Query 040693
Match_columns 382
No_of_seqs 120 out of 1512
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 17:30:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040693.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040693hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w6s_A Methanol dehydrogenase 100.0 7.5E-35 2.6E-39 297.3 38.7 335 1-382 135-580 (599)
2 1flg_A Protein (quinoprotein e 100.0 2E-34 6.8E-39 294.2 35.8 342 1-382 131-579 (582)
3 2ad6_A Methanol dehydrogenase 100.0 1.2E-32 4.2E-37 280.6 38.9 315 1-362 129-528 (571)
4 1yiq_A Quinohemoprotein alcoho 100.0 4.4E-32 1.5E-36 282.4 35.2 338 1-382 135-567 (689)
5 1kb0_A Quinohemoprotein alcoho 100.0 1.4E-31 4.9E-36 277.9 34.7 337 1-382 142-565 (677)
6 3q7m_A Lipoprotein YFGL, BAMB; 100.0 6.9E-31 2.4E-35 253.2 34.1 267 1-382 67-346 (376)
7 1kv9_A Type II quinohemoprotei 100.0 2E-30 6.8E-35 269.1 35.5 338 1-382 131-550 (668)
8 3q7m_A Lipoprotein YFGL, BAMB; 100.0 2.6E-29 8.9E-34 242.1 33.0 269 5-381 26-304 (376)
9 1flg_A Protein (quinoprotein e 100.0 1.5E-27 5E-32 243.5 34.5 219 2-296 39-310 (582)
10 2ad6_A Methanol dehydrogenase 100.0 7.4E-27 2.5E-31 237.9 34.1 300 1-382 77-503 (571)
11 1w6s_A Methanol dehydrogenase 100.0 2.9E-27 9.8E-32 241.4 30.8 305 1-382 77-512 (599)
12 1kb0_A Quinohemoprotein alcoho 100.0 9.6E-27 3.3E-31 241.7 33.0 298 2-382 50-516 (677)
13 1yiq_A Quinohemoprotein alcoho 100.0 2.4E-26 8.1E-31 239.2 33.9 306 1-382 84-514 (689)
14 1kv9_A Type II quinohemoprotei 99.9 2.1E-25 7E-30 231.4 33.4 304 1-382 80-497 (668)
15 3hxj_A Pyrrolo-quinoline quino 99.9 3.3E-23 1.1E-27 194.6 17.8 282 1-382 3-292 (330)
16 2hz6_A Endoplasmic reticulum t 99.9 2E-26 6.9E-31 222.5 -7.1 245 1-372 23-278 (369)
17 2hz6_A Endoplasmic reticulum t 99.9 3.4E-25 1.2E-29 213.9 0.9 236 25-381 3-248 (369)
18 3no2_A Uncharacterized protein 99.9 7.7E-20 2.6E-24 169.4 22.9 227 54-381 14-260 (276)
19 3hxj_A Pyrrolo-quinoline quino 99.8 6E-19 2E-23 165.4 24.1 160 141-363 155-317 (330)
20 2be1_A Serine/threonine-protei 99.8 5E-20 1.7E-24 174.2 11.8 245 30-371 9-295 (339)
21 3no2_A Uncharacterized protein 99.8 5.6E-18 1.9E-22 156.8 22.5 232 1-342 19-264 (276)
22 2be1_A Serine/threonine-protei 99.7 1E-16 3.6E-21 151.5 8.8 187 143-380 20-239 (339)
23 3vgz_A Uncharacterized protein 99.6 8.4E-12 2.9E-16 117.2 31.7 272 2-382 74-353 (353)
24 3dsm_A Uncharacterized protein 99.5 4.5E-12 1.5E-16 119.6 28.3 274 2-382 22-310 (328)
25 3vgz_A Uncharacterized protein 99.5 1.3E-11 4.4E-16 115.9 30.7 250 31-381 52-311 (353)
26 3dsm_A Uncharacterized protein 99.4 2.8E-10 9.5E-15 107.3 26.8 227 54-376 16-256 (328)
27 1l0q_A Surface layer protein; 99.4 6.2E-10 2.1E-14 106.2 27.9 260 2-381 17-283 (391)
28 1pby_B Quinohemoprotein amine 99.3 1.9E-09 6.4E-14 100.0 25.7 291 2-382 16-319 (337)
29 2ovr_B FBW7, F-BOX/WD repeat p 99.2 8.5E-09 2.9E-13 100.5 28.7 252 2-380 144-398 (445)
30 1l0q_A Surface layer protein; 99.2 5.1E-09 1.8E-13 99.8 25.0 221 54-380 11-240 (391)
31 3bws_A Protein LP49; two-domai 99.2 4.6E-09 1.6E-13 101.6 23.6 247 31-381 133-398 (433)
32 3bws_A Protein LP49; two-domai 99.1 1.6E-08 5.6E-13 97.6 24.1 215 54-370 190-431 (433)
33 3sjl_D Methylamine dehydrogena 99.1 2.9E-08 9.8E-13 95.4 25.1 280 2-381 64-371 (386)
34 2ovr_B FBW7, F-BOX/WD repeat p 99.1 5.4E-08 1.8E-12 94.8 27.0 229 29-380 127-355 (445)
35 1jmx_B Amine dehydrogenase; ox 99.1 4.5E-08 1.5E-12 91.2 24.2 231 54-382 20-334 (349)
36 3nok_A Glutaminyl cyclase; bet 99.1 3.3E-08 1.1E-12 89.5 21.6 162 143-360 75-255 (268)
37 3nol_A Glutamine cyclotransfer 99.0 3.5E-08 1.2E-12 89.2 21.6 164 143-361 65-246 (262)
38 1pby_B Quinohemoprotein amine 99.0 1.4E-07 4.6E-12 87.3 26.1 227 54-380 10-276 (337)
39 3u4y_A Uncharacterized protein 99.0 9.9E-08 3.4E-12 88.6 25.1 256 2-370 25-303 (331)
40 1nir_A Nitrite reductase; hemo 99.0 2E-07 6.7E-12 94.0 28.3 254 2-358 164-439 (543)
41 1p22_A F-BOX/WD-repeat protein 99.0 1.5E-07 5E-12 91.5 26.2 249 2-372 158-415 (435)
42 3c75_H MADH, methylamine dehyd 99.0 1.1E-07 3.8E-12 92.6 24.4 279 2-380 104-409 (426)
43 3nol_A Glutamine cyclotransfer 99.0 7.3E-08 2.5E-12 87.2 20.6 165 23-296 44-211 (262)
44 2iwa_A Glutamine cyclotransfer 99.0 1.4E-07 4.7E-12 86.0 22.4 166 143-362 44-228 (266)
45 3v7d_B Cell division control p 99.0 5.1E-07 1.7E-11 88.0 28.2 276 2-378 147-426 (464)
46 3ow8_A WD repeat-containing pr 99.0 4.9E-07 1.7E-11 84.5 26.9 211 54-367 101-317 (321)
47 3mbr_X Glutamine cyclotransfer 99.0 1.9E-07 6.3E-12 83.8 22.5 164 143-361 43-225 (243)
48 2iwa_A Glutamine cyclotransfer 99.0 7.1E-08 2.4E-12 87.9 19.9 193 32-331 32-238 (266)
49 3v7d_B Cell division control p 98.9 1.6E-07 5.5E-12 91.6 23.7 167 142-364 289-456 (464)
50 3nok_A Glutaminyl cyclase; bet 98.9 1.5E-07 5E-12 85.3 21.3 164 24-296 57-220 (268)
51 1p22_A F-BOX/WD-repeat protein 98.9 6.8E-07 2.3E-11 86.8 26.9 212 54-369 152-363 (435)
52 2mad_H Methylamine dehydrogena 98.9 9.5E-07 3.2E-11 84.7 27.3 278 2-379 52-356 (373)
53 3mbr_X Glutamine cyclotransfer 98.9 2E-07 7E-12 83.5 20.6 169 22-296 21-189 (243)
54 1jmx_B Amine dehydrogenase; ox 98.9 2.8E-07 9.5E-12 85.7 22.6 61 276-341 274-336 (349)
55 1nir_A Nitrite reductase; hemo 98.9 7.7E-07 2.6E-11 89.6 27.2 230 31-371 148-402 (543)
56 4ery_A WD repeat-containing pr 98.9 1.9E-06 6.6E-11 79.3 27.9 205 54-357 86-296 (312)
57 3u4y_A Uncharacterized protein 98.9 6.3E-07 2.2E-11 83.1 23.5 229 31-376 9-255 (331)
58 2ynn_A Coatomer subunit beta'; 98.9 4.8E-07 1.6E-11 83.6 22.5 192 54-341 76-270 (304)
59 1gxr_A ESG1, transducin-like e 98.9 7.9E-07 2.7E-11 82.0 23.9 206 54-362 118-329 (337)
60 3ow8_A WD repeat-containing pr 98.8 1.9E-06 6.5E-11 80.4 25.0 181 142-380 101-286 (321)
61 3sjl_D Methylamine dehydrogena 98.8 1.1E-06 3.6E-11 84.5 23.5 260 26-381 39-328 (386)
62 1r5m_A SIR4-interacting protei 98.8 1.4E-06 4.8E-11 82.9 24.4 240 54-381 67-327 (425)
63 3zwl_B Eukaryotic translation 98.8 1.2E-06 4.2E-11 81.6 23.5 228 54-370 95-345 (369)
64 1qks_A Cytochrome CD1 nitrite 98.8 3.3E-06 1.1E-10 85.5 27.7 257 2-359 182-459 (567)
65 3c75_H MADH, methylamine dehyd 98.8 1.2E-06 4E-11 85.5 23.4 258 29-381 82-367 (426)
66 4gqb_B Methylosome protein 50; 98.8 3.5E-07 1.2E-11 86.6 19.3 223 54-371 102-331 (344)
67 3odt_A Protein DOA1; ubiquitin 98.8 1.2E-05 4.3E-10 73.1 29.2 255 1-381 1-263 (313)
68 3mkq_A Coatomer beta'-subunit; 98.8 3.4E-06 1.2E-10 88.0 28.1 228 3-342 41-271 (814)
69 3hx6_A Type 4 fimbrial biogene 98.8 3.1E-06 1E-10 84.0 25.3 109 142-289 163-287 (570)
70 1r5m_A SIR4-interacting protei 98.7 1.5E-06 5.2E-11 82.7 22.5 227 54-370 129-360 (425)
71 4ery_A WD repeat-containing pr 98.7 8.8E-06 3E-10 74.8 26.9 224 54-380 44-275 (312)
72 3hfq_A Uncharacterized protein 98.7 8.6E-06 3E-10 76.1 26.9 161 196-378 146-324 (347)
73 1q7f_A NHL, brain tumor CG1071 98.7 2.9E-05 9.8E-10 70.4 29.6 234 31-370 40-279 (286)
74 1qks_A Cytochrome CD1 nitrite 98.7 2.3E-06 7.8E-11 86.6 24.1 221 31-359 166-408 (567)
75 2mad_H Methylamine dehydrogena 98.7 2E-05 6.7E-10 75.4 28.5 237 56-380 48-314 (373)
76 1gxr_A ESG1, transducin-like e 98.7 1.1E-05 3.9E-10 74.1 26.1 144 205-379 153-302 (337)
77 3zwl_B Eukaryotic translation 98.7 5.5E-06 1.9E-10 77.1 23.9 210 54-361 53-281 (369)
78 3vl1_A 26S proteasome regulato 98.7 8.3E-06 2.8E-10 78.0 25.3 222 54-371 118-365 (420)
79 4aez_A CDC20, WD repeat-contai 98.7 6.2E-06 2.1E-10 79.0 24.3 256 3-377 119-384 (401)
80 2ynn_A Coatomer subunit beta'; 98.7 1.1E-05 3.8E-10 74.3 25.1 225 54-380 34-266 (304)
81 4aez_A CDC20, WD repeat-contai 98.7 7.7E-06 2.6E-10 78.3 24.9 189 54-343 112-306 (401)
82 4ggc_A P55CDC, cell division c 98.7 1E-05 3.6E-10 73.9 24.6 149 205-370 162-314 (318)
83 1erj_A Transcriptional repress 98.7 1.2E-05 4.2E-10 76.9 25.8 221 54-369 144-387 (393)
84 1vyh_C Platelet-activating fac 98.6 6.8E-06 2.3E-10 79.3 23.6 216 54-368 171-408 (410)
85 4g56_B MGC81050 protein; prote 98.6 6.1E-07 2.1E-11 85.1 15.4 223 54-371 114-343 (357)
86 2oiz_A Aromatic amine dehydrog 98.6 2.5E-05 8.5E-10 74.2 26.6 278 2-379 36-342 (361)
87 1sq9_A Antiviral protein SKI8; 98.6 5.4E-06 1.8E-10 78.6 21.6 111 207-338 199-330 (397)
88 4gga_A P55CDC, cell division c 98.6 1.5E-05 5.1E-10 76.9 24.6 148 205-371 242-395 (420)
89 3mkq_A Coatomer beta'-subunit; 98.6 1.3E-05 4.3E-10 83.7 25.5 223 54-380 34-266 (814)
90 3k26_A Polycomb protein EED; W 98.6 1.5E-05 5E-10 74.2 23.4 223 54-369 94-364 (366)
91 1got_B GT-beta; complex (GTP-b 98.6 2.6E-05 8.9E-10 73.0 24.8 167 142-362 163-335 (340)
92 3vl1_A 26S proteasome regulato 98.5 1.6E-05 5.6E-10 75.9 23.1 197 54-331 160-366 (420)
93 1pgu_A Actin interacting prote 98.5 1.7E-05 5.8E-10 79.5 23.3 149 206-380 174-335 (615)
94 3fvz_A Peptidyl-glycine alpha- 98.5 9.5E-05 3.3E-09 68.9 26.9 233 54-369 68-320 (329)
95 1k8k_C P40, ARP2/3 complex 41 98.5 1.7E-05 6E-10 74.1 21.6 221 54-371 29-274 (372)
96 3iz6_a 40S ribosomal protein R 98.5 0.00023 7.8E-09 67.6 29.6 257 54-371 87-375 (380)
97 3g4e_A Regucalcin; six bladed 98.5 9.3E-05 3.2E-09 67.9 25.5 123 214-360 129-262 (297)
98 1got_B GT-beta; complex (GTP-b 98.5 4.9E-05 1.7E-09 71.0 23.8 222 54-380 76-308 (340)
99 4gga_A P55CDC, cell division c 98.5 2.4E-05 8.4E-10 75.4 22.2 226 54-380 124-360 (420)
100 1mda_H Methylamine dehydrogena 98.5 1E-05 3.5E-10 77.3 19.1 274 2-380 51-353 (368)
101 3hx6_A Type 4 fimbrial biogene 98.4 1.3E-05 4.5E-10 79.5 19.6 172 142-333 94-287 (570)
102 3sfz_A APAF-1, apoptotic pepti 98.4 9.4E-05 3.2E-09 81.1 28.3 252 54-380 764-1081(1249)
103 1vyh_C Platelet-activating fac 98.4 3.4E-05 1.1E-09 74.4 21.8 221 54-379 129-375 (410)
104 3odt_A Protein DOA1; ubiquitin 98.4 0.00016 5.3E-09 65.6 25.0 170 143-371 124-296 (313)
105 2pbi_B Guanine nucleotide-bind 98.4 0.0002 6.9E-09 67.4 26.4 169 142-362 175-349 (354)
106 1sq9_A Antiviral protein SKI8; 98.4 3.5E-05 1.2E-09 72.9 21.0 153 205-381 137-330 (397)
107 2oiz_A Aromatic amine dehydrog 98.4 8E-05 2.7E-09 70.7 23.2 256 31-381 15-303 (361)
108 4ggc_A P55CDC, cell division c 98.4 0.00013 4.4E-09 66.4 23.2 226 54-380 44-280 (318)
109 3mmy_A MRNA export factor; mRN 98.4 4.8E-05 1.6E-09 70.6 20.5 209 54-362 107-338 (368)
110 2vdu_B TRNA (guanine-N(7)-)-me 98.3 4.6E-05 1.6E-09 74.1 21.0 151 205-378 210-398 (450)
111 3e5z_A Putative gluconolactona 98.3 0.00027 9.3E-09 64.3 24.8 91 275-376 191-289 (296)
112 3sfz_A APAF-1, apoptotic pepti 98.3 0.00019 6.4E-09 78.8 27.6 223 54-378 636-876 (1249)
113 1rwi_B Serine/threonine-protei 98.3 0.00014 5E-09 64.8 21.8 138 208-370 121-263 (270)
114 2pm9_A Protein WEB1, protein t 98.3 0.00017 5.8E-09 68.4 23.0 144 142-333 187-340 (416)
115 4a11_B DNA excision repair pro 98.3 0.00032 1.1E-08 66.1 24.2 222 54-371 121-365 (408)
116 1k8k_C P40, ARP2/3 complex 41 98.3 6.7E-05 2.3E-09 70.0 19.2 181 54-330 73-274 (372)
117 4a11_B DNA excision repair pro 98.3 9.2E-05 3.2E-09 69.8 20.3 113 205-338 257-373 (408)
118 1erj_A Transcriptional repress 98.3 0.00025 8.4E-09 67.7 23.3 192 54-333 84-290 (393)
119 2vdu_B TRNA (guanine-N(7)-)-me 98.2 0.00023 7.8E-09 69.1 23.3 110 205-339 161-280 (450)
120 2z2n_A Virginiamycin B lyase; 98.2 0.00048 1.7E-08 62.0 23.7 140 207-375 153-297 (299)
121 3i2n_A WD repeat-containing pr 98.2 0.00013 4.5E-09 67.4 20.1 226 54-371 43-291 (357)
122 1ri6_A Putative isomerase YBHE 98.2 0.00033 1.1E-08 64.3 22.4 149 206-376 141-313 (343)
123 1pjx_A Dfpase, DIISOPROPYLFLUO 98.2 8.1E-05 2.8E-09 68.1 17.9 84 276-360 197-288 (314)
124 2zux_A YESW protein; beta-prop 98.2 0.00011 3.8E-09 72.5 19.5 113 143-296 292-410 (591)
125 4aow_A Guanine nucleotide-bind 98.2 0.00026 8.9E-09 65.0 21.1 219 54-368 60-283 (340)
126 3k26_A Polycomb protein EED; W 98.2 9.3E-05 3.2E-09 68.7 18.0 187 54-333 43-263 (366)
127 4gqb_B Methylosome protein 50; 98.2 0.00015 5.2E-09 68.2 19.6 178 54-330 148-331 (344)
128 2pbi_B Guanine nucleotide-bind 98.2 0.00071 2.4E-08 63.6 24.2 146 205-379 166-321 (354)
129 3scy_A Hypothetical bacterial 98.2 0.00055 1.9E-08 64.1 23.2 101 276-378 232-344 (361)
130 2zuy_A YESX protein; beta-prop 98.1 0.00021 7.1E-09 70.9 20.2 114 143-296 296-414 (620)
131 2pm9_A Protein WEB1, protein t 98.1 0.00014 4.8E-09 69.0 18.9 150 205-372 178-338 (416)
132 1yfq_A Cell cycle arrest prote 98.1 0.00027 9.2E-09 65.1 20.2 148 205-380 112-289 (342)
133 3scy_A Hypothetical bacterial 98.1 0.0011 3.7E-08 62.0 24.5 67 309-376 222-296 (361)
134 2dg1_A DRP35, lactonase; beta 98.1 0.0012 4E-08 60.9 24.3 123 214-361 161-301 (333)
135 2aq5_A Coronin-1A; WD40 repeat 98.1 0.0008 2.7E-08 64.0 23.7 146 205-371 144-299 (402)
136 1q7f_A NHL, brain tumor CG1071 98.1 0.0016 5.5E-08 58.6 24.4 186 143-380 51-244 (286)
137 1npe_A Nidogen, entactin; glyc 98.1 0.0026 8.9E-08 57.0 25.6 149 206-380 91-245 (267)
138 2aq5_A Coronin-1A; WD40 repeat 98.1 0.00026 8.9E-09 67.4 19.8 145 142-333 153-302 (402)
139 2qc5_A Streptogramin B lactona 98.1 0.0026 9E-08 57.1 25.6 129 206-360 115-249 (300)
140 3fvz_A Peptidyl-glycine alpha- 98.1 0.0026 8.9E-08 59.0 26.1 216 31-329 101-321 (329)
141 2p4o_A Hypothetical protein; p 98.1 0.00086 2.9E-08 61.7 22.3 133 207-362 129-280 (306)
142 3mmy_A MRNA export factor; mRN 98.1 0.00084 2.9E-08 62.0 22.4 224 54-380 63-311 (368)
143 1pgu_A Actin interacting prote 98.1 0.00046 1.6E-08 69.0 21.9 147 206-381 129-291 (615)
144 1fwx_A Nitrous oxide reductase 98.1 4.6E-05 1.6E-09 76.5 14.2 230 29-371 99-361 (595)
145 3gre_A Serine/threonine-protei 98.1 0.00082 2.8E-08 64.5 22.9 150 142-338 191-367 (437)
146 1ri6_A Putative isomerase YBHE 98.1 0.0012 4.2E-08 60.4 23.2 146 206-375 96-266 (343)
147 3v9f_A Two-component system se 98.0 0.00055 1.9E-08 71.6 22.8 155 194-375 364-526 (781)
148 2hqs_A Protein TOLB; TOLB, PAL 98.0 0.00031 1.1E-08 67.8 19.5 221 55-374 159-388 (415)
149 4aow_A Guanine nucleotide-bind 98.0 0.0012 4E-08 60.5 22.7 108 205-339 185-295 (340)
150 4g56_B MGC81050 protein; prote 98.0 0.00016 5.4E-09 68.2 17.0 148 205-378 151-306 (357)
151 3i2n_A WD repeat-containing pr 98.0 0.00013 4.6E-09 67.4 16.1 101 205-332 180-293 (357)
152 2qc5_A Streptogramin B lactona 98.0 0.0021 7.3E-08 57.7 23.9 126 208-359 159-290 (300)
153 3lrv_A PRE-mRNA-splicing facto 98.0 0.00079 2.7E-08 62.7 21.3 107 205-337 139-251 (343)
154 2ghs_A AGR_C_1268P; regucalcin 98.0 0.002 6.7E-08 59.9 23.8 121 214-361 160-293 (326)
155 1yfq_A Cell cycle arrest prote 98.0 0.00022 7.4E-09 65.7 17.2 138 208-368 163-321 (342)
156 3gre_A Serine/threonine-protei 98.0 0.001 3.6E-08 63.7 22.2 150 205-379 182-365 (437)
157 3frx_A Guanine nucleotide-bind 98.0 0.0024 8.2E-08 58.8 23.7 106 205-338 166-275 (319)
158 2z2n_A Virginiamycin B lyase; 98.0 0.0037 1.3E-07 56.0 24.3 128 206-359 110-243 (299)
159 2zux_A YESW protein; beta-prop 98.0 0.00044 1.5E-08 68.3 18.8 205 143-380 151-407 (591)
160 2zuy_A YESX protein; beta-prop 98.0 0.0046 1.6E-07 61.4 25.6 224 55-340 155-414 (620)
161 3frx_A Guanine nucleotide-bind 97.9 0.0011 3.9E-08 61.1 20.6 148 142-342 86-239 (319)
162 4asc_A Kelch repeat and BTB do 97.9 0.0084 2.9E-07 55.1 26.5 127 215-360 117-252 (315)
163 2fp8_A Strictosidine synthase; 97.9 0.0022 7.6E-08 59.2 22.6 129 214-370 164-312 (322)
164 3e5z_A Putative gluconolactona 97.9 0.0025 8.7E-08 57.7 22.5 99 206-334 184-290 (296)
165 4asc_A Kelch repeat and BTB do 97.9 0.0032 1.1E-07 57.9 23.5 125 215-359 165-305 (315)
166 3ei3_B DNA damage-binding prot 97.9 0.0017 5.9E-08 61.0 21.8 219 54-370 140-381 (383)
167 3elq_A Arylsulfate sulfotransf 97.9 0.0035 1.2E-07 62.5 24.5 62 279-340 472-550 (571)
168 3dm0_A Maltose-binding peripla 97.9 0.00041 1.4E-08 71.4 18.7 180 142-378 451-637 (694)
169 3pe7_A Oligogalacturonate lyas 97.9 0.0012 4.1E-08 62.0 20.4 94 278-372 265-383 (388)
170 3hrp_A Uncharacterized protein 97.9 0.0076 2.6E-07 58.0 26.2 141 205-362 230-401 (409)
171 4a2l_A BT_4663, two-component 97.9 0.0015 5E-08 68.5 22.7 143 205-375 416-573 (795)
172 2ymu_A WD-40 repeat protein; u 97.9 0.0074 2.5E-07 59.8 26.9 143 206-380 398-545 (577)
173 4e54_B DNA damage-binding prot 97.9 0.0071 2.4E-07 58.2 25.7 223 54-371 186-430 (435)
174 3f3f_A Nucleoporin SEH1; struc 97.9 0.0027 9.3E-08 57.7 21.3 108 205-331 124-250 (351)
175 1nr0_A Actin interacting prote 97.9 0.0032 1.1E-07 63.7 23.7 191 54-336 169-361 (611)
176 3elq_A Arylsulfate sulfotransf 97.9 0.009 3.1E-07 59.6 26.1 60 322-381 471-548 (571)
177 3g4e_A Regucalcin; six bladed 97.8 0.00078 2.7E-08 61.6 17.3 160 208-381 67-237 (297)
178 1mda_H Methylamine dehydrogena 97.8 0.00081 2.8E-08 64.1 17.7 249 29-379 29-309 (368)
179 3hfq_A Uncharacterized protein 97.8 0.0041 1.4E-07 57.6 22.2 93 276-370 161-270 (347)
180 1npe_A Nidogen, entactin; glyc 97.8 0.013 4.4E-07 52.3 24.6 111 206-341 134-249 (267)
181 3v9f_A Two-component system se 97.8 0.002 6.7E-08 67.4 21.6 146 205-375 460-613 (781)
182 4a2l_A BT_4663, two-component 97.8 0.0021 7.1E-08 67.4 21.7 155 194-374 358-527 (795)
183 3dm0_A Maltose-binding peripla 97.8 0.0061 2.1E-07 62.6 24.9 188 54-339 451-641 (694)
184 2ojh_A Uncharacterized protein 97.8 0.012 4.1E-07 52.1 23.5 107 206-335 142-263 (297)
185 3jrp_A Fusion protein of prote 97.7 0.0024 8.1E-08 59.3 19.3 143 205-370 115-286 (379)
186 3vu4_A KMHSV2; beta-propeller 97.7 0.0026 9E-08 59.6 19.6 169 143-372 81-272 (355)
187 2hqs_A Protein TOLB; TOLB, PAL 97.7 0.0076 2.6E-07 57.9 23.2 195 55-349 203-405 (415)
188 2vpj_A Kelch-like protein 12; 97.7 0.025 8.6E-07 51.3 27.0 140 215-374 128-279 (301)
189 3v65_B Low-density lipoprotein 97.7 0.017 5.9E-07 55.0 25.3 146 206-377 171-322 (386)
190 2ymu_A WD-40 repeat protein; u 97.7 0.0067 2.3E-07 60.2 22.9 129 205-362 438-572 (577)
191 1nr0_A Actin interacting prote 97.7 0.015 5E-07 58.8 25.4 146 205-370 202-354 (611)
192 1jof_A Carboxy-CIS,CIS-muconat 97.7 0.019 6.7E-07 53.7 24.3 148 206-372 157-342 (365)
193 3iz6_a 40S ribosomal protein R 97.6 0.0075 2.6E-07 56.9 21.4 109 205-332 261-377 (380)
194 3dwl_C Actin-related protein 2 97.6 0.00021 7.2E-09 67.1 10.4 142 205-370 112-280 (377)
195 2vpj_A Kelch-like protein 12; 97.6 0.037 1.3E-06 50.2 27.8 103 215-337 175-283 (301)
196 3pe7_A Oligogalacturonate lyas 97.6 0.01 3.4E-07 55.6 21.3 61 56-162 61-121 (388)
197 3lrv_A PRE-mRNA-splicing facto 97.6 0.0038 1.3E-07 58.0 18.1 183 142-371 57-244 (343)
198 2ece_A 462AA long hypothetical 97.6 0.0018 6.3E-08 62.9 15.9 192 141-374 162-428 (462)
199 3jrp_A Fusion protein of prote 97.6 0.0039 1.3E-07 57.8 17.7 108 205-332 172-289 (379)
200 3ott_A Two-component system se 97.6 0.0066 2.2E-07 63.1 21.1 132 205-362 482-619 (758)
201 3v64_C Agrin; beta propeller, 97.5 0.057 2E-06 50.6 26.3 146 206-377 128-279 (349)
202 3ei3_B DNA damage-binding prot 97.5 0.0094 3.2E-07 55.8 20.2 175 143-371 96-282 (383)
203 1zgk_A Kelch-like ECH-associat 97.5 0.05 1.7E-06 49.6 25.6 126 215-360 137-271 (308)
204 2ecf_A Dipeptidyl peptidase IV 97.5 0.0051 1.7E-07 63.3 19.8 137 216-371 264-413 (741)
205 2p9w_A MAL S 1 allergenic prot 97.5 0.0092 3.1E-07 55.6 19.3 175 142-360 99-304 (334)
206 2xn4_A Kelch-like protein 2; s 97.5 0.05 1.7E-06 49.3 27.2 103 215-337 173-281 (302)
207 2fp8_A Strictosidine synthase; 97.5 0.0061 2.1E-07 56.2 18.2 164 206-381 92-276 (322)
208 2ojh_A Uncharacterized protein 97.5 0.012 4.2E-07 52.0 19.6 55 54-156 21-76 (297)
209 2woz_A Kelch repeat and BTB do 97.5 0.041 1.4E-06 50.4 23.7 123 215-357 175-313 (318)
210 2xyi_A Probable histone-bindin 97.5 0.009 3.1E-07 57.4 19.9 101 205-330 244-353 (430)
211 2xzm_R RACK1; ribosome, transl 97.5 0.027 9.2E-07 52.1 22.5 173 142-371 97-285 (343)
212 2xdw_A Prolyl endopeptidase; a 97.5 0.039 1.3E-06 56.8 25.5 102 276-377 258-372 (710)
213 3ii7_A Kelch-like protein 7; p 97.5 0.06 2.1E-06 48.9 27.5 103 215-337 169-277 (306)
214 1ijq_A LDL receptor, low-densi 97.5 0.066 2.3E-06 49.3 26.2 145 206-376 89-241 (316)
215 1jof_A Carboxy-CIS,CIS-muconat 97.4 0.017 5.8E-07 54.1 20.5 146 213-377 117-296 (365)
216 2z3z_A Dipeptidyl aminopeptida 97.4 0.013 4.5E-07 59.9 21.4 145 213-375 233-393 (706)
217 3dr2_A Exported gluconolactona 97.4 0.033 1.1E-06 50.7 22.0 123 215-360 169-297 (305)
218 3dw8_B Serine/threonine-protei 97.4 0.027 9.2E-07 53.6 22.2 116 205-341 189-327 (447)
219 3f3f_A Nucleoporin SEH1; struc 97.4 0.011 3.9E-07 53.5 18.6 24 205-228 182-205 (351)
220 3c5m_A Oligogalacturonate lyas 97.4 0.0073 2.5E-07 56.5 17.7 97 277-377 264-388 (396)
221 2ghs_A AGR_C_1268P; regucalcin 97.4 0.0061 2.1E-07 56.5 16.9 155 205-380 100-266 (326)
222 3p5b_L Low density lipoprotein 97.4 0.11 3.8E-06 49.6 26.1 147 206-378 172-325 (400)
223 2z3z_A Dipeptidyl aminopeptida 97.4 0.018 6E-07 58.9 21.2 19 141-159 233-251 (706)
224 2ecf_A Dipeptidyl peptidase IV 97.3 0.017 5.8E-07 59.4 21.0 93 278-371 264-367 (741)
225 4h5i_A Guanine nucleotide-exch 97.3 0.031 1.1E-06 52.5 21.1 179 142-370 156-342 (365)
226 1pjx_A Dfpase, DIISOPROPYLFLUO 97.3 0.015 5E-07 52.7 17.7 102 207-330 189-299 (314)
227 3jro_A Fusion protein of prote 97.3 0.0052 1.8E-07 63.9 16.3 147 205-371 113-285 (753)
228 2xn4_A Kelch-like protein 2; s 97.3 0.11 3.6E-06 47.1 28.4 128 215-360 124-260 (302)
229 2xdw_A Prolyl endopeptidase; a 97.3 0.049 1.7E-06 56.0 23.1 145 214-375 258-416 (710)
230 3c5m_A Oligogalacturonate lyas 97.2 0.086 2.9E-06 49.0 22.8 124 213-357 166-299 (396)
231 2dg1_A DRP35, lactonase; beta 97.2 0.04 1.4E-06 50.4 19.9 146 215-380 112-269 (333)
232 2xzm_R RACK1; ribosome, transl 97.2 0.11 3.8E-06 47.8 22.8 102 206-335 185-290 (343)
233 1fwx_A Nitrous oxide reductase 97.2 0.019 6.6E-07 57.6 18.2 92 2-109 117-215 (595)
234 3hrp_A Uncharacterized protein 97.2 0.053 1.8E-06 52.0 21.0 149 205-376 182-357 (409)
235 1xfd_A DIP, dipeptidyl aminope 97.2 0.093 3.2E-06 53.5 24.1 97 276-373 279-395 (723)
236 2ece_A 462AA long hypothetical 97.2 0.12 4E-06 50.2 22.9 151 215-370 164-351 (462)
237 2uvk_A YJHT; unknown function, 97.1 0.17 5.7E-06 47.0 27.1 147 215-376 168-345 (357)
238 3dw8_B Serine/threonine-protei 97.1 0.049 1.7E-06 51.8 20.1 110 206-335 240-378 (447)
239 3ott_A Two-component system se 97.1 0.064 2.2E-06 55.6 22.3 154 195-376 421-589 (758)
240 2oaj_A Protein SNI1; WD40 repe 97.1 0.049 1.7E-06 57.9 21.3 143 142-336 78-248 (902)
241 3m0c_C LDL receptor, low-densi 97.1 0.19 6.5E-06 52.6 25.2 145 206-376 484-635 (791)
242 2xyi_A Probable histone-bindin 97.0 0.061 2.1E-06 51.5 20.2 146 206-371 195-353 (430)
243 4e54_B DNA damage-binding prot 97.0 0.036 1.2E-06 53.1 18.5 122 205-333 308-433 (435)
244 1rwi_B Serine/threonine-protei 97.0 0.027 9.3E-07 49.7 16.2 131 207-361 79-212 (270)
245 3dr2_A Exported gluconolactona 97.0 0.017 5.6E-07 52.8 15.1 161 208-381 99-274 (305)
246 4h5i_A Guanine nucleotide-exch 97.0 0.061 2.1E-06 50.4 19.4 52 274-329 288-342 (365)
247 2bkl_A Prolyl endopeptidase; m 97.0 0.089 3E-06 53.9 22.0 134 216-370 203-348 (695)
248 2uvk_A YJHT; unknown function, 97.0 0.23 8E-06 46.0 24.0 123 215-340 217-352 (357)
249 4gq1_A NUP37; propeller, trans 96.9 0.16 5.6E-06 47.9 21.9 61 142-232 165-226 (393)
250 2qe8_A Uncharacterized protein 96.9 0.095 3.3E-06 48.6 19.9 56 305-361 253-311 (343)
251 3vu4_A KMHSV2; beta-propeller 96.9 0.075 2.6E-06 49.5 18.7 145 206-381 72-235 (355)
252 3v65_B Low-density lipoprotein 96.9 0.32 1.1E-05 46.0 27.0 111 206-340 214-328 (386)
253 3sov_A LRP-6, low-density lipo 96.9 0.28 9.4E-06 45.3 23.9 145 206-377 91-242 (318)
254 1n7d_A LDL receptor, low-densi 96.9 0.069 2.4E-06 55.1 19.7 74 249-339 550-623 (699)
255 3ii7_A Kelch-like protein 7; p 96.8 0.26 8.8E-06 44.6 28.2 130 215-360 118-256 (306)
256 4hw6_A Hypothetical protein, I 96.8 0.26 9E-06 47.6 22.5 135 206-362 240-424 (433)
257 1n7d_A LDL receptor, low-densi 96.8 0.016 5.6E-07 59.8 14.4 145 207-377 466-618 (699)
258 1zgk_A Kelch-like ECH-associat 96.8 0.3 1E-05 44.4 26.4 103 215-337 184-292 (308)
259 3o4h_A Acylamino-acid-releasin 96.8 0.037 1.3E-06 55.2 16.6 145 197-369 116-274 (582)
260 2zwa_A Leucine carboxyl methyl 96.8 0.43 1.5E-05 49.1 24.8 144 206-362 502-676 (695)
261 3jro_A Fusion protein of prote 96.8 0.011 3.8E-07 61.4 13.0 107 205-331 170-286 (753)
262 2woz_A Kelch repeat and BTB do 96.7 0.35 1.2E-05 44.1 28.6 127 215-360 127-262 (318)
263 3dwl_C Actin-related protein 2 96.7 0.008 2.7E-07 56.0 10.3 21 205-225 158-178 (377)
264 3amr_A 3-phytase; beta-propell 96.7 0.16 5.5E-06 47.6 18.9 101 276-382 152-273 (355)
265 2w18_A PALB2, fancn, partner a 96.6 0.44 1.5E-05 44.6 21.8 155 205-368 193-354 (356)
266 3v64_C Agrin; beta propeller, 96.6 0.44 1.5E-05 44.4 27.5 110 206-339 171-284 (349)
267 1z68_A Fibroblast activation p 96.6 0.07 2.4E-06 54.6 17.9 55 54-156 89-143 (719)
268 2gop_A Trilobed protease; beta 96.6 0.11 3.8E-06 47.5 17.8 136 214-376 151-294 (347)
269 1k3i_A Galactose oxidase precu 96.6 0.17 6E-06 51.5 20.6 79 278-360 433-530 (656)
270 3azo_A Aminopeptidase; POP fam 96.6 0.053 1.8E-06 54.9 16.2 98 278-377 266-373 (662)
271 2oaj_A Protein SNI1; WD40 repe 96.6 0.11 3.8E-06 55.1 19.3 108 206-339 70-191 (902)
272 1xfd_A DIP, dipeptidyl aminope 96.5 0.075 2.6E-06 54.2 17.2 68 54-155 36-103 (723)
273 3m0c_C LDL receptor, low-densi 96.5 1 3.4E-05 47.1 28.2 110 206-338 526-640 (791)
274 2p9w_A MAL S 1 allergenic prot 96.4 0.31 1.1E-05 45.3 18.7 126 214-358 99-252 (334)
275 3o4h_A Acylamino-acid-releasin 96.4 0.21 7.2E-06 49.7 18.9 135 206-372 162-314 (582)
276 2w18_A PALB2, fancn, partner a 96.3 0.72 2.5E-05 43.2 22.7 151 142-328 202-355 (356)
277 3azo_A Aminopeptidase; POP fam 96.3 0.25 8.4E-06 49.9 19.3 144 215-375 161-327 (662)
278 1yr2_A Prolyl oligopeptidase; 96.3 1.2 4.1E-05 45.8 24.8 96 276-371 293-393 (741)
279 3fm0_A Protein CIAO1; WDR39,SG 96.3 0.51 1.8E-05 43.4 19.9 23 205-227 117-139 (345)
280 3tc9_A Hypothetical hydrolase; 96.2 0.41 1.4E-05 46.1 19.4 51 310-362 352-421 (430)
281 2hes_X YDR267CP; beta-propelle 96.2 0.71 2.4E-05 42.1 20.2 104 205-332 165-282 (330)
282 2pm7_B Protein transport prote 96.1 0.39 1.3E-05 43.1 18.0 22 205-226 67-88 (297)
283 1ijq_A LDL receptor, low-densi 96.1 0.78 2.7E-05 41.9 28.8 111 206-338 132-246 (316)
284 2p4o_A Hypothetical protein; p 96.1 0.12 4.2E-06 47.0 14.5 141 208-370 45-197 (306)
285 4a0p_A LRP6, LRP-6, low-densit 96.0 1.5 5.2E-05 44.4 26.0 144 206-376 93-240 (628)
286 1k32_A Tricorn protease; prote 96.0 0.56 1.9E-05 50.4 21.4 128 206-359 349-491 (1045)
287 4a5s_A Dipeptidyl peptidase 4 96.0 0.54 1.9E-05 48.4 20.5 82 277-360 285-383 (740)
288 2hes_X YDR267CP; beta-propelle 96.0 0.75 2.6E-05 41.9 19.5 20 205-224 119-138 (330)
289 2pm7_B Protein transport prote 95.7 1.1 3.6E-05 40.1 19.7 94 275-371 178-285 (297)
290 3p5b_L Low density lipoprotein 95.7 1.5 5E-05 41.7 27.3 74 249-340 256-330 (400)
291 3iuj_A Prolyl endopeptidase; h 95.7 2.1 7.3E-05 43.6 25.5 84 277-361 259-347 (693)
292 3fm0_A Protein CIAO1; WDR39,SG 95.5 0.66 2.3E-05 42.6 17.1 106 205-334 73-185 (345)
293 3bg1_A Protein SEC13 homolog; 95.4 1.4 4.8E-05 39.8 18.8 21 205-225 117-137 (316)
294 1k3i_A Galactose oxidase precu 95.3 1.8 6.1E-05 43.9 21.0 133 215-360 314-475 (656)
295 1z68_A Fibroblast activation p 95.3 0.021 7.3E-07 58.5 6.6 69 54-156 35-103 (719)
296 3qqz_A Putative uncharacterize 95.3 1.5 5E-05 39.1 23.1 186 94-360 32-243 (255)
297 2j04_A TAU60, YPL007P, hypothe 95.3 2.7 9.3E-05 42.0 22.8 110 205-338 141-263 (588)
298 2j04_B YDR362CP, TAU91; beta p 95.0 0.54 1.9E-05 46.5 15.4 141 206-369 278-426 (524)
299 2bkl_A Prolyl endopeptidase; m 94.9 3.8 0.00013 41.6 22.3 99 276-376 294-400 (695)
300 1k32_A Tricorn protease; prote 94.6 4.1 0.00014 43.6 22.3 54 25-107 18-71 (1045)
301 3sre_A PON1, serum paraoxonase 94.5 3.1 0.0001 38.9 18.8 95 249-362 231-349 (355)
302 3s94_A LRP-6, low-density lipo 94.2 5 0.00017 40.5 20.6 146 205-376 96-246 (619)
303 4a5s_A Dipeptidyl peptidase 4 94.2 3.7 0.00013 42.1 20.1 111 54-228 35-145 (740)
304 3sov_A LRP-6, low-density lipo 94.2 3.3 0.00011 37.8 27.8 112 205-340 133-248 (318)
305 4hw6_A Hypothetical protein, I 94.1 0.9 3.1E-05 43.7 14.4 149 206-375 153-308 (433)
306 1yr2_A Prolyl oligopeptidase; 93.8 6.8 0.00023 40.1 24.4 145 214-376 293-444 (741)
307 3bg1_A Protein SEC13 homolog; 93.7 2.2 7.4E-05 38.5 15.5 22 205-226 71-92 (316)
308 3amr_A 3-phytase; beta-propell 93.7 4.6 0.00016 37.7 18.8 111 207-341 145-275 (355)
309 4gq1_A NUP37; propeller, trans 93.4 3.1 0.00011 38.8 16.6 27 205-231 267-293 (393)
310 3tc9_A Hypothetical hydrolase; 93.2 1.4 4.9E-05 42.2 13.9 149 205-374 149-304 (430)
311 2qe8_A Uncharacterized protein 92.7 0.95 3.3E-05 41.7 11.6 69 306-376 73-157 (343)
312 2xe4_A Oligopeptidase B; hydro 92.6 11 0.00036 38.9 23.0 92 276-370 294-397 (751)
313 2gop_A Trilobed protease; beta 92.2 6.3 0.00022 35.4 18.2 86 276-370 243-330 (347)
314 2j04_B YDR362CP, TAU91; beta p 91.2 3.5 0.00012 40.6 14.3 100 206-329 324-427 (524)
315 3iuj_A Prolyl endopeptidase; h 91.2 14 0.00048 37.4 25.9 141 215-376 259-408 (693)
316 3kya_A Putative phosphatase; s 90.0 1.4 4.9E-05 43.2 9.9 154 205-374 151-344 (496)
317 4a0p_A LRP6, LRP-6, low-densit 89.8 18 0.00061 36.4 27.3 69 249-337 176-244 (628)
318 3kya_A Putative phosphatase; s 89.8 16 0.00054 35.7 23.1 26 309-336 390-415 (496)
319 3mez_B Mannose-specific lectin 89.6 5 0.00017 30.6 11.0 20 54-73 33-52 (113)
320 3s94_A LRP-6, low-density lipo 89.1 20 0.00069 36.0 23.5 68 304-375 483-553 (619)
321 2zwa_A Leucine carboxyl methyl 89.1 7.6 0.00026 39.7 15.1 130 215-360 412-559 (695)
322 3s25_A Hypothetical 7-bladed b 87.8 15 0.00052 33.1 22.2 130 214-374 87-217 (302)
323 3s25_A Hypothetical 7-bladed b 87.1 17 0.00057 32.8 24.0 122 205-357 115-240 (302)
324 2oit_A Nucleoporin 214KDA; NH2 83.8 30 0.001 32.7 19.7 27 205-232 204-230 (434)
325 2oit_A Nucleoporin 214KDA; NH2 83.3 8.2 0.00028 36.7 11.2 60 275-339 170-231 (434)
326 3a9g_A Putative uncharacterize 82.5 24 0.00081 32.5 13.7 138 205-359 39-216 (354)
327 3qqz_A Putative uncharacterize 82.5 25 0.00086 30.9 18.8 30 31-74 38-67 (255)
328 3mez_B Mannose-specific lectin 79.6 18 0.00061 27.4 9.8 22 211-233 63-84 (113)
329 1xd5_A Gastrodianin-1, antifun 78.9 12 0.00042 28.2 8.6 18 54-73 28-45 (112)
330 1tl2_A L10, protein (tachylect 78.7 8.4 0.00029 33.5 8.3 57 274-337 143-207 (236)
331 3a0c_A Mannose/sialic acid-bin 77.9 14 0.00049 27.7 8.7 18 54-73 29-46 (110)
332 3q6k_A 43.2 kDa salivary prote 77.5 6.5 0.00022 37.0 7.9 61 276-338 122-197 (381)
