BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040687
(740 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 159/304 (52%), Gaps = 34/304 (11%)
Query: 461 PASACP----GMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANA 516
PA P G + F L EL+ A++ F N LGRG +G VYK L DG VAVKR
Sbjct: 5 PAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKE 64
Query: 517 ATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG--- 573
+ +F+ E+E++ H N++ L G+C+ ERLLVY +M G++ L
Sbjct: 65 ERTQGGEL-QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE 123
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
PL+W R +I++ +A+GL YLH P IIHRDVK NILLD ++ A + DFGL
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
Query: 634 CE-RDL---------------------TTDMKSDVHNFGIVLLEILSGRKAYDIEYVPPG 671
+ +D + K+DV +G++LLE+++G++A+D+ +
Sbjct: 184 MDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND 243
Query: 672 ----IVEWALPLIKQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVA 727
+++W L+K+ K A++D ++ E + +L +A L + +P E P MS+V
Sbjct: 244 DDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303
Query: 728 TWLE 731
LE
Sbjct: 304 RMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 159/304 (52%), Gaps = 34/304 (11%)
Query: 461 PASACP----GMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANA 516
PA P G + F L EL+ A++ F N LGRG +G VYK L DG VAVKR
Sbjct: 13 PAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKE 72
Query: 517 ATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG--- 573
+ +F+ E+E++ H N++ L G+C+ ERLLVY +M G++ L
Sbjct: 73 ERXQGGEL-QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE 131
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
PL+W R +I++ +A+GL YLH P IIHRDVK NILLD ++ A + DFGL
Sbjct: 132 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 191
Query: 634 CE-RDL---------------------TTDMKSDVHNFGIVLLEILSGRKAYDIEYVPPG 671
+ +D + K+DV +G++LLE+++G++A+D+ +
Sbjct: 192 MDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND 251
Query: 672 ----IVEWALPLIKQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVA 727
+++W L+K+ K A++D ++ E + +L +A L + +P E P MS+V
Sbjct: 252 DDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 311
Query: 728 TWLE 731
LE
Sbjct: 312 RMLE 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 164/319 (51%), Gaps = 36/319 (11%)
Query: 446 KHELDTDAIADSLPHPASACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVD 505
K+ T++I D+L + P + L +L++ATN F +G G +G VYK VL D
Sbjct: 4 KYSKATNSINDALS-SSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62
Query: 506 GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRG 565
G +VA+KR + E E+E C RH ++V+L+G+C E E +L+Y++M G
Sbjct: 63 GAKVALKRRTPESSQGIEEFETEIETLSFC--RHPHLVSLIGFCDERNEMILIYKYMENG 120
Query: 566 TLHDHLHGGLSP---LNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWG 622
L HL+G P ++W RL+I + AA+GL YLH A IIHRDVK++NILLD ++
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFV 177
Query: 623 ARIADFGLLTS-CERDLT----------------------TDMKSDVHNFGIVLLEILSG 659
+I DFG+ E D T KSDV++FG+VL E+L
Sbjct: 178 PKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237
Query: 660 RKAYDIEYVPPGIV---EWALPLIKQGKAAAIIDRNVALPRNVEPLFKLADIAELAIREN 716
R A ++ +P +V EWA+ G+ I+D N+A E L K D A + +
Sbjct: 238 RSAI-VQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALS 296
Query: 717 PSELPTMSQVATWLEQIVK 735
+ P+M V LE ++
Sbjct: 297 SEDRPSMGDVLWKLEYALR 315
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 163/319 (51%), Gaps = 36/319 (11%)
Query: 446 KHELDTDAIADSLPHPASACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVD 505
K+ T++I D+L + P + L +L++ATN F +G G +G VYK VL D
Sbjct: 4 KYSKATNSINDALS-SSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62
Query: 506 GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRG 565
G +VA+KR + E E+E C RH ++V+L+G+C E E +L+Y++M G
Sbjct: 63 GAKVALKRRTPESSQGIEEFETEIETLSFC--RHPHLVSLIGFCDERNEMILIYKYMENG 120
Query: 566 TLHDHLHGGLSP---LNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWG 622
L HL+G P ++W RL+I + AA+GL YLH A IIHRDVK++NILLD ++
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFV 177
Query: 623 ARIADFGLLTSCERDLTTDM-----------------------KSDVHNFGIVLLEILSG 659
+I DFG+ T + KSDV++FG+VL E+L
Sbjct: 178 PKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237
Query: 660 RKAYDIEYVPPGIV---EWALPLIKQGKAAAIIDRNVALPRNVEPLFKLADIAELAIREN 716
R A ++ +P +V EWA+ G+ I+D N+A E L K D A + +
Sbjct: 238 RSAI-VQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALS 296
Query: 717 PSELPTMSQVATWLEQIVK 735
+ P+M V LE ++
Sbjct: 297 SEDRPSMGDVLWKLEYALR 315
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 44/299 (14%)
Query: 472 FRLSELKDATNGFKEF------NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN-- 523
F ELK+ TN F E N++G G +G VYK V+ VAVK+ A I T
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWS 581
++F+ E++V+ +H N+V LLG+ + + LVY +MP G+L D L G PL+W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 582 LRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD 641
+R KI+ AA G+ +LH++ IHRD+K+ NILLD + A+I+DFGL + E+ T
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 642 M----------------------KSDVHNFGIVLLEILSGRKAYDIEYVPPGIV--EWAL 677
M KSD+++FG+VLLEI++G A D E+ P ++
Sbjct: 191 MXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLLDIKEE 249
Query: 678 PLIKQGKAAAIIDR--NVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
++ ID+ N A +VE ++ +A + E ++ P + +V L+++
Sbjct: 250 IEDEEKTIEDYIDKKMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLLQEMT 305
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 155/298 (52%), Gaps = 44/298 (14%)
Query: 472 FRLSELKDATNGFKEF------NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN-- 523
F ELK+ TN F E N++G G +G VYK V+ VAVK+ A I T
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWS 581
++F+ E++V+ +H N+V LLG+ + + LVY +MP G+L D L G PL+W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 582 LRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD 641
+R KI+ AA G+ +LH++ IHRD+K+ NILLD + A+I+DFGL + E+ T
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 642 M----------------------KSDVHNFGIVLLEILSGRKAYDIEYVPPGIV--EWAL 677
M KSD+++FG+VLLEI++G A D E+ P ++
Sbjct: 191 MXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLLDIKEE 249
Query: 678 PLIKQGKAAAIIDR--NVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQI 733
++ ID+ N A +VE ++ +A + E ++ P + +V L+++
Sbjct: 250 IEDEEKTIEDYIDKKMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 154/298 (51%), Gaps = 44/298 (14%)
Query: 472 FRLSELKDATNGFKEF------NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN-- 523
F ELK+ TN F E N++G G +G VYK V+ VAVK+ A I T
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 67
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWS 581
++F+ E++V+ +H N+V LLG+ + + LVY +MP G+L D L G PL+W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 582 LRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD 641
+R KI+ AA G+ +LH++ IHRD+K+ NILLD + A+I+DFGL + E+
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 642 M----------------------KSDVHNFGIVLLEILSGRKAYDIEYVPPGIV--EWAL 677
M KSD+++FG+VLLEI++G A D E+ P ++
Sbjct: 185 MXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLLDIKEE 243
Query: 678 PLIKQGKAAAIIDR--NVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQI 733
++ ID+ N A +VE ++ +A + E ++ P + +V L+++
Sbjct: 244 IEDEEKTIEDYIDKKMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 126/236 (53%), Gaps = 41/236 (17%)
Query: 472 FRLSELKDATNGFKEF------NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN-- 523
F ELK+ TN F E N+ G G +G VYK V+ VAVK+ A I T
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWS 581
++F+ E++V +H N+V LLG+ + + LVY + P G+L D L G PL+W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 582 LRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER----- 636
R KI+ AA G+ +LH++ IHRD+K+ NILLD + A+I+DFGL + E+
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 637 -------------------DLTTDMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIV 673
++T KSD+++FG+VLLEI++G A D E+ P ++
Sbjct: 182 XXSRIVGTTAYXAPEALRGEITP--KSDIYSFGVVLLEIITGLPAVD-EHREPQLL 234
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 38/273 (13%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
++G GS+G V++A G VAVK + EF E+ ++ +RH NIV +G
Sbjct: 44 KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 549 CLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ +V E++ RG+L+ LH G L+ RL ++ AKG+ YLH + PPI+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIV 161
Query: 607 HRDVKTLNILLDSDWGARIADFGL---------------------LTSCERDLTTDMKSD 645
HRD+K+ N+L+D + ++ DFGL RD ++ KSD
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSD 221
Query: 646 VHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFKL 705
V++FG++L E+ + ++ + P +V A + + +PRN+ P ++
Sbjct: 222 VYSFGVILWELATLQQPWG-NLNPAQVV----------AAVGFKCKRLEIPRNLNP--QV 268
Query: 706 ADIAELAIRENPSELPTMSQVATWLEQIVKDGL 738
A I E P + P+ + + L ++K +
Sbjct: 269 AAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 38/273 (13%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
++G GS+G V++A G VAVK + EF E+ ++ +RH NIV +G
Sbjct: 44 KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 549 CLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ +V E++ RG+L+ LH G L+ RL ++ AKG+ YLH + PPI+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIV 161
Query: 607 HRDVKTLNILLDSDWGARIADFGL--------LTSCE-------------RDLTTDMKSD 645
HR++K+ N+L+D + ++ DFGL L+S RD ++ KSD
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSD 221
Query: 646 VHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFKL 705
V++FG++L E+ + ++ + P +V A + + +PRN+ P ++
Sbjct: 222 VYSFGVILWELATLQQPWG-NLNPAQVV----------AAVGFKCKRLEIPRNLNP--QV 268
Query: 706 ADIAELAIRENPSELPTMSQVATWLEQIVKDGL 738
A I E P + P+ + + L ++K +
Sbjct: 269 AAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 49/293 (16%)
Query: 473 RLSELKDATNGFKEFNELGRGSYGFVYKAVLV-DGRQVAVKR-----ANAATIIHTNIRE 526
RL L D N + ++G+G +G V+K LV D VA+K + T + +E
Sbjct: 12 RLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 527 FEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKI 586
F+ E+ ++ N+ H NIV L Y L +V EF+P G L+ L P+ WS++L++
Sbjct: 70 FQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS-DWG----ARIADFGL----------- 630
+ A G+EY+ ++ PPI+HRD+++ NI L S D A++ADFGL
Sbjct: 128 MLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL 186
Query: 631 ----------LTSCERDLTTDMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLI 680
E + T+ K+D ++F ++L IL+G +D EY G +++ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTE-KADTYSFAMILYTILTGEGPFD-EYS-YGKIKFINMIR 243
Query: 681 KQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQI 733
++G I P + P +L ++ EL +P + P S + L ++
Sbjct: 244 EEGLRPTI-------PEDCPP--RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 49/293 (16%)
Query: 473 RLSELKDATNGFKEFNELGRGSYGFVYKAVLV-DGRQVAVKR-----ANAATIIHTNIRE 526
RL L D N + ++G+G +G V+K LV D VA+K + T + +E
Sbjct: 12 RLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 527 FEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKI 586
F+ E+ ++ N+ H NIV L Y L +V EF+P G L+ L P+ WS++L++
Sbjct: 70 FQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS-DWG----ARIADF-----------GL 630
+ A G+EY+ ++ PPI+HRD+++ NI L S D A++ADF GL
Sbjct: 128 MLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGL 186
Query: 631 L----------TSCERDLTTDMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLI 680
L E + T+ K+D ++F ++L IL+G +D EY G +++ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTE-KADTYSFAMILYTILTGEGPFD-EYS-YGKIKFINMIR 243
Query: 681 KQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQI 733
++G I P + P +L ++ EL +P + P S + L ++
Sbjct: 244 EEGLRPTI-------PEDCPP--RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 49/293 (16%)
Query: 473 RLSELKDATNGFKEFNELGRGSYGFVYKAVLV-DGRQVAVKR-----ANAATIIHTNIRE 526
RL L D N + ++G+G +G V+K LV D VA+K + T + +E
Sbjct: 12 RLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 527 FEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKI 586
F+ E+ ++ N+ H NIV L Y L +V EF+P G L+ L P+ WS++L++
Sbjct: 70 FQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS-DWG----ARIADFGL----------- 630
+ A G+EY+ ++ PPI+HRD+++ NI L S D A++ADFG
Sbjct: 128 MLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGL 186
Query: 631 ----------LTSCERDLTTDMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLI 680
E + T+ K+D ++F ++L IL+G +D EY G +++ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTE-KADTYSFAMILYTILTGEGPFD-EYS-YGKIKFINMIR 243
Query: 681 KQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQI 733
++G I P + P +L ++ EL +P + P S + L ++
Sbjct: 244 EEGLRPTI-------PEDCPP--RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 119/264 (45%), Gaps = 45/264 (17%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G GS+G VYK VAVK N ++ F+ E+ VL RH NI+ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + + +V ++ +L+ HLH + + I+ Q A+G++YLH A IIH
Sbjct: 88 YSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCER--------DLTTDM----------------- 642
RD+K+ NI L D +I DFGL T R L+ +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 643 -KSDVHNFGIVLLEILSGRKAYD--------IEYVPPGIVEWALPLIKQG---KAAAIID 690
+SDV+ FGIVL E+++G+ Y IE V G + L ++ + ++
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 691 RNVALPRNVEPLFK--LADIAELA 712
+ R+ P F LA+I ELA
Sbjct: 264 ECLKKKRDERPSFPRILAEIEELA 287
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 118/264 (44%), Gaps = 45/264 (17%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G GS+G VYK VAVK N ++ F+ E+ VL RH NI+ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + +V ++ +L+ HLH + + I+ Q A+G++YLH A IIH
Sbjct: 88 YST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCER--------DLTTDM----------------- 642
RD+K+ NI L D +I DFGL T R L+ +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 643 -KSDVHNFGIVLLEILSGRKAYD--------IEYVPPGIVEWALPLIKQG---KAAAIID 690
+SDV+ FGIVL E+++G+ Y IE V G + L ++ + ++
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 691 RNVALPRNVEPLFK--LADIAELA 712
+ R+ P F LA+I ELA
Sbjct: 264 ECLKKKRDERPSFPRILAEIEELA 287
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 119/264 (45%), Gaps = 45/264 (17%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G GS+G VYK VAVK N ++ F+ E+ VL RH NI+ +G
Sbjct: 18 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + + +V ++ +L+ HLH + + I+ Q A+G++YLH A IIH
Sbjct: 76 YSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 131
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCER--------DLTTDM----------------- 642
RD+K+ NI L D +I DFGL T R L+ +
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 643 -KSDVHNFGIVLLEILSGRKAYD--------IEYVPPGIVEWALPLIKQG---KAAAIID 690
+SDV+ FGIVL E+++G+ Y IE V G + L ++ + ++
Sbjct: 192 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 251
Query: 691 RNVALPRNVEPLFK--LADIAELA 712
+ R+ P F LA+I ELA
Sbjct: 252 ECLKKKRDERPSFPRILAEIEELA 275
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 108/219 (49%), Gaps = 40/219 (18%)
Query: 475 SELKDATN----GFKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIR 525
SE +D T K +LG+G++G V Y + + G VAVK+ +T H +R
Sbjct: 2 SEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LR 59
Query: 526 EFEMELEVLCNIRHSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
+FE E+E+L +++H NIV G C G R L+ E++P G+L D+L ++
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 119
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
L+ + Q KG+EYL IHRD+ T NIL++++ +I DFGL +D
Sbjct: 120 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 640 ----------------TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 72
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEY 132
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 76
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 136
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 137 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 193
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 100
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 160
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 161 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 217
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 69
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 75
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 135
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 136 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 192
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 193 ESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 74
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 134
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 135 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 191
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 192 ESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 68
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 128
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 129 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 185
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 69
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP 186
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 67
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 127
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 128 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 184
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 185 ESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 87
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 73
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 133
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 134 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 190
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 191 ESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 69
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 87
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 72
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ EF+P G+L ++L ++ L+ + Q KG+EY
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHRD+ T NIL++++ +I DFGL +D
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K +LG+G++G V Y + + G VAVK+ +T H +R+FE E+E+L +++
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQ 70
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV G C G R L+ E++P G+L D+L ++ L+ + Q KG+EY
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 130
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT----------------- 639
L IHR++ T NIL++++ +I DFGL +D
Sbjct: 131 L---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 640 ---TDMK----SDVHNFGIVLLEILS 658
T+ K SDV +FG+VL E+ +
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G GS+G VYK VAVK N ++ F+ E+ VL RH NI+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + + +V ++ +L+ HLH + + I+ Q A+G++YLH A IIH
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCER--------DLTTDM----------------- 642
RD+K+ NI L D +I DFGL T R L+ +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 643 -KSDVHNFGIVLLEILSGRKAY 663
+SDV+ FGIVL E+++G+ Y
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPY 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G GS+G VYK VAVK N ++ F+ E+ VL RH NI+ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + + +V ++ +L+ HLH + + I+ Q A+G++YLH A IIH
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 132
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCER--------DLTTDM----------------- 642
RD+K+ NI L D +I DFGL T R L+ +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 643 -KSDVHNFGIVLLEILSGRKAY 663
+SDV+ FGIVL E+++G+ Y
Sbjct: 193 FQSDVYAFGIVLYELMTGQLPY 214
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G GS+G VYK VAVK N ++ F+ E+ VL RH NI+ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + + +V ++ +L+ HLH + + I+ Q A+G++YLH A IIH
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 155
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCER--------DLTTDM----------------- 642
RD+K+ NI L D +I DFGL T R L+ +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 643 -KSDVHNFGIVLLEILSGRKAY 663
+SDV+ FGIVL E+++G+ Y
Sbjct: 216 FQSDVYAFGIVLYELMTGQLPY 237
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G GS+G VYK VAVK N ++ F+ E+ VL RH NI+ +G
Sbjct: 34 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + + +V ++ +L+ HLH + + I+ Q A+G++YLH A IIH
Sbjct: 92 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 147
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCER--------DLTTDM----------------- 642
RD+K+ NI L D +I DFGL T R L+ +
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 207
Query: 643 -KSDVHNFGIVLLEILSGRKAY 663
+SDV+ FGIVL E+++G+ Y
Sbjct: 208 FQSDVYAFGIVLYELMTGQLPY 229
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G GS+G VYK VAVK N ++ F+ E+ VL RH NI+ +G
Sbjct: 16 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + + +V ++ +L+ HLH + + I+ Q A+G++YLH A IIH
Sbjct: 74 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 129
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCER--------DLTTDM----------------- 642
RD+K+ NI L D +I DFGL T R L+ +
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 189
Query: 643 -KSDVHNFGIVLLEILSGRKAY 663
+SDV+ FGIVL E+++G+ Y
Sbjct: 190 FQSDVYAFGIVLYELMTGQLPY 211
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 99/209 (47%), Gaps = 44/209 (21%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVK--RANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G G +G VY+A + G +VAVK R + I I E ++ ++H NI+ L G
Sbjct: 15 IGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSP----LNWSLRLKISMQAAKGLEYLHKDAAP 603
CL+ LV EF G L+ L G P +NW++ Q A+G+ YLH +A
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAV------QIARGMNYLHDEAIV 127
Query: 604 PIIHRDVKTLNILL--------DSDWGARIADFGLLTSCERDLTTDMK------------ 643
PIIHRD+K+ NIL+ S+ +I DFGL R TT M
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR--TTKMSAAGAYAWMAPEV 185
Query: 644 ---------SDVHNFGIVLLEILSGRKAY 663
SDV ++G++L E+L+G +
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G GS+G VYK VAVK N ++ F+ E+ VL RH NI+ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + + +V ++ +L+ HLH + + I+ Q A+G++YLH A IIH
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 132
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCER--------DLTTDM----------------- 642
RD+K+ NI L D +I DFGL T R L+ +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 643 -KSDVHNFGIVLLEILSGRKAY 663
+SDV+ FGIVL E+++G+ Y
Sbjct: 193 FQSDVYAFGIVLYELMTGQLPY 214
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 93/202 (46%), Gaps = 32/202 (15%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G GS+G VYK VAVK N ++ F+ E+ VL RH NI+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + + +V ++ +L+ HLH + + I+ Q A+G++YLH A IIH
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCER--------------------------DLTTD 641
RD+K+ NI L D +I DFGL T R
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 642 MKSDVHNFGIVLLEILSGRKAY 663
+SDV+ FGIVL E+++G+ Y
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPY 209
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 125/268 (46%), Gaps = 42/268 (15%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
+GRG++G V KA + VA+K+ + + + F +EL L + H NIV L G C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 550 LEMGERLLVYEFMPRGTLHDHLHGGLSPLNW---SLRLKISMQAAKGLEYLHKDAAPPII 606
L LV E+ G+L++ LHG PL + + + +Q ++G+ YLH +I
Sbjct: 72 L--NPVCLVMEYAEGGSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 607 HRDVKTLNILLDSDWGA-RIADFGLLTSCERDLTTDM------------------KSDVH 647
HRD+K N+LL + +I DFG + +T + K DV
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVF 188
Query: 648 NFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFKLAD 707
++GI+L E+++ RK +D P + WA + G +I LP+ +E L
Sbjct: 189 SWGIILWEVITRRKPFDEIGGPAFRIMWA---VHNGTRPPLIKN---LPKPIESLMT--- 239
Query: 708 IAELAIRENPSELPTMSQVATWLEQIVK 735
++PS+ P+M ++ + +++
Sbjct: 240 ---RCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G GS+G VYK VAVK N ++ F+ E+ VL RH NI+ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + + +V ++ +L+ HLH + + I+ Q A+G++YLH A IIH
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 155
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCER--------DLTTDM----------------- 642
RD+K+ NI L D +I DFGL T R L+ +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 643 -KSDVHNFGIVLLEILSGRKAY 663
+SDV+ FGIVL E+++G+ Y
Sbjct: 216 FQSDVYAFGIVLYELMTGQLPY 237
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 125/268 (46%), Gaps = 42/268 (15%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
+GRG++G V KA + VA+K+ + + + F +EL L + H NIV L G C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 550 LEMGERLLVYEFMPRGTLHDHLHGGLSPLNW---SLRLKISMQAAKGLEYLHKDAAPPII 606
L LV E+ G+L++ LHG PL + + + +Q ++G+ YLH +I
Sbjct: 71 L--NPVCLVMEYAEGGSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 607 HRDVKTLNILLDSDWGA-RIADFGLLTSCERDLTTDM------------------KSDVH 647
HRD+K N+LL + +I DFG + +T + K DV
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVF 187
Query: 648 NFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFKLAD 707
++GI+L E+++ RK +D P + WA + G +I LP+ +E L
Sbjct: 188 SWGIILWEVITRRKPFDEIGGPAFRIMWA---VHNGTRPPLIKN---LPKPIESLMT--- 238
Query: 708 IAELAIRENPSELPTMSQVATWLEQIVK 735
++PS+ P+M ++ + +++
Sbjct: 239 ---RCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G GS+G VYK VAVK N ++ F+ E+ VL RH NI+ +G
Sbjct: 41 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + + +V ++ +L+ HLH + + I+ Q A+G++YLH A IIH
Sbjct: 99 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 154
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCER--------DLTTDM----------------- 642
RD+K+ NI L D +I DFGL T R L+ +
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 214
Query: 643 -KSDVHNFGIVLLEILSGRKAY 663
+SDV+ FGIVL E+++G+ Y
Sbjct: 215 FQSDVYAFGIVLYELMTGQLPY 236
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+G GS+G VYK VAVK N ++ F+ E+ VL RH NI+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + +V ++ +L+ HLH + + I+ Q A+G++YLH A IIH
Sbjct: 72 YS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCER--------DLTTDM----------------- 642
RD+K+ NI L D +I DFGL T R L+ +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 643 -KSDVHNFGIVLLEILSGRKAY 663
+SDV+ FGIVL E+++G+ Y
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPY 209
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEMELEVLCNI 537
K +LG G +G V + D G QVAVK + +I + + E+E+L N+
Sbjct: 23 LKRIRDLGEGHFGKV-ELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNL 80
Query: 538 RHSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLE 595
H NIV G C E G L+ EF+P G+L ++L + +N +LK ++Q KG++
Sbjct: 81 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMD 140
Query: 596 YLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD-------------- 641
YL + +HRD+ N+L++S+ +I DFGL + E D
Sbjct: 141 YL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 197
Query: 642 ----------MKSDVHNFGIVLLEILS 658
+ SDV +FG+ L E+L+
Sbjct: 198 PECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEMELEVLCNI 537
K +LG G +G V + D G QVAVK + +I + + E+E+L N+
Sbjct: 11 LKRIRDLGEGHFGKV-ELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNL 68
Query: 538 RHSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLE 595
H NIV G C E G L+ EF+P G+L ++L + +N +LK ++Q KG++
Sbjct: 69 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMD 128
Query: 596 YLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD-------------- 641
YL + +HRD+ N+L++S+ +I DFGL + E D
Sbjct: 129 YL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 185
Query: 642 ----------MKSDVHNFGIVLLEILS 658
+ SDV +FG+ L E+L+
Sbjct: 186 PECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 109/233 (46%), Gaps = 39/233 (16%)
Query: 461 PASACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQ-----VAVKRAN 515
P+ P AQ+ L E + K LG G++G VYK + V + VA+K N
Sbjct: 22 PSGTAPNQAQLRILKETE-----LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN 76
Query: 516 AATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGL 575
T N+ EF E ++ ++ H ++V LLG CL +L V + MP G L +++H
Sbjct: 77 ETTGPKANV-EFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHK 134
Query: 576 SPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLT 632
+ L L +Q AKG+ YL + ++HRD+ N+L+ S +I DFG LL
Sbjct: 135 DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE 191
Query: 633 SCERDLTTD--------------------MKSDVHNFGIVLLEILS-GRKAYD 664
E++ D +SDV ++G+ + E+++ G K YD
Sbjct: 192 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 99/204 (48%), Gaps = 35/204 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD--GRQVAVK-RANAATIIHTNIREFEMELEVLCNIRHS 540
K +G+G +G V +L D G +VAVK N AT + F E V+ +RHS
Sbjct: 14 LKLLQTIGKGEFGDV---MLGDYRGNKVAVKCIKNDATA-----QAFLAEASVMTQLRHS 65
Query: 541 NIVNLLGYCLE-MGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLH 598
N+V LLG +E G +V E+M +G+L D+L G S L LK S+ + +EYL
Sbjct: 66 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 125
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE------------------RDLTT 640
+ +HRD+ N+L+ D A+++DFGL R+
Sbjct: 126 GNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAF 182
Query: 641 DMKSDVHNFGIVLLEILS-GRKAY 663
KSDV +FGI+L EI S GR Y
Sbjct: 183 STKSDVWSFGILLWEIYSFGRVPY 206
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 99/204 (48%), Gaps = 35/204 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD--GRQVAVK-RANAATIIHTNIREFEMELEVLCNIRHS 540
K +G+G +G V +L D G +VAVK N AT + F E V+ +RHS
Sbjct: 195 LKLLQTIGKGEFGDV---MLGDYRGNKVAVKCIKNDATA-----QAFLAEASVMTQLRHS 246
Query: 541 NIVNLLGYCLE-MGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLH 598
N+V LLG +E G +V E+M +G+L D+L G S L LK S+ + +EYL
Sbjct: 247 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE------------------RDLTT 640
+ +HRD+ N+L+ D A+++DFGL R+
Sbjct: 307 GNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF 363
Query: 641 DMKSDVHNFGIVLLEILS-GRKAY 663
KSDV +FGI+L EI S GR Y
Sbjct: 364 STKSDVWSFGILLWEIYSFGRVPY 387
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 99/204 (48%), Gaps = 35/204 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD--GRQVAVK-RANAATIIHTNIREFEMELEVLCNIRHS 540
K +G+G +G V +L D G +VAVK N AT + F E V+ +RHS
Sbjct: 23 LKLLQTIGKGEFGDV---MLGDYRGNKVAVKCIKNDATA-----QAFLAEASVMTQLRHS 74
Query: 541 NIVNLLGYCLE-MGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLH 598
N+V LLG +E G +V E+M +G+L D+L G S L LK S+ + +EYL
Sbjct: 75 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE------------------RDLTT 640
+ +HRD+ N+L+ D A+++DFGL R+
Sbjct: 135 GNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF 191
Query: 641 DMKSDVHNFGIVLLEILS-GRKAY 663
KSDV +FGI+L EI S GR Y
Sbjct: 192 STKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 90
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG++YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 148
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEXXSVHN 192
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 99/204 (48%), Gaps = 35/204 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD--GRQVAVK-RANAATIIHTNIREFEMELEVLCNIRHS 540
K +G+G +G V +L D G +VAVK N AT + F E V+ +RHS
Sbjct: 8 LKLLQTIGKGEFGDV---MLGDYRGNKVAVKCIKNDATA-----QAFLAEASVMTQLRHS 59
Query: 541 NIVNLLGYCLE-MGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLH 598
N+V LLG +E G +V E+M +G+L D+L G S L LK S+ + +EYL
Sbjct: 60 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE------------------RDLTT 640
+ +HRD+ N+L+ D A+++DFGL R+
Sbjct: 120 GNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF 176
Query: 641 DMKSDVHNFGIVLLEILS-GRKAY 663
KSDV +FGI+L EI S GR Y
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVPY 200
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 109
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG++YL
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 167
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEYYSVHN 211
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 110
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG++YL
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 168
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEYYSVHN 212
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 91
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG++YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 149
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEYYSVHN 193
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 83
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG++YL
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 141
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEYYSVHN 185
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 89
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG++YL
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 147
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEYYSVHN 191
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 91
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG++YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 149
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEYYSVHN 193
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 198 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 243
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 280
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 90
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG++YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 148
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEYYSVHN 192
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 39/230 (16%)
Query: 464 ACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQ-----VAVKRANAAT 518
P AQ+ L E + K LG G++G VYK + V + VA+K N T
Sbjct: 2 TAPNQAQLRILKETE-----LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 56
Query: 519 IIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPL 578
N+ EF E ++ ++ H ++V LLG CL +L V + MP G L +++H +
Sbjct: 57 GPKANV-EFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNI 114
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCE 635
L L +Q AKG+ YL + ++HRD+ N+L+ S +I DFG LL E
Sbjct: 115 GSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 171
Query: 636 RDLTTD--------------------MKSDVHNFGIVLLEILS-GRKAYD 664
++ D +SDV ++G+ + E+++ G K YD
Sbjct: 172 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 133
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 193
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 194 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 239
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 240 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 276
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 98/216 (45%), Gaps = 43/216 (19%)
Query: 482 NGFKEFNELGRGSYGFVYKA-VLVDGRQV--AVKRANAATIIHTNIREFEMELEVLCNI- 537
N K + +G G++G V KA + DG ++ A+KR + R+F ELEVLC +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLG 83
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGG---------------LSPLNWSL 582
H NI+NLLG C G L E+ P G L D L S L+
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 583 RLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDM 642
L + A+G++YL + IHRD+ NIL+ ++ A+IADFGL E + M
Sbjct: 144 LLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 200
Query: 643 --------------------KSDVHNFGIVLLEILS 658
SDV ++G++L EI+S
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 133
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 193
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 194 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 239
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 240 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 276
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 88
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG++YL
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 146
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEYYSVHN 190
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 111/276 (40%), Gaps = 47/276 (17%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
E+G G +G V+ ++ +VA+K + + E E EV+ + H +V L G
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYG 72
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
CLE LV+EFM G L D+L L + + +G+ YL + +IH
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD+ N L+ + +++DFG+ D T KSD
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 646 VHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFKL 705
V +FG+++ E+ S E +P + + + D + R +P
Sbjct: 190 VWSFGVLMWEVFS---------------EGKIPYENRSNSEVVEDISTGF-RLYKPRLAS 233
Query: 706 ADIAELA---IRENPSELPTMSQVATWLEQIVKDGL 738
+ ++ RE P + P S++ L +I + GL
Sbjct: 234 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 269
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 32/201 (15%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VYK VAVK + F E+ VL RH NI+ +GY
Sbjct: 43 RIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHR 608
+ +V ++ +L+ HLH + + I+ Q A+G++YLH A IIHR
Sbjct: 101 MTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHR 156
Query: 609 DVKTLNILLDSDWGARIADFGLLTSCER--------------------------DLTTDM 642
D+K+ NI L +I DFGL T R +
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 643 KSDVHNFGIVLLEILSGRKAY 663
+SDV+++GIVL E+++G Y
Sbjct: 217 QSDVYSYGIVLYELMTGELPY 237
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 98/216 (45%), Gaps = 43/216 (19%)
Query: 482 NGFKEFNELGRGSYGFVYKA-VLVDGRQV--AVKRANAATIIHTNIREFEMELEVLCNI- 537
N K + +G G++G V KA + DG ++ A+KR + R+F ELEVLC +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLG 73
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGG---------------LSPLNWSL 582
H NI+NLLG C G L E+ P G L D L S L+
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 583 RLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDM 642
L + A+G++YL + IHRD+ NIL+ ++ A+IADFGL E + M
Sbjct: 134 LLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 190
Query: 643 --------------------KSDVHNFGIVLLEILS 658
SDV ++G++L EI+S
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 45/274 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 198 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 243
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
K+ ++ + NPS+ P+ +++ E + ++
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 194
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 195 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 240
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 86
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG++YL
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 144
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEYYSVHN 188
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 195 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 240
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 195 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 240
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 45/274 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 198 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 243
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
K+ ++ + NPS+ P+ +++ E + ++
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 45/274 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 198 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 243
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
K+ ++ + NPS+ P+ +++ E + ++
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 150
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG+++L
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 208
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEFDSVHN 252
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 45/274 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 136
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 196
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 197 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 242
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
K+ ++ + NPS+ P+ +++ E + ++
Sbjct: 243 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 276
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 145
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 205
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 206 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 251
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 252 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 288
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 45/274 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 132
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 193 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 238
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
K+ ++ + NPS+ P+ +++ E + ++
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L ++ + L ++ Q + +EYL K
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY--------------PGIDPSQVYELLEKDYRMERPEGCP 236
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 112/276 (40%), Gaps = 47/276 (17%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
E+G G +G V+ ++ +VA+K ++ + E E EV+ + H +V L G
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE---EAEVMMKLSHPKLVQLYG 89
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
CLE LV+EFM G L D+L L + + +G+ YL + +IH
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD+ N L+ + +++DFG+ D T KSD
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 646 VHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFKL 705
V +FG+++ E+ S E +P + + + D + R +P
Sbjct: 207 VWSFGVLMWEVFS---------------EGKIPYENRSNSEVVEDISTGF-RLYKPRLAS 250
Query: 706 ADIAELA---IRENPSELPTMSQVATWLEQIVKDGL 738
+ ++ +E P + P S++ L +I + GL
Sbjct: 251 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 91
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG+++L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 149
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEFDSVHN 193
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 92
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG+++L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 150
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMLDKEFDSVHN 194
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 378
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHR++ N L+ + ++ADFGL D T +K
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 438
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 439 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 484
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 485 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 521
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 91
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG+++L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 149
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEFDSVHN 193
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 92
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG+++L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 150
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEFDSVHN 194
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 96
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG+++L
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 154
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEFDSVHN 198
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 111/276 (40%), Gaps = 47/276 (17%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
E+G G +G V+ ++ +VA+K + + E E EV+ + H +V L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYG 69
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
CLE LV+EFM G L D+L L + + +G+ YL + +IH
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD+ N L+ + +++DFG+ D T KSD
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 646 VHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFKL 705
V +FG+++ E+ S E +P + + + D + R +P
Sbjct: 187 VWSFGVLMWEVFS---------------EGKIPYENRSNSEVVEDISTGF-RLYKPRLAS 230
Query: 706 ADIAELA---IRENPSELPTMSQVATWLEQIVKDGL 738
+ ++ +E P + P S++ L +I + GL
Sbjct: 231 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 266
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 111/276 (40%), Gaps = 47/276 (17%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
E+G G +G V+ ++ +VA+K + + E E EV+ + H +V L G
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYG 67
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
CLE LV+EFM G L D+L L + + +G+ YL + +IH
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD+ N L+ + +++DFG+ D T KSD
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 646 VHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFKL 705
V +FG+++ E+ S E +P + + + D + R +P
Sbjct: 185 VWSFGVLMWEVFS---------------EGKIPYENRSNSEVVEDISTGF-RLYKPRLAS 228
Query: 706 ADIAELA---IRENPSELPTMSQVATWLEQIVKDGL 738
+ ++ +E P + P S++ L +I + GL
Sbjct: 229 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 264
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 486 EFNE-LGRGSYGFVYKAVLVD--GRQV--AVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FNE +GRG +G VY L+D G+++ AVK N T I + +F E ++ + H
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQFLTEGIIMKDFSHP 89
Query: 541 NIVNLLGYCLEM-GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
N+++LLG CL G L+V +M G L + + + +Q AKG+++L
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 147
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
A+ +HRD+ N +LD + ++ADFGL RD+ VHN
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGL----ARDMYDKEFDSVHN 191
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 336
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHR++ N L+ + ++ADFGL D T +K
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 396
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 397 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 442
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 443 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 479
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 115/271 (42%), Gaps = 45/271 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L +N + L ++ Q + +EYL K
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 132
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 193 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 238
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQI 733
K+ ++ + NPS+ P+ +++ E +
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 43/216 (19%)
Query: 482 NGFKEFNELGRGSYGFVYKA-VLVDGRQV--AVKRANAATIIHTNIREFEMELEVLCNI- 537
N K + +G G++G V KA + DG ++ A+KR + R+F ELEVLC +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLG 80
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGG---------------LSPLNWSL 582
H NI+NLLG C G L E+ P G L D L S L+
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 583 RLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDM 642
L + A+G++YL + IHR++ NIL+ ++ A+IADFGL E + M
Sbjct: 141 LLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 197
Query: 643 --------------------KSDVHNFGIVLLEILS 658
SDV ++G++L EI+S
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L ++ + L ++ Q + +EYL K
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 193 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 238
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L ++ + L ++ Q + +EYL K
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 137
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 198 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 243
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 280
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L ++ + L ++ Q + +EYL K
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 193 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 238
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L ++ + L ++ Q + +EYL K
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 193 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 238
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 110/276 (39%), Gaps = 47/276 (17%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
E+G G +G V+ ++ +VA+K + + E E EV+ + H +V L G
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYG 70
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
CLE LV EFM G L D+L L + + +G+ YL + +IH
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD+ N L+ + +++DFG+ D T KSD
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 646 VHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFKL 705
V +FG+++ E+ S E +P + + + D + R +P
Sbjct: 188 VWSFGVLMWEVFS---------------EGKIPYENRSNSEVVEDISTGF-RLYKPRLAS 231
Query: 706 ADIAELA---IRENPSELPTMSQVATWLEQIVKDGL 738
+ ++ RE P + P S++ L +I + GL
Sbjct: 232 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L ++ + L ++ Q + +EYL K
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY--------------PGIDPSQVYELLEKDYRMERPEGCP 236
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L ++ + L ++ Q + +EYL K
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 193 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 238
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 110/276 (39%), Gaps = 47/276 (17%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
E+G G +G V+ ++ +VA+K + + E E EV+ + H +V L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYG 69
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
CLE LV+EFM G L D+L L + + +G+ YL + + +IH
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIH 126
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD+ N L+ + +++DFG+ D T KSD
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 646 VHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFKL 705
V +FG+++ E+ S E +P + + + D + R +P
Sbjct: 187 VWSFGVLMWEVFS---------------EGKIPYENRSNSEVVEDISTGF-RLYKPRLAS 230
Query: 706 ADIAELA---IRENPSELPTMSQVATWLEQIVKDGL 738
+ ++ +E P + P S++ L I GL
Sbjct: 231 THVYQIMNHCWKERPEDRPAFSRLLRQLAAIAASGL 266
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L ++ + L ++ Q + +EYL K
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 339
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHR++ N L+ + ++ADFGL D T +K
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 399
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 400 SDVWAFGVLLWEIATYGMSPY--------------PGIDLSQVYELLEKDYRMERPEGCP 445
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 446 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 482
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G +G VY+ V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C ++ EFM G L D+L ++ + L ++ Q + +EYL K
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPL 702
SDV FG++L EI + G Y P I + +++++ + R
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY--------------PGIDPSQVYELLEKDYRMERPEGCP 236
Query: 703 FKLADIAELAIRENPSELPTMSQVATWLEQIVKDGLI 739
K+ ++ + NPS+ P+ +++ E + ++ I
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 116/275 (42%), Gaps = 47/275 (17%)
Query: 488 NELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++LG G YG VY V VAVK T+ + EF E V+ I+H N+V LL
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G C +V E+MP G L D+L + + L ++ Q + +EYL K
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN---F 151
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMK 643
IHRD+ N L+ + ++ADFGL D T +K
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 644 SDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIKQGKAAAIIDRNVALPRNVEP 701
SDV FG++L EI + G Y PGI + L+++G + P P
Sbjct: 212 SDVWAFGVLLWEIATYGMSPY------PGIDLSQVYDLLEKG-------YRMEQPEGCPP 258
Query: 702 LFKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
K+ ++ + +P++ P+ ++ E + D
Sbjct: 259 --KVYELMRACWKWSPADRPSFAETHQAFETMFHD 291
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ IRH +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G + L + ++ Q A G+ Y+ + +H
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 198 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 243
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R++P E PT + +LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 26/208 (12%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSN 541
FK N LG+GS+ VY+A + G +VA+K + + ++ + E+++ C ++H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
I+ L Y + LV E G ++ +L + P + + Q G+ YLH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 602 APPIIHRDVKTLNILLDSDWGARIADFGLLTSC----ERDLTT----------------- 640
I+HRD+ N+LL + +IADFGL T E+ T
Sbjct: 133 ---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 189
Query: 641 DMKSDVHNFGIVLLEILSGRKAYDIEYV 668
++SDV + G + +L GR +D + V
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPPFDTDTV 217
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G + L + ++ Q A G+ Y+ + +H
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 198 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 243
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R++P E PT + +LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G + L + ++ Q A G+ Y+ + +H
Sbjct: 71 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 126
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 187 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 232
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R++P E PT + +LE
Sbjct: 233 LHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G + L + ++ Q A G+ Y+ + +H
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 198 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 243
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R++P E PT + +LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G + L + ++ Q A G+ Y+ + +H
Sbjct: 73 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 128
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 189 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 234
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R++P E PT + +LE
Sbjct: 235 LHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G + L + ++ Q A G+ Y+ + +H
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 198 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 243
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R++P E PT + +LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 39/233 (16%)
Query: 461 PASACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRAN 515
P+ P A + L E + FK+ LG G++G VYK + + +G +V A+K
Sbjct: 3 PSGEAPNQALLRILKETE-----FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 57
Query: 516 AATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGL 575
AT N +E E V+ ++ + ++ LLG CL +L++ + MP G L D++
Sbjct: 58 EATSPKAN-KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHK 115
Query: 576 SPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLT 632
+ L +Q AKG+ YL ++HRD+ N+L+ + +I DFG LL
Sbjct: 116 DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 172
Query: 633 SCERDLTTD--------------------MKSDVHNFGIVLLEILS-GRKAYD 664
+ E++ + +SDV ++G+ + E+++ G K YD
Sbjct: 173 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G L + ++ Q A G+ Y+ + +H
Sbjct: 331 VSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 386
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V ++ Q ++R +P E
Sbjct: 447 VWSFGILLTELTTKGRVPY------PGMVN--REVLDQ------VERGYRMPCPPECPES 492
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R+ P E PT + +LE
Sbjct: 493 LHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 51/271 (18%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+LG G +G V+ A +VAVK ++ ++ F E V+ ++H +V L
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKL-- 248
Query: 548 YCLEMGERL-LVYEFMPRGTLHDHL---HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
+ + E + ++ EFM +G+L D L G PL + S Q A+G+ ++ +
Sbjct: 249 HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN-- 304
Query: 604 PIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------D 641
IHRD++ NIL+ + +IADFGL E + T
Sbjct: 305 -YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 642 MKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVE 700
+KSDV +FGI+L+EI++ GR Y P + + ++R +PR
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIPY--------------PGMSNPEVIRALERGYRMPRPEN 409
Query: 701 PLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L +I + P E PT + + L+
Sbjct: 410 CPEELYNIMMRCWKNRPEERPTFEYIQSVLD 440
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 67/292 (22%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATI---IHTNIREFEM-ELEVLCNI-RHSNIV 543
LG G++G V +A G++ AV + + H + +E M EL+++ ++ +H NIV
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 544 NLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLS---------PLNWSLRLKISMQAAKGL 594
NLLG C G L++ E+ G L + L PL L S Q A+G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD------------- 641
+L A+ IHRDV N+LL + A+I DFGL RD+ D
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL----ARDIMNDSNYIVKGNARLPV 218
Query: 642 --------------MKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIV--EWALPLIKQGK 684
++SDV ++GI+L EI S G Y PGI+ L+K G
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY------PGILVNSKFYKLVKDGY 272
Query: 685 AAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
A + P+N+ + + E P+ PT Q+ ++L++ ++
Sbjct: 273 QMA---QPAFAPKNIYSIMQACWALE------PTHRPTFQQICSFLQEQAQE 315
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G + L + ++ Q A G+ Y+ + +H
Sbjct: 82 VSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 198 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 243
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R++P E PT + +LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKR----ANAATIIHTNIREFEMELEVLCNIRH 539
+++ ++G G+YG VYKA GR VA+KR A I T IRE + +L + H
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE----ISLLKELHH 78
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPR--GTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
NIV+L+ LV+EFM + + D GL + L Q +G+ +
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYL---YQLLRGVAHC 135
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H+ I+HRD+K N+L++SD ++ADFGL
Sbjct: 136 HQHR---ILHRDLKPQNLLINSDGALKLADFGL 165
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 115/267 (43%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G L D L G + L + ++ Q A G+ Y+ + +H
Sbjct: 82 VSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 198 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 243
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R++P E PT + +LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 51/271 (18%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+LG G +G V+ A +VAVK ++ ++ F E V+ ++H +V L
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKL-- 75
Query: 548 YCLEMGERL-LVYEFMPRGTLHDHL---HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
+ + E + ++ EFM +G+L D L G PL + S Q A+G+ ++ +
Sbjct: 76 HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN-- 131
