Your job contains 1 sequence.
>040693
AVKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKL
DAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQC
QEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCP
PGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGG
GAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGT
APGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVSNGCIYMGNGY
KVTVGFGNKNFTSGTSLYAFCV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040693
(382 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|CPS_1887 - symbol:CPS_1887 "quinoprotein alcohol... 116 2.8e-08 2
UNIPROTKB|Q8GR64 - symbol:qbdA "Quinohemoprotein alcohol ... 110 8.4e-07 3
TIGR_CMR|SPO_1508 - symbol:SPO_1508 "quinoprotein ethanol... 113 7.4e-06 2
UNIPROTKB|Q4KEL0 - symbol:pedE "Quinoprotein ethanol dehy... 90 1.2e-05 3
UNIPROTKB|Q4KEK5 - symbol:pedH "Quinoprotein ethanol dehy... 86 0.00019 2
UNIPROTKB|Q48EX4 - symbol:gcd "Quinoprotein glucose dehyd... 82 0.00078 3
>TIGR_CMR|CPS_1887 [details] [associations]
symbol:CPS_1887 "quinoprotein alcohol dehydrogenase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006069 "ethanol
oxidation" evidence=ISS] [GO:0016614 "oxidoreductase activity,
acting on CH-OH group of donors" evidence=ISS] InterPro:IPR001479
InterPro:IPR017512 PROSITE:PS00364 Pfam:PF01011 INTERPRO:IPR002372
GO:GO:0016020 GO:GO:0005509 GO:GO:0030288 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR018391 InterPro:IPR011047
SMART:SM00564 SUPFAM:SSF50998 GO:GO:0016614 eggNOG:COG4993
TIGRFAMs:TIGR03075 HOGENOM:HOG000217981 KO:K00114
RefSeq:YP_268617.1 ProteinModelPortal:Q483Z8 SMR:Q483Z8
STRING:Q483Z8 GeneID:3518846 KEGG:cps:CPS_1887 PATRIC:21466917
OMA:GFPFVDK ProtClustDB:CLSK866934
BioCyc:CPSY167879:GI48-1957-MONOMER Uniprot:Q483Z8
Length = 587
Score = 116 (45.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 48/184 (26%), Positives = 76/184 (41%)
Query: 1 AVKRSNGKLVWKTKLDDHARSF-ITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAK 59
A+ + GK+VWK K++D+ + IT + KG G + E G+ G +
Sbjct: 156 ALHKDTGKVVWKKKVEDYKAGYSITAAPIIVKGKVITGVAGGEFGVV--------GKVRA 207
Query: 60 LDAKTGRILWQTFMLPDNFG---KLNEYAGAAIWGSSPSID-PIR----NHVYIATGNLY 111
DA G+++W+ + + G K + I G P P G Y
Sbjct: 208 YDATNGKLVWERPTVEGHMGYIWKNGKKVDNGISGGKPGQTWPAELWKSGGAAPWLGGTY 267
Query: 112 SVPLHIRQCQEENNQTTPTSPDKCIEPENH--SNSLLALDLDTGKIVWYKQLGGYDVW-F 168
+ + N P + + P ++ S+S LA+D DTGKIVW+ Q +D W F
Sbjct: 268 DADVDLLFFGTGN----PAPWNSHLRPGDNLFSSSRLAIDPDTGKIVWHFQTTPHDGWDF 323
Query: 169 GACN 172
N
Sbjct: 324 DGVN 327
Score = 87 (35.7 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 265 FNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAP---GPVTVANGVLFGGSTYRQG 321
F +K + N G A+D G V+W N AP G + A ++F G+ +G
Sbjct: 461 FTIK-AINKDYIGVLKAIDPKTGEVVWRY----NNYAPLWGGVLATAGNLVFTGNP--EG 513
Query: 322 PIYAMDVKTGKILWSYDTGATIYG 345
+ +D KTG++ + ++TG+ I G
Sbjct: 514 YLLGLDAKTGEVKYKFNTGSGIVG 537
Score = 83 (34.3 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 51/221 (23%), Positives = 83/221 (37%)