333 1cru_A Protein (soluble quinop 77.5 14 0.00048 35.5 10.6 84 277-360 48-163 (454)
334 3dzw_A Agglutinin; lectin, man 77.2 17 0.00057 27.3 8.9 18 54-73 28-45 (109)
335 3a9g_A Putative uncharacterize 77.1 29 0.00098 32.0 12.3 93 249-360 38-154 (354)
336 1xd5_A Gastrodianin-1, antifun 76.9 21 0.00073 26.8 10.5 21 211-233 56-76 (112)
337 2xzh_A Clathrin heavy chain 1; 72.5 20 0.0007 33.1 9.6 58 204-291 270-327 (365)
338 3a0c_A Mannose/sialic acid-bin 71.6 29 0.001 26.0 9.8 22 211-233 57-78 (110)
339 1tl2_A L10, protein (tachylect 71.6 34 0.0012 29.7 10.3 15 319-335 144-158 (236)
340 2ism_A Putative oxidoreductase 71.4 61 0.0021 29.6 14.9 110 207-329 43-177 (352)
341 3m7h_A Putidacin L1; monocot m 70.2 58 0.002 28.9 12.1 51 276-340 173-223 (276)
342 4h3o_A Lectin; cadmium, plant 68.9 33 0.0011 25.5 9.6 23 210-233 56-78 (105)
343 4h3o_A Lectin; cadmium, plant 68.6 33 0.0011 25.4 11.2 19 142-161 60-78 (105)
344 1b2p_A Protein (lectin); manno 67.0 40 0.0014 25.7 9.5 17 143-160 71-87 (119)
345 2xzh_A Clathrin heavy chain 1; 65.5 86 0.0029 29.0 19.1 53 309-363 271-325 (365)
346 1cru_A Protein (soluble quinop 64.8 74 0.0025 30.4 12.5 108 206-317 38-162 (454)
347 2j04_A TAU60, YPL007P, hypothe 64.2 1.2E+02 0.0041 30.2 23.5 141 205-370 97-253 (588)
348 1bpo_A Protein (clathrin); cla 64.2 41 0.0014 32.4 10.1 74 184-290 252-325 (494)
349 3r0e_B Lectin; carbohydrate bi 63.2 35 0.0012 25.6 7.9 18 143-161 64-81 (110)
350 2xe4_A Oligopeptidase B; hydro 62.3 1.4E+02 0.0048 30.4 23.9 146 214-376 294-461 (751)
351 2jxw_A WW domain-binding prote 59.6 38 0.0013 23.5 6.9 62 212-294 12-73 (75)
352 2dpf_A Curculin; sweet taste, 57.8 57 0.002 24.4 10.4 17 143-160 61-77 (115)
353 2jxw_A WW domain-binding prote 56.9 23 0.00077 24.7 5.3 60 276-338 14-73 (75)
354 1b2p_A Protein (lectin); manno 52.9 72 0.0025 24.1 10.4 22 211-233 67-88 (119)
355 3das_A Putative oxidoreductase 52.9 1.4E+02 0.0047 27.4 14.8 109 207-329 44-182 (347)
356 3das_A Putative oxidoreductase 47.0 87 0.003 28.8 9.2 85 276-360 52-159 (347)
357 3dzw_A Agglutinin; lectin, man 44.9 92 0.0031 23.0 8.4 86 206-338 20-105 (109)
358 3r0e_B Lectin; carbohydrate bi 35.2 1.3E+02 0.0046 22.2 8.5 22 211-233 60-81 (110)
359 3sre_A PON1, serum paraoxonase 34.5 2.7E+02 0.0093 25.5 19.8 155 216-380 142-307 (355)
360 2l5f_A PRE-mRNA-processing fac 33.8 35 0.0012 24.8 3.4 62 212-294 21-82 (92)
361 1xi4_A Clathrin heavy chain; a 33.5 5.6E+02 0.019 28.8 17.6 31 309-341 270-300 (1630)
362 3ei3_A DNA damage-binding prot 33.4 4.9E+02 0.017 28.1 14.9 147 214-374 806-958 (1158)
363 1xip_A Nucleoporin NUP159; bet 30.7 3.3E+02 0.011 25.2 11.1 124 205-362 49-183 (388)
364 2ism_A Putative oxidoreductase 30.6 3E+02 0.01 24.7 20.4 17 346-362 272-288 (352)
365 1tk7_A CG4244-PB; WW domain, n 30.2 82 0.0028 22.5 4.8 64 213-294 23-86 (88)
366 3s9j_A Member of DUF4221 famil 29.4 1.7E+02 0.0057 27.1 8.1 82 275-358 48-149 (369)
367 2dpf_A Curculin; sweet taste, 28.6 1.8E+02 0.0061 21.5 9.2 53 211-295 26-78 (115)
368 1xi4_A Clathrin heavy chain; a 28.5 81 0.0028 35.2 6.3 59 204-292 269-327 (1630)
369 1xip_A Nucleoporin NUP159; bet 27.4 3.7E+02 0.013 24.8 14.3 59 208-293 139-200 (388)
370 2l5f_A PRE-mRNA-processing fac 27.3 22 0.00076 25.9 1.3 60 276-338 23-82 (92)
371 3ei3_A DNA damage-binding prot 25.4 6.6E+02 0.023 27.0 19.0 173 141-363 805-992 (1158)
372 3q6k_A 43.2 kDa salivary prote 24.1 4.3E+02 0.015 24.4 24.7 67 142-232 122-197 (381)
373 3mez_A Mannose-specific lectin 20.7 2.6E+02 0.0088 20.6 10.6 17 54-73 29-45 (111)
374 1o6w_A PRP40, PRE-mRNA process 20.1 63 0.0022 22.2 2.5 61 142-233 11-71 (75)
No 1
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=100.00 E-value=7.5e-35 Score=297.31 Aligned_cols=335 Identities=22% Similarity=0.334 Sum_probs=245.0
Q ss_pred CCcCCCCceeeeeecCcC-ccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCC
Q 040693 1 AVKRSNGKLVWKTKLDDH-ARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFG 79 (382)
Q Consensus 1 ald~~tGk~~W~~~~~~~-~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~ 79 (382)
|||++|||++|++++... ....+.++|++.+++||++....+.+. ++.|+|||++||+++|+++..+....
T Consensus 135 AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~--------~g~v~A~D~~TG~~~W~~~~~~~~~~ 206 (599)
T 1w6s_A 135 ALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGV--------RGYLTAYDVKTGEQVWRAYATGPDKD 206 (599)
T ss_dssp EEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTC--------CCEEEEEETTTCCEEEEEESSSCHHH
T ss_pred EEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCC--------CCeEEEEECCCCcEEEEEcCCCCccc
Confidence 689999999999987542 123577899999999999886544332 78999999999999999997543200
Q ss_pred --------------------------CCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 80 --------------------------KLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 80 --------------------------~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
......++++|. .+++|+..++||+++++...+. ..
T Consensus 207 ~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~-~~a~d~~~g~vy~g~g~~~p~~-----------------~~ 268 (599)
T 1w6s_A 207 LLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWG-WYAYDPGTNLIYFGTGNPAPWN-----------------ET 268 (599)
T ss_dssp HTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCS-CCEEETTTTEEEEECCCCSCSC-----------------GG
T ss_pred cccccccccccccccccccccccCCCcceecCCCcccc-ceeEeCCCCEEEEeCCCCcccc-----------------Cc
Confidence 001124667786 6899999999999998742211 11
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEee-eCceeecEEEEEc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMY-RNKVKHDIVVAVQ 212 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~g~~~~~v~~~~ 212 (382)
.|..++.+.+.|+|||++||+++|+++....+.| +++..++|++.+.. .+|.....++.++
T Consensus 269 ~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~w------------------d~d~~~~p~l~d~~~~~G~~~~~v~~~~ 330 (599)
T 1w6s_A 269 MRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEW------------------DYAGVNVMMLSEQKDKDGKARKLLTHPD 330 (599)
T ss_dssp GSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSS------------------CCCCCCCCEEEEEECTTSCEEEEEEEEC
T ss_pred ccCCCccccceEEEEeCCCCceeeEeecCCCccc------------------cccCCCccEEEeccccCCcEEEEEEEEC
Confidence 2233455668999999999999999999988877 44566899998764 4554446788899
Q ss_pred cCcEEEEEeCCCCCeeeeeccCCC---------------------------------CCCCCcccceee---eCCeEEEE
Q 040693 213 KSGFAWALDRDSGSLIWSMEAGPG---------------------------------GLGGGAMWGAAT---DERRIYTN 256 (382)
Q Consensus 213 ~~g~l~ald~~tG~~~W~~~~~~~---------------------------------~~~g~~~~~~~~---~~~~v~~~ 256 (382)
.+|.+++||++||+++|+.+..+. ...|...|+++. +.+++|+.
T Consensus 331 ~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~ 410 (599)
T 1w6s_A 331 RNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMG 410 (599)
T ss_dssp TTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEE
T ss_pred CCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEe
Confidence 999999999999999999875420 123444555443 46788887
Q ss_pred ecCcc------------ccccc-----cC--CCC-C--CCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEE
Q 040693 257 IANSQ------------HKNFN-----LK--PSK-N--STIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFG 314 (382)
Q Consensus 257 ~~~~~------------~~~~~-----~~--~~~-~--~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~ 314 (382)
..+.. +..+. +. |.. . ....+.|+|+|++|||++|+.+.+. ....+++...+++||+
T Consensus 411 ~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagg~vf~ 489 (599)
T 1w6s_A 411 INHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF-AVWGGTMATAGDLVFY 489 (599)
T ss_dssp EECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEE
T ss_pred ccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC-CccCcceEecCCEEEE
Confidence 54311 11111 11 111 0 0135889999999999999998654 3456778788999999
Q ss_pred eeecCCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeCceeEe--e--c---C----------------Cc
Q 040693 315 GSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNGYKVTV--G--F---G----------------NK 369 (382)
Q Consensus 315 ~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~g~~~--~--~---~----------------~~ 369 (382)
++. ++.|+|||++||+++|+++++.++.++|++ .+|++||....|.-. + + + ..
T Consensus 490 gt~--dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (599)
T 1w6s_A 490 GTL--DGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIYYGVGGWPGVGLVFDLADPTAGLGAVGAFKKLAN 567 (599)
T ss_dssp ECT--TSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCTTTTHHHHHTCCCTTCGGGHHHHTTTGGG
T ss_pred ECC--CCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEEccCCccccccccccccccccccccccccccccc
Confidence 884 999999999999999999999999999998 899999987766311 0 0 0 11
Q ss_pred cCCCCCeEEEEEC
Q 040693 370 NFTSGTSLYAFCV 382 (382)
Q Consensus 370 ~~~~g~~l~~~~~ 382 (382)
.++.|..|++|.|
T Consensus 568 ~~~~g~~~~~f~l 580 (599)
T 1w6s_A 568 YTQMGGGVVVFSL 580 (599)
T ss_dssp TCCCCCEEEEEEE
T ss_pred ccCCCCEEEEEEc
Confidence 2577999999986
No 2
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=100.00 E-value=2e-34 Score=294.20 Aligned_cols=342 Identities=23% Similarity=0.379 Sum_probs=242.4
Q ss_pred CCcCCCCceeeeeecCcCc-cceeeeceEEEcC------EEEEeccCccccccccccccccceEEEEeCccCceeeeeec
Q 040693 1 AVKRSNGKLVWKTKLDDHA-RSFITMSGTYYKG------AYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFM 73 (382)
Q Consensus 1 ald~~tGk~~W~~~~~~~~-~~~~~~~p~v~~~------~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~ 73 (382)
|||++|||++|++++.... ...+.++|++.++ +||++....+++. ++.|+|||++||+++|+.+.
T Consensus 131 AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~--------~g~v~alD~~tG~~~W~~~~ 202 (582)
T 1flg_A 131 ALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGV--------VGRLFARDPDTGEEIWMRPF 202 (582)
T ss_dssp EEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCC--------BCEEEEECTTTCCEEEEEES
T ss_pred EEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCC--------CCEEEEEECCCCCEEeecCC
Confidence 6899999999999986422 2346789999999 9999876544332 78999999999999999865
Q ss_pred cCCCC--------------C-C--------------CCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhccccc
Q 040693 74 LPDNF--------------G-K--------------LNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEEN 124 (382)
Q Consensus 74 ~~~~~--------------~-~--------------~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~ 124 (382)
..... . . .....|+..|. ++++|++.++||+++++...+...
T Consensus 203 ~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~-~~a~d~~~g~vyv~~gn~~~~~~~-------- 273 (582)
T 1flg_A 203 VEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQ-SASFDAETNTIIVGAGNPGPWNTW-------- 273 (582)
T ss_dssp STTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCS-CCEEETTTTEEEEEECCBSSSCGG--------
T ss_pred CccccccccCcccccccccccccCCCccccccccccccccCCccccC-CceEcCCCCEEEEeCCCCCcccCc--------
Confidence 31100 0 0 01124777885 699999999999999874211100
Q ss_pred CCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEee-eCce
Q 040693 125 NQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMY-RNKV 203 (382)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~g~ 203 (382)
.++.+. ...++.++.+.+.|+|||++||+++|+++....+.|. ++..++|++.+.. .+|.
T Consensus 274 ~r~~~g-g~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd------------------~~~~~~p~l~~~~~~~G~ 334 (582)
T 1flg_A 274 ARTAKG-GNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWD------------------FSGNNELVLFDYKAKDGK 334 (582)
T ss_dssp GGSCTT-SCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSC------------------CCCCCCCEEEEEECSSSC
T ss_pred ccccCC-CcccccCCcccceEEEEeCCCCCEEEEEeCCCCCccc------------------ccCCCCcEEEeeecCCCC
Confidence 010000 0001124556689999999999999999998777663 3445789998654 4554
Q ss_pred eecEEEEEccCcEEEEEeCCCCCeeeeeccCCC---------------------------------------CCCCCccc
Q 040693 204 KHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPG---------------------------------------GLGGGAMW 244 (382)
Q Consensus 204 ~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~---------------------------------------~~~g~~~~ 244 (382)
....|++++.+|.+++||++||+++|+++.... ...|...|
T Consensus 335 ~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w 414 (582)
T 1flg_A 335 IVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNW 414 (582)
T ss_dssp EEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCS
T ss_pred EEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCC
Confidence 446888999999999999999999999876530 11233344
Q ss_pred ceee---eCCeEEEEecCcc------------ccc-----cccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcc
Q 040693 245 GAAT---DERRIYTNIANSQ------------HKN-----FNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGP 304 (382)
Q Consensus 245 ~~~~---~~~~v~~~~~~~~------------~~~-----~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~ 304 (382)
+++. +.+++|+...+.. +.. +.+.|.. ....+.|+|+|++|||++|+.+... ....++
T Consensus 415 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~-~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~ 492 (582)
T 1flg_A 415 NPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMY-DDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGV 492 (582)
T ss_dssp SCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESC-SSCSEEEEEECTTTCCEEEEEEESS-CCCSCC
T ss_pred CCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCC-CCCcceEEEEECCCCCEEEEecCCC-CCcccc
Confidence 4433 2478888754310 111 1111111 1235889999999999999998765 345677
Q ss_pred eEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeCcee--EeecC-------CccCCC
Q 040693 305 VTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNGYKV--TVGFG-------NKNFTS 373 (382)
Q Consensus 305 ~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~g~--~~~~~-------~~~~~~ 373 (382)
+...+++||+++. ++.|+|||++|||++|+++++.++.++|++ .+|++||+...|. ...++ .+....
T Consensus 493 ~~tagglvf~g~~--dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G~gg~~~~~~~~~~~~~~~~~~ 570 (582)
T 1flg_A 493 LATAGNLVFTGTG--DGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVGYGGAVPLWGGDMADLTRPVAQ 570 (582)
T ss_dssp EEETTTEEEEECT--TSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCSHHHHHCTHHHHHHTTCCC
T ss_pred eEeCCCEEEEECC--CCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEccCCCcccccccccccccccCCC
Confidence 8888999999884 999999999999999999999999999988 7999999977652 11111 245788
Q ss_pred CCeEEEEEC
Q 040693 374 GTSLYAFCV 382 (382)
Q Consensus 374 g~~l~~~~~ 382 (382)
|..|++|+|
T Consensus 571 g~~~~~f~l 579 (582)
T 1flg_A 571 GGSFWVFKL 579 (582)
T ss_dssp CCEEEEEEC
T ss_pred CCEEEEEeC
Confidence 999999987
No 3
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=100.00 E-value=1.2e-32 Score=280.59 Aligned_cols=315 Identities=23% Similarity=0.378 Sum_probs=226.7
Q ss_pred CCcCCCCceeeeeecCcCc-cceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCC
Q 040693 1 AVKRSNGKLVWKTKLDDHA-RSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFG 79 (382)
Q Consensus 1 ald~~tGk~~W~~~~~~~~-~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~ 79 (382)
|||++|||++|++++.... ...+.++|++.+++||++....+.+. ++.|+|||++||+++|+++..+....
T Consensus 129 alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~--------~g~v~a~D~~tG~~~W~~~~~~~~~~ 200 (571)
T 2ad6_A 129 ALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGV--------RGAVNAFDLKTGELKWRAFATGSDDS 200 (571)
T ss_dssp EEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTC--------CCEEEEEETTTCCEEEEEESSSCHHH
T ss_pred EEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCC--------CCEEEEEECCCCcEEEEEccCCCccc
Confidence 6899999999999986422 23567899999999999886544332 68999999999999999987543200
Q ss_pred --------------------------CCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 80 --------------------------KLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 80 --------------------------~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
......|+.+|. .++++++.++||+++++...+.. .
T Consensus 201 ~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~-~~a~d~~~g~vy~~~g~~~~~~~-----------------~ 262 (571)
T 2ad6_A 201 VRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWG-WYAYDPKLNLFYYGSGNPAPWNE-----------------T 262 (571)
T ss_dssp HTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCS-CCEEETTTTEEEEECCCCSCSCG-----------------G
T ss_pred cccCcccccccccccccccccccCcccceecCCCCeee-eEEEcCCCCeEEEECCCCccccC-----------------C
Confidence 000113455564 57889888999999987321111 0
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
-+..++.+.+.|+|||++||+++|+++....+.| +++..++|++.+...+|.....+++++.
T Consensus 263 ~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~------------------d~~~~~~p~l~~~~~~G~~~~~v~~~~~ 324 (571)
T 2ad6_A 263 MRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW------------------DFAGVNQMVLTDQPVNGKMTPLLSHIDR 324 (571)
T ss_dssp GSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS------------------CCCCCCCCEEEEEEETTEEEEEEEEECT
T ss_pred ccCCCceeEEEEEEEecCCCcEEEEecCCCCccc------------------ccccCCCCEEEecccCCcEEEEEEEeCC
Confidence 1112334457899999999999999999877666 3345578999876555543356788999
Q ss_pred CcEEEEEeCCCCCeeeeeccCCC---------------------------------CCCCCcccceee---eCCeEEEEe
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPG---------------------------------GLGGGAMWGAAT---DERRIYTNI 257 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~---------------------------------~~~g~~~~~~~~---~~~~v~~~~ 257 (382)
+|.+++||++||+++|+++.... ...|...|.++. +.+++|+..
T Consensus 325 ~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~ 404 (571)
T 2ad6_A 325 NGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGL 404 (571)
T ss_dssp TSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEE
T ss_pred CcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEc
Confidence 99999999999999999876531 112333444433 368899876
Q ss_pred cCc------------cccccc-----cCCCCCC---CCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeee
Q 040693 258 ANS------------QHKNFN-----LKPSKNS---TIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGST 317 (382)
Q Consensus 258 ~~~------------~~~~~~-----~~~~~~~---~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~ 317 (382)
.+. ++..+. +.|.... ...+.|+|+|++||+++|+++.... ...+++...+++||+++.
T Consensus 405 ~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~-~~~~~~~t~gg~v~~g~~ 483 (571)
T 2ad6_A 405 NHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA-AWGGTLYTKGGLVWYATL 483 (571)
T ss_dssp ECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC-CCSBCEEETTTEEEEECT
T ss_pred hhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC-ccceeEEECCCEEEEEcC
Confidence 531 111111 1111000 2358899999999999999987653 345677778999999874
Q ss_pred cCCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeCcee
Q 040693 318 YRQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNGYKV 362 (382)
Q Consensus 318 ~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~g~ 362 (382)
++.|++||++||+++|+++++....++|++ .+|++|++...|.
T Consensus 484 --dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~~G~ 528 (571)
T 2ad6_A 484 --DGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSMYGV 528 (571)
T ss_dssp --TSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECC
T ss_pred --CCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEECCC
Confidence 899999999999999999999888889988 8999999987665
No 4
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=100.00 E-value=4.4e-32 Score=282.35 Aligned_cols=338 Identities=20% Similarity=0.311 Sum_probs=238.7
Q ss_pred CCcCCCCceeeeeecC-c-CccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCC
Q 040693 1 AVKRSNGKLVWKTKLD-D-HARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNF 78 (382)
Q Consensus 1 ald~~tGk~~W~~~~~-~-~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~ 78 (382)
|||++|||++|++... + .....+.++|++.+++||++....+.+. ++.|+|||++||+++|+++..+...
T Consensus 135 AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~--------~g~v~a~D~~tG~~~W~~~~~~~~p 206 (689)
T 1yiq_A 135 AIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGV--------RGYVTAYDAETGKEAWRFYTVPGDP 206 (689)
T ss_dssp EEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCC--------BCEEEEEETTTCCEEEEEESSCCCT
T ss_pred EEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCC--------CCEEEEEECCCCcEEEEecccCCCc
Confidence 6899999999999874 2 2234577899999999999876544332 7899999999999999998643211
Q ss_pred CCCC----------C---------CcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCC
Q 040693 79 GKLN----------E---------YAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPE 139 (382)
Q Consensus 79 ~~~~----------~---------~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (382)
.... . ..|+..|. +++++++.++||+++++...+.... + .|. ..++
T Consensus 207 ~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~-~~~~d~~~~~vy~~~~~g~~w~~~~--------~-~~~-----~gd~ 271 (689)
T 1yiq_A 207 KLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWD-SFAYDPELNLLYIGVGNGSLWDPKW--------R-SQA-----KGDN 271 (689)
T ss_dssp TSCCCSHHHHHHHTTCCSSTHHHHCEECCCCS-CEEEETTTTEEEEECCCEESSCHHH--------H-HTT-----CSCC
T ss_pred ccccccccccccccccCCceeeecCCCCcccc-ceeEcCCCCEEEEeCCCCCccccCC--------C-CCC-----CCCc
Confidence 1000 0 04556675 6899998999999998742111111 1 111 1233
Q ss_pred CCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEE
Q 040693 140 NHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWA 219 (382)
Q Consensus 140 ~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~a 219 (382)
-+.+.|+|||++||+++|+++....+.|. ++..+.|++.++..+|.....|++++.+|.+++
T Consensus 272 ~y~~~v~AlD~~TG~~~W~~~~~~~d~wd------------------~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~ 333 (689)
T 1yiq_A 272 LFLSSIVAVNADTGEYVWHYQTTPGDAWD------------------YTATQHMILAELPIDGKPRKVLMQAPKNGFFYV 333 (689)
T ss_dssp TTTTEEEEEETTTCCEEEEEESSTTCCSC------------------CCCCSCEEEEEEEETTEEEEEEEECCTTSEEEE
T ss_pred eeeeeEEEEEccCCceeEeeecCCccccc------------------ccCCCCcEEEeeccCCcEEEEEEEECCCCeEEE
Confidence 34568999999999999999988776663 334466777777667766678999999999999
Q ss_pred EeCCCCCeeeeeccCC---------------------------------CCCCCCcccceee---eCCeEEEEecCcccc
Q 040693 220 LDRDSGSLIWSMEAGP---------------------------------GGLGGGAMWGAAT---DERRIYTNIANSQHK 263 (382)
Q Consensus 220 ld~~tG~~~W~~~~~~---------------------------------~~~~g~~~~~~~~---~~~~v~~~~~~~~~~ 263 (382)
||++||+++|..+..+ +...|...|++.. +.+++|+...+....
T Consensus 334 lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~ 413 (689)
T 1yiq_A 334 IDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAY 413 (689)
T ss_dssp EETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEE
T ss_pred EECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEecccccee
Confidence 9999999998765432 1122445565443 467888875542110
Q ss_pred c--------cccCCCC--C------------------CCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEe
Q 040693 264 N--------FNLKPSK--N------------------STIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGG 315 (382)
Q Consensus 264 ~--------~~~~~~~--~------------------~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~ 315 (382)
. +...++. . ....+.|.|+|++|||++|+.+.... ...+++...+++||.+
T Consensus 414 ~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tagglvf~g 492 (689)
T 1yiq_A 414 YEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI-FNGGTLSTAGNLVFEG 492 (689)
T ss_dssp EECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEE
T ss_pred eeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC-ccCccceECCCEEEEE
Confidence 0 0000000 0 01148899999999999999987653 3456777889999999
Q ss_pred eecCCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeCcee--EeecC------CccCCCCCeEEEEEC
Q 040693 316 STYRQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNGYKV--TVGFG------NKNFTSGTSLYAFCV 382 (382)
Q Consensus 316 ~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~g~--~~~~~------~~~~~~g~~l~~~~~ 382 (382)
+. ++.|+++|++|||++|+++++.++.++|+. .+|++||+...|. ...+. .....+|..|++|.|
T Consensus 493 t~--dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~G~gg~~~~~~~~~~~~~~~~~g~~~~~f~l 567 (689)
T 1yiq_A 493 SA--DGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMAGWGGAFSTFAGALSLRAGVQPYAQVLTYKL 567 (689)
T ss_dssp CT--TSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCTTHHHHTHHHHGGGCCCCCCEEEEEEE
T ss_pred CC--CCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEEecCCccccccccccccccccCCCceEEEeec
Confidence 84 999999999999999999999999988886 7999999866542 11110 134568999999975
No 5
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=100.00 E-value=1.4e-31 Score=277.95 Aligned_cols=337 Identities=27% Similarity=0.408 Sum_probs=242.2
Q ss_pred CCcCCCCceeeeeecC-cC-ccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCC
Q 040693 1 AVKRSNGKLVWKTKLD-DH-ARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNF 78 (382)
Q Consensus 1 ald~~tGk~~W~~~~~-~~-~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~ 78 (382)
|||++|||++|++++. +. ....+.++|++.+++||++....+++. ++.|+|||++||+++|+++..+...
T Consensus 142 alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~--------~g~v~a~D~~tG~~~W~~~~~~~~~ 213 (677)
T 1kb0_A 142 ALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGV--------RGYITAYDAETGERKWRWFSVPGDP 213 (677)
T ss_dssp EEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCC--------BCEEEEEETTTCCEEEEEESSCCCT
T ss_pred EEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCC--------CCEEEEEECCCCcEEEEeccCCCCc
Confidence 6899999999999975 31 224577899999999999886544332 7899999999999999998854431
Q ss_pred CCCC----------------C----CcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCC
Q 040693 79 GKLN----------------E----YAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEP 138 (382)
Q Consensus 79 ~~~~----------------~----~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (382)
..+. . ..|+..|. .++++++.++||+++++...+... .++ |. ..+
T Consensus 214 ~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~-~~~~d~~~~~vy~~~~~~~~w~~~--------~~~-~~-----~gd 278 (677)
T 1kb0_A 214 SKPFEDESMKRAARTWDPSGKWWEAGGGGTMWD-SMTFDAELNTMYVGTGNGSPWSHK--------VRS-PK-----GGD 278 (677)
T ss_dssp TSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCS-CEEEETTTTEEEEECCCEESSCHH--------HHS-TT-----CCC
T ss_pred cccccccccccccccccccCceeEeCCCccccc-ceeEcCCCCEEEEECCCCccccCC--------CCC-cc-----CCC
Confidence 1000 0 03555664 688999999999998873211111 011 11 123
Q ss_pred CCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEE
Q 040693 139 ENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAW 218 (382)
Q Consensus 139 ~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ 218 (382)
+-+.+.|+|||++||+++|+++....+.| +++..++|++.+...+|.....|++++.+|.++
T Consensus 279 ~~~~~sv~AlD~~TG~~~W~~~~~~~d~w------------------d~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~ 340 (677)
T 1kb0_A 279 NLYLASIVALDPDTGKYKWHYQETPGDNW------------------DYTSTQPMILADIKIAGKPRKVILHAPKNGFFF 340 (677)
T ss_dssp CTTTTEEEEECTTTCCEEEEEESSTTCCS------------------CCCCCSCCEEEEEEETTEEEEEEEECCTTSEEE
T ss_pred CeeeEEEEEEECCCCCEEEEEecCCCccc------------------ccccCCCcEEEecccCCcEeeEEEEECCCCEEE
Confidence 44457899999999999999999877777 445668999998777776668899999999999
Q ss_pred EEeCCCCCeeeeeccCCC-----------------------------CCCCCcccceee---eCCeEEEEecCcccc---
Q 040693 219 ALDRDSGSLIWSMEAGPG-----------------------------GLGGGAMWGAAT---DERRIYTNIANSQHK--- 263 (382)
Q Consensus 219 ald~~tG~~~W~~~~~~~-----------------------------~~~g~~~~~~~~---~~~~v~~~~~~~~~~--- 263 (382)
+||++||+++|.++..+. ...|...|+++. +.+++|+...+....
T Consensus 341 ~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~ 420 (677)
T 1kb0_A 341 VLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMD 420 (677)
T ss_dssp EEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEE
T ss_pred EEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeec
Confidence 999999999999875431 123344555433 468899875531100
Q ss_pred -------------------c-----cccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecC
Q 040693 264 -------------------N-----FNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYR 319 (382)
Q Consensus 264 -------------------~-----~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 319 (382)
. +.+.+.. ....+.|.|+|++|||++|+++... ....+++..++++||+++ .
T Consensus 421 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~~~g~~v~~g~--~ 496 (677)
T 1kb0_A 421 DKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPK-SKPFGRLLAWDPVAQKAAWSVEHVS-PWNGGTLTTAGNVVFQGT--A 496 (677)
T ss_dssp CTTCCTTCCCTTSTTGGGTCCCCEEECSSCCC-SCCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEEC--T
T ss_pred ccccccccccccccccccccccccccccccCC-CCCccEEEEEeCCCCcEEeecCCCC-CCcCcceEeCCCEEEEEC--C
Confidence 0 0111111 1234889999999999999998765 345677778899999987 4
Q ss_pred CCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeCceeEe--ec--CCccCCCCCeEEEEEC
Q 040693 320 QGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNGYKVTV--GF--GNKNFTSGTSLYAFCV 382 (382)
Q Consensus 320 ~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~g~~~--~~--~~~~~~~g~~l~~~~~ 382 (382)
+|.|++||++||+++|+++++.+..++|+. .+|++|+....|... ++ -......|..|+.|.|
T Consensus 497 dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l 565 (677)
T 1kb0_A 497 DGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVV 565 (677)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEE
T ss_pred CCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEec
Confidence 999999999999999999999989999988 799999987554211 00 0123445788888864
No 6
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=100.00 E-value=6.9e-31 Score=253.21 Aligned_cols=267 Identities=19% Similarity=0.309 Sum_probs=208.7
Q ss_pred CCcCCCCceeeeeecCcCc------cceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeecc
Q 040693 1 AVKRSNGKLVWKTKLDDHA------RSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFML 74 (382)
Q Consensus 1 ald~~tGk~~W~~~~~~~~------~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~ 74 (382)
|||++||+++|+++++... ...+.++|++.+++||+++. ++.|+|||++||+++|++++.