Query: 604 PIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------D 641
IHRD++ NIL+ + +IADFGL E + T
Sbjct: 132 -YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 642 MKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVE 700
+KSDV +FGI+L+EI++ GR Y P + + ++R +PR
Sbjct: 191 IKSDVWSFGILLMEIVTYGRIPY--------------PGMSNPEVIRALERGYRMPRPEN 236
Query: 701 PLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L +I + P E PT + + L+
Sbjct: 237 CPEELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 67/292 (22%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATI---IHTNIREFEM-ELEVLCNI-RHSNIV 543
LG G++G V +A G++ AV + + H + +E M EL+++ ++ +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 544 NLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLS---------PLNWSLRLKISMQAAKGL 594
NLLG C G L++ E+ G L + L PL L S Q A+G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD------------- 641
+L A+ IHRDV N+LL + A+I DFGL RD+ D
Sbjct: 174 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL----ARDIMNDSNYIVKGNARLPV 226
Query: 642 --------------MKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIV--EWALPLIKQGK 684
++SDV ++GI+L EI S G Y PGI+ L+K G
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY------PGILVNSKFYKLVKDGY 280
Query: 685 AAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
A + P+N+ + + E P+ PT Q+ ++L++ ++
Sbjct: 281 QMA---QPAFAPKNIYSIMQACWALE------PTHRPTFQQICSFLQEQAQE 323
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKR----ANAATIIHTNIREFEMELEVLCNIRH 539
+++ ++G G+YG VYKA GR VA+KR A I T IRE + +L + H
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE----ISLLKELHH 78
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPR--GTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
NIV+L+ LV+EFM + + D GL + L Q +G+ +
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYL---YQLLRGVAHC 135
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H+ I+HRD+K N+L++SD ++ADFGL
Sbjct: 136 HQHR---ILHRDLKPQNLLINSDGALKLADFGL 165
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 115/267 (43%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G L D L G + L + ++ Q A G+ Y+ + +H
Sbjct: 82 VSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 198 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 243
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R++P E PT + +LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G L + ++ Q A G+ Y+ + +H
Sbjct: 248 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 303
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 364 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 409
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R+ P E PT + +LE
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 115/267 (43%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G + L + ++ Q A G+ Y+ + +H
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD+ NIL+ + ++ADFGL E + T +KSD
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 198 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 243
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R++P E PT + +LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G L + ++ Q A G+ Y+ + +H
Sbjct: 248 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 303
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 364 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 409
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R+ P E PT + +LE
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +A+ +D + A ++ ++ E ++ E+E++ I +H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLR--------------LKI 586
I+NLLG C + G ++ E+ +G L ++L P L +S +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ D +IADFGL
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG++L EI + G Y PG+ VE L+K
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY------PGVPVEELFKLLK 307
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G +D+ P N L+ + A+ PS+ PT Q+ L++IV
Sbjct: 308 EGHR---MDK----PSNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIV 351
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G L + +S Q A G+ Y+ + +H
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVH 134
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 195 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 240
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R+ P E PT + +LE
Sbjct: 241 LHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G L + +S Q A G+ Y+ + +H
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVH 134
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 195 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 240
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R+ P E PT + +LE
Sbjct: 241 LHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +A+ +D + A ++ ++ E ++ E+E++ I +H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLR--------------LKI 586
I+NLLG C + G ++ E+ +G L ++L P L +S +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ D +IADFGL
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG++L EI + G Y PG+ VE L+K
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY------PGVPVEELFKLLK 258
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G +D+ P N L+ + A+ PS+ PT Q+ L++IV
Sbjct: 259 EGHR---MDK----PSNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIV 302
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 47/268 (17%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L Y
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQL--Y 69
Query: 549 CLEMGERL-LVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ E + +V E+M +G+L D L G L + ++ Q A G+ Y+ + +
Sbjct: 70 AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKS 644
HRD++ NIL+ + ++ADFGL E + T +KS
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 645 DVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
DV +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 187 DVWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPE 232
Query: 704 KLADIAELAIRENPSELPTMSQVATWLE 731
L D+ R+ P E PT + +LE
Sbjct: 233 SLHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 41/261 (15%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+LG G +G V+ A +VAVK ++ ++ F E V+ ++H +V L
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKL-- 242
Query: 548 YCLEMGERL-LVYEFMPRGTLHDHL---HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
+ + E + ++ EFM +G+L D L G PL + S Q A+G+ ++ +
Sbjct: 243 HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN-- 298
Query: 604 PIIHRDVKTLNILLDSDWGARIADFGLLTSCERDL------------TTDMKSDVHNFGI 651
IHRD++ NIL+ + +IADFGL + + +KSDV +FGI
Sbjct: 299 -YIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGI 357
Query: 652 VLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFKLADIAE 710
+L+EI++ GR Y P + + ++R +PR +L +I
Sbjct: 358 LLMEIVTYGRIPY--------------PGMSNPEVIRALERGYRMPRPENCPEELYNIMM 403
Query: 711 LAIRENPSELPTMSQVATWLE 731
+ P E PT + + L+
Sbjct: 404 RCWKNRPEERPTFEYIQSVLD 424
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +A+ +D + A ++ ++ E ++ E+E++ I +H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLR--------------LKI 586
I+NLLG C + G ++ E+ +G L ++L P L +S +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ D +IADFGL
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG++L EI + G Y PG+ VE L+K
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY------PGVPVEELFKLLK 255
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G + P N L+ + A+ PS+ PT Q+ L++IV
Sbjct: 256 EG-------HRMDKPSNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIV 299
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 76
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L++ + MP G L D++ + L +Q AKG+ YL
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 136 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +A+ +D + A ++ ++ E ++ E+E++ I +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLR--------------LKI 586
I+NLLG C + G ++ E+ +G L ++L P L +S +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ D +IADFGL
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG++L EI + G Y PG+ VE L+K
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY------PGVPVEELFKLLK 266
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G +D+ P N L+ + A+ PS+ PT Q+ L++IV
Sbjct: 267 EGHR---MDK----PSNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIV 310
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +A+ +D + A ++ ++ E ++ E+E++ I +H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLR--------------LKI 586
I+NLLG C + G ++ E+ +G L ++L P L +S +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ D +IADFGL
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG++L EI + G Y PG+ VE L+K
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY------PGVPVEELFKLLK 259
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G +D+ P N L+ + A+ PS+ PT Q+ L++IV
Sbjct: 260 EGHR---MDK----PSNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIV 303
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 97/226 (42%), Gaps = 42/226 (18%)
Query: 469 AQVFRLSELKDATNGFKEFNELGRGSYGFVY----KAVLVDG--RQVAVKRANAATIIHT 522
A VF E + A ELG+GS+G VY K V+ D +VA+K N A +
Sbjct: 3 ADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 62
Query: 523 NIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG--------- 573
I EF E V+ ++V LLG + L++ E M RG L +L
Sbjct: 63 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
L+P + S ++++ + A G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 634 CE-----------------------RDLTTDMKSDVHNFGIVLLEI 656
+D SDV +FG+VL EI
Sbjct: 179 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 75
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G L + ++ Q A G+ Y+ + +H
Sbjct: 75 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 130
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 191 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 236
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R+ P E PT + +LE
Sbjct: 237 LHDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K + + F E +V+ +RH +V L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNM---SPEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G + L + ++ Q A G+ Y+ + +H
Sbjct: 249 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 304
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 365 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 410
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R++P E PT + +LE
Sbjct: 411 LHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 45/267 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+LG+G +G V+ +VA+K T+ + F E +V+ +RH +V L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
E +V E+M +G+L D L G L + ++ Q A G+ Y+ + +H
Sbjct: 248 VSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 303
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKSD 645
RD++ NIL+ + ++ADFGL E + T +KSD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 646 VHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLFK 704
V +FGI+L E+ + GR Y PG+V + ++R +P E
Sbjct: 364 VWSFGILLTELTTKGRVPY------PGMV--------NREVLDQVERGYRMPCPPECPES 409
Query: 705 LADIAELAIRENPSELPTMSQVATWLE 731
L D+ R+ P E PT + +LE
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 77
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L++ + MP G L D++ + L +Q AKG+ YL
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 137 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 76
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L++ + MP G L D++ + L +Q AKG+ YL
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 136 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 77
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L++ + MP G L D++ + L +Q AKG+ YL
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 137 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 79
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L++ + MP G L D++ + L +Q AKG+ YL
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 139 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +A+ +D + A ++ ++ E ++ E+E++ I +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLR--------------LKI 586
I+NLLG C + G ++ E+ +G L ++L P L +S +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ D +IADFGL
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG++L EI + G Y PG+ VE L+K
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY------PGVPVEELFKLLK 266
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G +D+ P N L+ + A+ PS+ PT Q+ L++IV
Sbjct: 267 EGHR---MDK----PSNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIV 310
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +A+ +D + A ++ ++ E ++ E+E++ I +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLR--------------LKI 586
I+NLLG C + G ++ E+ +G L ++L P L +S +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ D +IADFGL
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG++L EI + G Y PG+ VE L+K
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY------PGVPVEELFKLLK 266
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G +D+ P N L+ + A+ PS+ PT Q+ L++IV
Sbjct: 267 EGHR---MDK----PSNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIV 310
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 40/202 (19%)
Query: 488 NELGRGSYGFVYKAVLV------DGRQVAVKRANAATIIHTNIR-EFEMELEVLCNIRHS 540
ELG G++G V+ A D VAVK A+ N R +F E E+L N++H
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHE 75
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HG--------GLSP--LNWSLRLKISM 588
+IV G C+E ++V+E+M G L+ L HG G P L S L I+
Sbjct: 76 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 589 QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
Q A G+ YL A+ +HRD+ T N L+ + +I DFG+ RD+ + +D +
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGM----SRDVYS---TDYYR 185
Query: 649 FGIVLLEILSGRKAYDIEYVPP 670
G G I ++PP
Sbjct: 186 VG--------GHTMLPIRWMPP 199
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 78
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L++ + MP G L D++ + L +Q AKG+ YL
Sbjct: 79 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 138 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 77
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L++ + MP G L D++ + L +Q AKG+ YL
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 137 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 77
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 137 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 75
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L++ + MP G L D++ + L +Q AKG+ YL
Sbjct: 76 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 77
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 137 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 116/273 (42%), Gaps = 48/273 (17%)
Query: 485 KEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVN 544
K +LG G +G V+ + +VAVK T+ +++ F E ++ ++H +V
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVR 71
Query: 545 LLGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
L + ++ EFM +G+L D L GG L + S Q A+G+ Y+ +
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKN 129
Query: 602 APPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT--------------------- 640
IHRD++ N+L+ +IADFGL E + T
Sbjct: 130 ---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC 186
Query: 641 -DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRN 698
+KS+V +FGI+L EI++ G+ Y PG + + + +PR
Sbjct: 187 FTIKSNVWSFGILLYEIVTYGKIPY------PGRT--------NADVMSALSQGYRMPRM 232
Query: 699 VEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L DI ++ +E E PT + + L+
Sbjct: 233 ENCPDELYDIMKMCWKEKAEERPTFDYLQSVLD 265
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K ++LG+G++G V Y + + G VAVK+ + R+F+ E+++L +
Sbjct: 9 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALH 66
Query: 539 HSNIVNLLGYCLEMG--ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
IV G G E LV E++P G L D L + L+ S L S Q KG+EY
Sbjct: 67 SDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 126
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL--LTSCERDLTT-------------- 640
L + +HRD+ NIL++S+ +IADFGL L ++D
Sbjct: 127 L---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 641 --------DMKSDVHNFGIVLLEILS 658
+SDV +FG+VL E+ +
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 130/298 (43%), Gaps = 73/298 (24%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATI---IHTNIREFEM-ELEVLCNI-RHSNIV 543
LG G++G V +A G++ AV + + H + +E M EL+++ ++ +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 544 NLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP-LNWSLR--------------LKISM 588
NLLG C G L++ E+ G L + L P L +S L S
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 589 QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD------- 641
Q A+G+ +L A+ IHRDV N+LL + A+I DFGL RD+ D
Sbjct: 174 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL----ARDIMNDSNYIVKG 226
Query: 642 --------------------MKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIV--EWALP 678
++SDV ++GI+L EI S G Y PGI+
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY------PGILVNSKFYK 280
Query: 679 LIKQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
L+K G A + P+N+ + + E P+ PT Q+ ++L++ ++
Sbjct: 281 LVKDGYQMA---QPAFAPKNIYSIMQACWALE------PTHRPTFQQICSFLQEQAQE 329
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 78
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 138 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 81
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 82 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 140
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 141 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 78
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 138 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 75
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 42/226 (18%)
Query: 469 AQVFRLSELKDATNGFKEFNELGRGSYGFVY----KAVLVDG--RQVAVKRANAATIIHT 522
A V+ E + A ELG+GS+G VY K V+ D +VA+K N A +
Sbjct: 6 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 65
Query: 523 NIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG--------- 573
I EF E V+ ++V LLG + L++ E M RG L +L
Sbjct: 66 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
L+P + S ++++ + A G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 634 CE-----------------------RDLTTDMKSDVHNFGIVLLEI 656
+D SDV +FG+VL EI
Sbjct: 182 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 75
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 82
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 142 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 91/210 (43%), Gaps = 44/210 (20%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHGGLSP-----------LNWSLRLKISMQAA 591
NLLG C + G L+V EF G L +L + L + S Q A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD-------------- 637
KG+E+L A+ IHRD+ NILL +I DFGL +D
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 638 ---------LTTDMKSDVHNFGIVLLEILS 658
++SDV +FG++L EI S
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 75
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 100
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 101 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 159
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 160 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 217 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 78
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 138 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K ++LG+G++G V Y + + G VAVK+ + R+F+ E+++L +
Sbjct: 13 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP--DQQRDFQREIQILKALH 70
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
IV G G + LV E++P G L D L + L+ S L S Q KG+EY
Sbjct: 71 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 130
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL--LTSCERDLTT-------------- 640
L + +HRD+ NIL++S+ +IADFGL L ++D
Sbjct: 131 L---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 187
Query: 641 --------DMKSDVHNFGIVLLEILS 658
+SDV +FG+VL E+ +
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K ++LG+G++G V Y + + G VAVK+ + R+F+ E+++L +
Sbjct: 12 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP--DQQRDFQREIQILKALH 69
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
IV G G + LV E++P G L D L + L+ S L S Q KG+EY
Sbjct: 70 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 129
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL--LTSCERDLTT-------------- 640
L + +HRD+ NIL++S+ +IADFGL L ++D
Sbjct: 130 L---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 641 --------DMKSDVHNFGIVLLEILS 658
+SDV +FG+VL E+ +
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 82
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 142 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +A+ +D + A ++ ++ E ++ E+E++ I +H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+NLLG C + G ++ E+ +G L ++L P L+ +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ D +IADFGL
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG++L EI + G Y PG+ VE L+K
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY------PGVPVEELFKLLK 251
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G +D+ P N L+ + A+ PS+ PT Q+ L++IV
Sbjct: 252 EGHR---MDK----PSNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIV 295
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 85
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 86 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 144
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 145 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 36/206 (17%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
K ++LG+G++G V Y + + G VAVK+ + R+F+ E+++L +
Sbjct: 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP--DQQRDFQREIQILKALH 82
Query: 539 HSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
IV G G + LV E++P G L D L + L+ S L S Q KG+EY
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 142
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL--LTSCERDLTT-------------- 640
L + +HRD+ NIL++S+ +IADFGL L ++D
Sbjct: 143 L---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 199
Query: 641 --------DMKSDVHNFGIVLLEILS 658
+SDV +FG+VL E+ +
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 103/263 (39%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ PRG ++ L LS + + A L Y H + +IH
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIH 136
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------DMKSDVHN 648
RD+K N+LL S +IADFG T D K D+ +
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 197 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 244
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 245 --------LLKHNPSQRPMLREV 259
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 91/212 (42%), Gaps = 46/212 (21%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHGGLSP-------------LNWSLRLKISMQ 589
NLLG C + G L+V EF G L +L + L + S Q
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 590 AAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER------------- 636
AKG+E+L A+ IHRD+ NILL +I DFGL +
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 637 ----------DLTTDMKSDVHNFGIVLLEILS 658
D ++SDV +FG++L EI S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 42/226 (18%)
Query: 469 AQVFRLSELKDATNGFKEFNELGRGSYGFVY----KAVLVDG--RQVAVKRANAATIIHT 522
A V+ E + A ELG+GS+G VY K V+ D +VA+K N A +
Sbjct: 6 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 65
Query: 523 NIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG--------- 573
I EF E V+ ++V LLG + L++ E M RG L +L
Sbjct: 66 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
L+P + S ++++ + A G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 634 CE-----------------------RDLTTDMKSDVHNFGIVLLEI 656
+D SDV +FG+VL EI
Sbjct: 182 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 127/294 (43%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +A+ +D + A ++ ++ E ++ E+E++ I +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+NLLG C + G ++ E+ +G L ++L P L+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ D +IADFGL
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG++L EI + G Y PG+ VE L+K
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY------PGVPVEELFKLLK 266
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G + P N L+ + A+ PS+ PT Q+ L++IV
Sbjct: 267 EG-------HRMDKPSNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIV 310
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 42/226 (18%)
Query: 469 AQVFRLSELKDATNGFKEFNELGRGSYGFVY----KAVLVDG--RQVAVKRANAATIIHT 522
A V+ E + A ELG+GS+G VY K V+ D +VA+K N A +
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 71
Query: 523 NIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG--------- 573
I EF E V+ ++V LLG + L++ E M RG L +L
Sbjct: 72 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
L+P + S ++++ + A G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 634 CE-----------------------RDLTTDMKSDVHNFGIVLLEI 656
+D SDV +FG+VL EI
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 42/226 (18%)
Query: 469 AQVFRLSELKDATNGFKEFNELGRGSYGFVY----KAVLVDG--RQVAVKRANAATIIHT 522
A V+ E + A ELG+GS+G VY K V+ D +VA+K N A +
Sbjct: 2 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 61
Query: 523 NIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG--------- 573
I EF E V+ ++V LLG + L++ E M RG L +L
Sbjct: 62 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
L+P + S ++++ + A G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 177
Query: 634 CE-----------------------RDLTTDMKSDVHNFGIVLLEI 656
+D SDV +FG+VL EI
Sbjct: 178 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 104/263 (39%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H + +IH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIH 132
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTTDM-------------------KSDVHN 648
RD+K N+LL S +IADFG TD+ K D+ +
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 192
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 193 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 240
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 241 --------LLKHNPSQRPMLREV 255
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 107/273 (39%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 129
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDM--------------- 642
H + +IHRD+K N+LL S +IADFG TD+
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGR 186
Query: 643 ----KSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 244
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 245 ------------------LLKHNPSQRPMLREV 259
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 69
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 70 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 128
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 129 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 466 PGMAQVFRLSE---LKDATNGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIH 521
P Q+ +L E K F +LG GSYG VYKA+ + G+ VA+K+ +
Sbjct: 10 PPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP----VE 65
Query: 522 TNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWS 581
++++E E+ ++ ++V G + + +V E+ G++ D + L
Sbjct: 66 SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED 125
Query: 582 LRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
I KGLEYLH IHRD+K NILL+++ A++ADFG+
Sbjct: 126 EIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGV 171
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 42/226 (18%)
Query: 469 AQVFRLSELKDATNGFKEFNELGRGSYGFVY----KAVLVDG--RQVAVKRANAATIIHT 522
A V+ E + A ELG+GS+G VY K V+ D +VA+K N A +
Sbjct: 5 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 64
Query: 523 NIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG--------- 573
I EF E V+ ++V LLG + L++ E M RG L +L
Sbjct: 65 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
L+P + S ++++ + A G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 634 CE-----------------------RDLTTDMKSDVHNFGIVLLEI 656
+D SDV +FG+VL EI
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 42/226 (18%)
Query: 469 AQVFRLSELKDATNGFKEFNELGRGSYGFVY----KAVLVDG--RQVAVKRANAATIIHT 522
A V+ E + A ELG+GS+G VY K V+ D +VA+K N A +
Sbjct: 5 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 64
Query: 523 NIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG--------- 573
I EF E V+ ++V LLG + L++ E M RG L +L
Sbjct: 65 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
L+P + S ++++ + A G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 634 CE-----------------------RDLTTDMKSDVHNFGIVLLEI 656
+D SDV +FG+VL EI
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 113/273 (41%), Gaps = 48/273 (17%)
Query: 485 KEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVN 544
K LG G +G V+ + +VAVK T+ +++ F E ++ ++H +V
Sbjct: 16 KLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVR 72
Query: 545 LLGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
L ++ E+M +G+L D L GG L + S Q A+G+ Y+ +
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKN 130
Query: 602 APPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT--------------------- 640
IHRD++ N+L+ +IADFGL E + T
Sbjct: 131 ---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC 187
Query: 641 -DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRN 698
+KSDV +FGI+L EI++ G+ Y PG + + +PR
Sbjct: 188 FTIKSDVWSFGILLYEIVTYGKIPY------PGRT--------NADVMTALSQGYRMPRV 233
Query: 699 VEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L DI ++ +E E PT + + L+
Sbjct: 234 ENCPDELYDIMKMCWKEKAEERPTFDYLQSVLD 266
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 105/263 (39%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H + +IH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIH 132
Query: 608 RDVKTLNILLDSDWGARIADFGL---LTSCERDL----------------TTDMKSDVHN 648
RD+K N+LL S +IADFG S RD D K D+ +
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWS 192
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 193 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 240
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 241 --------LLKHNPSQRPMLREV 255
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 42/226 (18%)
Query: 469 AQVFRLSELKDATNGFKEFNELGRGSYGFVY----KAVLVDG--RQVAVKRANAATIIHT 522
A V+ E + A ELG+GS+G VY K V+ D +VA+K N A +
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 71
Query: 523 NIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG--------- 573
I EF E V+ ++V LLG + L++ E M RG L +L
Sbjct: 72 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
L+P + S ++++ + A G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 634 CE-----------------------RDLTTDMKSDVHNFGIVLLEI 656
+D SDV +FG+VL EI
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 114/256 (44%), Gaps = 58/256 (22%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEMELEVLCNI 537
K+ +LG G +G V D G VAVK A A + ++ E+++L +
Sbjct: 16 LKKIRDLGEGHFGKV-SLYCYDPTNDGTGEMVAVK-ALKADCGPQHRSGWKQEIDILRTL 73
Query: 538 RHSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHL--HG-GLSPLNWSLRLKISMQAAK 592
H +I+ G C + GE+ LV E++P G+L D+L H GL+ L L + Q +
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICE 128
Query: 593 GLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS------------------- 633
G+ YLH A IHR++ N+LLD+D +I DFGL +
Sbjct: 129 GMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 634 -----CERDLTTDMKSDVHNFGIVLLEILSGRKAYDIEYVPP-------GIVEWALPLIK 681
C ++ SDV +FG+ L E+L+ D PP GI + + ++
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT---HCDSSQSPPTKFLELIGIAQGQMTVL- 241
Query: 682 QGKAAAIIDRNVALPR 697
+ +++R LPR
Sbjct: 242 --RLTELLERGERLPR 255
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 104/263 (39%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H +IH
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCHSKR---VIH 157
Query: 608 RDVKTLNILLDSDWGARIADFGL---LTSCERD----------------LTTDMKSDVHN 648
RD+K N+LL S +IADFG S RD D K D+ +
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWS 217
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 218 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 265
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 266 --------LLKHNPSQRPMLREV 280
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 94/217 (43%), Gaps = 53/217 (24%)
Query: 488 NELGRGSYGFVYKAV------LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSN 541
ELG G++G V+ A D VAVK T+ ++F+ E E+L N++H +
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL--AARKDFQREAELLTNLQHEH 78
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HG-------------GLSPLNWSLRLKI 586
IV G C + ++V+E+M G L+ L HG L S L I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSC------------ 634
+ Q A G+ YL A+ +HRD+ T N L+ ++ +I DFG+
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 635 -------------ERDLTTDMKSDVHNFGIVLLEILS 658
R TT+ SDV +FG++L EI +
Sbjct: 196 MLPIRWMPPESIMYRKFTTE--SDVWSFGVILWEIFT 230
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 106/273 (38%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 124
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDM--------------- 642
H +IHRD+K N+LL S +IADFG TD+
Sbjct: 125 HSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 643 ----KSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 239
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 240 ------------------LLKHNPSQRPMLREV 254
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 106/273 (38%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 124
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDM--------------- 642
H +IHRD+K N+LL S +IADFG TD+
Sbjct: 125 HSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 643 ----KSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 239
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 240 ------------------LLKHNPSQRPMLREV 254
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 42/207 (20%)
Query: 488 NELGRGSYGFVY----KAVLVDG--RQVAVKRANAATIIHTNIREFEMELEVLCNIRHSN 541
ELG+GS+G VY K V+ D +VA+K N A + I EF E V+ +
Sbjct: 16 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEASVMKEFNCHH 74
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG---------GLSPLNWSLRLKISMQAAK 592
+V LLG + L++ E M RG L +L L+P + S ++++ + A
Sbjct: 75 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 134
Query: 593 GLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE----------------- 635
G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 135 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 191
Query: 636 ------RDLTTDMKSDVHNFGIVLLEI 656
+D SDV +FG+VL EI
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 489 ELGRGSYGFVYKAV------LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
ELG G++G V+ A D VAVK A+ + ++F+ E E+L ++H +I
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTMLQHQHI 105
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHL--HG------------GLSPLNWSLRLKISM 588
V G C E L+V+E+M G L+ L HG PL L ++
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 589 QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
Q A G+ YL A +HRD+ T N L+ +I DFG+ RD+ + +D +
Sbjct: 166 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM----SRDIYS---TDYYR 215
Query: 649 FGIVLLEILSGRKAYDIEYVPP 670
G GR I ++PP
Sbjct: 216 VG--------GRTMLPIRWMPP 229
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 91/210 (43%), Gaps = 44/210 (20%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHGGLSP-----------LNWSLRLKISMQAA 591
NLLG C + G L+V EF G L +L + L + S Q A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD-------------- 637
KG+E+L A+ IHRD+ NILL +I DFGL +D
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 638 ---------LTTDMKSDVHNFGIVLLEILS 658
++SDV +FG++L EI S
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 42/207 (20%)
Query: 488 NELGRGSYGFVY----KAVLVDG--RQVAVKRANAATIIHTNIREFEMELEVLCNIRHSN 541
ELG+GS+G VY K V+ D +VA+K N A + I EF E V+ +
Sbjct: 18 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEASVMKEFNCHH 76
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG---------GLSPLNWSLRLKISMQAAK 592
+V LLG + L++ E M RG L +L L+P + S ++++ + A
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 593 GLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE----------------- 635
G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 137 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 636 ------RDLTTDMKSDVHNFGIVLLEI 656
+D SDV +FG+VL EI
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 128/294 (43%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +AV +D + A ++ + E ++ E+E++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+NLLG C + G ++ E+ +G L ++L P + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ + RIADFGL
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG+++ EI + G Y PGI VE L+K
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY------PGIPVEELFKLLK 273
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G +D+ P N L+ + A+ PS+ PT Q+ L++I+
Sbjct: 274 EGHR---MDK----PANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIL 317
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 129/296 (43%), Gaps = 71/296 (23%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATI---IHTNIREFEM-ELEVLCNI-RHSNIV 543
LG G++G V +A G++ AV + + H + +E M EL+++ ++ +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 544 NLLGYCLEMGERLLVYEFMPRGTLHDHLHG-------------GLSPLNWSLRLKISMQA 590
NLLG C G L++ E+ G L + L S L+ L S Q
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 591 AKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD--------- 641
A+G+ +L A+ IHRDV N+LL + A+I DFGL RD+ D
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL----ARDIMNDSNYIVKGNA 226
Query: 642 ------------------MKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIV--EWALPLI 680
++SDV ++GI+L EI S G Y PGI+ L+
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY------PGILVNSKFYKLV 280
Query: 681 KQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
K G A + P+N+ + + E P+ PT Q+ ++L++ ++
Sbjct: 281 KDGYQMA---QPAFAPKNIYSIMQACWALE------PTHRPTFQQICSFLQEQAQE 327
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 42/226 (18%)
Query: 469 AQVFRLSELKDATNGFKEFNELGRGSYGFVY----KAVLVDG--RQVAVKRANAATIIHT 522
A V+ E + A ELG+GS+G VY K V+ D +VA+K N A +
Sbjct: 34 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 93
Query: 523 NIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG--------- 573
I EF E V+ ++V LLG + L++ E M RG L +L
Sbjct: 94 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 152
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
L+P + S ++++ + A G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 153 VLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 209
Query: 634 CE-----------------------RDLTTDMKSDVHNFGIVLLEI 656
+D SDV +FG+VL EI
Sbjct: 210 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 39/232 (16%)
Query: 462 ASACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANA 516
+ A P A + L E + ++ LG G++G VYK + + DG V A+K
Sbjct: 2 SGAAPNQALLRILKETE-----LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRE 56
Query: 517 ATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLS 576
T N +E E V+ + + LLG CL +L V + MP G L DH+
Sbjct: 57 NTSPKAN-KEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRG 114
Query: 577 PLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER 636
L L MQ AKG+ YL ++HRD+ N+L+ S +I DFGL +
Sbjct: 115 RLGSQDLLNWCMQIAKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDI 171
Query: 637 DLTT-----------------------DMKSDVHNFGIVLLEILS-GRKAYD 664
D T +SDV ++G+ + E+++ G K YD
Sbjct: 172 DETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 107/273 (39%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 127
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL---LTSCERD----------------L 638
H +IHRD+K N+LL S +IADFG S RD
Sbjct: 128 HSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGR 184
Query: 639 TTDMKSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
D K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 242
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 243 ------------------LLKHNPSQRPMLREV 257
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 489 ELGRGSYGFVYKAVL------VDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
ELG G++G V+ A D VAVK A+ + ++F+ E E+L ++H +I
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTMLQHQHI 76
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHL--HG------------GLSPLNWSLRLKISM 588
V G C E L+V+E+M G L+ L HG PL L ++
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 589 QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
Q A G+ YL A +HRD+ T N L+ +I DFG+ RD+ + +D +
Sbjct: 137 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM----SRDIYS---TDYYR 186
Query: 649 FGIVLLEILSGRKAYDIEYVPP 670
G GR I ++PP
Sbjct: 187 VG--------GRTMLPIRWMPP 200
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ LG G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 72
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q A+G+ YL
Sbjct: 73 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE 131
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 132 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 103/263 (39%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H + +IH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIH 136
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------DMKSDVHN 648
RD+K N+LL S +IADFG T D K D+ +
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWS 196
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 197 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 244
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 245 --------LLKHNPSQRPXLREV 259
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 489 ELGRGSYGFVYKAVL------VDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
ELG G++G V+ A D VAVK A+ + ++F+ E E+L ++H +I
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTMLQHQHI 82
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHL--HG------------GLSPLNWSLRLKISM 588
V G C E L+V+E+M G L+ L HG PL L ++
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 589 QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHN 648
Q A G+ YL A +HRD+ T N L+ +I DFG+ RD+ + +D +
Sbjct: 143 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM----SRDIYS---TDYYR 192
Query: 649 FGIVLLEILSGRKAYDIEYVPP 670
G GR I ++PP
Sbjct: 193 VG--------GRTMLPIRWMPP 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 102/263 (38%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H +IH
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCHSKR---VIH 157
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------DMKSDVHN 648
RD+K N+LL S +IADFG T D K D+ +
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 217
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 218 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 265
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 266 --------LLKHNPSQRPMLREV 280
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 124
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------- 640
H +IHRD+K N+LL S +IADFG T
Sbjct: 125 HSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 181
Query: 641 --DMKSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
D K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 239
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 240 ------------------LLKHNPSQRPMLREV 254
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 58/256 (22%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEMELEVLCNI 537
K+ +LG G +G V D G VAVK A A + ++ E+++L +
Sbjct: 16 LKKIRDLGEGHFGKV-SLYCYDPTNDGTGEMVAVK-ALKADCGPQHRSGWKQEIDILRTL 73
Query: 538 RHSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHL--HG-GLSPLNWSLRLKISMQAAK 592
H +I+ G C + GE+ LV E++P G+L D+L H GL+ L L + Q +
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICE 128
Query: 593 GLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS------------------- 633
G+ YLH IHR++ N+LLD+D +I DFGL +
Sbjct: 129 GMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 634 -----CERDLTTDMKSDVHNFGIVLLEILSGRKAYDIEYVPP-------GIVEWALPLIK 681
C ++ SDV +FG+ L E+L+ D PP GI + + ++
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT---HCDSSQSPPTKFLELIGIAQGQMTVL- 241
Query: 682 QGKAAAIIDRNVALPR 697
+ +++R LPR
Sbjct: 242 --RLTELLERGERLPR 255
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 124
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------- 640
H +IHRD+K N+LL S +IADFG T
Sbjct: 125 HSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGR 181
Query: 641 --DMKSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
D K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 239
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 240 ------------------LLKHNPSQRPMLREV 254
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ L G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 82
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L++ + MP G L D++ + L +Q AKG+ YL
Sbjct: 83 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 142 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 461 PASACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRAN 515
P+ P A + L E + FK+ LG G++G VYK + + +G +V A+
Sbjct: 33 PSGEAPNQALLRILKETE-----FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELR 87
Query: 516 AATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGL 575
AT N +E E V+ ++ + ++ LLG CL +L+ + MP G L D++
Sbjct: 88 EATSPKAN-KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHK 145
Query: 576 SPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLT 632
+ L +Q AKG+ YL ++HRD+ N+L+ + +I DFG LL
Sbjct: 146 DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 202
Query: 633 SCERDLTTD--------------------MKSDVHNFGIVLLEILS-GRKAYD 664
+ E++ + +SDV ++G+ + E+++ G K YD
Sbjct: 203 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 103/263 (39%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H + +IH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIH 136
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------DMKSDVHN 648
RD+K N+LL S +IADFG T D K D+ +
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 197 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 244
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 245 --------LLKHNPSQRPMLREV 259
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAVL-VDGRQVAVKRANAATIIHTNIREFEMELEVLCNI 537
D + ++ +G G+YG V A + G+QVA+K+ A + TN + EL++L +
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF 111
Query: 538 RHSNIV---NLLGYCLEMGERLLVYEFMP--RGTLHDHLHGGLSPLNWSLRLKISMQAAK 592
+H NI+ ++L + GE VY + LH +H PL Q +
Sbjct: 112 KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS-QPLTLEHVRYFLYQLLR 170
Query: 593 GLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
GL+Y+H +IHRD+K N+L++ + +I DFG+
Sbjct: 171 GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGM 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 103/263 (39%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H + +IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIH 134
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------DMKSDVHN 648
RD+K N+LL S +IADFG T D K D+ +
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 195 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 242
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 243 --------LLKHNPSQRPMLREV 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 103/263 (39%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H + +IH
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIH 148
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------DMKSDVHN 648
RD+K N+LL S +IADFG T D K D+ +
Sbjct: 149 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 208
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 209 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 256
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 257 --------LLKHNPSQRPMLREV 271
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ L G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 75
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 130/296 (43%), Gaps = 71/296 (23%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATI---IHTNIREFEM-ELEVLCNI-RHSNIV 543
LG G++G V +A G++ AV + + H + +E M EL+++ ++ +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 544 NLLGYCLEMGERLLVYEFMPRGTLHDHLHG-----------GLSPLNWSLR--LKISMQA 590
NLLG C G L++ E+ G L + L ++ S R L S Q
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 591 AKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD--------- 641
A+G+ +L A+ IHRDV N+LL + A+I DFGL RD+ D
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL----ARDIMNDSNYIVKGNA 226
Query: 642 ------------------MKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIV--EWALPLI 680
++SDV ++GI+L EI S G Y PGI+ L+
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY------PGILVNSKFYKLV 280
Query: 681 KQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
K G A + P+N+ + + E P+ PT Q+ ++L++ ++
Sbjct: 281 KDGYQMA---QPAFAPKNIYSIMQACWALE------PTHRPTFQQICSFLQEQAQE 327
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 34/210 (16%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQV----AVKRANAATIIHTNIREFEMELEVLCNIR 538
FK+ L G++G VYK + + +G +V A+K AT N +E E V+ ++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 82
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ ++ LLG CL +L+ + MP G L D++ + L +Q AKG+ YL
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG---LLTSCERDLTTD-------------- 641
++HRD+ N+L+ + +I DFG LL + E++ +
Sbjct: 142 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 642 ------MKSDVHNFGIVLLEILS-GRKAYD 664
+SDV ++G+ + E+++ G K YD
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 103/263 (39%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ PRG ++ L LS + + A L Y H + +IH
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIH 136
Query: 608 RDVKTLNILLDSDWGARIADFG-------------------LLTSCERDLTTDMKSDVHN 648
RD+K N+LL S +IADFG L D K D+ +
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 197 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 244
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 245 --------LLKHNPSQRPMLREV 259
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEM--ELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + + T + E ++ E+E+ ++RH NI+ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H + +IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQ-KLSRFDEQRTATYITELANALSYCH---SKRVIH 135
Query: 608 RDVKTLNILLDSDWGARIADFGL---LTSCERDL----------------TTDMKSDVHN 648
RD+K N+LL S+ +IADFG S RD D K D+ +
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWS 195
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G Y Y VE+ P A +I R L N
Sbjct: 196 LGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISR--LLKHNASQRL 253
Query: 704 KLADIAE 710
LA++ E
Sbjct: 254 TLAEVLE 260
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 130/305 (42%), Gaps = 80/305 (26%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATI---IHTNIREFEM-ELEVLCNI-RHSNIV 543
LG G++G V +A G++ AV + + H + +E M EL+++ ++ +H NIV
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 544 NLLGYCLEMGERLLVYEFMPRGTLHDHLH-----------------GGLS-----PLNWS 581
NLLG C G L++ E+ G L + L GL PL
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 582 LRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD 641
L S Q A+G+ +L A+ IHRDV N+LL + A+I DFGL RD+ D
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL----ARDIMND 211
Query: 642 ---------------------------MKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIV 673
++SDV ++GI+L EI S G Y PGI+
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY------PGIL 265
Query: 674 --EWALPLIKQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
L+K G A + P+N+ + + E P+ PT Q+ ++L+
Sbjct: 266 VNSKFYKLVKDGYQMA---QPAFAPKNIYSIMQACWALE------PTHRPTFQQICSFLQ 316
Query: 732 QIVKD 736
+ ++
Sbjct: 317 EQAQE 321
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +AV +D + A ++ + E ++ E+E++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+NLLG C + G ++ E+ +G L ++L P + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ + +IADFGL
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG+++ EI + G Y PGI VE L+K
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY------PGIPVEELFKLLK 273
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G +D+ P N L+ + A+ PS+ PT Q+ L++I+
Sbjct: 274 EGHR---MDK----PANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIL 317
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 128
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------- 640
H +IHRD+K N+LL S +IADFG T
Sbjct: 129 HSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 641 --DMKSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
D K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 243
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 244 ------------------LLKHNPSQRPMLREV 258
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +AV +D + A ++ + E ++ E+E++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+NLLG C + G ++ E+ +G L ++L P + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ + +IADFGL
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG+++ EI + G Y PGI VE L+K
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY------PGIPVEELFKLLK 273
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G + P N L+ + A+ PS+ PT Q+ L++I+
Sbjct: 274 EG-------HRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIL 317
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +AV +D + A ++ + E ++ E+E++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+NLLG C + G ++ E+ +G L ++L P + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ + +IADFGL
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG+++ EI + G Y PGI VE L+K
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY------PGIPVEELFKLLK 273
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G + P N L+ + A+ PS+ PT Q+ L++I+
Sbjct: 274 EG-------HRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIL 317
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +AV +D + A ++ + E ++ E+E++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+NLLG C + G ++ E+ +G L ++L P + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ + +IADFGL
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG+++ EI + G Y PGI VE L+K
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY------PGIPVEELFKLLK 273
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G + P N L+ + A+ PS+ PT Q+ L++I+
Sbjct: 274 EG-------HRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIL 317
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 94/211 (44%), Gaps = 47/211 (22%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIRE-FEMELEVLCN 536
K+ +LG G +G V D G VAVK +R ++ E+E+L
Sbjct: 11 LKKIRDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGC--GPQLRSGWQREIEILRT 67
Query: 537 IRHSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHG---GLSPLNWSLRLKISMQAA 591
+ H +IV G C + GE+ LV E++P G+L D+L GL+ L L + Q
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQIC 122
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS------------------ 633
+G+ YLH A IHR + N+LLD+D +I DFGL +
Sbjct: 123 EGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 179
Query: 634 ------CERDLTTDMKSDVHNFGIVLLEILS 658
C ++ SDV +FG+ L E+L+
Sbjct: 180 FWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 26/206 (12%)
Query: 491 GRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCL 550
RG +G V+KA L++ VAVK I + E E+ L ++H NI+ +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVK---IFPIQDKQSWQNEYEVYSLPGMKHENILQFIG-AE 87
Query: 551 EMGERL-----LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD----- 600
+ G + L+ F +G+L D L + ++W+ I+ A+GL YLH+D
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 601 --AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-DMKSDVHNFGIVLLEIL 657
P I HRD+K+ N+LL ++ A IADFGL E + D V + E+L
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205
Query: 658 SG-----RKAY-DIEYVPPGIVEWAL 677
G R A+ I+ G+V W L
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 127
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFG-------------------LLTSCERDL 638
H +IHRD+K N+LL S +IADFG L
Sbjct: 128 HSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGR 184
Query: 639 TTDMKSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
D K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 242
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 243 ------------------LLKHNPSQRPMLREV 257
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 124
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------- 640
H +IHRD+K N+LL S +IADFG T
Sbjct: 125 HSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGR 181
Query: 641 --DMKSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
D K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 239
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 240 ------------------LLKHNPSQRPMLREV 254
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 94/211 (44%), Gaps = 47/211 (22%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIRE-FEMELEVLCN 536
K+ +LG G +G V D G VAVK +R ++ E+E+L
Sbjct: 10 LKKIRDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGC--GPQLRSGWQREIEILRT 66
Query: 537 IRHSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHG---GLSPLNWSLRLKISMQAA 591
+ H +IV G C + GE+ LV E++P G+L D+L GL+ L L + Q
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQIC 121
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS------------------ 633
+G+ YLH A IHR + N+LLD+D +I DFGL +
Sbjct: 122 EGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 178
Query: 634 ------CERDLTTDMKSDVHNFGIVLLEILS 658
C ++ SDV +FG+ L E+L+
Sbjct: 179 FWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 31/220 (14%)
Query: 462 ASACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIH 521
A PGM + + D F + +G+GS+G V+K + +QV +
Sbjct: 8 AVQVPGMQ-----NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE 62
Query: 522 TNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWS 581
I + + E+ VL S + G L+ + ++ E++ G+ D L G P +
Sbjct: 63 DEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG--PFDEF 120
Query: 582 LRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL---LTSCERDL 638
+ + KGL+YLH + IHRD+K N+LL ++ADFG+ LT +
Sbjct: 121 QIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 177
Query: 639 TT------------------DMKSDVHNFGIVLLEILSGR 660
T D K+D+ + GI +E+ G
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 123
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------- 640
H +IHRD+K N+LL S +IADFG T
Sbjct: 124 HSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 180
Query: 641 --DMKSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
D K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 238
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 239 ------------------LLKHNPSQRPMLREV 253