Query: 183 PSPDADFGEAPMMLSM-YRNKVKHDIVVAV-QKSGFAWALDRDSGSLIWSMEXXXXXXXX 240
P DF ++S Y+ K A ++GF + L+R++G I
Sbjct: 317 PHDGWDFDGVNELISFDYKQNGKTVKAAATADRNGFFYVLNRENGDFIRGFPFVDKQTWA 376
Query: 241 XXXXXXXTDERRIYTNIANSQHKNFNLKPSKNSTIA------GG--WVAMDASNGNVLWS 292
+ R IY + + + +K ST+ GG W+ M S L+
Sbjct: 377 SGLDK---NGRPIYIDSNRPTDPSKSKDGNKGSTVVAAPAFLGGKNWMPMAYSQDTELFY 433
Query: 293 TADPSNGTAPG----PVTVANGVLF--GGSTYRQ------GPIYAMDVKTGKILWSYDTG 340
PSN P G + G T + G + A+D KTG+++W Y+
Sbjct: 434 V--PSNEWEMDIWNEPTAYKKGAAYLGAGFTIKAINKDYIGVLKAIDPKTGEVVWRYNNY 491
Query: 341 ATIYGGASVSNG-CIYMGNGYKVTVGFGNKNFTSGTSLYAF 380
A ++GG + G ++ GN +G K +G Y F
Sbjct: 492 APLWGGVLATAGNLVFTGNPEGYLLGLDAK---TGEVKYKF 529
>UNIPROTKB|Q8GR64 [details] [associations]
symbol:qbdA "Quinohemoprotein alcohol dehydrogenase ADH
IIB" species:303 "Pseudomonas putida" [GO:0005509 "calcium ion
binding" evidence=IDA] [GO:0009055 "electron carrier activity"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IDA]
[GO:0020037 "heme binding" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IDA] InterPro:IPR001479 InterPro:IPR009056
InterPro:IPR017512 PROSITE:PS00363 PROSITE:PS00364 PROSITE:PS51007
GO:GO:0016020 GO:GO:0009055 GO:GO:0016491 GO:GO:0005509
GO:GO:0030288 GO:GO:0020037 InterPro:IPR018391 InterPro:IPR011047
SMART:SM00564 SUPFAM:SSF50998 GO:GO:0016614 SUPFAM:SSF46626
TIGRFAMs:TIGR03075 EMBL:AB091400 PDB:1KV9 PDBsum:1KV9
ProteinModelPortal:Q8GR64 SMR:Q8GR64 EvolutionaryTrace:Q8GR64
Uniprot:Q8GR64
Length = 690
Score = 110 (43.8 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 47/187 (25%), Positives = 81/187 (43%)
Query: 1 AVKRSNGKLVWKTKLDDHARSF-ITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAK 59
A+ GK +W + D A+ + IT + KG +G E G+ +G ++
Sbjct: 153 ALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGV--------RGFVSA 204
Query: 60 LDAKTGRILWQTFMLPDN------FGKLNEYA-------------GAAIWGSSPSIDPIR 100
DA TG++ W+ + +P + +L E A G +W S + DP
Sbjct: 205 YDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSM-AYDPEL 263
Query: 101 NHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQ 160
+ +Y+ TGN P + R+ + +P D + +S+LA+ DTGK+ W+ Q
Sbjct: 264 DLLYVGTGN--GSPWN-REVR------SPGGGDNL-----YLSSILAIRPDTGKLAWHYQ 309
Query: 161 LGGYDVW 167
+ D W
Sbjct: 310 VTPGDSW 316
Score = 68 (29.0 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 22/107 (20%), Positives = 42/107 (39%)
Query: 273 STIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGK 332
+ ++G +A D W P++ G ++ A ++F G+ G ++A G+
Sbjct: 456 AVVSGALLAWDPVKQKAAWKVPYPTHWNG-GTLSTAGNLVFQGTA--AGQMHAYSADKGE 512
Query: 333 ILWSYDTGATIYGGASVSNGCIYMGNGY-KVTVGFGN-KNFTSGTSL 377
LW ++ + I G Y + G+G T G S+
Sbjct: 513 ALWQFEAQSGIVAAPMTFE---LAGRQYVAIMAGWGGVATLTGGESM 556
Score = 52 (23.4 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 169 GACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLI 228
G W+ PG S D + + + + +++ K+GF + LDR +G LI
Sbjct: 302 GKLAWHYQVT--PGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 359
>TIGR_CMR|SPO_1508 [details] [associations]