T Consensus 67 a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--------------~g~l~a~d~~tG~~~W~~~~~ 132 (376)
T 3q7m_A 67 ALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE--------------KAQVYALNTSDGTVAWQTKVA 132 (376)
T ss_dssp EEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET--------------TSEEEEEETTTCCEEEEEECS
T ss_pred EEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC--------------CCEEEEEECCCCCEEEEEeCC
Confidence 6899999999999985321 23466789999999999985 789999999999999999874
Q ss_pred CCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCc
Q 040693 75 PDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGK 154 (382)
Q Consensus 75 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~ 154 (382)
.... ++|.+. ++.||+++.+ +.|++||++||+
T Consensus 133 ~~~~-------------~~p~~~--~~~v~v~~~~---------------------------------g~l~~~d~~tG~ 164 (376)
T 3q7m_A 133 GEAL-------------SRPVVS--DGLVLIHTSN---------------------------------GQLQALNEADGA 164 (376)
T ss_dssp SCCC-------------SCCEEE--TTEEEEECTT---------------------------------SEEEEEETTTCC
T ss_pred CceE-------------cCCEEE--CCEEEEEcCC---------------------------------CeEEEEECCCCc
Confidence 3221 246665 4689987754 899999999999
Q ss_pred EEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccC
Q 040693 155 IVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAG 234 (382)
Q Consensus 155 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~ 234 (382)
++|+++....... ....++|++. ++.|++++.++.++++|++||+.+|+++..
T Consensus 165 ~~W~~~~~~~~~~-------------------~~~~~~~~~~--------~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~ 217 (376)
T 3q7m_A 165 VKWTVNLDMPSLS-------------------LRGESAPTTA--------FGAAVVGGDNGRVSAVLMEQGQMIWQQRIS 217 (376)
T ss_dssp EEEEEECCC------------------------CCCCCCEEE--------TTEEEECCTTTEEEEEETTTCCEEEEEECC
T ss_pred EEEEEeCCCCcee-------------------ecCCCCcEEE--------CCEEEEEcCCCEEEEEECCCCcEEEEEecc
Confidence 9999987643110 0112567665 678999999999999999999999999865
Q ss_pred CCCCC------CCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEe
Q 040693 235 PGGLG------GGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVA 308 (382)
Q Consensus 235 ~~~~~------g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~ 308 (382)
.+... ......+...++.+|+. ...+.++++|+++|+++|+.+... ...+.+.
T Consensus 218 ~~~~~~~~~~~~~~~~~p~~~~~~v~~~-----------------~~~g~l~~~d~~tG~~~w~~~~~~----~~~~~~~ 276 (376)
T 3q7m_A 218 QATGSTEIDRLSDVDTTPVVVNGVVFAL-----------------AYNGNLTALDLRSGQIMWKRELGS----VNDFIVD 276 (376)
T ss_dssp C-----------CCCCCCEEETTEEEEE-----------------CTTSCEEEEETTTCCEEEEECCCC----EEEEEEE
T ss_pred cCCCCcccccccccCCCcEEECCEEEEE-----------------ecCcEEEEEECCCCcEEeeccCCC----CCCceEE
Confidence 32100 01224456678999997 345789999999999999998643 2345678
Q ss_pred CCEEEEeeecCCCcEEEEeCCCCcEeEEEe-cCCceecceEEeCCEEEEEeCceeEeecCCccCCCCCeEEEEEC
Q 040693 309 NGVLFGGSTYRQGPIYAMDVKTGKILWSYD-TGATIYGGASVSNGCIYMGNGYKVTVGFGNKNFTSGTSLYAFCV 382 (382)
Q Consensus 309 ~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~-~~~~~~~~p~~~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~~~ 382 (382)
++.+|+++. ++.|+++|+++|+++|+.+ ......++|++.+++||+++.+|. ++++|..+|+.+|.+.+
T Consensus 277 ~~~l~~~~~--~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~---l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 277 GNRIYLVDQ--NDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGY---LHWINVEDGRFVAQQKV 346 (376)
T ss_dssp TTEEEEEET--TCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSE---EEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcC--CCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCe---EEEEECCCCcEEEEEec
Confidence 899999984 8999999999999999998 445677889999999999998875 68899999999999864
No 7
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=100.00 E-value=2e-30 Score=269.07 Aligned_cols=338 Identities=22% Similarity=0.402 Sum_probs=236.3
Q ss_pred CCcCCCCceeeeeecCcC-ccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCC
Q 040693 1 AVKRSNGKLVWKTKLDDH-ARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFG 79 (382)
Q Consensus 1 ald~~tGk~~W~~~~~~~-~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~ 79 (382)
|||++|||++|+++..+. ....+.++|++.+++||++....+.+. +|.|+|||++||+++|+++..+....
T Consensus 131 alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~--------~g~v~a~D~~tG~~~W~~~~~~~~p~ 202 (668)
T 1kv9_A 131 ALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGV--------RGFVSAYDADTGKLAWRFYTVPGDPA 202 (668)
T ss_dssp EEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCC--------BCEEEEEETTTCCEEEEEESSCCCTT
T ss_pred EEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCC--------CCEEEEEECCCCcEEEEecccCCCCC
Confidence 689999999999997532 234567899999999999876544332 78999999999999999987432111
Q ss_pred CC----------CCC---------cCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCC
Q 040693 80 KL----------NEY---------AGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPEN 140 (382)
Q Consensus 80 ~~----------~~~---------~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (382)
.. ..+ .|+..|. +++++++.++||+++++...+.... + +| ...++-
T Consensus 203 ~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~-~~a~d~~~~~vy~~~~~g~~w~~~~--------~-~~-----~~gd~l 267 (668)
T 1kv9_A 203 LPYEHPELREAAKTWQGDQYWKLGGGGTVWD-SMAYDPELDLLYVGTGNGSPWNREV--------R-SP-----GGGDNL 267 (668)
T ss_dssp SCCSSHHHHHHHTTCCSSCHHHHCEECCCCS-CEEEETTTTEEEEECCCEESSCHHH--------H-ST-----TCCCCT
T ss_pred ccccccccccccccCCccceeeeCCCCcccc-ceEEcCCCCEEEEeCCCCCccccCC--------C-CC-----CCCCce
Confidence 00 000 3456675 6899998899999998742211111 1 11 123344
Q ss_pred CcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEE
Q 040693 141 HSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWAL 220 (382)
Q Consensus 141 ~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~al 220 (382)
+.+.|+|||++||+++|+++..+.+.|. ++..+.|++.++..+|.....|++++.+|.+++|
T Consensus 268 ~~~~v~AlD~~tG~~~W~~~~~~~~~wd------------------~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~l 329 (668)
T 1kv9_A 268 YLSSILAIRPDTGKLAWHYQVTPGDSWD------------------FTATQQITLAELNIDGKPRKVLMQAPKNGFFYVL 329 (668)
T ss_dssp TTTEEEEECTTTCCEEEEEESSTTCCSC------------------CCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEE
T ss_pred eeeeEEEEcCCCCceeeEeecCCCcccc------------------ccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEE
Confidence 5578999999999999999998777663 3344667777777777666789999999999999
Q ss_pred eCCCCCeeeeeccCCC------------------------------CCCCCcccceee---eCCeEEEEecCccc-----
Q 040693 221 DRDSGSLIWSMEAGPG------------------------------GLGGGAMWGAAT---DERRIYTNIANSQH----- 262 (382)
Q Consensus 221 d~~tG~~~W~~~~~~~------------------------------~~~g~~~~~~~~---~~~~v~~~~~~~~~----- 262 (382)
|++||+++|..+..+. ...|...|++.. +.+++|+...+...
T Consensus 330 D~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~ 409 (668)
T 1kv9_A 330 DRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNE 409 (668)
T ss_dssp ETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCC
T ss_pred ECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeee
Confidence 9999999966543320 112333444333 45788886543210
Q ss_pred -ccc------ccC------CCC-CCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeC
Q 040693 263 -KNF------NLK------PSK-NSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDV 328 (382)
Q Consensus 263 -~~~------~~~------~~~-~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~ 328 (382)
..+ ... ... .....+.|+|+|++|||++|+.+.... ...+++...+++||+++. ++.|+++|.
T Consensus 410 ~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~~~~~t~gg~vf~g~~--dg~l~a~d~ 486 (668)
T 1kv9_A 410 GKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH-WNGGTLSTAGNLVFQGTA--AGQMHAYSA 486 (668)
T ss_dssp GGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEECT--TSEEEEEET
T ss_pred ccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC-CcCceeEeCCCEEEEECC--cccchhhhh
Confidence 000 000 000 112348899999999999999987653 456777788999999984 999999999
Q ss_pred CCCcEeEEEecCCceecceEE--eCCEEEEEeCceeEeec----C----CccCCCCCeEEEEEC
Q 040693 329 KTGKILWSYDTGATIYGGASV--SNGCIYMGNGYKVTVGF----G----NKNFTSGTSLYAFCV 382 (382)
Q Consensus 329 ~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~g~~~~~----~----~~~~~~g~~l~~~~~ 382 (382)
++|+++|+++++.++.++|+. .+|++||+...|.-..+ - .+...+|..|+.|.+
T Consensus 487 ~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~G~g~~~~~~~~~~~~~~~~~~~~~i~~~~l 550 (668)
T 1kv9_A 487 DKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFAL 550 (668)
T ss_dssp TTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEE
T ss_pred hcChhheEecCCCCcccCceEEEECCEEEEEEEecCCCccccccccccccccCCCCCeEEEEEc
Confidence 999999999999888888886 79999998766531110 0 022346888888864
No 8
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.97 E-value=2.6e-29 Score=242.15 Aligned_cols=269 Identities=18% Similarity=0.319 Sum_probs=202.5
Q ss_pred CCCceeeeeecCcCcc-ceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCC
Q 040693 5 SNGKLVWKTKLDDHAR-SFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNE 83 (382)
Q Consensus 5 ~tGk~~W~~~~~~~~~-~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~ 83 (382)
.+++++|++++++... ....++|++.+++||+++. ++.|+|||++||+++|++++.......
T Consensus 26 ~~~~~~W~~~~~~~~~~~~~~~~p~v~~~~v~~~~~--------------~g~v~a~d~~tG~~~W~~~~~~~~~~~--- 88 (376)
T 3q7m_A 26 FTPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADR--------------AGLVKALNADDGKEIWSVSLAEKDGWF--- 88 (376)
T ss_dssp SCCEEEEEECCTTTTTTSCCCCCCEEETTEEEEECT--------------TSEEEEEETTTCCEEEEEECCC---CC---
T ss_pred CcceEEeEEecCCCccccceeeccEEECCEEEEEcC--------------CCeEEEEEccCCceeeeecCccccccc---
Confidence 4689999999865321 2345699999999999985 789999999999999999874321100
Q ss_pred CcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCC
Q 040693 84 YAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGG 163 (382)
Q Consensus 84 ~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~ 163 (382)
........+.+.++ ++.||+++.+ +.|+|||++||+++|+++...
T Consensus 89 ~~~~~~~~~~~~~~--~~~v~v~~~~---------------------------------g~l~a~d~~tG~~~W~~~~~~ 133 (376)
T 3q7m_A 89 SKEPALLSGGVTVS--GGHVYIGSEK---------------------------------AQVYALNTSDGTVAWQTKVAG 133 (376)
T ss_dssp SCCCCCEEEEEEEE--TTEEEEEETT---------------------------------SEEEEEETTTCCEEEEEECSS
T ss_pred cccCcccccCceEe--CCEEEEEcCC---------------------------------CEEEEEECCCCCEEEEEeCCC
Confidence 00000111234454 4689998764 899999999999999998764
Q ss_pred CcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcc
Q 040693 164 YDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAM 243 (382)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~ 243 (382)
. +.++|++. ++.|++++.++.|+++|++||+++|+++...+.......
T Consensus 134 ~------------------------~~~~p~~~--------~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 134 E------------------------ALSRPVVS--------DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp C------------------------CCSCCEEE--------TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred c------------------------eEcCCEEE--------CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 3 23567665 678999999999999999999999999875432211122
Q ss_pred cceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCC---------CCcceEEeCCEEEE
Q 040693 244 WGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGT---------APGPVTVANGVLFG 314 (382)
Q Consensus 244 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~---------~~~~~~~~~~~v~~ 314 (382)
..+.+.++.||+. ...+.|+++|+++|+++|+........ ....+.+.++.+|+
T Consensus 182 ~~~~~~~~~v~~g-----------------~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~ 244 (376)
T 3q7m_A 182 SAPTTAFGAAVVG-----------------GDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFA 244 (376)
T ss_dssp CCCEEETTEEEEC-----------------CTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEE
T ss_pred CCcEEECCEEEEE-----------------cCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEE
Confidence 4566678899987 345889999999999999998654210 22344577899999
Q ss_pred eeecCCCcEEEEeCCCCcEeEEEecCCceecceEEeCCEEEEEeCceeEeecCCccCCCCCeEEEEE
Q 040693 315 GSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVSNGCIYMGNGYKVTVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 315 ~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~~ 381 (382)
++. ++.|+++|+++|+++|+.+.+. ..+|++.+++||+++.+|. ++++|..+|+.+|.+.
T Consensus 245 ~~~--~g~l~~~d~~tG~~~w~~~~~~--~~~~~~~~~~l~~~~~~g~---l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 245 LAY--NGNLTALDLRSGQIMWKRELGS--VNDFIVDGNRIYLVDQNDR---VMALTIDGGVTLWTQS 304 (376)
T ss_dssp ECT--TSCEEEEETTTCCEEEEECCCC--EEEEEEETTEEEEEETTCC---EEEEETTTCCEEEEEC
T ss_pred Eec--CcEEEEEECCCCcEEeeccCCC--CCCceEECCEEEEEcCCCe---EEEEECCCCcEEEeec
Confidence 884 8999999999999999998654 4578889999999998866 6889999999999874
No 9
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.97 E-value=1.5e-27 Score=243.48 Aligned_cols=219 Identities=25% Similarity=0.358 Sum_probs=144.9
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKL 81 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~ 81 (382)
.|.++++++|+++++......+.++|++.+++||+++. .+.|+|||++||+++|++++.......+
T Consensus 39 ~n~~~~~~~W~~~~~~~~~~g~~~~P~v~~g~vyv~~~--------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~ 104 (582)
T 1flg_A 39 DNVFKLTPAWSYSFGDEKQRGQESQAIVSDGVIYVTAS--------------YSRLFALDAKTGKRLWTYNHRLPDDIRP 104 (582)
T ss_dssp TTGGGCEEEEEEECCTTCCSCCCCCCEEETTEEEEEET--------------TTEEEEEESSSCCEEEEEECCCCTTCCC
T ss_pred cccCCCcEEEEEECCCccCCcceeccEEECCEEEEEcC--------------CCCEEEEECCCCcEEEEEcCCCCccccc
Confidence 46678999999998753323356899999999999885 3559999999999999998753321100
Q ss_pred CCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEec
Q 040693 82 NEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQL 161 (382)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~ 161 (382)
..+ .....+++. ++.||+++.+ +.|+|||++||+++|+++.
T Consensus 105 --~~~--~~~~g~a~~--~~~v~~~t~d---------------------------------g~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 105 --CCD--VVNRGAAIY--GDKVFFGTLD---------------------------------ASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp --SSC--SCCCCCEEE--TTEEEEEETT---------------------------------TEEEEEESSSCCEEEEEEC
T ss_pred --ccc--cCCCccEEE--CCEEEEEeCC---------------------------------CEEEEEECCCCCEEeeecC
Confidence 000 001234454 4689998754 8999999999999999987
Q ss_pred CCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc------CcEEEEEeCCCCCeeeeeccCC
Q 040693 162 GGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK------SGFAWALDRDSGSLIWSMEAGP 235 (382)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~------~g~l~ald~~tG~~~W~~~~~~ 235 (382)
..... .+.+.++|++..-..+| ...|+++.. ++.|+|||++||+++|+.+...
T Consensus 146 ~~~~~-------------------~~~~~~sP~v~~~~~~G--~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~ 204 (582)
T 1flg_A 146 ADHGA-------------------GYTMTGAPTIVKDGKTG--KVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVE 204 (582)
T ss_dssp SCGGG-------------------TCBCCSCCEEEECTTTC--CEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESST
T ss_pred CCCCc-------------------CcccccCCEEeCCCcCC--cEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCc
Confidence 64310 12355789887311111 117777653 7899999999999999986531
Q ss_pred CC-----------------------------------CCCCccccee-e--eCCeEEEEecCcccccccc--C--CCC--
Q 040693 236 GG-----------------------------------LGGGAMWGAA-T--DERRIYTNIANSQHKNFNL--K--PSK-- 271 (382)
Q Consensus 236 ~~-----------------------------------~~g~~~~~~~-~--~~~~v~~~~~~~~~~~~~~--~--~~~-- 271 (382)
.. ..+...|... + +.++||+...+... +.. + ++.
T Consensus 205 ~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~--~~~~~r~~~gg~~ 282 (582)
T 1flg_A 205 GHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGP--WNTWARTAKGGNP 282 (582)
T ss_dssp TCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSS--SCGGGGSCTTSCS
T ss_pred cccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCc--ccCcccccCCCcc
Confidence 00 0122334432 2 46899998765321 111 1 110
Q ss_pred ---CCCCCceEEEEECCCCcEEeeecCC
Q 040693 272 ---NSTIAGGWVAMDASNGNVLWSTADP 296 (382)
Q Consensus 272 ---~~~~~g~v~a~d~~tG~~~W~~~~~ 296 (382)
.....+.|+|+|++||+++|++...
T Consensus 283 ~~~d~~~~~~v~AlD~~TG~~~W~~q~~ 310 (582)
T 1flg_A 283 HDYDSLYTSGQVGVDPSSGEVKWFYQHT 310 (582)
T ss_dssp TTCCCTTCSEEEEECTTTCCEEEEEESS
T ss_pred cccCCcccceEEEEeCCCCCEEEEEeCC
Confidence 1223478999999999999998753
No 10
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.96 E-value=7.4e-27 Score=237.90 Aligned_cols=300 Identities=20% Similarity=0.285 Sum_probs=194.9
Q ss_pred CCcC-CCCceeeeeecCcCccc-------eeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeee
Q 040693 1 AVKR-SNGKLVWKTKLDDHARS-------FITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTF 72 (382)
Q Consensus 1 ald~-~tGk~~W~~~~~~~~~~-------~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~ 72 (382)
|||+ +|||++|++++...... ....+|++.+++||+++. ++.|+|||++||+++|+++
T Consensus 77 AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--------------dg~l~alD~~tG~~~W~~~ 142 (571)
T 2ad6_A 77 ALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA--------------NGHLLALDAKTGKINWEVE 142 (571)
T ss_dssp EEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--------------TSEEEEEETTTCCEEEEEE
T ss_pred EEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC--------------CCEEEEEECCCCCEEEEec
Confidence 6899 99999999987642110 234578999999999985 8899999999999999998
Q ss_pred ccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCC
Q 040693 73 MLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDT 152 (382)
Q Consensus 73 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~t 152 (382)
+..... + ....++|++. ++.||++.... ....++.|+|||++|
T Consensus 143 ~~~~~~-------~-~~~~~~P~v~--~g~v~vg~~~~---------------------------~~~~~g~v~a~D~~t 185 (571)
T 2ad6_A 143 VCDPKV-------G-STLTQAPFVA--KDTVLMGCSGA---------------------------ELGVRGAVNAFDLKT 185 (571)
T ss_dssp CCCGGG-------T-CBCCSCCEEE--TTEEEEECBCG---------------------------GGTCCCEEEEEETTT
T ss_pred CCCCCc-------c-ceeccCCEEE--CCEEEEEecCC---------------------------ccCCCCEEEEEECCC
Confidence 742110 0 0112357665 46899876520 001248999999999
Q ss_pred CcEEEEEecCCCcccccccccCCCCC----------------CCCCCC---CCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 153 GKIVWYKQLGGYDVWFGACNWYLNPN----------------CPPGPS---PDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 153 G~~~W~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~---~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
|+++|+++......-. ...|. .++... ........+.+. ...+.||+++.
T Consensus 186 G~~~W~~~~~~~~~~~-----~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d------~~~g~vy~~~g 254 (571)
T 2ad6_A 186 GELKWRAFATGSDDSV-----RLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYD------PKLNLFYYGSG 254 (571)
T ss_dssp CCEEEEEESSSCHHHH-----TBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEE------TTTTEEEEECC
T ss_pred CcEEEEEccCCCcccc-----ccCcccccccccccccccccccCcccceecCCCCeeeeEEEc------CCCCeEEEECC
Confidence 9999999876432000 00000 000000 000000122221 12467777764
Q ss_pred C----------------cEEEEEeCCCCCeeeeeccCCCCC-CCCcccceee-e---CC----eEEEEecCccccccccC
Q 040693 214 S----------------GFAWALDRDSGSLIWSMEAGPGGL-GGGAMWGAAT-D---ER----RIYTNIANSQHKNFNLK 268 (382)
Q Consensus 214 ~----------------g~l~ald~~tG~~~W~~~~~~~~~-~g~~~~~~~~-~---~~----~v~~~~~~~~~~~~~~~ 268 (382)
+ +.|+|||++||+++|+++..+... .......++. + ++ .+++.
T Consensus 255 ~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~------------ 322 (571)
T 2ad6_A 255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHI------------ 322 (571)
T ss_dssp CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEE------------
T ss_pred CCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEe------------
Confidence 2 369999999999999998753210 0001112222 2 33 24444
Q ss_pred CCCCCCCCceEEEEECCCCcEEeeecCCCCCC--------C-----------------------------CcceEEe--C
Q 040693 269 PSKNSTIAGGWVAMDASNGNVLWSTADPSNGT--------A-----------------------------PGPVTVA--N 309 (382)
Q Consensus 269 ~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~--------~-----------------------------~~~~~~~--~ 309 (382)
...|.+++||++||+++|+.+...... . -.++.++ .
T Consensus 323 -----~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 323 -----DRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp -----CTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred -----CCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 456899999999999999987543100 0 0123343 4
Q ss_pred CEEEEeeec-----------------------------------CCCcEEEEeCCCCcEeEEEecCCceecceE-EeCCE
Q 040693 310 GVLFGGSTY-----------------------------------RQGPIYAMDVKTGKILWSYDTGATIYGGAS-VSNGC 353 (382)
Q Consensus 310 ~~v~~~~~~-----------------------------------~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~-~~~g~ 353 (382)
+++|+.+.. ..|.|+|+|++||+++|+++.+....++++ ..++.
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~ 477 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGL 477 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTE
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCE
Confidence 788887530 247899999999999999998876666664 46899
Q ss_pred EEEEeCceeEeecCCccCCCCCeEEEEEC
Q 040693 354 IYMGNGYKVTVGFGNKNFTSGTSLYAFCV 382 (382)
Q Consensus 354 lyv~~~~g~~~~~~~~~~~~g~~l~~~~~ 382 (382)
||+++.+|. ++++|.++|++||.|.+
T Consensus 478 v~~g~~dg~---l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 478 VWYATLDGY---LKALDNKDGKELWNFKM 503 (571)
T ss_dssp EEEECTTSE---EEEEETTTCCEEEEEEC
T ss_pred EEEEcCCCe---EEEEECCCCCEEEEEeC
Confidence 999988876 68899999999999974
No 11
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.96 E-value=2.9e-27 Score=241.36 Aligned_cols=305 Identities=17% Similarity=0.226 Sum_probs=193.2
Q ss_pred CCcC-CCCceeeeeecCcCccc-------eeeeceEE--EcCE----EEEeccCccccccccccccccceEEEEeCccCc
Q 040693 1 AVKR-SNGKLVWKTKLDDHARS-------FITMSGTY--YKGA----YYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGR 66 (382)
Q Consensus 1 ald~-~tGk~~W~~~~~~~~~~-------~~~~~p~v--~~~~----v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~ 66 (382)
|||+ +|||++|+++....... .....|++ .+++ ||+++. ++.|+|||++||+
T Consensus 77 AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~--------------dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 77 ALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL--------------DGNVAALNAETGE 142 (599)
T ss_dssp EEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT--------------TSEEEEEETTTCC
T ss_pred EEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC--------------CCEEEEEECCCCC
Confidence 6899 99999999987543110 12346788 7888 999885 8899999999999
Q ss_pred eeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEE
Q 040693 67 ILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLL 146 (382)
Q Consensus 67 ~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ 146 (382)
++|++++..... + ....++|++. ++.||++.... ....++.|+
T Consensus 143 ~~W~~~~~~~~~-------~-~~~~ssP~v~--~g~V~vg~~g~---------------------------e~g~~g~v~ 185 (599)
T 1w6s_A 143 TVWKVENSDIKV-------G-STLTIAPYVV--KDKVIIGSSGA---------------------------ELGVRGYLT 185 (599)
T ss_dssp EEEEEECCCGGG-------T-CBCCSCCEEE--TTEEEECCBCG---------------------------GGTCCCEEE
T ss_pred EEEeecCCCCCc-------c-ceeecCCEEE--CCEEEEEeccc---------------------------ccCCCCeEE
Confidence 999998742110 1 1112457775 36888876420 001248999
Q ss_pred EEECCCCcEEEEEecCCCcccc-ccc-ccCCCCC---------CCCCCC---CCCCCCCCceEEEeeeCceeecEEEEEc
Q 040693 147 ALDLDTGKIVWYKQLGGYDVWF-GAC-NWYLNPN---------CPPGPS---PDADFGEAPMMLSMYRNKVKHDIVVAVQ 212 (382)
Q Consensus 147 ald~~tG~~~W~~~~~~~~~~~-~~~-~~~~~~~---------~~~~~~---~~~~~~~~p~~~~~~~~g~~~~~v~~~~ 212 (382)
|||++||+++|++.......-. ... .....|. .+++.. ......+.+.+. ...++||+++
T Consensus 186 A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d------~~~g~vy~g~ 259 (599)
T 1w6s_A 186 AYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYD------PGTNLIYFGT 259 (599)
T ss_dssp EEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEE------TTTTEEEEEC
T ss_pred EEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEe------CCCCEEEEeC
Confidence 9999999999999876542100 000 0000000 000000 000011233332 2257888887
Q ss_pred cC----------------cEEEEEeCCCCCeeeeeccCCCCC-CCCccccee-ee----CC----eEEEEecCccccccc
Q 040693 213 KS----------------GFAWALDRDSGSLIWSMEAGPGGL-GGGAMWGAA-TD----ER----RIYTNIANSQHKNFN 266 (382)
Q Consensus 213 ~~----------------g~l~ald~~tG~~~W~~~~~~~~~-~g~~~~~~~-~~----~~----~v~~~~~~~~~~~~~ 266 (382)
.+ +.|+|||++||+++|+++..+... .-.....+. .+ ++ .++..
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~---------- 329 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHP---------- 329 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEE----------
T ss_pred CCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEE----------
Confidence 65 379999999999999999754210 000111121 12 23 23333
Q ss_pred cCCCCCCCCCceEEEEECCCCcEEeeecCCCCC-------------------------------------CCCcceEEe-
Q 040693 267 LKPSKNSTIAGGWVAMDASNGNVLWSTADPSNG-------------------------------------TAPGPVTVA- 308 (382)
Q Consensus 267 ~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~-------------------------------------~~~~~~~~~- 308 (382)
...|.+++||++||+++|+.+..... ..-.++.++
T Consensus 330 -------~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp 402 (599)
T 1w6s_A 330 -------DRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDP 402 (599)
T ss_dssp -------CTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET
T ss_pred -------CCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCC
Confidence 45689999999999999998753200 000122232
Q ss_pred -CCEEEEeee-------------------------------c------CCCcEEEEeCCCCcEeEEEecCCceecceE-E
Q 040693 309 -NGVLFGGST-------------------------------Y------RQGPIYAMDVKTGKILWSYDTGATIYGGAS-V 349 (382)
Q Consensus 309 -~~~v~~~~~-------------------------------~------~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~-~ 349 (382)
.+++|+... . ..|.|+|+|++|||++|+.+.+....++++ .
T Consensus 403 ~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t 482 (599)
T 1w6s_A 403 KRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMAT 482 (599)
T ss_dssp TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEE
T ss_pred CCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEe
Confidence 345555421 0 247899999999999999988766666654 5
Q ss_pred eCCEEEEEeCceeEeecCCccCCCCCeEEEEEC
Q 040693 350 SNGCIYMGNGYKVTVGFGNKNFTSGTSLYAFCV 382 (382)
Q Consensus 350 ~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~~~ 382 (382)
.++.||+++.+|. ++++|.+||++||.|++
T Consensus 483 agg~vf~gt~dg~---l~A~D~~tG~~lW~~~l 512 (599)
T 1w6s_A 483 AGDLVFYGTLDGY---LKARDSDTGDLLWKFKI 512 (599)
T ss_dssp TTTEEEEECTTSE---EEEEETTTCCEEEEEEC
T ss_pred cCCEEEEECCCCe---EEEEECCCCCEEEEeeC
Confidence 7899999988876 78999999999999975
No 12
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.96 E-value=9.6e-27 Score=241.66 Aligned_cols=298 Identities=20% Similarity=0.338 Sum_probs=202.4
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKL 81 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~ 81 (382)
.|.++++++|++.++.. ..+.++|++.+++||+++. ++.|+|||++||+++|++++.......+
T Consensus 50 ~n~~~~~~~W~~~~~~~--~g~~~~P~v~~g~vyv~~~--------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~ 113 (677)
T 1kb0_A 50 ANVKDLGLAWSYNLEST--RGVEATPVVVDGIMYVSAS--------------WSVVHAIDTRTGNRIWTYDPQIDRSTGF 113 (677)
T ss_dssp TTGGGEEEEEEEECCCC--SCCCCCCEEETTEEEEECG--------------GGCEEEEETTTTEEEEEECCCCCGGGGG
T ss_pred ccccCccEEEEEECCCC--CCceeCCEEECCEEEEECC--------------CCeEEEEECCCCcEEEEEcCCCCccccc
Confidence 35678999999998642 2256899999999999885 7899999999999999998743211000
Q ss_pred CCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEec
Q 040693 82 NEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQL 161 (382)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~ 161 (382)
... .. .....++++ ++.||+++.+ +.|+|||++||+++|+++.
T Consensus 114 ~~~-~~-~~~~~~a~~--~~~v~v~~~d---------------------------------g~l~alD~~tG~~~W~~~~ 156 (677)
T 1kb0_A 114 KGC-CD-VVNRGVALW--KGKVYVGAWD---------------------------------GRLIALDAATGKEVWHQNT 156 (677)
T ss_dssp GSS-SC-SCCCCCEEE--TTEEEEECTT---------------------------------SEEEEEETTTCCEEEEEET
T ss_pred ccc-cc-CCCCCceEE--CCEEEEEcCC---------------------------------CEEEEEECCCCCEEeeecC
Confidence 000 00 001235554 4689998754 8999999999999999987
Q ss_pred C-CCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc------CcEEEEEeCCCCCeeeeeccC
Q 040693 162 G-GYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK------SGFAWALDRDSGSLIWSMEAG 234 (382)
Q Consensus 162 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~------~g~l~ald~~tG~~~W~~~~~ 234 (382)
. ... ..+.+.++|++. ++.|+++.. ++.|++||++||+++|+++..
T Consensus 157 ~~~~~-------------------~~~~~~~~p~v~--------~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~ 209 (677)
T 1kb0_A 157 FEGQK-------------------GSLTITGAPRVF--------KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSV 209 (677)
T ss_dssp TTTCC-------------------SSCBCCSCCEEE--------TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred CcCcC-------------------cCcccccCcEEE--------CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccC
Confidence 6 211 012355788886 678888764 689999999999999999875
Q ss_pred CCCC--------------------------CCCcccce-ee--eCCeEEEEecCcc------------------------
Q 040693 235 PGGL--------------------------GGGAMWGA-AT--DERRIYTNIANSQ------------------------ 261 (382)
Q Consensus 235 ~~~~--------------------------~g~~~~~~-~~--~~~~v~~~~~~~~------------------------ 261 (382)
.... .+...|.. .. ++++||+...+..
T Consensus 210 ~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD 289 (677)
T 1kb0_A 210 PGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALD 289 (677)
T ss_dssp CCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred CCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEE
Confidence 4321 11222322 22 4788888765421
Q ss_pred ----ccccc--cCCC------------C--------------CCCCCceEEEEECCCCcEEeeecCCCCC----------
Q 040693 262 ----HKNFN--LKPS------------K--------------NSTIAGGWVAMDASNGNVLWSTADPSNG---------- 299 (382)
Q Consensus 262 ----~~~~~--~~~~------------~--------------~~~~~g~v~a~d~~tG~~~W~~~~~~~~---------- 299 (382)
...+. ..+. . .....|.|++||.+||+++|+.+.....
T Consensus 290 ~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~ 369 (677)
T 1kb0_A 290 PDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGK 369 (677)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSC
T ss_pred CCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCc
Confidence 00111 1110 0 0134567888888888888887643200
Q ss_pred -----------------------CCCcceEEe--CCEEEEeeec------------------------------------
Q 040693 300 -----------------------TAPGPVTVA--NGVLFGGSTY------------------------------------ 318 (382)
Q Consensus 300 -----------------------~~~~~~~~~--~~~v~~~~~~------------------------------------ 318 (382)
..-.++.++ .+++|+.+..
T Consensus 370 ~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~ 449 (677)
T 1kb0_A 370 PIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAE 449 (677)
T ss_dssp EEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSS
T ss_pred eeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccc
Confidence 000133444 4788887530
Q ss_pred -----CCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEeCceeEeecCCccCCCCCeEEEEEC
Q 040693 319 -----RQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGNGYKVTVGFGNKNFTSGTSLYAFCV 382 (382)
Q Consensus 319 -----~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~~~ 382 (382)
..|.|+++|++|||++|+++.+...++.++. .++.+|+++.+|. ++++|.+||++||.|.+
T Consensus 450 ~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~---l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 450 PPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGR---LVAYHAATGEKLWEAPT 516 (677)
T ss_dssp CCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSE---EEEEETTTCCEEEEEEC
T ss_pred cCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCc---EEEEECCCCceeeeeeC
Confidence 0177999999999999999987766666554 6789999987766 68899999999999975
No 13
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.96 E-value=2.4e-26 Score=239.18 Aligned_cols=306 Identities=17% Similarity=0.247 Sum_probs=193.5
Q ss_pred CCcCCCCceeeeeecCcCcc-------ceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeec
Q 040693 1 AVKRSNGKLVWKTKLDDHAR-------SFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFM 73 (382)
Q Consensus 1 ald~~tGk~~W~~~~~~~~~-------~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~ 73 (382)
|||++|||++|+++...... ..+..+|++.+++||+++. ++.|+|||++||+++|+++.
T Consensus 84 AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~--------------dg~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 84 ALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL--------------DGRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp EEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--------------TSEEEEEETTTCCEEEEEEC
T ss_pred EEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc--------------CCEEEEEECCCCCEeeeecC
Confidence 68999999999998653211 1234568999999999985 89999999999999999987
Q ss_pred cCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCC
Q 040693 74 LPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTG 153 (382)
Q Consensus 74 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG 153 (382)
..+.. ......++|++. ++.||++.... +...++.|+|||++||
T Consensus 150 ~~~~~-------~~~~~~~sP~v~--~g~v~vg~~~~---------------------------~~~~~g~v~a~D~~tG 193 (689)
T 1yiq_A 150 RADHK-------RSYTITGAPRVV--NGKVVIGNGGA---------------------------EFGVRGYVTAYDAETG 193 (689)
T ss_dssp CSCTT-------SCCBCCSCCEEE--TTEEEECCBCT---------------------------TTCCBCEEEEEETTTC
T ss_pred cCCCC-------CCccccCCcEEE--CCEEEEEeCCC---------------------------ccCCCCEEEEEECCCC
Confidence 41110 000112356665 46888876431 0113589999999999
Q ss_pred cEEEEEecCCCcccccccc-cC-CCCCCCCCC-----CCCCCCCCCceEEEeeeCceeecEEEEEccCcE----------
Q 040693 154 KIVWYKQLGGYDVWFGACN-WY-LNPNCPPGP-----SPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGF---------- 216 (382)
Q Consensus 154 ~~~W~~~~~~~~~~~~~~~-~~-~~~~~~~~~-----~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~---------- 216 (382)
+++|+++............ .. .....+.+. ..-......+.+. ...++||+++.++.
T Consensus 194 ~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d------~~~~~vy~~~~~g~~w~~~~~~~~ 267 (689)
T 1yiq_A 194 KEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYD------PELNLLYIGVGNGSLWDPKWRSQA 267 (689)
T ss_dssp CEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEE------TTTTEEEEECCCEESSCHHHHHTT
T ss_pred cEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEc------CCCCEEEEeCCCCCccccCCCCCC
Confidence 9999998532110000000 00 000000000 0000011122221 12578888887764
Q ss_pred ---------EEEEeCCCCCeeeeeccCCCC-CC----CCcccceeeeCC----eEEEEecCccccccccCCCCCCCCCce
Q 040693 217 ---------AWALDRDSGSLIWSMEAGPGG-LG----GGAMWGAATDER----RIYTNIANSQHKNFNLKPSKNSTIAGG 278 (382)
Q Consensus 217 ---------l~ald~~tG~~~W~~~~~~~~-~~----g~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~g~ 278 (382)
|+|||++||+++|+++..+.. .. ..........++ .|++. +..|.
T Consensus 268 ~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~-----------------~~~G~ 330 (689)
T 1yiq_A 268 KGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQA-----------------PKNGF 330 (689)
T ss_dssp CSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEEC-----------------CTTSE
T ss_pred CCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEE-----------------CCCCe
Confidence 999999999999999864321 00 000111111122 34443 45699
Q ss_pred EEEEECCCCcEEeeecCCCCC-------------------------------------CCCcceEEe--CCEEEEeeec-
Q 040693 279 WVAMDASNGNVLWSTADPSNG-------------------------------------TAPGPVTVA--NGVLFGGSTY- 318 (382)
Q Consensus 279 v~a~d~~tG~~~W~~~~~~~~-------------------------------------~~~~~~~~~--~~~v~~~~~~- 318 (382)
+++||.+||+++|+.+..... ..-.++.++ .+++|+.+..