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 31/209 (14%)
Query: 491 GRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCN--IRHSNIVNLL-- 546
RG +G V+KA L++ VAVK + + ++ E E+ ++H N++ +
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVK-----IFPLQDKQSWQSEREIFSTPGMKHENLLQFIAA 77
Query: 547 ---GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA-- 601
G LE+ E L+ F +G+L D+L G + + W+ ++ ++GL YLH+D
Sbjct: 78 EKRGSNLEV-ELWLITAFHDKGSLTDYLKGNI--ITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 602 ------APPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-DMKSDVHNFGIVLL 654
P I HRD K+ N+LL SD A +ADFGL E D V +
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 655 EILSG-----RKAY-DIEYVPPGIVEWAL 677
E+L G R A+ I+ G+V W L
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWEL 223
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 27/172 (15%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
FKE +G G +G V+KA +DG+ +KR + N + E E++ L + H NI
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKR------VKYNNEKAEREVKALAKLDHVNI 66
Query: 543 VNLLG------YCLEMGER----------LLVYEFMPRGTLHDHLHGGL-SPLNWSLRLK 585
V+ G Y E + + EF +GTL + L+ L L+
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 586 ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
+ Q KG++Y+H + +I+RD+K NI L +I DFGL+TS + D
Sbjct: 127 LFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 42/207 (20%)
Query: 488 NELGRGSYGFVY----KAVLVDG--RQVAVKRANAATIIHTNIREFEMELEVLCNIRHSN 541
ELG+GS+G VY K V+ D +VA+K N A + I EF E V+ +
Sbjct: 18 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEASVMKEFNCHH 76
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG---------GLSPLNWSLRLKISMQAAK 592
+V LLG + L++ E M RG L +L L+P + S ++++ + A
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 593 GLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE----------------- 635
G+ YL+ A +HRD+ N + D+ +I DFG+
Sbjct: 137 GMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 636 ------RDLTTDMKSDVHNFGIVLLEI 656
+D SDV +FG+VL EI
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 119/276 (43%), Gaps = 69/276 (25%)
Query: 466 PGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVD------GRQVAVK--RANAA 517
PG VF LK + +LG G +G V D G VAVK +A+A
Sbjct: 22 PGDPTVFHKRYLK-------KIRDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADAG 73
Query: 518 TIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHL--HG 573
+ ++ E+++L + H +I+ G C + G LV E++P G+L D+L H
Sbjct: 74 PQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS 130
Query: 574 -GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLT 632
GL+ L L + Q +G+ YLH A IHRD+ N+LLD+D +I DFGL
Sbjct: 131 IGLAQL-----LLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
Query: 633 S------------------------CERDLTTDMKSDVHNFGIVLLEILSGRKAYDIEYV 668
+ C ++ SDV +FG+ L E+L+ D
Sbjct: 183 AVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT---HCDSSQS 239
Query: 669 PP-------GIVEWALPLIKQGKAAAIIDRNVALPR 697
PP GI + + ++ + +++R LPR
Sbjct: 240 PPTKFLELIGIAQGQMTVL---RLTELLERGERLPR 272
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAVL-VDGRQVAVKRANAATIIHTNIREFEMELEVLCNI 537
D + ++ +G G+YG V A + G+QVA+K+ A + TN + EL++L +
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF 110
Query: 538 RHSNIV---NLLGYCLEMGERLLVYEFMP--RGTLHDHLHGGLSPLNWSLRLKISMQAAK 592
+H NI+ ++L + GE VY + LH +H PL Q +
Sbjct: 111 KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS-QPLTLEHVRYFLYQLLR 169
Query: 593 GLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
GL+Y+H + +IHRD+K N+L++ + +I DFG+
Sbjct: 170 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGM 204
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHGG--------LSP-------LNWSLRLKIS 587
NLLG C + G L+V EF G L +L ++P L + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER----------- 636
Q AKG+E+L A+ IHRD+ NILL +I DFGL +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 637 ------------DLTTDMKSDVHNFGIVLLEILS 658
D ++SDV +FG++L EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H +IH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCHSKR---VIH 132
Query: 608 RDVKTLNILLDSDWGARIADFGL---LTSCERDLTT----------------DMKSDVHN 648
RD+K N+LL S +IADFG S R + D K D+ +
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWS 192
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 193 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 240
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 241 --------LLKHNPSQRPMLREV 255
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G +G V +AV +D + A ++ + E ++ E+E++ I +H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+NLLG C + G ++ E+ +G L ++L P + + +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ + +IADFGL
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG+++ EI + G Y PGI VE L+K
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY------PGIPVEELFKLLK 260
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G +D+ P N L+ + A+ PS+ PT Q+ L++I+
Sbjct: 261 EGHR---MDK----PANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIL 304
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 106/273 (38%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 127
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------- 640
H + +IHRD+K N+LL S +IADFG T
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 641 --DMKSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
D K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 242
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 243 ------------------LLKHNPSQRPMLREV 257
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 38/198 (19%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN----IREFEMELEVLCNIRHSNIVN 544
ELG G++G VYKA ++ +V AA +I T + ++ +E+++L + H NIV
Sbjct: 44 ELGDGAFGKVYKA---QNKETSV--LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 545 LLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPP 604
LL ++ EF G + + PL S + Q L YLH +
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK--- 155
Query: 605 IIHRDVKTLNILLDSDWGARIADFGL------------------------LTSCE--RDL 638
IIHRD+K NIL D ++ADFG+ + CE +D
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 639 TTDMKSDVHNFGIVLLEI 656
D K+DV + GI L+E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 38/198 (19%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN----IREFEMELEVLCNIRHSNIVN 544
ELG G++G VYKA ++ +V AA +I T + ++ +E+++L + H NIV
Sbjct: 44 ELGDGAFGKVYKA---QNKETSV--LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 545 LLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPP 604
LL ++ EF G + + PL S + Q L YLH +
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK--- 155
Query: 605 IIHRDVKTLNILLDSDWGARIADFGL------------------------LTSCE--RDL 638
IIHRD+K NIL D ++ADFG+ + CE +D
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 639 TTDMKSDVHNFGIVLLEI 656
D K+DV + GI L+E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 38/198 (19%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN----IREFEMELEVLCNIRHSNIVN 544
ELG G++G VYKA ++ +V AA +I T + ++ +E+++L + H NIV
Sbjct: 44 ELGDGAFGKVYKA---QNKETSV--LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 545 LLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPP 604
LL ++ EF G + + PL S + Q L YLH +
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK--- 155
Query: 605 IIHRDVKTLNILLDSDWGARIADFGL------------------------LTSCE--RDL 638
IIHRD+K NIL D ++ADFG+ + CE +D
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 639 TTDMKSDVHNFGIVLLEI 656
D K+DV + GI L+E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G +G V +AV +D + A ++ + E ++ E+E++ I +H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+NLLG C + G ++ E+ +G L ++L P + + +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ + +IADFGL
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG+++ EI + G Y PGI VE L+K
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY------PGIPVEELFKLLK 262
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G +D+ P N L+ + A+ PS+ PT Q+ L++I+
Sbjct: 263 EGHR---MDK----PANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIL 306
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 102/263 (38%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H +IH
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCHSKR---VIH 133
Query: 608 RDVKTLNILLDSDWGARIADFG-------------------LLTSCERDLTTDMKSDVHN 648
RD+K N+LL S +IADFG L D K D+ +
Sbjct: 134 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWS 193
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 194 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 241
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 242 --------LLKHNPSQRPMLREV 256
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 26/202 (12%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
D F + + +G+GS+G VYK + ++V + I + + E+ VL
Sbjct: 16 DPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 75
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
I G L+ + ++ E++ G+ D L G PL + I + KGL+YLH
Sbjct: 76 SPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG--PLEETYIATILREILKGLDYLH 133
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGL---LTSCE------------------RD 637
+ IHRD+K N+LL ++ADFG+ LT + +
Sbjct: 134 SERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 638 LTTDMKSDVHNFGIVLLEILSG 659
D K+D+ + GI +E+ G
Sbjct: 191 SAYDFKADIWSLGITAIELAKG 212
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 107/273 (39%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNI-REFEMELEVLCNI 537
A F+ LG+G +G VY A + + + A+K A + + + E+E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 124
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFG-------------------LLTSCERDL 638
H + +IHRD+K N+LL S +IADFG L
Sbjct: 125 H---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 639 TTDMKSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
D K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISR-- 239
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 240 ------------------LLKHNPSQRPMLREV 254
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 91/213 (42%), Gaps = 47/213 (22%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHGGLSP--------------LNWSLRLKISM 588
NLLG C + G L+V EF G L +L + L + S
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 589 QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER------------ 636
Q AKG+E+L A+ IHRD+ NILL +I DFGL +
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 637 -----------DLTTDMKSDVHNFGIVLLEILS 658
D ++SDV +FG++L EI S
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G+G++ V A ++ GR+VAVK + + T++++ E+ ++ + H NIV L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 549 CLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
LV E+ G + D+L HG + + + Q ++Y H+ I+
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKY---IV 136
Query: 607 HRDVKTLNILLDSDWGARIADFGL 630
HRD+K N+LLD D +IADFG
Sbjct: 137 HRDLKAENLLLDGDMNIKIADFGF 160
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G +G V +AV +D + A ++ + E ++ E+E++ I +H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+NLLG C + G ++ E+ +G L ++L P + + +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ + +IADFGL
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG+++ EI + G Y PGI VE L+K
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY------PGIPVEELFKLLK 265
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G + P N L+ + A+ PS+ PT Q+ L++I+
Sbjct: 266 EG-------HRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIL 309
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHGG--------LSP-------LNWSLRLKIS 587
NLLG C + G L+V EF G L +L ++P L + S
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER----------- 636
Q AKG+E+L A+ IHRD+ NILL +I DFGL +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 637 ------------DLTTDMKSDVHNFGIVLLEILS 658
D ++SDV +FG++L EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
++ +G+G++ V A ++ GR+VA+K + + T++++ E+ ++ + H NI
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L L+ E+ G + D+L HG + + + Q ++Y H+
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK 133
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
I+HRD+K N+LLD+D +IADFG
Sbjct: 134 R---IVHRDLKAENLLLDADMNIKIADFGF 160
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 544 NLLGYCLEMGERLLVY-EFMPRGTLHDHLHGG--------LSP-------LNWSLRLKIS 587
NLLG C + G L+V EF G L +L ++P L + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER----------- 636
Q AKG+E+L A+ IHRD+ NILL +I DFGL +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 637 ------------DLTTDMKSDVHNFGIVLLEILS 658
D ++SDV +FG++L EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHGG--------LSP-------LNWSLRLKIS 587
NLLG C + G L+V EF G L +L ++P L + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER----------- 636
Q AKG+E+L A+ IHRD+ NILL +I DFGL +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 637 ------------DLTTDMKSDVHNFGIVLLEILS 658
D ++SDV +FG++L EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 102/263 (38%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H +IH
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCHSKR---VIH 133
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------DMKSDVHN 648
RD+K N+LL S +IA+FG T D K D+ +
Sbjct: 134 RDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 193
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 194 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 241
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 242 --------LLKHNPSQRPMLREV 256
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
++ +G+G++ V A ++ GR+VA+K + + T++++ E+ ++ + H NI
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L L+ E+ G + D+L HG + + + Q ++Y H+
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK 130
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
I+HRD+K N+LLD+D +IADFG
Sbjct: 131 R---IVHRDLKAENLLLDADMNIKIADFGF 157
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 544 NLLGYCLEMGERLLVY-EFMPRGTLHDHLHGG--------LSP-------LNWSLRLKIS 587
NLLG C + G L+V EF G L +L ++P L + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD---------- 637
Q AKG+E+L A+ IHRD+ NILL +I DFGL +D
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 638 -------------LTTDMKSDVHNFGIVLLEILS 658
++SDV +FG++L EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNI-REFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 121
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------- 640
H +IHRD+K N+LL S +IADFG T
Sbjct: 122 HSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 178
Query: 641 --DMKSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
D K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 179 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 236
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 237 ------------------LLKHNPSQRPMLREV 251
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHGG--------LSP-------LNWSLRLKIS 587
NLLG C + G L+V EF G L +L ++P L + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD---------- 637
Q AKG+E+L A+ IHRD+ NILL +I DFGL +D
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 638 -------------LTTDMKSDVHNFGIVLLEILS 658
++SDV +FG++L EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 468 MAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLV-DGRQVAVKRANAATIIHTNIRE 526
+A++F+ +EL+ + LG G +G V+K V + +G + + + +
Sbjct: 24 LARIFKETELR-------KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQS 76
Query: 527 FEM---ELEVLCNIRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSL 582
F+ + + ++ H++IV LLG C G L LV +++P G+L DH+ L L
Sbjct: 77 FQAVTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQL 134
Query: 583 RLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
L +Q AKG+ YL + ++HR++ N+LL S ++ADFG+
Sbjct: 135 LLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGV 179
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 99/247 (40%), Gaps = 32/247 (12%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEM--ELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + + T + E ++ E+E+ ++RH NI+ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H + +IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQ-KLSRFDEQRTATYITELANALSYCH---SKRVIH 135
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------DMKSDVHN 648
RD+K N+LL S+ +IADFG T D K D+ +
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 195
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G Y Y VE+ P A +I R L N
Sbjct: 196 LGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISR--LLKHNASQRL 253
Query: 704 KLADIAE 710
LA++ E
Sbjct: 254 TLAEVLE 260
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHGG--------LSP-------LNWSLRLKIS 587
NLLG C + G L+V EF G L +L ++P L + S
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD---------- 637
Q AKG+E+L A+ IHRD+ NILL +I DFGL +D
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 638 -------------LTTDMKSDVHNFGIVLLEILS 658
++SDV +FG++L EI S
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 65
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+EF+ + L+ + L Q +GL +
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVLL-- 654
H ++HRD+K N+L++++ ++ADFGL R +++ H +V L
Sbjct: 126 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL----ARAFGVPVRTYTHE--VVTLWY 176
Query: 655 ---EILSGRKAY 663
EIL G K Y
Sbjct: 177 RAPEILLGXKYY 188
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 91/214 (42%), Gaps = 48/214 (22%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHGGLSP---------------LNWSLRLKIS 587
NLLG C + G L+V EF G L +L + L + S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD---------- 637
Q AKG+E+L A+ IHRD+ NILL +I DFGL +D
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 638 -------------LTTDMKSDVHNFGIVLLEILS 658
++SDV +FG++L EI S
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 544 NLLGYCLEMGERLLVY-EFMPRGTLHDHLHGG--------LSP-------LNWSLRLKIS 587
NLLG C + G L+V EF G L +L ++P L + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD---------- 637
Q AKG+E+L A+ IHRD+ NILL +I DFGL +D
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 638 -------------LTTDMKSDVHNFGIVLLEILS 658
++SDV +FG++L EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 468 MAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLV-DGRQVAVKRANAATIIHTNIRE 526
+A++F+ +EL+ + LG G +G V+K V + +G + + + +
Sbjct: 6 LARIFKETELR-------KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQS 58
Query: 527 FEM---ELEVLCNIRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSL 582
F+ + + ++ H++IV LLG C G L LV +++P G+L DH+ L L
Sbjct: 59 FQAVTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQL 116
Query: 583 RLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
L +Q AKG+ YL + ++HR++ N+LL S ++ADFG+
Sbjct: 117 LLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGV 161
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 44/201 (21%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN----IREFEMELEVLCNIRHSNIVN 544
ELG G++G VYKA + +A AA +I T + ++ +E+E+L H IV
Sbjct: 18 ELGDGAFGKVYKAKNKETGALA-----AAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 545 LLGYCLEMGERLLVYEFMPRGTLHD---HLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
LLG G+ ++ EF P G + L GL+ + + Q + L +LH
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLHSKR 129
Query: 602 APPIIHRDVKTLNILLDSDWGARIADFGL------------------------LTSCE-- 635
IIHRD+K N+L+ + R+ADFG+ + CE
Sbjct: 130 ---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 636 RDLTTDMKSDVHNFGIVLLEI 656
+D D K+D+ + GI L+E+
Sbjct: 187 KDTPYDYKADIWSLGITLIEM 207
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 124
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFG-------------------LLTSCERDL 638
H +IHRD+K N+LL S +IADFG L
Sbjct: 125 HSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGR 181
Query: 639 TTDMKSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
D K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 239
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 240 ------------------LLKHNPSQRPMLREV 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G +G V +AV +D + A ++ + E ++ E+E++ I +H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+NLLG C + G ++ E+ +G L ++L P + + +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ + +IADFGL
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG+++ EI + G Y PGI VE L+K
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY------PGIPVEELFKLLK 319
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G +D+ P N L+ + A+ PS+ PT Q+ L++I+
Sbjct: 320 EGHR---MDK----PANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIL 363
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 124
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFG-------------------LLTSCERDL 638
H +IHRD+K N+LL S +IADFG L
Sbjct: 125 HSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 639 TTDMKSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
D K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 239
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 240 ------------------LLKHNPSQRPMLREV 254
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 58
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 119 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 151
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 56
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 117 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 56
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKG 593
+ H NIV LL + LV+EF+ L D + L+ + L Q +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
L + H ++HRD+K N+L++++ ++ADFGL
Sbjct: 116 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGL 149
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 44/201 (21%)
Query: 489 ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN----IREFEMELEVLCNIRHSNIVN 544
ELG G++G VYKA + +A AA +I T + ++ +E+E+L H IV
Sbjct: 26 ELGDGAFGKVYKAKNKETGALA-----AAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 545 LLGYCLEMGERLLVYEFMPRGTLHD---HLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
LLG G+ ++ EF P G + L GL+ + + Q + L +LH
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLHSKR 137
Query: 602 APPIIHRDVKTLNILLDSDWGARIADFGL------------------------LTSCE-- 635
IIHRD+K N+L+ + R+ADFG+ + CE
Sbjct: 138 ---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 636 RDLTTDMKSDVHNFGIVLLEI 656
+D D K+D+ + GI L+E+
Sbjct: 195 KDTPYDYKADIWSLGITLIEM 215
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 59
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 58
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 119 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 151
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 58
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+EF+ + L+ + L Q +GL +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVLL-- 654
H ++HRD+K N+L++++ ++ADFGL R +++ H +V L
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL----ARAFGVPVRTYTHE--VVTLWY 169
Query: 655 ---EILSGRKAY 663
EIL G K Y
Sbjct: 170 RAPEILLGXKYY 181
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 45/268 (16%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
LG G +G V+ +VA+K T+ + E E +++ ++H +V L
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLE---EAQIMKKLKHDKLVQLYA 71
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGL-SPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
E +V E+M +G+L D L G L + ++ Q A G+ Y+ + I
Sbjct: 72 VVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YI 127
Query: 607 HRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKS 644
HRD+++ NIL+ + +IADFGL E + T +KS
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 645 DVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
DV +FGI+L E+++ GR Y P + + ++R +P +
Sbjct: 188 DVWSFGILLTELVTKGRVPY--------------PGMNNREVLEQVERGYRMPCPQDCPI 233
Query: 704 KLADIAELAIRENPSELPTMSQVATWLE 731
L ++ +++P E PT + ++LE
Sbjct: 234 SLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 59
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKG 593
+ H NIV LL + LV+EF+ L D + L+ + L Q +G
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
L + H ++HRD+K N+L++++ ++ADFGL
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 59
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 56
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 117 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 60
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 121 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 153
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 56
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 117 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 106/273 (38%), Gaps = 50/273 (18%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNI 537
A F+ LG+G +G VY A + + A+K A + + + E+E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L GY + L+ E+ P GT++ L LS + + A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 127
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFG-------------------LLTSCERDL 638
H + +IHRD+K N+LL S +IADFG L
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGR 184
Query: 639 TTDMKSDVHNFGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNV 693
D K D+ + G++ E L G+ Y Y VE+ P A +I R
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR-- 242
Query: 694 ALPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 243 ------------------LLKHNPSQRPMLREV 257
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 58
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKG 593
+ H NIV LL + LV+EF+ L D + L+ + L Q +G
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
L + H ++HRD+K N+L++++ ++ADFGL
Sbjct: 118 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 151
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 58
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+EF+ + L+ + L Q +GL +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H ++HRD+K N+L++++ ++ADFGL
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 65
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+EF+ + L+ + L Q +GL +
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H ++HRD+K N+L++++ ++ADFGL
Sbjct: 126 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 156
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 57
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 118 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 150
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 57
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 118 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 150
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 56
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 117 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 58
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 119 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGL 151
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 58
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+EF+ + L+ + L Q +GL +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H ++HRD+K N+L++++ ++ADFGL
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 57
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+EF+ + L+ + L Q +GL +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H ++HRD+K N+L++++ ++ADFGL
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 57
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+EF+ + L+ + L Q +GL +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H ++HRD+K N+L++++ ++ADFGL
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 58
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+EF+ + L+ + L Q +GL +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H ++HRD+K N+L++++ ++ADFGL
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 464 ACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVL----VDGRQVAVKRANAATI 519
A PGM + D G + LG+GS+G V +L + G++ AVK + +
Sbjct: 35 ATPGMFVQHSTAIFSDRYKGQRV---LGKGSFGEV---ILCKDKITGQECAVKVISKRQV 88
Query: 520 IHTNIRE-FEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLS 576
+E E+++L + H NI+ L + + G LV E G L D + S
Sbjct: 89 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 148
Query: 577 PLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFGLLTS 633
++ + +I Q G+ Y+HK+ I+HRD+K N+LL+S D RI DFGL T
Sbjct: 149 EVDAA---RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 202
Query: 634 CE-----RDL--------------TTDMKSDVHNFGIVLLEILS------GRKAYDI-EY 667
E +D T D K DV + G++L +LS G YDI +
Sbjct: 203 FEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK 262
Query: 668 VPPGIVEWALPLIKQGKAAA 687
V G + LP K+ +A
Sbjct: 263 VEKGKYTFELPQWKKVSESA 282
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 57
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+EF+ + L+ + L Q +GL +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H ++HRD+K N+L++++ ++ADFGL
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 59
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+EF+ + L+ + L Q +GL +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H ++HRD+K N+L++++ ++ADFGL
Sbjct: 120 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 150
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 477 LKDATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMEL 531
L D N F++ ++G G+YG VYKA + G VA+K+ T + T IRE +
Sbjct: 3 LVDMEN-FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----I 57
Query: 532 EVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAA 591
+L + H NIV LL + LV+EF+ + L+ + L Q
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+GL + H ++HRD+K N+L++++ ++ADFGL
Sbjct: 118 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 153
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAVLV----DGRQVAVKRANAATIIHTNIREFEMELEVL 534
+ + ++G GS+G KA+LV DGRQ +K N + + E E+ VL
Sbjct: 21 QSMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL 77
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR-LKISMQAAKG 593
N++H NIV E G +V ++ G L ++ L + L +Q
Sbjct: 78 ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA 137
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
L+++H I+HRD+K+ NI L D ++ DFG+
Sbjct: 138 LKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGI 171
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +AV +D + A ++ + E ++ E+E++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I++LLG C + G ++ E+ +G L ++L P + + +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ + +IADFGL
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG+++ EI + G Y PGI VE L+K
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY------PGIPVEELFKLLK 273
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G + P N L+ + A+ PS+ PT Q+ L++I+
Sbjct: 274 EG-------HRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIL 317
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 57
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 118 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGL 150
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 464 ACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVL----VDGRQVAVKRANAATI 519
A PGM + D G + LG+GS+G V +L + G++ AVK + +
Sbjct: 34 ATPGMFVQHSTAIFSDRYKGQRV---LGKGSFGEV---ILCKDKITGQECAVKVISKRQV 87
Query: 520 IHTNIRE-FEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLS 576
+E E+++L + H NI+ L + + G LV E G L D + S
Sbjct: 88 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 147
Query: 577 PLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFGLLTS 633
++ + +I Q G+ Y+HK+ I+HRD+K N+LL+S D RI DFGL T
Sbjct: 148 EVDAA---RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 201
Query: 634 CE-----RDL--------------TTDMKSDVHNFGIVLLEILS------GRKAYDI-EY 667
E +D T D K DV + G++L +LS G YDI +
Sbjct: 202 FEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK 261
Query: 668 VPPGIVEWALPLIKQGKAAA 687
V G + LP K+ +A
Sbjct: 262 VEKGKYTFELPQWKKVSESA 281
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 57
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+EF+ + L+ + L Q +GL +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H ++HRD+K N+L++++ ++ADFGL
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 464 ACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVL----VDGRQVAVKRANAATI 519
A PGM + D G + LG+GS+G V +L + G++ AVK + +
Sbjct: 11 ATPGMFVQHSTAIFSDRYKGQRV---LGKGSFGEV---ILCKDKITGQECAVKVISKRQV 64
Query: 520 IHTNIRE-FEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLS 576
+E E+++L + H NI+ L + + G LV E G L D + S
Sbjct: 65 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 124
Query: 577 PLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFGLLTS 633
++ + +I Q G+ Y+HK+ I+HRD+K N+LL+S D RI DFGL T
Sbjct: 125 EVDAA---RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178
Query: 634 CE-----RDL--------------TTDMKSDVHNFGIVLLEILS------GRKAYDI-EY 667
E +D T D K DV + G++L +LS G YDI +
Sbjct: 179 FEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK 238
Query: 668 VPPGIVEWALPLIKQGKAAA 687
V G + LP K+ +A
Sbjct: 239 VEKGKYTFELPQWKKVSESA 258
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 59
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ + L+ + L Q +GL
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
++ +G+G++ V A ++ G++VAVK + + +++++ E+ ++ + H NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L LV E+ G + D+L HG + + + Q ++Y H+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK 132
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
I+HRD+K N+LLD+D +IADFG
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGF 159
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +AV +D + A ++ + E ++ E+E++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+ LLG C + G ++ E+ +G L ++L P + + +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ + +IADFGL
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG+++ EI + G Y PGI VE L+K
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY------PGIPVEELFKLLK 273
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G + P N L+ + A+ PS+ PT Q+ L++I+
Sbjct: 274 EG-------HRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIL 317
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 102/263 (38%), Gaps = 50/263 (19%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + A+K A + + + E+E+ ++RH NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
Y + L+ E+ P GT++ L LS + + A L Y H +IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCHSKR---VIH 134
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------DMKSDVHN 648
RD+K N+LL S +IA+FG T D K D+ +
Sbjct: 135 RDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 649 FGIVLLEILSGR-----KAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVEPLF 703
G++ E L G+ Y Y VE+ P A +I R
Sbjct: 195 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------------ 242
Query: 704 KLADIAELAIRENPSELPTMSQV 726
++ NPS+ P + +V
Sbjct: 243 --------LLKHNPSQRPMLREV 257
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +AV +D + A ++ + E ++ E+E++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+NLLG C + G ++ + +G L ++L P + + +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ + +IADFGL
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG+++ EI + G Y PGI VE L+K
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY------PGIPVEELFKLLK 273
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G +D+ P N L+ + A+ PS+ PT Q+ L++I+
Sbjct: 274 EGHR---MDK----PANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIL 317
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 113/279 (40%), Gaps = 51/279 (18%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
LG+G +G K + +V V + T R F E++V+ + H N++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ-RTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 550 LEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRD 609
+ + E++ GTL + S WS R+ + A G+ YLH + IIHRD
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRD 133
Query: 610 VKTLNILLDSDWGARIADFGL----------------LTSCERD---------------- 637
+ + N L+ + +ADFGL L +R
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 638 ---LTTDMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVA 694
+ D K DV +FGIVL EI+ GR D +Y+ P +++ L +DR
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEII-GRVNADPDYL-PRTMDFGL------NVRGFLDR--Y 243
Query: 695 LPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQI 733
P N P F I +P + P+ ++ WLE +
Sbjct: 244 CPPNCPPSF--FPITVRCCDLDPEKRPSFVKLEHWLETL 280
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GSYG V K D GR VA+K+ + + E+++L +RH N+VNLL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHR 608
C + LV+EF+ T+ D L + L++ + K Q G+ + H + IIHR
Sbjct: 93 CKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHR 148
Query: 609 DVKTLNILLDSDWGARIADFGL 630
D+K NIL+ ++ DFG
Sbjct: 149 DIKPENILVSQSGVVKLCDFGF 170
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
++ +G+G++ V A ++ G++VAVK + + +++++ E+ ++ + H NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L LV E+ G + D+L HG + + + Q ++Y H+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK 132
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
I+HRD+K N+LLD+D +IADFG
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGF 159
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
++ +G+G++ V A ++ G++VAVK + + +++++ E+ ++ + H NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L LV E+ G + D+L HG + + + Q ++Y H+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK 132
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
I+HRD+K N+LLD+D +IADFG
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGF 159
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 59
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ L+ + L Q +GL
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 120 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGL 152
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 490 LGRGSYGFVYKAVLVDGRQ-VAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G G+ V A ++ VA+KR N T++ E E++ + H NIV+
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-------LNWSLRLKISMQAAKGLEYLHKDA 601
+ E LV + + G++ D + ++ L+ S I + +GLEYLHK+
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 136
Query: 602 APPIIHRDVKTLNILLDSDWGARIADFGLL--------------------TSC------- 634
IHRDVK NILL D +IADFG+ T C
Sbjct: 137 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 193
Query: 635 ERDLTTDMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVA 694
E+ D K+D+ +FGI +E+ +G Y +Y P ++ L + D+ +
Sbjct: 194 EQVRGYDFKADIWSFGITAIELATGAAPYH-KYPPMKVLMLTLQNDPPSLETGVQDKEM- 251
Query: 695 LPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
L + + K+ L ++++P + PT +++
Sbjct: 252 LKKYGKSFRKMIS---LCLQKDPEKRPTAAEL 280
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 57
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+EF+ L+ + L Q +GL
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 118 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGL 150
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 31/208 (14%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
D + F ++G+G+ G VY A+ + G++VA+++ N + +E + E+ V+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRE 73
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
++ NIVN L L E +V E++ G+L D + + ++ + + + LE+
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEF 131
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL--LTSCERDLTTDM------------ 642
LH + +IHRD+K+ NILL D ++ DFG + E+ ++M
Sbjct: 132 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV 188
Query: 643 -------KSDVHNFGIVLLEILSGRKAY 663
K D+ + GI+ +E++ G Y
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 490 LGRGSYGFVYKAVLVDGRQ-VAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G G+ V A ++ VA+KR N T++ E E++ + H NIV+
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSP-------LNWSLRLKISMQAAKGLEYLHKDA 601
+ E LV + + G++ D + ++ L+ S I + +GLEYLHK+
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141
Query: 602 APPIIHRDVKTLNILLDSDWGARIADFGLL--------------------TSC------- 634
IHRDVK NILL D +IADFG+ T C
Sbjct: 142 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198
Query: 635 ERDLTTDMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVA 694
E+ D K+D+ +FGI +E+ +G Y +Y P ++ L + D+ +
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATGAAPYH-KYPPMKVLMLTLQNDPPSLETGVQDKEM- 256
Query: 695 LPRNVEPLFKLADIAELAIRENPSELPTMSQV 726
L + + K+ L ++++P + PT +++
Sbjct: 257 LKKYGKSFRKMIS---LCLQKDPEKRPTAAEL 285
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 487 FNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
ELG+GS+G VY+ D +VAVK N + + I EF E V+
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCH 80
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG---------GLSPLNWSLRLKISMQAA 591
++V LLG + L+V E M G L +L G P ++++ + A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE---------------- 635
G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 636 -------RDLTTDMKSDVHNFGIVLLEILS 658
+D SD+ +FG+VL EI S
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 38/221 (17%)
Query: 490 LGRGSYGFVYK-AVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
LG+GS+G V K + ++ AVK N A+ + + E+E+L + H NI+ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 549 CLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ +V E G L D + S + + +I Q G+ Y+HK I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITYMHKHN---IV 143
Query: 607 HRDVKTLNILLDS---DWGARIADFGLLTSCERDL-------------------TTDMKS 644
HRD+K NILL+S D +I DFGL T +++ T D K
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKC 203
Query: 645 DVHNFGIVLLEILS------GRKAYDI-EYVPPGIVEWALP 678
DV + G++L +LS G+ YDI + V G + LP
Sbjct: 204 DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP 244
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 487 FNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
ELG+GS+G VY+ D +VAVK N + + I EF E V+
Sbjct: 19 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCH 77
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG---------GLSPLNWSLRLKISMQAA 591
++V LLG + L+V E M G L +L G P ++++ + A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE---------------- 635
G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 138 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 636 -------RDLTTDMKSDVHNFGIVLLEILS 658
+D SD+ +FG+VL EI S
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 487 FNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
ELG+GS+G VY+ D +VAVK N + + I EF E V+
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCH 80
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG---------GLSPLNWSLRLKISMQAA 591
++V LLG + L+V E M G L +L G P ++++ + A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE---------------- 635
G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 636 -------RDLTTDMKSDVHNFGIVLLEILS 658
+D SD+ +FG+VL EI S
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 107/234 (45%), Gaps = 45/234 (19%)
Query: 490 LGRGSYGFVYKAVL----VDGRQVAVKRANAATIIHTNIRE-FEMELEVLCNIRHSNIVN 544
LG+GS+G V +L + G++ AVK + + +E E+++L + H NI+
Sbjct: 40 LGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 545 LLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKDAA 602
L + + G LV E G L D + S ++ + +I Q G+ Y+HK+
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMHKNK- 152
Query: 603 PPIIHRDVKTLNILLDS---DWGARIADFGLLTSCE-----RDL--------------TT 640
I+HRD+K N+LL+S D RI DFGL T E +D T
Sbjct: 153 --IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 210
Query: 641 DMKSDVHNFGIVLLEILS------GRKAYDI-EYVPPGIVEWALPLIKQGKAAA 687
D K DV + G++L +LS G YDI + V G + LP K+ +A
Sbjct: 211 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA 264
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 68/294 (23%)
Query: 490 LGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIREFEM-----ELEVLCNI-RHSN 541
LG G++G V +AV +D + A ++ + E ++ E+E++ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSP---------------LNWSLRLKI 586
I+NLLG C + G ++ + +G L ++L P + + +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER---------- 636
+ Q A+G+EYL A+ IHRD+ N+L+ + +IADFGL
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 637 -------------DLTTDMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGI-VEWALPLIK 681
D +SDV +FG+++ EI + G Y PGI VE L+K
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY------PGIPVEELFKLLK 273
Query: 682 QGKAAAIIDRNVALPRN-VEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+G + P N L+ + A+ PS+ PT Q+ L++I+
Sbjct: 274 EG-------HRMDKPANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLDRIL 317
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 38/221 (17%)
Query: 490 LGRGSYGFVYK-AVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
LG+GS+G V K + ++ AVK N A+ + + E+E+L + H NI+ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 549 CLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ +V E G L D + S + + +I Q G+ Y+HK I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITYMHKHN---IV 143
Query: 607 HRDVKTLNILLDS---DWGARIADFGLLTSCERDL-------------------TTDMKS 644
HRD+K NILL+S D +I DFGL T +++ T D K
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKC 203
Query: 645 DVHNFGIVLLEILS------GRKAYDI-EYVPPGIVEWALP 678
DV + G++L +LS G+ YDI + V G + LP
Sbjct: 204 DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP 244
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 38/221 (17%)
Query: 490 LGRGSYGFVYK-AVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
LG+GS+G V K + ++ AVK N A+ + + E+E+L + H NI+ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 549 CLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ +V E G L D + S + + +I Q G+ Y+HK I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITYMHK---HNIV 143
Query: 607 HRDVKTLNILLDS---DWGARIADFGLLTSCERDL-------------------TTDMKS 644
HRD+K NILL+S D +I DFGL T +++ T D K
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKC 203
Query: 645 DVHNFGIVLLEILS------GRKAYDI-EYVPPGIVEWALP 678
DV + G++L +LS G+ YDI + V G + LP
Sbjct: 204 DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP 244
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 18/149 (12%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
+G GS+G V++A LV+ +VA+K+ + + R EL+++ ++H N+V+L +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKK------VLQDKRFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 550 LEMGERL------LVYEFMPRGTLHDHLH-GGLSPLNWSLRLKISM-QAAKGLEYLHKDA 601
G++ LV E++P H L L +K+ M Q + L Y+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG 161
Query: 602 APPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD G ++ DFG
Sbjct: 162 ---ICHRDIKPQNLLLDPPSGVLKLIDFG 187
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 12/150 (8%)
Query: 489 ELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIR-HSNIVNLL 546
+LG+G+YG V+K++ G VAVK+ A T+ + E+ +L + H NIVNLL
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 547 GYCLEMGER--LLVYEFMPRGTLHDHLHGG-LSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
+R LV+++M LH + L P++ + + Q K ++YLH
Sbjct: 76 NVLRADNDRDVYLVFDYM-ETDLHAVIRANILEPVH---KQYVVYQLIKVIKYLHSGG-- 129
Query: 604 PIIHRDVKTLNILLDSDWGARIADFGLLTS 633
++HRD+K NILL+++ ++ADFGL S
Sbjct: 130 -LLHRDMKPSNILLNAECHVKVADFGLSRS 158
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 42/228 (18%)
Query: 469 AQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHT 522
+ VF E + + ELG+GS+G VY+ D +VAVK N + +
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 523 NIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG--------- 573
I EF E V+ ++V LLG + L+V E M G L +L
Sbjct: 64 RI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
G P ++++ + A G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 634 CE-----------------------RDLTTDMKSDVHNFGIVLLEILS 658
+D SD+ +FG+VL EI S
Sbjct: 180 IYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 42/228 (18%)
Query: 469 AQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHT 522
+ VF E + + ELG+GS+G VY+ D +VAVK N + +
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 523 NIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG--------- 573
I EF E V+ ++V LLG + L+V E M G L +L
Sbjct: 64 RI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
G P ++++ + A G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 634 CE-----------------------RDLTTDMKSDVHNFGIVLLEILS 658
+D SD+ +FG+VL EI S
Sbjct: 180 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
++ +G+G++ V A ++ G++VAV+ + + +++++ E+ ++ + H NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L LV E+ G + D+L HG + + + Q ++Y H+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK 132
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
I+HRD+K N+LLD+D +IADFG
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGF 159
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 36/211 (17%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSN- 541
K+ E+GRG+YG V K V G+ +AVKR + T+ ++ M+L+V+ +R S+
Sbjct: 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRS-TVDEKEQKQLLMDLDVV--MRSSDC 80
Query: 542 --IVNLLGYCLEMGERLLVYEFMPRG--TLHDHLHGGLSPLNWSLRL-KISMQAAKGLEY 596
IV G G+ + E M + +++ L + L KI++ K L +
Sbjct: 81 PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFG----LLTSCERDLTT------------ 640
L ++ IIHRD+K NILLD ++ DFG L+ S +
Sbjct: 141 LKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERID 198
Query: 641 --------DMKSDVHNFGIVLLEILSGRKAY 663
D++SDV + GI L E+ +GR Y
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
++ +G+G++ V A ++ G++VAVK + + +++++ E+ ++ + H NI
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L LV E+ G + D+L HG + + + Q ++Y H+
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR---QIVSAVQYCHQK 125
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
I+HRD+K N+LLD+D +IADFG
Sbjct: 126 F---IVHRDLKAENLLLDADMNIKIADFGF 152
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
++ +G+G++ V A ++ G++VAV+ + + +++++ E+ ++ + H NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L LV E+ G + D+L HG + + + Q ++Y H+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK 132
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
I+HRD+K N+LLD+D +IADFG
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGF 159
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 487 FNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
ELG+GS+G VY+ D +VAVK N + + I EF E V+
Sbjct: 21 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCH 79
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG---------GLSPLNWSLRLKISMQAA 591
++V LLG + L+V E M G L +L G P ++++ + A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE---------------- 635
G+ YL+ A +HRD+ N ++ D+ +I DFG+
Sbjct: 140 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 636 -------RDLTTDMKSDVHNFGIVLLEILS 658
+D SD+ +FG+VL EI S
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 38/234 (16%)
Query: 468 MAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR-- 525
+ Q ++ ELKD + F++ +ELG G+ G V+K V ++ +IH I+
Sbjct: 56 LTQKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARK-----LIHLEIKPA 108
Query: 526 ---EFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSL 582
+ EL+VL IV G GE + E M G+L D + + +
Sbjct: 109 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQI 167
Query: 583 RLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL------------ 630
K+S+ KGL YL + I+HRDVK NIL++S ++ DFG+
Sbjct: 168 LGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 225
Query: 631 -----LTSCERDLTT--DMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWAL 677
S ER T ++SD+ + G+ L+E+ GR Y I PP E L
Sbjct: 226 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR--YPIP--PPDAKELEL 275
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNIR 538
+K ++LG G VY L + + +K A A I ++ FE E+ +
Sbjct: 13 YKIVDKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEY 596
H NIV+++ E LV E++ TL +++ HG PL+ + + Q G+++
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKH 126
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS-CERDLT---------------- 639
H I+HRD+K NIL+DS+ +I DFG+ + E LT
Sbjct: 127 AHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ 183
Query: 640 -----TDMKSDVHNFGIVLLEILSGRKAYD 664
TD +D+++ GIVL E+L G ++
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 31/208 (14%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
D + F ++G+G+ G VY A+ + G++VA+++ N + +E + E+ V+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRE 73
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
++ NIVN L L E +V E++ G+L D + + ++ + + + LE+
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEF 131
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL--LTSCERDLTTDM------------ 642
LH + +IHRD+K+ NILL D ++ DFG + E+ + M
Sbjct: 132 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 643 -------KSDVHNFGIVLLEILSGRKAY 663
K D+ + GI+ +E++ G Y
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 463 SACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHT 522
S PGM + D F + ++G+GS+G V+K + ++V +
Sbjct: 8 SGLPGMQNL-----KADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED 62
Query: 523 NIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSL 582
I + + E+ VL + G L+ + ++ E++ G+ D L G PL+ +
Sbjct: 63 EIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQ 120
Query: 583 RLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL---LTSCE---- 635
I + KGL+YLH + IHRD+K N+LL ++ADFG+ LT +
Sbjct: 121 IATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 177
Query: 636 --------------RDLTTDMKSDVHNFGIVLLEILSGR 660
+ D K+D+ + GI +E+ G
Sbjct: 178 XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 31/208 (14%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
D + F ++G+G+ G VY A+ + G++VA+++ N + +E + E+ V+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRE 73
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
++ NIVN L L E +V E++ G+L D + + ++ + + + LE+
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEF 131
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL--LTSCERDLTTDM------------ 642
LH + +IHRD+K+ NILL D ++ DFG + E+ + M
Sbjct: 132 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 188
Query: 643 -------KSDVHNFGIVLLEILSGRKAY 663
K D+ + GI+ +E++ G Y
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 40/185 (21%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
FKE +G G +G V+KA +DG+ ++R + N + E E++ L + H NI
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRR------VKYNNEKAEREVKALAKLDHVNI 67
Query: 543 VNLLG------YCLEMGER-----------------------LLVYEFMPRGTLHDHLHG 573
V+ G Y E + + EF +GTL +
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 574 GL-SPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLT 632
L+ L L++ Q KG++Y+H + +IHRD+K NI L +I DFGL+T
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 633 SCERD 637
S + D
Sbjct: 185 SLKND 189
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 75/163 (46%), Gaps = 23/163 (14%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVDGRQVAVKR---ANAATIIHTNIREFEMELEVLCNIR 538
+ K +GRG YG VYK L D R VAVK AN I+ E + + +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN------EKNIYRVPLME 65
Query: 539 HSNIVNLLGYCLEMG-----ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKG 593
H NI + + E LLV E+ P G+L +L L +W +++ +G
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRG 123
Query: 594 LEYLHKD------AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
L YLH + P I HRD+ + N+L+ +D I+DFGL
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 44/214 (20%)
Query: 490 LGRGSYGFVYKAVLV--DGR--QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNL 545
LG+G +G V +A L DG +VAVK A I ++I EF E + H ++ L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 546 LGYCLEMGER------LLVYEFMPRGTLHDHLHG---GLSPLNWSLR--LKISMQAAKGL 594
+G L + +++ FM G LH L G +P N L+ ++ + A G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL------------------------ 630
EYL ++ IHRD+ N +L D +ADFGL
Sbjct: 151 EYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 631 LTSCERDLTTDMKSDVHNFGIVLLEILS-GRKAY 663
L S +L T + SDV FG+ + EI++ G+ Y
Sbjct: 208 LESLADNLYT-VHSDVWAFGVTMWEIMTRGQTPY 240
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 31/208 (14%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
D + F ++G+G+ G VY A+ + G++VA+++ N + +E + E+ V+
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRE 74
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
++ NIVN L L E +V E++ G+L D + + ++ + + + LE+
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEF 132
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL--LTSCERDLTTDM------------ 642
LH + +IHRD+K+ NILL D ++ DFG + E+ + M
Sbjct: 133 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 189
Query: 643 -------KSDVHNFGIVLLEILSGRKAY 663
K D+ + GI+ +E++ G Y
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+ + T + T IRE + +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE----ISLLKE 58
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+EF+ + L+ + L Q +GL +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H ++HRD+K N+L++++ ++ADFGL
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+ + T + T IRE + +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE----ISLLKE 57
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+EF+ + L+ + L Q +GL +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H ++HRD+K N+L++++ ++ADFGL
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 105/234 (44%), Gaps = 45/234 (19%)
Query: 490 LGRGSYGFVYKAVL----VDGRQVAVKRANAATIIHTNIRE-FEMELEVLCNIRHSNIVN 544
LG+GS+G V +L + G++ AVK + + +E E+++L + H NI
Sbjct: 34 LGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 545 LLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKDAA 602
L + + G LV E G L D + S ++ + +I Q G+ Y HK+
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYXHKN-- 145
Query: 603 PPIIHRDVKTLNILLDS---DWGARIADFGLLTSCE-----RDL--------------TT 640
I+HRD+K N+LL+S D RI DFGL T E +D T
Sbjct: 146 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTY 204
Query: 641 DMKSDVHNFGIVLLEILS------GRKAYDI-EYVPPGIVEWALPLIKQGKAAA 687
D K DV + G++L +LS G YDI + V G + LP K+ +A
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA 258
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 16/150 (10%)
Query: 487 FNELGRGSYGFVYKAVLVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCNIRHSNI 542
++G G+YG VYKA G A+K+ I T IRE + +L ++HSNI
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE----ISILKELKHSNI 62
Query: 543 VNLLGYCLEMGERLLVYEFMPR--GTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L +LV+E + + L D GGL + L +Q G+ Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL---LQLLNGIAYCHDR 119
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++HRD+K N+L++ + +IADFGL
Sbjct: 120 R---VLHRDLKPQNLLINREGELKIADFGL 146
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
Query: 490 LGRGSYGFVYKAVLV--DGR--QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNL 545
LG G +G V + L DG +VAVK I EF E + + H N++ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 546 LGYCLEMGER-----LLVYEFMPRGTLHDH-----LHGGLSPLNWSLRLKISMQAAKGLE 595