symbol:SPO_1508 "quinoprotein ethanol dehydrogenase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006066 "alcohol
metabolic process" evidence=ISS] [GO:0016614 "oxidoreductase
activity, acting on CH-OH group of donors" evidence=ISS]
InterPro:IPR001479 InterPro:IPR017512 PROSITE:PS00364 GO:GO:0016020
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0005509 GO:GO:0030288
InterPro:IPR018391 InterPro:IPR011047 SMART:SM00564 SUPFAM:SSF50998
GO:GO:0016614 TIGRFAMs:TIGR03075 HOGENOM:HOG000217981 KO:K00114
ProtClustDB:CLSK866934 RefSeq:YP_166749.1 ProteinModelPortal:Q5LTA6
SMR:Q5LTA6 GeneID:3193500 KEGG:sil:SPO1508 PATRIC:23376331
OMA:NREDGKF Uniprot:Q5LTA6
Length = 606
Score = 113 (44.8 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 265 FNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIY 324
F +KP+ I G A+D G + W + + G +T A G++F G+ +G
Sbjct: 474 FTIKPNYEDHI-GSLKAIDPDTGELKWEFKNDAPLWG-GVMTTAGGLVFTGTP--EGKFI 529
Query: 325 AMDVKTGKILWSYDTGATIYG 345
A D +TG+ILWS+ TG+ I G
Sbjct: 530 AFDDETGEILWSFQTGSGIVG 550
Score = 67 (28.6 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 20/80 (25%), Positives = 34/80 (42%)
Query: 1 AVKRSNGKLVWKTKLDDHARSF-ITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAK 59
A+ G +VW K+ D+ + T + KG G S E G+ G +
Sbjct: 169 ALDLKTGDVVWNKKIADYKAGYSYTAAPLIVKGLVITGNSGGEFGIV--------GEVQA 220
Query: 60 LDAKTGRILWQTFMLPDNFG 79
DA+TG ++W ++ + G
Sbjct: 221 RDAETGEMVWTRPVIEGHMG 240
Score = 60 (26.2 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 145 LLALDLDTGKIVWYKQLGGY 164
++ALDL TG +VW K++ Y
Sbjct: 167 IVALDLKTGDVVWNKKIADY 186
Score = 38 (18.4 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 60 LDAKTGRILWQ-TFMLPDNFGKLNEYA--GAAIWG 91
+D TG LWQ LP+ + G AI+G
Sbjct: 121 IDVNTGEELWQYDARLPEGILPCCDVINRGGAIYG 155
>UNIPROTKB|Q4KEL0 [details] [associations]
symbol:pedE "Quinoprotein ethanol dehydrogenase PedE"
species:220664 "Pseudomonas protegens Pf-5" [GO:0005509 "calcium
ion binding" evidence=ISS] [GO:0006066 "alcohol metabolic process"
evidence=ISS] [GO:0016614 "oxidoreductase activity, acting on CH-OH
group of donors" evidence=ISS] [GO:0048038 "quinone binding"
evidence=ISS] InterPro:IPR001479 InterPro:IPR017512 PROSITE:PS00363
PROSITE:PS00364 Pfam:PF01011 INTERPRO:IPR002372 GO:GO:0016020
GO:GO:0005509 GO:GO:0030288 GO:GO:0048038 EMBL:CP000076
GenomeReviews:CP000076_GR InterPro:IPR018391 InterPro:IPR011047
SMART:SM00564 SUPFAM:SSF50998 GO:GO:0006066 GO:GO:0016614
eggNOG:COG4993 TIGRFAMs:TIGR03075 HOGENOM:HOG000217981 KO:K00114
ProtClustDB:CLSK866934 GO:GO:0052936 GO:GO:0052935
RefSeq:YP_259323.1 ProteinModelPortal:Q4KEL0 SMR:Q4KEL0
STRING:Q4KEL0 GeneID:3478832 KEGG:pfl:PFL_2216 PATRIC:19873689
OMA:VEGHMGR BioCyc:PFLU220664:GIX8-2227-MONOMER Uniprot:Q4KEL0
Length = 631
Score = 90 (36.7 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 29/89 (32%), Positives = 42/89 (47%)
Query: 281 AMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTG 340
AMD + G ++W + A G + ++F G+ G A D KTGK LW + TG
Sbjct: 512 AMDPTTGKLVWEHKEHLPLWA-GVLATKGNLVFTGTG--DGFFKAFDAKTGKELWKFQTG 568