T Consensus 331 l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~ 410 (689)
T 1yiq_A 331 FYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIM 410 (689)
T ss_dssp EEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEEC
T ss_pred EEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEecccc
Confidence 999999999999876643200 001123444 4788887431
Q ss_pred --------C----------------------------------CCcEEEEeCCCCcEeEEEecCCceecceE-EeCCEEE
Q 040693 319 --------R----------------------------------QGPIYAMDVKTGKILWSYDTGATIYGGAS-VSNGCIY 355 (382)
Q Consensus 319 --------~----------------------------------~g~l~~ld~~tG~ilw~~~~~~~~~~~p~-~~~g~ly 355 (382)
. .|.|+|+|++|||++|+++.+....+.++ ..++.||
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf 490 (689)
T 1yiq_A 411 SAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVF 490 (689)
T ss_dssp CEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEE
T ss_pred ceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEE
Confidence 0 26799999999999999998876665444 4788999
Q ss_pred EEeCceeEeecCCccCCCCCeEEEEEC
Q 040693 356 MGNGYKVTVGFGNKNFTSGTSLYAFCV 382 (382)
Q Consensus 356 v~~~~g~~~~~~~~~~~~g~~l~~~~~ 382 (382)
+++.+|. ++++|.+||++||.|.+
T Consensus 491 ~gt~dg~---l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 491 EGSADGR---VIAYAADTGEKLWEQPA 514 (689)
T ss_dssp EECTTSE---EEEEETTTCCEEEEEEC
T ss_pred EECCCCc---EEEEECCCCccceeeeC
Confidence 9988876 68899999999999974
No 14
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.95 E-value=2.1e-25 Score=231.41 Aligned_cols=304 Identities=19% Similarity=0.242 Sum_probs=193.0
Q ss_pred CCcCCCCceeeeeecCcCcc-------ceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeec
Q 040693 1 AVKRSNGKLVWKTKLDDHAR-------SFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFM 73 (382)
Q Consensus 1 ald~~tGk~~W~~~~~~~~~-------~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~ 73 (382)
|||++|||++|+++...... ..+...|++.+++||+++. ++.|+|||++||+++|++++
T Consensus 80 AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--------------dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 80 AVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL--------------DGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp EEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--------------TSEEEEEETTTCCEEEEEEC
T ss_pred EEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC--------------CCEEEEEECCCCCEeeeecc
Confidence 68999999999998753211 1124568999999999985 88999999999999999987
Q ss_pred cCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCC
Q 040693 74 LPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTG 153 (382)
Q Consensus 74 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG 153 (382)
...... + ...++|++. ++.||++.... ....++.|+|||++||
T Consensus 146 ~~~~~~----~----~~~~~P~v~--~~~v~vg~~~~---------------------------~~~~~g~v~a~D~~tG 188 (668)
T 1kv9_A 146 TDPAKP----Y----SITGAPRVV--KGKVIIGNGGA---------------------------EYGVRGFVSAYDADTG 188 (668)
T ss_dssp SCTTSS----C----BCCSCCEEE--TTEEEECCBCT---------------------------TTCCBCEEEEEETTTC
T ss_pred CCCCCc----c----eecCCCEEE--CCEEEEeCCCC---------------------------CcCCCCEEEEEECCCC
Confidence 422110 0 112356665 46888876431 0113589999999999
Q ss_pred cEEEEEecCCCccccccccc---CCCCCCCCCCC-----CCCCCCCCceEEEeeeCceeecEEEEEccCcE---------
Q 040693 154 KIVWYKQLGGYDVWFGACNW---YLNPNCPPGPS-----PDADFGEAPMMLSMYRNKVKHDIVVAVQKSGF--------- 216 (382)
Q Consensus 154 ~~~W~~~~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~--------- 216 (382)
+++|+++............. ...+ .+.+.. ......+.+.+. ...++||++..++.
T Consensus 189 ~~~W~~~~~~~~p~~~~~~~~~~~~~~-~~~g~~~w~~~~gg~~w~~~a~d------~~~~~vy~~~~~g~~w~~~~~~~ 261 (668)
T 1kv9_A 189 KLAWRFYTVPGDPALPYEHPELREAAK-TWQGDQYWKLGGGGTVWDSMAYD------PELDLLYVGTGNGSPWNREVRSP 261 (668)
T ss_dssp CEEEEEESSCCCTTSCCSSHHHHHHHT-TCCSSCHHHHCEECCCCSCEEEE------TTTTEEEEECCCEESSCHHHHST
T ss_pred cEEEEecccCCCCCccccccccccccc-cCCccceeeeCCCCccccceEEc------CCCCEEEEeCCCCCccccCCCCC
Confidence 99999986422100000000 0000 000000 000011223222 12578888887663
Q ss_pred ----------EEEEeCCCCCeeeeeccCCCCC-C----CCcccceeeeCC----eEEEEecCccccccccCCCCCCCCCc
Q 040693 217 ----------AWALDRDSGSLIWSMEAGPGGL-G----GGAMWGAATDER----RIYTNIANSQHKNFNLKPSKNSTIAG 277 (382)
Q Consensus 217 ----------l~ald~~tG~~~W~~~~~~~~~-~----g~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~g 277 (382)
|+|||++||+++|+++..+... . ..........++ .|++. +..|
T Consensus 262 ~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~-----------------~~~G 324 (668)
T 1kv9_A 262 GGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQA-----------------PKNG 324 (668)
T ss_dssp TCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEEC-----------------CTTS
T ss_pred CCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEE-----------------CCCC
Confidence 9999999999999998753210 0 001111111133 25554 4569
Q ss_pred eEEEEECCCCcEEeeecCCCCC-------C---------------------------CCcceEEe--CCEEEEeeec---
Q 040693 278 GWVAMDASNGNVLWSTADPSNG-------T---------------------------APGPVTVA--NGVLFGGSTY--- 318 (382)
Q Consensus 278 ~v~a~d~~tG~~~W~~~~~~~~-------~---------------------------~~~~~~~~--~~~v~~~~~~--- 318 (382)
.++++|.+||+++|+.+..... . .-.++.++ .+++|+....
T Consensus 325 ~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~ 404 (668)
T 1kv9_A 325 FFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPG 404 (668)
T ss_dssp EEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCE
T ss_pred EEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccce
Confidence 9999999999999776543200 0 00123343 3678874320
Q ss_pred -------------------------------CCCcEEEEeCCCCcEeEEEecCCceec-ceEEeCCEEEEEeCceeEeec
Q 040693 319 -------------------------------RQGPIYAMDVKTGKILWSYDTGATIYG-GASVSNGCIYMGNGYKVTVGF 366 (382)
Q Consensus 319 -------------------------------~~g~l~~ld~~tG~ilw~~~~~~~~~~-~p~~~~g~lyv~~~~g~~~~~ 366 (382)
.+|.|+|+|++||+++|+.+.+....+ .++..++.||+++.+|. +
T Consensus 405 ~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~---l 481 (668)
T 1kv9_A 405 VYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQ---M 481 (668)
T ss_dssp EECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSE---E
T ss_pred EeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCccc---c
Confidence 127899999999999999998776654 55668899999988876 6
Q ss_pred CCccCCCCCeEEEEEC
Q 040693 367 GNKNFTSGTSLYAFCV 382 (382)
Q Consensus 367 ~~~~~~~g~~l~~~~~ 382 (382)
+++|.++|++||.|.+
T Consensus 482 ~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 482 HAYSADKGEALWQFEA 497 (668)
T ss_dssp EEEETTTCCEEEEEEC
T ss_pred hhhhhhcChhheEecC
Confidence 8899999999999964
No 15
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.90 E-value=3.3e-23 Score=194.61 Aligned_cols=282 Identities=18% Similarity=0.305 Sum_probs=196.5
Q ss_pred CCcCCCCceeeeeecCcCccceeeeceEE-EcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCC
Q 040693 1 AVKRSNGKLVWKTKLDDHARSFITMSGTY-YKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFG 79 (382)
Q Consensus 1 ald~~tGk~~W~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~ 79 (382)
+.|.++|+++|++.++ ..+.++|++ .++.||+++. ++.|+++| .+|+++|++.+....
T Consensus 3 ~~~~~~g~~~W~~~~~----~~~~~~~~~d~~g~l~v~t~--------------~~~l~~~d-~~g~~~~~~~~~~~~-- 61 (330)
T 3hxj_A 3 RGGVNDCKIKWEFLIG----NSIDSSPILAKNGTIYLGSS--------------NKNLYAIN-TDGSVKWFFKSGEII-- 61 (330)
T ss_dssp ---------CCTTTSC----EEECCCCEECTTSCEECSST--------------TTTTEEEC-TTSCEEESSCGGGEE--
T ss_pred ccccCCceEEEEEeCC----CCcccCceEccCCeEEEEcC--------------CCEEEEEC-CCCcEEEEEecCCCc--
Confidence 4688999999999874 346678888 5899999885 77899999 899999998763111
Q ss_pred CCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhccc----ccCCCCCCCCCCCCCCCCCcceEEEEECCCCcE
Q 040693 80 KLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQE----ENNQTTPTSPDKCIEPENHSNSLLALDLDTGKI 155 (382)
Q Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~ 155 (382)
..++.++. .+.+|+++.+.+.++.+....+. ....+.|.+.++.+...+.++.|+++|++ |+.
T Consensus 62 -----------~~~~~~~~-~g~l~v~t~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~ 128 (330)
T 3hxj_A 62 -----------ECRPSIGK-DGTIYFGSDKVYAINPDGTEKWRFDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTE 128 (330)
T ss_dssp -----------EECCEETT-TTEECCSSCEEEEECCCGGGGGGSCC-----CCEEEETTEEEEECTTSEEEEECTT-SCE
T ss_pred -----------ccceEEec-CCcEEEecCcEEEECCCCcEEEEEECCCCcccCceEECCEEEEEecCCEEEEEcCC-CCE
Confidence 01345543 35677766553333333333333 22334555667778888888999999998 999
Q ss_pred EEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCC
Q 040693 156 VWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGP 235 (382)
Q Consensus 156 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~ 235 (382)
+|++..... ...+|++. .++.|++++.++.++++|.+ |+.+|++....
T Consensus 129 ~~~~~~~~~------------------------~~~~~~~~-------~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~ 176 (330)
T 3hxj_A 129 KWRFKTKKA------------------------IYATPIVS-------EDGTIYVGSNDNYLYAINPD-GTEKWRFKTND 176 (330)
T ss_dssp EEEEECSSC------------------------CCSCCEEC-------TTSCEEEECTTSEEEEECTT-SCEEEEEECSS
T ss_pred EEEEcCCCc------------------------eeeeeEEc-------CCCEEEEEcCCCEEEEECCC-CCEeEEEecCC
Confidence 999886533 11344332 15668888888899999999 99999998643
Q ss_pred CCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEe-CCEEE
Q 040693 236 GGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVA-NGVLF 313 (382)
Q Consensus 236 ~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~-~~~v~ 313 (382)
. ....+.. .++.+|++ . +.|+++| .+|+.+|+...... . ...+..+ ++.+|
T Consensus 177 ~-----~~~~~~~d~~g~l~v~-----------------t--~~l~~~d-~~g~~~~~~~~~~~-~-~~~~~~~~~g~l~ 229 (330)
T 3hxj_A 177 A-----ITSAASIGKDGTIYFG-----------------S--DKVYAIN-PDGTEKWNFYAGYW-T-VTRPAISEDGTIY 229 (330)
T ss_dssp C-----CCSCCEECTTCCEEEE-----------------S--SSEEEEC-TTSCEEEEECCSSC-C-CSCCEECTTSCEE
T ss_pred C-----ceeeeEEcCCCEEEEE-----------------e--CEEEEEC-CCCcEEEEEccCCc-c-eeceEECCCCeEE
Confidence 2 3333444 47889987 3 6799999 89999999986542 2 3333455 56999
Q ss_pred EeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEe-CCEEEEEeCceeEeecCCccCCCCCeEEEEEC
Q 040693 314 GGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVS-NGCIYMGNGYKVTVGFGNKNFTSGTSLYAFCV 382 (382)
Q Consensus 314 ~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~-~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~~~ 382 (382)
+++. ++.|+++|. +|+.+|++.......+++++. +++||+++.+|. ++++|. +|+.+|.|.+
T Consensus 230 v~t~--~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~gg---l~~~d~-~g~~~~~~~~ 292 (330)
T 3hxj_A 230 VTSL--DGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGH---LYAINP-DGTEKWNFET 292 (330)
T ss_dssp EEET--TTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCE---EEEECT-TSCEEEEEEC
T ss_pred EEcC--CCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCC---EEEECC-CCcEEEEEEc
Confidence 9984 799999984 799999999877777778886 899999998865 577886 8999998863
No 16
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.90 E-value=2e-26 Score=222.50 Aligned_cols=245 Identities=16% Similarity=0.152 Sum_probs=145.0
Q ss_pred CCcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCC
Q 040693 1 AVKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGK 80 (382)
Q Consensus 1 ald~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~ 80 (382)
|+|++|||++|+++. . .+.++|++.++.+|+... .++.|+|||++||+.+|+.+....
T Consensus 23 a~d~~tG~~~W~~~~-~----~~~s~p~~~~g~~~v~~s-------------~dg~l~a~d~~tG~~~w~~~~~~~---- 80 (369)
T 2hz6_A 23 AVSKRTGSIKWTLKE-D----PVLQVPTHVEEPAFLPDP-------------NDGSLYTLGSKNNEGLTKLPFTIP---- 80 (369)
T ss_dssp EEETTTCCEEEEEEC-C----CSCCCC-----CCEEECT-------------TTCCEEEC-----CCSEECSCCHH----
T ss_pred EEECCCCCEEEEecC-C----CceecceEcCCCEEEEeC-------------CCCEEEEEECCCCceeeeeeccCc----
Confidence 578889999998876 2 245678888886666532 178899999889998888654210
Q ss_pred CCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEe
Q 040693 81 LNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQ 160 (382)
Q Consensus 81 ~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~ 160 (382)
....++|.+.. ++.||+++. ++.|+|+|++||+++|++.
T Consensus 81 -------~~~~~sp~~~~-~~~v~~g~~---------------------------------dg~v~a~D~~tG~~~w~~~ 119 (369)
T 2hz6_A 81 -------ELVQASPCRSS-DGILYMGKK---------------------------------QDIWYVIDLLTGEKQQTLS 119 (369)
T ss_dssp -------HHHTTCSCC------CCCCEE---------------------------------EEEEEEECCC---------
T ss_pred -------cccccCceEec-CCEEEEEeC---------------------------------CCEEEEEECCCCcEEEEec
Confidence 00012444421 245665443 4899999999999999987
Q ss_pred cCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCC
Q 040693 161 LGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGG 240 (382)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g 240 (382)
..... ..+| . ++.|+++..++.++++|++||+++|+++...
T Consensus 120 ~~~~~------------------------~~~p--~--------~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~----- 160 (369)
T 2hz6_A 120 SAFAD------------------------SLSP--S--------TSLLYLGRTEYTITMYDTKTRELRWNATYFD----- 160 (369)
T ss_dssp -----------------------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-----
T ss_pred CCCcc------------------------cccc--c--------CCEEEEEecCCEEEEEECCCCCEEEeEeccc-----
Confidence 65321 1223 1 6788888889999999999999999987531
Q ss_pred Ccccceeee-----CCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEE-eCCEEEE
Q 040693 241 GAMWGAATD-----ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTV-ANGVLFG 314 (382)
Q Consensus 241 ~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~-~~~~v~~ 314 (382)
...+++. ++.+|++ ..++.|+++|+++|+++|+.+...+. .....+ .++++|+
T Consensus 161 --~~~~~~~~~~~~~~~v~~~-----------------~~dg~v~a~d~~tG~~~W~~~~~~pv--~~~~~~~~dg~~~v 219 (369)
T 2hz6_A 161 --YAASLPEDDVDYKMSHFVS-----------------NGDGLVVTVDSESGDVLWIQNYASPV--VAFYVWQREGLRKV 219 (369)
T ss_dssp --ECCBCCCCCTTCCCCEEEE-----------------ETSCEEEEECTTTCCEEEEEECSSCE--EEEEECTTSSCEEE
T ss_pred --ccCccccCCccccceEEEE-----------------CCCCEEEEEECCCCcEEEEecCCCce--EEEEEecCCceEec
Confidence 1122222 2678876 34588999999999999999864321 111111 2455443
Q ss_pred eee-cCCCcEEEEeCCCCc----EeEEEecCCceecceEEeCCEEEEEeCceeEeecCCccCC
Q 040693 315 GST-YRQGPIYAMDVKTGK----ILWSYDTGATIYGGASVSNGCIYMGNGYKVTVGFGNKNFT 372 (382)
Q Consensus 315 ~~~-~~~g~l~~ld~~tG~----ilw~~~~~~~~~~~p~~~~g~lyv~~~~g~~~~~~~~~~~ 372 (382)
... ..++.+++||.++|+ ++|+++++..+. +|++.+++||+++.+|. +|+++..
T Consensus 220 ~~~~~~~~~l~~ld~~tG~~~~~~~W~~~~~~~~~-sp~~~~g~lyv~~~~G~---l~al~~~ 278 (369)
T 2hz6_A 220 MHINVAVETLRYLTFMSGEVGRITKWKYPFPKETE-AKSKLTPTLYVGKYSTS---LYASPSM 278 (369)
T ss_dssp CCEEEEHHHHHHHHHHHHHHHHHHTSCCCCCCHHH-HHHHSEEEECBEECSSC---EECCEEE
T ss_pred cceeecccceeeeehhcCCcccceeeeeccCcccc-ccccccceEEEecccCC---EEecCcc
Confidence 210 014568899999999 999999887766 89999999999999876 5677665
No 17
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.90 E-value=3.4e-25 Score=213.90 Aligned_cols=236 Identities=14% Similarity=0.171 Sum_probs=139.4
Q ss_pred eceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEE
Q 040693 25 MSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVY 104 (382)
Q Consensus 25 ~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~ 104 (382)
++|++.+++||+++. ++.|+|||++||+++|+++. .... +.|.+.. +.+|
T Consensus 3 ssP~v~~~~v~~gs~--------------dg~v~a~d~~tG~~~W~~~~-~~~~-------------s~p~~~~--g~~~ 52 (369)
T 2hz6_A 3 STVTLPETLLFVSTL--------------DGSLHAVSKRTGSIKWTLKE-DPVL-------------QVPTHVE--EPAF 52 (369)
T ss_dssp -----CTTEEEEEET--------------TSEEEEEETTTCCEEEEEEC-CCSC-------------CCC-------CCE
T ss_pred CCCeeeCCEEEEEcC--------------CCEEEEEECCCCCEEEEecC-CCce-------------ecceEcC--CCEE
Confidence 589999999999986 89999999999999999986 2211 2455442 3445
Q ss_pred EEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCC
Q 040693 105 IATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPS 184 (382)
Q Consensus 105 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (382)
+... .++.|+|+|++||+.+|+.+......
T Consensus 53 v~~s--------------------------------~dg~l~a~d~~tG~~~w~~~~~~~~~------------------ 82 (369)
T 2hz6_A 53 LPDP--------------------------------NDGSLYTLGSKNNEGLTKLPFTIPEL------------------ 82 (369)
T ss_dssp EECT--------------------------------TTCCEEEC-----CCSEECSCCHHHH------------------
T ss_pred EEeC--------------------------------CCCEEEEEECCCCceeeeeeccCccc------------------
Confidence 4422 13899999999999999986542211
Q ss_pred CCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccc
Q 040693 185 PDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKN 264 (382)
Q Consensus 185 ~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~ 264 (382)
+.++|++.. ++.|++++.++.++++|++||+++|+++.... ....+ +++.||++.
T Consensus 83 ----~~~sp~~~~-------~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-----~~~~p--~~~~v~~~~------- 137 (369)
T 2hz6_A 83 ----VQASPCRSS-------DGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-----DSLSP--STSLLYLGR------- 137 (369)
T ss_dssp ----HTTCSCC------------CCCCEEEEEEEEECCC-----------------------------EEEEE-------
T ss_pred ----cccCceEec-------CCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-----ccccc--cCCEEEEEe-------
Confidence 124565521 56788888899999999999999999986431 11222 678888873
Q ss_pred cccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeC-----CEEEEeeecCCCcEEEEeCCCCcEeEEEec
Q 040693 265 FNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVAN-----GVLFGGSTYRQGPIYAMDVKTGKILWSYDT 339 (382)
Q Consensus 265 ~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~ 339 (382)
.++.|+++|+++|+++|+..... ...+. +.+ +.+|+++. +|.|+++|+++|+++|+++.
T Consensus 138 ----------~dg~v~a~d~~tG~~~W~~~~~~---~~~~~-~~~~~~~~~~v~~~~~--dg~v~a~d~~tG~~~W~~~~ 201 (369)
T 2hz6_A 138 ----------TEYTITMYDTKTRELRWNATYFD---YAASL-PEDDVDYKMSHFVSNG--DGLVVTVDSESGDVLWIQNY 201 (369)
T ss_dssp ----------EEEEEECCCSSSSSCCCEEEEEE---ECCBC-CCCCTTCCCCEEEEET--SCEEEEECTTTCCEEEEEEC
T ss_pred ----------cCCEEEEEECCCCCEEEeEeccc---ccCcc-ccCCccccceEEEECC--CCEEEEEECCCCcEEEEecC
Confidence 34789999999999999987532 12222 333 67888874 89999999999999999997
Q ss_pred CCceecceEEe-CCEEEEEeCceeEeecCCccCCCCC----eEEEEE
Q 040693 340 GATIYGGASVS-NGCIYMGNGYKVTVGFGNKNFTSGT----SLYAFC 381 (382)
Q Consensus 340 ~~~~~~~p~~~-~g~lyv~~~~g~~~~~~~~~~~~g~----~l~~~~ 381 (382)
+......+++. ++.+|+....-.-..++++|..+|+ .+|.|.
T Consensus 202 ~~pv~~~~~~~~dg~~~v~~~~~~~~~l~~ld~~tG~~~~~~~W~~~ 248 (369)
T 2hz6_A 202 ASPVVAFYVWQREGLRKVMHINVAVETLRYLTFMSGEVGRITKWKYP 248 (369)
T ss_dssp SSCEEEEEECTTSSCEEECCEEEEHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred CCceEEEEEecCCceEeccceeecccceeeeehhcCCcccceeeeec
Confidence 76555444442 4555543211011236889998998 888765
No 18
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.85 E-value=7.7e-20 Score=169.36 Aligned_cols=227 Identities=10% Similarity=0.101 Sum_probs=147.5
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|++||++||+++|++....... .....+.++++ +++ +.+
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~------------~~~~~~~pdG~-ilv-s~~------------------------ 55 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWE------------CNSVAATKAGE-ILF-SYS------------------------ 55 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCC------------CCEEEECTTSC-EEE-ECB------------------------
T ss_pred CCEEEEEECCCCeEEEEeCCCccCC------------CcCeEECCCCC-EEE-eCC------------------------
Confidence 8899999999999999998732100 01345555544 555 332
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
..|+++|+ +|+++|++....... + .+.. ...+ +..+++...
T Consensus 56 ---------~~V~~~d~-~G~~~W~~~~~~~~~----------------------~-~~~~---~~~d---G~~lv~~~~ 96 (276)
T 3no2_A 56 ---------KGAKMITR-DGRELWNIAAPAGCE----------------------M-QTAR---ILPD---GNALVAWCG 96 (276)
T ss_dssp ---------SEEEEECT-TSCEEEEEECCTTCE----------------------E-EEEE---ECTT---SCEEEEEES
T ss_pred ---------CCEEEECC-CCCEEEEEcCCCCcc----------------------c-cccE---ECCC---CCEEEEecC
Confidence 68999999 899999998753210 0 0000 1111 456666555
Q ss_pred -CcEEEEEeCCCCCeeeeeccCCCCCCCCc--c--cceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCc
Q 040693 214 -SGFAWALDRDSGSLIWSMEAGPGGLGGGA--M--WGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGN 288 (382)
Q Consensus 214 -~g~l~ald~~tG~~~W~~~~~~~~~~g~~--~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~ 288 (382)
++.++++|+ +|+++|++...... .+.. . ..+..++++++.. ...+.|++||++ |+
T Consensus 97 ~~~~v~~vd~-~Gk~l~~~~~~~~~-~~~~~~~~~v~~~~~G~~lv~~-----------------~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 97 HPSTILEVNM-KGEVLSKTEFETGI-ERPHAQFRQINKNKKGNYLVPL-----------------FATSEVREIAPN-GQ 156 (276)
T ss_dssp TTEEEEEECT-TSCEEEEEEECCSC-SSGGGSCSCCEECTTSCEEEEE-----------------TTTTEEEEECTT-SC
T ss_pred CCCEEEEEeC-CCCEEEEEeccCCC-CcccccccCceECCCCCEEEEe-----------------cCCCEEEEECCC-CC
Confidence 789999997 79999999865321 1110 1 1112245555543 335889999998 99
Q ss_pred EEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC----c---eecceEEeCCEEEEEeCce
Q 040693 289 VLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA----T---IYGGASVSNGCIYMGNGYK 361 (382)
Q Consensus 289 ~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~----~---~~~~p~~~~g~lyv~~~~g 361 (382)
++|++..+.. ... .+...++.+++... ..++|++||++||+++|++.... . ..+.+...+|.+|+++..|
T Consensus 157 ~~w~~~~~~~-~~~-~~~~~~g~~~v~~~-~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 157 LLNSVKLSGT-PFS-SAFLDNGDCLVACG-DAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp EEEEEECSSC-CCE-EEECTTSCEEEECB-TTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECT
T ss_pred EEEEEECCCC-ccc-eeEcCCCCEEEEeC-CCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccC
Confidence 9999987642 222 33344554444432 36789999999999999997431 1 2234455799999998544
Q ss_pred e--------EeecCCccCCCCCeEEEEE
Q 040693 362 V--------TVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 362 ~--------~~~~~~~~~~~g~~l~~~~ 381 (382)
. ...+++++. +|+++|.|.
T Consensus 234 ~~~~~~~~~~~~~~~~~~-~g~~~W~~~ 260 (276)
T 3no2_A 234 HDREAGKGKHPQLVEIDS-EGKVVWQLN 260 (276)
T ss_dssp TCTTGGGSCCCSEEEECT-TSBEEEEEC
T ss_pred ccccccccCCceEEEECC-CCCEEEEec
Confidence 3 235778776 999999984
No 19
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.83 E-value=6e-19 Score=165.43 Aligned_cols=160 Identities=22% Similarity=0.386 Sum_probs=120.3
Q ss_pred CcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEE
Q 040693 141 HSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWAL 220 (382)
Q Consensus 141 ~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~al 220 (382)
.++.|+++|++ |+.+|++...... ..++++. .++.|++++ +.|+++
T Consensus 155 ~~~~l~~~d~~-g~~~~~~~~~~~~------------------------~~~~~~d-------~~g~l~v~t--~~l~~~ 200 (330)
T 3hxj_A 155 NDNYLYAINPD-GTEKWRFKTNDAI------------------------TSAASIG-------KDGTIYFGS--DKVYAI 200 (330)
T ss_dssp TTSEEEEECTT-SCEEEEEECSSCC------------------------CSCCEEC-------TTCCEEEES--SSEEEE
T ss_pred CCCEEEEECCC-CCEeEEEecCCCc------------------------eeeeEEc-------CCCEEEEEe--CEEEEE
Confidence 34899999998 9999999865331 1234331 256688888 669999
Q ss_pred eCCCCCeeeeeccCCCCCCCCcccceeee-CCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCC
Q 040693 221 DRDSGSLIWSMEAGPGGLGGGAMWGAATD-ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNG 299 (382)
Q Consensus 221 d~~tG~~~W~~~~~~~~~~g~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~ 299 (382)
| .+|+.+|++.... .....+..+ ++.||++. ..+.|+++| .+|+.+|++.....
T Consensus 201 d-~~g~~~~~~~~~~-----~~~~~~~~~~~g~l~v~t-----------------~~~gl~~~~-~~g~~~~~~~~~~~- 255 (330)
T 3hxj_A 201 N-PDGTEKWNFYAGY-----WTVTRPAISEDGTIYVTS-----------------LDGHLYAIN-PDGTEKWRFKTGKR- 255 (330)
T ss_dssp C-TTSCEEEEECCSS-----CCCSCCEECTTSCEEEEE-----------------TTTEEEEEC-TTSCEEEEEECSSC-
T ss_pred C-CCCcEEEEEccCC-----cceeceEECCCCeEEEEc-----------------CCCeEEEEC-CCCCEeEEeeCCCC-
Confidence 9 7899999998543 133344444 55899873 447899998 58999999986543
Q ss_pred CCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEeCceeE
Q 040693 300 TAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGNGYKVT 363 (382)
Q Consensus 300 ~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~~g~~ 363 (382)
... .+.++ ++.+|+++. +|.|+++|+ +|+++|++..+.....+++. .+++||+++.+|.+
T Consensus 256 ~~~-~~~~~~~g~l~v~t~--~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~ 317 (330)
T 3hxj_A 256 IES-SPVIGNTDTIYFGSY--DGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKF 317 (330)
T ss_dssp CCS-CCEECTTSCEEEECT--TCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCE
T ss_pred ccc-cceEcCCCeEEEecC--CCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeE
Confidence 223 34455 789999984 789999997 79999999988777788888 88999999998773
No 20
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=99.81 E-value=5e-20 Score=174.19 Aligned_cols=245 Identities=12% Similarity=0.075 Sum_probs=143.2
Q ss_pred EcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCC
Q 040693 30 YKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGN 109 (382)
Q Consensus 30 ~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~ 109 (382)
.++.||+++. +|.|+|||++||+++|+++... ... +-... .+... ..+.+|+...
T Consensus 9 ~~~~V~v~t~--------------dG~l~Ald~~tG~~~W~~~~~~-~~p-~~~~~-------~~~~~-~~~~~~vv~p- 63 (339)
T 2be1_A 9 LSDILIAADV--------------EGGLHAVDRRNGHIIWSIEPEN-FQP-LIEIQ-------EPSRL-ETYETLIIEP- 63 (339)
T ss_dssp EEEEEEEEET--------------TSCEEEEETTTTEEEEEECGGG-SCC-SEECC-------CSCTT-TSSEEEEECC-
T ss_pred eCCEEEEEeC--------------CCeEEEEECCCCcEEEEecCCc-cCC-cEEec-------CCccc-cCCcEEEEEE-
Confidence 4578999997 9999999999999999998751 000 00000 01111 2335555421
Q ss_pred CCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCC
Q 040693 110 LYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADF 189 (382)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (382)
..+|.|+|+|+.+|+.+|.+..+.... ..| .-.
T Consensus 64 ------------------------------~~dG~l~a~~~~~G~~~~~~~~~~lv~--------~SP---------~~~ 96 (339)
T 2be1_A 64 ------------------------------FGDGNIYYFNAHQGLQKLPLSIRQLVS--------TSP---------LHL 96 (339)
T ss_dssp ------------------------------STTTEEEEEETTTEEEEEEEEHHHHHT--------TCS---------EEE
T ss_pred ------------------------------CCCCEEEEEECCCCcEEeeecccccee--------ccc---------ccc
Confidence 124999999999999999988764310 000 001
Q ss_pred CCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCC--CCccccee-------eeCCeEEEEecCc
Q 040693 190 GEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLG--GGAMWGAA-------TDERRIYTNIANS 260 (382)
Q Consensus 190 ~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~--g~~~~~~~-------~~~~~v~~~~~~~ 260 (382)
.+.|++.+.- .-..++.||+++.+|.++|+|..||+++|++....+... ......+. ..++.||++..
T Consensus 97 ~~~pvv~~~~-~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~-- 173 (339)
T 2be1_A 97 KTNIVVNDSG-KIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKT-- 173 (339)
T ss_dssp ECC-----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEE--
T ss_pred CCCceeeccc-ccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecc--
Confidence 2445551100 000278999999999999999999999999987532100 00111111 12467887632
Q ss_pred cccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCC--CCCCcce-----EEeCCEEEEeeecCCCcEEEEeCCCCcE
Q 040693 261 QHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSN--GTAPGPV-----TVANGVLFGGSTYRQGPIYAMDVKTGKI 333 (382)
Q Consensus 261 ~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~--~~~~~~~-----~~~~~~v~~~~~~~~g~l~~ld~~tG~i 333 (382)
...+.+++ ++|+ +|+.+.... .....++ ...++.+|+++. +|.|++||.++|++
T Consensus 174 ---------------~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~--dg~v~A~d~~~G~~ 234 (339)
T 2be1_A 174 ---------------IFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFR--DKSLLASDLDFRIA 234 (339)
T ss_dssp ---------------EEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEET--TTEEEEECSTTCCE
T ss_pred ---------------eEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEEECC--CCEEEEEECCCCcE
Confidence 24566666 7898 899764320 0011111 112355566664 99999999999999
Q ss_pred eE-EEecCCce-----------------ecceEE-------eCCEEEEE-eCceeEeecCCccC
Q 040693 334 LW-SYDTGATI-----------------YGGASV-------SNGCIYMG-NGYKVTVGFGNKNF 371 (382)
Q Consensus 334 lw-~~~~~~~~-----------------~~~p~~-------~~g~lyv~-~~~g~~~~~~~~~~ 371 (382)
+| +.+++.++ .++|+. .++++|+. +.+|. +||+..
T Consensus 235 ~W~~~~l~sPv~~~~dv~~~~~~g~~v~~~~P~~~~~~~~~~~~~v~v~~t~~G~---~~Als~ 295 (339)
T 2be1_A 235 RWVSPTFPGIIVGLFDVFNDLRTNENILVPHPFNPGDHESISSNKVYLDQTSNLS---WFALSS 295 (339)
T ss_dssp EEECCCCSSCEEEEEEEEEETTTTEEEEEECCCCC--------CCEEEEECTTCC---EEEEET
T ss_pred EEEeecCCCCeEEEEEEEEecCCCCEEEecCCCcccccccccCCeEEEEECCCCc---EEEecC
Confidence 99 66665432 245544 57888884 55655 455543
No 21
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.80 E-value=5.6e-18 Score=156.80 Aligned_cols=232 Identities=13% Similarity=0.187 Sum_probs=147.1
Q ss_pred CCcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCC
Q 040693 1 AVKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGK 80 (382)
Q Consensus 1 ald~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~ 80 (382)
++|.+|||++|+++.+.. .......+.-++.+++.. ++.|+++|+ +|+++|++......
T Consensus 19 ~~d~~tG~~~w~~~~~~~--~~~~~~~~~pdG~ilvs~---------------~~~V~~~d~-~G~~~W~~~~~~~~--- 77 (276)
T 3no2_A 19 IINKDTKEIVWEYPLEKG--WECNSVAATKAGEILFSY---------------SKGAKMITR-DGRELWNIAAPAGC--- 77 (276)
T ss_dssp EEETTTTEEEEEEECCTT--CCCCEEEECTTSCEEEEC---------------BSEEEEECT-TSCEEEEEECCTTC---
T ss_pred EEECCCCeEEEEeCCCcc--CCCcCeEECCCCCEEEeC---------------CCCEEEECC-CCCEEEEEcCCCCc---
Confidence 378899999999997531 112233344477888733 667999999 99999999873111
Q ss_pred CCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEe
Q 040693 81 LNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQ 160 (382)
Q Consensus 81 ~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~ 160 (382)
.. .+....++++.++...+. .+.+++||+ +|+++|++.
T Consensus 78 -------~~--~~~~~~~dG~~lv~~~~~--------------------------------~~~v~~vd~-~Gk~l~~~~ 115 (276)
T 3no2_A 78 -------EM--QTARILPDGNALVAWCGH--------------------------------PSTILEVNM-KGEVLSKTE 115 (276)
T ss_dssp -------EE--EEEEECTTSCEEEEEEST--------------------------------TEEEEEECT-TSCEEEEEE
T ss_pred -------cc--cccEECCCCCEEEEecCC--------------------------------CCEEEEEeC-CCCEEEEEe
Confidence 00 123444555565554441 278999997 799999998
Q ss_pred cCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCC
Q 040693 161 LGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGG 240 (382)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g 240 (382)
......- . . ..|..+.... .+++|++...++.++++|++ |+++|++..+.
T Consensus 116 ~~~~~~~----~-~----------------~~~~~v~~~~---~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~----- 165 (276)
T 3no2_A 116 FETGIER----P-H----------------AQFRQINKNK---KGNYLVPLFATSEVREIAPN-GQLLNSVKLSG----- 165 (276)
T ss_dssp ECCSCSS----G-G----------------GSCSCCEECT---TSCEEEEETTTTEEEEECTT-SCEEEEEECSS-----
T ss_pred ccCCCCc----c-c----------------ccccCceECC---CCCEEEEecCCCEEEEECCC-CCEEEEEECCC-----
Confidence 7532100 0 0 0011111111 25677788889999999998 99999998642
Q ss_pred CcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCC---CCC--CCcceEEeCCEEEEe
Q 040693 241 GAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPS---NGT--APGPVTVANGVLFGG 315 (382)
Q Consensus 241 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~---~~~--~~~~~~~~~~~v~~~ 315 (382)
.....+...++.+++.. ...++|+++|++||+++|++.... ... ..+.....++.+|++
T Consensus 166 ~~~~~~~~~~g~~~v~~----------------~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~ 229 (276)
T 3no2_A 166 TPFSSAFLDNGDCLVAC----------------GDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYIC 229 (276)
T ss_dssp CCCEEEECTTSCEEEEC----------------BTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEE
T ss_pred CccceeEcCCCCEEEEe----------------CCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEE
Confidence 12222333344444432 224679999999999999996321 111 123333457788887
Q ss_pred ee-c--------CCCcEEEEeCCCCcEeEEEecCCc
Q 040693 316 ST-Y--------RQGPIYAMDVKTGKILWSYDTGAT 342 (382)
Q Consensus 316 ~~-~--------~~g~l~~ld~~tG~ilw~~~~~~~ 342 (382)
+. + ..++++.||+ +|+++|++.....
T Consensus 230 ~~~g~~~~~~~~~~~~~~~~~~-~g~~~W~~~~~~~ 264 (276)
T 3no2_A 230 NWQGHDREAGKGKHPQLVEIDS-EGKVVWQLNDKVK 264 (276)
T ss_dssp EECTTCTTGGGSCCCSEEEECT-TSBEEEEECCTTT
T ss_pred eccCccccccccCCceEEEECC-CCCEEEEecCccc
Confidence 74 1 1346999986 6999999987653
No 22
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1e-16 Score=151.47 Aligned_cols=187 Identities=10% Similarity=0.093 Sum_probs=119.0
Q ss_pred ceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEE--ccCcEEEEE
Q 040693 143 NSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAV--QKSGFAWAL 220 (382)
Q Consensus 143 g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~--~~~g~l~al 220 (382)
|.|+|||++||+++|+++... .+|.+.........++.+++. +.+|.|+++
T Consensus 20 G~l~Ald~~tG~~~W~~~~~~---------------------------~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~ 72 (339)
T 2be1_A 20 GGLHAVDRRNGHIIWSIEPEN---------------------------FQPLIEIQEPSRLETYETLIIEPFGDGNIYYF 72 (339)
T ss_dssp SCEEEEETTTTEEEEEECGGG---------------------------SCCSEECCCSCTTTSSEEEEECCSTTTEEEEE
T ss_pred CeEEEEECCCCcEEEEecCCc---------------------------cCCcEEecCCccccCCcEEEEEECCCCEEEEE
Confidence 999999999999999998761 112121000000002344444 679999999
Q ss_pred eCCCCCeeeeeccCCCCCCC-Cc-ccceee-------eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 221 DRDSGSLIWSMEAGPGGLGG-GA-MWGAAT-------DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 221 d~~tG~~~W~~~~~~~~~~g-~~-~~~~~~-------~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
|.++|..+|.+..+...... .. ...|++ .++.||++ ...++++|+|++||+++|
T Consensus 73 ~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~G-----------------s~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 73 NAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTG-----------------SMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp ETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEEC-----------------EEEEEEEEEETTTCCEEE
T ss_pred ECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEE-----------------ecCCEEEEEECCCCcEEE
Confidence 99999999988754210000 00 122344 78889998 445899999999999999
Q ss_pred eecCCCCCC------CCcceE------EeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCc---eec------ceEEe
Q 040693 292 STADPSNGT------APGPVT------VANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGAT---IYG------GASVS 350 (382)
Q Consensus 292 ~~~~~~~~~------~~~~~~------~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~---~~~------~p~~~ 350 (382)
+........ ...+.. ..++.||++.. ...+.+.+ ++|+ +|+++.+.- ... .....