LG C+EM + +++ FM G LH + L G + LK + A G+E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 596 YLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
YL + +HRD+ N +L D +ADFGL
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGL 193
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 16/150 (10%)
Query: 487 FNELGRGSYGFVYKAVLVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCNIRHSNI 542
++G G+YG VYKA G A+K+ I T IRE + +L ++HSNI
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE----ISILKELKHSNI 62
Query: 543 VNLLGYCLEMGERLLVYEFMPR--GTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L +LV+E + + L D GGL + L +Q G+ Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL---LQLLNGIAYCHDR 119
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++HRD+K N+L++ + +IADFGL
Sbjct: 120 R---VLHRDLKPQNLLINREGELKIADFGL 146
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 16/150 (10%)
Query: 487 FNELGRGSYGFVYKAVLVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCNIRHSNI 542
++G G+YG VYKA G A+K+ I T IRE + +L ++HSNI
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE----ISILKELKHSNI 62
Query: 543 VNLLGYCLEMGERLLVYEFMPR--GTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L +LV+E + + L D GGL + L +Q G+ Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL---LQLLNGIAYCHDR 119
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++HRD+K N+L++ + +IADFGL
Sbjct: 120 R---VLHRDLKPQNLLINREGELKIADFGL 146
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 26/203 (12%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
D F + ++G+GS+G V+K + ++V + I + + E+ VL
Sbjct: 24 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 83
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ G L+ + ++ E++ G+ D L G PL+ + I + KGL+YLH
Sbjct: 84 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH 141
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGL---LTSCERDLTT--------------- 640
+ IHRD+K N+LL ++ADFG+ LT + T
Sbjct: 142 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 641 ---DMKSDVHNFGIVLLEILSGR 660
D K+D+ + GI +E+ G
Sbjct: 199 SAYDSKADIWSLGITAIELARGE 221
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 487 FNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
ELG+GS+G VY+ D +VAVK N + + I EF E V+
Sbjct: 23 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCH 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG---------GLSPLNWSLRLKISMQAA 591
++V LLG + L+V E M G L +L G P ++++ + A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE---------------- 635
G+ YL+ A +HR++ N ++ D+ +I DFG+
Sbjct: 142 DGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 636 -------RDLTTDMKSDVHNFGIVLLEILS 658
+D SD+ +FG+VL EI S
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVL 534
+ F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 59
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H NIV LL + LV+E + + L+ + L Q +GL
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ H ++HRD+K N+L++++ ++ADFGL
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 26/203 (12%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
D F + ++G+GS+G V+K + ++V + I + + E+ VL
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ G L+ + ++ E++ G+ D L G PL+ + I + KGL+YLH
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH 121
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGL---LTSCERDLTT--------------- 640
+ IHRD+K N+LL ++ADFG+ LT + T
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 641 ---DMKSDVHNFGIVLLEILSGR 660
D K+D+ + GI +E+ G
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 488 NELGRGSYGFV-YKAVLVDGRQVAVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNL 545
+ LG G++G V + G +VAVK N I ++ + + E++ L RH +I+ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 546 LGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
+ +V E++ G L D++ HG + + ++ Q ++Y H+
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR---RLFQQILSAVDYCHRHM-- 131
Query: 604 PIIHRDVKTLNILLDSDWGARIADFG----------LLTSC-----------ERDLTTDM 642
++HRD+K N+LLD+ A+IADFG L TSC L
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP 190
Query: 643 KSDVHNFGIVLLEILSGRKAYDIEYVP 669
+ D+ + G++L +L G +D E+VP
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 487 FNELGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
ELG+GS+G VY+ D +VAVK N + + I EF E V+
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCH 80
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG---------GLSPLNWSLRLKISMQAA 591
++V LLG + L+V E M G L +L G P ++++ + A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE---------------- 635
G+ YL+ A +HR++ N ++ D+ +I DFG+
Sbjct: 141 DGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 636 -------RDLTTDMKSDVHNFGIVLLEILS 658
+D SD+ +FG+VL EI S
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 474 LSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEM--EL 531
+ + K + F LG+G +G VY A + + + + + E ++ E+
Sbjct: 6 MPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 532 EVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQ 589
E+ ++RH NI+ + Y + L+ EF PRG L+ L HG + ++ +
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---E 122
Query: 590 AAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG 629
A L Y H+ +IHRD+K N+L+ +IADFG
Sbjct: 123 LADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFG 159
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
++ +G+G++ V A ++ G++VAVK + + +++++ E+ + + H NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L LV E+ G + D+L HG + + Q ++Y H+
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR---QIVSAVQYCHQK 132
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
I+HRD+K N+LLD+D +IADFG
Sbjct: 133 F---IVHRDLKAENLLLDADXNIKIADFGF 159
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 26/203 (12%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
D F + ++G+GS+G V+K + ++V + I + + E+ VL
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ G L+ + ++ E++ G+ D L G PL+ + I + KGL+YLH
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH 121
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGL---LTSCE------------------RD 637
+ IHRD+K N+LL ++ADFG+ LT + +
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 638 LTTDMKSDVHNFGIVLLEILSGR 660
D K+D+ + GI +E+ G
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 38/234 (16%)
Query: 468 MAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR-- 525
+ Q ++ ELKD + F++ +ELG G+ G V+K V ++ +IH I+
Sbjct: 21 LTQKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARK-----LIHLEIKPA 73
Query: 526 ---EFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSL 582
+ EL+VL IV G GE + E M G+L D + + +
Sbjct: 74 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQI 132
Query: 583 RLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL------------ 630
K+S+ KGL YL + I+HRDVK NIL++S ++ DFG+
Sbjct: 133 LGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190
Query: 631 -----LTSCERDLTT--DMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWAL 677
S ER T ++SD+ + G+ L+E+ GR Y I PP E L
Sbjct: 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR--YPIP--PPDAKELEL 240
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 29/201 (14%)
Query: 487 FNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
ELG G +G V VA+K ++ EF E +V+ N+ H +V L
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLY 85
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G C + ++ E+M G L ++L L++ + +EYL + +
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 607 HRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKS 644
HRD+ N L++ +++DFGL D T KS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 645 DVHNFGIVLLEILS-GRKAYD 664
D+ FG+++ EI S G+ Y+
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE 223
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEM--ELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + + + + E ++ E+E+ ++RH NI+ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 548 YCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
Y + L+ EF PRG L+ L HG + ++ + A L Y H+ +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---ELADALHYCHERK---V 135
Query: 606 IHRDVKTLNILLDSDWGARIADFG 629
IHRD+K N+L+ +IADFG
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFG 159
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEM--ELEVLCNIRHSNIVNLLG 547
LG+G +G VY A + + + + + E ++ E+E+ ++RH NI+ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 548 YCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
Y + L+ EF PRG L+ L HG + ++ + A L Y H+ +
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---ELADALHYCHERK---V 136
Query: 606 IHRDVKTLNILLDSDWGARIADFG 629
IHRD+K N+L+ +IADFG
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFG 160
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 31/208 (14%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
D + F ++G+G+ G VY A+ + G++VA+++ N + +E + E+ V+
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRE 74
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
++ NIVN L L E +V E++ G+L D + + ++ + + + LE+
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEF 132
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL--LTSCERDLTTDM------------ 642
LH + +IHR++K+ NILL D ++ DFG + E+ + M
Sbjct: 133 LHSNQ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 189
Query: 643 -------KSDVHNFGIVLLEILSGRKAY 663
K D+ + GI+ +E++ G Y
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 31/170 (18%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIRE-FEM----ELE 532
D + +++ ++G+G++G V+KA G++VA+K+ ++ N +E F + E++
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKK-----VLMENEKEGFPITALREIK 69
Query: 533 VLCNIRHSNIVNLLGYCLEM--------GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRL 584
+L ++H N+VNL+ C G LV++F HD L G LS + L
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE----HD-LAGLLSNVLVKFTL 124
Query: 585 ----KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++ GL Y+H++ I+HRD+K N+L+ D ++ADFGL
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT----IIHTNIREFEMELEVLCN 536
F++ ++G G+YG VYKA + G VA+K+ T + T IRE + +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 57
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H NIV LL + LV+E + + L+ + L Q +GL +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H ++HRD+K N+L++++ ++ADFGL
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G +G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 23 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 79
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 80 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 136
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHRD++ NIL+ +IADFGL E + T
Sbjct: 137 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 193
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 194 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 239
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 240 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 9/176 (5%)
Query: 459 PHPASACPGMAQVFRLSEL---KDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRAN 515
P PA G + ++EL D F + E+G GS+G VY A V +V +
Sbjct: 28 PMPAGGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKM 87
Query: 516 AATIIHTNIR--EFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG 573
+ + +N + + E+ L +RH N + G L LV E+ G+ D L
Sbjct: 88 SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEV 146
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG 629
PL ++ A +GL YLH +IHRDVK NILL ++ DFG
Sbjct: 147 HKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFG 199
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 29/201 (14%)
Query: 487 FNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
ELG G +G V VA+K ++ EF E +V+ N+ H +V L
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLY 85
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G C + ++ E+M G L ++L L++ + +EYL + +
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 607 HRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKS 644
HRD+ N L++ +++DFGL D T KS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 645 DVHNFGIVLLEILS-GRKAYD 664
D+ FG+++ EI S G+ Y+
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE 223
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 35/205 (17%)
Query: 487 FNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
ELG G +G V VAVK ++ + EF E + + + H +V
Sbjct: 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVKFY 69
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHL--HG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
G C + +V E++ G L ++L HG GL P S L++ +G+ +L +
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFL---ESH 123
Query: 604 PIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----------------------LTTD 641
IHRD+ N L+D D +++DFG+ D
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS 183
Query: 642 MKSDVHNFGIVLLEILS-GRKAYDI 665
KSDV FGI++ E+ S G+ YD+
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYDL 208
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G +G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 77
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 78 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 134
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHRD++ NIL+ +IADFGL E + T
Sbjct: 135 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 191
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 237
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 31/207 (14%)
Query: 488 NELGRGSYGFV-YKAVLVDGRQVAVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNL 545
+ LG G++G V + G +VAVK N I ++ + + E++ L RH +I+ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 546 LGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
+ +V E++ G L D++ HG + + ++ Q ++Y H+
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR---RLFQQILSAVDYCHRHM-- 131
Query: 604 PIIHRDVKTLNILLDSDWGARIADFGL---LTSCE--RD----------------LTTDM 642
++HRD+K N+LLD+ A+IADFGL ++ E RD L
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGP 190
Query: 643 KSDVHNFGIVLLEILSGRKAYDIEYVP 669
+ D+ + G++L +L G +D E+VP
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G +G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 24 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 80
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 81 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 137
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHRD++ NIL+ +IADFGL E + T
Sbjct: 138 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 194
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 195 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 240
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 241 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G +G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 71
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 72 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 128
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHRD++ NIL+ +IADFGL E + T
Sbjct: 129 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 185
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 231
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G +G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 16 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 72
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 73 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 129
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHRD++ NIL+ +IADFGL E + T
Sbjct: 130 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 186
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 232
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 233 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G +G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 17 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 73
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 74 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 130
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHRD++ NIL+ +IADFGL E + T
Sbjct: 131 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 187
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 233
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 234 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G +G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 25 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 81
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 82 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 138
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHRD++ NIL+ +IADFGL E + T
Sbjct: 139 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 195
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 196 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 241
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 242 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 31/170 (18%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIRE-FEM----ELE 532
D + +++ ++G+G++G V+KA G++VA+K+ ++ N +E F + E++
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKK-----VLMENEKEGFPITALREIK 68
Query: 533 VLCNIRHSNIVNLLGYCLEM--------GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRL 584
+L ++H N+VNL+ C G LV++F HD L G LS + L
Sbjct: 69 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE----HD-LAGLLSNVLVKFTL 123
Query: 585 ----KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++ GL Y+H++ I+HRD+K N+L+ D ++ADFGL
Sbjct: 124 SEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL 170
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G +G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 71
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 72 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 128
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHRD++ NIL+ +IADFGL E + T
Sbjct: 129 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 185
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 231
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 31/170 (18%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIRE-FEM----ELE 532
D + +++ ++G+G++G V+KA G++VA+K+ ++ N +E F + E++
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKK-----VLMENEKEGFPITALREIK 69
Query: 533 VLCNIRHSNIVNLLGYCLEM--------GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRL 584
+L ++H N+VNL+ C G LV++F HD L G LS + L
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE----HD-LAGLLSNVLVKFTL 124
Query: 585 ----KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++ GL Y+H++ I+HRD+K N+L+ D ++ADFGL
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 474 LSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR-----EFE 528
L ELKD + F++ +ELG G+ G V+K V ++ +IH I+ +
Sbjct: 3 LGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARK-----LIHLEIKPAIRNQII 55
Query: 529 MELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISM 588
EL+VL IV G GE + E M G+L D + + + K+S+
Sbjct: 56 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSI 114
Query: 589 QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL-----------------L 631
KGL YL + I+HRDVK NIL++S ++ DFG+
Sbjct: 115 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSY 172
Query: 632 TSCERDLTT--DMKSDVHNFGIVLLEILSGR 660
S ER T ++SD+ + G+ L+E+ GR
Sbjct: 173 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 29/201 (14%)
Query: 487 FNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
ELG G +G V VA+K ++ EF E +V+ N+ H +V L
Sbjct: 20 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLY 76
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G C + ++ E+M G L ++L L++ + +EYL + +
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 133
Query: 607 HRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKS 644
HRD+ N L++ +++DFGL D T KS
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 645 DVHNFGIVLLEILS-GRKAYD 664
D+ FG+++ EI S G+ Y+
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYE 214
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 39/195 (20%)
Query: 493 GSYGFVYKAVLVDGRQVAVKRANAATIIHTN----IREFEMELEVLCNIRHSNIVNLLGY 548
G +G VYKA ++ +V AA +I T + ++ +E+++L + H NIV LL
Sbjct: 21 GDFGKVYKA---QNKETSV--LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHR 608
++ EF G + + PL S + Q L YLH + IIHR
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHR 132
Query: 609 DVKTLNILLDSDWGARIADFGL-------------------------LTSCE--RDLTTD 641
D+K NIL D ++ADFG+ + CE +D D
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 192
Query: 642 MKSDVHNFGIVLLEI 656
K+DV + GI L+E+
Sbjct: 193 YKADVWSLGITLIEM 207
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G +G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 71
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 72 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 128
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHRD++ NIL+ +IADFGL E + T
Sbjct: 129 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 185
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 231
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 100/226 (44%), Gaps = 38/226 (16%)
Query: 476 ELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR-----EFEME 530
ELKD + F++ +ELG G+ G V+K V ++ +IH I+ + E
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARK-----LIHLEIKPAIRNQIIRE 54
Query: 531 LEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQA 590
L+VL IV G GE + E M G+L D + + + K+S+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAV 113
Query: 591 AKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL-----------------LTS 633
KGL YL + I+HRDVK NIL++S ++ DFG+ S
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMS 171
Query: 634 CERDLTT--DMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWAL 677
ER T ++SD+ + G+ L+E+ GR Y I PP E L
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR--YPIP--PPDAKELEL 213
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 101/227 (44%), Gaps = 38/227 (16%)
Query: 476 ELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR-----EFEME 530
ELKD + F++ +ELG G+ G V+K V ++ +IH I+ + E
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARK-----LIHLEIKPAIRNQIIRE 54
Query: 531 LEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQA 590
L+VL IV G GE + E M G+L D + + + K+S+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAV 113
Query: 591 AKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL-----------------LTS 633
KGL YL + I+HRDVK NIL++S ++ DFG+ S
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMS 171
Query: 634 CERDLTT--DMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWALP 678
ER T ++SD+ + G+ L+E+ GR Y I PP E + P
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR--YPIP--PPDAKEDSRP 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G +G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 77
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 78 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 134
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHRD++ NIL+ +IADFGL E + T
Sbjct: 135 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 191
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 237
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 29/201 (14%)
Query: 487 FNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
ELG G +G V VA+K ++ EF E +V+ N+ H +V L
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G C + ++ E+M G L ++L L++ + +EYL + +
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 607 HRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKS 644
HRD+ N L++ +++DFGL D T KS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 645 DVHNFGIVLLEILS-GRKAYD 664
D+ FG+++ EI S G+ Y+
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 29/201 (14%)
Query: 487 FNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
ELG G +G V VA+K ++ EF E +V+ N+ H +V L
Sbjct: 13 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLY 69
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G C + ++ E+M G L ++L L++ + +EYL + +
Sbjct: 70 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKS 644
HRD+ N L++ +++DFGL D T KS
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 645 DVHNFGIVLLEILS-GRKAYD 664
D+ FG+++ EI S G+ Y+
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYE 207
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 468 MAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR-- 525
+ Q ++ ELKD + F++ +ELG G+ G V+K V ++ +IH I+
Sbjct: 13 LTQKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARK-----LIHLEIKPA 65
Query: 526 ---EFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSL 582
+ EL+VL IV G GE + E M G+L D + + +
Sbjct: 66 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQI 124
Query: 583 RLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL------------ 630
K+S+ KGL YL + I+HRDVK NIL++S ++ DFG+
Sbjct: 125 LGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 182
Query: 631 -----LTSCERDLTT--DMKSDVHNFGIVLLEILSGR 660
S ER T ++SD+ + G+ L+E+ GR
Sbjct: 183 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G +G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 76
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 77 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 133
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHRD++ NIL+ +IADFGL E + T
Sbjct: 134 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 190
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 191 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 236
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 237 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 100/226 (44%), Gaps = 38/226 (16%)
Query: 476 ELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR-----EFEME 530
ELKD + F++ +ELG G+ G V+K V ++ +IH I+ + E
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARK-----LIHLEIKPAIRNQIIRE 54
Query: 531 LEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQA 590
L+VL IV G GE + E M G+L D + + + K+S+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAV 113
Query: 591 AKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL-----------------LTS 633
KGL YL + I+HRDVK NIL++S ++ DFG+ S
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMS 171
Query: 634 CERDLTT--DMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWAL 677
ER T ++SD+ + G+ L+E+ GR Y I PP E L
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR--YPIP--PPDAKELEL 213
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 29/201 (14%)
Query: 487 FNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
ELG G +G V VA+K ++ EF E +V+ N+ H +V L
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G C + ++ E+M G L ++L L++ + +EYL + +
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 607 HRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKS 644
HRD+ N L++ +++DFGL D T KS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 645 DVHNFGIVLLEILS-GRKAYD 664
D+ FG+++ EI S G+ Y+
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
LG+G+YG VY L + ++A+K ++ + E+ + +++H NIV LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS--QPLHEEIALHKHLKHKNIVQYLGS 87
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSPL--NWSLRLKISMQAAKGLEYLHKDAAPPII 606
E G + E +P G+L L PL N + Q +GL+YLH + I+
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IV 144
Query: 607 HRDVKTLNILLDSDWGA-RIADFG 629
HRD+K N+L+++ G +I+DFG
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFG 168
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 29/201 (14%)
Query: 487 FNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
ELG G +G V VA+K ++ EF E +V+ N+ H +V L
Sbjct: 9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLY 65
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G C + ++ E+M G L ++L L++ + +EYL + +
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 122
Query: 607 HRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----------------------DMKS 644
HRD+ N L++ +++DFGL D T KS
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 645 DVHNFGIVLLEILS-GRKAYD 664
D+ FG+++ EI S G+ Y+
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYE 203
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G +G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 10 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 66
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 67 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 123
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHRD++ NIL+ +IADFGL E + T
Sbjct: 124 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 180
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 181 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 226
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 227 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 43/222 (19%)
Query: 474 LSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEV 533
LS L+D F+ +G G+YG VYK V Q+A + E + E+ +
Sbjct: 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAA--IKVMDVTGDEEEEIKQEINM 73
Query: 534 LCNI-RHSNIVNLLGYCLE-----MGERL-LVYEFMPRGTLHD---HLHGGLSPLNWSLR 583
L H NI G ++ M ++L LV EF G++ D + G W
Sbjct: 74 LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY 133
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER------- 636
I + +GL +LH+ +IHRD+K N+LL + ++ DFG+ +R
Sbjct: 134 --ICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT 188
Query: 637 -------------------DLTTDMKSDVHNFGIVLLEILSG 659
D T D KSD+ + GI +E+ G
Sbjct: 189 FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 31/208 (14%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
D F ++G GS G V A G+QVAVK+ + RE E+ ++ +
Sbjct: 42 DPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRD 98
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H N+V++ L E +V EF+ G L D + + +N + + + L Y
Sbjct: 99 YHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSY 156
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD------------------- 637
LH +IHRD+K+ +ILL SD +++DFG ++
Sbjct: 157 LHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVI 213
Query: 638 --LTTDMKSDVHNFGIVLLEILSGRKAY 663
L + D+ + GI+++E++ G Y
Sbjct: 214 SRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 489 ELGRGSYGFVYKAVLVDGR-QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
E+GRGS+ VYK + + +VA + + + F+ E E L ++H NIV
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 548 --YCLEMGER--LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
G++ +LV E GTL +L LR Q KGL++LH P
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLR-SWCRQILKGLQFLH-TRTP 150
Query: 604 PIIHRDVKTLNILLDSDWGA-RIADFGLLT 632
PIIHRD+K NI + G+ +I D GL T
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 100/226 (44%), Gaps = 38/226 (16%)
Query: 476 ELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR-----EFEME 530
ELKD + F++ +ELG G+ G V+K V ++ +IH I+ + E
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARK-----LIHLEIKPAIRNQIIRE 54
Query: 531 LEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQA 590
L+VL IV G GE + E M G+L D + + + K+S+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAV 113
Query: 591 AKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL-----------------LTS 633
KGL YL + I+HRDVK NIL++S ++ DFG+ S
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMS 171
Query: 634 CERDLTT--DMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWAL 677
ER T ++SD+ + G+ L+E+ GR Y I PP E L
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR--YPIP--PPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 100/226 (44%), Gaps = 38/226 (16%)
Query: 476 ELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR-----EFEME 530
ELKD + F++ +ELG G+ G V+K V ++ +IH I+ + E
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARK-----LIHLEIKPAIRNQIIRE 54
Query: 531 LEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQA 590
L+VL IV G GE + E M G+L D + + + K+S+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAV 113
Query: 591 AKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL-----------------LTS 633
KGL YL + I+HRDVK NIL++S ++ DFG+ S
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMS 171
Query: 634 CERDLTT--DMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWAL 677
ER T ++SD+ + G+ L+E+ GR Y I PP E L
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR--YPIP--PPDAKELEL 213
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
LG+G+YG VY L + ++A+K ++ + E+ + +++H NIV LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS--QPLHEEIALHKHLKHKNIVQYLGS 73
Query: 549 CLEMGERLLVYEFMPRGTLHDHLHGGLSPL--NWSLRLKISMQAAKGLEYLHKDAAPPII 606
E G + E +P G+L L PL N + Q +GL+YLH + I+
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IV 130
Query: 607 HRDVKTLNILLDSDWGA-RIADFG 629
HRD+K N+L+++ G +I+DFG
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFG 154
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAAT---IIHTNIREFEMELEVLC 535
+++ FK+ +LG G+Y VYK + G VA+K + T IRE + ++
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIRE----ISLMK 58
Query: 536 NIRHSNIVNLLGYCLEMGERLLVYEFMPR--GTLHDHLHGGLSPLNWSLRL--KISMQAA 591
++H NIV L + LV+EFM D G +P L L Q
Sbjct: 59 ELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+GL + H++ I+HRD+K N+L++ ++ DFGL
Sbjct: 119 QGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGL 154
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 169
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 170 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 196
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 176 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 202
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHT--NIREFEMELEVLCNIRHS 540
F+E LG+G++G V KA +D R A+K+ I HT + E+ +L ++ H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK-----IRHTEEKLSTILSEVMLLASLNHQ 62
Query: 541 NIVNLLGYCLEM-------------GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS 587
+V LE + E+ GTL+D +H ++
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVH 647
Q + L Y+H IIHRD+K +NI +D +I DFGL + R L +K D
Sbjct: 123 RQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI-LKLDSQ 178
Query: 648 NF 649
N
Sbjct: 179 NL 180
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 177
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 178 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 204
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 466 PGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR 525
P +A++F D F + E+G GS+G VY A V +V + + + +N +
Sbjct: 2 PDVAELFFKD---DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEK 58
Query: 526 --EFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
+ E+ L +RH N + G L LV E+ G+ D L PL
Sbjct: 59 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEI 117
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG 629
++ A +GL YLH +IHRDVK NILL ++ DFG
Sbjct: 118 AAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFG 160
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 179
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 180 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 206
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 176 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 202
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 488 NELGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVN 544
+ LG G++G V K L G +VAVK N I ++ + E++ L RH +I+
Sbjct: 22 DTLGVGTFGKVKVGKHELT-GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 545 LLGYCLEMGERLLVYEFMPRGTLHDHL-HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
L + +V E++ G L D++ G S RL Q G++Y H+
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRL--FQQILSGVDYCHRHM-- 136
Query: 604 PIIHRDVKTLNILLDSDWGARIADFGL 630
++HRD+K N+LLD+ A+IADFGL
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGL 162
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 489 ELGRGSYGFVYKAVLVD--GRQVAVKRANAAT----IIHTNIREFEMELEVLCNIRHSNI 542
E+G G+YG V+KA + GR VA+KR T + + IRE + L L H N+
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPNV 76
Query: 543 VNLLGYC-LEMGER----LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISM-QAAKGLEY 596
V L C + +R LV+E + + L +L P + +K M Q +GL++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LH ++HRD+K NIL+ S ++ADFGL
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 166
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 85/201 (42%), Gaps = 35/201 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQV----AVKRANAATIIHT--NIREFEMELEVLCNI 537
F+ LG G+YG V+ + G A+K ATI+ E +VL +I
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 538 RHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
R S + L Y + +L L+ +++ G L HL +++ + + LE+
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG-EIVLALEH 174
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVLLEI 656
LHK II+RD+K NILLDS+ + DFGL D T
Sbjct: 175 LHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET----------------- 214
Query: 657 LSGRKAYD----IEYVPPGIV 673
+AYD IEY+ P IV
Sbjct: 215 ---ERAYDFCGTIEYMAPDIV 232
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 220
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 221 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 247
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 21/166 (12%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGR---QVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
+++ +G G+YG V AV DGR +VA+K+ + EL +L ++RH
Sbjct: 27 YRDLQPVGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 84
Query: 541 NIVNLLGYCL------EMGERLLVYEFM--PRGTLHDHLHGGLSPLNWSLRLKISMQAAK 592
N++ LL + + LV FM G L H G + + + Q K
Sbjct: 85 NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-----LVYQMLK 139
Query: 593 GLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDL 638
GL Y+H A IIHRD+K N+ ++ D +I DFGL + ++
Sbjct: 140 GLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM 182
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 31/170 (18%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIRE-FEM----ELE 532
D + +++ ++G+G++G V+KA G++VA+K+ ++ N +E F + E++
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKK-----VLMENEKEGFPITALREIK 69
Query: 533 VLCNIRHSNIVNLLGYCLEMGERL--------LVYEFMPRGTLHDHLHGGLSPLNWSLRL 584
+L ++H N+VNL+ C LV++F HD L G LS + L
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCE----HD-LAGLLSNVLVKFTL 124
Query: 585 ----KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++ GL Y+H++ I+HRD+K N+L+ D ++ADFGL
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 146
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 147 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 173
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 22/169 (13%)
Query: 476 ELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQ-VAVK------RANAAT-IIHTNIREF 527
++K +++ + LG G + VYKA + Q VA+K R+ A I T +RE
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE- 62
Query: 528 EMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRG---TLHDHLHGGLSPLNWSLRL 584
+++L + H NI+ LL LV++FM + D+ L+P + +
Sbjct: 63 ---IKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDN-SLVLTPSHIKAYM 118
Query: 585 KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
+++Q GLEYLH+ I+HRD+K N+LLD + ++ADFGL S
Sbjct: 119 LMTLQ---GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKS 161
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 180
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 489 ELGRGSYGFVYKAVLVD--GRQVAVKRANAAT----IIHTNIREFEMELEVLCNIRHSNI 542
E+G G+YG V+KA + GR VA+KR T + + IRE + L L H N+
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPNV 76
Query: 543 VNLLGYC-LEMGER----LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISM-QAAKGLEY 596
V L C + +R LV+E + + L +L P + +K M Q +GL++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LH ++HRD+K NIL+ S ++ADFGL
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 166
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 489 ELGRGSYGFVYKAVLVD--GRQVAVKRANAAT----IIHTNIREFEMELEVLCNIRHSNI 542
E+G G+YG V+KA + GR VA+KR T + + IRE + L L H N+
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPNV 76
Query: 543 VNLLGYC-LEMGER----LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISM-QAAKGLEY 596
V L C + +R LV+E + + L +L P + +K M Q +GL++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LH ++HRD+K NIL+ S ++ADFGL
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 166
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 180
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 89
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 149
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 150 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 176
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 37/180 (20%)
Query: 482 NGFKEFNELGRGSYGFVYKA------VLVDGRQVAVK--RANAATIIHTNIREFEMELEV 533
N + ++G G++G V++A VAVK + A+ + + F+ E +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD---FQREAAL 103
Query: 534 LCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL------------HGGLS----- 576
+ + NIV LLG C L++E+M G L++ L H LS
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 577 ------PLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
PL+ + +L I+ Q A G+ YL + +HRD+ T N L+ + +IADFGL
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGL 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 14/157 (8%)
Query: 487 FNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHT----NIREFEMELEVLCNIRHSNI 542
ELG G++G V++ V + A R A I+T + + E+ ++ + H +
Sbjct: 56 LEELGSGAFGVVHRCV-----EKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAA 602
+NL + E +L+ EF+ G L D + ++ + + QA +GL+++H+ +
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS- 169
Query: 603 PPIIHRDVKTLNILLDSDWGA--RIADFGLLTSCERD 637
I+H D+K NI+ ++ + +I DFGL T D
Sbjct: 170 --IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 160
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 161 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 187
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G +G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 11 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 67
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 68 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 124
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHR+++ NIL+ +IADFGL E + T
Sbjct: 125 N---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 181
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 182 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 227
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 228 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 44/211 (20%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG GS+G V A G++VA+K N + ++++ E E+ L +RH +I+ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAK--------GLEYLHK 599
E ++V E+ L D++ R K+S Q A+ +EY H+
Sbjct: 82 VIKSKDEIIMVIEY-AGNELFDYI---------VQRDKMSEQEARRFFQQIISAVEYCHR 131
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFG----------LLTSC-----------ERDL 638
I+HRD+K N+LLD +IADFG L TSC L
Sbjct: 132 HK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 188
Query: 639 TTDMKSDVHNFGIVLLEILSGRKAYDIEYVP 669
+ DV + G++L +L R +D E +P
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRRLPFDDESIP 219
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 154
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 155 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 181
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 44/211 (20%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG GS+G V A G++VA+K N + ++++ E E+ L +RH +I+ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAK--------GLEYLHK 599
E ++V E+ L D++ R K+S Q A+ +EY H+
Sbjct: 81 VIKSKDEIIMVIEYAG-NELFDYI---------VQRDKMSEQEARRFFQQIISAVEYCHR 130
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFG----------LLTSC-----------ERDL 638
I+HRD+K N+LLD +IADFG L TSC L
Sbjct: 131 HK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 187
Query: 639 TTDMKSDVHNFGIVLLEILSGRKAYDIEYVP 669
+ DV + G++L +L R +D E +P
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLPFDDESIP 218
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 44/211 (20%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG GS+G V A G++VA+K N + ++++ E E+ L +RH +I+ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAK--------GLEYLHK 599
E ++V E+ L D++ R K+S Q A+ +EY H+
Sbjct: 72 VIKSKDEIIMVIEYAG-NELFDYI---------VQRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFG----------LLTSC-----------ERDL 638
I+HRD+K N+LLD +IADFG L TSC L
Sbjct: 122 HK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 178
Query: 639 TTDMKSDVHNFGIVLLEILSGRKAYDIEYVP 669
+ DV + G++L +L R +D E +P
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLPFDDESIP 209
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 40/207 (19%)
Query: 490 LGRGSYGFVYKAVLV--DGRQ---VAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVN 544
+G G +G VYK +L G++ VA+K A + +F E ++ H NI+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV-DFLGEAGIMGQFSHHNIIR 110
Query: 545 LLGYCLEMGERLLVYEFMPRGTLHDHLH---GGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
L G + +++ E+M G L L G S L L+ A G++YL A
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYL---A 164
Query: 602 APPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LTTD---------------- 641
+HRD+ NIL++S+ +++DFGL E D TT
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 642 ----MKSDVHNFGIVLLEILS-GRKAY 663
SDV +FGIV+ E+++ G + Y
Sbjct: 225 RKFTSASDVWSFGIVMWEVMTYGERPY 251
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 168
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 168
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 44/211 (20%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG GS+G V A G++VA+K N + ++++ E E+ L +RH +I+ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAK--------GLEYLHK 599
E ++V E+ L D++ R K+S Q A+ +EY H+
Sbjct: 76 VIKSKDEIIMVIEY-AGNELFDYI---------VQRDKMSEQEARRFFQQIISAVEYCHR 125
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFG----------LLTSC-----------ERDL 638
I+HRD+K N+LLD +IADFG L TSC L
Sbjct: 126 HK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 182
Query: 639 TTDMKSDVHNFGIVLLEILSGRKAYDIEYVP 669
+ DV + G++L +L R +D E +P
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRRLPFDDESIP 213
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 82
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 142
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 143 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 169
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 168
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 168
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ + + R EL+++ + H NIV L +
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKK------VLQDKRFKNRELQIMRKLDHCNIVRLRYF 85
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 145
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 146 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 172
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 478 KDATNGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTN-IREFEMELE 532
K N F LG+G++G K +LV GR A+K II + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 533 VLCNIRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAA 591
VL N RH + L Y + +RL V E+ G L HL R +
Sbjct: 58 VLQNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIV 115
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LEYLH + +++RD+K N++LD D +I DFGL
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 478 KDATNGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTN-IREFEMELE 532
K N F LG+G++G K +LV GR A+K II + + E
Sbjct: 4 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 533 VLCNIRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAA 591
VL N RH + L Y + +RL V E+ G L HL R +
Sbjct: 61 VLQNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIV 118
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LEYLH + +++RD+K N++LD D +I DFGL
Sbjct: 119 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 154
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 478 KDATNGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTN-IREFEMELE 532
K N F LG+G++G K +LV GR A+K II + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 533 VLCNIRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAA 591
VL N RH + L Y + +RL V E+ G L HL R +
Sbjct: 58 VLQNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIV 115
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LEYLH + +++RD+K N++LD D +I DFGL
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKR----ANAATIIHTNIREFEMELEVLCNIR 538
+++ ++G GSYG V+K D G+ VA+K+ + I +RE M L ++
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRM----LKQLK 60
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLH--DHLHGGLSPLNWSLRLKISMQAAKGLEY 596
H N+VNLL LV+E+ LH D G+ L I+ Q + + +
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPE---HLVKSITWQTLQAVNF 117
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
HK IHRDVK NIL+ ++ DFG
Sbjct: 118 CHKHNC---IHRDVKPENILITKHSVIKLCDFGF 148
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 478 KDATNGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTN-IREFEMELE 532
K N F LG+G++G K +LV GR A+K II + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 533 VLCNIRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAA 591
VL N RH + L Y + +RL V E+ G L HL R +
Sbjct: 58 VLQNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIV 115
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LEYLH + +++RD+K N++LD D +I DFGL
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 478 KDATNGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTN-IREFEMELE 532
K N F LG+G++G K +LV GR A+K II + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 533 VLCNIRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAA 591
VL N RH + L Y + +RL V E+ G L HL R +
Sbjct: 58 VLQNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIV 115
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LEYLH + +++RD+K N++LD D +I DFGL
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 28/203 (13%)
Query: 490 LGRGSYGFVYKAVLVDGRQ-VAVKRANAATIIHTNIR-EFEMELEVLCNIRHSNIVNLLG 547
LG GS+G V A +Q VA+K + + +++ E E+ L +RH +I+ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ ++V E+ G L D++ R + Q +EY H+ I+H
Sbjct: 77 VITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCHRHK---IVH 131
Query: 608 RDVKTLNILLDSDWGARIADFG----------LLTSC-----------ERDLTTDMKSDV 646
RD+K N+LLD + +IADFG L TSC L + DV
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDV 191
Query: 647 HNFGIVLLEILSGRKAYDIEYVP 669
+ GIVL +L GR +D E++P
Sbjct: 192 WSCGIVLYVMLVGRLPFDDEFIP 214
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 49/274 (17%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIV 543
K LG G G V+ +VAVK ++ + F E ++ ++H +V
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLV 71
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKD 600
L Y + E + ++ E+M G+L D L G+ L + L ++ Q A+G+ ++ +
Sbjct: 72 RL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER 128
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT-------------------- 640
IHRD++ NIL+ +IADFGL E T
Sbjct: 129 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYG 185
Query: 641 --DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPR 697
+KSDV +FGI+L EI++ GR Y PG+ P + Q ++R + R
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPY------PGMTN---PEVIQN-----LERGYRMVR 231
Query: 698 NVEPLFKLADIAELAIRENPSELPTMSQVATWLE 731
+L + L +E P + PT + + LE
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 478 KDATNGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTN-IREFEMELE 532
K N F LG+G++G K +LV GR A+K II + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 533 VLCNIRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAA 591
VL N RH + L Y + +RL V E+ G L HL R +
Sbjct: 58 VLQNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIV 115
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LEYLH + +++RD+K N++LD D +I DFGL
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 462 ASACPGMAQVFRLSEL----KDATNGFKEF-NELGRGSYGFVYKAVLVDGRQVAVKRANA 516
ASA PG A + + +DA + F E +ELGRG+ VY+ +Q ++ A
Sbjct: 28 ASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRC-----KQKGTQKPYA 82
Query: 517 ATIIHTNIRE--FEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--H 572
++ + + E+ VL + H NI+ L E LV E + G L D +
Sbjct: 83 LKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEK 142
Query: 573 GGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFG 629
G S + + +K Q + + YLH++ I+HRD+K N+L + D +IADFG
Sbjct: 143 GYYSERDAADAVK---QILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFG 196
Query: 630 LLTSCERDLTTDMKSDVHNFGIVLLEILSG 659
L E + MK+ G EIL G
Sbjct: 197 LSKIVEHQVL--MKTVCGTPGYCAPEILRG 224
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 478 KDATNGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTN-IREFEMELE 532
K N F LG+G++G K +LV GR A+K II + + E
Sbjct: 6 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 533 VLCNIRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAA 591
VL N RH + L Y + +RL V E+ G L HL R +
Sbjct: 63 VLQNTRHP-FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIV 120
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LEYLH + +++RD+K N++LD D +I DFGL
Sbjct: 121 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 156
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
+G+G YG V++ L G VAVK ++ + RE E+ VL +RH NI+ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVK-IFSSRDEQSWFRETEIYNTVL--LRHDNILGFIAS- 70
Query: 550 LEMGER------LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD--- 600
+M R L+ + G+L+D L + +LRL +S AA GL +LH +
Sbjct: 71 -DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVS--AACGLAHLHVEIFG 127
Query: 601 --AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
P I HRD K+ N+L+ S+ IAD GL
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGL 159
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 468 MAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR-- 525
+ Q ++ ELKD + F+ +ELG G+ G V K V R + A +IH I+
Sbjct: 4 LTQKAKVGELKD--DDFERISELGAGNGGVVTK---VQHRPSGL--IMARKLIHLEIKPA 56
Query: 526 ---EFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSL 582
+ EL+VL IV G GE + E M G+L D + + +
Sbjct: 57 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEI 115
Query: 583 RLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL------------ 630
K+S+ +GL YL + I+HRDVK NIL++S ++ DFG+
Sbjct: 116 LGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 173
Query: 631 -----LTSCERDLTT--DMKSDVHNFGIVLLEILSGR 660
+ ER T ++SD+ + G+ L+E+ GR
Sbjct: 174 VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIRE-FEMELEVLCNIRHSNIVNLLG 547
LG+G + ++ D ++V A K + ++ + RE ME+ + ++ H ++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ + +V E R +L + LH L Q G +YLH++ +IH
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIH 144
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERD 637
RD+K N+ L+ D +I DFGL T E D
Sbjct: 145 RDLKLGNLFLNEDLEVKIGDFGLATKVEYD 174
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 43/266 (16%)
Query: 489 ELGRGSYGFVYKAVLV-DGRQVAVKRANAATIIHTNIREFEMELEV-LCNIRHSNIVNLL 546
ELGRG+YG V K V G+ +AVKR A T+ + M+L++ + + V
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRA-TVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 547 GYCLEMGERLLVYEFMPRG--TLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPP 604
G G+ + E M + + + + KI++ K LE+LH +
Sbjct: 73 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 130
Query: 605 IIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDM---------------------- 642
+IHRDVK N+L+++ ++ DFG+ D+ D+
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 643 --KSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVE 700
KSD+ + GI ++E+ R YD W P Q + + + LP + +
Sbjct: 191 SVKSDIWSLGITMIELAILRFPYD---------SWGTPF--QQLKQVVEEPSPQLPAD-K 238
Query: 701 PLFKLADIAELAIRENPSELPTMSQV 726
+ D +++N E PT ++
Sbjct: 239 FSAEFVDFTSQCLKKNSKERPTYPEL 264
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIRE-FEMELEVLCNIRHSNIVNLLG 547
LG+G + ++ D ++V A K + ++ + RE ME+ + ++ H ++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ + +V E R +L + LH L Q G +YLH++ +IH
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIH 164
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERD 637
RD+K N+ L+ D +I DFGL T E D
Sbjct: 165 RDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIRE-FEMELEVLCNIRHSNIVNLLG 547
LG+G + ++ D ++V A K + ++ + RE ME+ + ++ H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ + +V E R +L + LH L Q G +YLH++ +IH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIH 140
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERD 637
RD+K N+ L+ D +I DFGL T E D
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYD 170
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIRE-FEMELEVLCNIRHSNIVNLLG 547
LG+G + ++ D ++V A K + ++ + RE ME+ + ++ H ++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ + +V E R +L + LH L Q G +YLH++ +IH
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIH 162
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERD 637
RD+K N+ L+ D +I DFGL T E D
Sbjct: 163 RDLKLGNLFLNEDLEVKIGDFGLATKVEYD 192
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 36/203 (17%)
Query: 490 LGRGSYGFVYKAVLVDGR----QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNL 545
LG G +G VY+ V + + VAVK + N +F E ++ N+ H +IV L
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD-NKEKFMSEAVIMKNLDHPHIVKL 90
Query: 546 LGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
+G +E ++ E P G L +L + L + S+Q K + YL
Sbjct: 91 IG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC--- 146
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCE------------------------RDLTTD 641
+HRD+ NIL+ S ++ DFGL E R TT
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTT- 205
Query: 642 MKSDVHNFGIVLLEILS-GRKAY 663
SDV F + + EILS G++ +
Sbjct: 206 -ASDVWMFAVCMWEILSFGKQPF 227
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIRE-FEMELEVLCNIRHSNIVNLLG 547
LG+G + ++ D ++V A K + ++ + RE ME+ + ++ H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ + +V E R +L + LH L Q G +YLH++ +IH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIH 140
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERD 637
RD+K N+ L+ D +I DFGL T E D
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYD 170
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 36/203 (17%)
Query: 490 LGRGSYGFVYKAVLVDGR----QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNL 545
LG G +G VY+ V + + VAVK + N +F E ++ N+ H +IV L
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTL-DNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 546 LGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
+G +E ++ E P G L +L + L + S+Q K + YL
Sbjct: 79 IG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC--- 134
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCE------------------------RDLTTD 641
+HRD+ NIL+ S ++ DFGL E R TT
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTT- 193
Query: 642 MKSDVHNFGIVLLEILS-GRKAY 663
SDV F + + EILS G++ +