Query: 341 ATIYGGASV--SNGCIYMGNGYKVTVGFG 367
+ I +G Y+G VTVG+G
Sbjct: 569 SGIVSPPITWEQDGEQYIG----VTVGYG 593
Score = 73 (30.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 26/90 (28%), Positives = 40/90 (44%)
Query: 1 AVKRSNGKLVWKTKLDDHARSFITMSG--------TYYKGAYYVGTSSIEEGLTFELCCT 52
A+ ++ GK+VW K DH+ + TM+G T K G+S E G+
Sbjct: 173 ALDKNTGKVVWNKKFGDHSAGY-TMTGAPVLIKDKTSGKVLLIHGSSGDEFGVV------ 225
Query: 53 FQGSLAKLDAKTGRILWQTFMLPDNFGKLN 82
G L D +TG +W + + G+LN
Sbjct: 226 --GQLFARDPETGEEVWMRPFVEGHMGRLN 253
Score = 70 (29.7 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 111 YSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWF 168
+ +P +IR C + N+ DK I ++ALD +TGK+VW K+ G + +
Sbjct: 138 HRLPDNIRPCCDVVNRGAAIYGDK-IYFGTLDARVIALDKNTGKVVWNKKFGDHSAGY 194
Score = 64 (27.6 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 60 LDAKTGRILWQ-TFMLPDNFGKLNEYA--GAAIWG 91
LDAKTG+ LW LPDN + GAAI+G
Sbjct: 125 LDAKTGKRLWTYNHRLPDNIRPCCDVVNRGAAIYG 159
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 22/91 (24%), Positives = 38/91 (41%)
Query: 79 GKLNEYA--GAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCI 136
GK+ ++ G A W S+ S D N + + GN R ++ N P D
Sbjct: 277 GKVEAWSHGGGAPWQSA-SFDAETNTIIVGAGNPGPWNTWARTAKDGN----PHDYDSL- 330
Query: 137 EPENHSNSLLALDLDTGKIVWYKQLGGYDVW 167
+++ + +D TG++ W+ Q D W
Sbjct: 331 ----YTSGQVGVDPSTGEVKWFYQHTPNDAW 357
Score = 50 (22.7 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 19/69 (27%), Positives = 31/69 (44%)
Query: 163 GYDVWFGACNWYLNPNCPPGPSPDADF-GEAPMMLSMYRNKVKHDIVVAV---QKSGFAW 218
G D G W+ P+ DF G ++L Y+ K +V A ++GF +
Sbjct: 337 GVDPSTGEVKWFYQHT----PNDAWDFSGNNELVLFDYKGK-DGKVVKATGHADRNGFFY 391
Query: 219 ALDRDSGSL 227
+DR++G L
Sbjct: 392 VVDRNNGKL 400
>UNIPROTKB|Q4KEK5 [details] [associations]
symbol:pedH "Quinoprotein ethanol dehydrogenase PedH"
species:220664 "Pseudomonas protegens Pf-5" [GO:0005509 "calcium
ion binding" evidence=ISS] [GO:0006066 "alcohol metabolic process"
evidence=ISS] [GO:0016614 "oxidoreductase activity, acting on CH-OH
group of donors" evidence=ISS] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=ISS] [GO:0048038 "quinone binding"
evidence=ISS] InterPro:IPR001479 InterPro:IPR017512 PROSITE:PS00364
Pfam:PF01011 INTERPRO:IPR002372 GO:GO:0016020 GO:GO:0005509
GO:GO:0030288 GO:GO:0048038 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR018391 InterPro:IPR011047 SMART:SM00564 SUPFAM:SSF50998
GO:GO:0006066 GO:GO:0016614 eggNOG:COG4993 TIGRFAMs:TIGR03075
HOGENOM:HOG000217981 KO:K00114 OMA:GFPFVDK ProtClustDB:CLSK866934
RefSeq:YP_259328.1 ProteinModelPortal:Q4KEK5 SMR:Q4KEK5
STRING:Q4KEK5 World-2DPAGE:0008:Q4KEK5 GeneID:3477139
KEGG:pfl:PFL_2221 PATRIC:19873699
BioCyc:PFLU220664:GIX8-2232-MONOMER GO:GO:0052936 GO:GO:0052935
Uniprot:Q4KEK5
Length = 591
Score = 86 (35.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 47/192 (24%), Positives = 73/192 (38%)
Query: 1 AVKRSNGKLVWKTKLDDHARSF-ITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAK 59
A+ + GK+VW K+ DH + I+ + G G + E G+ G +