T Consensus 136 ~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~--~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~ 211 (339)
T 2be1_A 136 AFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKT--IFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSK 211 (339)
T ss_dssp EESTTCBCC--------------------CCEEEEEEE--EEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCS
T ss_pred EEecCCCcccccccccccccccccccccCCCeEEEecc--eEEEEEEC-CCCC-eEEEeccccccccccccccccccccc
Confidence 998764211 111221 23578888774 66677777 6798 898765321 011 11123
Q ss_pred CCEEEEEeCceeEeecCCccCCCCCeEE-EE
Q 040693 351 NGCIYMGNGYKVTVGFGNKNFTSGTSLY-AF 380 (382)
Q Consensus 351 ~g~lyv~~~~g~~~~~~~~~~~~g~~l~-~~ 380 (382)
++++|+++.+|. ++++|..+|+.+| ..
T Consensus 212 Dg~~~~~~~dg~---v~A~d~~~G~~~W~~~ 239 (339)
T 2be1_A 212 DGMCIAPFRDKS---LLASDLDFRIARWVSP 239 (339)
T ss_dssp SSCCEEEETTTE---EEEECSTTCCEEEECC
T ss_pred CCcEEEECCCCE---EEEEECCCCcEEEEee
Confidence 578899988887 6889999999999 44
No 23
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.57 E-value=8.4e-12 Score=117.17 Aligned_cols=272 Identities=15% Similarity=0.151 Sum_probs=175.2
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEE--cCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYY--KGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFG 79 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~ 79 (382)
+|+++|+.+++...+..+. ...+. +..+|++... ++.|..+|+++|+++++.........
T Consensus 74 ~d~~~~~~~~~~~~~~~~~-----~~~~s~dg~~l~v~~~~-------------~~~v~~~d~~~~~~~~~~~~~~~~~~ 135 (353)
T 3vgz_A 74 LDPVTLEVTQAIHNDLKPF-----GATINNTTQTLWFGNTV-------------NSAVTAIDAKTGEVKGRLVLDDRKRT 135 (353)
T ss_dssp ECTTTCCEEEEEEESSCCC-----SEEEETTTTEEEEEETT-------------TTEEEEEETTTCCEEEEEESCCCCCC
T ss_pred EcCCCCeEEEEEecCCCcc-----eEEECCCCCEEEEEecC-------------CCEEEEEeCCCCeeEEEEecCCCccc
Confidence 5788899888887643211 22232 3458876642 67999999999999999887422110
Q ss_pred CCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEE
Q 040693 80 KLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYK 159 (382)
Q Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~ 159 (382)
. + +....-....++++++.+|+.... .++.|+.+|..+++.++..
T Consensus 136 --~-~-~~~~~~~~~~~s~dg~~l~~~~~~-------------------------------~~~~i~~~d~~~~~~~~~~ 180 (353)
T 3vgz_A 136 --E-E-VRPLQPRELVADDATNTVYISGIG-------------------------------KESVIWVVDGGNIKLKTAI 180 (353)
T ss_dssp --S-S-CCCCEEEEEEEETTTTEEEEEEES-------------------------------SSCEEEEEETTTTEEEEEE
T ss_pred --c-c-cCCCCCceEEECCCCCEEEEEecC-------------------------------CCceEEEEcCCCCceEEEe
Confidence 0 0 000000125788888889887621 1378999999999999988
Q ss_pred ecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCC
Q 040693 160 QLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLG 239 (382)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~ 239 (382)
+..... .....+ ..+ +..+++...++.++.+|..+|+.++..........
T Consensus 181 ~~~~~~------------------------~~~~~~---s~d---g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 230 (353)
T 3vgz_A 181 QNTGKM------------------------STGLAL---DSE---GKRLYTTNADGELITIDTADNKILSRKKLLDDGKE 230 (353)
T ss_dssp CCCCTT------------------------CCCCEE---ETT---TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSC
T ss_pred cCCCCc------------------------cceEEE---CCC---CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCC
Confidence 733221 011111 112 46788888899999999999999999886432111
Q ss_pred CCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEe
Q 040693 240 GGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGG 315 (382)
Q Consensus 240 g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~ 315 (382)
.......+ +++.+|+... ..+.|+.+|+++|+.+++...+.. ..+.+ +++.+|++
T Consensus 231 -~~~~~~~~s~dg~~l~~~~~----------------~~~~v~~~d~~~~~~~~~~~~~~~----~~~~~s~dg~~l~v~ 289 (353)
T 3vgz_A 231 -HFFINISLDTARQRAFITDS----------------KAAEVLVVDTRNGNILAKVAAPES----LAVLFNPARNEAYVT 289 (353)
T ss_dssp -CCEEEEEEETTTTEEEEEES----------------SSSEEEEEETTTCCEEEEEECSSC----CCEEEETTTTEEEEE
T ss_pred -cccceEEECCCCCEEEEEeC----------------CCCEEEEEECCCCcEEEEEEcCCC----ceEEECCCCCEEEEE
Confidence 11112222 5677888632 347899999999999999887542 12333 34678887
Q ss_pred eecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eC-CEEEEEeCceeEeecCCccCCCCCeEEEEEC
Q 040693 316 STYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SN-GCIYMGNGYKVTVGFGNKNFTSGTSLYAFCV 382 (382)
Q Consensus 316 ~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~-g~lyv~~~~g~~~~~~~~~~~~g~~l~~~~~ 382 (382)
.. .++.|..+|.++++++..++.+... ....+ .+ ..||+++..+.. -.....++..++.++|
T Consensus 290 ~~-~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~---~~~~~~~~~~v~~i~l 353 (353)
T 3vgz_A 290 HR-QAGKVSVIDAKSYKVVKTFDTPTHP-NSLALSADGKTLYVSVKQKST---KQQEATQPDDVIRIAL 353 (353)
T ss_dssp ET-TTTEEEEEETTTTEEEEEEECCSEE-EEEEECTTSCEEEEEEECCCB---TTBCCSSCEEEEEEEC
T ss_pred EC-CCCeEEEEECCCCeEEEEEecCCCC-CeEEEcCCCCEEEEEEccccc---ccccccCCCcEEEEeC
Confidence 63 4789999999999999998876532 23333 34 458888765442 1234455677777764
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.55 E-value=4.5e-12 Score=119.62 Aligned_cols=274 Identities=13% Similarity=0.067 Sum_probs=168.7
Q ss_pred CcCCCCceeeeeecC--cCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCC
Q 040693 2 VKRSNGKLVWKTKLD--DHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFG 79 (382)
Q Consensus 2 ld~~tGk~~W~~~~~--~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~ 79 (382)
||.+||++.-..... ....+......++.++++|++... ++.|..+|++||+++.+.......
T Consensus 22 ~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~-------------~~~v~viD~~t~~~~~~i~~~~~p-- 86 (328)
T 3dsm_A 22 YDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN-------------SHVIFAIDINTFKEVGRITGFTSP-- 86 (328)
T ss_dssp EETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG-------------GTEEEEEETTTCCEEEEEECCSSE--
T ss_pred EECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC-------------CCEEEEEECcccEEEEEcCCCCCC--
Confidence 678888875433110 001111122345678999998862 678999999999999988532110
Q ss_pred CCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEE
Q 040693 80 KLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYK 159 (382)
Q Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~ 159 (382)
...+++++ +.+|+.... ++.|..+|++|+++.++.
T Consensus 87 ------------~~i~~~~~-g~lyv~~~~--------------------------------~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 87 ------------RYIHFLSD-EKAYVTQIW--------------------------------DYRIFIINPKTYEITGYI 121 (328)
T ss_dssp ------------EEEEEEET-TEEEEEEBS--------------------------------CSEEEEEETTTTEEEEEE
T ss_pred ------------cEEEEeCC-CeEEEEECC--------------------------------CCeEEEEECCCCeEEEEE
Confidence 12345444 489997632 389999999999999988
Q ss_pred ecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEc--cCcEEEEEeCCCCCeeeeeccCCCC
Q 040693 160 QLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQ--KSGFAWALDRDSGSLIWSMEAGPGG 237 (382)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~--~~g~l~ald~~tG~~~W~~~~~~~~ 237 (382)
+...... ....+....+ .++.+++.. .++.+..+|.+|+++++..+.+..
T Consensus 122 ~~g~~~~-------------------~~~~p~~i~~--------~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~- 173 (328)
T 3dsm_A 122 ECPDMDM-------------------ESGSTEQMVQ--------YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ- 173 (328)
T ss_dssp ECTTCCT-------------------TTCBCCCEEE--------ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC-
T ss_pred EcCCccc-------------------cCCCcceEEE--------ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC-
Confidence 7654100 0000111122 156677765 378999999999999998876431
Q ss_pred CCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEe--CCEEEE
Q 040693 238 LGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVA--NGVLFG 314 (382)
Q Consensus 238 ~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~ 314 (382)
. ..... .++.+|+........ .+ . ....+.|+.||++++++..++..+... ....+.+. ++++|+
T Consensus 174 ----p-~~i~~~~dG~l~v~~~~~~~~----~~-~-~~~~~~v~~id~~t~~v~~~~~~~~g~-~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 174 ----P-TSLVMDKYNKMWTITDGGYEG----SP-Y-GYEAPSLYRIDAETFTVEKQFKFKLGD-WPSEVQLNGTRDTLYW 241 (328)
T ss_dssp ----B-CCCEECTTSEEEEEBCCBCTT----CS-S-CBCCCEEEEEETTTTEEEEEEECCTTC-CCEEEEECTTSCEEEE
T ss_pred ----c-cceEEcCCCCEEEEECCCccC----Cc-c-ccCCceEEEEECCCCeEEEEEecCCCC-CceeEEEecCCCEEEE
Confidence 1 12222 356788774431000 00 0 001378999999999998887765321 23344454 578888
Q ss_pred eeecCCCcEEEEeCCCCcEeEEEecC--CceecceEE--eCCEEEEEe----CceeEeecCCccCCCCCeEEEEEC
Q 040693 315 GSTYRQGPIYAMDVKTGKILWSYDTG--ATIYGGASV--SNGCIYMGN----GYKVTVGFGNKNFTSGTSLYAFCV 382 (382)
Q Consensus 315 ~~~~~~g~l~~ld~~tG~ilw~~~~~--~~~~~~p~~--~~g~lyv~~----~~g~~~~~~~~~~~~g~~l~~~~~ 382 (382)
.. . .|+.+|.+++++.-..-+. .......++ .+++|||++ .... .++.++.. |+.++.|.+
T Consensus 242 ~~---~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~--~V~v~d~~-g~~~~~i~~ 310 (328)
T 3dsm_A 242 IN---N-DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQG--IVYRYSPQ-GKLIDEFYV 310 (328)
T ss_dssp ES---S-SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEE--EEEEECTT-CCEEEEEEE
T ss_pred Ec---c-EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCC--EEEEECCC-CCEEEEEEe
Confidence 65 3 9999999999874211111 122233445 479999998 3323 34667777 999998864
No 25
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.54 E-value=1.3e-11 Score=115.92 Aligned_cols=250 Identities=16% Similarity=0.158 Sum_probs=163.4
Q ss_pred cCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCC
Q 040693 31 KGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNL 110 (382)
Q Consensus 31 ~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~ 110 (382)
++.+|++........ .++.|+.+|+++|+++++....... ....+++++..+|+....
T Consensus 52 g~~l~~~~~~~~~~~-------~~~~v~~~d~~~~~~~~~~~~~~~~--------------~~~~~s~dg~~l~v~~~~- 109 (353)
T 3vgz_A 52 ENALWLATSQSRKLD-------KGGVVYRLDPVTLEVTQAIHNDLKP--------------FGATINNTTQTLWFGNTV- 109 (353)
T ss_dssp TTEEEEEECCCTTTE-------ESEEEEEECTTTCCEEEEEEESSCC--------------CSEEEETTTTEEEEEETT-
T ss_pred CCEEEEEcCCCcCCC-------CCccEEEEcCCCCeEEEEEecCCCc--------------ceEEECCCCCEEEEEecC-
Confidence 357888775321111 1568999999999999998874221 246788888888887653
Q ss_pred CCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCC
Q 040693 111 YSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFG 190 (382)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (382)
++.|..+|+++|++++.......... ....+
T Consensus 110 -------------------------------~~~v~~~d~~~~~~~~~~~~~~~~~~------------------~~~~~ 140 (353)
T 3vgz_A 110 -------------------------------NSAVTAIDAKTGEVKGRLVLDDRKRT------------------EEVRP 140 (353)
T ss_dssp -------------------------------TTEEEEEETTTCCEEEEEESCCCCCC------------------SSCCC
T ss_pred -------------------------------CCEEEEEeCCCCeeEEEEecCCCccc------------------cccCC
Confidence 37999999999999999887543100 00001
Q ss_pred CCceEEEeeeCceeecEEEEEc--cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccc
Q 040693 191 EAPMMLSMYRNKVKHDIVVAVQ--KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFN 266 (382)
Q Consensus 191 ~~p~~~~~~~~g~~~~~v~~~~--~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~ 266 (382)
..|.-..+..+| ..+++.. .++.++.+|.++++.++..+.... ....... +++.+|+.
T Consensus 141 ~~~~~~~~s~dg---~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~---------- 202 (353)
T 3vgz_A 141 LQPRELVADDAT---NTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK-----MSTGLALDSEGKRLYTT---------- 202 (353)
T ss_dssp CEEEEEEEETTT---TEEEEEEESSSCEEEEEETTTTEEEEEECCCCT-----TCCCCEEETTTTEEEEE----------
T ss_pred CCCceEEECCCC---CEEEEEecCCCceEEEEcCCCCceEEEecCCCC-----ccceEEECCCCCEEEEE----------
Confidence 112222333333 4455554 478899999999999998873211 1112222 67788887
Q ss_pred cCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCC--cceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCc
Q 040693 267 LKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAP--GPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGAT 342 (382)
Q Consensus 267 ~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~--~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~ 342 (382)
...+.+..+|+++++.+++.......... ..+.+ +++.+|++.. .++.|+.+|.++|+++.+.+.+..
T Consensus 203 -------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~v~~~d~~~~~~~~~~~~~~~ 274 (353)
T 3vgz_A 203 -------NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS-KAAEVLVVDTRNGNILAKVAAPES 274 (353)
T ss_dssp -------CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES-SSSEEEEEETTTCCEEEEEECSSC
T ss_pred -------cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC-CCCEEEEEECCCCcEEEEEEcCCC
Confidence 34578999999999999998864321111 11333 3567888774 458999999999999999987654
Q ss_pred eecceEE--eCCEEEEEeCceeEeecCCccCCCCCeEEEEE
Q 040693 343 IYGGASV--SNGCIYMGNGYKVTVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 343 ~~~~p~~--~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~~ 381 (382)
....+ .++.+|+++..+..+ ..+|..+++.+..+.
T Consensus 275 --~~~~~s~dg~~l~v~~~~~~~v--~~~d~~~~~~~~~~~ 311 (353)
T 3vgz_A 275 --LAVLFNPARNEAYVTHRQAGKV--SVIDAKSYKVVKTFD 311 (353)
T ss_dssp --CCEEEETTTTEEEEEETTTTEE--EEEETTTTEEEEEEE
T ss_pred --ceEEECCCCCEEEEEECCCCeE--EEEECCCCeEEEEEe
Confidence 23333 345699988643333 345677788876654
No 26
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.38 E-value=2.8e-10 Score=107.26 Aligned_cols=227 Identities=13% Similarity=0.085 Sum_probs=146.7
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|++||++.-....... .. .-|... ....+ +++.+|++...
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n-~~----~lg~~~--~~i~~--~~~~lyv~~~~------------------------ 62 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRAN-GF----KLGDVA--QSMVI--RDGIGWIVVNN------------------------ 62 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHH-SS----CCBSCE--EEEEE--ETTEEEEEEGG------------------------
T ss_pred CceEEEEECCCCEEhhhhHhhhc-Cc----ccCccc--eEEEE--ECCEEEEEEcC------------------------
Confidence 68999999999998754422100 00 001101 01233 35788888753
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEc-
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQ- 212 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~- 212 (382)
.+.|..+|++||+++.++.... .|.-..+. .++.+|+..
T Consensus 63 --------~~~v~viD~~t~~~~~~i~~~~----------------------------~p~~i~~~----~~g~lyv~~~ 102 (328)
T 3dsm_A 63 --------SHVIFAIDINTFKEVGRITGFT----------------------------SPRYIHFL----SDEKAYVTQI 102 (328)
T ss_dssp --------GTEEEEEETTTCCEEEEEECCS----------------------------SEEEEEEE----ETTEEEEEEB
T ss_pred --------CCEEEEEECcccEEEEEcCCCC----------------------------CCcEEEEe----CCCeEEEEEC
Confidence 3789999999999999885321 23222221 134677776
Q ss_pred cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEee
Q 040693 213 KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWS 292 (382)
Q Consensus 213 ~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~ 292 (382)
.++.+..+|.+|+++.++.+.+............+.+++.+|++..+ ..+.|..||+++++++++
T Consensus 103 ~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~---------------~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 103 WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS---------------YQNRILKIDTETDKVVDE 167 (328)
T ss_dssp SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT---------------TCCEEEEEETTTTEEEEE
T ss_pred CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC---------------CCCEEEEEECCCCeEEEE
Confidence 78899999999999999888653110000122333488999997321 247899999999999999
Q ss_pred ecCCCCCCCCcceEEe-CCEEEEeeecC---------CCcEEEEeCCCCcEeEEEecCCc-eecceEEe--CCEEEEEeC
Q 040693 293 TADPSNGTAPGPVTVA-NGVLFGGSTYR---------QGPIYAMDVKTGKILWSYDTGAT-IYGGASVS--NGCIYMGNG 359 (382)
Q Consensus 293 ~~~~~~~~~~~~~~~~-~~~v~~~~~~~---------~g~l~~ld~~tG~ilw~~~~~~~-~~~~p~~~--~g~lyv~~~ 359 (382)
++.... ...+.++ ++.+|+.+.+. .+.|+.+|+++++++.++.++.+ .-...++. +++||++++
T Consensus 168 i~~g~~---p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 168 LTIGIQ---PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp EECSSC---BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS
T ss_pred EEcCCC---ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc
Confidence 887542 1233343 57888877421 26899999999999988877532 22334443 688998876
Q ss_pred ceeEeecCCccCCCCCe
Q 040693 360 YKVTVGFGNKNFTSGTS 376 (382)
Q Consensus 360 ~g~~~~~~~~~~~~g~~ 376 (382)
.++.+|..+++.
T Consensus 245 -----~v~~~d~~t~~~ 256 (328)
T 3dsm_A 245 -----DIWRMPVEADRV 256 (328)
T ss_dssp -----SEEEEETTCSSC
T ss_pred -----EEEEEECCCCce
Confidence 345677766664
No 27
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.36 E-value=6.2e-10 Score=106.20 Aligned_cols=260 Identities=14% Similarity=0.178 Sum_probs=166.3
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKL 81 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~ 81 (382)
+|+++|+.+.....+.. ...+..+| .+..+|++.. .++.|..+|.++|+++++.......
T Consensus 17 ~d~~~~~~~~~~~~~~~-~~~~~~s~--dg~~l~~~~~-------------~d~~i~v~d~~~~~~~~~~~~~~~v---- 76 (391)
T 1l0q_A 17 IDVTSNKVTATIPVGSN-PMGAVISP--DGTKVYVANA-------------HSNDVSIIDTATNNVIATVPAGSSP---- 76 (391)
T ss_dssp EETTTTEEEEEEECSSS-EEEEEECT--TSSEEEEEEG-------------GGTEEEEEETTTTEEEEEEECSSSE----
T ss_pred EECCCCeEEEEeecCCC-cceEEECC--CCCEEEEECC-------------CCCeEEEEECCCCeEEEEEECCCCc----
Confidence 57788888887765432 11111111 1335666543 2789999999999999988763211
Q ss_pred CCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEec
Q 040693 82 NEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQL 161 (382)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~ 161 (382)
....+.+++..++++... ++.|+.+|..+|+.+.....
T Consensus 77 ----------~~~~~spdg~~l~~~~~~--------------------------------~~~v~v~d~~~~~~~~~~~~ 114 (391)
T 1l0q_A 77 ----------QGVAVSPDGKQVYVTNMA--------------------------------SSTLSVIDTTSNTVAGTVKT 114 (391)
T ss_dssp ----------EEEEECTTSSEEEEEETT--------------------------------TTEEEEEETTTTEEEEEEEC
T ss_pred ----------cceEECCCCCEEEEEECC--------------------------------CCEEEEEECCCCeEEEEEeC
Confidence 135677777788776543 37899999999999888764
Q ss_pred CCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCC
Q 040693 162 GGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGG 241 (382)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~ 241 (382)
... +.-..+..+| ..+++.+..++.++.+|..+++.+.......
T Consensus 115 ~~~----------------------------~~~~~~s~dg--~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~------ 158 (391)
T 1l0q_A 115 GKS----------------------------PLGLALSPDG--KKLYVTNNGDKTVSVINTVTKAVINTVSVGR------ 158 (391)
T ss_dssp SSS----------------------------EEEEEECTTS--SEEEEEETTTTEEEEEETTTTEEEEEEECCS------
T ss_pred CCC----------------------------cceEEECCCC--CEEEEEeCCCCEEEEEECCCCcEEEEEecCC------
Confidence 321 2122222333 3344677778999999999999998887532
Q ss_pred cccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeee
Q 040693 242 AMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGST 317 (382)
Q Consensus 242 ~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~ 317 (382)
....... ++..+|+.. ..++.|..+|+++++.+........ ...+.+ ++..++++..
T Consensus 159 ~~~~~~~~~dg~~l~~~~----------------~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVAN----------------FDSMSISVIDTVTNSVIDTVKVEAA---PSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp SEEEEEECTTSSEEEEEE----------------TTTTEEEEEETTTTEEEEEEECSSE---EEEEEECTTSSEEEEEEE
T ss_pred CcceEEECCCCCEEEEEe----------------CCCCEEEEEECCCCeEEEEEecCCC---ccceEECCCCCEEEEEec
Confidence 1122222 556776653 2347899999999998887765431 122223 2457777762
Q ss_pred c-CCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeCceeEeecCCccCCCCCeEEEEE
Q 040693 318 Y-RQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNGYKVTVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 318 ~-~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~~ 381 (382)
. .++.|+.+|.++++++..++..... ....+ .+..||++.+....+.+ +|..+|+.+..+.
T Consensus 220 ~~~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~s~~~d~~v~v--~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 220 DKYFNTVSMIDTGTNKITARIPVGPDP-AGIAVTPDGKKVYVALSFXNTVSV--IDTATNTITATMA 283 (391)
T ss_dssp CSSCCEEEEEETTTTEEEEEEECCSSE-EEEEECTTSSEEEEEETTTTEEEE--EETTTTEEEEEEE
T ss_pred CcCCCcEEEEECCCCeEEEEEecCCCc-cEEEEccCCCEEEEEcCCCCEEEE--EECCCCcEEEEEE
Confidence 1 2789999999999999988775533 23333 24568787654444444 4556688776654
No 28
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.28 E-value=1.9e-09 Score=100.03 Aligned_cols=291 Identities=12% Similarity=0.057 Sum_probs=160.3
Q ss_pred CcCCCCceeeeeecCcC--ccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDH--ARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFG 79 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~--~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~ 79 (382)
+|+.+|+.+++..++.. ....+..+| .+..+|++.. .++.|+.+|+++|+++++........
T Consensus 16 ~d~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~v~~~-------------~~~~v~~~d~~~~~~~~~~~~~~~~~- 79 (337)
T 1pby_B 16 IDTEKMAVDKVITIADAGPTPMVPMVAP--GGRIAYATVN-------------KSESLVKIDLVTGETLGRIDLSTPEE- 79 (337)
T ss_dssp EETTTTEEEEEEECTTCTTCCCCEEECT--TSSEEEEEET-------------TTTEEEEEETTTCCEEEEEECCBTTE-
T ss_pred EECCCCcEEEEEEcCCCCCCccceEEcC--CCCEEEEEeC-------------CCCeEEEEECCCCCeEeeEEcCCccc-
Confidence 68889999988876541 011122222 1236777654 26789999999999999887632100
Q ss_pred CCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEE
Q 040693 80 KLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYK 159 (382)
Q Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~ 159 (382)
.+... ....+++++..+|++.......+. .....++.|+.+|.++++.++..
T Consensus 80 -----~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~---------------------~~~~~~~~i~v~d~~~~~~~~~~ 131 (337)
T 1pby_B 80 -----RVKSL--FGAALSPDGKTLAIYESPVRLELT---------------------HFEVQPTRVALYDAETLSRRKAF 131 (337)
T ss_dssp -----EEECT--TCEEECTTSSEEEEEEEEEEECSS---------------------CEEECCCEEEEEETTTTEEEEEE
T ss_pred -----ccccc--cceEECCCCCEEEEEecccccccc---------------------cccccCceEEEEECCCCcEEEEE
Confidence 00011 246788887788887521000000 00001378999999999999888
Q ss_pred ecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCC
Q 040693 160 QLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLG 239 (382)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~ 239 (382)
...... ... .+..+ +..|++. ++.++.+|.++|++....+.....
T Consensus 132 ~~~~~~-------------------------~~~---~~s~d---g~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~-- 176 (337)
T 1pby_B 132 EAPRQI-------------------------TML---AWARD---GSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE-- 176 (337)
T ss_dssp ECCSSC-------------------------CCE---EECTT---SSCEEEE--SSSEEEEETTTTEEEEEECSTTTT--
T ss_pred eCCCCc-------------------------cee---EECCC---CCEEEEe--CCeEEEEECCCCcEeeeeeccccC--
Confidence 753220 011 11222 2345555 567999999999998777654310
Q ss_pred CCcccceeeeCCeEEEEecCcccc--cccc-----CCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEE--eCC
Q 040693 240 GGAMWGAATDERRIYTNIANSQHK--NFNL-----KPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTV--ANG 310 (382)
Q Consensus 240 g~~~~~~~~~~~~v~~~~~~~~~~--~~~~-----~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~ 310 (382)
....+. .++..+|+........ .+.. .+.........|..+|+++++.. +............+.+ ++.
T Consensus 177 ~~~~~s--~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~ 253 (337)
T 1pby_B 177 AETYAQ--PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKT 253 (337)
T ss_dssp TTTBCC--CBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSS
T ss_pred CCceeC--CCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCC
Confidence 111111 1344444332110000 0000 00000011126899999999987 4443221111112333 245
Q ss_pred EEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeCceeEeecCCccCCCCCeEEEEEC
Q 040693 311 VLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNGYKVTVGFGNKNFTSGTSLYAFCV 382 (382)
Q Consensus 311 ~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~~~ 382 (382)
.+|++ ++.|+.+|.++++++..++.+.... ...+ .+..||++..++. +..+|..+++.+..+.+
T Consensus 254 ~l~~~----~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~---i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 254 RAFGA----YNVLESFDLEKNASIKRVPLPHSYY-SVNVSTDGSTVWLGGALGD---LAAYDAETLEKKGQVDL 319 (337)
T ss_dssp EEEEE----ESEEEEEETTTTEEEEEEECSSCCC-EEEECTTSCEEEEESBSSE---EEEEETTTCCEEEEEEC
T ss_pred EEEEe----CCeEEEEECCCCcCcceecCCCcee-eEEECCCCCEEEEEcCCCc---EEEEECcCCcEEEEEEc
Confidence 67765 4899999999999999988764332 3333 3456888755444 34467778998887753
No 29
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.23 E-value=8.5e-09 Score=100.51 Aligned_cols=252 Identities=12% Similarity=0.153 Sum_probs=165.0
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKL 81 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~ 81 (382)
+|.++|+.+.+...... .+ .+....++.++.+.. ++.|..+|.++|+.+.+......
T Consensus 144 wd~~~~~~~~~~~~h~~---~v-~~~~~~~~~l~s~~~--------------dg~i~vwd~~~~~~~~~~~~h~~----- 200 (445)
T 2ovr_B 144 WSAVTGKCLRTLVGHTG---GV-WSSQMRDNIIISGST--------------DRTLKVWNAETGECIHTLYGHTS----- 200 (445)
T ss_dssp EETTTCCEEEECCCCSS---CE-EEEEEETTEEEEEET--------------TSCEEEEETTTTEEEEEECCCSS-----
T ss_pred EECCCCcEEEEEcCCCC---CE-EEEEecCCEEEEEeC--------------CCeEEEEECCcCcEEEEECCCCC-----
Confidence 35566776665543321 11 123344677777665 89999999999999887653211
Q ss_pred CCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEec
Q 040693 82 NEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQL 161 (382)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~ 161 (382)
.+ ....+ ..+.++.+..+ +.|..+|..+|+.++....
T Consensus 201 ------~v--~~~~~--~~~~l~s~s~d---------------------------------g~i~~wd~~~~~~~~~~~~ 237 (445)
T 2ovr_B 201 ------TV--RCMHL--HEKRVVSGSRD---------------------------------ATLRVWDIETGQCLHVLMG 237 (445)
T ss_dssp ------CE--EEEEE--ETTEEEEEETT---------------------------------SEEEEEESSSCCEEEEEEC
T ss_pred ------cE--EEEEe--cCCEEEEEeCC---------------------------------CEEEEEECCCCcEEEEEcC
Confidence 01 11223 34566665543 8999999999999988765
Q ss_pred CCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCC
Q 040693 162 GGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGG 241 (382)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~ 241 (382)
.... +..+..+ +..++++..++.+..+|..+++.+..+.... .
T Consensus 238 ~~~~-----------------------------v~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~ 280 (445)
T 2ovr_B 238 HVAA-----------------------------VRCVQYD---GRRVVSGAYDFMVKVWDPETETCLHTLQGHT-----N 280 (445)
T ss_dssp CSSC-----------------------------EEEEEEC---SSCEEEEETTSCEEEEEGGGTEEEEEECCCS-----S
T ss_pred Cccc-----------------------------EEEEEEC---CCEEEEEcCCCEEEEEECCCCcEeEEecCCC-----C
Confidence 4321 1111112 4678888899999999999999998886322 1
Q ss_pred cccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCC
Q 040693 242 AMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQG 321 (382)
Q Consensus 242 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g 321 (382)
.......++..++++ ..++.|..+|.++++.+.+...... ....+...++.++.++. +|
T Consensus 281 ~v~~~~~~~~~l~~~-----------------~~d~~i~i~d~~~~~~~~~~~~~~~--~v~~~~~~~~~l~~~~~--dg 339 (445)
T 2ovr_B 281 RVYSLQFDGIHVVSG-----------------SLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNA--DS 339 (445)
T ss_dssp CEEEEEECSSEEEEE-----------------ETTSCEEEEETTTCCEEEEECCCCS--CEEEEEEETTEEEEEET--TS
T ss_pred ceEEEEECCCEEEEE-----------------eCCCeEEEEECCCCCEEEEEcCCcc--cEEEEEEeCCEEEEEeC--CC
Confidence 333333466667666 3458899999999999988865432 23344456788887774 99
Q ss_pred cEEEEeCCCCcEeEEEecCC---ceecceEEeCCEEEEEeCceeEeecCCccCCCCCeEEEE
Q 040693 322 PIYAMDVKTGKILWSYDTGA---TIYGGASVSNGCIYMGNGYKVTVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 322 ~l~~ld~~tG~ilw~~~~~~---~~~~~p~~~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~ 380 (382)
.|..+|..+++.+..+.... ....+....++.|+.++.+|. +.+|. ..+|+.+..+
T Consensus 340 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~-v~iwd--~~~~~~~~~~ 398 (445)
T 2ovr_B 340 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGT-VKLWD--LKTGEFIRNL 398 (445)
T ss_dssp CEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSE-EEEEE--TTTCCEEEEE
T ss_pred eEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCe-EEEEE--CCCCceeeee
Confidence 99999999999999887532 223334445666666666765 44554 4557776654
No 30
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.20 E-value=5.1e-09 Score=99.76 Aligned_cols=221 Identities=15% Similarity=0.200 Sum_probs=145.1
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.++|+++......... ....+.+++..+|+....
T Consensus 11 d~~v~v~d~~~~~~~~~~~~~~~~--------------~~~~~s~dg~~l~~~~~~------------------------ 52 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPVGSNP--------------MGAVISPDGTKVYVANAH------------------------ 52 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECSSSE--------------EEEEECTTSSEEEEEEGG------------------------
T ss_pred CCEEEEEECCCCeEEEEeecCCCc--------------ceEEECCCCCEEEEECCC------------------------
Confidence 889999999999999987753211 135677777778776532
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
++.|..+|..+|+.++....... +.-..+..++ ..+++.+..
T Consensus 53 --------d~~i~v~d~~~~~~~~~~~~~~~----------------------------v~~~~~spdg--~~l~~~~~~ 94 (391)
T 1l0q_A 53 --------SNDVSIIDTATNNVIATVPAGSS----------------------------PQGVAVSPDG--KQVYVTNMA 94 (391)
T ss_dssp --------GTEEEEEETTTTEEEEEEECSSS----------------------------EEEEEECTTS--SEEEEEETT
T ss_pred --------CCeEEEEECCCCeEEEEEECCCC----------------------------ccceEECCCC--CEEEEEECC
Confidence 38999999999999998876532 1112222233 233345556
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
++.++.+|..+++.+....... ......+ ++..+|+.. ..++.|..+|+++++.++
T Consensus 95 ~~~v~v~d~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~----------------~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 95 SSTLSVIDTTSNTVAGTVKTGK------SPLGLALSPDGKKLYVTN----------------NGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECSS------SEEEEEECTTSSEEEEEE----------------TTTTEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCeEEEEEeCCC------CcceEEECCCCCEEEEEe----------------CCCCEEEEEECCCCcEEE
Confidence 7999999999999988877432 1222223 456676653 235789999999999998
Q ss_pred eecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeC---ceeEe
Q 040693 292 STADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNG---YKVTV 364 (382)
Q Consensus 292 ~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~---~g~~~ 364 (382)
....... ...+.+ ++..+|+... .++.|+.+|..+++.+......... ....+ .+..||+++. ++. +
T Consensus 153 ~~~~~~~---~~~~~~~~dg~~l~~~~~-~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~~g~~l~~~~~~~~~~~-v 226 (391)
T 1l0q_A 153 TVSVGRS---PKGIAVTPDGTKVYVANF-DSMSISVIDTVTNSVIDTVKVEAAP-SGIAVNPEGTKAYVTNVDKYFNT-V 226 (391)
T ss_dssp EEECCSS---EEEEEECTTSSEEEEEET-TTTEEEEEETTTTEEEEEEECSSEE-EEEEECTTSSEEEEEEECSSCCE-E
T ss_pred EEecCCC---cceEEECCCCCEEEEEeC-CCCEEEEEECCCCeEEEEEecCCCc-cceEECCCCCEEEEEecCcCCCc-E
Confidence 8876542 122333 2456766543 5789999999999998888765432 22333 3456777763 333 3
Q ss_pred ecCCccCCCCCeEEEE
Q 040693 365 GFGNKNFTSGTSLYAF 380 (382)
Q Consensus 365 ~~~~~~~~~g~~l~~~ 380 (382)
+.+|..+++.+..+
T Consensus 227 --~~~d~~~~~~~~~~ 240 (391)
T 1l0q_A 227 --SMIDTGTNKITARI 240 (391)
T ss_dssp --EEEETTTTEEEEEE
T ss_pred --EEEECCCCeEEEEE
Confidence 33555667766554
No 31
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.18 E-value=4.6e-09 Score=101.56 Aligned_cols=247 Identities=13% Similarity=0.054 Sum_probs=147.6
Q ss_pred cCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCC
Q 040693 31 KGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNL 110 (382)
Q Consensus 31 ~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~ 110 (382)
++.++++... ++.|+.+|.++|+.+........ .. ....+ ....+.++ +.+++....
T Consensus 133 ~~~~~~~~~~-------------~~~i~~~d~~~g~~~~~~~~~~~-~~-----~~~~v--~~~~~~~~-~~~~~s~~~- 189 (433)
T 3bws_A 133 NTRLAIPLLE-------------DEGMDVLDINSGQTVRLSPPEKY-KK-----KLGFV--ETISIPEH-NELWVSQMQ- 189 (433)
T ss_dssp SSEEEEEBTT-------------SSSEEEEETTTCCEEEECCCHHH-HT-----TCCEE--EEEEEGGG-TEEEEEEGG-
T ss_pred CCeEEEEeCC-------------CCeEEEEECCCCeEeeecCcccc-cc-----cCCce--eEEEEcCC-CEEEEEECC-
Confidence 6777776542 67899999999999865432110 00 00011 12344444 445554432
Q ss_pred CCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCC
Q 040693 111 YSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFG 190 (382)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (382)
++.|..+|.++++.+++......
T Consensus 190 -------------------------------d~~v~~~d~~~~~~~~~~~~~~~-------------------------- 212 (433)
T 3bws_A 190 -------------------------------ANAVHVFDLKTLAYKATVDLTGK-------------------------- 212 (433)
T ss_dssp -------------------------------GTEEEEEETTTCCEEEEEECSSS--------------------------
T ss_pred -------------------------------CCEEEEEECCCceEEEEEcCCCC--------------------------
Confidence 38999999999999998874322
Q ss_pred CCceEEEeeeCceeecEE-EEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCcccccccc
Q 040693 191 EAPMMLSMYRNKVKHDIV-VAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNL 267 (382)
Q Consensus 191 ~~p~~~~~~~~g~~~~~v-~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~ 267 (382)
.+.-..+..++ ..+ +.+..++.+..+|..+|+.++.++... ....... ++..+++.......
T Consensus 213 -~~~~~~~~~~~---~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~~~~~~~~~----- 277 (433)
T 3bws_A 213 -WSKILLYDPIR---DLVYCSNWISEDISVIDRKTKLEIRKTDKIG------LPRGLLLSKDGKELYIAQFSASN----- 277 (433)
T ss_dssp -SEEEEEEETTT---TEEEEEETTTTEEEEEETTTTEEEEECCCCS------EEEEEEECTTSSEEEEEEEESCT-----
T ss_pred -CeeEEEEcCCC---CEEEEEecCCCcEEEEECCCCcEEEEecCCC------CceEEEEcCCCCEEEEEECCCCc-----
Confidence 12222233333 345 455578999999999999988876432 1222222 45677776432110
Q ss_pred CCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceec
Q 040693 268 KPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYG 345 (382)
Q Consensus 268 ~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~ 345 (382)
....++.|..+|+++++.+........ ...+.+ +++.+|+... .++.|..+|.++++++...+......