Sbjct: 194 -ASDVWMFAVCMWEILSFGKQPF 215
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV------LVDGRQVAVKRANAATIIHTNIREFEMELEV 533
AT+ ++ E+G G+YG VYKA V + V V I T +RE + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-VREVAL-LRR 59
Query: 534 LCNIRHSNIVNLLGYC-LEMGER----LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISM 588
L H N+V L+ C +R LV+E + + L +L P + +K M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKDLM 118
Query: 589 -QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
Q +GL++LH + I+HRD+K NIL+ S ++ADFGL
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 36/203 (17%)
Query: 490 LGRGSYGFVYKAVLVDGR----QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNL 545
LG G +G VY+ V + + VAVK + N +F E ++ N+ H +IV L
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTL-DNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 546 LGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
+G +E ++ E P G L +L + L + S+Q K + YL
Sbjct: 75 IG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC--- 130
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCE------------------------RDLTTD 641
+HRD+ NIL+ S ++ DFGL E R TT
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTT- 189
Query: 642 MKSDVHNFGIVLLEILS-GRKAY 663
SDV F + + EILS G++ +
Sbjct: 190 -ASDVWMFAVCMWEILSFGKQPF 211
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ EL+++ + H NIV L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR------ELQIMRKLDHCNIVRLRYF 81
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 168
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ EL+++ + H NIV L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR------ELQIMRKLDHCNIVRLRYF 81
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 168
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV------LVDGRQVAVKRANAATIIHTNIREFEMELEV 533
AT+ ++ E+G G+YG VYKA V + V V I T +RE + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-VREVAL-LRR 59
Query: 534 LCNIRHSNIVNLLGYC-LEMGER----LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISM 588
L H N+V L+ C +R LV+E + + L +L P + +K M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKDLM 118
Query: 589 -QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
Q +GL++LH + I+HRD+K NIL+ S ++ADFGL
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 490 LGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIRE-FEMELEVLCNIRHSNIVNLLG 547
LG+G + ++ D ++V A K + ++ + RE ME+ + ++ H ++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ + +V E R +L + LH L Q G +YLH++ +IH
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIH 138
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERD 637
RD+K N+ L+ D +I DFGL T E D
Sbjct: 139 RDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV------LVDGRQVAVKRANAATIIHTNIREFEMELEV 533
AT+ ++ E+G G+YG VYKA V + V V I T +RE + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-VREVAL-LRR 59
Query: 534 LCNIRHSNIVNLLGYC-LEMGER----LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISM 588
L H N+V L+ C +R LV+E + + L +L P + +K M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKDLM 118
Query: 589 -QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
Q +GL++LH + I+HRD+K NIL+ S ++ADFGL
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 29/209 (13%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTN-IREFEMELEVLCNIRH 539
+ F+ +G+GS+G V D +++ A+K N + N +R EL+++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
+VNL + + +V + + G L HL + +++L I + L+YL
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC-ELVMALDYLQN 133
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD------------LTTDMKS--- 644
IIHRD+K NILLD I DF + R+ + +M S
Sbjct: 134 QR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRK 190
Query: 645 --------DVHNFGIVLLEILSGRKAYDI 665
D + G+ E+L GR+ Y I
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHI 219
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 475 SELKDATNGFKEFNELGRGSYGFVYKAVLV----DGRQVAVKRANAATIIHTNIREFEME 530
SE D ++ F+ LG+GS+G V+ V G A+K AT+ + +ME
Sbjct: 22 SEKADPSH-FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKME 80
Query: 531 LEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQA 590
++L ++ H +V L G+ L+ +F+ G L L + ++ ++ +
Sbjct: 81 RDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-EL 139
Query: 591 AKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
A GL++LH + II+RD+K NILLD + ++ DFGL
Sbjct: 140 ALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGL 176
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 44/244 (18%)
Query: 475 SELKDATNGFKEFN------ELGRGSYGFVYKAVLVDGRQ---VAVKRANAATIIHTNIR 525
ELKD K N ELG G++G V + V ++ VA+K T +
Sbjct: 323 EELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTE 381
Query: 526 EFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLK 585
E E +++ + + IV L+G C + +LV E G LH L G + S +
Sbjct: 382 EMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE 440
Query: 586 ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT----- 640
+ Q + G++YL + +HR++ N+LL + A+I+DFGL + D +
Sbjct: 441 LLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497
Query: 641 -------------------DMKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLI 680
+SDV ++G+ + E LS G+K Y P + I
Sbjct: 498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----VMAFI 552
Query: 681 KQGK 684
+QGK
Sbjct: 553 EQGK 556
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 481 TNGFKEFNELGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHT-NIREFEMELEVLCNI 537
++ ++ +LG G+YG V K L G + A+K +++ T N E+ VL +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDH--LHGGLSPLNWSLRLKISMQAAKGLE 595
H NI+ L + + LV E G L D L S ++ ++ +K Q G
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---QVLSGTT 135
Query: 596 YLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFGLLTSCERDLTTDMKSDVHNFGIV 652
YLHK I+HRD+K N+LL+S D +I DFGL S ++ MK + +
Sbjct: 136 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGL--SAHFEVGGKMKERLGTAYYI 190
Query: 653 LLEILSGRKAYD 664
E+L RK YD
Sbjct: 191 APEVL--RKKYD 200
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GS+G VY+A L D G VA+K+ EL+++ + H NIV L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR------ELQIMRKLDHCNIVRLRYF 81
Query: 549 CLEMGERL------LVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKD 600
GE+ LV +++P H + + +K+ M Q + L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 601 AAPPIIHRDVKTLNILLDSDWGA-RIADFG 629
I HRD+K N+LLD D ++ DFG
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFG 168
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Query: 488 NELGRGSYGFVYKAVL-VDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++GRG++G V+ L D VAVK T+ +F E +L H NIV L+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRE-TLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G C + +V E + G L + L L++ AA G+EYL I
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC---I 235
Query: 607 HRDVKTLNILLDSDWGARIADFGL 630
HRD+ N L+ +I+DFG+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGM 259
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Query: 488 NELGRGSYGFVYKAVL-VDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
++GRG++G V+ L D VAVK T+ +F E +L H NIV L+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRE-TLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G C + +V E + G L + L L++ AA G+EYL I
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC---I 235
Query: 607 HRDVKTLNILLDSDWGARIADFGL 630
HRD+ N L+ +I+DFG+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGM 259
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 484 FKEFNELGRGSYGFVYKAVLV---DGRQV-AVKRANAATIIHTNIREFEMELEVLCNIRH 539
F+ LG+GS+G V+ + D RQ+ A+K AT+ + +ME ++L + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
IV L G+ L+ +F+ G L L + ++ ++ + A L++LH
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHLH- 143
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ II+RD+K NILLD + ++ DFGL
Sbjct: 144 --SLGIIYRDLKPENILLDEEGHIKLTDFGL 172
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHT--NIREFEMELEVLCNIRHS 540
F+E LG+G++G V KA +D R A+K+ I HT + E+ +L ++ H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK-----IRHTEEKLSTILSEVMLLASLNHQ 62
Query: 541 NIVNLLGYCLEM-------------GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS 587
+V LE + E+ TL+D +H ++
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVH 647
Q + L Y+H IIHRD+K +NI +D +I DFGL + R L +K D
Sbjct: 123 RQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI-LKLDSQ 178
Query: 648 NF 649
N
Sbjct: 179 NL 180
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 60/223 (26%)
Query: 490 LGRGSYGFVYKAVL--VDGR----QVAVK--RANAATIIHTNIREFEMELEVLCNIRHSN 541
LG G +G V KA + GR VAVK + NA+ + +R+ E VL + H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP---SELRDLLSEFNVLKQVNHPH 87
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHL-----------------------HGGLSPL 578
++ L G C + G LL+ E+ G+L L H L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER-- 636
+ + Q ++G++YL A ++HRD+ NIL+ +I+DFGL
Sbjct: 148 TMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 637 ---------------------DLTTDMKSDVHNFGIVLLEILS 658
D +SDV +FG++L EI++
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 60/223 (26%)
Query: 490 LGRGSYGFVYKAVL--VDGR----QVAVK--RANAATIIHTNIREFEMELEVLCNIRHSN 541
LG G +G V KA + GR VAVK + NA+ + +R+ E VL + H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP---SELRDLLSEFNVLKQVNHPH 87
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHL-----------------------HGGLSPL 578
++ L G C + G LL+ E+ G+L L H L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER-- 636
+ + Q ++G++YL A ++HRD+ NIL+ +I+DFGL
Sbjct: 148 TMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 637 ---------------------DLTTDMKSDVHNFGIVLLEILS 658
D +SDV +FG++L EI++
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 38/224 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQ---VAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNL 545
ELG G++G V + V ++ VA+K T + E E +++ + + IV L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRL 75
Query: 546 LGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
+G C + +LV E G LH L G + S ++ Q + G++YL +
Sbjct: 76 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---F 131
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTT------------------------D 641
+HRD+ N+LL + A+I+DFGL + D +
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 642 MKSDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLIKQGK 684
+SDV ++G+ + E LS G+K Y P + I+QGK
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----VMAFIEQGK 230
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 60/223 (26%)
Query: 490 LGRGSYGFVYKAVL--VDGR----QVAVK--RANAATIIHTNIREFEMELEVLCNIRHSN 541
LG G +G V KA + GR VAVK + NA+ + +R+ E VL + H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP---SELRDLLSEFNVLKQVNHPH 87
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHL-----------------------HGGLSPL 578
++ L G C + G LL+ E+ G+L L H L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER-- 636
+ + Q ++G++YL A ++HRD+ NIL+ +I+DFGL
Sbjct: 148 TMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 637 ---------------------DLTTDMKSDVHNFGIVLLEILS 658
D +SDV +FG++L EI++
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 34/259 (13%)
Query: 484 FKEFNELGRGSYGFVYKAVL-VDGRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRHSN 541
F +F LGRG +G V+ + G+ A K+ N + + M E ++L + HS
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSR 245
Query: 542 IVNLLGYCLEMGERL-LVYEFMPRGTLHDHLH-------GGLSPLNWSLRLKISMQAAKG 593
+ L Y E L LV M G + H++ G P + + Q G
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA----IFYTAQIVSG 301
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVL 653
LE+LH+ II+RD+K N+LLD D RI+D GL + T K G +
Sbjct: 302 LEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-QTKTKGYAGTPGFMA 357
Query: 654 LEILSGRKA-YDIEYVPPGIVEWAL-----PLIKQGKAAA-------IIDRNVALPRNVE 700
E+L G + + ++Y G+ + + P +G+ ++++ V P
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFS 417
Query: 701 PLFKLADIAELAIRENPSE 719
P K D E ++++P +
Sbjct: 418 PASK--DFCEALLQKDPEK 434
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 481 TNGFKEFNELGRGSYGFVY--KAVLVDGRQVAVKRANAATIIHT-NIREFEMELEVLCNI 537
++ ++ +LG G+YG V K L G + A+K +++ T N E+ VL +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDH--LHGGLSPLNWSLRLKISMQAAKGLE 595
H NI+ L + + LV E G L D L S ++ ++ +K Q G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---QVLSGTT 118
Query: 596 YLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFGLLTSCERDLTTDMKSDVHNFGIV 652
YLHK I+HRD+K N+LL+S D +I DFGL S ++ MK + +
Sbjct: 119 YLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGL--SAHFEVGGKMKERLGTAYYI 173
Query: 653 LLEILSGRKAYD 664
E+L RK YD
Sbjct: 174 APEVL--RKKYD 183
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 116/296 (39%), Gaps = 67/296 (22%)
Query: 490 LGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEM-ELEVLCNI-RHSN 541
LG G++G V +A VAVK + H RE M EL+VL + H N
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMN 88
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--------GGLSP---------LNWSLRL 584
IVNLLG C G L++ E+ G L + L SP L+ L
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 585 KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMK- 643
S Q AKG+ +L A+ IHRD+ NILL +I DFGL + D +K
Sbjct: 149 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205
Query: 644 ----------------------SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLI 680
SDV ++GI L E+ S G Y PG +P+
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY------PG-----MPV- 253
Query: 681 KQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
K +I + ++ DI + +P + PT Q+ +E+ + +
Sbjct: 254 -DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 484 FKEFNELGRGSYGFVYKAVLV---DGRQV-AVKRANAATIIHTNIREFEMELEVLCNIRH 539
F+ LG+GS+G V+ + D RQ+ A+K AT+ + +ME ++L + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
IV L G+ L+ +F+ G L L + ++ ++ + A L++LH
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHLH- 143
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ II+RD+K NILLD + ++ DFGL
Sbjct: 144 --SLGIIYRDLKPENILLDEEGHIKLTDFGL 172
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 47/268 (17%)
Query: 489 ELGRGSYGFVYKAVLV-DGRQVAVKRANAATIIHTNIREFEMELEV-LCNIRHSNIVNLL 546
ELGRG+YG V K V G+ +AVKR A T+ + M+L++ + + V
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRA-TVNSQEQKRLLMDLDISMRTVDCPFTVTFY 116
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGL----SPLNWSLRLKISMQAAKGLEYLHKDAA 602
G G+ + E M T D + + + + KI++ K LE+LH +
Sbjct: 117 GALFREGDVWICMELM--DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 174
Query: 603 PPIIHRDVKTLNILLDSDWGARIADFG----LLTSCERDLTT------------------ 640
+IHRDVK N+L+++ ++ DFG L+ S + +
Sbjct: 175 --VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 641 --DMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRN 698
+KSD+ + GI ++E+ R YD W P Q + + + LP +
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYD---------SWGTPF--QQLKQVVEEPSPQLPAD 281
Query: 699 VEPLFKLADIAELAIRENPSELPTMSQV 726
+ + D +++N E PT ++
Sbjct: 282 -KFSAEFVDFTSQCLKKNSKERPTYPEL 308
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 480 ATNGFKEFNELGRGSYGFVYKA--------VLVDGRQVAVKRANAATIIHTNIREFEMEL 531
AT+ ++ E+G G+YG VYKA V + +V + + +RE + L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL-L 65
Query: 532 EVLCNIRHSNIVNLLGYC-LEMGER----LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKI 586
L H N+V L+ C +R LV+E + + L +L P + +K
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKD 124
Query: 587 SM-QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
M Q +GL++LH + I+HRD+K NIL+ S ++ADFGL
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 166
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 484 FKEFNELGRGSYGFVYKAVLV---DGRQV-AVKRANAATIIHTNIREFEMELEVLCNIRH 539
F+ LG+GS+G V+ + D RQ+ A+K AT+ + +ME ++L + H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
IV L G+ L+ +F+ G L L + ++ ++ + A L++LH
Sbjct: 87 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHLH- 144
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ II+RD+K NILLD + ++ DFGL
Sbjct: 145 --SLGIIYRDLKPENILLDEEGHIKLTDFGL 173
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 34/259 (13%)
Query: 484 FKEFNELGRGSYGFVYKAVL-VDGRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRHSN 541
F +F LGRG +G V+ + G+ A K+ N + + M E ++L + HS
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSR 245
Query: 542 IVNLLGYCLEMGERL-LVYEFMPRGTLHDHLH-------GGLSPLNWSLRLKISMQAAKG 593
+ L Y E L LV M G + H++ G P + + Q G
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA----IFYTAQIVSG 301
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVL 653
LE+LH+ II+RD+K N+LLD D RI+D GL + T K G +
Sbjct: 302 LEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-QTKTKGYAGTPGFMA 357
Query: 654 LEILSGRKA-YDIEYVPPGIVEWAL-----PLIKQGKAAA-------IIDRNVALPRNVE 700
E+L G + + ++Y G+ + + P +G+ ++++ V P
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFS 417
Query: 701 PLFKLADIAELAIRENPSE 719
P K D E ++++P +
Sbjct: 418 PASK--DFCEALLQKDPEK 434
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 34/259 (13%)
Query: 484 FKEFNELGRGSYGFVYKAVL-VDGRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRHSN 541
F +F LGRG +G V+ + G+ A K+ N + + M E ++L + HS
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSR 245
Query: 542 IVNLLGYCLEMGERL-LVYEFMPRGTLHDHLH-------GGLSPLNWSLRLKISMQAAKG 593
+ L Y E L LV M G + H++ G P + + Q G
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA----IFYTAQIVSG 301
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVL 653
LE+LH+ II+RD+K N+LLD D RI+D GL + T K G +
Sbjct: 302 LEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-QTKTKGYAGTPGFMA 357
Query: 654 LEILSGRKA-YDIEYVPPGIVEWAL-----PLIKQGKAAA-------IIDRNVALPRNVE 700
E+L G + + ++Y G+ + + P +G+ ++++ V P
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFS 417
Query: 701 PLFKLADIAELAIRENPSE 719
P K D E ++++P +
Sbjct: 418 PASK--DFCEALLQKDPEK 434
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 463 SACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVY----KAVLVDGRQVAVKRANAAT 518
A PGM F S+ + ++ +LG G+YG V K V+ +++ + +T
Sbjct: 21 QATPGM---FITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST 77
Query: 519 IIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPL 578
++ + E E+ VL + H NI+ L + + LV E G L D + +
Sbjct: 78 SSNSKLLE---EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM-KF 133
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFGLLTSCE 635
N I Q G+ YLHK I+HRD+K N+LL+S D +I DFGL E
Sbjct: 134 NEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190
Query: 636 RDLTTDMKSDVHNFGIVLLEILSGRKAYD 664
MK + + E+L RK YD
Sbjct: 191 N--QKKMKERLGTAYYIAPEVL--RKKYD 215
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 34/259 (13%)
Query: 484 FKEFNELGRGSYGFVYK-AVLVDGRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRHSN 541
F +F LGRG +G V+ + G+ A K+ N + + M E ++L + HS
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSR 245
Query: 542 IVNLLGYCLEMGERL-LVYEFMPRGTLHDHLH-------GGLSPLNWSLRLKISMQAAKG 593
+ L Y E L LV M G + H++ G P + + Q G
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA----IFYTAQIVSG 301
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVL 653
LE+LH+ II+RD+K N+LLD D RI+D GL + T K G +
Sbjct: 302 LEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-QTKTKGYAGTPGFMA 357
Query: 654 LEILSGRKA-YDIEYVPPGIVEWAL-----PLIKQGKAAA-------IIDRNVALPRNVE 700
E+L G + + ++Y G+ + + P +G+ ++++ V P
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFS 417
Query: 701 PLFKLADIAELAIRENPSE 719
P K D E ++++P +
Sbjct: 418 PASK--DFCEALLQKDPEK 434
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 116/296 (39%), Gaps = 67/296 (22%)
Query: 490 LGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEM-ELEVLCNI-RHSN 541
LG G++G V +A VAVK + H RE M EL+VL + H N
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMN 104
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--------GGLSP---------LNWSLRL 584
IVNLLG C G L++ E+ G L + L SP L+ L
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 585 KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMK- 643
S Q AKG+ +L A+ IHRD+ NILL +I DFGL + D +K
Sbjct: 165 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 221
Query: 644 ----------------------SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLI 680
SDV ++GI L E+ S G Y PG +P+
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY------PG-----MPV- 269
Query: 681 KQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
K +I + ++ DI + +P + PT Q+ +E+ + +
Sbjct: 270 -DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 324
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 116/296 (39%), Gaps = 67/296 (22%)
Query: 490 LGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEM-ELEVLCNI-RHSN 541
LG G++G V +A VAVK + H RE M EL+VL + H N
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMN 111
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--------GGLSP---------LNWSLRL 584
IVNLLG C G L++ E+ G L + L SP L+ L
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 585 KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMK- 643
S Q AKG+ +L A+ IHRD+ NILL +I DFGL + D +K
Sbjct: 172 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 228
Query: 644 ----------------------SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLI 680
SDV ++GI L E+ S G Y PG +P+
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY------PG-----MPV- 276
Query: 681 KQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
K +I + ++ DI + +P + PT Q+ +E+ + +
Sbjct: 277 -DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 331
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 21/189 (11%)
Query: 453 AIADSLPHPASACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVK 512
+AD L H ++ G F + + +G+G YG V++ G VAVK
Sbjct: 10 TLADLLDHSCTSGSGSGLPFLVQ--RTVARQITLLECVGKGRYGEVWRGSW-QGENVAVK 66
Query: 513 RANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGER------LLVYEFMPRGT 566
++ + RE E+ V+ +RH NI+ + +M R L+ + G+
Sbjct: 67 IFSSRDE-KSWFRETELYNTVM--LRHENILGFIAS--DMTSRHSSTQLWLITHYHEMGS 121
Query: 567 LHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH-----KDAAPPIIHRDVKTLNILLDSDW 621
L+D+L L+ L+ L+I + A GL +LH P I HRD+K+ NIL+ +
Sbjct: 122 LYDYLQ--LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG 179
Query: 622 GARIADFGL 630
IAD GL
Sbjct: 180 QCCIADLGL 188
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 116/296 (39%), Gaps = 67/296 (22%)
Query: 490 LGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEM-ELEVLCNI-RHSN 541
LG G++G V +A VAVK + H RE M EL+VL + H N
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMN 106
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--------GGLSP---------LNWSLRL 584
IVNLLG C G L++ E+ G L + L SP L+ L
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 585 KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMK- 643
S Q AKG+ +L A+ IHRD+ NILL +I DFGL + D +K
Sbjct: 167 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 223
Query: 644 ----------------------SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLI 680
SDV ++GI L E+ S G Y PG +P+
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY------PG-----MPV- 271
Query: 681 KQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
K +I + ++ DI + +P + PT Q+ +E+ + +
Sbjct: 272 -DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 326
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 93/224 (41%), Gaps = 62/224 (27%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIH----TNIREFEM-ELEVLCNI-RHSNIV 543
LG G++G V A + V A ++ ++ RE M EL+++ + H NIV
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 544 NLLGYCLEMGERLLVYEFMPRGTLHDHLHGG----------------------LSPLNWS 581
NLLG C G L++E+ G L ++L L+ L +
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 582 LRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD 641
L + Q AKG+E+L + +HRD+ N+L+ +I DFGL RD+ +D
Sbjct: 173 DLLCFAYQVAKGMEFLEFKSC---VHRDLAARNVLVTHGKVVKICDFGL----ARDIMSD 225
Query: 642 ---------------------------MKSDVHNFGIVLLEILS 658
+KSDV ++GI+L EI S
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 49/243 (20%)
Query: 465 CPGMAQVFRLSELKDATNGFKEFNE------------LGRGSYGFVYKAVL-VDGRQ--- 508
PGM +D +EF + +G G +G V L + G++
Sbjct: 4 TPGMKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIF 63
Query: 509 VAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLH 568
VA+K + R+F E ++ H N+++L G + +++ EFM G+L
Sbjct: 64 VAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 569 DHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADF 628
L + + A G++YL A +HRD+ NIL++S+ +++DF
Sbjct: 123 SFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDF 179
Query: 629 GLLTSCERDLTTD---------------------------MKSDVHNFGIVLLEILS-GR 660
GL E D T+D SDV ++GIV+ E++S G
Sbjct: 180 GLSRFLEDD-TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 238
Query: 661 KAY 663
+ Y
Sbjct: 239 RPY 241
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 46/205 (22%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELE---VLCNIRHSNIVNLL 546
+G+G +G VY +D Q ++ A + T +++ E L ++ + H N++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGL-----SP-LNWSLRLKIS--MQAAKGLEYLH 598
G +L E +P L HG L SP N +++ IS +Q A+G+EYL
Sbjct: 89 GI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL- 140
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLL-----------------------TSCE 635
A +HRD+ N +LD + ++ADFGL T+ E
Sbjct: 141 --AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 636 RDLTTDM--KSDVHNFGIVLLEILS 658
T KSDV +FG++L E+L+
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 116/296 (39%), Gaps = 67/296 (22%)
Query: 490 LGRGSYGFVYKAVLVD------GRQVAVKRANAATIIHTNIREFEM-ELEVLCNI-RHSN 541
LG G++G V +A VAVK + H RE M EL+VL + H N
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMN 111
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--------GGLSP---------LNWSLRL 584
IVNLLG C G L++ E+ G L + L SP L+ L
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 585 KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMK- 643
S Q AKG+ +L A+ IHRD+ NILL +I DFGL + D +K
Sbjct: 172 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKG 228
Query: 644 ----------------------SDVHNFGIVLLEILS-GRKAYDIEYVPPGIVEWALPLI 680
SDV ++GI L E+ S G Y PG +P+
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY------PG-----MPV- 276
Query: 681 KQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQIVKD 736
K +I + ++ DI + +P + PT Q+ +E+ + +
Sbjct: 277 -DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 331
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRHSNIVNLLG 547
LGRG +G V++A VD A+KR RE M E++ L + H IV
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 548 YCLEMG--ERLL-----VYEFMP-----RGTLHDHLHG--GLSPLNWSLRLKISMQAAKG 593
LE E+L VY ++ + L D ++G + S+ L I +Q A+
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
+E+LH ++HRD+K NI D ++ DFGL+T+ ++D
Sbjct: 131 VEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 171
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Query: 490 LGRGSYGFVY-----KAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVN 544
LG+G +G VY K+ + +V K + +R E+E+ ++ H NI+
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRR---EIEIQAHLHHPNILR 87
Query: 545 LLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPP 604
L Y + L+ E+ PRG L+ L + + I + A L Y H
Sbjct: 88 LYNYFYDRRRIYLILEYAPRGELYKELQKSCT-FDEQRTATIMEELADALMYCH---GKK 143
Query: 605 IIHRDVKTLNILLDSDWGARIADFG 629
+IHRD+K N+LL +IADFG
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFG 168
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 40/225 (17%)
Query: 471 VFRLSELKDATN-------GFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN 523
V ++ DATN G EF E+ G K + VA+K
Sbjct: 23 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI----SVAIKTLKVG-YTEKQ 77
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
R+F E ++ H NI+ L G + ++V E+M G+L L +
Sbjct: 78 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 137
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LT 639
+ + A G++YL +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 138 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 640 T--------------------DMKSDVHNFGIVLLEILS-GRKAY 663
T SDV ++GIVL E++S G + Y
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 239
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 484 FKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+ G V Y AVL R VA+K+ + T+ + EL ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 541 NIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
NI++LL E + LV E M L + L S L Q G+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLL---YQMLXGI 139
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 40/225 (17%)
Query: 471 VFRLSELKDATN-------GFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN 523
V ++ DATN G EF E+ G K + VA+K
Sbjct: 6 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI----SVAIKTLKVG-YTEKQ 60
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
R+F E ++ H NI+ L G + ++V E+M G+L L +
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 120
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LT 639
+ + A G++YL +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 121 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 640 T--------------------DMKSDVHNFGIVLLEILS-GRKAY 663
T SDV ++GIVL E++S G + Y
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 32/176 (18%)
Query: 482 NGFKEFNELGRGSYGFV----------YKAVLVDGRQVAVKRANAATIIHTN-------- 523
N + +E+G+GSYG V Y A+ V ++ +++A
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 524 -------IREFEMELEVLCNIRHSNIVNLLGYCLEMGER--LLVYEFMPRGTLHDHLHGG 574
I + E+ +L + H N+V L+ + E +V+E + +G + +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PT 130
Query: 575 LSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
L PL+ KG+EYLH IIHRD+K N+L+ D +IADFG+
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGV 183
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 44/209 (21%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVK--RANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
LG G V+ A L D R VAVK RA+ A +R F E + + H IV +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAVY 78
Query: 547 GYCLEMGER--------LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ GE +V E++ TL D +H P+ +++ A + L + H
Sbjct: 79 ----DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH 133
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSC------------------------ 634
++ IIHRDVK NIL+ + ++ DFG+ +
Sbjct: 134 QNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 635 ERDLTTDMKSDVHNFGIVLLEILSGRKAY 663
R + D +SDV++ G VL E+L+G +
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 40/225 (17%)
Query: 471 VFRLSELKDATN-------GFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN 523
V ++ DATN G EF E+ G K + VA+K
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI----SVAIKTLKVG-YTEKQ 89
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
R+F E ++ H NI+ L G + ++V E+M G+L L +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LT 639
+ + A G++YL +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 150 VGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 640 T--------------------DMKSDVHNFGIVLLEILS-GRKAY 663
T SDV ++GIVL E++S G + Y
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 15/152 (9%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
++G+G YG V+ G +VAVK T + RE E+ VL +RH NI+ +
Sbjct: 43 KQIGKGRYGEVWMGKW-RGEKVAVK-VFFTTEEASWFRETEIYQTVL--MRHENILGFIA 98
Query: 548 YCLE----MGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD--- 600
++ + L+ ++ G+L+D+L + L+ LK++ + GL +LH +
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKS--TTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 601 --AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
P I HRD+K+ NIL+ + IAD GL
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 40/225 (17%)
Query: 471 VFRLSELKDATN-------GFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN 523
V ++ DATN G EF E+ G K + VA+K
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI----SVAIKTLKVG-YTEKQ 89
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
R+F E ++ H NI+ L G + ++V E M G+L L +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 149
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LT 639
+ + A G++YL A +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 150 VGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 640 T--------------------DMKSDVHNFGIVLLEILS-GRKAY 663
T SDV ++GIVL E++S G + Y
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 40/225 (17%)
Query: 471 VFRLSELKDATN-------GFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN 523
V ++ DATN G EF E+ G K + VA+K
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI----SVAIKTLKVG-YTEKQ 89
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
R+F E ++ H NI+ L G + ++V E+M G+L L +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LT 639
+ + A G++YL +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 150 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 640 T--------------------DMKSDVHNFGIVLLEILS-GRKAY 663
T SDV ++GIVL E++S G + Y
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 19/152 (12%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
+G+G YG V++ G VAVK ++ + RE E+ V+ +RH NI+ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVK-IFSSRDEKSWFRETELYNTVM--LRHENILGFIAS- 70
Query: 550 LEMGER------LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH----- 598
+M R L+ + G+L+D+L L+ L+ L+I + A GL +LH
Sbjct: 71 -DMTSRHSSTQLWLITHYHEMGSLYDYLQ--LTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
P I HRD+K+ NIL+ + IAD GL
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIHTNIREFEMELEVLCNIR----HSNIVN 544
L G + FVY+A V GR+ A+KR ++ + ++ +C ++ H NIV
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKR-----LLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 545 LLGYC--------LEMGERLLVYEFMPRGTLHDHLHGGLS--PLNWSLRLKISMQAAKGL 594
E LL+ E +G L + L S PL+ LKI Q + +
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
+++H+ PPIIHRD+K N+LL + ++ DFG T+
Sbjct: 150 QHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 19/152 (12%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
+G+G YG V++ G VAVK ++ + RE E+ V+ +RH NI+ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVK-IFSSRDEKSWFRETELYNTVM--LRHENILGFIAS- 70
Query: 550 LEMGER------LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH----- 598
+M R L+ + G+L+D+L L+ L+ L+I + A GL +LH
Sbjct: 71 -DMTSRHSSTQLWLITHYHEMGSLYDYLQ--LTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
P I HRD+K+ NIL+ + IAD GL
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 490 LGRGSYGFV-YKAVLVDGRQ---VAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNL 545
+G G G V Y + V G++ VA+K A A R+F E ++ H NI+ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIK-ALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 546 LGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G ++V E+M G+L L + + G+ YL
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---Y 172
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERD-----LTTDMK----------------- 643
+HRD+ N+L+DS+ +++DFGL E D TT K
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 644 --SDVHNFGIVLLEILS-GRKAY 663
SDV +FG+V+ E+L+ G + Y
Sbjct: 233 SASDVWSFGVVMWEVLAYGERPY 255
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 40/225 (17%)
Query: 471 VFRLSELKDATN-------GFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN 523
V ++ DATN G EF E+ G K + VA+K
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI----SVAIKTLKVG-YTEKQ 89
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
R+F E ++ H NI+ L G + ++V E+M G+L L +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LT 639
+ + A G++YL +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 150 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 640 T--------------------DMKSDVHNFGIVLLEILS-GRKAY 663
T SDV ++GIVL E++S G + Y
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 479 DATNGFKEFNELGRGSYGFV-YKAVLVDGRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
D + F ++G GS G V V G+ VAVK+ + + RE E+ ++ +
Sbjct: 148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRD 204
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+H N+V + L E +V EF+ G L D + + +N + + + L
Sbjct: 205 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSV 262
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD------------------- 637
LH +IHRD+K+ +ILL D +++DFG ++
Sbjct: 263 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 319
Query: 638 --LTTDMKSDVHNFGIVLLEILSGRKAY 663
L + D+ + GI+++E++ G Y
Sbjct: 320 SRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 40/225 (17%)
Query: 471 VFRLSELKDATN-------GFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN 523
V ++ DATN G EF E+ G K + VA+K
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI----SVAIKTLKVG-YTEKQ 89
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
R+F E ++ H NI+ L G + ++V E+M G+L L +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LT 639
+ + A G++YL +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 150 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 640 T--------------------DMKSDVHNFGIVLLEILS-GRKAY 663
T SDV ++GIVL E++S G + Y
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 40/225 (17%)
Query: 471 VFRLSELKDATN-------GFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN 523
V ++ DATN G EF E+ G K + VA+K
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI----SVAIKTLKVG-YTEKQ 89
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
R+F E ++ H NI+ L G + ++V E+M G+L L +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LT 639
+ + A G++YL +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 150 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 640 T--------------------DMKSDVHNFGIVLLEILS-GRKAY 663
T SDV ++GIVL E++S G + Y
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 40/225 (17%)
Query: 471 VFRLSELKDATN-------GFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN 523
V ++ DATN G EF E+ G K + VA+K
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI----SVAIKTLKVG-YTEKQ 89
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
R+F E ++ H NI+ L G + ++V E+M G+L L +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LT 639
+ + A G++YL +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 150 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 640 T--------------------DMKSDVHNFGIVLLEILS-GRKAY 663
T SDV ++GIVL E++S G + Y
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 483 GFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIR-EFEMELEVLCNIRHS 540
F+ ++GRG + VY+A L+DG VA+K+ ++ R + E+++L + H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLH---DHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
N++ +E E +V E G L H + K +Q LE++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H ++HRD+K N+ + + ++ D GL
Sbjct: 153 HSRR---VMHRDIKPANVFITATGVVKLGDLGL 182
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 490 LGRGSYGFVYKAVLVDGR---QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
+G+G +G VY GR +VA++ + ++ F+ E+ RH N+V +
Sbjct: 41 IGKGRFGQVY-----HGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G C+ ++ TL+ + L+ + +I+ + KG+ YLH A I+
Sbjct: 96 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGIL 152
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
H+D+K+ N+ D+ I DFGL +
Sbjct: 153 HKDLKSKNVFYDNG-KVVITDFGLFS 177
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 490 LGRGSYGFV-YKAVLVDGRQ---VAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNL 545
+G G G V Y + V G++ VA+K A A R+F E ++ H NI+ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIK-ALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 546 LGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G ++V E+M G+L L + + G+ YL
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---Y 172
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERD-----LTTDMK----------------- 643
+HRD+ N+L+DS+ +++DFGL E D TT K
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 644 --SDVHNFGIVLLEILS-GRKAY 663
SDV +FG+V+ E+L+ G + Y
Sbjct: 233 SASDVWSFGVVMWEVLAYGERPY 255
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V + V G ++AVK+ + +IIH R + EL +L +++H
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 110
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 111 NVIGLLDV------------FTPATSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 156
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 157 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 213
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+M D+ + G ++ E+L+GR +
Sbjct: 214 TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 40/225 (17%)
Query: 471 VFRLSELKDATN-------GFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN 523
V ++ DATN G EF E+ G K + VA+K
Sbjct: 33 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI----SVAIKTLKVG-YTEKQ 87
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
R+F E ++ H NI+ L G + ++V E+M G+L L +
Sbjct: 88 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 147
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LT 639
+ + A G++YL +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 148 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 640 T--------------------DMKSDVHNFGIVLLEILS-GRKAY 663
T SDV ++GIVL E++S G + Y
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 249
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 25/182 (13%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHT--NIREFEMELEVLCNIRHS 540
F+E LG+G++G V KA +D R A+K+ I HT + E+ +L ++ H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK-----IRHTEEKLSTILSEVXLLASLNHQ 62
Query: 541 NIVNLLGYCLEM-------------GERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS 587
+V LE + E+ TL+D +H ++
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVH 647
Q + L Y+H IIHR++K NI +D +I DFGL + R L +K D
Sbjct: 123 RQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDI-LKLDSQ 178
Query: 648 NF 649
N
Sbjct: 179 NL 180
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTN-IREFEMELEVLCN 536
N F+ LG+G++G K +LV GR A+K I+ + + E VL N
Sbjct: 8 NEFEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 537 IRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLE 595
RH + L Y + +RL V E+ G L HL R + L+
Sbjct: 65 SRHP-FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALD 122
Query: 596 YLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
YLH + +++RD+K N++LD D +I DFGL
Sbjct: 123 YLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGL 155
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 44/209 (21%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVK--RANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
LG G V+ A L D R VAVK RA+ A +R F E + + H IV +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAVY 78
Query: 547 GYCLEMGER--------LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ GE +V E++ TL D +H P+ +++ A + L + H
Sbjct: 79 ----DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH 133
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSC------------------------ 634
++ IIHRDVK NI++ + ++ DFG+ +
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 635 ERDLTTDMKSDVHNFGIVLLEILSGRKAY 663
R + D +SDV++ G VL E+L+G +
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTN-IREFEMELEVLCN 536
N F+ LG+G++G K +LV GR A+K I+ + + E VL N
Sbjct: 9 NEFEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 537 IRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLE 595
RH + L Y + +RL V E+ G L HL R + L+
Sbjct: 66 SRHP-FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALD 123
Query: 596 YLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
YLH + +++RD+K N++LD D +I DFGL
Sbjct: 124 YLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGL 156
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTN-IREFEMELEVLCN 536
N F+ LG+G++G K +LV GR A+K I+ + + E VL N
Sbjct: 10 NEFEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 537 IRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLE 595
RH + L Y + +RL V E+ G L HL R + L+
Sbjct: 67 SRHP-FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALD 124
Query: 596 YLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
YLH + +++RD+K N++LD D +I DFGL
Sbjct: 125 YLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGL 157
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 479 DATNGFKEFNELGRGSYGFV-YKAVLVDGRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
D + F ++G GS G V V G+ VAVK+ + + RE E+ ++ +
Sbjct: 28 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRD 84
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+H N+V + L E +V EF+ G L D + + +N + + + L
Sbjct: 85 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSV 142
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD------------------- 637
LH +IHRD+K+ +ILL D +++DFG ++
Sbjct: 143 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 199
Query: 638 --LTTDMKSDVHNFGIVLLEILSGRKAY 663
L + D+ + GI+++E++ G Y
Sbjct: 200 SRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 44/209 (21%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVK--RANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
LG G V+ A L D R VAVK RA+ A +R F E + + H IV +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAVY 78
Query: 547 GYCLEMGER--------LLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ GE +V E++ TL D +H P+ +++ A + L + H
Sbjct: 79 ----DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH 133
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSC------------------------ 634
++ IIHRDVK NI++ + ++ DFG+ +
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 635 ERDLTTDMKSDVHNFGIVLLEILSGRKAY 663
R + D +SDV++ G VL E+L+G +
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 40/225 (17%)
Query: 471 VFRLSELKDATN-------GFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN 523
V ++ DATN G EF E+ G K + VA+K
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI----SVAIKTLKVG-YTEKQ 89
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
R+F E ++ H NI+ L G + ++V E+M G+L L +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LT 639
+ + A G++YL +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 150 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 640 T--------------------DMKSDVHNFGIVLLEILS-GRKAY 663
T SDV ++GIVL E++S G + Y
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKFY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 481 TNGFKEFNELGRGSYGFVYKAVLV-DGRQVAVKRANAATIIHTNIREFEMELEVLCNIRH 539
T+ ++ F ELG+G++ V + + + G++ A K N + + ++ E E + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
NIV L E G LV++ + G L + + + S + LE ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIQQILESVNH 118
Query: 600 DAAPPIIHRDVKTLNILLDSD---WGARIADFGLLTSCERD 637
I+HRD+K N+LL S ++ADFGL + D
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQ-VAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
+++ ++G G+YG V+KA + + VA+KR E+ +L ++H NI
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 543 VNLLGYCLEMGERLLVYEFMPRG--TLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L + LV+EF + D +G L P + Q KGL + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCHSR 120
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++HRD+K N+L++ + ++ADFGL
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLADFGL 147
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 33/203 (16%)
Query: 490 LGRGSYGFVYKAVL-VDGRQ---VAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNL 545
+G G +G V L V G++ VA+K A R+F E ++ H NI++L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAG-YTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 546 LGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G + +++ E+M G+L L + + G++YL +A
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA--- 152
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERD----LTT--------------------D 641
+HRD+ NIL++S+ +++DFG+ E D TT
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 212
Query: 642 MKSDVHNFGIVLLEILS-GRKAY 663
SDV ++GIV+ E++S G + Y
Sbjct: 213 SASDVWSYGIVMWEVMSYGERPY 235
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 479 DATNGFKEFNELGRGSYGFV-YKAVLVDGRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
D + F ++G GS G V V G+ VAVK+ + + RE E+ ++ +
Sbjct: 71 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRD 127
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+H N+V + L E +V EF+ G L D + + +N + + + L
Sbjct: 128 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSV 185
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD------------------- 637
LH +IHRD+K+ +ILL D +++DFG ++
Sbjct: 186 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 242
Query: 638 --LTTDMKSDVHNFGIVLLEILSGRKAY 663
L + D+ + GI+++E++ G Y
Sbjct: 243 SRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 47/269 (17%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCN--IRHSNIVNLLG 547
LG+G + Y+ +D ++V + +++ ++ +M E+ + + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ + +V E R +L + LH + Q +G++YLH + +IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIH 165
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDV----------------HNF-- 649
RD+K N+ L+ D +I DFGL T E D + K D+ H+F
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKDLCGTPNYIAPEVLCKKGHSFEV 223
Query: 650 -----GIVLLEILSGRKAYDIE-----YVPPGIVEWALPLIKQGKAAAIIDRNVALPRNV 699
G +L +L G+ ++ Y+ E+++P A+A+I R + +
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTL 283
Query: 700 EPLFKLADIAELAIRE------NPSELPT 722
P +AEL E P LPT
Sbjct: 284 RP-----SVAELLTDEFFTSGYAPMRLPT 307
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 479 DATNGFKEFNELGRGSYGFV-YKAVLVDGRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
D + F ++G GS G V V G+ VAVK+ + + RE E+ ++ +
Sbjct: 17 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRD 73
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+H N+V + L E +V EF+ G L D + + +N + + + L
Sbjct: 74 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSV 131
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD------------------- 637
LH +IHRD+K+ +ILL D +++DFG ++
Sbjct: 132 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 188
Query: 638 --LTTDMKSDVHNFGIVLLEILSGRKAY 663
L + D+ + GI+++E++ G Y
Sbjct: 189 SRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 479 DATNGFKEFNELGRGSYGFV-YKAVLVDGRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
D + F ++G GS G V V G+ VAVK+ + + RE E+ ++ +
Sbjct: 21 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRD 77
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+H N+V + L E +V EF+ G L D + + +N + + + L
Sbjct: 78 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSV 135
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD------------------- 637
LH +IHRD+K+ +ILL D +++DFG ++
Sbjct: 136 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 192
Query: 638 --LTTDMKSDVHNFGIVLLEILSGRKAY 663
L + D+ + GI+++E++ G Y
Sbjct: 193 SRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 481 TNGFKEFNELGRGSYGFVYKAVLV-DGRQVAVKRANAATIIHTNIREFEMELEVLCNIRH 539
T+ ++ F ELG+G++ V + + + G++ A K N + + ++ E E + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
NIV L E G LV++ + G L + + + S + LE ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIQQILESVNH 118
Query: 600 DAAPPIIHRDVKTLNILLDSD---WGARIADFGLLTSCERD 637
I+HRD+K N+LL S ++ADFGL + D
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 479 DATNGFKEFNELGRGSYGFV-YKAVLVDGRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
D + F ++G GS G V V G+ VAVK+ + + RE E+ ++ +
Sbjct: 26 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRD 82
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+H N+V + L E +V EF+ G L D + + +N + + + L
Sbjct: 83 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSV 140
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD------------------- 637
LH +IHRD+K+ +ILL D +++DFG ++
Sbjct: 141 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 197
Query: 638 --LTTDMKSDVHNFGIVLLEILSGRKAY 663
L + D+ + GI+++E++ G Y
Sbjct: 198 SRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKFY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 54/217 (24%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGG-LSPLNWSLRLK------ 585
N++ LL F P +L + HL G L+ + S +L
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF 129
Query: 586 ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT------ 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR 186
Query: 640 -------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTN-IREFEMELEVLCN 536
N F+ LG+G++G K +LV GR A+K I+ + + E VL N
Sbjct: 148 NEFEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 537 IRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLE 595
RH + L Y + +RL V E+ G L HL R + L+
Sbjct: 205 SRHP-FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALD 262
Query: 596 YLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
YLH + +++RD+K N++LD D +I DFGL
Sbjct: 263 YLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGL 295
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 484 FKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+ G V Y AVL R VA+K+ + T+ + EL ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 541 NIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
NI++LL E + LV E M L + L S L Q G+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLL---YQMLXGI 139
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIH------TNIREFEMEL 531
+ + + + LG G++GFV+ AV + ++V VK ++ + + +E+
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 532 EVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAA 591
+L + H+NI+ +L G LV E G L+ L I Q
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLV 140
Query: 592 KGLEYLH-KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER 636
+ YL KD IIHRD+K NI++ D+ ++ DFG ER
Sbjct: 141 SAVGYLRLKD----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKFY 71
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 127
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTN-IREFEMELEVLCN 536
N F+ LG+G++G K +LV GR A+K I+ + + E VL N
Sbjct: 151 NEFEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 537 IRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLE 595
RH + L Y + +RL V E+ G L HL R + L+
Sbjct: 208 SRHP-FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALD 265
Query: 596 YLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
YLH + +++RD+K N++LD D +I DFGL
Sbjct: 266 YLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGL 298
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCN--IRHSNIVNLLG 547
LG+G + Y+ +D ++V + +++ ++ +M E+ + + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ + +V E R +L + LH + Q +G++YLH + +IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIH 165
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERD 637
RD+K N+ L+ D +I DFGL T E D
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFD 195
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 47/269 (17%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCN--IRHSNIVNLLG 547
LG+G + Y+ +D ++V + +++ ++ +M E+ + + + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ + +V E R +L + LH + Q +G++YLH + +IH
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIH 149
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDV----------------HNF-- 649
RD+K N+ L+ D +I DFGL T E D + K D+ H+F
Sbjct: 150 RDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKDLCGTPNYIAPEVLCKKGHSFEV 207
Query: 650 -----GIVLLEILSGRKAYDIE-----YVPPGIVEWALPLIKQGKAAAIIDRNVALPRNV 699
G +L +L G+ ++ Y+ E+++P A+A+I R + +
Sbjct: 208 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTL 267
Query: 700 EPLFKLADIAELAIRE------NPSELPT 722
P +AEL E P LPT
Sbjct: 268 RP-----SVAELLTDEFFTSGYAPMRLPT 291
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 484 FKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+ G V Y AVL R VA+K+ + T+ + EL ++ + H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 541 NIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
NI++LL E + LV E M L + L S L Q G+
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLL---YQMLXGI 132
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 133 KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 165
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 71
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 82/181 (45%), Gaps = 19/181 (10%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIRE 526
F E+ D+T +++ +G G+ G V A V G VAVK+ + T+ +
Sbjct: 10 FYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR 69
Query: 527 FEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNW 580
EL +L + H NI++LL E + LV E M L +H L
Sbjct: 70 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERM 128
Query: 581 SLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLL-TSCERDLT 639
S L Q G+++LH IIHRD+K NI++ SD +I DFGL T+C +
Sbjct: 129 SYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMM 182
Query: 640 T 640
T
Sbjct: 183 T 183
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCN--IRHSNIVNLLG 547
LG+G + Y+ +D ++V + +++ ++ +M E+ + + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ + +V E R +L + LH + Q +G++YLH + +IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIH 165
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERD 637
RD+K N+ L+ D +I DFGL T E D
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFD 195
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRL 584
R+F E ++ H N+V+L G ++V EFM G L L +
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLV 148
Query: 585 KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD-----LT 639
+ A G+ YL A +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 149 GMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTT 205
Query: 640 TDMK-------------------SDVHNFGIVLLEILS-GRKAY 663
T K SDV ++GIV+ E++S G + Y
Sbjct: 206 TGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 249
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 490 LGRGSYGFVYKAVLVDGRQV----AVKRANAATIIHTNIREFEM-ELEVLCNIRHSNIVN 544
LG+GS+G K +L D + A+K +I + E M E VL + +
Sbjct: 27 LGKGSFG---KVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 545 LLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
L C + +RL V E++ G L H+ + + + + + GL +LHK
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISIGLFFLHKRG-- 140
Query: 604 PIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMK-------------------- 643
II+RD+K N++LDS+ +IADFG+ D T +
Sbjct: 141 -IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGK 199
Query: 644 -SDVHNFGIVLLEILSGRKAYDIE 666
D +G++L E+L+G+ +D E
Sbjct: 200 SVDWWAYGVLLYEMLAGQPPFDGE 223
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
Query: 484 FKEFNELGRGSYGFVYKAV------LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNI 537
+ + ++LG G+Y VYK LV +++ ++ A T IRE + +L ++
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPC--TAIRE----VSLLKDL 57
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
