T ss_dssp             EEEEEECCCCSCBHHHHH-HHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred             ceeeeeecccccHHHHHH-HhcccccHHHHHHHHHHHHHHHHHhhcCC---EEeccCCccceeecCCCCEEEeeccchhh
Confidence            35889999    555552 33345789999999999999999999999   9999999999999862             


Q ss_pred             -----------------CCChhhhhcC--CCCcchhhhhHHHHHHHHHhCCCCCCcCCCCccchhhhhhhhhccCccccc
Q 040682           65 -----------------YMPPEYALRG--FFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSFNLLGHAWDLWKDDRVHEL  125 (216)
Q Consensus        65 -----------------y~aPE~~~~~--~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (216)
                                       |++||.+.+.  .++.++||||+||++|+|++|..||.........  ..........     
T Consensus       179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~--~~i~~~~~~~-----  251 (322)
T d1vzoa_         179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ--AEISRRILKS-----  251 (322)
T ss_dssp             CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH--HHHHHHHHHC-----
T ss_pred             hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHhcccC-----
Confidence                             9999999765  4678999999999999999999999765444321  1111100000     


Q ss_pred             cccccccchhhHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 040682          126 IDPVITQDEISLSMLMRYVKVALLCVQETVADRPT-----MSDVVS  166 (216)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~  166 (216)
                       .+..     +...+.++.+++.+||+++|++|||     +.|+++
T Consensus       252 -~~~~-----~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         252 -EPPY-----PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             -CCCC-----CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             -CCCC-----cccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence             0111     1125667999999999999999995     677775

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.4e-26  Score=188.33  Aligned_cols=150  Identities=19%  Similarity=0.273  Sum_probs=105.1

Q ss_pred             ccCCCCCCChHHHHHHHHHHHHHHHhhhc-CCCCCeecCCCCCCceeecC------------------------------
Q 040682           15 NIDKKRLLDWQVRARIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDS------------------------------   63 (216)
Q Consensus        15 ~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dik~~nil~~~------------------------------   63 (216)
                      .......+++..++.++.|++.||+|||+ .+   |+||||||+|||++.                              
T Consensus       115 ~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~---IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~g  191 (362)
T d1q8ya_         115 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ  191 (362)
T ss_dssp             HHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCS
T ss_pred             ccccccCCcHHHHHHHHHHHHHHHHHHhhhcC---cccccCChhHeeeeccCcccccceeeEeecccccccccccccccc
Confidence            44556678999999999999999999998 77   999999999999963                              


Q ss_pred             --CCCChhhhhcCCCCcchhhhhHHHHHHHHHhCCCCCCcCCCCcc-c---hhhhhhhh------------------hcc
Q 040682           64 --GYMPPEYALRGFFSIKSDVFSFGVLMLEILSGKKSTAVYNTGSF-N---LLGHAWDL------------------WKD  119 (216)
Q Consensus        64 --~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell~g~~~~~~~~~~~~-~---~~~~~~~~------------------~~~  119 (216)
                        .|+|||++.+..++.++||||+||++++|++|+.||........ .   ........                  ...
T Consensus       192 t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  271 (362)
T d1q8ya_         192 TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNS  271 (362)
T ss_dssp             CGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC
T ss_pred             cccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhccccccccccc
Confidence              29999999999999999999999999999999999875543221 0   00000000                  000


Q ss_pred             Ccccccccccc---------ccchhhHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 040682          120 DRVHELIDPVI---------TQDEISLSMLMRYVKVALLCVQETVADRPTMSDVVSM  167 (216)
Q Consensus       120 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  167 (216)
                      ......+....         .........+..+.+|+.+||+.||.+|||++|++++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         272 RGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             --CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             chhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            00000000000         0111223467889999999999999999999999764

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.10  E-value=1.7e-11  Score=89.75  Aligned_cols=53  Identities=13%  Similarity=0.172  Sum_probs=42.1

Q ss_pred             eeeecc-cccccccCCCCCCChHHHHHHHHHHHHHHHhhhcCCCCCeecCCCCCCceeecCC
Q 040682            4 KLVYSK-LLDAANIDKKRLLDWQVRARIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSG   64 (216)
Q Consensus         4 ~lV~Ey-~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dik~~nil~~~~   64 (216)
                      ++|||| .-...     ..++......++.|++.||+|||+++   |+||||||+|||++.+
T Consensus        86 ~lvme~~~~~~~-----~~l~~~~~~~i~~ql~~~l~~lH~~g---iiHrDiKP~NILv~~~  139 (191)
T d1zara2          86 AVLMELIDAKEL-----YRVRVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVSEE  139 (191)
T ss_dssp             EEEEECCCCEEG-----GGCCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEETT
T ss_pred             EEEEEeeccccc-----cchhhHHHHHHHHHHHHHHHHHhhCC---EEEccCChhheeeeCC
Confidence            578888 22221     22456667789999999999999999   9999999999999863