T Consensus 278 ----~~~~dg~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~g~~l~~~~~-~~~~v~v~d~~~~~~~~~~~~~~~~~- 348 (433)
T 3bws_A 278 ----QESGGGRLGIYSMDKEKLIDTIGPPGN---KRHIVSGNTENKIYVSDM-CCSKIEVYDLKEKKVQKSIPVFDKPN- 348 (433)
T ss_dssp ----TCSCCEEEEEEETTTTEEEEEEEEEEC---EEEEEECSSTTEEEEEET-TTTEEEEEETTTTEEEEEEECSSSEE-
T ss_pred ----cccCCCeEEEEECCCCcEEeeccCCCC---cceEEECCCCCEEEEEec-CCCEEEEEECCCCcEEEEecCCCCCC-
Confidence 001357899999999999888754331 112223 2346777643 58999999999999999887654333
Q ss_pred ceEE-e-CCEEEEEeCceeE------------eecCCccCCCCCeEEEEE
Q 040693 346 GASV-S-NGCIYMGNGYKVT------------VGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 346 ~p~~-~-~g~lyv~~~~g~~------------~~~~~~~~~~g~~l~~~~ 381 (382)
...+ . +..||+++..... ..++.+|..+++.+..+.
T Consensus 349 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~ 398 (433)
T 3bws_A 349 TIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE 398 (433)
T ss_dssp EEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE
T ss_pred eEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec
Confidence 3333 2 3467777664221 134556677787776553
No 32
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.11 E-value=1.6e-08 Score=97.64 Aligned_cols=215 Identities=17% Similarity=0.146 Sum_probs=137.1
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.++++.+++....... + ....+.+++..+|+....
T Consensus 190 d~~v~~~d~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~l~~~~~~------------------------ 232 (433)
T 3bws_A 190 ANAVHVFDLKTLAYKATVDLTGKW-----------S--KILLYDPIRDLVYCSNWI------------------------ 232 (433)
T ss_dssp GTEEEEEETTTCCEEEEEECSSSS-----------E--EEEEEETTTTEEEEEETT------------------------
T ss_pred CCEEEEEECCCceEEEEEcCCCCC-----------e--eEEEEcCCCCEEEEEecC------------------------
Confidence 789999999999999987642111 0 235677777788776532
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEc-
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQ- 212 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~- 212 (382)
++.|..+|..+|+.++....... |.-..+..+ +..++++.
T Consensus 233 --------~~~i~~~d~~~~~~~~~~~~~~~----------------------------~~~~~~~~~---g~~l~~~~~ 273 (433)
T 3bws_A 233 --------SEDISVIDRKTKLEIRKTDKIGL----------------------------PRGLLLSKD---GKELYIAQF 273 (433)
T ss_dssp --------TTEEEEEETTTTEEEEECCCCSE----------------------------EEEEEECTT---SSEEEEEEE
T ss_pred --------CCcEEEEECCCCcEEEEecCCCC----------------------------ceEEEEcCC---CCEEEEEEC
Confidence 37899999999999887654321 111222222 23555554
Q ss_pred -------cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 213 -------KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 213 -------~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
.++.++.+|..+|+.+....... ....... ++..+|++. ..++.|..+|
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~~~~----------------~~~~~v~v~d 331 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIGPPG------NKRHIVSGNTENKIYVSD----------------MCCSKIEVYD 331 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEEEEE------CEEEEEECSSTTEEEEEE----------------TTTTEEEEEE
T ss_pred CCCccccCCCeEEEEECCCCcEEeeccCCC------CcceEEECCCCCEEEEEe----------------cCCCEEEEEE
Confidence 47899999999999888764321 1112222 455677653 2357899999
Q ss_pred CCCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecC-------------CCcEEEEeCCCCcEeEEEecCCceecceE
Q 040693 284 ASNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYR-------------QGPIYAMDVKTGKILWSYDTGATIYGGAS 348 (382)
Q Consensus 284 ~~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~-------------~g~l~~ld~~tG~ilw~~~~~~~~~~~p~ 348 (382)
+++++.++....... ...+.+. +..+|++.... +|.|+.+|.++++++..++.... .....
T Consensus 332 ~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~-~~~~~ 407 (433)
T 3bws_A 332 LKEKKVQKSIPVFDK---PNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQ-PTGLD 407 (433)
T ss_dssp TTTTEEEEEEECSSS---EEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSS-EEEEE
T ss_pred CCCCcEEEEecCCCC---CCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCC-CceEE
Confidence 999999988875431 2233333 45777776311 36999999999999998876432 23333
Q ss_pred E--eCCEEEEEeCceeEeecCCcc
Q 040693 349 V--SNGCIYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 349 ~--~~g~lyv~~~~g~~~~~~~~~ 370 (382)
+ .+..|++++.....+.+|.++
T Consensus 408 ~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 408 VSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp ECTTSCEEEEEETTTTEEEEEEET
T ss_pred EcCCCCEEEEEECCCCeEEEEEec
Confidence 3 345666666533334555543
No 33
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.11 E-value=2.9e-08 Score=95.36 Aligned_cols=280 Identities=11% Similarity=0.031 Sum_probs=163.6
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKL 81 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~ 81 (382)
||.+|++++.+.+.+..+ . +..+| .+..+|++.....-+.. -...+.|..||.+|++++-+..+......
T Consensus 64 iD~~t~~v~~~I~vG~~P-~-va~sp--DG~~lyVan~~~~r~~~----G~~~~~VsviD~~t~~v~~~I~v~~g~r~-- 133 (386)
T 3sjl_D 64 IDGEAGRVIGMIDGGFLP-N-PVVAD--DGSFIAHASTVFSRIAR----GERTDYVEVFDPVTLLPTADIELPDAPRF-- 133 (386)
T ss_dssp EETTTTEEEEEEEECSSC-E-EEECT--TSSCEEEEEEEEEETTE----EEEEEEEEEECTTTCCEEEEEEETTCCCC--
T ss_pred EECCCCeEEEEEECCCCC-c-EEECC--CCCEEEEEccccccccc----CCCCCEEEEEECCCCeEEEEEECCCcccc--
Confidence 789999999999876443 2 33333 34568887631000000 00046799999999999999887431100
Q ss_pred CCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEec
Q 040693 82 NEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQL 161 (382)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~ 161 (382)
..|...+ ...+++++.++|+.... ..+.|..||.+|++++-+.+.
T Consensus 134 --~~g~~P~--~~a~spDGk~lyVan~~-------------------------------~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 134 --LVGTYPW--MTSLTPDGKTLLFYQFS-------------------------------PAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp --CBSCCGG--GEEECTTSSEEEEEECS-------------------------------SSCEEEEEETTTTEEEEEEEC
T ss_pred --ccCCCCc--eEEEcCCCCEEEEEEcC-------------------------------CCCeEEEEECCCCcEEEEEEC
Confidence 0111111 36788898999997532 137899999999999998876
Q ss_pred CCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCC-CCeeeeeccCCCCCCC
Q 040693 162 GGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDS-GSLIWSMEAGPGGLGG 240 (382)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~t-G~~~W~~~~~~~~~~g 240 (382)
+... .+. +.| ...++....||.+..++..+ |++.=... ......
T Consensus 179 ~g~~----------------------------~~~---P~g--~~~~~~~~~DG~~~~v~~~~~g~v~~~~~--~~~~~~ 223 (386)
T 3sjl_D 179 PDCY----------------------------HIF---PTA--PDTFFMHCRDGSLAKVAFGTEGTPEITHT--EVFHPE 223 (386)
T ss_dssp CSEE----------------------------EEE---EEE--TTEEEEEETTSCEEEEECCSSSCCEEEEC--CCCSCT
T ss_pred CCcc----------------------------eee---cCC--CceeEEECCCCCEEEEECCCCCeEEEeec--ceeccc
Confidence 5320 011 011 33455666788888888876 77632111 100000
Q ss_pred -Cccc-ceee--eCCe-EEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE----eee-cC----CC-CCCCCcce
Q 040693 241 -GAMW-GAAT--DERR-IYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL----WST-AD----PS-NGTAPGPV 305 (382)
Q Consensus 241 -~~~~-~~~~--~~~~-v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~----W~~-~~----~~-~~~~~~~~ 305 (382)
...+ .+.. .++. +|++ ..++|+.+|..+++.. |.. .. +. .+....++
T Consensus 224 ~~~~~~~~~~~~~dG~~~~vs------------------~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~ 285 (386)
T 3sjl_D 224 DEFLINHPAYSQKAGRLVWPT------------------YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQV 285 (386)
T ss_dssp TSCBCSCCEEETTTTEEEEEB------------------TTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCE
T ss_pred cccccccceeEcCCCcEEEEe------------------CCCEEEEEECCCCcceeecceeccccccccccccCCCccee
Confidence 1111 1222 2444 5553 4588999999887532 321 00 00 00012234
Q ss_pred EE--eCCEEEEeeec--------CCCcEEEEeCCCCcEeEEEecCCceecceEEeCC--EEEEEeCceeEeecCCccCCC
Q 040693 306 TV--ANGVLFGGSTY--------RQGPIYAMDVKTGKILWSYDTGATIYGGASVSNG--CIYMGNGYKVTVGFGNKNFTS 373 (382)
Q Consensus 306 ~~--~~~~v~~~~~~--------~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~~g--~lyv~~~~g~~~~~~~~~~~~ 373 (382)
.+ +++++|+.... ....|++||.+|+|++-+++++...++-.+-.++ +||+++..... +.-+|..+
T Consensus 286 a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~--VsViD~~t 363 (386)
T 3sjl_D 286 AYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKT--LYIHDAES 363 (386)
T ss_dssp EEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTE--EEEEETTT
T ss_pred eECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCe--EEEEECCC
Confidence 44 35799998631 1257999999999999999987654433333454 58888763332 34578889
Q ss_pred CCeEEEEE
Q 040693 374 GTSLYAFC 381 (382)
Q Consensus 374 g~~l~~~~ 381 (382)
++.+-+..
T Consensus 364 ~k~~~~i~ 371 (386)
T 3sjl_D 364 GEELRSVN 371 (386)
T ss_dssp CCEEEEEC
T ss_pred CcEEEEec
Confidence 99886653
No 34
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.09 E-value=5.4e-08 Score=94.77 Aligned_cols=229 Identities=16% Similarity=0.200 Sum_probs=156.3
Q ss_pred EEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcC
Q 040693 29 YYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATG 108 (382)
Q Consensus 29 v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~ 108 (382)
..++.++.+.. ++.|..+|..+|+.+.++.... ..++ ...++ ++.++.+..
T Consensus 127 ~~g~~l~sg~~--------------dg~i~vwd~~~~~~~~~~~~h~-----------~~v~--~~~~~--~~~l~s~~~ 177 (445)
T 2ovr_B 127 FCGNRIVSGSD--------------DNTLKVWSAVTGKCLRTLVGHT-----------GGVW--SSQMR--DNIIISGST 177 (445)
T ss_dssp EETTEEEEEET--------------TSCEEEEETTTCCEEEECCCCS-----------SCEE--EEEEE--TTEEEEEET
T ss_pred EcCCEEEEEEC--------------CCcEEEEECCCCcEEEEEcCCC-----------CCEE--EEEec--CCEEEEEeC
Confidence 34666666664 8999999999999988765311 1111 22333 346666554
Q ss_pred CCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCC
Q 040693 109 NLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDAD 188 (382)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (382)
+ +.|..+|..+|+.+.++......
T Consensus 178 d---------------------------------g~i~vwd~~~~~~~~~~~~h~~~----------------------- 201 (445)
T 2ovr_B 178 D---------------------------------RTLKVWNAETGECIHTLYGHTST----------------------- 201 (445)
T ss_dssp T---------------------------------SCEEEEETTTTEEEEEECCCSSC-----------------------
T ss_pred C---------------------------------CeEEEEECCcCcEEEEECCCCCc-----------------------
Confidence 3 89999999999998877643221
Q ss_pred CCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccC
Q 040693 189 FGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLK 268 (382)
Q Consensus 189 ~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 268 (382)
+..+.. .+..+++++.++.+..+|..+++.++...... ........++..++++
T Consensus 202 ------v~~~~~---~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~-----~~v~~~~~~~~~l~~~------------ 255 (445)
T 2ovr_B 202 ------VRCMHL---HEKRVVSGSRDATLRVWDIETGQCLHVLMGHV-----AAVRCVQYDGRRVVSG------------ 255 (445)
T ss_dssp ------EEEEEE---ETTEEEEEETTSEEEEEESSSCCEEEEEECCS-----SCEEEEEECSSCEEEE------------
T ss_pred ------EEEEEe---cCCEEEEEeCCCEEEEEECCCCcEEEEEcCCc-----ccEEEEEECCCEEEEE------------
Confidence 111111 14678899999999999999999998876432 1223333366666666
Q ss_pred CCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceE
Q 040693 269 PSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGAS 348 (382)
Q Consensus 269 ~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~ 348 (382)
..++.|..+|+++++.+.+...... ....+..++..++.++. ++.|..+|..+++.+..+...........
T Consensus 256 -----~~dg~i~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~v~~~~ 326 (445)
T 2ovr_B 256 -----AYDFMVKVWDPETETCLHTLQGHTN--RVYSLQFDGIHVVSGSL--DTSIRVWDVETGNCIHTLTGHQSLTSGME 326 (445)
T ss_dssp -----ETTSCEEEEEGGGTEEEEEECCCSS--CEEEEEECSSEEEEEET--TSCEEEEETTTCCEEEEECCCCSCEEEEE
T ss_pred -----cCCCEEEEEECCCCcEeEEecCCCC--ceEEEEECCCEEEEEeC--CCeEEEEECCCCCEEEEEcCCcccEEEEE
Confidence 3458899999999999988875432 22334456677777774 99999999999999998875554444555
Q ss_pred EeCCEEEEEeCceeEeecCCccCCCCCeEEEE
Q 040693 349 VSNGCIYMGNGYKVTVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 349 ~~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~ 380 (382)
..++.|++++.+|. +.+| |..+|+.+..+
T Consensus 327 ~~~~~l~~~~~dg~-i~vw--d~~~~~~~~~~ 355 (445)
T 2ovr_B 327 LKDNILVSGNADST-VKIW--DIKTGQCLQTL 355 (445)
T ss_dssp EETTEEEEEETTSC-EEEE--ETTTCCEEEEE
T ss_pred EeCCEEEEEeCCCe-EEEE--ECCCCcEEEEE
Confidence 67777777777765 3444 45567777665
No 35
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.07 E-value=4.5e-08 Score=91.17 Aligned_cols=231 Identities=13% Similarity=0.124 Sum_probs=135.3
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|+.+|.++|+++++......... ..+.+.+++..+|+....
T Consensus 20 ~~~v~~~d~~~~~~~~~~~~~~~~~~------------~~~~~s~dg~~~~v~~~~------------------------ 63 (349)
T 1jmx_B 20 PNNLHVVDVASDTVYKSCVMPDKFGP------------GTAMMAPDNRTAYVLNNH------------------------ 63 (349)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCSS------------CEEEECTTSSEEEEEETT------------------------
T ss_pred CCeEEEEECCCCcEEEEEecCCCCCC------------ceeEECCCCCEEEEEeCC------------------------
Confidence 78999999999999999876421000 135677777778876532
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
++.|+.+|+++|+.+++........- ....|.-..+.++ +..++++..
T Consensus 64 --------~~~i~~~d~~t~~~~~~~~~~~~~~~---------------------~~~~~~~~~~spd---g~~l~~~~~ 111 (349)
T 1jmx_B 64 --------YGDIYGIDLDTCKNTFHANLSSVPGE---------------------VGRSMYSFAISPD---GKEVYATVN 111 (349)
T ss_dssp --------TTEEEEEETTTTEEEEEEESCCSTTE---------------------EEECSSCEEECTT---SSEEEEEEE
T ss_pred --------CCcEEEEeCCCCcEEEEEEccccccc---------------------ccccccceEECCC---CCEEEEEcc
Confidence 37899999999999998876431000 0001111112222 245555554
Q ss_pred C------------cEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEE
Q 040693 214 S------------GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWV 280 (382)
Q Consensus 214 ~------------g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~ 280 (382)
+ +.++.+|.++|+.......... .. ....... .++.+|+.. +.|.
T Consensus 112 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~-~~~~~~~s~dg~l~~~~-------------------~~i~ 169 (349)
T 1jmx_B 112 PTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM--PR-QVYLMRAADDGSLYVAG-------------------PDIY 169 (349)
T ss_dssp EEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC--CS-SCCCEEECTTSCEEEES-------------------SSEE
T ss_pred cccccccccccCCCeEEEEECCCccccceeeeccC--CC-cccceeECCCCcEEEcc-------------------CcEE
Confidence 3 7899999998665432221100 00 1111112 233377641 3388
Q ss_pred EEECCCCcEEeeecCCCCCCC---------------C-------------------------------------------
Q 040693 281 AMDASNGNVLWSTADPSNGTA---------------P------------------------------------------- 302 (382)
Q Consensus 281 a~d~~tG~~~W~~~~~~~~~~---------------~------------------------------------------- 302 (382)
.+|+++|+.+.+.+....... .
T Consensus 170 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (349)
T 1jmx_B 170 KMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQE 249 (349)
T ss_dssp EECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEE
T ss_pred EEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecc
Confidence 888888888877654320000 0
Q ss_pred ------cc--eE--E-eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeCceeEeecCCc
Q 040693 303 ------GP--VT--V-ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNGYKVTVGFGNK 369 (382)
Q Consensus 303 ------~~--~~--~-~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~g~~~~~~~~ 369 (382)
.+ +. - ++..+|++ ++.|+.+|+++++++.+.+.+.... ...+ .+++||++..++. +.-+
T Consensus 250 ~~~~~~~~~~~~~sp~dg~~l~~~----~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~---v~v~ 321 (349)
T 1jmx_B 250 FADLTELYFTGLRSPKDPNQIYGV----LNRLAKYDLKQRKLIKAANLDHTYY-CVAFDKKGDKLYLGGTFND---LAVF 321 (349)
T ss_dssp EEECSSCEEEEEECSSCTTEEEEE----ESEEEEEETTTTEEEEEEECSSCCC-EEEECSSSSCEEEESBSSE---EEEE
T ss_pred cccCCCcceeeEecCCCCCEEEEE----cCeEEEEECccCeEEEEEcCCCCcc-ceEECCCCCEEEEecCCCe---EEEE
Confidence 00 00 1 34466665 4789999999999998887665332 3333 3467888655543 3446
Q ss_pred cCCCCCeEEEEEC
Q 040693 370 NFTSGTSLYAFCV 382 (382)
Q Consensus 370 ~~~~g~~l~~~~~ 382 (382)
|..+++.+..+.+
T Consensus 322 d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 322 NPDTLEKVKNIKL 334 (349)
T ss_dssp ETTTTEEEEEEEC
T ss_pred eccccceeeeeec
Confidence 7778888877653
No 36
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.05 E-value=3.3e-08 Score=89.52 Aligned_cols=162 Identities=15% Similarity=0.227 Sum_probs=115.7
Q ss_pred ceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEc-cCcEEEEEe
Q 040693 143 NSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQ-KSGFAWALD 221 (382)
Q Consensus 143 g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~-~~g~l~ald 221 (382)
+.|..+|++|||++-+. +.+.. + -..+... ++.||+.+ .++.++.+|
T Consensus 75 g~v~~iD~~Tgkv~~~~-l~~~~-F---------------------------geGit~~---g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 75 GTLRQLSLESAQPVWME-RLGNI-F---------------------------AEGLASD---GERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp TEEEECCSSCSSCSEEE-ECTTC-C---------------------------EEEEEEC---SSCEEEEESSSCEEEEEE
T ss_pred CEEEEEECCCCcEEeEE-CCCCc-c---------------------------eeEEEEe---CCEEEEEEccCCEEEEEE
Confidence 67999999999999998 55431 0 0111111 34566554 467999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCC
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTA 301 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~ 301 (382)
++|++++-+++.+. .-|+...+++.+|++ +.++.|+.+|++|.+++=++........
T Consensus 123 ~~Tl~~~~ti~~~~------eGwGLt~Dg~~L~vS-----------------dGs~~l~~iDp~T~~v~~~I~V~~~g~~ 179 (268)
T 3nok_A 123 GMPPQRERTTRYSG------EGWGLCYWNGKLVRS-----------------DGGTMLTFHEPDGFALVGAVQVKLRGQP 179 (268)
T ss_dssp TTTTEEEEEEECSS------CCCCEEEETTEEEEE-----------------CSSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred CCcCcEEEEEeCCC------ceeEEecCCCEEEEE-----------------CCCCEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 99999999998643 336766789999998 4468899999999999988876442111
Q ss_pred C---cceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC-------------ceecceEEe--CCEEEEEeCc
Q 040693 302 P---GPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA-------------TIYGGASVS--NGCIYMGNGY 360 (382)
Q Consensus 302 ~---~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~-------------~~~~~p~~~--~g~lyv~~~~ 360 (382)
. .-+...++.+|+... ....|..||++||+++-+.++++ ......++. .++|||+.-.
T Consensus 180 v~~lNeLe~~dG~lyanvw-~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 180 VELINELECANGVIYANIW-HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp CCCEEEEEEETTEEEEEET-TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred cccccccEEeCCEEEEEEC-CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 1 123345889998874 67899999999999999998752 133444553 5788887544
No 37
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.05 E-value=3.5e-08 Score=89.23 Aligned_cols=164 Identities=15% Similarity=0.229 Sum_probs=118.2
Q ss_pred ceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc-CcEEEEEe
Q 040693 143 NSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK-SGFAWALD 221 (382)
Q Consensus 143 g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~-~g~l~ald 221 (382)
+.|..+|++||+++-+..+.+.. +...-.+. ++.||+.+. ++.++.+|
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~-----------------------FgeGit~~--------g~~ly~ltw~~~~v~v~D 113 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRY-----------------------FGEGISDW--------KDKIVGLTWKNGLGFVWN 113 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTC-----------------------CEEEEEEE--------TTEEEEEESSSSEEEEEE
T ss_pred ceEEEEECCCCcEEEEEecCCcc-----------------------ceeEEEEe--------CCEEEEEEeeCCEEEEEE
Confidence 58999999999999998776431 00111111 467777654 67999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCC--C
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSN--G 299 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~--~ 299 (382)
++|++++-+++.+. .-|+...+++.+|++ +.++.|+.+|++|.+++=++..... .
T Consensus 114 ~~t~~~~~ti~~~~------eG~glt~dg~~L~~S-----------------dGs~~i~~iDp~T~~v~~~I~V~~~g~~ 170 (262)
T 3nol_A 114 IRNLRQVRSFNYDG------EGWGLTHNDQYLIMS-----------------DGTPVLRFLDPESLTPVRTITVTAHGEE 170 (262)
T ss_dssp TTTCCEEEEEECSS------CCCCEEECSSCEEEC-----------------CSSSEEEEECTTTCSEEEEEECEETTEE
T ss_pred CccCcEEEEEECCC------CceEEecCCCEEEEE-----------------CCCCeEEEEcCCCCeEEEEEEeccCCcc
Confidence 99999999998753 336666688899997 3457899999999999988887431 1
Q ss_pred CCC-cceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCc------------eecceEEe--CCEEEEEeCce
Q 040693 300 TAP-GPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGAT------------IYGGASVS--NGCIYMGNGYK 361 (382)
Q Consensus 300 ~~~-~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~------------~~~~p~~~--~g~lyv~~~~g 361 (382)
... .-+...++.+|+... ....|+.||++||+++-+.++++- .....++. .++|||+.-..
T Consensus 171 ~~~lNELe~~~G~lyan~w-~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 171 LPELNELEWVDGEIFANVW-QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp CCCEEEEEEETTEEEEEET-TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred ccccceeEEECCEEEEEEc-cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 111 114456889998874 678999999999999999988631 22444553 58888886554
No 38
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.04 E-value=1.4e-07 Score=87.31 Aligned_cols=227 Identities=15% Similarity=0.120 Sum_probs=134.4
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.++|+++++........ . ...+.+++++..+|+....
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~~---------~--~~~~~~s~dg~~l~v~~~~------------------------ 54 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAGP---------T--PMVPMVAPGGRIAYATVNK------------------------ 54 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCTT---------C--CCCEEECTTSSEEEEEETT------------------------
T ss_pred CCeEEEEECCCCcEEEEEEcCCCCC---------C--ccceEEcCCCCEEEEEeCC------------------------
Confidence 8899999999999999987642100 0 0246788887788887643
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEc-
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQ- 212 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~- 212 (382)
++.|+.+|+.+|+.+++......... ...|.-..+..+ +..+++..
T Consensus 55 --------~~~v~~~d~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~s~d---g~~l~~~~~ 101 (337)
T 1pby_B 55 --------SESLVKIDLVTGETLGRIDLSTPEER----------------------VKSLFGAALSPD---GKTLAIYES 101 (337)
T ss_dssp --------TTEEEEEETTTCCEEEEEECCBTTEE----------------------EECTTCEEECTT---SSEEEEEEE
T ss_pred --------CCeEEEEECCCCCeEeeEEcCCcccc----------------------cccccceEECCC---CCEEEEEec
Confidence 37899999999999998876531000 001111112222 23555553
Q ss_pred -----------cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceE
Q 040693 213 -----------KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGW 279 (382)
Q Consensus 213 -----------~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v 279 (382)
.++.++.+|.++++.++.+..+.. .....+ ++..+|+. ++.|
T Consensus 102 ~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~-------------------~~~i 156 (337)
T 1pby_B 102 PVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ------ITMLAWARDGSKLYGL-------------------GRDL 156 (337)
T ss_dssp EEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS------CCCEEECTTSSCEEEE-------------------SSSE
T ss_pred ccccccccccccCceEEEEECCCCcEEEEEeCCCC------cceeEECCCCCEEEEe-------------------CCeE
Confidence 468899999999999988875321 112222 56667775 2569
Q ss_pred EEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeec------------CCC----------cEEEEeCCCCcEeEEE
Q 040693 280 VAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTY------------RQG----------PIYAMDVKTGKILWSY 337 (382)
Q Consensus 280 ~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~------------~~g----------~l~~ld~~tG~ilw~~ 337 (382)
+.+|+++|+............ .....-++..+|+.... ..+ .|+.+|++++++. ..
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~ 234 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWEA-ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MR 234 (337)
T ss_dssp EEEETTTTEEEEEECSTTTTT-TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EE
T ss_pred EEEECCCCcEeeeeeccccCC-CceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-Ee
Confidence 999999999988876543111 11111123333333210 011 5789999999986 44
Q ss_pred ecCC--ceecceEE--eCCEEEEEeCceeEeecCCccCCCCCeEEEE
Q 040693 338 DTGA--TIYGGASV--SNGCIYMGNGYKVTVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 338 ~~~~--~~~~~p~~--~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~ 380 (382)
.... .......+ .+..||++ ++. ++.+|..+++.+..+
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~--~~~---v~~~d~~~~~~~~~~ 276 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGA--YNV---LESFDLEKNASIKRV 276 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE--ESE---EEEEETTTTEEEEEE
T ss_pred ecCCCCCceeeEEECCCCCEEEEe--CCe---EEEEECCCCcCccee
Confidence 3321 11112222 34466666 322 344666677776654
No 39
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.04 E-value=9.9e-08 Score=88.57 Aligned_cols=256 Identities=10% Similarity=0.129 Sum_probs=141.1
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEE--cCEEEEeccCccccccccccccccceEEEEeCccCce-eeeeeccCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYY--KGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRI-LWQTFMLPDNF 78 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~-lW~~~~~~~~~ 78 (382)
+|+++|+++.....+.... ...+. +..+|++... ++.|+.+|+++|++ +.........
T Consensus 25 ~d~~~~~~~~~~~~~~~~~-----~~~~s~dg~~l~~~~~~-------------~~~i~~~d~~~~~~~~~~~~~~~~~- 85 (331)
T 3u4y_A 25 FSTDTLEILNQITLGYDFV-----DTAITSDCSNVVVTSDF-------------CQTLVQIETQLEPPKVVAIQEGQSS- 85 (331)
T ss_dssp EETTTCCEEEEEECCCCEE-----EEEECSSSCEEEEEEST-------------TCEEEEEECSSSSCEEEEEEECSSC-
T ss_pred EeCcccceeeeEEccCCcc-----eEEEcCCCCEEEEEeCC-------------CCeEEEEECCCCceeEEecccCCCC-
Confidence 5778888877766532111 22222 3357776642 67899999999998 5555442111
Q ss_pred CCCCCCcCccccCCC-ceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEE
Q 040693 79 GKLNEYAGAAIWGSS-PSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVW 157 (382)
Q Consensus 79 ~~~~~~~g~~~~~~~-~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W 157 (382)
.. ..+++++..+|+.... ...+.|..+|.++|+.+.
T Consensus 86 -------------~~~~~~s~dg~~l~~~~~~------------------------------~~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 86 -------------MADVDITPDDQFAVTVTGL------------------------------NHPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp -------------CCCEEECTTSSEEEECCCS------------------------------SSSCEEEEEETTTTEEEE
T ss_pred -------------ccceEECCCCCEEEEecCC------------------------------CCcccEEEEECCCCCeEE
Confidence 13 5778887888843321 001289999999999887
Q ss_pred EEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcE-EEEEeCCCCCeeeeeccCCC
Q 040693 158 YKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGF-AWALDRDSGSLIWSMEAGPG 236 (382)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~-l~ald~~tG~~~W~~~~~~~ 236 (382)
...... .|.-..+.++| +.+++....++. +..++......+.... ...
T Consensus 123 ~~~~~~----------------------------~~~~~~~spdg--~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~~~ 171 (331)
T 3u4y_A 123 TIPIPY----------------------------DAVGIAISPNG--NGLILIDRSSANTVRRFKIDADGVLFDTG-QEF 171 (331)
T ss_dssp EEECCT----------------------------TEEEEEECTTS--SCEEEEEETTTTEEEEEEECTTCCEEEEE-EEE
T ss_pred EEECCC----------------------------CccceEECCCC--CEEEEEecCCCceEEEEEECCCCcEeecC-Ccc
Confidence 765432 12222223333 223333344455 6655555433322211 000
Q ss_pred CCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcE---EeeecCCCCCCCCcceEE--eC
Q 040693 237 GLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNV---LWSTADPSNGTAPGPVTV--AN 309 (382)
Q Consensus 237 ~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~---~W~~~~~~~~~~~~~~~~--~~ 309 (382)
...+.......+ ++..+|+... ..+.|..+|+++|+. +-+.+.... ...+.+ ++
T Consensus 172 ~~~~~~~~~~~~spdg~~l~v~~~----------------~~~~v~v~d~~~~~~~~~~~~~~~~~~---~~~~~~spdg 232 (331)
T 3u4y_A 172 ISGGTRPFNITFTPDGNFAFVANL----------------IGNSIGILETQNPENITLLNAVGTNNL---PGTIVVSRDG 232 (331)
T ss_dssp ECSSSSEEEEEECTTSSEEEEEET----------------TTTEEEEEECSSTTSCEEEEEEECSSC---CCCEEECTTS
T ss_pred ccCCCCccceEECCCCCEEEEEeC----------------CCCeEEEEECCCCcccceeeeccCCCC---CceEEECCCC
Confidence 001111122222 4556777632 357899999999998 766665431 223334 34
Q ss_pred CEEEEeeecCCCcEEEEeCCCCcE--eEEEecC----Cc-eec--ceEE--eCCEEEEEeCceeEeecCCcc
Q 040693 310 GVLFGGSTYRQGPIYAMDVKTGKI--LWSYDTG----AT-IYG--GASV--SNGCIYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 310 ~~v~~~~~~~~g~l~~ld~~tG~i--lw~~~~~----~~-~~~--~p~~--~~g~lyv~~~~g~~~~~~~~~ 370 (382)
..+|++.. .++.|+.+|.++|++ +..+... .. ... ...+ .+..||+++.++..+.+|.++
T Consensus 233 ~~l~v~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 233 STVYVLTE-STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp SEEEEECS-SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CEEEEEEc-CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence 56777763 357799999999998 4333322 11 111 1222 455788888776555565554
No 40
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.02 E-value=2e-07 Score=94.01 Aligned_cols=254 Identities=11% Similarity=0.030 Sum_probs=154.8
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeC--ccCceeeeeeccCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDA--KTGRILWQTFMLPDNFG 79 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~--~tG~~lW~~~~~~~~~~ 79 (382)
+|.++|+++.+...+.. ...+..+| .+..+|++.. ++.|..+|. +|++++-+...+..
T Consensus 164 ~D~~t~~~~~~i~~g~~-~~~v~~sp--dg~~l~v~~~--------------d~~V~v~D~~~~t~~~~~~i~~g~~--- 223 (543)
T 1nir_A 164 VDGDSKKIVKVIDTGYA-VHISRMSA--SGRYLLVIGR--------------DARIDMIDLWAKEPTKVAEIKIGIE--- 223 (543)
T ss_dssp EETTTCCEEEEEECSTT-EEEEEECT--TSCEEEEEET--------------TSEEEEEETTSSSCEEEEEEECCSE---
T ss_pred EECCCceEEEEEecCcc-cceEEECC--CCCEEEEECC--------------CCeEEEEECcCCCCcEEEEEecCCC---
Confidence 57888888877765321 11122222 3457888775 789999999 89999887765211
Q ss_pred CCCCCcCccccCCCceeeC----CCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcE
Q 040693 80 KLNEYAGAAIWGSSPSIDP----IRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKI 155 (382)
Q Consensus 80 ~~~~~~g~~~~~~~~~~~~----~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~ 155 (382)
. ....+++ ++.++|++... ++.|..+|..|+++
T Consensus 224 ---------p--~~va~sp~~~~dg~~l~v~~~~--------------------------------~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 224 ---------A--RSVESSKFKGYEDRYTIAGAYW--------------------------------PPQFAIMDGETLEP 260 (543)
T ss_dssp ---------E--EEEEECCSTTCTTTEEEEEEEE--------------------------------SSEEEEEETTTCCE
T ss_pred ---------c--ceEEeCCCcCCCCCEEEEEEcc--------------------------------CCeEEEEecccccc
Confidence 1 1356777 78889987642 37899999999999
Q ss_pred EEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEe--eeCceeecEEEEEccCcEEEEEeCCCCCeeeeecc
Q 040693 156 VWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSM--YRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEA 233 (382)
Q Consensus 156 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~ 233 (382)
+...+........ ..+...|.+..+ ..++ ...++....++.+..+|..+++.+.....
T Consensus 261 ~~~i~~~g~~~~~------------------~~~~~~~~v~~i~~s~~~--~~~~vs~~~~g~i~vvd~~~~~~l~~~~i 320 (543)
T 1nir_A 261 KQIVSTRGMTVDT------------------QTYHPEPRVAAIIASHEH--PEFIVNVKETGKVLLVNYKDIDNLTVTSI 320 (543)
T ss_dssp EEEEECCEECSSS------------------CCEESCCCEEEEEECSSS--SEEEEEETTTTEEEEEECTTSSSCEEEEE
T ss_pred ceeecccCcccCc------------------cccccCCceEEEEECCCC--CEEEEEECCCCeEEEEEecCCCcceeEEe
Confidence 9988764321000 000012223322 2223 34566667789999999999876652222
Q ss_pred CCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCC-CcceEE-e-
Q 040693 234 GPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTA-PGPVTV-A- 308 (382)
Q Consensus 234 ~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~-~~~~~~-~- 308 (382)
+. +......++ ++..+|++.. .+++|..+|.++|+++.+.+....+.. .+...+ .
T Consensus 321 ~~----~~~~~~~~~spdg~~l~va~~----------------~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~ 380 (543)
T 1nir_A 321 GA----APFLHDGGWDSSHRYFMTAAN----------------NSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPK 380 (543)
T ss_dssp EC----CSSCCCEEECTTSCEEEEEEG----------------GGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETT
T ss_pred cc----CcCccCceECCCCCEEEEEec----------------CCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCC
Confidence 11 111122222 5666776532 347899999999999988876432111 122222 2
Q ss_pred CCEEEEeeecCCCcEEEEeCCC-------CcEeEEEecCCceecceE--EeCCEEEEEe
Q 040693 309 NGVLFGGSTYRQGPIYAMDVKT-------GKILWSYDTGATIYGGAS--VSNGCIYMGN 358 (382)
Q Consensus 309 ~~~v~~~~~~~~g~l~~ld~~t-------G~ilw~~~~~~~~~~~p~--~~~g~lyv~~ 358 (382)
++.+|+.....++.|..+|.++ ++++-+++..+....... ..+..||+.+
T Consensus 381 ~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 381 YGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred CccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 3678876532368899999988 888888876542211111 1456778775
No 41
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.01 E-value=1.5e-07 Score=91.52 Aligned_cols=249 Identities=10% Similarity=0.010 Sum_probs=150.4
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKL 81 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~ 81 (382)
+|.++++.++......... . .....++.++++.. +|.|..+|.++|+.+.+......
T Consensus 158 wd~~~~~~~~~~~~h~~~v--~--~l~~~~~~l~sg~~--------------dg~i~vwd~~~~~~~~~~~~h~~----- 214 (435)
T 1p22_A 158 WDKNTLECKRILTGHTGSV--L--CLQYDERVIITGSS--------------DSTVRVWDVNTGEMLNTLIHHCE----- 214 (435)
T ss_dssp EESSSCCEEEEECCCSSCE--E--EEECCSSEEEEEET--------------TSCEEEEESSSCCEEEEECCCCS-----
T ss_pred EeCCCCeEEEEEcCCCCcE--E--EEEECCCEEEEEcC--------------CCeEEEEECCCCcEEEEEcCCCC-----
Confidence 3556677666655332211 1 11124455666654 89999999999998877653111
Q ss_pred CCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEec
Q 040693 82 NEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQL 161 (382)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~ 161 (382)
. ...+.-..+.++.+..+ +.|..+|..+++.......
T Consensus 215 ------~----v~~l~~~~~~l~s~s~d---------------------------------g~i~vwd~~~~~~~~~~~~ 251 (435)
T 1p22_A 215 ------A----VLHLRFNNGMMVTCSKD---------------------------------RSIAVWDMASPTDITLRRV 251 (435)
T ss_dssp ------C----EEEEECCTTEEEEEETT---------------------------------SCEEEEECSSSSCCEEEEE
T ss_pred ------c----EEEEEEcCCEEEEeeCC---------------------------------CcEEEEeCCCCCCceeeeE
Confidence 0 11222234566665543 8899999998887643322
Q ss_pred CCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCC
Q 040693 162 GGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGG 241 (382)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~ 241 (382)
.... ..+ +..+.. .+..+++++.++.+..+|..+++.+..+.... .
T Consensus 252 ~~~~-------------------------~~~-v~~~~~---~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-----~ 297 (435)
T 1p22_A 252 LVGH-------------------------RAA-VNVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK-----R 297 (435)
T ss_dssp ECCC-------------------------SSC-EEEEEE---ETTEEEEEETTSEEEEEETTTCCEEEEEECCS-----S
T ss_pred ecCC-------------------------CCc-EEEEEe---CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCC-----C
Confidence 2110 111 111211 25788899999999999999999998877432 1
Q ss_pred cccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCC
Q 040693 242 AMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQG 321 (382)
Q Consensus 242 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g 321 (382)
.......++..++++ ..++.|..+|.++|+.+.+...... ....+..++.+++.++. +|
T Consensus 298 ~v~~~~~~~~~l~~g-----------------~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~~~~~l~sg~~--dg 356 (435)
T 1p22_A 298 GIACLQYRDRLVVSG-----------------SSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAY--DG 356 (435)
T ss_dssp CEEEEEEETTEEEEE-----------------ETTSCEEEEETTTCCEEEEECCCSS--CEEEEECCSSEEEEEET--TS
T ss_pred cEEEEEeCCCEEEEE-----------------eCCCeEEEEECCCCCEEEEEeCCcC--cEEEEEecCCEEEEEeC--CC
Confidence 223333466777776 3458899999999999988875432 22334446677777774 99
Q ss_pred cEEEEeCCCCc---------EeEEEecCCceecceEEeCCEEEEEeCceeEeecCCccCC
Q 040693 322 PIYAMDVKTGK---------ILWSYDTGATIYGGASVSNGCIYMGNGYKVTVGFGNKNFT 372 (382)
Q Consensus 322 ~l~~ld~~tG~---------ilw~~~~~~~~~~~p~~~~g~lyv~~~~g~~~~~~~~~~~ 372 (382)
.|..+|..+++ .+..+.............+..|+.++.+ ..+.+|.++..