+H+NIV L LV+E++ + L +L + +N Q +GL Y
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYLDKD-LKQYLDDCGNIINMHNVKLFLFQLLRGLAYC 116
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H+ ++HRD+K N+L++ ++ADFGL
Sbjct: 117 HRQK---VLHRDLKPQNLLINERGELKLADFGL 146
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 89/225 (39%), Gaps = 40/225 (17%)
Query: 471 VFRLSELKDATN-------GFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN 523
V ++ DATN G EF E+ G K + VA+K
Sbjct: 6 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI----SVAIKTLKVG-YTEKQ 60
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
R+F E ++ H NI+ L G + ++V E M G+L L +
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 120
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LT 639
+ + A G++YL +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 121 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 640 T--------------------DMKSDVHNFGIVLLEILS-GRKAY 663
T SDV ++GIVL E++S G + Y
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 484 FKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+ G V Y AVL R VA+K+ + T+ + EL ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 541 NIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
NI++LL E + LV E M L + L S L Q G+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSYLL---YQMLCGI 139
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINAMLNHENVVKFY 71
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 127
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 33/210 (15%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRH- 539
N + E+G G+ G V+K G +AVK+ + N R M+L+V+
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRIL-MDLDVVLKSHDC 83
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLS-PLNWSLRLKISMQAAKGLEYLH 598
IV G + + + E M GT + L + P+ + K+++ K L YL
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK 141
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFG----LLTSCERDLTT-------------- 640
+ +IHRDVK NILLD ++ DFG L+ +D +
Sbjct: 142 EKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPP 199
Query: 641 -------DMKSDVHNFGIVLLEILSGRKAY 663
D+++DV + GI L+E+ +G+ Y
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFPY 229
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKXQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 71
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 71
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 71
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 490 LGRGSYGFVYKAVLVDGRQ-VAVKRANA--ATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
+G G+YG V A RQ VAVK+ + ++IH R EL +L +++H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHA--RRTYRELRLLKHLKHENVIGLL 93
Query: 547 GYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
+ E LV M + LS + + Q +GL+Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF---LVYQLLRGLKYIHSA 150
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT 639
IIHRD+K N+ ++ D RI DFGL + ++T
Sbjct: 151 G---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT 186
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Query: 484 FKEFNELGRGSYGFVYKAVLV-DGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
++ F ELG+G++ V + V V G++ A K N + + ++ E E + ++H NI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAA 602
V L E G L+++ + G L + + + S + LE +
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFE----DIVAREYYSEADASHCIQQILEAVLHCHQ 139
Query: 603 PPIIHRDVKTLNILLDSDW---GARIADFGLLTSCE 635
++HRD+K N+LL S ++ADFGL E
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE 175
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 89/225 (39%), Gaps = 40/225 (17%)
Query: 471 VFRLSELKDATN-------GFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN 523
V ++ DATN G EF E+ G K + VA+K
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI----SVAIKTLKVG-YTEKQ 89
Query: 524 IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLR 583
R+F E ++ H NI+ L G + ++V E M G+L L +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 149
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LT 639
+ + A G++YL +HRD+ NIL++S+ +++DFGL E D T
Sbjct: 150 VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 640 T--------------------DMKSDVHNFGIVLLEILS-GRKAY 663
T SDV ++GIVL E++S G + Y
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 86
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 87 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 132
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 133 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 189
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 100
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 101 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 146
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 147 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 203
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 65/243 (26%)
Query: 467 GMAQ---VFRLSELK----DATNGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA-- 516
GM+Q F EL + ++ + +G G+YG V A G +VAVK+ +
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 517 ATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHD------- 569
+IIH R + EL +L +++H N++ LL F P +L +
Sbjct: 71 QSIIHAK-RTYR-ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLV 116
Query: 570 -HLHGGLSPLNWSLRLK---------ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS 619
HL G + LN ++ + + Q +GL+Y+H + IIHRD+K N+ ++
Sbjct: 117 THLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 171
Query: 620 DWGARIADFGLLTSCERDLT-------------------TDMKSDVHNFGIVLLEILSGR 660
D +I DFGL + ++T + D+ + G ++ E+L+GR
Sbjct: 172 DXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
Query: 661 KAY 663
+
Sbjct: 232 TLF 234
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 101
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 102 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 147
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 148 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 204
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 489 ELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
ELG G++G V++ G A K T ++ E++ + +RH +VNL
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFV--MTPHESDKETVRKEIQTMSVLRHPTLVNLHD 221
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ E +++YEFM G L + + + ++ ++ Q KGL ++H++ +H
Sbjct: 222 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 278
Query: 608 RDVKTLNILLDSDWGA--RIADFGL 630
D+K NI+ + ++ DFGL
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGL 303
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 77
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 78 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 123
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 124 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 180
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 69
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 125
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLAT 151
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 481 TNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRH 539
T+ ++ + ++G+G++ V + V L G + A K N + + ++ E E + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
SNIV L E G LV++ + G L + + + S + LE +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIQQILEAVLH 118
Query: 600 DAAPPIIHRDVKTLNILLDSD---WGARIADFGLLTSCERD 637
++HRD+K N+LL S ++ADFGL + D
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD 159
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKXQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 71
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 127
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 33/201 (16%)
Query: 487 FNELGRGSYGFVYKAVLV-DGRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRHSNIVN 544
+ ++G GS G V A GRQVAVK + + RE E+ ++ + +H N+V
Sbjct: 50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMD---LRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 545 LLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
+ L +GE L ++ EF+ G L D + LN + + L YLH A
Sbjct: 107 MYKSYL-VGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLH---AQ 160
Query: 604 PIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD---------------------M 642
+IHRD+K+ +ILL D +++DFG +D+
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYAT 220
Query: 643 KSDVHNFGIVLLEILSGRKAY 663
+ D+ + GI+++E++ G Y
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPY 241
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 484 FKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+ G V Y AVL R VA+K+ + T+ + EL ++ + H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 541 NIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
NI++LL E + LV E M L + L S L Q G+
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL---YQMLCGI 177
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 178 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 71
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 127
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 86
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 87 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 132
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 133 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 189
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAK-RTYR-ELRLLKHMKHE 93
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 94 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 139
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 140 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 35/168 (20%)
Query: 490 LGRGSYGFVYKAVLVDGRQ-VAVKRANA--ATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
+G G+YG V A RQ VAVK+ + ++IH R EL +L +++H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHA--RRTYRELRLLKHLKHENVIGLL 93
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGL------SPLNWSLRLK---------ISMQAA 591
F P ++ D L + LN ++ + + Q
Sbjct: 94 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 141
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT 639
+GL+Y+H IIHRD+K N+ ++ D RI DFGL + ++T
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT 186
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 83
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 84 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 129
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 130 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA 186
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 54/217 (24%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 77
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGG-LSPLNWSLRLK------ 585
N++ LL F P +L + HL G L+ + +L
Sbjct: 78 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF 125
Query: 586 ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT------ 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 126 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 182
Query: 640 -------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 65/243 (26%)
Query: 467 GMAQ---VFRLSELK----DATNGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA-- 516
GM+Q F EL + ++ + +G G+YG V A G +VAVK+ +
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 517 ATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHD------- 569
+IIH R + EL +L +++H N++ LL F P +L +
Sbjct: 71 QSIIHAK-RTYR-ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLV 116
Query: 570 -HLHGGLSPLNWSLRLK---------ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS 619
HL G + LN ++ + + Q +GL+Y+H + IIHRD+K N+ ++
Sbjct: 117 THLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 171
Query: 620 DWGARIADFGLLTSCERDLT-------------------TDMKSDVHNFGIVLLEILSGR 660
D +I DFGL + ++T + D+ + G ++ E+L+GR
Sbjct: 172 DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
Query: 661 KAY 663
+
Sbjct: 232 TLF 234
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDGRQ-VAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
+++ ++G G+YG V+KA + + VA+KR E+ +L ++H NI
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 543 VNLLGYCLEMGERLLVYEFMPR--GTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD 600
V L + LV+EF + D +G L P + Q KGL + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCHSR 120
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++HRD+K N+L++ + ++A+FGL
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLANFGL 147
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 93
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 94 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 139
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 140 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 489 ELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
ELG G++G V++ G A K T ++ E++ + +RH +VNL
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAK--FVMTPHESDKETVRKEIQTMSVLRHPTLVNLHD 115
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ E +++YEFM G L + + + ++ ++ Q KGL ++H++ +H
Sbjct: 116 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 172
Query: 608 RDVKTLNILLDSDWGA--RIADFGL 630
D+K NI+ + ++ DFGL
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGL 197
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 93
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 94 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 139
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 140 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+YG V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMK 643
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T +
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVA 184
Query: 644 S-------------------DVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 35/168 (20%)
Query: 490 LGRGSYGFVYKAVLVDGRQ-VAVKRANA--ATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
+G G+YG V A RQ VAVK+ + ++IH R EL +L +++H N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHA--RRTYRELRLLKHLKHENVIGLL 85
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGL------SPLNWSLRLK---------ISMQAA 591
F P ++ D L + LN ++ + + Q
Sbjct: 86 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 133
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT 639
+GL+Y+H IIHRD+K N+ ++ D RI DFGL + ++T
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT 178
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 87
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 88 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 133
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 134 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA 190
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 87
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 88 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 133
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 134 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 39/189 (20%)
Query: 507 RQVAVK--RANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGER------LLV 558
R VAVK RA+ A +R F E + + H IV + Y E +V
Sbjct: 38 RDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIV 94
Query: 559 YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLD 618
E++ TL D +H P+ +++ A + L + H++ IIHRDVK NI++
Sbjct: 95 MEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMIS 150
Query: 619 SDWGARIADFGLLTSC------------------------ERDLTTDMKSDVHNFGIVLL 654
+ ++ DFG+ + R + D +SDV++ G VL
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 655 EILSGRKAY 663
E+L+G +
Sbjct: 211 EVLTGEPPF 219
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 103
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+C + E+L + G L ++ + + + + + LEYLH II
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 159
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 160 HRDLKPENILLNEDMHIQITDFG 182
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 100
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 101 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 146
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 147 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 203
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 481 TNGFKEFNELGRGSYGFVYKAVL-VDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRH 539
T+ ++ F ELG+G++ V + V ++ A K N + + ++ E E + ++H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
NIV L E G LV++ + G L + + + S + LE ++
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIHQILESVNH 145
Query: 600 DAAPPIIHRDVKTLNILLDSD---WGARIADFGL 630
I+HRD+K N+LL S ++ADFGL
Sbjct: 146 IHQHDIVHRDLKPENLLLASKCKGAAVKLADFGL 179
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 79
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 80 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 125
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 126 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 182
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 484 FKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
+++ +G G+ G V A V G VAVK+ + T+ + EL +L + H NI
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 543 VNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
++LL E + LV E M L +H L S L Q G+++
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSYLL---YQMLCGIKH 139
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LH IIHRD+K NI++ SD +I DFGL
Sbjct: 140 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 170
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 86
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 87 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 132
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 133 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 189
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 77
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 78 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 123
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 124 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 180
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 80
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 81 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 126
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 127 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 183
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 104
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 105 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 150
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 151 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 207
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 82/205 (40%), Gaps = 35/205 (17%)
Query: 490 LGRGSYGFVYKAVL-VDGRQ---VAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNL 545
+G G +G V + L G++ VA+K REF E ++ H NI+ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGG-YTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 546 LGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G +++ EFM G L L + + A G+ YL A
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSY 139
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMK---------------------- 643
+HRD+ NIL++S+ +++DFGL E + + +
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 644 ----SDVHNFGIVLLEILS-GRKAY 663
SD ++GIV+ E++S G + Y
Sbjct: 200 FTSASDAWSYGIVMWEVMSFGERPY 224
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 83
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 84 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 129
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 130 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 101
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 102 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 147
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 148 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 204
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 88
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 89 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 134
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 135 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 191
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 91
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 92 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 137
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 138 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 194
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 83
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 84 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 129
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 130 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 82/207 (39%), Gaps = 39/207 (18%)
Query: 490 LGRGSYGFVYKAVL-VDGRQ---VAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNL 545
+G G +G V + L G++ VA+K REF E ++ H NI+ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGG-YTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 546 LGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G +++ EFM G L L + + A G+ YL A
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSY 137
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCE----------------------------RD 637
+HRD+ NIL++S+ +++DFGL E R
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRK 197
Query: 638 LTTDMKSDVHNFGIVLLEILS-GRKAY 663
T+ SD ++GIV+ E++S G + Y
Sbjct: 198 FTS--ASDAWSYGIVMWEVMSFGERPY 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 83
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 84 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 129
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 130 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 78
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 79 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 124
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 125 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 181
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 484 FKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+ G V Y AVL R VA+K+ + T+ + EL ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 541 NIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
NI++LL E + LV E M L + L S L Q G+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSYLL---YQMLCGI 139
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++LH + IIHRD+K NI++ SD +I DFGL
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 78
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 79 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 124
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 125 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 181
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 479 DATNGFKEFNE-LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCN 536
D + E +E +G G + V A ++ G VA+K + T+ +++ + E+E L N
Sbjct: 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL-GSDLPRIKTEIEALKN 64
Query: 537 IRHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLE 595
+RH +I L + LE ++ +V E+ P G L D++ R+ + Q +
Sbjct: 65 LRHQHICQLY-HVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVA 122
Query: 596 YLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
Y+H HRD+K N+L D ++ DFGL
Sbjct: 123 YVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGL 154
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 86
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 87 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 132
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 133 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 189
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 33/203 (16%)
Query: 490 LGRGSYGFVYKAVL-VDGRQ---VAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNL 545
+G G +G V L V G++ VA+K A R+F E ++ H NI++L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAG-YTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 546 LGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G + +++ E+M G+L L + + G++YL +
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS---Y 131
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERD----LTT--------------------D 641
+HRD+ NIL++S+ +++DFG+ E D TT
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 191
Query: 642 MKSDVHNFGIVLLEILS-GRKAY 663
SDV ++GIV+ E++S G + Y
Sbjct: 192 SASDVWSYGIVMWEVMSYGERPY 214
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 87
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 88 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 133
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 134 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y AVL R VA+K+ + T+
Sbjct: 48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 105
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI++LL E + LV E M L + L
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHE 164
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 165 RMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 33/203 (16%)
Query: 490 LGRGSYGFVYKAVL-VDGRQ---VAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNL 545
+G G +G V L V G++ VA+K A R+F E ++ H NI++L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAG-YTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 546 LGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
G + +++ E+M G+L L + + G++YL +
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS---Y 137
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERD----LTT--------------------D 641
+HRD+ NIL++S+ +++DFG+ E D TT
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 197
Query: 642 MKSDVHNFGIVLLEILS-GRKAY 663
SDV ++GIV+ E++S G + Y
Sbjct: 198 SASDVWSYGIVMWEVMSYGERPY 220
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 18/183 (9%)
Query: 459 PHPASACPGMAQVFRLSE-LKDATNGFKE----FNELGRGSYGFVYKAV-LVDGRQVAVK 512
PH AS G Q+ R SE + +A+ F + ELG+G++ V + V G + A K
Sbjct: 2 PHMASMTGGQ-QMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK 60
Query: 513 RANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL- 571
N + + ++ E E + ++H NIV L E LV++ + G L + +
Sbjct: 61 IINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV 120
Query: 572 -HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSD---WGARIAD 627
S + S ++ Q + + Y H + I+HR++K N+LL S ++AD
Sbjct: 121 AREFYSEADASHCIQ---QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLAD 174
Query: 628 FGL 630
FGL
Sbjct: 175 FGL 177
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 43/191 (22%)
Query: 507 RQVAVK--RANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGER--------L 556
R VAVK RA+ A +R F E + + H IV + + GE
Sbjct: 38 RDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAVY----DTGEAETPAGPLPY 92
Query: 557 LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNIL 616
+V E++ TL D +H P+ +++ A + L + H++ IIHRDVK NI+
Sbjct: 93 IVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 617 LDSDWGARIADFGLLTSC------------------------ERDLTTDMKSDVHNFGIV 652
+ + ++ DFG+ + R + D +SDV++ G V
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 653 LLEILSGRKAY 663
L E+L+G +
Sbjct: 209 LYEVLTGEPPF 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 67
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHE 126
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSC 634
S L Q G+++LH IIHRD+K NI++ SD +I DFGL +
Sbjct: 127 RMSYLL---YQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 11/170 (6%)
Query: 466 PGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR 525
PG + R + +D + + + LG G++ V A +++ + A +
Sbjct: 2 PGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG 61
Query: 526 EFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLR 583
E E+ VL I+H NIV L G L+ + + G L D + G + + S
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-- 119
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNIL---LDSDWGARIADFGL 630
++ Q ++YLH I+HRD+K N+L LD D I+DFGL
Sbjct: 120 -RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGL 165
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 67
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHE 126
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSC 634
S L Q G+++LH IIHRD+K NI++ SD +I DFGL +
Sbjct: 127 RMSYLL---YQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 32/167 (19%)
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRL 584
R+F E ++ H N+++L G + +++ EFM G+L L +
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 112
Query: 585 KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD--- 641
+ A G++YL A +HR + NIL++S+ +++DFGL E D T+D
Sbjct: 113 GMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDD-TSDPTY 168
Query: 642 ------------------------MKSDVHNFGIVLLEILS-GRKAY 663
SDV ++GIV+ E++S G + Y
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 215
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 87
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 88 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 133
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++T
Sbjct: 134 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 490 LGRGSYGFVYKAVLVDG-RQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG- 547
+GRGSYG+VY A + + VA+K+ N R FE ++ +R I+N L
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVN---------RMFEDLIDCKRILREITILNRLKS 86
Query: 548 -YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISM--QAAK--------GLEY 596
Y + + + ++ + + L+ L S L + I + Q K G ++
Sbjct: 87 DYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDV 646
+H+ IIHRD+K N LL+ D +I DFGL + D + +D+
Sbjct: 147 IHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDL 193
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 88
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 89 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 134
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL ++T
Sbjct: 135 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 22/175 (12%)
Query: 469 AQVFRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIH 521
A F E+ D+T ++ +G G+ G V Y AVL R VA+K+ +
Sbjct: 1 ANQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQ 58
Query: 522 TNIREFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGL 575
T+ + EL ++ + H NI++LL E + LV E M L + L
Sbjct: 59 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMEL 117
Query: 576 SPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 118 DHERMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAIL--ERNVAIKKLSRPFQNQTHA 67
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHE 126
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSC 634
S L Q G+++LH IIHRD+K NI++ SD +I DFGL +
Sbjct: 127 RMSYLL---YQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 88
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 89 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 134
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL ++T
Sbjct: 135 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 101
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 102 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 147
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMK 643
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++ +
Sbjct: 148 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVA 204
Query: 644 S-------------------DVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 88
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 89 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 134
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL ++T
Sbjct: 135 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 484 FKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+ G V Y AVL R VA+K+ + T+ + EL ++ + H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 541 NIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
NI++LL E + LV E M L + L S L Q G+
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL---YQMLCGI 140
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 141 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 484 FKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+ G V Y AVL R VA+K+ + T+ + EL ++ + H
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 82
Query: 541 NIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
NI++LL E + LV E M L + L S L Q G+
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL---YQMLCGI 138
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 139 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 171
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 28/164 (17%)
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRL 584
R+F E ++ H NI++L G + ++V E+M G+L L +
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLV 127
Query: 585 KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD----LTT 640
+ + G++YL +HRD+ NIL++S+ +++DFGL E D TT
Sbjct: 128 GMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 184
Query: 641 --------------------DMKSDVHNFGIVLLEILS-GRKAY 663
SDV ++GIV+ E++S G + Y
Sbjct: 185 RGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY 228
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 484 FKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+ G V Y AVL R VA+K+ + T+ + EL ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 541 NIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
NI++LL E + LV E M L + L S L Q G+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL---YQMLCGI 139
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 484 FKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+ G V Y AVL R VA+K+ + T+ + EL ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 541 NIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
NI++LL E + LV E M L + L S L Q G+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL---YQMLCGI 139
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 98/248 (39%), Gaps = 50/248 (20%)
Query: 449 LDTDAIADSLPHPASACPGMAQVFR-LSELKDATNGFKEFNELGRGSYGFVYKAVLVDGR 507
+DT+ P P + R L L+D ELG G++G V K
Sbjct: 343 MDTEVFESPFADPEEIRPKEVYLDRKLLTLED--------KELGSGNFGTVKKGYY---- 390
Query: 508 QVAVKRANAATIIHTN-------IREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYE 560
Q+ A I N E E V+ + + IV ++G C E +LV E
Sbjct: 391 QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVME 449
Query: 561 FMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSD 620
G L+ +L + ++ +++ Q + G++YL + +HRD+ N+LL +
Sbjct: 450 MAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQ 505
Query: 621 WGARIADFGLLTSCERD------------------------LTTDMKSDVHNFGIVLLEI 656
A+I+DFGL + D KSDV +FG+++ E
Sbjct: 506 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 565
Query: 657 LS-GRKAY 663
S G+K Y
Sbjct: 566 FSYGQKPY 573
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 43/191 (22%)
Query: 507 RQVAVK--RANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGER--------L 556
R VAVK RA+ A +R F E + + H IV + + GE
Sbjct: 55 RDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAVY----DTGEAETPAGPLPY 109
Query: 557 LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNIL 616
+V E++ TL D +H P+ +++ A + L + H++ IIHRDVK NI+
Sbjct: 110 IVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 165
Query: 617 LDSDWGARIADFGLLTSC------------------------ERDLTTDMKSDVHNFGIV 652
+ + ++ DFG+ + R + D +SDV++ G V
Sbjct: 166 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 225
Query: 653 LLEILSGRKAY 663
L E+L+G +
Sbjct: 226 LYEVLTGEPPF 236
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 484 FKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+ G V Y AVL R VA+K+ + T+ + EL ++ + H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 541 NIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
NI++LL E + LV E M L + L S L Q G+
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL---YQMLCGI 140
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 141 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 77
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 78 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 123
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++
Sbjct: 124 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 180
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I D+GL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 81/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ + H NI
Sbjct: 53 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKLNHQNI 110
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 171 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG+GS+G V A + + G AVK I+ + E M E +L R+
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 540 SNIVNLLGYCLEMGERLL-VYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ L C + +RL V EF+ G L H+ R + + L +LH
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMFLH 141
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
II+RD+K N+LLD + ++ADFG+
Sbjct: 142 DKG---IIYRDLKLDNVLLDHEGHCKLADFGM 170
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
+G+G +G V++ G +VAVK ++ + RE E+ V+ +RH NI+ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVM--LRHENILGFIAAD 72
Query: 550 LE----MGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD----- 600
+ + LV ++ G+L D+L+ + ++L +S A GL +LH +
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALS--TASGLAHLHMEIVGTQ 130
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD 641
P I HRD+K+ NIL+ + IAD GL + D TD
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATD 169
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 484 FKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+ G V Y AVL R VA+K+ + T+ + EL ++ + H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 541 NIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
NI++LL E + LV E M L + L S L Q G+
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL---YQMLCGI 132
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 133 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 165
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 484 FKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
++ +G G+ G V Y AVL R VA+K+ + T+ + EL ++ + H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 541 NIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
NI++LL E + LV E M L + L S L Q G+
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL---YQMLCGI 133
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 134 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 484 FKEFNELGRGSYGFVYK----AVLVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIR 538
+ +LG GS+G V + A VAVK + + +F E+ + ++
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
H N++ L G L ++ V E P G+L D L + ++Q A+G+ YL
Sbjct: 80 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
IHRD+ N+LL + +I DFGL+ + ++
Sbjct: 139 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
+G+G +G V++ G +VAVK ++ + RE E+ V+ +RH NI+ +
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVM--LRHENILGFIAAD 67
Query: 550 LE----MGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD----- 600
+ + LV ++ G+L D+L+ + ++L +S A GL +LH +
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALS--TASGLAHLHMEIVGTQ 125
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD 641
P I HRD+K+ NIL+ + IAD GL + D TD
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATD 164
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 8/185 (4%)
Query: 480 ATNGFKEFNELGRGSYGFVYK-AVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
N F+++ LG+G +G V V G+ A K+ I + + +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 539 HSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHL-HGGLSPLNWSLRLKISMQAAKGLEY 596
+S V L Y E + L LV M G L H+ H G + + + + + GLE
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLED 301
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVLLEI 656
LH++ I++RD+K NILLD RI+D GL T +K V G + E+
Sbjct: 302 LHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEV 356
Query: 657 LSGRK 661
+ +
Sbjct: 357 VKNER 361
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
+G+G +G V++ G +VAVK ++ + RE E+ V+ +RH NI+ +
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVM--LRHENILGFIAAD 69
Query: 550 LE----MGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD----- 600
+ + LV ++ G+L D+L+ + ++L +S A GL +LH +
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALS--TASGLAHLHMEIVGTQ 127
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD 641
P I HRD+K+ NIL+ + IAD GL + D TD
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATD 166
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIR 538
+ +LG GS+G V + A VAVK + + +F E+ + ++
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
H N++ L G L ++ V E P G+L D L + ++Q A+G+ YL
Sbjct: 74 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
IHRD+ N+LL + +I DFGL+ + ++
Sbjct: 133 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 168
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 486 EFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN-------IREFEMELEVLCNIR 538
E ELG G++G V K Q+ A I N E E V+ +
Sbjct: 374 EDKELGSGNFGTVKKGYY----QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 429
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ IV ++G C E +LV E G L+ +L + ++ +++ Q + G++YL
Sbjct: 430 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLE 487
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD--------------------- 637
+ +HRD+ N+LL + A+I+DFGL + D
Sbjct: 488 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 544
Query: 638 ---LTTDMKSDVHNFGIVLLEILS-GRKAY 663
KSDV +FG+++ E S G+K Y
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 574
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 484 FKEFNELGRGSYGFVYK----AVLVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIR 538
+ +LG GS+G V + A VAVK + + +F E+ + ++
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
H N++ L G L ++ V E P G+L D L + ++Q A+G+ YL
Sbjct: 80 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
IHRD+ N+LL + +I DFGL+ + ++
Sbjct: 139 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
+G+G +G V++ G +VAVK ++ + RE E+ V+ +RH NI+ +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVM--LRHENILGFIAAD 66
Query: 550 LE----MGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD----- 600
+ + LV ++ G+L D+L+ + ++L +S A GL +LH +
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALS--TASGLAHLHMEIVGTQ 124
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD 641
P I HRD+K+ NIL+ + IAD GL + D TD
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATD 163
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
+G+G +G V++ G +VAVK ++ + RE E+ V+ +RH NI+ +
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVM--LRHENILGFIAAD 92
Query: 550 LE----MGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD----- 600
+ + LV ++ G+L D+L+ + ++L +S A GL +LH +
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALS--TASGLAHLHMEIVGTQ 150
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD 641
P I HRD+K+ NIL+ + IAD GL + D TD
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATD 189
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
+G+G +G V++ G +VAVK ++ + RE E+ V+ +RH NI+ +
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVM--LRHENILGFIAAD 105
Query: 550 LE----MGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKD----- 600
+ + LV ++ G+L D+L+ + ++L +S A GL +LH +
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALS--TASGLAHLHMEIVGTQ 163
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTD 641
P I HRD+K+ NIL+ + IAD GL + D TD
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATD 202
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 67
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHE 126
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 127 RMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 81/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ + H NI
Sbjct: 39 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKLNHQNI 96
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 157 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ H NI
Sbjct: 38 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNI 95
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 156 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ H NI
Sbjct: 38 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNI 95
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 156 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ H NI
Sbjct: 53 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNI 110
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 171 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ H NI
Sbjct: 30 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNI 87
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 148 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 204
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G G+YG V A+ G +VA+K+ + + EL +L +++H N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 549 CLEMGERLLVYEF---MPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
Y+F MP GL ++ + Q KGL+Y+H +
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-LVYQMLKGLKYIHSAG---V 147
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLT 639
+HRD+K N+ ++ D +I DFGL + ++T
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLARHADAEMT 181
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ H NI
Sbjct: 53 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVYSEQDEL-DFLMEALIISKFNHQNI 110
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 171 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 484 FKEFNELGRGSYGFVYK----AVLVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIR 538
+ +LG GS+G V + A VAVK + + +F E+ + ++
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
H N++ L G L ++ V E P G+L D L + ++Q A+G+ YL
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
IHRD+ N+LL + +I DFGL+ + ++
Sbjct: 129 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ H NI
Sbjct: 39 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNI 96
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 157 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWM 213
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 103/266 (38%), Gaps = 43/266 (16%)
Query: 489 ELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHTNIREFEMELEV-LCNIRHSNIVNLL 546
ELGRG+YG V K V Q+ AVKR A T+ + +L++ + V
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRA-TVNSQEQKRLLXDLDISXRTVDCPFTVTFY 99
Query: 547 GYCLEMGERLLVYEFMPRG--TLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPP 604
G G+ + E + + + + KI++ K LE+LH +
Sbjct: 100 GALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 157
Query: 605 IIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDM---------------------- 642
+IHRDVK N+L+++ + DFG+ D+ D+
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGY 217
Query: 643 --KSDVHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRNVE 700
KSD+ + GI +E+ R YD W P Q + + + LP + +
Sbjct: 218 SVKSDIWSLGITXIELAILRFPYD---------SWGTPF--QQLKQVVEEPSPQLPAD-K 265
Query: 701 PLFKLADIAELAIRENPSELPTMSQV 726
+ D +++N E PT ++
Sbjct: 266 FSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 104
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 105 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 150
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DFGL + ++
Sbjct: 151 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVA 207
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIR 538
+ +LG GS+G V + A VAVK + + +F E+ + ++
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
H N++ L G L ++ V E P G+L D L + ++Q A+G+ YL
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
IHRD+ N+LL + +I DFGL+ + ++
Sbjct: 129 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ H NI
Sbjct: 56 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNI 113
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 174 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 8/185 (4%)
Query: 480 ATNGFKEFNELGRGSYGFVYK-AVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIR 538
N F+++ LG+G +G V V G+ A K+ I + + +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 539 HSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHL-HGGLSPLNWSLRLKISMQAAKGLEY 596
+S V L Y E + L LV M G L H+ H G + + + + + GLE
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLED 301
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVLLEI 656
LH++ I++RD+K NILLD RI+D GL T +K V G + E+
Sbjct: 302 LHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEV 356
Query: 657 LSGRK 661
+ +
Sbjct: 357 VKNER 361
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 31/182 (17%)
Query: 473 RLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR-----EF 527
+L E+ + F E ELG +G VYK L +A A + EF
Sbjct: 2 KLKEISLSAVRFME--ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 59
Query: 528 EMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL---------------- 571
E + ++H N+V LLG + +++ + G LH+ L
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 572 --HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG 629
L P ++ + + Q A G+EYL ++ ++H+D+ T N+L+ +I+D G
Sbjct: 120 TVKSALEPPDF---VHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLG 173
Query: 630 LL 631
L
Sbjct: 174 LF 175
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 31/182 (17%)
Query: 473 RLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIR-----EF 527
+L E+ + F E ELG +G VYK L +A A + EF
Sbjct: 19 KLKEISLSAVRFME--ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 76
Query: 528 EMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL---------------- 571
E + ++H N+V LLG + +++ + G LH+ L
Sbjct: 77 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136
Query: 572 --HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG 629
L P ++ + + Q A G+EYL ++ ++H+D+ T N+L+ +I+D G
Sbjct: 137 TVKSALEPPDF---VHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLG 190
Query: 630 LL 631
L
Sbjct: 191 LF 192
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 481 TNGFKEFNELGRGSYGFVYKAVLV-DGRQVAVKRANAATIIHTNIREFEMELEVLCNIRH 539
T ++ F ELG+G++ V + V V G++ A N + + ++ E E + ++H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
NIV L E G L+++ + G L + + + S + LE +
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFE----DIVAREYYSEADASHCIQQILEAVLH 125
Query: 600 DAAPPIIHRDVKTLNILLDSDW---GARIADFGLLTSCE 635
++HR++K N+LL S ++ADFGL E
Sbjct: 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 484 FKEFNELGRGSYGFVYK----AVLVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIR 538
+ +LG GS+G V + A VAVK + + +F E+ + ++
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
H N++ L G L ++ V E P G+L D L + ++Q A+G+ YL
Sbjct: 74 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
IHRD+ N+LL + +I DFGL+ + ++
Sbjct: 133 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 168
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ H NI
Sbjct: 39 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNI 96
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 157 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDG----RQVAVKRANAATIIHT--NIREFEMELEVLCNI 537
F+ LG+G YG V++ V G + A+K A I+ + + E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 538 RHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRL-KISMQAAKG 593
+H IV+L+ Y + G +L L+ E++ G L L G L +ISM
Sbjct: 79 KHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM----A 133
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
L +LH+ II+RD+K NI+L+ ++ DFGL
Sbjct: 134 LGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ H NI
Sbjct: 79 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNI 136
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 197 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 484 FKEFNELGRGSYGFVYKAVLVDG----RQVAVKRANAATIIHT--NIREFEMELEVLCNI 537
F+ LG+G YG V++ V G + A+K A I+ + + E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 538 RHSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRL-KISMQAAKG 593
+H IV+L+ Y + G +L L+ E++ G L L G L +ISM
Sbjct: 79 KHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM----A 133
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
L +LH+ II+RD+K NI+L+ ++ DFGL
Sbjct: 134 LGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 484 FKEFNELGRGSYGFV----YKAVLVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIR 538
+ +LG GS+G V + A VAVK + + +F E+ + ++
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
H N++ L G L ++ V E P G+L D L + ++Q A+G+ YL
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
IHRD+ N+LL + +I DFGL+ + ++
Sbjct: 129 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ H NI
Sbjct: 55 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNI 112
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 173 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 229
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 67
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHE 126
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 127 RMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G G+YG V A+ G +VA+K+ + + EL +L +++H N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 549 CLEMGERLLVYEF---MPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
Y+F MP G+ ++ + Q KGL+Y+H +
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-LVYQMLKGLKYIHSAG---V 165
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLT 639
+HRD+K N+ ++ D +I DFGL + ++T
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLARHADAEMT 199
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ H NI
Sbjct: 45 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNI 102
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 163 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 219
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 67
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHE 126
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 127 RMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 41/215 (19%)
Query: 483 GFKEFNEL---GRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRH 539
G ++F+ L GRGSY K +LV R R A ++ + + +++ + +H
Sbjct: 50 GLQDFDLLRVIGRGSYA---KVLLV--RLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH 104
Query: 540 -----SNIVNLLGY--CLEMGERLL-VYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAA 591
SN L+G C + RL V E++ G L H+ R S + +
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEIS 163
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER--DLTTD-------- 641
L YLH+ II+RD+K N+LLDS+ ++ D+G+ R D T+
Sbjct: 164 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYI 220
Query: 642 ----MKSDVHNF-------GIVLLEILSGRKAYDI 665
++ + + F G+++ E+++GR +DI
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 41/215 (19%)
Query: 483 GFKEFNEL---GRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRH 539
G ++F+ L GRGSY K +LV R R A ++ + + +++ + +H
Sbjct: 18 GLQDFDLLRVIGRGSYA---KVLLV--RLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 72
Query: 540 -----SNIVNLLGY--CLEMGERLL-VYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAA 591
SN L+G C + RL V E++ G L H+ R S + +
Sbjct: 73 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEIS 131
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER--DLTTD-------- 641
L YLH+ II+RD+K N+LLDS+ ++ D+G+ R D T+
Sbjct: 132 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 188
Query: 642 ----MKSDVHNF-------GIVLLEILSGRKAYDI 665
++ + + F G+++ E+++GR +DI
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 223
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 486 EFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN-------IREFEMELEVLCNIR 538
E ELG G++G V K Q+ A I N E E V+ +
Sbjct: 29 EDKELGSGNFGTVKKGYY----QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 84
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ IV ++G C E +LV E G L+ +L + ++ +++ Q + G++YL
Sbjct: 85 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLE 142
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD--------------------- 637
+ +HRD+ N+LL + A+I+DFGL + D
Sbjct: 143 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 638 ---LTTDMKSDVHNFGIVLLEILS-GRKAY 663
KSDV +FG+++ E S G+K Y
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 229
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
N F +GRG +G VY D G+ A+K + I + ++ ++ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 541 N---IVNLLGYCLEMGERL-LVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGL 594
+ + Y ++L + + M G LH HL HG S + + + GL
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF---YAAEIILGL 305
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVLL 654
E++H +++RD+K NILLD RI+D GL +C+ S V G +
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGL--ACDFSKKKPHAS-VGTHGYMAP 359
Query: 655 EILSGRKAYD 664
E+L AYD
Sbjct: 360 EVLQKGVAYD 369
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
N F +GRG +G VY D G+ A+K + I + ++ ++ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 541 N---IVNLLGYCLEMGERL-LVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGL 594
+ + Y ++L + + M G LH HL HG S + + + GL
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF---YAAEIILGL 305
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVLL 654
E++H +++RD+K NILLD RI+D GL +C+ S V G +
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGL--ACDFSKKKPHAS-VGTHGYMAP 359
Query: 655 EILSGRKAYD 664
E+L AYD
Sbjct: 360 EVLQKGVAYD 369
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 25/170 (14%)
Query: 490 LGRGSYGFVYKAVLVDG-RQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL-- 546
+GRGSYG+VY A + + VA+K+ N R FE ++ +R I+N L
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVN---------RMFEDLIDCKRILREITILNRLKS 84
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAK----------GLEY 596
Y + + + ++ + + L+ L S L + I + G +
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDV 646
+H+ IIHRD+K N LL+ D ++ DFGL + + T++ +D+
Sbjct: 145 IHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDL 191
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I DF L + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 530 ELEVLCNIR-HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISM 588
E+++L + H NI+ L LV++ M +G L D+L ++ R KI
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMR 131
Query: 589 QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKS 644
+ + LHK I+HRD+K NILLD D ++ DFG SC+ D ++S
Sbjct: 132 ALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGEKLRS 182
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 41/215 (19%)
Query: 483 GFKEFNEL---GRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRH 539
G ++F+ L GRGSY K +LV R R A ++ + + +++ + +H
Sbjct: 7 GLQDFDLLRVIGRGSYA---KVLLV--RLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 61
Query: 540 -----SNIVNLLGY--CLEMGERLL-VYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAA 591
SN L+G C + RL V E++ G L H+ R S + +
Sbjct: 62 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEIS 120
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER--DLTTD-------- 641
L YLH+ II+RD+K N+LLDS+ ++ D+G+ R D T+
Sbjct: 121 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 177