Sbjct: 157 ALNKDTGKVVWSKKVADHKEGYSISAAPMMVNGKLITGVAGGEFGVV--------GKIQA 208
Query: 60 LDAKTGRILWQTFMLPDNFGKLNEYAGAAIWG-SSPSIDPIRNHVYIATGNLYSVPLHIR 118
D K G +LW + + G + + A G S TG + P
Sbjct: 209 YDPKNGELLWMRPTVEGHMGYVYKDGKAIENGISGGEAGKTWPGDLWKTGG--AAPWLGG 266
Query: 119 QCQEENNQT-----TPTSPDKCIEP-EN-HSNSLLALDLDTGKIVWYKQLGGYDVW-FGA 170
E N P + + P +N +S+S LAL+ D G I W+ Q +D W F
Sbjct: 267 YYDPETNLLLFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKWHFQSTPHDGWDFDG 326
Query: 171 CNWYLNPNCPPG 182
N ++ N G
Sbjct: 327 VNELISFNYKEG 338
Score = 82 (33.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 265 FNLKPSKNSTIAGGWVAMDASNGNVLWSTAD--PSNGTAPGPVTVANGVLFGGSTYRQGP 322
F +KP N G A+D +G +W + P G G +T ++F G+ +G
Sbjct: 459 FTIKPL-NEDYIGVLRAIDPISGKEVWRHKNFAPLWG---GVLTTKGNLVFTGTP--EGF 512
Query: 323 IYAMDVKTGKILWSYDTGATIYG 345
+ A + KTG+ +W + TG+ + G
Sbjct: 513 LQAFNAKTGEKVWEFQTGSGVLG 535
>UNIPROTKB|Q48EX4 [details] [associations]
symbol:gcd "Quinoprotein glucose dehydrogenase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0005975 "carbohydrate metabolic process" evidence=ISS]
[GO:0008876 "quinoprotein glucose dehydrogenase activity"
evidence=ISS] InterPro:IPR017511 Pfam:PF01011 INTERPRO:IPR002372
GO:GO:0016021 GO:GO:0005975 GO:GO:0048038 InterPro:IPR018391
InterPro:IPR011047 SMART:SM00564 SUPFAM:SSF50998 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG4993 HOGENOM:HOG000116843
KO:K00117 GO:GO:0008876 TIGRFAMs:TIGR03074 RefSeq:YP_276063.1
STRING:Q48EX4 GeneID:3555593 KEGG:psp:PSPPH_3927 PATRIC:19977299
OMA:TRNSPNM ProtClustDB:CLSK867151 Uniprot:Q48EX4
Length = 805
Score = 82 (33.9 bits), Expect = 0.00079, Sum P(3) = 0.00078
Identities = 32/119 (26%), Positives = 48/119 (40%)
Query: 55 GSLAKLDAKTGRILWQ------TFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATG 108
G + D TGR++W P GK+ +W S S+D +Y+ G
Sbjct: 384 GVIRTYDVHTGRLVWNWDSGNPEETAPIAEGKIYTRNSPNMW-SMFSVDEKLGMIYLPMG 442
Query: 109 NLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVW 167
N P + TP S E +S L+ALD+ TG++ W Q +D+W
Sbjct: 443 N--QTP------DQWGGDRTPDS-------EKYSAGLVALDIATGRVRWNYQFTHHDLW 486
Score = 68 (29.0 bits), Expect = 0.00079, Sum P(3) = 0.00078
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 296 PSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILW 335
PS G GP+T A+G+ F T Q + A DV+ GK LW
Sbjct: 721 PSLG---GPITTASGLAFLSGTLDQY-LRAYDVRNGKQLW 756
Score = 55 (24.4 bits), Expect = 0.00079, Sum P(3) = 0.00078
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 186 DADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLI 228
D D G P +L M V+A K G + LDR +G I
Sbjct: 487 DMDVGGQPTLLDMKTADGVKPAVLASTKQGSIYVLDRSTGQPI 529
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 382 367 0.00084 117 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 619 (66 KB)
Total size of DFA: 284 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.40u 0.11s 29.51t Elapsed: 00:00:01
Total cpu time: 29.40u 0.11s 29.51t Elapsed: 00:00:01
Start: Sat May 11 07:36:03 2013 End: Sat May 11 07:36:04 2013