T Consensus 357 ~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~D-g~i~iwd~~~~ 415 (435)
T 1p22_A 357 KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHD-DTILIWDFLND 415 (435)
T ss_dssp CEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSS-SEEEEEC----
T ss_pred cEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCC-CEEEEEECCCC
Confidence 99999988766 6666654444444445544444444445 44677777653
No 42
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.99 E-value=1.1e-07 Score=92.62 Aligned_cols=279 Identities=9% Similarity=0.010 Sum_probs=163.8
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeecc-CCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFML-PDNFGK 80 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~-~~~~~~ 80 (382)
||++|++++.+.+++..+ .+..+| .+..+||+......... -...+.|..||.+|++++-+..+. +...
T Consensus 104 ID~~t~~vv~~I~vG~~P--gia~Sp--Dgk~lyVan~~~~~~~~----G~~~~~VsviD~~t~~vv~~I~v~g~~r~-- 173 (426)
T 3c75_H 104 IDGSTGRILGMTDGGFLP--HPVAAE--DGSFFAQASTVFERIAR----GKRTDYVEVFDPVTFLPIADIELPDAPRF-- 173 (426)
T ss_dssp EETTTTEEEEEEEECSSC--EEEECT--TSSCEEEEEEEEEETTE----EEEEEEEEEECTTTCCEEEEEEETTCCCC--
T ss_pred EECCCCEEEEEEECCCCC--ceEECC--CCCEEEEEecccccccc----CCCCCEEEEEECCCCcEEEEEECCCcccc--
Confidence 789999999999986543 232233 35678887631000000 000568999999999999988874 1110
Q ss_pred CCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEe
Q 040693 81 LNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQ 160 (382)
Q Consensus 81 ~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~ 160 (382)
..+... ....+++++.++|+.... ..+.|..||.++++++-+++
T Consensus 174 ---~~g~~P--~~~~~spDGk~lyV~n~~-------------------------------~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 174 ---LVGTYQ--WMNALTPDNKNLLFYQFS-------------------------------PAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp ---CBSCCG--GGSEECTTSSEEEEEECS-------------------------------SSCEEEEEETTTTEEEEEEE
T ss_pred ---ccCCCc--ceEEEcCCCCEEEEEecC-------------------------------CCCeEEEEECCCCeEEEEEE
Confidence 001111 135788899999997532 12789999999999999887
Q ss_pred cCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCC
Q 040693 161 LGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGG 240 (382)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g 240 (382)
.+.. ..+. .+| ...++....+|.+..+|..++++.+... .......
T Consensus 218 v~g~----------------------------~~~~---p~g--~~~~v~~~~dG~~~~V~~~~~~v~~~~~-~~~~v~~ 263 (426)
T 3c75_H 218 VPDC----------------------------YHIF---PAS--PTVFYMNCRDGSLARVDFADGETKVTNT-EVFHTED 263 (426)
T ss_dssp CCSE----------------------------EEEE---EEE--TTEEEEEETTSSEEEEECCTTCCEEEEC-CCCSCTT
T ss_pred cCCc----------------------------eeec---cCC--CcEEEEEcCCCCEEEEECCCCcEEEEee-eeeccCC
Confidence 6532 0111 111 2344556678888888988888886432 0000000
Q ss_pred Cccc-ce--eeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcE----EeeecCCCC------CCCCcceEE
Q 040693 241 GAMW-GA--ATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNV----LWSTADPSN------GTAPGPVTV 307 (382)
Q Consensus 241 ~~~~-~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~----~W~~~~~~~------~~~~~~~~~ 307 (382)
.... .. .-+++.+++. ...+.|+.+|..+++. .|+...... +....++.+
T Consensus 264 ~p~~~~~~~~~dg~~~~~~-----------------s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~ 326 (426)
T 3c75_H 264 ELLINHPAFSLRSGRLVWP-----------------TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAY 326 (426)
T ss_dssp SCBCSCCEECTTTCEEEEE-----------------BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEE
T ss_pred CceeeEeeecCCCCEEEEE-----------------eCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEE
Confidence 0111 11 1145666665 2347899999877653 233211000 001112333
Q ss_pred --eCCEEEEeeec--------CCCcEEEEeCCCCcEeEEEecCCceecceEE-eCC-EEEEEeC-ceeEeecCCccCCCC
Q 040693 308 --ANGVLFGGSTY--------RQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNG-CIYMGNG-YKVTVGFGNKNFTSG 374 (382)
Q Consensus 308 --~~~~v~~~~~~--------~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g-~lyv~~~-~g~~~~~~~~~~~~g 374 (382)
+++++|+.... ..+.|.+||.++++++-+++++..-.+-.+. .+. ++|+++. .+. +.-+|..++
T Consensus 327 s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~---VsVID~~t~ 403 (426)
T 3c75_H 327 HRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQT---LHIYDAATG 403 (426)
T ss_dssp EGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTE---EEEEETTTC
T ss_pred cCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCe---EEEEECCCC
Confidence 35789998631 1247999999999999999886532222222 345 6888884 444 345788889
Q ss_pred CeEEEE
Q 040693 375 TSLYAF 380 (382)
Q Consensus 375 ~~l~~~ 380 (382)
+.+=..
T Consensus 404 kvv~tI 409 (426)
T 3c75_H 404 EELRSV 409 (426)
T ss_dssp CEEEEE
T ss_pred CEEEEe
Confidence 887543
No 43
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.98 E-value=7.3e-08 Score=87.16 Aligned_cols=165 Identities=18% Similarity=0.161 Sum_probs=116.3
Q ss_pred eeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCe
Q 040693 23 ITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNH 102 (382)
Q Consensus 23 ~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 102 (382)
+..-....++.||+++.. + .+..|..+|++||+++=+..+.+..+ | ..++..++.
T Consensus 44 ftqGL~~~~~~LyestG~--~---------g~S~v~~vD~~Tgkv~~~~~l~~~~F-------g-------eGit~~g~~ 98 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGL--N---------GRSSIRKVDIESGKTLQQIELGKRYF-------G-------EGISDWKDK 98 (262)
T ss_dssp EEEEEEEETTEEEEEEEE--T---------TEEEEEEECTTTCCEEEEEECCTTCC-------E-------EEEEEETTE
T ss_pred ccceEEEECCEEEEECCC--C---------CCceEEEEECCCCcEEEEEecCCccc-------e-------eEEEEeCCE
Confidence 334445668999998752 1 03589999999999999988743221 1 123444679
Q ss_pred EEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCC
Q 040693 103 VYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPG 182 (382)
Q Consensus 103 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (382)
||+.+.. .+.++.+|++|++++-+++.... .|..
T Consensus 99 ly~ltw~--------------------------------~~~v~v~D~~t~~~~~ti~~~~e-G~gl------------- 132 (262)
T 3nol_A 99 IVGLTWK--------------------------------NGLGFVWNIRNLRQVRSFNYDGE-GWGL------------- 132 (262)
T ss_dssp EEEEESS--------------------------------SSEEEEEETTTCCEEEEEECSSC-CCCE-------------
T ss_pred EEEEEee--------------------------------CCEEEEEECccCcEEEEEECCCC-ceEE-------------
Confidence 9998754 38999999999999999998643 2211
Q ss_pred CCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccc---eeeeCCeEEEEecC
Q 040693 183 PSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWG---AATDERRIYTNIAN 259 (382)
Q Consensus 183 ~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~---~~~~~~~v~~~~~~ 259 (382)
.. + +..+++.+.++.++.+|++|.+++-+.+.... +..... ....++.||++..
T Consensus 133 ------------t~----d---g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~---g~~~~~lNELe~~~G~lyan~w- 189 (262)
T 3nol_A 133 ------------TH----N---DQYLIMSDGTPVLRFLDPESLTPVRTITVTAH---GEELPELNELEWVDGEIFANVW- 189 (262)
T ss_dssp ------------EE----C---SSCEEECCSSSEEEEECTTTCSEEEEEECEET---TEECCCEEEEEEETTEEEEEET-
T ss_pred ------------ec----C---CCEEEEECCCCeEEEEcCCCCeEEEEEEeccC---CccccccceeEEECCEEEEEEc-
Confidence 11 1 45677777788999999999999988876421 111111 2235789998753
Q ss_pred ccccccccCCCCCCCCCceEEEEECCCCcEEeeecCC
Q 040693 260 SQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADP 296 (382)
Q Consensus 260 ~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~ 296 (382)
..+.|..||++||+++=++++.
T Consensus 190 ---------------~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 190 ---------------QTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp ---------------TSSEEEEECTTTCBEEEEEECT
T ss_pred ---------------cCCeEEEEECCCCcEEEEEECC
Confidence 3578999999999999888875
No 44
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.97 E-value=1.4e-07 Score=86.02 Aligned_cols=166 Identities=17% Similarity=0.154 Sum_probs=117.1
Q ss_pred ceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEc-cCcEEEEEe
Q 040693 143 NSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQ-KSGFAWALD 221 (382)
Q Consensus 143 g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~-~~g~l~ald 221 (382)
+.|..+|++||+++-+....... ....+..+ ++.||+.+ .++.++.+|
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~~~----------------------------fgeGi~~~---g~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDDSY----------------------------FGEGLTLL---NEKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCTTC----------------------------CEEEEEEE---TTEEEEEETTCSEEEEEE
T ss_pred CEEEEEECCCCCEEEEEecCCCc----------------------------ceEEEEEe---CCEEEEEEecCCEEEEEE
Confidence 79999999999999988865431 01111111 35666665 467999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCC-C
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNG-T 300 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~-~ 300 (382)
.+|++++-+++.+. ..-|+...+++.+|++ ..++.|+.+|++|.+++-++...... .
T Consensus 93 ~~t~~v~~~i~~g~-----~~g~glt~Dg~~l~vs-----------------~gs~~l~viD~~t~~v~~~I~Vg~~~~p 150 (266)
T 2iwa_A 93 RRTLSNIKNFTHQM-----KDGWGLATDGKILYGS-----------------DGTSILYEIDPHTFKLIKKHNVKYNGHR 150 (266)
T ss_dssp TTTTEEEEEEECCS-----SSCCEEEECSSSEEEE-----------------CSSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred CCCCcEEEEEECCC-----CCeEEEEECCCEEEEE-----------------CCCCeEEEEECCCCcEEEEEEECCCCcc
Confidence 99999999988651 1335555588899987 33588999999999999888865310 0
Q ss_pred --CCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCc-------------eecceEEe--CCEEEEEeCcee
Q 040693 301 --APGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGAT-------------IYGGASVS--NGCIYMGNGYKV 362 (382)
Q Consensus 301 --~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~-------------~~~~p~~~--~g~lyv~~~~g~ 362 (382)
...-+...++.+|+... ..+.|..||+++|+++-++++++. .....++. ++++||+.....
T Consensus 151 ~~~~nele~~dg~lyvn~~-~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 151 VIRLNELEYINGEVWANIW-QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp CCCEEEEEEETTEEEEEET-TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred cccceeEEEECCEEEEecC-CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 01122334789998874 578999999999999999987531 22344443 579999987655
No 45
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.97 E-value=5.1e-07 Score=88.04 Aligned_cols=276 Identities=12% Similarity=0.068 Sum_probs=155.8
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKL 81 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~ 81 (382)
+|.++++.+++..........+..+| ++.++.+.. ++.|..+|.++|+.+..+.....
T Consensus 147 wd~~~~~~~~~~~~h~~~V~~l~~~~---~~~l~s~s~--------------dg~i~vwd~~~~~~~~~~~~h~~----- 204 (464)
T 3v7d_B 147 YDSINKKFLLQLSGHDGGVWALKYAH---GGILVSGST--------------DRTVRVWDIKKGCCTHVFEGHNS----- 204 (464)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECS---TTEEEEEET--------------TSCEEEEETTTTEEEEEECCCSS-----
T ss_pred EECCCCcEEEEEeCCCcCEEEEEEcC---CCEEEEEeC--------------CCCEEEEECCCCcEEEEECCCCC-----
Confidence 36677777776654332222222211 355666654 89999999999998877653111
Q ss_pred CCCcCccccCCCceee--CCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEE
Q 040693 82 NEYAGAAIWGSSPSID--PIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYK 159 (382)
Q Consensus 82 ~~~~g~~~~~~~~~~~--~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~ 159 (382)
.+ ....+. +++..++.+.. ++.|..+|..+++.....
T Consensus 205 ------~v--~~l~~~~~~~~~~l~s~s~---------------------------------d~~i~vwd~~~~~~~~~~ 243 (464)
T 3v7d_B 205 ------TV--RCLDIVEYKNIKYIVTGSR---------------------------------DNTLHVWKLPKESSVPDH 243 (464)
T ss_dssp ------CE--EEEEEEESSSCEEEEEEET---------------------------------TSCEEEEECCCCCCC---
T ss_pred ------cc--EEEEEecCCCCCEEEEEcC---------------------------------CCcEEEeeCCCCcccccc
Confidence 01 012222 23344555443 378889998888776654
Q ss_pred ecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCC
Q 040693 160 QLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLG 239 (382)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~ 239 (382)
............. ...+.+. ....+ ....+..+. ..+..++++..++.+..+|..+++.+..+....
T Consensus 244 ~~~~~~~~~~~~~-~~~~~~~---~~~~~--~~~~v~~~~---~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~---- 310 (464)
T 3v7d_B 244 GEEHDYPLVFHTP-EENPYFV---GVLRG--HMASVRTVS---GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT---- 310 (464)
T ss_dssp ---CCSSEEESCG-GGCTTEE---EEECC--CSSCEEEEE---EETTEEEEEETTSCEEEEETTTTEEEEEECCCS----
T ss_pred cccCCcceEeecc-CCCeEEE---EEccC--ccceEEEEc---CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC----
Confidence 3322110000000 0000000 00000 011111121 125788899999999999999999988876321
Q ss_pred CCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeee
Q 040693 240 GGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGST 317 (382)
Q Consensus 240 g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~ 317 (382)
........ ++..++.+ ..++.|..+|.++|+.+.+...... ....+...+..++.++.
T Consensus 311 -~~v~~~~~~~~~~~l~sg-----------------~~dg~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~~~~l~s~s~ 370 (464)
T 3v7d_B 311 -DRIYSTIYDHERKRCISA-----------------SMDTTIRIWDLENGELMYTLQGHTA--LVGLLRLSDKFLVSAAA 370 (464)
T ss_dssp -SCEEEEEEETTTTEEEEE-----------------ETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECSSEEEEEET
T ss_pred -CCEEEEEEcCCCCEEEEE-----------------eCCCcEEEEECCCCcEEEEEeCCCC--cEEEEEEcCCEEEEEeC
Confidence 12222222 45566665 3458899999999999988875442 22344455677777774
Q ss_pred cCCCcEEEEeCCCCcEeEEEecCCceecceEEeCCEEEEEeCceeEeecCCccCCCCCeEE
Q 040693 318 YRQGPIYAMDVKTGKILWSYDTGATIYGGASVSNGCIYMGNGYKVTVGFGNKNFTSGTSLY 378 (382)
Q Consensus 318 ~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~~g~lyv~~~~g~~~~~~~~~~~~g~~l~ 378 (382)
+|.|..+|..+++..++..............+++++++.++|. +.+|. ..+|+.+.
T Consensus 371 --dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~dg~-i~iwd--~~~g~~~~ 426 (464)
T 3v7d_B 371 --DGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQ-FNIYN--LRSGKLVH 426 (464)
T ss_dssp --TSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEETTE-EEEEE--TTTCCEEE
T ss_pred --CCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEecCCe-EEEEE--CCCCcEEe
Confidence 9999999999999988886554333333345666666655654 45554 45577764
No 46
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.97 E-value=4.9e-07 Score=84.45 Aligned_cols=211 Identities=12% Similarity=0.101 Sum_probs=134.8
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.++|+.+.+....+.. + ....+.+++..++.+..+
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~-----------~--~~~~~spdg~~l~~g~~d------------------------ 143 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVD-----------A--WTLAFSPDSQYLATGTHV------------------------ 143 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTC-----------C--CCEEECTTSSEEEEECTT------------------------
T ss_pred CCcEEEEECCCCCEEEEEeCCCcc-----------E--EEEEECCCCCEEEEEcCC------------------------
Confidence 899999999999998887653211 1 135677777777776543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.+..+|..+++..+........+. -..+.++ +..|+++..
T Consensus 144 ---------g~v~i~~~~~~~~~~~~~~~~~~v~---------------------------~~~~spd---g~~lasg~~ 184 (321)
T 3ow8_A 144 ---------GKVNIFGVESGKKEYSLDTRGKFIL---------------------------SIAYSPD---GKYLASGAI 184 (321)
T ss_dssp ---------SEEEEEETTTCSEEEEEECSSSCEE---------------------------EEEECTT---SSEEEEEET
T ss_pred ---------CcEEEEEcCCCceeEEecCCCceEE---------------------------EEEECCC---CCEEEEEcC
Confidence 8999999999999988765433111 1112222 467888889
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
++.+..+|..+|+.+..++.... ....... ++..++.+ ..++.|..+|.++++.+-
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~-----~v~~l~~spd~~~l~s~-----------------s~dg~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHAM-----PIRSLTFSPDSQLLVTA-----------------SDDGYIKIYDVQHANLAG 242 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSS-----CCCEEEECTTSCEEEEE-----------------CTTSCEEEEETTTCCEEE
T ss_pred CCeEEEEECCCCcEEEEEcccCC-----ceeEEEEcCCCCEEEEE-----------------cCCCeEEEEECCCcceeE
Confidence 99999999999998877653211 1222222 44555554 345889999999999876
Q ss_pred eecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEE-EeCceeEeecC
Q 040693 292 STADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYM-GNGYKVTVGFG 367 (382)
Q Consensus 292 ~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv-~~~~g~~~~~~ 367 (382)
+....... ...+.+ ++..++.++ .++.|...|..+++.+-++............ .+++.++ ++.+|. +.+|
T Consensus 243 ~~~~h~~~--v~~~~~sp~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~-i~vw 317 (321)
T 3ow8_A 243 TLSGHASW--VLNVAFCPDDTHFVSSS--SDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE-IHIY 317 (321)
T ss_dssp EECCCSSC--EEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCC-EEEE
T ss_pred EEcCCCCc--eEEEEECCCCCEEEEEe--CCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCe-EEEE
Confidence 66543321 122223 245666666 4899999999999998887543332333333 3444444 444443 4444
No 47
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.96 E-value=1.9e-07 Score=83.76 Aligned_cols=164 Identities=16% Similarity=0.204 Sum_probs=118.5
Q ss_pred ceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEc-cCcEEEEEe
Q 040693 143 NSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQ-KSGFAWALD 221 (382)
Q Consensus 143 g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~-~~g~l~ald 221 (382)
+.|..+|++||+++=+.+++... ++..-.+. ++.||+.+ .++.++.+|
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~-----------------------fgeGi~~~--------~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPY-----------------------FGAGIVAW--------RDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTC-----------------------CEEEEEEE--------TTEEEEEESSSSEEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCc-----------------------ceeEEEEe--------CCEEEEEEeeCCEEEEEE
Confidence 68999999999999988876541 01111111 45666665 467999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCC-
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGT- 300 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~- 300 (382)
.+|++++-+++.+. .-|+...+++.+|++ +.+++|+.+|++|.+++-+++......
T Consensus 92 ~~tl~~~~ti~~~~------~Gwglt~dg~~L~vS-----------------dgs~~l~~iDp~t~~~~~~I~V~~~g~~ 148 (243)
T 3mbr_X 92 LATLTPRARFRYPG------EGWALTSDDSHLYMS-----------------DGTAVIRKLDPDTLQQVGSIKVTAGGRP 148 (243)
T ss_dssp TTTTEEEEEEECSS------CCCEEEECSSCEEEE-----------------CSSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred CCcCcEEEEEeCCC------CceEEeeCCCEEEEE-----------------CCCCeEEEEeCCCCeEEEEEEEccCCcc
Confidence 99999999998653 346666788999998 446889999999999998887643111
Q ss_pred --CCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC-------------ceecceEEe--CCEEEEEeCce
Q 040693 301 --APGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA-------------TIYGGASVS--NGCIYMGNGYK 361 (382)
Q Consensus 301 --~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~-------------~~~~~p~~~--~g~lyv~~~~g 361 (382)
...-+...++.+|+... ....|..||++||+++-+.++++ ......++. .++|||+.-..
T Consensus 149 ~~~lNeLe~~~G~lyanvw-~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 149 LDNLNELEWVNGELLANVW-LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp CCCEEEEEEETTEEEEEET-TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC
T ss_pred cccceeeEEeCCEEEEEEC-CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC
Confidence 11123345889998874 57899999999999999998663 133444553 58899886543
No 48
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.95 E-value=7.1e-08 Score=87.94 Aligned_cols=193 Identities=13% Similarity=0.081 Sum_probs=128.2
Q ss_pred CEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCC
Q 040693 32 GAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLY 111 (382)
Q Consensus 32 ~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~ 111 (382)
+.||+++.. + .++.|..+|++||+++-+..+....+ + ..++..++.+|+.+..
T Consensus 32 g~Lyvstg~--~---------~~s~v~~iD~~tg~v~~~i~l~~~~f-------g-------eGi~~~g~~lyv~t~~-- 84 (266)
T 2iwa_A 32 DTLFESTGL--Y---------GRSSVRQVALQTGKVENIHKMDDSYF-------G-------EGLTLLNEKLYQVVWL-- 84 (266)
T ss_dssp TEEEEEECS--T---------TTCEEEEEETTTCCEEEEEECCTTCC-------E-------EEEEEETTEEEEEETT--
T ss_pred CeEEEECCC--C---------CCCEEEEEECCCCCEEEEEecCCCcc-------e-------EEEEEeCCEEEEEEec--
Confidence 799997641 0 15689999999999999988742211 1 1233335789998754
Q ss_pred CCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecC-CCcccccccccCCCCCCCCCCCCCCCCC
Q 040693 112 SVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLG-GYDVWFGACNWYLNPNCPPGPSPDADFG 190 (382)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (382)
.+.+..+|++|++++-+++.. +. .|
T Consensus 85 ------------------------------~~~v~viD~~t~~v~~~i~~g~~~-g~----------------------- 110 (266)
T 2iwa_A 85 ------------------------------KNIGFIYDRRTLSNIKNFTHQMKD-GW----------------------- 110 (266)
T ss_dssp ------------------------------CSEEEEEETTTTEEEEEEECCSSS-CC-----------------------
T ss_pred ------------------------------CCEEEEEECCCCcEEEEEECCCCC-eE-----------------------
Confidence 389999999999999998876 22 11
Q ss_pred CCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCC
Q 040693 191 EAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPS 270 (382)
Q Consensus 191 ~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 270 (382)
- +..+ +..+++...++.|+.+|++|.+++-+...+.....-.........++.+|++..
T Consensus 111 ----g--lt~D---g~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~------------ 169 (266)
T 2iwa_A 111 ----G--LATD---GKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIW------------ 169 (266)
T ss_dssp ----E--EEEC---SSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET------------
T ss_pred ----E--EEEC---CCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecC------------
Confidence 0 1112 345667777889999999999999888865311110011122234678998743
Q ss_pred CCCCCCceEEEEECCCCcEEeeecCCCC---------C--CCCcceEEe--CCEEEEeeecCCCcEEEEeCCCC
Q 040693 271 KNSTIAGGWVAMDASNGNVLWSTADPSN---------G--TAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTG 331 (382)
Q Consensus 271 ~~~~~~g~v~a~d~~tG~~~W~~~~~~~---------~--~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG 331 (382)
..+.|..||++||+++=+++++.. . ....-+.++ ++++|++.. ..+.|+.++....
T Consensus 170 ----~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk-~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 170 ----QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK-LWPKLFEIKLHLV 238 (266)
T ss_dssp ----TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET-TCSEEEEEEEEEC
T ss_pred ----CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC-CCCeEEEEEEecc
Confidence 357899999999999888876410 0 011223343 468888773 5678999987654
No 49
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.95 E-value=1.6e-07 Score=91.63 Aligned_cols=167 Identities=11% Similarity=0.123 Sum_probs=110.7
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
++.|..+|..+++.+..+......+. -..+..+ +..+++++.|+.+..+|
T Consensus 289 d~~i~vwd~~~~~~~~~~~~~~~~v~---------------------------~~~~~~~---~~~l~sg~~dg~i~vwd 338 (464)
T 3v7d_B 289 DNTLIVWDVAQMKCLYILSGHTDRIY---------------------------STIYDHE---RKRCISASMDTTIRIWD 338 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEE---------------------------EEEEETT---TTEEEEEETTSCEEEEE
T ss_pred CCeEEEEECCCCcEEEEecCCCCCEE---------------------------EEEEcCC---CCEEEEEeCCCcEEEEE
Confidence 38899999999999888754322111 1111222 46788899999999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCC
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTA 301 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~ 301 (382)
..+|+.+..+.... .........+..++.+ ..++.|..+|+.+++..+....... ..
T Consensus 339 ~~~~~~~~~~~~h~-----~~v~~~~~~~~~l~s~-----------------s~dg~v~vwd~~~~~~~~~~~~~~~-~~ 395 (464)
T 3v7d_B 339 LENGELMYTLQGHT-----ALVGLLRLSDKFLVSA-----------------AADGSIRGWDANDYSRKFSYHHTNL-SA 395 (464)
T ss_dssp TTTTEEEEEECCCS-----SCEEEEEECSSEEEEE-----------------ETTSEEEEEETTTCCEEEEEECTTC-CC
T ss_pred CCCCcEEEEEeCCC-----CcEEEEEEcCCEEEEE-----------------eCCCcEEEEECCCCceeeeecCCCC-cc
Confidence 99999998886432 1223333355666665 3458899999999999888765431 11
Q ss_pred CcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC-ceecceEEeCCEEEEEeCceeEe
Q 040693 302 PGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA-TIYGGASVSNGCIYMGNGYKVTV 364 (382)
Q Consensus 302 ~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~-~~~~~p~~~~g~lyv~~~~g~~~ 364 (382)
......++.+++.++ ++.|..+|.++|+.+.+...+. .........++.++++.+++...
T Consensus 396 ~~~~~~~~~~l~~~~---dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~~ 456 (464)
T 3v7d_B 396 ITTFYVSDNILVSGS---ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQS 456 (464)
T ss_dssp EEEEEECSSEEEEEE---TTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTEE
T ss_pred EEEEEeCCCEEEEec---CCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCeE
Confidence 222223345555555 8999999999999998644333 33344555788888877655433
No 50
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.94 E-value=1.5e-07 Score=85.26 Aligned_cols=164 Identities=16% Similarity=0.187 Sum_probs=116.0
Q ss_pred eeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeE
Q 040693 24 TMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHV 103 (382)
Q Consensus 24 ~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v 103 (382)
.......++.||+++.. +|.|..+|++||+++-+. +.+..+ | -.++..++.|
T Consensus 57 tqGL~~~~~~Ly~stG~-------------~g~v~~iD~~Tgkv~~~~-l~~~~F-------g-------eGit~~g~~L 108 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGH-------------QGTLRQLSLESAQPVWME-RLGNIF-------A-------EGLASDGERL 108 (268)
T ss_dssp EEEEEEETTEEEEEETT-------------TTEEEECCSSCSSCSEEE-ECTTCC-------E-------EEEEECSSCE
T ss_pred cceEEEECCEEEEEcCC-------------CCEEEEEECCCCcEEeEE-CCCCcc-------e-------eEEEEeCCEE
Confidence 33455678999998863 678999999999999998 643221 1 1244456789
Q ss_pred EEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCC
Q 040693 104 YIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGP 183 (382)
Q Consensus 104 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (382)
|+.+.. .+.++.+|++|++++-+++.... .|.
T Consensus 109 y~ltw~--------------------------------~~~v~V~D~~Tl~~~~ti~~~~e-GwG--------------- 140 (268)
T 3nok_A 109 YQLTWT--------------------------------EGLLFTWSGMPPQRERTTRYSGE-GWG--------------- 140 (268)
T ss_dssp EEEESS--------------------------------SCEEEEEETTTTEEEEEEECSSC-CCC---------------
T ss_pred EEEEcc--------------------------------CCEEEEEECCcCcEEEEEeCCCc-eeE---------------
Confidence 998754 38999999999999999988643 221
Q ss_pred CCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCcccc
Q 040693 184 SPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHK 263 (382)
Q Consensus 184 ~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~ 263 (382)
+.. .+..+++...++.++.+|++|.+++-+.+.......-...-.....++.||++..
T Consensus 141 ----------Lt~-------Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw----- 198 (268)
T 3nok_A 141 ----------LCY-------WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIW----- 198 (268)
T ss_dssp ----------EEE-------ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET-----
T ss_pred ----------Eec-------CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEEC-----
Confidence 111 1467888888899999999999999888864311100000011234779998753
Q ss_pred ccccCCCCCCCCCceEEEEECCCCcEEeeecCC
Q 040693 264 NFNLKPSKNSTIAGGWVAMDASNGNVLWSTADP 296 (382)
Q Consensus 264 ~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~ 296 (382)
..+.|..||++||+++=++++.
T Consensus 199 -----------~s~~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 199 -----------HSSDVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp -----------TCSEEEEECTTTCBEEEEEECH
T ss_pred -----------CCCeEEEEeCCCCcEEEEEECC
Confidence 3578999999999998888764
No 51
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.92 E-value=6.8e-07 Score=86.76 Aligned_cols=212 Identities=12% Similarity=0.038 Sum_probs=140.3
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|..+++.++....... .+ ..+..++..++.+..+
T Consensus 152 dg~i~iwd~~~~~~~~~~~~h~~-----------~v----~~l~~~~~~l~sg~~d------------------------ 192 (435)
T 1p22_A 152 DNTIKIWDKNTLECKRILTGHTG-----------SV----LCLQYDERVIITGSSD------------------------ 192 (435)
T ss_dssp SSCEEEEESSSCCEEEEECCCSS-----------CE----EEEECCSSEEEEEETT------------------------
T ss_pred CCeEEEEeCCCCeEEEEEcCCCC-----------cE----EEEEECCCEEEEEcCC------------------------
Confidence 89999999999999988753111 11 1233345566666543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+|+.+.++...... +..+..+ ++.+++++.
T Consensus 193 ---------g~i~vwd~~~~~~~~~~~~h~~~-----------------------------v~~l~~~---~~~l~s~s~ 231 (435)
T 1p22_A 193 ---------STVRVWDVNTGEMLNTLIHHCEA-----------------------------VLHLRFN---NGMMVTCSK 231 (435)
T ss_dssp ---------SCEEEEESSSCCEEEEECCCCSC-----------------------------EEEEECC---TTEEEEEET
T ss_pred ---------CeEEEEECCCCcEEEEEcCCCCc-----------------------------EEEEEEc---CCEEEEeeC
Confidence 89999999999998877543221 1111111 458888999
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeee
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWST 293 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~ 293 (382)
++.+..+|..+++.......-. ...........++..++++ ..++.|..+|.++++.+.+.
T Consensus 232 dg~i~vwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~l~s~-----------------~~dg~i~vwd~~~~~~~~~~ 292 (435)
T 1p22_A 232 DRSIAVWDMASPTDITLRRVLV--GHRAAVNVVDFDDKYIVSA-----------------SGDRTIKVWNTSTCEFVRTL 292 (435)
T ss_dssp TSCEEEEECSSSSCCEEEEEEC--CCSSCEEEEEEETTEEEEE-----------------ETTSEEEEEETTTCCEEEEE
T ss_pred CCcEEEEeCCCCCCceeeeEec--CCCCcEEEEEeCCCEEEEE-----------------eCCCeEEEEECCcCcEEEEE
Confidence 9999999999887664222111 0111223333477777776 34588999999999999888
Q ss_pred cCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEeCCEEEEEeCceeEeecCCc
Q 040693 294 ADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVSNGCIYMGNGYKVTVGFGNK 369 (382)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~~g~lyv~~~~g~~~~~~~~ 369 (382)
..... ....+...++.++.++. ++.|..+|..+|+.+..+.............+..|+.++.+|. +.+|.+
T Consensus 293 ~~~~~--~v~~~~~~~~~l~~g~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~-i~vwd~ 363 (435)
T 1p22_A 293 NGHKR--GIACLQYRDRLVVSGSS--DNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGK-IKVWDL 363 (435)
T ss_dssp ECCSS--CEEEEEEETTEEEEEET--TSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSC-EEEEEH
T ss_pred cCCCC--cEEEEEeCCCEEEEEeC--CCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEeCCCc-EEEEEC
Confidence 75432 22334456778888774 9999999999999999887554444444555666666666655 455544
No 52
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.91 E-value=9.5e-07 Score=84.70 Aligned_cols=278 Identities=9% Similarity=-0.046 Sum_probs=151.9
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKL 81 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~ 81 (382)
||.+|++++=+.+.+..+ .+..+| .+..+|++......... -..++.|..||++|++++-+..+......
T Consensus 52 ~D~~t~~~~~~i~~g~~p--~i~~sp--Dg~~lyv~n~~~~~~~r----g~~~~~v~viD~~t~~~~~~i~~~~~~~~-- 121 (373)
T 2mad_H 52 LDAGSGSILGHVNGGFLP--NPVAAH--SGSEFALASTSFSRIAK----GKRTDYVEVFDPVTFLPIADIELPDAPRF-- 121 (373)
T ss_pred EECCCCeEEEEecCCCCC--CeEECC--CCCEEEEEecccccccc----CCCCCeEEEEECCCCcEEEEEECCCcccc--
Confidence 678888887555443211 222222 35678887631100000 00046799999999999988876411000
Q ss_pred CCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEE-Ee
Q 040693 82 NEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWY-KQ 160 (382)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~-~~ 160 (382)
..+... ..+.+++++.++|+.... ..+.|..|| ++|+++-+ .+
T Consensus 122 --~~g~~p--~~~~~spDG~~l~v~n~~-------------------------------~~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 122 --DVGPYS--WMNANTPNNADLLFFQFA-------------------------------AGPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred --ccCCCc--cceEECCCCCEEEEEecC-------------------------------CCCeEEEEE-CCCCEEeEEcC
Confidence 001001 246788899999997532 126899999 99999866 54
Q ss_pred cCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCC
Q 040693 161 LGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGG 240 (382)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g 240 (382)
.+.. ..+. ..+ ....+....+|.+..+|. +|+..+.....+.....
T Consensus 166 ~~~~----------------------------~~~~---~~~--~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~ 211 (373)
T 2mad_H 166 SPTC----------------------------YHIH---PGA--PSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAA 211 (373)
T ss_pred CCce----------------------------EEEE---eCC--CceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCC
Confidence 4321 1111 112 234455667889999999 99998765421110000
Q ss_pred Cc-ccce--eeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE----eeecCCC----C-CCCC-cceEE
Q 040693 241 GA-MWGA--ATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL----WSTADPS----N-GTAP-GPVTV 307 (382)
Q Consensus 241 ~~-~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~----W~~~~~~----~-~~~~-~~~~~ 307 (382)
.. ...+ ..+++.+++. ...+.++.+|..+++.. |...... . .... ..+.+
T Consensus 212 ~p~~~~~~~~~~~~~~~~~-----------------~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~ 274 (373)
T 2mad_H 212 QNLLTQPAQANKSGRIVWP-----------------VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAY 274 (373)
T ss_pred cceeecceeEecCCEEEEE-----------------cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEE
Confidence 01 0111 1134444443 23467999999876432 2221100 0 0001 11222
Q ss_pred --eCCEEEEeeec--------CCCcEEEEeCCCCcEeEEEecCCceecceEEeCC--EEEEEeC-ceeEeecCCccCCCC
Q 040693 308 --ANGVLFGGSTY--------RQGPIYAMDVKTGKILWSYDTGATIYGGASVSNG--CIYMGNG-YKVTVGFGNKNFTSG 374 (382)
Q Consensus 308 --~~~~v~~~~~~--------~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~~g--~lyv~~~-~g~~~~~~~~~~~~g 374 (382)
+++++|+.... ..+.|..||.++++++-+++++....+-....++ .+|+++. .+. +.-+|..++
T Consensus 275 s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~---V~ViD~~t~ 351 (373)
T 2mad_H 275 LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEV---LHIYDAGAG 351 (373)
T ss_pred CCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCe---EEEEECCCC
Confidence 35789987531 1357999999999999999887632222222344 5777663 433 355778888
Q ss_pred CeEEE
Q 040693 375 TSLYA 379 (382)
Q Consensus 375 ~~l~~ 379 (382)
+.+-.
T Consensus 352 ~vv~~ 356 (373)
T 2mad_H 352 DQDQS 356 (373)
T ss_pred CEEee
Confidence 87643
No 53
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.90 E-value=2e-07 Score=83.48 Aligned_cols=169 Identities=21% Similarity=0.223 Sum_probs=117.4
Q ss_pred eeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCC
Q 040693 22 FITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRN 101 (382)
Q Consensus 22 ~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 101 (382)
.+..-....++.||+++.. ++ +..|..+|++||+++=+..+....+ | ..++..++
T Consensus 21 ~ftqGL~~~~~~LyestG~--~g---------~S~v~~vD~~tgkv~~~~~l~~~~f-------g-------eGi~~~~~ 75 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGE--TG---------RSSVRKVDLETGRILQRAEVPPPYF-------G-------AGIVAWRD 75 (243)
T ss_dssp CCEEEEEEETTEEEEEECC--TT---------SCEEEEEETTTCCEEEEEECCTTCC-------E-------EEEEEETT
T ss_pred cccccEEEECCEEEEECCC--CC---------CceEEEEECCCCCEEEEEeCCCCcc-------e-------eEEEEeCC
Confidence 3444556778999998752 11 3589999999999998888743322 1 12333457
Q ss_pred eEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCC
Q 040693 102 HVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPP 181 (382)
Q Consensus 102 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 181 (382)
.+|+.+.. .+.++.+|++|++++-+++.... .|.
T Consensus 76 ~ly~ltw~--------------------------------~~~v~v~D~~tl~~~~ti~~~~~-Gwg------------- 109 (243)
T 3mbr_X 76 RLIQLTWR--------------------------------NHEGFVYDLATLTPRARFRYPGE-GWA------------- 109 (243)
T ss_dssp EEEEEESS--------------------------------SSEEEEEETTTTEEEEEEECSSC-CCE-------------
T ss_pred EEEEEEee--------------------------------CCEEEEEECCcCcEEEEEeCCCC-ceE-------------
Confidence 89998753 38999999999999999988643 221
Q ss_pred CCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCcc
Q 040693 182 GPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQ 261 (382)
Q Consensus 182 ~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~ 261 (382)
+. .+ +..++++..++.|+.+|++|.+++-+.+....+..-...-.....++.||+...