Query: 642 ----MKSDVHNF-------GIVLLEILSGRKAYDI 665
++ + + F G+++ E+++GR +DI
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 41/215 (19%)
Query: 483 GFKEFNEL---GRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRH 539
G ++F+ L GRGSY K +LV R R A ++ + + +++ + +H
Sbjct: 3 GLQDFDLLRVIGRGSYA---KVLLV--RLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 57
Query: 540 -----SNIVNLLGY--CLEMGERLL-VYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAA 591
SN L+G C + RL V E++ G L H+ R S + +
Sbjct: 58 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEIS 116
Query: 592 KGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER--DLTTD-------- 641
L YLH+ II+RD+K N+LLDS+ ++ D+G+ R D T+
Sbjct: 117 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 173
Query: 642 ----MKSDVHNF-------GIVLLEILSGRKAYDI 665
++ + + F G+++ E+++GR +DI
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 208
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 486 EFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN-------IREFEMELEVLCNIR 538
E ELG G++G V K Q+ A I N E E V+ +
Sbjct: 31 EDKELGSGNFGTVKKGYY----QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 86
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ IV ++G C E +LV E G L+ +L + ++ +++ Q + G++YL
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLE 144
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD--------------------- 637
+ +HRD+ N+LL + A+I+DFGL + D
Sbjct: 145 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 638 ---LTTDMKSDVHNFGIVLLEILS-GRKAY 663
KSDV +FG+++ E S G+K Y
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 486 EFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN-------IREFEMELEVLCNIR 538
E ELG G++G V K Q+ A I N E E V+ +
Sbjct: 31 EDKELGSGNFGTVKKGYY----QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 86
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ IV ++G C E +LV E G L+ +L + ++ +++ Q + G++YL
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLE 144
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD--------------------- 637
+ +HRD+ N+LL + A+I+DFGL + D
Sbjct: 145 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 638 ---LTTDMKSDVHNFGIVLLEILS-GRKAY 663
KSDV +FG+++ E S G+K Y
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
N F +GRG +G VY D G+ A+K + I + ++ ++ +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 541 N---IVNLLGYCLEMGERL-LVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGL 594
+ + Y ++L + + M G LH HL HG S + + + GL
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF---YAAEIILGL 304
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVLL 654
E++H +++RD+K NILLD RI+D GL +C+ S V G +
Sbjct: 305 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGL--ACDFSKKKPHAS-VGTHGYMAP 358
Query: 655 EILSGRKAYD 664
E+L AYD
Sbjct: 359 EVLQKGVAYD 368
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
N F +GRG +G VY D G+ A+K + I + ++ ++ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 541 N---IVNLLGYCLEMGERL-LVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGL 594
+ + Y ++L + + M G LH HL HG S + + + GL
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF---YAAEIILGL 305
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVLL 654
E++H +++RD+K NILLD RI+D GL +C+ S V G +
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGL--ACDFSKKKPHAS-VGTHGYMAP 359
Query: 655 EILSGRKAYD 664
E+L AYD
Sbjct: 360 EVLQKGVAYD 369
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 486 EFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN-------IREFEMELEVLCNIR 538
E ELG G++G V K Q+ A I N E E V+ +
Sbjct: 15 EDKELGSGNFGTVKKGYY----QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 70
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ IV ++G C E +LV E G L+ +L + ++ +++ Q + G++YL
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLE 128
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD--------------------- 637
+ +HRD+ N+LL + A+I+DFGL + D
Sbjct: 129 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC 185
Query: 638 ---LTTDMKSDVHNFGIVLLEILS-GRKAY 663
KSDV +FG+++ E S G+K Y
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 486 EFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN-------IREFEMELEVLCNIR 538
E ELG G++G V K Q+ A I N E E V+ +
Sbjct: 15 EDKELGSGNFGTVKKGYY----QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 70
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ IV ++G C E +LV E G L+ +L + ++ +++ Q + G++YL
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLE 128
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD--------------------- 637
+ +HRD+ N+LL + A+I+DFGL + D
Sbjct: 129 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 638 ---LTTDMKSDVHNFGIVLLEILS-GRKAY 663
KSDV +FG+++ E S G+K Y
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 67
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHE 126
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 127 RMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIH--TNIREFEMELEVLCNIRHSNIVNLL 546
LG G+ G V AV V VAVK + + NI++ E+ + + H N+V
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFY 70
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G+ E + L E+ G L D + + + + Q G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIG---IT 126
Query: 607 HRDVKTLNILLDSDWGARIADFGLLT 632
HRD+K N+LLD +I+DFGL T
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 12 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 69
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 70 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHE 128
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 129 RMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 174
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 486 EFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN-------IREFEMELEVLCNIR 538
E ELG G++G V K Q+ A I N E E V+ +
Sbjct: 9 EDKELGSGNFGTVKKGYY----QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 64
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ IV ++G C E +LV E G L+ +L + ++ +++ Q + G++YL
Sbjct: 65 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLE 122
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD--------------------- 637
+ +HRD+ N+LL + A+I+DFGL + D
Sbjct: 123 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 638 ---LTTDMKSDVHNFGIVLLEILS-GRKAY 663
KSDV +FG+++ E S G+K Y
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 209
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 4 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 61
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 62 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHE 120
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 121 RMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 15 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 72
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 73 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHE 131
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 132 RMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 177
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Query: 530 ELEVLCNIR-HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISM 588
E+++L + H NI+ L LV++ M +G L D+L ++ R KI
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMR 118
Query: 589 QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
+ + LHK I+HRD+K NILLD D ++ DFG SC+ D
Sbjct: 119 ALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF--SCQLD 162
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 486 EFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN-------IREFEMELEVLCNIR 538
E ELG G++G V K Q+ A I N E E V+ +
Sbjct: 21 EDKELGSGNFGTVKKGYY----QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 76
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ IV ++G C E +LV E G L+ +L + ++ +++ Q + G++YL
Sbjct: 77 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLE 134
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD--------------------- 637
+ +HRD+ N+LL + A+I+DFGL + D
Sbjct: 135 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 638 ---LTTDMKSDVHNFGIVLLEILS-GRKAY 663
KSDV +FG+++ E S G+K Y
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 478 KDATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLC 535
K FK LG GS+ V A L R+ A+K II N + E +V+
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 536 NIRHSNIVNLLGYCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H V L + + E+L + G L ++ + + + + + L
Sbjct: 66 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSAL 123
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG 629
EYLH IIHRD+K NILL+ D +I DFG
Sbjct: 124 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFG 155
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I FGL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 48/222 (21%)
Query: 476 ELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLC 535
++K F+ LG+GS+G V+ A Q +A ++ M+ +V C
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-------MDDDVEC 64
Query: 536 NIRHSNIVNLL--------GYC-LEMGERLL-VYEFMPRGTLHDHLHGGLSPLNWSLRLK 585
+ +++L +C + E L V E++ G L H+ + S
Sbjct: 65 TMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS-CHKFDLSRATF 123
Query: 586 ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKS- 644
+ + GL++LH I++RD+K NILLD D +IADFG+ C+ ++ D K+
Sbjct: 124 YAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGM---CKENMLGDAKTN 177
Query: 645 -----------------------DVHNFGIVLLEILSGRKAY 663
D +FG++L E+L G+ +
Sbjct: 178 EFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 478 KDATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLC 535
K FK LG GS+ V A L R+ A+K II N + E +V+
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 536 NIRHSNIVNLLGYCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H V L + + E+L + G L ++ + + + + + L
Sbjct: 65 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSAL 122
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG 629
EYLH IIHRD+K NILL+ D +I DFG
Sbjct: 123 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFG 154
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 499 YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLV 558
Y+ L++ ++ K N I + +F+ EL+++ +I++ + G E ++
Sbjct: 62 YEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYII 121
Query: 559 YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAK--------GLEYLHKDAAPPIIHRDV 610
YE+M ++ L+ + I +Q K Y+H + I HRDV
Sbjct: 122 YEYMENDSIL-KFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDV 178
Query: 611 KTLNILLDSDWGARIADFG 629
K NIL+D + +++DFG
Sbjct: 179 KPSNILMDKNGRVKLSDFG 197
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 67
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHE 126
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 127 RMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 484 FKEFN---ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FK+ N +L G ++K G + VK R+F E L H
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 541 NIVNLLGYCLE--MGERLLVYEFMPRGTLHDHLHGGLS-PLNWSLRLKISMQAAKGLEYL 597
N++ +LG C L+ +MP G+L++ LH G + ++ S +K ++ A+G+ +L
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL 127
Query: 598 HKDAAPPIIHRD-VKTLNILLDSDWGARIA 626
H P+I R + + ++++D D ARI+
Sbjct: 128 H--TLEPLIPRHALNSRSVMIDEDMTARIS 155
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 473 RLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELE 532
R + +D + + + LG G++ V A +++ + A + E E+
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 533 VLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQA 590
VL I+H NIV L G L+ + + G L D + G + + S ++ Q
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQV 125
Query: 591 AKGLEYLHKDAAPPIIHRDVKTLNIL---LDSDWGARIADFGL 630
++YLH I+HRD+K N+L LD D I+DFGL
Sbjct: 126 LDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGL 165
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 490 LGRGSYGFVYKAVLVDGR-------QVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
LG G++G VY+ V G QVAVK + +F ME ++ H NI
Sbjct: 65 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNI 122
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLH------GGLSPLNWSLRLKISMQAAKGLEY 596
V +G L+ R ++ E M G L L S L L ++ A G +Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIA---DFGLLTSCER----------------- 636
L ++ IHRD+ N LL R+A DFG+ R
Sbjct: 183 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 239
Query: 637 ------DLTTDMKSDVHNFGIVLLEILS 658
+ K+D +FG++L EI S
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 486 EFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTN-------IREFEMELEVLCNIR 538
E ELG G++G V K Q+ A I N E E V+ +
Sbjct: 11 EDKELGSGNFGTVKKGYY----QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 66
Query: 539 HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLH 598
+ IV ++G C E +LV E G L+ +L + ++ +++ Q + G++YL
Sbjct: 67 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLE 124
Query: 599 KDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD--------------------- 637
+ +HRD+ N+LL + A+I+DFGL + D
Sbjct: 125 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 638 ---LTTDMKSDVHNFGIVLLEILS-GRKAY 663
KSDV +FG+++ E S G+K Y
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 211
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 11 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 68
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 69 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHE 127
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 128 RMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 67
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHE 126
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 127 RMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 154
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 155 HRDLKPENILLNEDMHIQITDFG 177
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 99
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 155
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 156 HRDLKPENILLNEDMHIQITDFG 178
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 101
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 157
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 158 HRDLKPENILLNEDMHIQITDFG 180
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Query: 530 ELEVLCNIR-HSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISM 588
E+++L + H NI+ L LV++ M +G L D+L ++ R KI
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMR 131
Query: 589 QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
+ + LHK I+HRD+K NILLD D ++ DFG SC+ D
Sbjct: 132 ALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF--SCQLD 175
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 67
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHE 126
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 127 RMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 99
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 155
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 156 HRDLKPENILLNEDMHIQITDFG 178
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 154
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 155 HRDLKPENILLNEDMHIQITDFG 177
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 478 KDATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLC 535
K FK LG GS+ V A L R+ A+K II N + E +V+
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 536 NIRHSNIVNLLGYCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H V L + + E+L + G L ++ + + + + + L
Sbjct: 63 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSAL 120
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG 629
EYLH IIHRD+K NILL+ D +I DFG
Sbjct: 121 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFG 152
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 478 KDATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLC 535
K FK LG GS+ V A L R+ A+K II N + E +V+
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 536 NIRHSNIVNLLGYCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGL 594
+ H V L + + E+L + G L ++ + + + + + L
Sbjct: 64 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSAL 121
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG 629
EYLH IIHRD+K NILL+ D +I DFG
Sbjct: 122 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFG 153
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 152
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 153 HRDLKPENILLNEDMHIQITDFG 175
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 154
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 155 HRDLKPENILLNEDMHIQITDFG 177
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I D GL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 473 RLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELE 532
R + +D + + + LG G++ V A +++ + A + E E+
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 533 VLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQA 590
VL I+H NIV L G L+ + + G L D + G + + S ++ Q
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQV 125
Query: 591 AKGLEYLHKDAAPPIIHRDVKTLNIL---LDSDWGARIADFGL 630
++YLH I+HRD+K N+L LD D I+DFGL
Sbjct: 126 LDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGL 165
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 152
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 153 HRDLKPENILLNEDMHIQITDFG 175
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 152
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 153 HRDLKPENILLNEDMHIQITDFG 175
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 24/166 (14%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL--- 546
LG+GS+G V+ A Q +A ++ M+ +V C + +++L
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-------MDDDVECTMVEKRVLSLAWEH 77
Query: 547 -----GYC-LEMGERLL-VYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
+C + E L V E++ G L H+ + S + + GL++LH
Sbjct: 78 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGLQFLHS 136
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSD 645
I++RD+K NILLD D +IADFG+ C+ ++ D K++
Sbjct: 137 KG---IVYRDLKLDNILLDKDGHIKIADFGM---CKENMLGDAKTN 176
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 472 FRLSELKDAT----NGFKEFNELGRGSYGFV---YKAVLVDGRQVAVKRANAATIIHTNI 524
F E+ D+T ++ +G G+ G V Y A+L R VA+K+ + T+
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHA 67
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCL------EMGERLLVYEFMPRGTLHDHLHGGLSPL 578
+ EL ++ + H NI+ LL E + +V E M L + L
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHE 126
Query: 579 NWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
S L Q G+++LH IIHRD+K NI++ SD +I DFGL
Sbjct: 127 RMSYLL---YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I D GL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 154
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 155 HRDLKPENILLNEDMHIQITDFG 177
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 154
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 155 HRDLKPENILLNEDMHIQITDFG 177
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVK--RANAATIIHTNIREFE----MELEVLCNIR-HSN 541
+GRG V + V G + AVK A + + E E +L + H +
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 542 IVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
I+ L+ LV++ M +G L D+L ++ L+ I + + +LH
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA-LSEKETRSIMRSLLEAVSFLH--- 217
Query: 602 APPIIHRDVKTLNILLDSDWGARIADFGL 630
A I+HRD+K NILLD + R++DFG
Sbjct: 218 ANNIVHRDLKPENILLDDNMQIRLSDFGF 246
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 18/190 (9%)
Query: 452 DAIADSLPHPASACPGMAQVFRLSELKDATNGFKEFNE----------LGRGSYGFVYKA 501
DA+ L PA F LS KD N ++ +GRG++G V
Sbjct: 30 DALVYDLDFPALRKNKNIDNF-LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLV 88
Query: 502 VLVDGRQV-AVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERL-LVY 559
R+V A+K + +I + F E + +S V L Y + L +V
Sbjct: 89 RHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 148
Query: 560 EFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS 619
E+MP G L + + P W+ R + + L+ +H + IHRDVK N+LLD
Sbjct: 149 EYMPGGDLVNLMSNYDVPEKWA-RF-YTAEVVLALDAIH---SMGFIHRDVKPDNMLLDK 203
Query: 620 DWGARIADFG 629
++ADFG
Sbjct: 204 SGHLKLADFG 213
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Query: 481 TNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRH 539
++ + ELG+G++ V + V G + A K N + + ++ E E + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYL 597
NIV L E LV++ + G L + + S + S ++ Q + + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---QILESIAYC 121
Query: 598 HKDAAPPIIHRDVKTLNILLDSD---WGARIADFGL 630
H + I+HR++K N+LL S ++ADFGL
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGL 154
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 473 RLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELE 532
R + +D + + + LG G++ V A +++ + A + E E+
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 533 VLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQA 590
VL I+H NIV L G L+ + + G L D + G + + S ++ Q
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQV 125
Query: 591 AKGLEYLHKDAAPPIIHRDVKTLNIL---LDSDWGARIADFGL 630
++YLH I+HRD+K N+L LD D I+DFGL
Sbjct: 126 LDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGL 165
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 18/190 (9%)
Query: 452 DAIADSLPHPASACPGMAQVFRLSELKDATNGFKEFNE----------LGRGSYGFVYKA 501
DA+ L PA F LS KD N ++ +GRG++G V
Sbjct: 35 DALVYDLDFPALRKNKNIDNF-LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLV 93
Query: 502 VLVDGRQV-AVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERL-LVY 559
R+V A+K + +I + F E + +S V L Y + L +V
Sbjct: 94 RHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 153
Query: 560 EFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS 619
E+MP G L + + P W+ R + + L+ +H + IHRDVK N+LLD
Sbjct: 154 EYMPGGDLVNLMSNYDVPEKWA-RF-YTAEVVLALDAIH---SMGFIHRDVKPDNMLLDK 208
Query: 620 DWGARIADFG 629
++ADFG
Sbjct: 209 SGHLKLADFG 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 488 NELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
ELG+G++ V + V G + A K N + + ++ E E + ++H NIV L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPP 604
E LV++ + G L + + S + S ++ Q + + Y H +
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---QILESIAYCHSNG--- 125
Query: 605 IIHRDVKTLNILLDSD---WGARIADFGL 630
I+HR++K N+LL S ++ADFGL
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGL 154
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 18/190 (9%)
Query: 452 DAIADSLPHPASACPGMAQVFRLSELKDATNGFKEFNE----------LGRGSYGFVYKA 501
DA+ L PA F LS KD N ++ +GRG++G V
Sbjct: 35 DALVYDLDFPALRKNKNIDNF-LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLV 93
Query: 502 VLVDGRQV-AVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERL-LVY 559
R+V A+K + +I + F E + +S V L Y + L +V
Sbjct: 94 RHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 153
Query: 560 EFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS 619
E+MP G L + + P W+ R + + L+ +H + IHRDVK N+LLD
Sbjct: 154 EYMPGGDLVNLMSNYDVPEKWA-RF-YTAEVVLALDAIH---SMGFIHRDVKPDNMLLDK 208
Query: 620 DWGARIADFG 629
++ADFG
Sbjct: 209 SGHLKLADFG 218
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 58/219 (26%)
Query: 484 FKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANA--ATIIHTNIREFEMELEVLCNIRHS 540
++ + +G G+YG V A G +VAVK+ + +IIH R + EL +L +++H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK-RTYR-ELRLLKHMKHE 81
Query: 541 NIVNLLGYCLEMGERLLVYEFMPRGTLHD--------HLHGGLSPLNWSLRLK------- 585
N++ LL F P +L + HL G + LN ++ +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHV 127
Query: 586 --ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLT---- 639
+ Q +GL+Y+H + IIHRD+K N+ ++ D +I D GL + ++T
Sbjct: 128 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVA 184
Query: 640 ---------------TDMKSDVHNFGIVLLEILSGRKAY 663
+ D+ + G ++ E+L+GR +
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 99 FTFQDDEKLYFGLSYAKNGCLLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 154
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 155 HRDLKPENILLNEDMHIQITDFG 177
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 80
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 81 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 136
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 137 HRDLKPENILLNEDMHIQITDFG 159
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Query: 481 TNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRH 539
++ + ELG+G++ V + V G + A K N + + ++ E E + ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYL 597
NIV L E LV++ + G L + + S + S ++ Q + + Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---QILESIAYC 120
Query: 598 HKDAAPPIIHRDVKTLNILLDSD---WGARIADFGL 630
H + I+HR++K N+LL S ++ADFGL
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGL 153
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 95
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 151
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 152 HRDLKPENILLNEDMHIQITDFG 174
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 41/208 (19%)
Query: 481 TNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNI-RH 539
T+G++ ++G GSY + + A A II + R+ E+E+L +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCI-----HKATNMEFAVKIIDKSKRDPTEEIEILLRYGQH 75
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLK--ISMQAAKGLEYL 597
NI+ L + +V E M G L D + L +S R + K +EYL
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKI---LRQKFFSEREASAVLFTITKTVEYL 132
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWG----ARIADFG-----------LLTSC-------- 634
H A ++HRD+K NIL + G RI DFG L+T C
Sbjct: 133 H---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAP 189
Query: 635 ---ERDLTTDMKSDVHNFGIVLLEILSG 659
ER D D+ + G++L +L+G
Sbjct: 190 EVLERQ-GYDAACDIWSLGVLLYTMLTG 216
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V A L R+ A+K II N + E +V+ + H V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 95
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 151
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 152 HRDLKPENILLNEDMHIQITDFG 174
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
Query: 476 ELKDATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVL 534
E ++ + LGRGS+G V++ G Q AVK+ + F +E V
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKK--------VRLEVFRVEELVA 117
Query: 535 C-NIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKG 593
C + IV L G E + E + G+L L + L L QA +G
Sbjct: 118 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEG 176
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIA--DFG 629
LEYLH I+H DVK N+LL SD G+R A DFG
Sbjct: 177 LEYLHTRR---ILHGDVKADNVLLSSD-GSRAALCDFG 210
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GSYG K DG+ + K + ++ + E+ +L ++H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 549 CLEMGERLL--VYEFMPRGTLHDHLHGGLSP---LNWSLRLKISMQAAKGLEYLHK--DA 601
++ L V E+ G L + G L+ L++ Q L+ H+ D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 602 APPIIHRDVKTLNILLDSDWGARIADFGL 630
++HRD+K N+ LD ++ DFGL
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GSYG K DG+ + K + ++ + E+ +L ++H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 549 CLEMGERLL--VYEFMPRGTLHDHLHGGLSP---LNWSLRLKISMQAAKGLEYLHK--DA 601
++ L V E+ G L + G L+ L++ Q L+ H+ D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 602 APPIIHRDVKTLNILLDSDWGARIADFGL 630
++HRD+K N+ LD ++ DFGL
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 528 EMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS 587
E E+E+L + H I+ + + + + +V E M G L D + G + +L
Sbjct: 202 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 259
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFG 629
Q ++YLH++ IIHRD+K N+LL S D +I DFG
Sbjct: 260 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 301
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 528 EMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS 587
E E+E+L + H I+ + + + + +V E M G L D + G + +L
Sbjct: 62 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 119
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFG 629
Q ++YLH++ IIHRD+K N+LL S D +I DFG
Sbjct: 120 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 161
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 528 EMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS 587
E E+E+L + H I+ + + + + +V E M G L D + G + +L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 120
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFG 629
Q ++YLH++ IIHRD+K N+LL S D +I DFG
Sbjct: 121 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 528 EMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS 587
E E+E+L + H I+ + + + + +V E M G L D + G + +L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 120
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFG 629
Q ++YLH++ IIHRD+K N+LL S D +I DFG
Sbjct: 121 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 528 EMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS 587
E E+E+L + H I+ + + + + +V E M G L D + G + +L
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 245
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFG 629
Q ++YLH++ IIHRD+K N+LL S D +I DFG
Sbjct: 246 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 287
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 528 EMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS 587
E E+E+L + H I+ + + + + +V E M G L D + G + +L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 120
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFG 629
Q ++YLH++ IIHRD+K N+LL S D +I DFG
Sbjct: 121 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Query: 478 KDATNGFKEFNELGRGSYGFVYKAVLV----DGRQVAVKRANAATIIH-TNIREFEMELE 532
K + F+ LG GS+G V+ L+ +GR A+K ++ + E
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVH---LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERL 58
Query: 533 VLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAK 592
+L + H I+ + G + + ++ +++ G L L N + + +
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCL 117
Query: 593 GLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LEYLH + II+RD+K NILLD + +I DFG
Sbjct: 118 ALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGF 152
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GSYG K DG+ + K + ++ + E+ +L ++H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 549 CLEMGERLL--VYEFMPRGTLHDHLHGGLSP---LNWSLRLKISMQAAKGLEYLHK--DA 601
++ L V E+ G L + G L+ L++ Q L+ H+ D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 602 APPIIHRDVKTLNILLDSDWGARIADFGL 630
++HRD+K N+ LD ++ DFGL
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
Query: 490 LGRGSYGF-VYKAVLVDGRQVAVKRANAATIIHTN-IREFEMELEVLCNIRHSNIVNLLG 547
LG GS+ V L R+ A+K II N + E +V+ + H V L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 548 YCLEMGERLLV-YEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + E+L + G L ++ + + + + + LEYLH II
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGKG---II 152
Query: 607 HRDVKTLNILLDSDWGARIADFG 629
HRD+K NILL+ D +I DFG
Sbjct: 153 HRDLKPENILLNEDMHIQITDFG 175
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 528 EMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS 587
E E+E+L + H I+ + + + + +V E M G L D + G + +L
Sbjct: 69 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 126
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS---DWGARIADFG 629
Q ++YLH++ IIHRD+K N+LL S D +I DFG
Sbjct: 127 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 168
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 15/187 (8%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIR-HSNIVNLLG 547
LG G+Y V AV L +G++ AVK H+ R F E+E L + + NI+ L+
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAG-HSRSRVFR-EVETLYQCQGNKNILELIE 78
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
+ + LV+E + G++ H+ N ++ A L++LH I H
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQKQ-KHFNEREASRVVRDVAAALDFLHTKG---IAH 134
Query: 608 RDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVLLEILSGRKAYDIEY 667
RD+K NIL +S + C+ DL + MK + I E+ + EY
Sbjct: 135 RDLKPENILCESP-----EKVSPVKICDFDLGSGMKLNNSCTPITTPELTT--PCGSAEY 187
Query: 668 VPPGIVE 674
+ P +VE
Sbjct: 188 MAPEVVE 194
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 31/201 (15%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A V +VA+K+ + T +RE +++L
Sbjct: 40 DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLRE----IQIL 95
Query: 535 CNIRHSNIVN----LLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLK----- 585
RH N++ L LE + + + D + L L S +L
Sbjct: 96 LRFRHENVIGIRDILRASTLEAMRDVYI--------VQDLMETDLYKLLKSQQLSNDHIC 147
Query: 586 -ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL--LTSCERDLTTDM 642
Q +GL+Y+H + ++HRD+K N+L+++ +I DFGL + E D T +
Sbjct: 148 YFLYQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFL 204
Query: 643 KSDVHNFGIVLLEILSGRKAY 663
V EI+ K Y
Sbjct: 205 TEXVATRWYRAPEIMLNSKGY 225
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 93/261 (35%), Gaps = 92/261 (35%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHG----------------------GLSPLNW 580
NLLG C + G L+V EF G L +L G P++
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 154
Query: 581 SLRLKI-------------------SMQAAKGLEYLHKD--------------------- 600
RL ++ + E L+KD
Sbjct: 155 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 214
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER-----------------------D 637
A+ IHRD+ NILL +I DFGL + D
Sbjct: 215 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 274
Query: 638 LTTDMKSDVHNFGIVLLEILS 658
++SDV +FG++L EI S
Sbjct: 275 RVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 93/261 (35%), Gaps = 92/261 (35%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHG----------------------GLSPLNW 580
NLLG C + G L+V EF G L +L G P++
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 156
Query: 581 SLRLKI-------------------SMQAAKGLEYLHKD--------------------- 600
RL ++ + E L+KD
Sbjct: 157 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 216
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER-----------------------D 637
A+ IHRD+ NILL +I DFGL + D
Sbjct: 217 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 276
Query: 638 LTTDMKSDVHNFGIVLLEILS 658
++SDV +FG++L EI S
Sbjct: 277 RVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 93/261 (35%), Gaps = 92/261 (35%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHG----------------------GLSPLNW 580
NLLG C + G L+V EF G L +L G P++
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 147
Query: 581 SLRLKI-------------------SMQAAKGLEYLHKD--------------------- 600
RL ++ + E L+KD
Sbjct: 148 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 207
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER-----------------------D 637
A+ IHRD+ NILL +I DFGL + D
Sbjct: 208 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 267
Query: 638 LTTDMKSDVHNFGIVLLEILS 658
++SDV +FG++L EI S
Sbjct: 268 RVYTIQSDVWSFGVLLWEIFS 288
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 25/173 (14%)
Query: 478 KDATNGFKEFNELGRGSYGFV-----------YKAVLVDGRQVAVKRANAATIIHTNIRE 526
+D + ++ ELG G + V Y A + R+++ R + E
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSR------EE 61
Query: 527 FEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKI 586
E E+ +L IRH NI+ L + +L+ E + G L D L S L +
Sbjct: 62 IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQF 120
Query: 587 SMQAAKGLEYLHKDAAPPIIHRDVKTLNI-LLDSDW---GARIADFGLLTSCE 635
Q G+ YLH + I H D+K NI LLD + ++ DFG+ E
Sbjct: 121 LKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 170
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 93/261 (35%), Gaps = 92/261 (35%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATII-----HTNIREFEMELEVLCNI-RHSNIV 543
LGRG++G V +A + A R A ++ H+ R EL++L +I H N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 544 NLLGYCLEMGERLLV-YEFMPRGTLHDHLHG----------------------GLSPLNW 580
NLLG C + G L+V EF G L +L G P++
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 149
Query: 581 SLRLKI-------------------SMQAAKGLEYLHKD--------------------- 600
RL ++ + E L+KD
Sbjct: 150 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 209
Query: 601 AAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCER-----------------------D 637
A+ IHRD+ NILL +I DFGL + D
Sbjct: 210 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 269
Query: 638 LTTDMKSDVHNFGIVLLEILS 658
++SDV +FG++L EI S
Sbjct: 270 RVYTIQSDVWSFGVLLWEIFS 290
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A V+ +VA+K+ + T +RE +++L
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 95
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGG-LSPLNWSLRLK------IS 587
RH NI+ + R E M L HL G L L + L
Sbjct: 96 LRFRHENIIGINDII-----RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL 150
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 151 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 197
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
Query: 476 ELKDATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVL 534
E ++ + +GRGS+G V++ G Q AVK+ + F +E V
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKK--------VRLEVFRVEELVA 103
Query: 535 C-NIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKG 593
C + IV L G E + E + G+L L + L L QA +G
Sbjct: 104 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEG 162
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIA--DFG 629
LEYLH I+H DVK N+LL SD G+R A DFG
Sbjct: 163 LEYLHTRR---ILHGDVKADNVLLSSD-GSRAALCDFG 196
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 527 FEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRL 584
E E+ VL I+H NIV L LV + + G L D + G + + SL +
Sbjct: 53 LENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVI 112
Query: 585 KISMQAAKGLEYLHKDAAPPIIHRDVKTLNILL---DSDWGARIADFGL 630
+ + A K YLH++ I+HRD+K N+L + + I DFGL
Sbjct: 113 QQVLSAVK---YLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGL 155
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
Query: 476 ELKDATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVL 534
E ++ + +GRGS+G V++ G Q AVK+ + F +E V
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKK--------VRLEVFRVEELVA 119
Query: 535 C-NIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKG 593
C + IV L G E + E + G+L L + L L QA +G
Sbjct: 120 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEG 178
Query: 594 LEYLHKDAAPPIIHRDVKTLNILLDSDWGARIA--DFG 629
LEYLH I+H DVK N+LL SD G+R A DFG
Sbjct: 179 LEYLHTRR---ILHGDVKADNVLLSSD-GSRAALCDFG 212
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 490 LGRGSYGFVYKAVLVDGRQ-----VAVKRANAATIIHTNIREFEM-ELEVLCNIRHSNIV 543
LG+GS+G V++ R+ AVK +I + E M E VL +
Sbjct: 349 LGKGSFG----KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 404
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAA 602
L C + +RL V E++ G L H+ + + + + A GL +L
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIAIGLFFLQSKG- 462
Query: 603 PPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDL-----------TTDMKS------- 644
II+RD+K N++LDS+ +IADFG+ C+ ++ T D +
Sbjct: 463 --IIYRDLKLDNVMLDSEGHIKIADFGM---CKENIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 645 ------DVHNFGIVLLEILSGRKAYDIEYVPPGIVEWALPLIKQGKAAAIIDRNVALPRN 698
D FG++L E+L+G+ ++ G E L +I++ NVA P++
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFE------GEDEDEL-------FQSIMEHNVAYPKS 564
Query: 699 V 699
+
Sbjct: 565 M 565
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 80/187 (42%), Gaps = 22/187 (11%)
Query: 466 PGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGR-QVAVKRANAATII---- 520
PGM R E K + FK +LG G+YG V +G + A+K +
Sbjct: 23 PGM--YVRKKEGKIGESYFK-VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRY 79
Query: 521 ---HTNIREFEMEL----EVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHG 573
+ NI +F E+ +L ++ H NI+ L + LV EF G L + +
Sbjct: 80 SDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN 139
Query: 574 GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSD---WGARIADFGL 630
+ I Q G+ YLHK I+HRD+K NILL++ +I DFGL
Sbjct: 140 R-HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGL 195
Query: 631 LTSCERD 637
+ +D
Sbjct: 196 SSFFSKD 202
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 480 ATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRAN----AATIIHTNIREFEMELEVL 534
+ + ++ +LG G+YG VYKA+ V VA+KR + T IR E+ +L
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR----EVSLL 87
Query: 535 CNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISM--QAAK 592
++H NI+ L L++E+ L ++ + S+R+ S Q
Sbjct: 88 KELQHRNIIELKSVIHHNHRLHLIFEYA-ENDLKKYMDKN---PDVSMRVIKSFLYQLIN 143
Query: 593 GLEYLHKDAAPPIIHRDVKTLNILLD-SDWGA----RIADFGL 630
G+ + H +HRD+K N+LL SD +I DFGL
Sbjct: 144 GVNFCHSRRC---LHRDLKPQNLLLSVSDASETPVLKIGDFGL 183
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 487 FNE-LGRGSYGFVYKAVL--------VDGRQVAVKRANAATIIHTNIRE-FEMELEVLCN 536
FNE LG+G++ ++K V + +V +K + A H N E F ++
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSK 68
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H ++V G C+ E +LV EF+ G+L +L + +N +L+++ Q A + +
Sbjct: 69 LSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHF 128
Query: 597 LHKDAAPPIIHRDVKTLNILL 617
L ++ +IH +V NILL
Sbjct: 129 LEENT---LIHGNVCAKNILL 146
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 564 RGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGA 623
R +L D HG + L I +Q A+ +E+LH ++HRD+K NI D
Sbjct: 155 RCSLEDREHG--------VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVV 203
Query: 624 RIADFGLLTSCERD 637
++ DFGL+T+ ++D
Sbjct: 204 KVGDFGLVTAMDQD 217
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ +G GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+V L + +V E+MP G + HL G S + + Q EYL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 157
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+L+D ++ADFG
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIKVADFGF 187
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ +G GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+V L + +V E+MP G + HL G S + + Q EYL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 157
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+L+D ++ADFG
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIKVADFGF 187
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 66/162 (40%), Gaps = 25/162 (15%)
Query: 489 ELGRGSYGFV-----------YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNI 537
ELG G + V Y A + R+++ R + E E E+ +L I
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSR------EEIEREVNILREI 65
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L + +L+ E + G L D L S L + Q G+ YL
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYL 124
Query: 598 HKDAAPPIIHRDVKTLNI-LLDSDW---GARIADFGLLTSCE 635
H + I H D+K NI LLD + ++ DFG+ E
Sbjct: 125 H---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 30/171 (17%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTN---IREFEMELEVL 534
D + + + LG G G V+ AV D ++VA+K+ I+ T+ ++ E++++
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKK-----IVLTDPQSVKHALREIKII 62
Query: 535 CNIRHSNIVNL--------------LGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNW 580
+ H NIV + +G E+ +V E+M L + L G PL
Sbjct: 63 RRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQG--PLLE 119
Query: 581 SLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDS-DWGARIADFGL 630
Q +GL+Y+H + ++HRD+K N+ +++ D +I DFGL
Sbjct: 120 EHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGL 167
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 25/153 (16%)
Query: 490 LGRGSYGFV----------YKAVLVDGRQVAVKRANAATII-HTNIREFEMELEVLCNIR 538
+G+GS+G V + AV V ++ +K+ I+ N+ +L N++
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV--------LLKNVK 97
Query: 539 HSNIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
H +V L + + ++L V +++ G L HL L R + + A L YL
Sbjct: 98 HPFLVGL-HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYL 155
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H I++RD+K NILLDS + DFGL
Sbjct: 156 HSLN---IVYRDLKPENILLDSQGHIVLTDFGL 185
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
+LGRG +G V++ V ++ + A + T+ + E+ +L RH NI++L
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYM--AKFVKVKGTDQVLVKKEISILNIARHRNILHLHE 68
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIH 607
M E ++++EF+ + + ++ LN + Q + L++LH + I H
Sbjct: 69 SFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGH 125
Query: 608 RDVKTLNILLDSDWGA--RIADFG 629
D++ NI+ + + +I +FG
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFG 149
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 490 LGRGSYGFVYKAVLVDGRQ-----VAVKRANAATIIHTNIREFEM-ELEVLCNIRHSNIV 543
LG+GS+G V++ R+ AVK +I + E M E VL +
Sbjct: 28 LGKGSFG----KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 83
Query: 544 NLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAA 602
L C + +RL V E++ G L H+ + + + + A GL +L
Sbjct: 84 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIAIGLFFLQSKG- 141
Query: 603 PPIIHRDVKTLNILLDSDWGARIADFGL 630
II+RD+K N++LDS+ +IADFG+
Sbjct: 142 --IIYRDLKLDNVMLDSEGHIKIADFGM 167
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 487 FNE-LGRGSYGFVYKAVL--------VDGRQVAVKRANAATIIHTNIRE-FEMELEVLCN 536
FNE LG+G++ ++K V + +V +K + A H N E F ++
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSK 68
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ H ++V G C E +LV EF+ G+L +L + +N +L+++ Q A + +
Sbjct: 69 LSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHF 128
Query: 597 LHKDAAPPIIHRDVKTLNILL 617
L ++ +IH +V NILL
Sbjct: 129 LEENT---LIHGNVCAKNILL 146
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 481 TNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNI-RH 539
T+G++ ++G GSY + + A A II + R+ E+E+L +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCI-----HKATNXEFAVKIIDKSKRDPTEEIEILLRYGQH 75
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLK--ISMQAAKGLEYL 597
NI+ L + +V E G L D + L +S R + K +EYL
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKI---LRQKFFSEREASAVLFTITKTVEYL 132
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWG----ARIADFGL 630
H A ++HRD+K NIL + G RI DFG
Sbjct: 133 H---AQGVVHRDLKPSNILYVDESGNPESIRICDFGF 166
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 25/162 (15%)
Query: 489 ELGRGSYGFV-----------YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNI 537
ELG G + V Y A + R++ R + E E E+ +L I
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSR------EEIEREVNILREI 86
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
RH NI+ L + +L+ E + G L D L S L + Q G+ YL
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYL 145
Query: 598 HKDAAPPIIHRDVKTLNI-LLDSDW---GARIADFGLLTSCE 635
H + I H D+K NI LLD + ++ DFG+ E
Sbjct: 146 H---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 184
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 488 NELGRGSYGFV-YKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
+LG G + +V L DG A+KR + E ++ L N H NI+ L+
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFN--HPNILRLV 92
Query: 547 GYCL-EMG---ERLLVYEFMPRGTLHDHLHGGLSPLNWSLR---LKISMQAAKGLEYLHK 599
YCL E G E L+ F RGTL + + N+ L + + +GLE +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH- 151
Query: 600 DAAPPIIHRDVKTLNILLD-----------------------------SDWGARIADFGL 630
A HRD+K NILL DW A+
Sbjct: 152 --AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 631 ----LTSCERDLTTDMKSDVHNFGIVLLEILSGRKAYDIEY 667
L S + D ++DV + G VL ++ G YD+ +
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF 250
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 485 KEFNELGR----GSYGFVYKAVLV--DGRQVAVKRANAATIIHTNIRE-FEMELEVLCNI 537
+E ELGR G +G V++ + + + +AV ++RE F E +
Sbjct: 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 73
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
H +IV L+G E ++ E G L L L+ + + + Q + L YL
Sbjct: 74 DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 132
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+HRD+ N+L+ S+ ++ DFGL
Sbjct: 133 ESKR---FVHRDIAARNVLVSSNDCVKLGDFGL 162
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 484 FKEFN---ELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
FK+ N +L G ++K G + VK R+F E L H
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 541 NIVNLLGYCLE--MGERLLVYEFMPRGTLHDHLHGGLS-PLNWSLRLKISMQAAKGLEYL 597
N++ +LG C L+ + P G+L++ LH G + ++ S +K ++ A+G +L
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFL 127
Query: 598 HKDAAPPIIHRD-VKTLNILLDSDWGARIA 626
H P+I R + + ++ +D D ARI+
Sbjct: 128 H--TLEPLIPRHALNSRSVXIDEDXTARIS 155
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 485 KEFNELGR----GSYGFVYKAVLV--DGRQVAVKRANAATIIHTNIRE-FEMELEVLCNI 537
+E ELGR G +G V++ + + + +AV ++RE F E +
Sbjct: 37 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 96
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
H +IV L+G E ++ E G L L L+ + + + Q + L YL
Sbjct: 97 DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 155
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+HRD+ N+L+ S+ ++ DFGL
Sbjct: 156 ESKR---FVHRDIAARNVLVSSNDCVKLGDFGL 185
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 485 KEFNELGR----GSYGFVYKAVLV--DGRQVAVKRANAATIIHTNIRE-FEMELEVLCNI 537
+E ELGR G +G V++ + + + +AV ++RE F E +
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
H +IV L+G E ++ E G L L L+ + + + Q + L YL
Sbjct: 69 DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 127
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+HRD+ N+L+ S+ ++ DFGL
Sbjct: 128 ESKR---FVHRDIAARNVLVSSNDCVKLGDFGL 157
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 485 KEFNELGR----GSYGFVYKAVLV--DGRQVAVKRANAATIIHTNIRE-FEMELEVLCNI 537
+E ELGR G +G V++ + + + +AV ++RE F E +
Sbjct: 12 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 71
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
H +IV L+G E ++ E G L L L+ + + + Q + L YL
Sbjct: 72 DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 130
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+HRD+ N+L+ S+ ++ DFGL
Sbjct: 131 ESKR---FVHRDIAARNVLVSSNDCVKLGDFGL 160
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 485 KEFNELGR----GSYGFVYKAVLV--DGRQVAVKRANAATIIHTNIRE-FEMELEVLCNI 537
+E ELGR G +G V++ + + + +AV ++RE F E +
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
H +IV L+G E ++ E G L L L+ + + + Q + L YL
Sbjct: 69 DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 127
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+HRD+ N+L+ S+ ++ DFGL
Sbjct: 128 ESKR---FVHRDIAARNVLVSSNDCVKLGDFGL 157
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 485 KEFNELGR----GSYGFVYKAVLV--DGRQVAVKRANAATIIHTNIRE-FEMELEVLCNI 537
+E ELGR G +G V++ + + + +AV ++RE F E +
Sbjct: 11 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 70
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
H +IV L+G E ++ E G L L L+ + + + Q + L YL
Sbjct: 71 DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 129
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+HRD+ N+L+ S+ ++ DFGL
Sbjct: 130 ESKR---FVHRDIAARNVLVSSNDCVKLGDFGL 159
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 485 KEFNELGR----GSYGFVYKAVLV--DGRQVAVKRANAATIIHTNIRE-FEMELEVLCNI 537
+E ELGR G +G V++ + + + +AV ++RE F E +
Sbjct: 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 65
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
H +IV L+G E ++ E G L L L+ + + + Q + L YL
Sbjct: 66 DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 124
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+HRD+ N+L+ S+ ++ DFGL
Sbjct: 125 ESKR---FVHRDIAARNVLVSSNDCVKLGDFGL 154
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 485 KEFNELGR----GSYGFVYKAVLV--DGRQVAVKRANAATIIHTNIRE-FEMELEVLCNI 537
+E ELGR G +G V++ + + + +AV ++RE F E +
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
H +IV L+G E ++ E G L L L+ + + + Q + L YL
Sbjct: 69 DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 127
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+HRD+ N+L+ S+ ++ DFGL
Sbjct: 128 ESKR---FVHRDIAARNVLVSSNDCVKLGDFGL 157
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 31/178 (17%)
Query: 481 TNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNI-- 537
T F E ++G G +G V+K V +DG A+KR+ + ++ E EV +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP--LAGSVDEQNALREVYAHAVL 67
Query: 538 -RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS---MQAAKG 593
+HS++V E L+ E+ G+L D + +++ ++ +Q +G
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 594 LEYLHKDAAPPIIHRDVKTLNILL--------------DSDWGA-----RIADFGLLT 632
L Y+H + ++H D+K NI + + DW + +I D G +T
Sbjct: 128 LRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 182
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 31/178 (17%)
Query: 481 TNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNI-- 537
T F E ++G G +G V+K V +DG A+KR+ + ++ E EV +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP--LAGSVDEQNALREVYAHAVL 65
Query: 538 -RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS---MQAAKG 593
+HS++V E L+ E+ G+L D + +++ ++ +Q +G
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 594 LEYLHKDAAPPIIHRDVKTLNILL--------------DSDWGA-----RIADFGLLT 632
L Y+H + ++H D+K NI + + DW + +I D G +T
Sbjct: 126 LRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 180
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A V+ +VA+K+ + T +RE +++L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 75
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 130
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 177
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 31/178 (17%)
Query: 481 TNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNI-- 537
T F E ++G G +G V+K V +DG A+KR+ + ++ E EV +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP--LAGSVDEQNALREVYAHAVL 65
Query: 538 -RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS---MQAAKG 593
+HS++V E L+ E+ G+L D + +++ ++ +Q +G
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 594 LEYLHKDAAPPIIHRDVKTLNILL--------------DSDWGA-----RIADFGLLT 632
L Y+H + ++H D+K NI + + DW + +I D G +T
Sbjct: 126 LRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 180
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 81/207 (39%), Gaps = 39/207 (18%)
Query: 481 TNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNI-RH 539
++G+ +G GSY + V A A +I + R+ E+E+L +H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCV-----HKATNMEYAVKVIDKSKRDPSEEIEILLRYGQH 80
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGLEYL 597
NI+ L + LV E M G L D + S S L K +EYL
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT---IGKTVEYL 137
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWG----ARIADFG-----------LLTSCE------- 635
H ++HRD+K NIL + G RI DFG L+T C
Sbjct: 138 HSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAP 194
Query: 636 ---RDLTTDMKSDVHNFGIVLLEILSG 659
+ D D+ + GI+L +L+G
Sbjct: 195 EVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 83/207 (40%), Gaps = 39/207 (18%)
Query: 481 TNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNI-RH 539
++G+ +G GSY + V A A +I + R+ E+E+L +H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCV-----HKATNMEYAVKVIDKSKRDPSEEIEILLRYGQH 80
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLK--ISMQAAKGLEYL 597
NI+ L + LV E M G L D + L +S R + K +EYL
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKI---LRQKFFSEREASFVLHTIGKTVEYL 137
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWG----ARIADFG-----------LLTSCE------- 635
H ++HRD+K NIL + G RI DFG L+T C
Sbjct: 138 HSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAP 194
Query: 636 ---RDLTTDMKSDVHNFGIVLLEILSG 659
+ D D+ + GI+L +L+G
Sbjct: 195 EVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A V+ +VA+K+ + T +RE +++L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 75
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 130
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPD 177
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
N +GRGS+G V K + G ++ ++ F+ E+E++ ++ H NI+ L
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 548 YCLEMGERLLVYEFMPRGTLHDH-LHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + LV E G L + +H + S +I + Y HK +
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSAVAYCHKLN---VA 128
Query: 607 HRDVKTLNILL--DS-DWGARIADFGL 630
HRD+K N L DS D ++ DFGL
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGL 155
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 31/178 (17%)
Query: 481 TNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNI-- 537
T F E ++G G +G V+K V +DG A+KR+ + ++ E EV +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP--LAGSVDEQNALREVYAHAVL 63
Query: 538 -RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKIS---MQAAKG 593
+HS++V E L+ E+ G+L D + +++ ++ +Q +G
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 594 LEYLHKDAAPPIIHRDVKTLNILL--------------DSDWGA-----RIADFGLLT 632
L Y+H + ++H D+K NI + + DW + +I D G +T
Sbjct: 124 LRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 178
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLG 547
N +GRGS+G V K + G ++ ++ F+ E+E++ ++ H NI+ L
Sbjct: 32 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 548 YCLEMGERLLVYEFMPRGTLHDH-LHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
+ + LV E G L + +H + S +I + Y HK +
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSAVAYCHKLN---VA 145
Query: 607 HRDVKTLNILL--DS-DWGARIADFGL 630
HRD+K N L DS D ++ DFGL
Sbjct: 146 HRDLKPENFLFLTDSPDSPLKLIDFGL 172
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ +G GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+V L + +V E++P G + HL G S + + Q EYL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 157
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+L+D ++ADFG
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIKVADFGF 187
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A V+ +VA+K+ + T +RE +++L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 75
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 130
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 177
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A V+ +VA+K+ + T +RE +++L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 75
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 130
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 177
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A V+ +VA+K+ + T +RE +++L
Sbjct: 28 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 83
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 84 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 138
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 139 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 185
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A V+ +VA+K+ + T +RE +++L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 75
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 130
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 177
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A V+ +VA+K+ + T +RE +++L
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 77
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 78 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 132
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 133 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 179
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A V+ +VA+K+ + T +RE +++L
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 95
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 150
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 151 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 197
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A V+ +VA+K+ + T +RE +++L
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 77
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 132
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 133 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPD 179
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A ++ +VA+K+ + T +RE +++L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLRE----IKIL 79
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 134
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 181
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM---ELEVLCNI 537
+ F+ LG GS+G V ++ G A+K + ++ ++E E E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV--KLKEIEHTLNEKRILQAV 98
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLE 595
+V L + +V E+ P G + HL G S + + Q E
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFE 155
Query: 596 YLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
YLH + +I+RD+K N+++D ++ DFGL
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGL 187
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A V+ +VA+K+ + T +RE +++L
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 77
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 132
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 133 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 179
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLC-NIRHSNIVNLLG 547
LGRGS+G V++ G Q AVK+ + F E + C + IV L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKK--------VRLEVFRAEELMACAGLTSPRIVPLYG 152
Query: 548 YCLEMGERLLVYEFMPRGTLHDHL-HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
E + E + G+L + G P + +L QA +GLEYLH I+
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRAL--YYLGQALEGLEYLHSRR---IL 207
Query: 607 HRDVKTLNILLDSDWG-ARIADFG 629
H DVK N+LL SD A + DFG
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFG 231
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A ++ +VA+K+ + T +RE +++L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 79
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFL----- 134
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A ++ +VA+K+ + T +RE +++L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 79
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 134
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 181
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 528 EMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLK 585
E E+ VL I+H NIV L LV + + G L D + G + + S ++
Sbjct: 68 ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR 127
Query: 586 ISMQAAKGLEYLHKDAAPPIIHRDVKTLNILL---DSDWGARIADFGL 630
Q + YLH+ I+HRD+K N+L D + I+DFGL
Sbjct: 128 ---QVLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGL 169
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F+ LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++P G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHT---NIREFEMELEVLCNIRHSNIVNL 545
+G+G++ V + + + G+Q AVK + A + + + + E + ++H +IV L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 546 LGYCLEMGERLLVYEFMPRGTL-HDHLHGGLSPLNWSLRL--KISMQAAKGLEYLHKDAA 602
L G +V+EFM L + + + +S + Q + L Y H +
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN- 150
Query: 603 PPIIHRDVKTLNILLDSDWGA---RIADFGL 630
IIHRDVK N+LL S + ++ DFG+
Sbjct: 151 --IIHRDVKPENVLLASKENSAPVKLGDFGV 179
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 490 LGRGSYGFVYKAVLV--DGRQVAVKRANAATIIHTNIRE-FEMELEVLCNIRHSNIVNLL 546
+G G +G V++ + + + +AV ++RE F E + H +IV L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 547 GYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
G E ++ E G L L L+ + + + Q + L YL + +
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 607 HRDVKTLNILLDSDWGARIADFGL 630
HRD+ N+L+ S+ ++ DFGL
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGL 537
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 26/106 (24%)
Query: 576 SPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCE 635
P+ + S Q A+G+E+L ++ IHRD+ NILL + +I DFGL
Sbjct: 194 EPITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 636 R-----------------------DLTTDMKSDVHNFGIVLLEILS 658
+ D KSDV ++G++L EI S
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 36/162 (22%)
Query: 448 ELDTDAIADSLPHPASACPGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGR 507
E+ D + LP+ AS + +L + LGRG++G V +A +
Sbjct: 5 EVPLDEQCERLPYDASKWEFARERLKLGK------------SLGRGAFGKVVQASAFGIK 52
Query: 508 QVAVKRANAATIIH-----TNIREFEMELEVLCNI-RHSNIVNLLGYCLEMGERLLV-YE 560
+ R A ++ + + EL++L +I H N+VNLLG C + G L+V E
Sbjct: 53 KSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVE 112
Query: 561 FMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAA 602
+ G L ++L ++ + L +L+KDAA
Sbjct: 113 YCKYGNLSNYL-----------------KSKRDLFFLNKDAA 137
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM---ELEVLCNI 537
+ F+ LG GS+G V ++ G A+K + ++ ++E E E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV--KLKEIEHTLNEKRILQAV 98
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLE 595
+V L + +V E+ P G + HL G S + + Q E
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFE 155
Query: 596 YLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
YLH + +I+RD+K N+++D ++ DFGL
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGL 187
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLC-NIRHSNIVNLLG 547
LGRGS+G V++ G Q AVK+ + F E + C + IV L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKK--------VRLEVFRAEELMACAGLTSPRIVPLYG 133
Query: 548 YCLEMGERLLVYEFMPRGTLHDHL-HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPII 606
E + E + G+L + G P + +L QA +GLEYLH I+
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRAL--YYLGQALEGLEYLHSRR---IL 188
Query: 607 HRDVKTLNILLDSDWG-ARIADFG 629
H DVK N+LL SD A + DFG
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFG 212
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+V L + +V E++P G + HL G S + + Q EYL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 157
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+L+D ++ DFG
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F+ LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++P G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F+ LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 34 DQFERIKTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++P G + HL G S + + Q
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 147
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 148 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 180
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+V L + +V E++P G + HL G S + + Q EYL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 158
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+L+D ++ DFG
Sbjct: 159 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F+ LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++P G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+V L + +V E++P G + HL G S + + Q EYL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 158
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+L+D ++ DFG
Sbjct: 159 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+V L + +V E++P G + HL G S + + Q EYL
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 143
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+L+D ++ DFG
Sbjct: 144 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 173
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 29/153 (18%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEM-----------ELEVLCNIR 538
+GRG++G V Q+ +A+ + +FEM E +++
Sbjct: 83 IGRGAFGEV---------QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 539 HSNIVNLLGYCLEMGERLL--VYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+V L +C ++ L V E+MP G L + + P W+ + + L+
Sbjct: 134 SPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFY--TAEVVLALDA 189
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFG 629
+H + +IHRDVK N+LLD ++ADFG
Sbjct: 190 IH---SMGLIHRDVKPDNMLLDKHGHLKLADFG 219
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+V L + +V E++P G + HL G S + + Q EYL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 157
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+L+D ++ DFG
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+V L + +V E++P G + HL G S + + Q EYL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 157
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+L+D ++ DFG
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F+ LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 42 DQFERIKTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++P G + HL G S + + Q
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 155
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F+ LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 42 DQFERIKTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++P G + HL G S + + Q
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 155
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A ++ +VA+K+ + T +RE +++L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 79
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 134
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A ++ +VA+K+ + T +RE +++L
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 80
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 135
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 136 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 182
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F+ LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 42 DQFERIKTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++P G + HL G S + + Q
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 155
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A ++ +VA+K+ + T +RE +++L
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 73
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 128
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 129 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 175
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A ++ +VA+K+ + T +RE +++L
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 80
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 135
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 136 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 182
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A ++ +VA+K+ + T +RE +++L
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 73
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 128
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 129 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 175
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A ++ +VA+K+ + T +RE +++L
Sbjct: 26 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 81
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 82 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 136
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 137 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 183
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A ++ +VA+K+ + T +RE +++L
Sbjct: 17 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 72
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 73 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 127
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 128 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 174
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A ++ +VA+K+ + T +RE +++L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE----IKIL 79
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 134
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F+ LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 62 DQFERIKTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++P G + HL G S + + Q
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 175
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 176 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 24/207 (11%)
Query: 466 PGMAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQ----VAVKRANAATIIH 521
P +A L + D ++ ++ ++G G++G A L+ +Q VAVK I
Sbjct: 4 PAVAGPMDLPIMHD-SDRYELVKDIGAGNFGV---ARLMRDKQANELVAVKYIERGEKID 59
Query: 522 TNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLN 579
N++ E+ ++RH NIV L +V E+ G L + + G S
Sbjct: 60 ENVKR---EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
Query: 580 WSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGAR--IADFGLLTSCERD 637
+ Q G+ Y H A + HRD+K N LLD R IADFG S
Sbjct: 117 ARFFFQ---QLISGVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGY--SKASV 168
Query: 638 LTTDMKSDVHNFGIVLLEILSGRKAYD 664
L + KS V + E+L +K YD
Sbjct: 169 LHSQPKSAVGTPAYIAPEVLL-KKEYD 194
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 19/160 (11%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIH---TNIREFEMELEVLCNIRHSNIVNL 545
LG+G+ V++ G A+K N + + +REFE VL + H NIV L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE----VLKKLNHKNIVKL 72
Query: 546 LGYCLEMGER--LLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
E R +L+ EF P G+L+ L L S L + G+ +L ++
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 602 APPIIHRDVKTLNILL----DSDWGARIADFGLLTSCERD 637
I+HR++K NI+ D ++ DFG E D
Sbjct: 133 ---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 33 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 86
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 87 DVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 142
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 143 NIMLLDRNVPKPRIKIIDFGL 163
>pdb|3QHY|B Chain B, Structural, Thermodynamic And Kinetic Analysis Of The
Picomolar Binding Affinity Interaction Of The
Beta-Lactamase Inhibitor Protein- Ii (Blip-Ii) With
Class A Beta-Lactamases
pdb|3QI0|A Chain A, Structural, Thermodynamic And Kinetic Analysis Of The
Picomolar Binding Affinity Interaction Of The
Beta-Lactamase Inhibitor Protein- Ii (Blip-Ii) With
Class A Beta-Lactamases
pdb|3QI0|B Chain B, Structural, Thermodynamic And Kinetic Analysis Of The
Picomolar Binding Affinity Interaction Of The
Beta-Lactamase Inhibitor Protein- Ii (Blip-Ii) With
Class A Beta-Lactamases
pdb|3QI0|C Chain C, Structural, Thermodynamic And Kinetic Analysis Of The
Picomolar Binding Affinity Interaction Of The
Beta-Lactamase Inhibitor Protein- Ii (Blip-Ii) With
Class A Beta-Lactamases
pdb|3QI0|D Chain D, Structural, Thermodynamic And Kinetic Analysis Of The
Picomolar Binding Affinity Interaction Of The
Beta-Lactamase Inhibitor Protein- Ii (Blip-Ii) With
Class A Beta-Lactamases
pdb|3QI0|E Chain E, Structural, Thermodynamic And Kinetic Analysis Of The
Picomolar Binding Affinity Interaction Of The
Beta-Lactamase Inhibitor Protein- Ii (Blip-Ii) With
Class A Beta-Lactamases
pdb|3QI0|F Chain F, Structural, Thermodynamic And Kinetic Analysis Of The
Picomolar Binding Affinity Interaction Of The
Beta-Lactamase Inhibitor Protein- Ii (Blip-Ii) With
Class A Beta-Lactamases
Length = 282
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 157 DVISGDGFSCGGVRDGGIVCWGPDSESLGVFNVTESFKVLASGKSSLCGISELSGEVKCW 216
D I+ ++ ++DG ++ WG DS+ V A ++ +G V W
Sbjct: 105 DAIAAGAWASYALKDGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVKNGGVIAW 164
Query: 217 GNNDF--VSVPPVGIRFV-SLAAGANHFCGIREDNHGVECWGSFNY--SSVPKN--SGFM 269
G+N F +VP V +A G H +++ V WG Y ++VP SG
Sbjct: 165 GDNYFGQTTVPAEAQSGVDDVAGGIFHSLALKDGK--VIAWGDNRYKQTTVPTEALSGVS 222
Query: 270 AIASSDFTTCGIRENDLVLDCWFANVSSPT 299
AIAS ++ + ++ ++ W ++ ++P+
Sbjct: 223 AIASGEWYSLALKNGKVI--AWGSSRTAPS 250
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 87
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 88 DVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 143
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGL 164
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 87
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 88 DVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 143
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGL 164
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 87
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 88 DVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 143
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGL 164
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 87
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 88 DVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 143
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGL 164
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 33 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 86
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 87 DVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 142
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 143 NIMLLDRNVPKPRIKIIDFGL 163
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 87
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 88 DVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 143
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGL 164
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 87
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 88 DVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 143
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGL 164
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 485 KEFNELGR----GSYGFVYKAVLV--DGRQVAVKRANAATIIHTNIRE-FEMELEVLCNI 537
+E ELGR G +G V++ + + + +AV ++RE F E +
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
H +IV L+G E ++ E G L L L+ + + + Q + L YL
Sbjct: 69 DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 127
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+HRD+ N+L+ + ++ DFGL
Sbjct: 128 ESKR---FVHRDIAARNVLVSATDCVKLGDFGL 157
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 87
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 88 DVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 143
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGL 164
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 87
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 88 DVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 143
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGL 164
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 87
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 88 DVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 143
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGL 164
>pdb|1JTD|B Chain B, Crystal Structure Of Beta-Lactamase Inhibitor Protein-Ii
In Complex With Tem-1 Beta-Lactamase
Length = 273
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 157 DVISGDGFSCGGVRDGGIVCWGPDSESLGVFNVTESFKVLASGKSSLCGISELSGEVKCW 216
D I+ ++ ++DG ++ WG DS+ V A ++ +G V W
Sbjct: 107 DAIAAGAWASYALKDGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVKNGGVIAW 166
Query: 217 GNNDF--VSVPPVGIRFV-SLAAGANHFCGIREDNHGVECWGSFNY--SSVPKN--SGFM 269
G+N F +VP V +A G H +++ V WG Y ++VP SG
Sbjct: 167 GDNYFGQTTVPAEAQSGVDDVAGGIFHSLALKDGK--VIAWGDNRYKQTTVPTEALSGVS 224
Query: 270 AIASSDFTTCGIRENDLVLDCWFANVSSPT 299
AIAS ++ + ++ ++ W ++ ++P+
Sbjct: 225 AIASGEWYSLALKNGKVI--AWGSSRTAPS 252
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 87
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 88 DVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 143
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGL 164
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 87
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 88 DVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 143
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGL 164
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+V L + +V E+ P G + HL G S + + Q EYL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 157
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+++D ++ DFG
Sbjct: 158 H---SLDLIYRDLKPENLMIDQQGYIKVTDFGF 187
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F+ LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 34 DQFERIKTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ +V L + +V E++P G + HL R + Q EY
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 149
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LH + +I+RD+K N+L+D ++ DFG
Sbjct: 150 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 180
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 6/151 (3%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
+V L + +V E++P G + HL R + Q EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ +I+RD+K N+L+D ++ DFG
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 6/151 (3%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
+V L + +V E++P G + HL R + Q EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ +I+RD+K N+L+D ++ DFG
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 6/151 (3%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
+V L + +V E++P G + HL R + Q EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ +I+RD+K N+L+D ++ DFG
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 19/160 (11%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIH---TNIREFEMELEVLCNIRHSNIVNL 545
LG+G+ V++ G A+K N + + +REFE VL + H NIV L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE----VLKKLNHKNIVKL 72
Query: 546 LGYCLEMGER--LLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
E R +L+ EF P G+L+ L L S L + G+ +L ++
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 602 APPIIHRDVKTLNILL----DSDWGARIADFGLLTSCERD 637
I+HR++K NI+ D ++ DFG E D
Sbjct: 133 ---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F+ LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 42 DQFERIKTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E+ P G + HL G S + + Q
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 155
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+++D ++ DFG
Sbjct: 156 EYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 33/156 (21%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
LG G+ G + + D R VAVKR + RE ++ E + H N++ +C
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD-REVQLLRE---SDEHPNVIRY--FC 85
Query: 550 LEMGERL----------LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
E + + E++ + D H GL P+ + Q GL +LH
Sbjct: 86 TEKDRQFQYIAIELCAATLQEYVEQK---DFAHLGLEPIT------LLQQTTSGLAHLH- 135
Query: 600 DAAPPIIHRDVKTLNILLD-----SDWGARIADFGL 630
+ I+HRD+K NIL+ A I+DFGL
Sbjct: 136 --SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 479 DATNGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANA---ATIIHTNIREFEMELEVL 534
D + + +G G+YG V A ++ +VA+++ + T +RE +++L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLRE----IKIL 79
Query: 535 CNIRHSNIVNL----LGYCLEMGERLLVYEFMPRGTLHDHL---HGGLSPLNWSLRLKIS 587
RH NI+ + +E + + + + + L+ L H + + L
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL----- 134
Query: 588 MQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERD 637
Q +GL+Y+H + ++HRD+K N+LL++ +I DFGL + D
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
LG G+YG V A G VA+K+ +R E+++L + +H NI+ +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENIITIFNI 77
Query: 549 CL-----EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
E ++ E M + LH + + L+ Q + ++ LH
Sbjct: 78 QRPDSFENFNEVYIIQELM-QTDLHRVISTQM--LSDDHIQYFIYQTLRAVKVLHGSN-- 132
Query: 604 PIIHRDVKTLNILLDSDWGARIADFGL 630
+IHRD+K N+L++S+ ++ DFGL
Sbjct: 133 -VIHRDLKPSNLLINSNCDLKVCDFGL 158
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F+ LG GS+G + +LV G A+K + ++ E + E +
Sbjct: 42 DQFERIRTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E+ P G + HL G S + + Q
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 155
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ADFG
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGF 188
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+V L + +V E+ P G + HL G S + + Q EYL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 157
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+++D ++ DFG
Sbjct: 158 H---SLDLIYRDLKPENLMIDQQGYIQVTDFGF 187
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 20/159 (12%)
Query: 473 RLSELKDATNGFKEFNE-LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEME 530
R L T G E E LG G +G+V + + D G QVA+K+ + N + +E
Sbjct: 5 RSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLE 63
Query: 531 LEVLCNIRHSNIVNL------LGYCLEMGERLLVYEFMPRGTLHDHLHG-----GLSPLN 579
++++ + H N+V+ L LL E+ G L +L+ GL
Sbjct: 64 IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK--E 121
Query: 580 WSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLD 618
+R +S + L YLH++ IIHRD+K NI+L
Sbjct: 122 GPIRTLLS-DISSALRYLHENR---IIHRDLKPENIVLQ 156
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
LG G+YG V A G VA+K+ +R E+++L + +H NI+ +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENIITIFNI 77
Query: 549 CL-----EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
E ++ E M + LH + + L+ Q + ++ LH
Sbjct: 78 QRPDSFENFNEVYIIQELM-QTDLHRVISTQM--LSDDHIQYFIYQTLRAVKVLHGSN-- 132
Query: 604 PIIHRDVKTLNILLDSDWGARIADFGL 630
+IHRD+K N+L++S+ ++ DFGL
Sbjct: 133 -VIHRDLKPSNLLINSNCDLKVCDFGL 158
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 473 RLSELKDATNGFKEFN--ELGRGSYGFVY---KAVLVDGRQVAVKRANAATIIHTNIREF 527
+LS ++ E+ ++GRG+YG VY + D + A+K+ I + R
Sbjct: 10 KLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACR-- 67
Query: 528 EMELEVLCNIRHSNIVNLLGYCLEMGER--LLVYEFMPRGTLH-DHLHGGLSPLNWSLRL 584
E+ +L ++H N+++L L +R L++++ H H ++L
Sbjct: 68 --EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQL 125
Query: 585 KISM------QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGAR----IADFG---LL 631
M Q G+ YLH + ++HRD+K NIL+ + R IAD G L
Sbjct: 126 PRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 632 TSCERDLTTDMKSDVHNFGIVLLEILSGRKAY 663
S + L D+ V F E+L G + Y
Sbjct: 183 NSPLKPL-ADLDPVVVTFWYRAPELLLGARHY 213
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 20/159 (12%)
Query: 473 RLSELKDATNGFKEFNE-LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEME 530
R L T G E E LG G +G+V + + D G QVA+K+ + N + +E
Sbjct: 4 RSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLE 62
Query: 531 LEVLCNIRHSNIVNL------LGYCLEMGERLLVYEFMPRGTLHDHLHG-----GLSPLN 579
++++ + H N+V+ L LL E+ G L +L+ GL
Sbjct: 63 IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK--E 120
Query: 580 WSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLD 618
+R +S + L YLH++ IIHRD+K NI+L
Sbjct: 121 GPIRTLLS-DISSALRYLHENR---IIHRDLKPENIVLQ 155
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
LG G+YG V A G VA+K+ +R E+++L + +H NI+ +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENIITIFNI 77
Query: 549 CL-----EMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
E ++ E M + LH + + L+ Q + ++ LH
Sbjct: 78 QRPDSFENFNEVYIIQELM-QTDLHRVISTQM--LSDDHIQYFIYQTLRAVKVLHGSN-- 132
Query: 604 PIIHRDVKTLNILLDSDWGARIADFGL 630
+IHRD+K N+L++S+ ++ DFGL
Sbjct: 133 -VIHRDLKPSNLLINSNCDLKVCDFGL 158
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 494 SYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMG 553
S G Y A + R+ R + + E E+ +L I+H N++ L
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSR------EDIEREVSILKEIQHPNVITLHEVYENKT 87
Query: 554 ERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTL 613
+ +L+ E + G L D L S L + Q G+ YLH + I H D+K
Sbjct: 88 DVILIGELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPE 143
Query: 614 NI-LLDSDWGA---RIADFGL 630
NI LLD + +I DFGL
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGL 164
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 488 NELGRGSYGFVYKAVLVDGRQVAVKRANAATI----IHTNIREFEMELEVLCNIRHSNIV 543
+LG G++G V+ LV+ R ++R TI + + E E+EVL ++ H NI+
Sbjct: 28 RKLGSGAFGDVH---LVEERSSGLERV-IKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 544 NLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLS---PLNWSLRLKISMQAAKGLEYLHKD 600
+ + +V E G L + + + L+ ++ Q L Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH-- 141
Query: 601 AAPPIIHRDVKTLNILLDS---DWGARIADFGL 630
+ ++H+D+K NIL +I DFGL
Sbjct: 142 -SQHVVHKDLKPENILFQDTSPHSPIKIIDFGL 173
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 485 KEFNELGR----GSYGFVYKAVLV--DGRQVAVKRANAATIIHTNIRE-FEMELEVLCNI 537
+E ELGR G +G V++ + + + +AV ++RE F E +
Sbjct: 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 448
Query: 538 RHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
H +IV L+G E ++ E G L L L+ + + + Q + L YL
Sbjct: 449 DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 507
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ +HRD+ N+L+ + ++ DFGL
Sbjct: 508 E---SKRFVHRDIAARNVLVSATDCVKLGDFGL 537
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 6/151 (3%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
+V L + +V E+ P G + HL R + Q EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ +I+RD+K N+++D ++ DFG
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGF 187
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 80/192 (41%), Gaps = 23/192 (11%)
Query: 481 TNGFKEFNELGRGSYGFVYKAVLVDGRQ----VAVKRANAATIIHTNIREFEMELEVLCN 536
++ ++ ++G G++G A L+ +Q VAVK I N++ E+ +
Sbjct: 18 SDRYELVKDIGSGNFGV---ARLMRDKQSNELVAVKYIERGEKIAANVKR---EIINHRS 71
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGL 594
+RH NIV L +V E+ G L + + G S + Q G+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGV 128
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGAR--IADFGLLTSCERDLTTDMKSDVHNFGIV 652
Y H A + HRD+K N LLD R I DFG S L + KS V +
Sbjct: 129 SYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV--LHSQPKSTVGTPAYI 183
Query: 653 LLEILSGRKAYD 664
E+L +K YD
Sbjct: 184 APEVLL-KKEYD 194
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
+ F+ LG GS+G V ++ G A+K + ++ E + + + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 541 NIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+ L + + L +V E+ P G + HL G S + + Q EYL
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 158
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+++D ++ DFG
Sbjct: 159 H---SLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIR-HSNIVNLLG 547
LG G++ V + L+ ++ AVK H R F E+E+L + H N++ L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPG-HIRSRVFR-EVEMLYQCQGHRNVLELIE 78
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHG--GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
+ E LV+E M G++ H+H + L S+ + A L++LH I
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG---I 132
Query: 606 IHRDVKTLNILLDSD---WGARIADFGL 630
HRD+K NIL + +I DFGL
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGL 160
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
+ F+ LG GS+G V ++ G A+K + ++ E + + + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 541 NIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+ L + + L +V E+ P G + HL G S + + Q EYL
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 158
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+++D ++ DFG
Sbjct: 159 H---SLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 482 NGFKEFNELGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
+ ++ +LGRG Y V++A+ + + +V VK + + + E+++L N+R
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKNKIKREIKILENLRGG 91
Query: 541 -NIVNLLGYCLEMGERL--LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
NI+ L + R LV+E + T L+ L+ ++ +R + + K L+Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV-NNTDFKQLYQTLT--DYDIRFYM-YEILKALDYC 147
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGA-RIADFGL 630
H + I+HRDVK N+++D + R+ D+GL
Sbjct: 148 H---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 80/192 (41%), Gaps = 23/192 (11%)
Query: 481 TNGFKEFNELGRGSYGFVYKAVLVDGRQ----VAVKRANAATIIHTNIREFEMELEVLCN 536
++ ++ ++G G++G A L+ +Q VAVK I N++ E+ +
Sbjct: 17 SDRYELVKDIGSGNFGV---ARLMRDKQSNELVAVKYIERGEKIDENVKR---EIINHRS 70
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGL 594
+RH NIV L +V E+ G L + + G S + Q G+
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGV 127
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGAR--IADFGLLTSCERDLTTDMKSDVHNFGIV 652
Y H A + HRD+K N LLD R I DFG S L + KS V +
Sbjct: 128 SYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV--LHSQPKSTVGTPAYI 182
Query: 653 LLEILSGRKAYD 664
E+L +K YD
Sbjct: 183 APEVLL-KKEYD 193
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 5/161 (3%)
Query: 471 VFRLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATIIHT-NIREFE 528
V RL E++ + F+ +GRG++ V + QV A+K N ++ + F
Sbjct: 50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFR 109
Query: 529 MELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISM 588
E +VL N I L + LV E+ G L L + +
Sbjct: 110 EERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLA 169
Query: 589 QAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG 629
+ ++ +H+ +HRD+K NILLD R+ADFG
Sbjct: 170 EIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFG 207
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 473 RLSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQV-AVKRANAATII-HTNIREFEME 530
++ +++ F+ +GRG++G V L + +V A+K N ++ F E
Sbjct: 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREE 124
Query: 531 LEVLCNIRHSNIVNLLGYCLEMGERL-LVYEFMPRGTL-------HDHLHGGLSPLNWSL 582
+VL N S + L Y + L LV ++ G L D L ++ +
Sbjct: 125 RDVLVN-GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARF-YLA 182
Query: 583 RLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFG 629
+ I++ + L Y +HRD+K NIL+D + R+ADFG
Sbjct: 183 EMVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFG 220
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 12/148 (8%)
Query: 490 LGRGSYGFVYKAVLVDG---RQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLL 546
LG GSYG V + + + R V + + I + E+++L +RH N++ L+
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 547 G--YCLEMGERLLVYEFMPRGT--LHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAA 602
Y E + +V E+ G + D + P+ + Q GLEYLH
Sbjct: 73 DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAH--GYFCQLIDGLEYLHSQG- 129
Query: 603 PPIIHRDVKTLNILLDSDWGARIADFGL 630
I+H+D+K N+LL + +I+ G+
Sbjct: 130 --IVHKDIKPGNLLLTTGGTLKISALGV 155
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 491 GRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEME-LEVLCNIRHSNIVNLLGY 548
G+G++G V G VA+K+ I R E++ ++ L + H NIV L Y
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKK----VIQDPRFRNRELQIMQDLAVLHHPNIVQLQSY 87
Query: 549 CLEMGER-------LLVYEFMPRGTLH----DHLHGGLSPLNWSLRLKISMQAAKGLEYL 597
+GER +V E++P TLH ++ ++P +++ + Q + + L
Sbjct: 88 FYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYRRQVAPPPILIKVFL-FQLIRSIGCL 145
Query: 598 HKDAAPPIIHRDVKTLNILL-DSDWGARIADFG 629
H + + HRD+K N+L+ ++D ++ DFG
Sbjct: 146 HLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFG 177
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEM-ELEVLCNIRH 539
+ F+ LG GS+G V ++ G A+K + ++ E + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 540 SNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGLEYL 597
+V L + +V E++ G + HL G S + + Q EYL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYL 157
Query: 598 HKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
H + +I+RD+K N+L+D ++ DFG
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 6/151 (3%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHS 540
+ F+ LG GS+G V ++ G A+K + ++ E + + + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 541 NIVNLLGYCLEMGERL-LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
+ L + + L +V E+ P G + HL R + Q EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 600 DAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
+ +I+RD+K N+++D ++ DFG
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
LG GS G V GR VAVKR I +I E++L + H N++ YC
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRM---LIDFCDIALMEIKLLTESD-DHPNVIRY--YC 76
Query: 550 LEMGERLLVYEF-MPRGTLHDHLHG-GLSPLNWSLR-----LKISMQAAKGLEYLHKDAA 602
E +R L + L D + +S N L+ + + Q A G+ +LH +
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---S 133
Query: 603 PPIIHRDVKTLNILL--------DSDWGAR-----IADFGL 630
IIHRD+K NIL+ D GA I+DFGL
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
LG GS G V GR VAVKR I +I E++L + H N++ YC
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRM---LIDFCDIALMEIKLLTESD-DHPNVIRY--YC 76
Query: 550 LEMGERLLVYEF-MPRGTLHDHLHG-GLSPLNWSLR-----LKISMQAAKGLEYLHKDAA 602
E +R L + L D + +S N L+ + + Q A G+ +LH +
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---S 133
Query: 603 PPIIHRDVKTLNILL--------DSDWGAR-----IADFGL 630
IIHRD+K NIL+ D GA I+DFGL
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 506 GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRG 565
G V V+R N + + + EL V H NIV + E +V FM G
Sbjct: 36 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 95
Query: 566 TLHD----HLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDW 621
+ D H G++ L + L+ K L+Y+H +HR VK +IL+ D
Sbjct: 96 SAKDLICTHFMDGMNELAIAYILQ---GVLKALDYIHHMG---YVHRSVKASHILISVDG 149
Query: 622 GARIADFGLLTSCERDLTTDMKSDVHNFGIVLLEIL 657
++ GL ++ + VH+F +++L
Sbjct: 150 KVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVL 183
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 506 GRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRG 565
G V V+R N + + + EL V H NIV + E +V FM G
Sbjct: 52 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 111
Query: 566 TLHD----HLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDW 621
+ D H G++ L + L+ K L+Y+H +HR VK +IL+ D
Sbjct: 112 SAKDLICTHFMDGMNELAIAYILQ---GVLKALDYIHHMG---YVHRSVKASHILISVDG 165
Query: 622 GARIADFGLLTSCERDLTTDMKSDVHNFGIVLLEIL 657
++ GL ++ + VH+F +++L
Sbjct: 166 KVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVL 199
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
LG GS G V GR VAVKR I +I E++L + H N++ YC
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRM---LIDFCDIALMEIKLLTESD-DHPNVIRY--YC 94
Query: 550 LEMGERLLVYEF-MPRGTLHDHLHG-GLSPLNWSLR-----LKISMQAAKGLEYLHKDAA 602
E +R L + L D + +S N L+ + + Q A G+ +LH +
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---S 151
Query: 603 PPIIHRDVKTLNILL--------DSDWGAR-----IADFGL 630
IIHRD+K NIL+ D GA I+DFGL
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 62 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 175
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 176 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 42 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 155
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 490 LGRGSYGFVYKAVLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYC 549
LG GS G V GR VAVKR I +I E++L + H N++ YC
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRM---LIDFCDIALMEIKLLTESD-DHPNVIRY--YC 94
Query: 550 LEMGERLLVYEF-MPRGTLHDHLHG-GLSPLNWSLR-----LKISMQAAKGLEYLHKDAA 602
E +R L + L D + +S N L+ + + Q A G+ +LH +
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---S 151
Query: 603 PPIIHRDVKTLNILL--------DSDWGAR-----IADFGL 630
IIHRD+K NIL+ D GA I+DFGL
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 28 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 141
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 142 EYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGF 174
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGY 548
+G GSYG V +A ++ R VA+K+ + + E+ +L + H ++V +L
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 549 CL-----EMGERLLVYEFMPRGTLHDHLHGGLSPLNWS-LRLKISM-QAAKGLEYLHKDA 601
+ + E +V E D +P+ + L +K + G++Y+H
Sbjct: 121 VIPKDVEKFDELYVVLEIADS----DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG 176
Query: 602 APPIIHRDVKTLNILLDSDWGARIADFGLLTSCE 635
I+HRD+K N L++ D ++ DFGL + +
Sbjct: 177 ---ILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIR-HSNIVNLLG 547
LG G++ V + L+ ++ AVK H R F E+E+L + H N++ L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPG-HIRSRVFR-EVEMLYQCQGHRNVLELIE 78
Query: 548 YCLEMGERLLVYEFMPRGTLHDHLHG--GLSPLNWSLRLKISMQAAKGLEYLHKDAAPPI 605
+ E LV+E M G++ H+H + L S+ + A L++LH I
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG---I 132
Query: 606 IHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVLLEILSGRKAYDI 665
HRD+K NIL + + C+ DL + +K + I E+L+
Sbjct: 133 AHRDLKPENILCEHP-----NQVSPVKICDFDLGSGIKLNGDCSPISTPELLT--PCGSA 185
Query: 666 EYVPPGIVE 674
EY+ P +VE
Sbjct: 186 EYMAPEVVE 194
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 65/160 (40%), Gaps = 16/160 (10%)
Query: 509 VAVKRANAATIIHTNIREFEMELEVLCNIRHSNIVNLLGYCLEMGERLLVYEFMPRGTLH 568
VAVK I N++ E+ ++RH NIV L ++ E+ G L+
Sbjct: 48 VAVKYIERGAAIDENVQR---EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY 104
Query: 569 DHL--HGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDWGAR-- 624
+ + G S + Q G+ Y H + I HRD+K N LLD R
Sbjct: 105 ERICNAGRFSEDEARFFFQ---QLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLK 158
Query: 625 IADFGLLTSCERDLTTDMKSDVHNFGIVLLEILSGRKAYD 664
I DFG S L + KS V + E+L R+ YD
Sbjct: 159 ICDFGYSKSSV--LHSQPKSTVGTPAYIAPEVLL-RQEYD 195
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ +V L + +V E++ G + HL R + Q EY
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LH + +I+RD+K N+L+D ++ DFG
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 490 LGRGSYGFVYKA-VLVDGRQVAVKRANAATIIH----TNIREFEMELEVLCNIR----HS 540
LG+G +G V+ L D QVA+K ++ ++ +E+ +L + H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 541 NIVNLLGYC-LEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHK 599
++ LL + + G L++ +P L D++ PL Q +++ H
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHS 157
Query: 600 DAAPPIIHRDVKTLNILLDSDWG-ARIADFG 629
++HRD+K NIL+D G A++ DFG
Sbjct: 158 RG---VVHRDIKDENILIDLRRGCAKLIDFG 185
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 481 TNGFKEFNELGRGSYGFVYKAVLVDGRQ----VAVKRANAATIIHTNIREFEMELEVLCN 536
++ ++ ++G G++G A L+ +Q VAVK I N++ E+ +
Sbjct: 18 SDRYELVKDIGSGNFGV---ARLMRDKQSNELVAVKYIERGEKIDENVKR---EIINHRS 71
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGL 594
+RH NIV L +V E+ G L + + G S + Q G+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGV 128
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVLL 654
Y H A + HRD+K N LLD R+ S L + KS V +
Sbjct: 129 SYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 655 EILSGRKAYD 664
E+L +K YD
Sbjct: 186 EVLL-KKEYD 194
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G S + + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+++D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGF 187
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ +V L + +V E++ G + HL R + Q EY
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LH + +I+RD+K N+L+D ++ DFG
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ +V L + +V E++ G + HL R + Q EY
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LH + +I+RD+K N+L+D ++ DFG
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 41 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLH--GGLSPLNWSLRLKISMQAAKGL 594
+ +V L + +V E++ G + HL G + + + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF---YAAQIVLTF 154
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
EYLH + +I+RD+K N+L+D ++ DFG
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 62 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ +V L + +V E++ G + HL R + Q EY
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 177
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LH + +I+RD+K N+L+D ++ DFG
Sbjct: 178 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 482 NGFKEFNELGRGSYGFVYKAVLVD----GRQVAVKRANAATIIHTNIREFEM-ELEVLCN 536
+ F LG GS+G + +LV G A+K + ++ E + E +L
Sbjct: 36 DQFDRIKTLGTGSFG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 92
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEY 596
+ +V L + +V E++ G + HL R + Q EY
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEY 151
Query: 597 LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
LH + +I+RD+K N+L+D ++ DFG
Sbjct: 152 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 182
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 13/149 (8%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIH----TNIREFEMELEVLCNIR--HSNI 542
LG G +G VY + V D VA+K I N ME+ +L + S +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 543 VNLLGYCLEMGERLLVYEFM-PRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
+ LL + +L+ E M P L D + L L Q + + + H
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 602 APPIIHRDVKTLNILLDSDWGA-RIADFG 629
++HRD+K NIL+D + G ++ DFG
Sbjct: 135 ---VLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 19/190 (10%)
Query: 481 TNGFKEFNELGRGSYGFVYKAVLVDGRQ----VAVKRANAATIIHTNIREFEMELEVLCN 536
++ ++ ++G G++G A L+ +Q VAVK I N++ E+ +
Sbjct: 18 SDRYELVKDIGSGNFGV---ARLMRDKQSNELVAVKYIERGEKIDENVKR---EIINHRS 71
Query: 537 IRHSNIVNLLGYCLEMGERLLVYEFMPRGTLHDHL--HGGLSPLNWSLRLKISMQAAKGL 594
+RH NIV L +V E+ G L + + G S + Q G+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGV 128
Query: 595 EYLHKDAAPPIIHRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMKSDVHNFGIVLL 654
Y H A + HRD+K N LLD R+ S L + K V +
Sbjct: 129 SYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAP 185
Query: 655 EILSGRKAYD 664
E+L +K YD
Sbjct: 186 EVLL-KKEYD 194
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 6/50 (12%)
Query: 584 LKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILLDSDW---GARIADFGL 630
+++ Q +G+ YLH++ I+H D+K NILL S + +I DFG+
Sbjct: 134 IRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGM 180
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHT---NIREFEMELEVLCNIRHSNIVNL 545
+G+G + V + + + G+Q AVK + A + + + + E + ++H +IV L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 546 LGYCLEMGERLLVYEFMPRGTL-HDHLHGGLSPLNWSLRL--KISMQAAKGLEYLHKDAA 602
L G +V+EFM L + + + +S + Q + L Y H +
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN- 150
Query: 603 PPIIHRDVKTLNILLDS 619
IIHRDVK +LL S
Sbjct: 151 --IIHRDVKPHCVLLAS 165
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 57/151 (37%), Gaps = 4/151 (2%)
Query: 484 FKEFNELGRGSYGFVYKA-VLVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSNI 542
F+ + LG GSYG V+K DGR AVKR+ + + E+ +
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAA 602
L E G L + + +L H + L + L +LH
Sbjct: 119 CVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG- 177
Query: 603 PPIIHRDVKTLNILLDSDWGARIADFGLLTS 633
++H DVK NI L ++ DFGLL
Sbjct: 178 --LVHLDVKPANIFLGPRGRCKLGDFGLLVE 206
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 21/180 (11%)
Query: 557 LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNIL 616
LV E +P L D L G R KI + L L K H DV+ N++
Sbjct: 319 LVMEKLPGRLLSDMLAAGEE----IDREKILGSLLRSLAALEKQG---FWHDDVRPWNVM 371
Query: 617 LDSDWGARIADFGLLTSCERDLT--TDMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVE 674
+D+ AR+ DFG + + +D + T++ V +F + + E+ + K+++ + +
Sbjct: 372 VDARQHARLIDFGSIVTTPQDCSWPTNL---VQSFFVFVNELFAENKSWNGFWRSAPVHP 428
Query: 675 WALPLIKQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQIV 734
+ LP A+ EP+ + + LA+ E ++LP+ Q EQ +
Sbjct: 429 FNLPQPWSNWLYAVWQ---------EPVERWNFVLLLALFEKKAKLPSAEQQRGATEQWI 479
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 490 LGRGSYGFVYKAVLVD-GRQVAVKRANAATIIHT---NIREFEMELEVLCNIRHSNIVNL 545
+G+G + V + + + G+Q AVK + A + + + + E + ++H +IV L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 546 LGYCLEMGERLLVYEFMPRGTL-HDHLHGGLSPLNWSLRL--KISMQAAKGLEYLHKDAA 602
L G +V+EFM L + + + +S + Q + L Y H +
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN- 152
Query: 603 PPIIHRDVKTLNILLDS 619
IIHRDVK +LL S
Sbjct: 153 --IIHRDVKPHCVLLAS 167
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 456 DSLPHPASACPGMAQVFRLSELKDATNG-FKEFNELGRGSYGFVYKAVLVDGRQ-VAVKR 513
D P C G + L ++ D NG + +LG G + V+ + + G++ VA+K
Sbjct: 13 DEQEDPNDYCKGG---YHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKV 69
Query: 514 ANAATIIHTNIREFEMELEVLCNIRHSN--------IVNLLGYCLEMG----ERLLVYEF 561
+A H + E+ +L ++R+S+ +V LL G +V+E
Sbjct: 70 VKSAE--HYTETALD-EIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEV 126
Query: 562 MPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILL 617
+ L + L KI Q +GL+YLH IIH D+K NILL
Sbjct: 127 LGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILL 180
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 557 LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNIL 616
LV E +P L D L G R KI + L L K H DV+ N++
Sbjct: 319 LVMEKLPGRLLSDMLAAGEE----IDREKILGSLLRSLAALEKQG---FWHDDVRPWNVM 371
Query: 617 LDSDWGARIADFGLLTSCERDLT--TDMKSDVHNFGIVLLEILSGRKAYDIEYVPPGIVE 674
+D+ AR+ DFG + + +D + T++ V +F + + E+ + K+++ + +
Sbjct: 372 VDARQHARLIDFGSIVTTPQDCSWPTNL---VQSFFVFVNELFAENKSWNGFWRSAPVHP 428
Query: 675 WALPLIKQGKAAAIIDRNVALPRNVEPLFKLADIAELAIRENPSELPTMSQVATWLEQ-- 732
+ LP A+ EP+ + + LA+ E ++LP+ Q EQ
Sbjct: 429 FNLPQPWSNWLYAVWQ---------EPVERWNFVLLLALFEKKAKLPSAEQQRGATEQWI 479
Query: 733 IVKDGLIL 740
I ++ ++L
Sbjct: 480 IAQETVLL 487
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 557 LVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNIL 616
LV E +P L D L G R KI + L L K H DV+ N++
Sbjct: 319 LVMEKLPGRLLSDMLAAGEE----IDREKILGSLLRSLAALEKKG---FWHDDVRPWNVM 371
Query: 617 LDSDWGARIADFGLLTSCERDLT--TDMKSDVHNFGIVLLEILSGRKAYD 664
+D+ AR+ DFG + + +D + T++ V +F + + E+ + K+++
Sbjct: 372 VDARQHARLIDFGSIVTTPQDCSWPTNL---VQSFFVFVNELFAENKSWN 418
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 17/154 (11%)
Query: 490 LGRGSYGFVYKAVLVDGRQ-VAVKRANAATIIHTNIREFEMELEVLCNIRHS------NI 542
+G+GS+G V KA Q VA+K H R+ E+ +L ++R N+
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH---RQAAEEIRILEHLRKQDKDNTMNV 161
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAA 602
+++L + +E + + L K + + L+ LHK+
Sbjct: 162 IHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR- 220
Query: 603 PPIIHRDVKTLNILLDSDW--GARIADFGLLTSC 634
IIH D+K NILL G ++ DFG +SC
Sbjct: 221 --IIHCDLKPENILLKQQGRSGIKVIDFG--SSC 250
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 606 IHRDVKTLNILLDSDWGARIADFG 629
+HRD+K N+LLD + R+ADFG
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFG 236
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 17/154 (11%)
Query: 490 LGRGSYGFVYKAVLVDGRQ-VAVKRANAATIIHTNIREFEMELEVLCNIRHS------NI 542
+G+GS+G V KA Q VA+K H R+ E+ +L ++R N+
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH---RQAAEEIRILEHLRKQDKDNTMNV 161
Query: 543 VNLLGYCLEMGERLLVYEFMPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAA 602
+++L + +E + + L K + + L+ LHK+
Sbjct: 162 IHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR- 220
Query: 603 PPIIHRDVKTLNILLDSDW--GARIADFGLLTSC 634
IIH D+K NILL G ++ DFG +SC
Sbjct: 221 --IIHCDLKPENILLKQQGRSGIKVIDFG--SSC 250
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 606 IHRDVKTLNILLDSDWGARIADFG 629
+HRD+K N+LLD + R+ADFG
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFG 220
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 461 PASACPGMAQVFRLSELKDATNG-FKEFNELGRGSYGFVYKAVLVDGRQ-VAVKRANAAT 518
P C G + L ++ D NG + +LG G + V+ + + G++ VA+K +A
Sbjct: 2 PNDYCKGG---YHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE 58
Query: 519 IIHTNIREFEMELEVLCNIRHSN--------IVNLLGYCLEMG----ERLLVYEFMPRGT 566
H + E+ +L ++R+S+ +V LL G +V+E +
Sbjct: 59 --HYTETALD-EIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHL 115
Query: 567 LHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDAAPPIIHRDVKTLNILL 617
L + L KI Q +GL+YLH IIH D+K NILL
Sbjct: 116 LKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILL 164
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 474 LSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRA-------NAATIIHTNI-- 524
++EL + + + GSYG V V +G VA+KR I+ +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCLE-----MGERLLVYEFMPRGTLHDHLHGGLSPLN 579
+ E+ +L + H NI+ L + M + LV E M R L +H
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQ----- 127
Query: 580 WSLRLKISMQAAKGLEY-----LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
R+ IS Q + Y LH ++HRD+ NILL + I DF L
Sbjct: 128 ---RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNL 180
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Query: 364 CTAIADRVCTAC-SLCQNSSCWDICGLQ--------PSSQKHWHQLHRLVLIIGCSALGL 414
++D + C ++ S W+I GL+ PS +HW QL V+ G S LGL
Sbjct: 204 AAGVSDTAASVCITITAPSXAWNIAGLKCAQIIFSNPSDAEHWQQLSP-VIKDGASTLGL 262
Query: 415 L 415
+
Sbjct: 263 I 263
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 474 LSELKDATNGFKEFNELGRGSYGFVYKAVLVDGRQVAVKRA-------NAATIIHTNI-- 524
++EL + + + GSYG V V +G VA+KR I+ +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 525 REFEMELEVLCNIRHSNIVNLLGYCLE-----MGERLLVYEFMPRGTLHDHLHGGLSPLN 579
+ E+ +L + H NI+ L + M + LV E M R L +H
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQ----- 127
Query: 580 WSLRLKISMQAAKGLEY-----LHKDAAPPIIHRDVKTLNILLDSDWGARIADFGL 630
R+ IS Q + Y LH ++HRD+ NILL + I DF L
Sbjct: 128 ---RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNL 180
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIH----TNIREFEMELEVLCNIR--HSNI 542
LG G +G VY + V D VA+K I N ME+ +L + S +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 543 VNLLGYCLEMGERLLVYEF-MPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
+ LL + +L+ E P L D + L L Q + + + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNXG 130
Query: 602 APPIIHRDVKTLNILLDSDWGA-RIADFG 629
++HRD+K NIL+D + G ++ DFG
Sbjct: 131 ---VLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIH----TNIREFEMELEVLCNIR--HSNI 542
LG G +G VY + V D VA+K I N ME+ +L + S +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 543 VNLLGYCLEMGERLLVYEF-MPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
+ LL + +L+ E P L D + L L Q + + + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 602 APPIIHRDVKTLNILLDSDWGA-RIADFG 629
++HRD+K NIL+D + G ++ DFG
Sbjct: 150 ---VLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIH----TNIREFEMELEVLCNIR--HSNI 542
LG G +G VY + V D VA+K I N ME+ +L + S +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 543 VNLLGYCLEMGERLLVYEF-MPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
+ LL + +L+ E P L D + L L Q + + + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 602 APPIIHRDVKTLNILLDSDWGA-RIADFG 629
++HRD+K NIL+D + G ++ DFG
Sbjct: 151 ---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIH----TNIREFEMELEVLCNIR--HSNI 542
LG G +G VY + V D VA+K I N ME+ +L + S +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 543 VNLLGYCLEMGERLLVYEF-MPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
+ LL + +L+ E P L D + L L Q + + + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 602 APPIIHRDVKTLNILLDSDWGA-RIADFG 629
++HRD+K NIL+D + G ++ DFG
Sbjct: 151 ---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIH----TNIREFEMELEVLCNIR--HSNI 542
LG G +G VY + V D VA+K I N ME+ +L + S +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 543 VNLLGYCLEMGERLLVYEF-MPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
+ LL + +L+ E P L D + L L Q + + + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 602 APPIIHRDVKTLNILLDSDWGA-RIADFG 629
++HRD+K NIL+D + G ++ DFG
Sbjct: 150 ---VLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIH----TNIREFEMELEVLCNIR--HSNI 542
LG G +G VY + V D VA+K I N ME+ +L + S +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 543 VNLLGYCLEMGERLLVYEF-MPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
+ LL + +L+ E P L D + L L Q + + + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 602 APPIIHRDVKTLNILLDSDWGA-RIADFG 629
++HRD+K NIL+D + G ++ DFG
Sbjct: 151 ---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Query: 607 HRDVKTLNILLDSDWGARIADFGLLTSCERDLTTDMK 643
HRDVK NIL+ +D A + DFG+ ++ TTD K
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASA-----TTDEK 188
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIH----TNIREFEMELEVLCNIR--HSNI 542
LG G +G VY + V D VA+K I N ME+ +L + S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 543 VNLLGYCLEMGERLLVYEF-MPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
+ LL + +L+ E P L D + L L Q + + + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 602 APPIIHRDVKTLNILLDSDWGA-RIADFG 629
++HRD+K NIL+D + G ++ DFG
Sbjct: 164 ---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIH----TNIREFEMELEVLCNIR--HSNI 542
LG G +G VY + V D VA+K I N ME+ +L + S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 543 VNLLGYCLEMGERLLVYEF-MPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
+ LL + +L+ E P L D + L L Q + + + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 602 APPIIHRDVKTLNILLDSDWGA-RIADFG 629
++HRD+K NIL+D + G ++ DFG
Sbjct: 164 ---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 490 LGRGSYGFVYKAV-LVDGRQVAVKRANAATIIHTNIREFEMELEVLCNIRHSN----IVN 544
+G+GS+G V KA V+ VA+K N + E+ L L N + IV+
Sbjct: 43 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAF-LNQAQIEVRLLELMNKHDTEMKYYIVH 101
Query: 545 LLGYCLEMGERLLVYEFMPRGTLHDHLHG-GLSPLNWSLRLKISMQAAKGLEYLHKDAAP 603
L + + LV+E + L+D L ++ +L K + Q L +L A P
Sbjct: 102 LKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL---ATP 157
Query: 604 P--IIHRDVKTLNILL--DSDWGARIADFGLLTSCE 635
IIH D+K NILL +I DFG +SC+
Sbjct: 158 ELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQ 191
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIH----TNIREFEMELEVLCNIR--HSNI 542
LG G +G VY + V D VA+K I N ME+ +L + S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 543 VNLLGYCLEMGERLLVYEF-MPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
+ LL + +L+ E P L D + L L Q + + + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 602 APPIIHRDVKTLNILLDSDWGA-RIADFG 629
++HRD+K NIL+D + G ++ DFG
Sbjct: 163 ---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Query: 490 LGRGSYGFVYKAVLV-DGRQVAVKRANAATIIH----TNIREFEMELEVLCNIR--HSNI 542
LG G +G VY + V D VA+K I N ME+ +L + S +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 543 VNLLGYCLEMGERLLVYEF-MPRGTLHDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKDA 601
+ LL + +L+ E P L D + L L Q + + + H
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCG 169
Query: 602 APPIIHRDVKTLNILLDSDWGA-RIADFG 629
++HRD+K NIL+D + G ++ DFG
Sbjct: 170 ---VLHRDIKDENILIDLNRGELKLIDFG 195
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,383,593
Number of Sequences: 62578
Number of extensions: 961693
Number of successful extensions: 4120
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 368
Number of HSP's that attempted gapping in prelim test: 2115
Number of HSP's gapped (non-prelim): 1281
length of query: 740
length of database: 14,973,337
effective HSP length: 106
effective length of query: 634
effective length of database: 8,340,069
effective search space: 5287603746
effective search space used: 5287603746
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)