T Consensus 110 -------------lt---~d---g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw--- 167 (243)
T 3mbr_X 110 -------------LT---SD---DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVW--- 167 (243)
T ss_dssp -------------EE---EC---SSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET---
T ss_pred -------------Ee---eC---CCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEEC---
Confidence 11 11 456777788899999999999999888764211100000011235788998753
Q ss_pred ccccccCCCCCCCCCceEEEEECCCCcEEeeecCC
Q 040693 262 HKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADP 296 (382)
Q Consensus 262 ~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~ 296 (382)
....|..||++||+++=++++.
T Consensus 168 -------------~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 168 -------------LTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp -------------TTTEEEEECTTTCBEEEEEECG
T ss_pred -------------CCCeEEEEECCCCCEEEEEECC
Confidence 3578999999999998888765
No 54
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.90 E-value=2.8e-07 Score=85.74 Aligned_cols=61 Identities=8% Similarity=-0.013 Sum_probs=46.3
Q ss_pred CceEEEEECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC
Q 040693 276 AGGWVAMDASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA 341 (382)
Q Consensus 276 ~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~ 341 (382)
.+.|+.+|+++++.+.+...... ...+.+ +++++|++. .++.|..+|.++++++.+++.++
T Consensus 274 ~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~--~~~~v~v~d~~~~~~~~~~~~~~ 336 (349)
T 1jmx_B 274 LNRLAKYDLKQRKLIKAANLDHT---YYCVAFDKKGDKLYLGG--TFNDLAVFNPDTLEKVKNIKLPG 336 (349)
T ss_dssp ESEEEEEETTTTEEEEEEECSSC---CCEEEECSSSSCEEEES--BSSEEEEEETTTTEEEEEEECSS
T ss_pred cCeEEEEECccCeEEEEEcCCCC---ccceEECCCCCEEEEec--CCCeEEEEeccccceeeeeecCC
Confidence 46899999999999888876542 122333 345778765 37999999999999999998874
No 55
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.90 E-value=7.7e-07 Score=89.64 Aligned_cols=230 Identities=10% Similarity=0.043 Sum_probs=146.1
Q ss_pred cCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCC
Q 040693 31 KGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNL 110 (382)
Q Consensus 31 ~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~ 110 (382)
++.+|++.. .++.|..+|.++|+++.+...... + ....+++++.++|++..+
T Consensus 148 ~~~~~vs~~-------------~d~~V~v~D~~t~~~~~~i~~g~~------------~--~~v~~spdg~~l~v~~~d- 199 (543)
T 1nir_A 148 PNLFSVTLR-------------DAGQIALVDGDSKKIVKVIDTGYA------------V--HISRMSASGRYLLVIGRD- 199 (543)
T ss_dssp GGEEEEEEG-------------GGTEEEEEETTTCCEEEEEECSTT------------E--EEEEECTTSCEEEEEETT-
T ss_pred CCEEEEEEc-------------CCCeEEEEECCCceEEEEEecCcc------------c--ceEEECCCCCEEEEECCC-
Confidence 577887665 278999999999999988875311 1 135688888899998653
Q ss_pred CCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEEC--CCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCC
Q 040693 111 YSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDL--DTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDAD 188 (382)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~--~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (382)
+.|..+|. .|++.+-+.+...
T Consensus 200 --------------------------------~~V~v~D~~~~t~~~~~~i~~g~------------------------- 222 (543)
T 1nir_A 200 --------------------------------ARIDMIDLWAKEPTKVAEIKIGI------------------------- 222 (543)
T ss_dssp --------------------------------SEEEEEETTSSSCEEEEEEECCS-------------------------
T ss_pred --------------------------------CeEEEEECcCCCCcEEEEEecCC-------------------------
Confidence 88999999 8999887776421
Q ss_pred CCCCceEEEeee----CceeecEEEEEc-cCcEEEEEeCCCCCeeeeeccCCCCC------CCCcccceee--eCCeEEE
Q 040693 189 FGEAPMMLSMYR----NKVKHDIVVAVQ-KSGFAWALDRDSGSLIWSMEAGPGGL------GGGAMWGAAT--DERRIYT 255 (382)
Q Consensus 189 ~~~~p~~~~~~~----~g~~~~~v~~~~-~~g~l~ald~~tG~~~W~~~~~~~~~------~g~~~~~~~~--~~~~v~~ 255 (382)
.|.-..++. +| ..++++. .++.+..+|..|++++..++...... .......... +++.+|+
T Consensus 223 ---~p~~va~sp~~~~dg---~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~v 296 (543)
T 1nir_A 223 ---EARSVESSKFKGYED---RYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV 296 (543)
T ss_dssp ---EEEEEEECCSTTCTT---TEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEE
T ss_pred ---CcceEEeCCCcCCCC---CEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEE
Confidence 232233333 33 5566665 47899999999999998887531100 0101122222 4566666
Q ss_pred EecCccccccccCCCCCCCCCceEEEEECCCCcEEe--eecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCC
Q 040693 256 NIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW--STADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTG 331 (382)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W--~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG 331 (382)
+. ...+.|..+|..+++.+. ++.... ....+.+ ++.++|++.. .++.|.++|.++|
T Consensus 297 s~----------------~~~g~i~vvd~~~~~~l~~~~i~~~~---~~~~~~~spdg~~l~va~~-~~~~v~v~D~~tg 356 (543)
T 1nir_A 297 NV----------------KETGKVLLVNYKDIDNLTVTSIGAAP---FLHDGGWDSSHRYFMTAAN-NSNKVAVIDSKDR 356 (543)
T ss_dssp EE----------------TTTTEEEEEECTTSSSCEEEEEECCS---SCCCEEECTTSCEEEEEEG-GGTEEEEEETTTT
T ss_pred EE----------------CCCCeEEEEEecCCCcceeEEeccCc---CccCceECCCCCEEEEEec-CCCeEEEEECCCC
Confidence 53 235889999999987654 343221 1122233 3456777653 4688999999999
Q ss_pred cEeEEEecCCc-ee-cceE-Ee--CCEEEEEeCc-eeEeecCCccC
Q 040693 332 KILWSYDTGAT-IY-GGAS-VS--NGCIYMGNGY-KVTVGFGNKNF 371 (382)
Q Consensus 332 ~ilw~~~~~~~-~~-~~p~-~~--~g~lyv~~~~-g~~~~~~~~~~ 371 (382)
+++..++.+.. .. .... +. ++++|+++.. ...+.++..++
T Consensus 357 ~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 357 RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred eEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 99998886421 11 1112 22 4788887652 24456666655
No 56
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.90 E-value=1.9e-06 Score=79.31 Aligned_cols=205 Identities=16% Similarity=0.149 Sum_probs=126.7
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.++++.+-+...... .+ ....+.+++..++.+..+
T Consensus 86 d~~i~vwd~~~~~~~~~~~~~~~-----------~v--~~~~~~~~~~~l~s~~~d------------------------ 128 (312)
T 4ery_A 86 DKTLKIWDVSSGKCLKTLKGHSN-----------YV--FCCNFNPQSNLIVSGSFD------------------------ 128 (312)
T ss_dssp TSEEEEEETTTCCEEEEEECCSS-----------CE--EEEEECSSSSEEEEEETT------------------------
T ss_pred CCEEEEEECCCCcEEEEEcCCCC-----------CE--EEEEEcCCCCEEEEEeCC------------------------
Confidence 88999999999998876653111 01 124456666667666543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+++.+..+......+ .-.....+ +..++++..
T Consensus 129 ---------~~i~iwd~~~~~~~~~~~~~~~~v---------------------------~~~~~~~~---~~~l~~~~~ 169 (312)
T 4ery_A 129 ---------ESVRIWDVKTGKCLKTLPAHSDPV---------------------------SAVHFNRD---GSLIVSSSY 169 (312)
T ss_dssp ---------SCEEEEETTTCCEEEEECCCSSCE---------------------------EEEEECTT---SSEEEEEET
T ss_pred ---------CcEEEEECCCCEEEEEecCCCCcE---------------------------EEEEEcCC---CCEEEEEeC
Confidence 889999999999887765432211 01112222 457888889
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
++.+..+|..+++.+........ ........ ++..++.+ ..++.|..+|.++++.+.
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~-----------------~~d~~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDN----PPVSFVKFSPNGKYILAA-----------------TLDNTLKLWDYSKGKCLK 228 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSC----CCEEEEEECTTSSEEEEE-----------------ETTTEEEEEETTTTEEEE
T ss_pred CCcEEEEECCCCceeeEEeccCC----CceEEEEECCCCCEEEEE-----------------cCCCeEEEEECCCCcEEE
Confidence 99999999999988776543211 11111122 44555555 345889999999999988
Q ss_pred eecCCCCCCCCcce--EEeC-CEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEE
Q 040693 292 STADPSNGTAPGPV--TVAN-GVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMG 357 (382)
Q Consensus 292 ~~~~~~~~~~~~~~--~~~~-~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~ 357 (382)
.............. ...+ ..++.++ .++.|+.+|..+++++-++............ .++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 229 TYTGHKNEKYCIFANFSVTGGKWIVSGS--EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 296 (312)
T ss_dssp EECSSCCSSSCCCEEEECSSSCEEEECC--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred EEEecCCceEEEEEEEEeCCCcEEEEEC--CCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEE
Confidence 87654322111111 1123 4555555 5899999999999998887644333333333 34444444
No 57
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.86 E-value=6.3e-07 Score=83.05 Aligned_cols=229 Identities=17% Similarity=0.099 Sum_probs=135.2
Q ss_pred cCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCC
Q 040693 31 KGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNL 110 (382)
Q Consensus 31 ~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~ 110 (382)
.+++|+.... ++.|..+|.++|+++......... . ...+++++..+|+....
T Consensus 9 ~~~~~v~~~~-------------~~~v~~~d~~~~~~~~~~~~~~~~-----------~---~~~~s~dg~~l~~~~~~- 60 (331)
T 3u4y_A 9 SNFGIVVEQH-------------LRRISFFSTDTLEILNQITLGYDF-----------V---DTAITSDCSNVVVTSDF- 60 (331)
T ss_dssp CCEEEEEEGG-------------GTEEEEEETTTCCEEEEEECCCCE-----------E---EEEECSSSCEEEEEEST-
T ss_pred CCEEEEEecC-------------CCeEEEEeCcccceeeeEEccCCc-----------c---eEEEcCCCCEEEEEeCC-
Confidence 3667776652 789999999999998887652110 1 25677787788887653
Q ss_pred CCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcE-EEEEecCCCcccccccccCCCCCCCCCCCCCCCC
Q 040693 111 YSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKI-VWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADF 189 (382)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~-~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (382)
++.|+.+|+++|+. .........
T Consensus 61 -------------------------------~~~i~~~d~~~~~~~~~~~~~~~~------------------------- 84 (331)
T 3u4y_A 61 -------------------------------CQTLVQIETQLEPPKVVAIQEGQS------------------------- 84 (331)
T ss_dssp -------------------------------TCEEEEEECSSSSCEEEEEEECSS-------------------------
T ss_pred -------------------------------CCeEEEEECCCCceeEEecccCCC-------------------------
Confidence 27999999999998 555443322
Q ss_pred CCCceE-EEeeeCceeecEEEEEccC-c--EEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCcccc
Q 040693 190 GEAPMM-LSMYRNKVKHDIVVAVQKS-G--FAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHK 263 (382)
Q Consensus 190 ~~~p~~-~~~~~~g~~~~~v~~~~~~-g--~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~ 263 (382)
|.- ..+..+ +..+++...+ + .+..+|.++++.+...+... ......+ ++..+|+....
T Consensus 85 ---~~~~~~~s~d---g~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~------~~~~~~~spdg~~l~~~~~~---- 148 (331)
T 3u4y_A 85 ---SMADVDITPD---DQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY------DAVGIAISPNGNGLILIDRS---- 148 (331)
T ss_dssp ---CCCCEEECTT---SSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT------TEEEEEECTTSSCEEEEEET----
T ss_pred ---CccceEECCC---CCEEEEecCCCCcccEEEEECCCCCeEEEEECCC------CccceEECCCCCEEEEEecC----
Confidence 111 112222 3455554444 2 89999999999888776532 1122222 55567776332
Q ss_pred ccccCCCCCCCCCce-EEEEECCCCcEEeee---cCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcE---e
Q 040693 264 NFNLKPSKNSTIAGG-WVAMDASNGNVLWST---ADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKI---L 334 (382)
Q Consensus 264 ~~~~~~~~~~~~~g~-v~a~d~~tG~~~W~~---~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~i---l 334 (382)
.+. +..++......+... ..... .....+.+ ++..+|++.. .++.|..+|.+++++ +
T Consensus 149 ------------~~~~i~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~-~~~~v~v~d~~~~~~~~~~ 214 (331)
T 3u4y_A 149 ------------SANTVRRFKIDADGVLFDTGQEFISGG-TRPFNITFTPDGNFAFVANL-IGNSIGILETQNPENITLL 214 (331)
T ss_dssp ------------TTTEEEEEEECTTCCEEEEEEEEECSS-SSEEEEEECTTSSEEEEEET-TTTEEEEEECSSTTSCEEE
T ss_pred ------------CCceEEEEEECCCCcEeecCCccccCC-CCccceEECCCCCEEEEEeC-CCCeEEEEECCCCccccee
Confidence 244 666665543322211 11111 11122233 2346777763 478899999999998 7
Q ss_pred EEEecCCceecceEE-eCC-EEEEEeCceeEeecCCccCCCCCe
Q 040693 335 WSYDTGATIYGGASV-SNG-CIYMGNGYKVTVGFGNKNFTSGTS 376 (382)
Q Consensus 335 w~~~~~~~~~~~p~~-~~g-~lyv~~~~g~~~~~~~~~~~~g~~ 376 (382)
.+++.+.. ...+.+ .++ .||+++.....+ +.+|..+|+.
T Consensus 215 ~~~~~~~~-~~~~~~spdg~~l~v~~~~~~~i--~~~d~~~~~~ 255 (331)
T 3u4y_A 215 NAVGTNNL-PGTIVVSRDGSTVYVLTESTVDV--FNFNQLSGTL 255 (331)
T ss_dssp EEEECSSC-CCCEEECTTSSEEEEECSSEEEE--EEEETTTTEE
T ss_pred eeccCCCC-CceEEECCCCCEEEEEEcCCCEE--EEEECCCCce
Confidence 77775432 233334 344 488887644433 3466677776
No 58
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.86 E-value=4.8e-07 Score=83.60 Aligned_cols=192 Identities=10% Similarity=0.036 Sum_probs=118.4
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.++|+.+.++.-... .+ .+..+.+++..++.+..+
T Consensus 76 d~~i~vwd~~~~~~~~~~~~h~~-----------~v--~~~~~~~~~~~l~sgs~D------------------------ 118 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKVVDFEAHPD-----------YI--RSIAVHPTKPYVLSGSDD------------------------ 118 (304)
T ss_dssp TSEEEEEETTTCCEEEEEECCSS-----------CE--EEEEECSSSSEEEEEETT------------------------
T ss_pred CCEEEEEECCCCcEEEEEeCCCC-----------cE--EEEEEcCCCCEEEEECCC------------------------
Confidence 89999999999999887654211 11 134566666666665543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceE-EEeeeCceeecEEEEEc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMM-LSMYRNKVKHDIVVAVQ 212 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~g~~~~~v~~~~ 212 (382)
+.|..+|..+++.+-+.-.... .++. ..+.+.+ ...++++.
T Consensus 119 ---------~~v~lWd~~~~~~~~~~~~~h~---------------------------~~v~~v~~~p~~--~~~l~sgs 160 (304)
T 2ynn_A 119 ---------LTVKLWNWENNWALEQTFEGHE---------------------------HFVMCVAFNPKD--PSTFASGC 160 (304)
T ss_dssp ---------SCEEEEEGGGTTEEEEEECCCC---------------------------SCEEEEEECTTC--TTEEEEEE
T ss_pred ---------CeEEEEECCCCcchhhhhcccC---------------------------CcEEEEEECCCC--CCEEEEEe
Confidence 8899999888855433221111 1111 1111111 46788899
Q ss_pred cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEee
Q 040693 213 KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWS 292 (382)
Q Consensus 213 ~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~ 292 (382)
.|+.+..+|..+++.................+.+..++..++.+ ..++.|..+|.++++.+-+
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~-----------------s~D~~i~iWd~~~~~~~~~ 223 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITA-----------------SDDLTIKIWDYQTKSCVAT 223 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEE-----------------ETTSEEEEEETTTTEEEEE
T ss_pred CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEE-----------------cCCCeEEEEeCCCCcccee
Confidence 99999999998888776665332100000111111133445554 3458899999999998888
Q ss_pred ecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC
Q 040693 293 TADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA 341 (382)
Q Consensus 293 ~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~ 341 (382)
....... ...+.+ ++.+++.++ .++.|...|.++++.+.+++...
T Consensus 224 ~~~h~~~--v~~~~~~p~~~~l~s~s--~Dg~i~iWd~~~~~~~~~~~~~~ 270 (304)
T 2ynn_A 224 LEGHMSN--VSFAVFHPTLPIIISGS--EDGTLKIWNSSTYKVEKTLNVGL 270 (304)
T ss_dssp EECCSSC--EEEEEECSSSSEEEEEE--TTSCEEEEETTTCCEEEEECCSS
T ss_pred eCCCCCC--EEEEEECCCCCEEEEEc--CCCeEEEEECCCCceeeeccCCC
Confidence 7654321 122222 234566666 49999999999999998887654
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.86 E-value=7.9e-07 Score=81.97 Aligned_cols=206 Identities=9% Similarity=0.074 Sum_probs=125.9
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.++++......+.... ..+ ....+.+++..++++..+
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~~~~---------~~i--~~~~~~~~~~~l~~~~~d------------------------ 162 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELTSSA---------PAC--YALAISPDSKVCFSCCSD------------------------ 162 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECSS---------SCE--EEEEECTTSSEEEEEETT------------------------
T ss_pred CCcEEEEECCCCCcceeeecccCC---------Cce--EEEEECCCCCEEEEEeCC------------------------
Confidence 889999999998844443332110 001 134566666677776543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+++.+.+++...... .-.....+ +..++++..
T Consensus 163 ---------g~v~~~d~~~~~~~~~~~~~~~~i---------------------------~~~~~~~~---~~~l~~~~~ 203 (337)
T 1gxr_A 163 ---------GNIAVWDLHNQTLVRQFQGHTDGA---------------------------SCIDISND---GTKLWTGGL 203 (337)
T ss_dssp ---------SCEEEEETTTTEEEEEECCCSSCE---------------------------EEEEECTT---SSEEEEEET
T ss_pred ---------CcEEEEeCCCCceeeeeecccCce---------------------------EEEEECCC---CCEEEEEec
Confidence 889999999999888775432211 11112222 467888888
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
++.+..+|..+++.+....... ....... ++..++++ ..++.|..+|.++++...
T Consensus 204 dg~i~~~d~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~~~-----------------~~~~~i~~~~~~~~~~~~ 260 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQHDFTS------QIFSLGYCPTGEWLAVG-----------------MESSNVEVLHVNKPDKYQ 260 (337)
T ss_dssp TSEEEEEETTTTEEEEEEECSS------CEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTSSCEEE
T ss_pred CCcEEEEECCCCceEeeecCCC------ceEEEEECCCCCEEEEE-----------------cCCCcEEEEECCCCCeEE
Confidence 9999999999999988876432 1122222 45566665 345789999999988753
Q ss_pred eecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eC-CEEEEEeCcee
Q 040693 292 STADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SN-GCIYMGNGYKV 362 (382)
Q Consensus 292 ~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~-g~lyv~~~~g~ 362 (382)
...... ....+.+. +.+++.++ .++.|..+|..+++.+........+. +..+ .+ ..|++++.+|.
T Consensus 261 ~~~~~~---~v~~~~~~~~~~~l~~~~--~dg~i~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~ 329 (337)
T 1gxr_A 261 LHLHES---CVLSLKFAYCGKWFVSTG--KDNLLNAWRTPYGASIFQSKESSSVL-SCDISVDDKYIVTGSGDKK 329 (337)
T ss_dssp ECCCSS---CEEEEEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECSSCEE-EEEECTTSCEEEEEETTSC
T ss_pred EcCCcc---ceeEEEECCCCCEEEEec--CCCcEEEEECCCCeEEEEecCCCcEE-EEEECCCCCEEEEecCCCe
Confidence 322221 12222232 45666666 48999999999999997766544333 2333 33 44555566654
No 60
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.81 E-value=1.9e-06 Score=80.41 Aligned_cols=181 Identities=17% Similarity=0.209 Sum_probs=113.8
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
++.|..+|..+|+.+.++.......+. ....++ +..++++..++.+..+|
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~~~~---------------------------~~~spd---g~~l~~g~~dg~v~i~~ 150 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVDAWT---------------------------LAFSPD---SQYLATGTHVGKVNIFG 150 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCCCC---------------------------EEECTT---SSEEEEECTTSEEEEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCccEEE---------------------------EEECCC---CCEEEEEcCCCcEEEEE
Confidence 489999999999999887655432210 111112 46788889999999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCC
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNG 299 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~ 299 (382)
..+++..+...... ........ ++..+..+ ..++.|..+|+++|+.+.+.......
T Consensus 151 ~~~~~~~~~~~~~~-----~~v~~~~~spdg~~lasg-----------------~~dg~i~iwd~~~~~~~~~~~~h~~~ 208 (321)
T 3ow8_A 151 VESGKKEYSLDTRG-----KFILSIAYSPDGKYLASG-----------------AIDGIINIFDIATGKLLHTLEGHAMP 208 (321)
T ss_dssp TTTCSEEEEEECSS-----SCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred cCCCceeEEecCCC-----ceEEEEEECCCCCEEEEE-----------------cCCCeEEEEECCCCcEEEEEcccCCc
Confidence 99999988876432 12222222 45555555 34588999999999998877654321
Q ss_pred CCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEeCceeEeecCCccCCCCCe
Q 040693 300 TAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGNGYKVTVGFGNKNFTSGTS 376 (382)
Q Consensus 300 ~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~~g~~~~~~~~~~~~g~~ 376 (382)
...+.+ ++.+++.++ .++.|...|..+++.+-.+............ .+++.+++.+....+.+|.+ .+++.
T Consensus 209 --v~~l~~spd~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~--~~~~~ 282 (321)
T 3ow8_A 209 --IRSLTFSPDSQLLVTAS--DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV--GTRTC 282 (321)
T ss_dssp --CCEEEECTTSCEEEEEC--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET--TTTEE
T ss_pred --eeEEEEcCCCCEEEEEc--CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeC--CCCEE
Confidence 223333 234666665 4899999999999988776543333333333 24444444433344556654 44666
Q ss_pred EEEE
Q 040693 377 LYAF 380 (382)
Q Consensus 377 l~~~ 380 (382)
+..|
T Consensus 283 ~~~~ 286 (321)
T 3ow8_A 283 VHTF 286 (321)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 61
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.81 E-value=1.1e-06 Score=84.47 Aligned_cols=260 Identities=12% Similarity=0.037 Sum_probs=149.3
Q ss_pred ceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEE
Q 040693 26 SGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYI 105 (382)
Q Consensus 26 ~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v 105 (382)
.|.-...++||....... ..+.|+.||.+|++++.+.+.+... ...+++++..+|+
T Consensus 39 ~~~pd~~~vyV~~~~~~~---------~~~~V~ViD~~t~~v~~~I~vG~~P---------------~va~spDG~~lyV 94 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFA---------AVTQQFVIDGEAGRVIGMIDGGFLP---------------NPVVADDGSFIAH 94 (386)
T ss_dssp CCCCCTTEEEEEECGGGC---------SSEEEEEEETTTTEEEEEEEECSSC---------------EEEECTTSSCEEE
T ss_pred ccCCCCCEEEEEcCcccC---------CCCEEEEEECCCCeEEEEEECCCCC---------------cEEECCCCCEEEE
Confidence 455667899998752111 1468999999999999999874221 2578888899999
Q ss_pred EcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCC
Q 040693 106 ATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSP 185 (382)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (382)
+.... . |..-+...+.|..||.+|++++-+...+....
T Consensus 95 an~~~----~-------------------r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r------------------- 132 (386)
T 3sjl_D 95 ASTVF----S-------------------RIARGERTDYVEVFDPVTLLPTADIELPDAPR------------------- 132 (386)
T ss_dssp EEEEE----E-------------------ETTEEEEEEEEEEECTTTCCEEEEEEETTCCC-------------------
T ss_pred Ecccc----c-------------------ccccCCCCCEEEEEECCCCeEEEEEECCCccc-------------------
Confidence 75210 0 00000012679999999999999987754110
Q ss_pred CCCCCCCceEEEeeeCceeecEEEEEc--cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccce-eeeCCeEEEEecCccc
Q 040693 186 DADFGEAPMMLSMYRNKVKHDIVVAVQ--KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGA-ATDERRIYTNIANSQH 262 (382)
Q Consensus 186 ~~~~~~~p~~~~~~~~g~~~~~v~~~~--~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~-~~~~~~v~~~~~~~~~ 262 (382)
......|.-..+..+| ..+|+.. .++.+..+|.++++++-+++.+. . .+. ......++..
T Consensus 133 -~~~g~~P~~~a~spDG---k~lyVan~~~~~~VsVID~~t~~vv~tI~v~g-----~--~~~~P~g~~~~~~~------ 195 (386)
T 3sjl_D 133 -FLVGTYPWMTSLTPDG---KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD-----C--YHIFPTAPDTFFMH------ 195 (386)
T ss_dssp -CCBSCCGGGEEECTTS---SEEEEEECSSSCEEEEEETTTTEEEEEEECCS-----E--EEEEEEETTEEEEE------
T ss_pred -cccCCCCceEEEcCCC---CEEEEEEcCCCCeEEEEECCCCcEEEEEECCC-----c--ceeecCCCceeEEE------
Confidence 0011234334444444 4566654 36789999999999999887532 1 111 1122333332
Q ss_pred cccccCCCCCCCCCceEEEEECCC-CcEEeeecCCC---CCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCc--Ee
Q 040693 263 KNFNLKPSKNSTIAGGWVAMDASN-GNVLWSTADPS---NGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGK--IL 334 (382)
Q Consensus 263 ~~~~~~~~~~~~~~g~v~a~d~~t-G~~~W~~~~~~---~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~--il 334 (382)
..+|++..++..+ |++.=+..... .......+.+ .++.+++.+. .|.++++|..+++ ++
T Consensus 196 -----------~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~--~g~V~v~d~~~~~~~v~ 262 (386)
T 3sjl_D 196 -----------CRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY--TGKIHQIDLSSGDAKFL 262 (386)
T ss_dssp -----------ETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT--TSEEEEEECTTSSCEEC
T ss_pred -----------CCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC--CCEEEEEECCCCcceee
Confidence 2346777777775 66532111110 0111111222 3565444553 8999999998664 33
Q ss_pred EEEecC------Cc----eecceEE--eCCEEEEEeCce-------eEeecCCccCCCCCeEEEEE
Q 040693 335 WSYDTG------AT----IYGGASV--SNGCIYMGNGYK-------VTVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 335 w~~~~~------~~----~~~~p~~--~~g~lyv~~~~g-------~~~~~~~~~~~~g~~l~~~~ 381 (382)
-+..+- .+ ......+ ..++||+....+ ..-.++.+|.+|++.+-.+.
T Consensus 263 ~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~ 328 (386)
T 3sjl_D 263 PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE 328 (386)
T ss_dssp CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE
T ss_pred cceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE
Confidence 333210 00 1111222 579999986421 12345779999999876654
No 62
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.81 E-value=1.4e-06 Score=82.89 Aligned_cols=240 Identities=10% Similarity=0.049 Sum_probs=138.8
Q ss_pred cceEEEEeC----ccCceeeeeeccCCCCCCCCCC---cCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCC
Q 040693 54 QGSLAKLDA----KTGRILWQTFMLPDNFGKLNEY---AGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQ 126 (382)
Q Consensus 54 ~g~l~ald~----~tG~~lW~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~ 126 (382)
++.|..+|. .+|+.+|+.............. .+.........+.+++..++++..+
T Consensus 67 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----------------- 129 (425)
T 1r5m_A 67 NSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVEN----------------- 129 (425)
T ss_dssp BTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETT-----------------
T ss_pred CceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCC-----------------
Confidence 899999999 9999877764321111000000 0011011235566666677776543
Q ss_pred CCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeec
Q 040693 127 TTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHD 206 (382)
Q Consensus 127 ~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 206 (382)
+.|..+| .+|+.+..+......+. -..+..+ +.
T Consensus 130 ----------------g~i~i~~-~~~~~~~~~~~~~~~v~---------------------------~~~~~~~---~~ 162 (425)
T 1r5m_A 130 ----------------GELRLWN-KTGALLNVLNFHRAPIV---------------------------SVKWNKD---GT 162 (425)
T ss_dssp ----------------SCEEEEE-TTSCEEEEECCCCSCEE---------------------------EEEECTT---SS
T ss_pred ----------------CeEEEEe-CCCCeeeeccCCCccEE---------------------------EEEECCC---CC
Confidence 7899999 67998888764332111 1111222 45
Q ss_pred EEEEEccCcEEEEEeCCCCCeeeeeccCCCCCC----------CCccccee-eeCCeEEEEecCccccccccCCCCCCCC
Q 040693 207 IVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLG----------GGAMWGAA-TDERRIYTNIANSQHKNFNLKPSKNSTI 275 (382)
Q Consensus 207 ~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~----------g~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 275 (382)
.|+++..++.+..+|..+++.+..+........ +....... ..++.++++ ..
T Consensus 163 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~ 225 (425)
T 1r5m_A 163 HIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIP-----------------GP 225 (425)
T ss_dssp EEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEE-----------------CG
T ss_pred EEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEE-----------------cC
Confidence 788888899999999999999988875432100 00011111 245666665 44
Q ss_pred CceEEEEECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEe-CC
Q 040693 276 AGGWVAMDASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVS-NG 352 (382)
Q Consensus 276 ~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~-~g 352 (382)
++.|..+|.++++.+......... ...+.+ ++.+++.++ .++.|..+|..+++.+..+............. ++
T Consensus 226 ~g~i~~~d~~~~~~~~~~~~~~~~--i~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 301 (425)
T 1r5m_A 226 KGAIFVYQITEKTPTGKLIGHHGP--ISVLEFNDTNKLLLSAS--DDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD 301 (425)
T ss_dssp GGCEEEEETTCSSCSEEECCCSSC--EEEEEEETTTTEEEEEE--TTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT
T ss_pred CCeEEEEEcCCCceeeeeccCCCc--eEEEEECCCCCEEEEEc--CCCEEEEEECCCCccceEecCCCccEEEEEECCCC
Confidence 588999999999988877644321 122223 245676666 48999999999999988886444333344443 45
Q ss_pred EEEEEeCceeEeecCCccCCCCCeEEEEE
Q 040693 353 CIYMGNGYKVTVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 353 ~lyv~~~~g~~~~~~~~~~~~g~~l~~~~ 381 (382)
.+++++.+|. +.+| |..+++.+..+.
T Consensus 302 ~l~~~~~d~~-i~i~--d~~~~~~~~~~~ 327 (425)
T 1r5m_A 302 KVISCSMDGS-VRLW--SLKQNTLLALSI 327 (425)
T ss_dssp EEEEEETTSE-EEEE--ETTTTEEEEEEE
T ss_pred EEEEEeCCCc-EEEE--ECCCCcEeEecc
Confidence 6666666655 3444 445677776553
No 63
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.81 E-value=1.2e-06 Score=81.64 Aligned_cols=228 Identities=11% Similarity=0.011 Sum_probs=132.5
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|..+++.+.+....... ....+.+++..++++..+.
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~~v--------------~~~~~~~~~~~l~~~~~~~----------------------- 137 (369)
T 3zwl_B 95 DYSIKLWDVSNGQCVATWKSPVPV--------------KRVEFSPCGNYFLAILDNV----------------------- 137 (369)
T ss_dssp TTEEEEEETTTCCEEEEEECSSCE--------------EEEEECTTSSEEEEEECCB-----------------------
T ss_pred CCeEEEEECCCCcEEEEeecCCCe--------------EEEEEccCCCEEEEecCCc-----------------------
Confidence 899999999999999988742111 1355666666666655420
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCC--CceEEEeeeCceeecEEEEE
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGE--APMMLSMYRNKVKHDIVVAV 211 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~g~~~~~v~~~ 211 (382)
....+.|..+|..+++............... ...... ......+..+ +..++++
T Consensus 138 -----~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~---~~~l~~~ 193 (369)
T 3zwl_B 138 -----MKNPGSINIYEIERDSATHELTKVSEEPIHK----------------IITHEGLDAATVAGWSTK---GKYIIAG 193 (369)
T ss_dssp -----TTBCCEEEEEEEEECTTTCCEEEECSSCSEE----------------EECCTTCCCEEEEEECGG---GCEEEEE
T ss_pred -----cCCCCEEEEEEecCCccceeecccccceeee----------------ccCCcCccceeEEEEcCC---CCEEEEE
Confidence 1123678888877766544433221100000 000001 1111222222 4578888
Q ss_pred ccCcEEEEEeCCC-CCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCc
Q 040693 212 QKSGFAWALDRDS-GSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGN 288 (382)
Q Consensus 212 ~~~g~l~ald~~t-G~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~ 288 (382)
..++.+..+|..+ ++.+..+.... ........ ++..++++ ..++.|..+|.++++
T Consensus 194 ~~dg~i~i~d~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~-----------------~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 194 HKDGKISKYDVSNNYEYVDSIDLHE-----KSISDMQFSPDLTYFITS-----------------SRDTNSFLVDVSTLQ 251 (369)
T ss_dssp ETTSEEEEEETTTTTEEEEEEECCS-----SCEEEEEECTTSSEEEEE-----------------ETTSEEEEEETTTCC
T ss_pred cCCCEEEEEECCCCcEeEEEEecCC-----CceeEEEECCCCCEEEEe-----------------cCCceEEEEECCCCc
Confidence 8899999999998 67776666422 12222222 45556555 345889999999999
Q ss_pred EEeeecCCCCCCCCcceEE--eCCEEEEeeecCCC--------------cEEEEeCCCCcEeEEEecCCceecceEE-eC
Q 040693 289 VLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQG--------------PIYAMDVKTGKILWSYDTGATIYGGASV-SN 351 (382)
Q Consensus 289 ~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g--------------~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~ 351 (382)
.+........ ...+.+ .+..++++.. ++ .+..+|..+++.+..+...........+ .+
T Consensus 252 ~~~~~~~~~~---~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~ 326 (369)
T 3zwl_B 252 VLKKYETDCP---LNTAVITPLKEFIILGGG--QEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQ 326 (369)
T ss_dssp EEEEEECSSC---EEEEEECSSSSEEEEEEC--CC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred eeeeecCCCC---ceeEEecCCCceEEEeec--CCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCC
Confidence 9988874431 122222 2456666553 44 7899999999999888755444444444 24
Q ss_pred CEEEE-EeCceeEeecCCcc
Q 040693 352 GCIYM-GNGYKVTVGFGNKN 370 (382)
Q Consensus 352 g~lyv-~~~~g~~~~~~~~~ 370 (382)
+++++ ++.+|. +.+|.++
T Consensus 327 ~~~l~s~~~dg~-v~iw~~~ 345 (369)
T 3zwl_B 327 GTSYASGGEDGF-IRLHHFE 345 (369)
T ss_dssp SSEEEEEETTSE-EEEEEEC
T ss_pred CCEEEEEcCCCe-EEEEECc
Confidence 55444 445544 5555544
No 64
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.80 E-value=3.3e-06 Score=85.48 Aligned_cols=257 Identities=11% Similarity=0.076 Sum_probs=151.4
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCc--cCceeeeeeccCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAK--TGRILWQTFMLPDNFG 79 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~--tG~~lW~~~~~~~~~~ 79 (382)
||.+|++++.+...+..+ ..+..+| .+..+|++.. ++.|..+|.. |++++.+...+...
T Consensus 182 iD~~t~~v~~~i~~g~~p-~~v~~Sp--DGr~lyv~~~--------------dg~V~viD~~~~t~~~v~~i~~G~~P-- 242 (567)
T 1qks_A 182 IDGSTYEIKTVLDTGYAV-HISRLSA--SGRYLFVIGR--------------DGKVNMIDLWMKEPTTVAEIKIGSEA-- 242 (567)
T ss_dssp EETTTCCEEEEEECSSCE-EEEEECT--TSCEEEEEET--------------TSEEEEEETTSSSCCEEEEEECCSEE--
T ss_pred EECCCCeEEEEEeCCCCc-cceEECC--CCCEEEEEcC--------------CCeEEEEECCCCCCcEeEEEecCCCC--
Confidence 688999999988765321 1222223 3456888764 7899999996 99999887763221
Q ss_pred CCCCCcCccccCCCceee----CCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcE
Q 040693 80 KLNEYAGAAIWGSSPSID----PIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKI 155 (382)
Q Consensus 80 ~~~~~~g~~~~~~~~~~~----~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~ 155 (382)
....++ +++.++|++... .+.+..||..|.++
T Consensus 243 ------------~~ia~s~~~~pDGk~l~v~n~~--------------------------------~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 243 ------------RSIETSKMEGWEDKYAIAGAYW--------------------------------PPQYVIMDGETLEP 278 (567)
T ss_dssp ------------EEEEECCSTTCTTTEEEEEEEE--------------------------------TTEEEEEETTTCCE
T ss_pred ------------ceeEEccccCCCCCEEEEEEcc--------------------------------CCeEEEEECCCCcE
Confidence 124566 477899997653 38899999999999
Q ss_pred EEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCC
Q 040693 156 VWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGP 235 (382)
Q Consensus 156 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~ 235 (382)
+.......... .. ..+...|.+..+...-.....++.....|.+..+|..+.+.+-......
T Consensus 279 ~~~i~~~~~~~---~~---------------~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~ 340 (567)
T 1qks_A 279 KKIQSTRGMTY---DE---------------QEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISA 340 (567)
T ss_dssp EEEEECCEECT---TT---------------CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEEC
T ss_pred EEEEecccccc---cc---------------ccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeec
Confidence 99988654210 00 0000123333221111112334445566888888887765332222111
Q ss_pred CCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecC-CCCCC-CCcceEEe--C
Q 040693 236 GGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTAD-PSNGT-APGPVTVA--N 309 (382)
Q Consensus 236 ~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~-~~~~~-~~~~~~~~--~ 309 (382)
+.......+ ++..+|+... .++.|..+|.++++++...+. ...+. ..+...+. +
T Consensus 341 ----~~~~~d~~~~pdgr~~~va~~----------------~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~ 400 (567)
T 1qks_A 341 ----ERFLHDGGLDGSHRYFITAAN----------------ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTF 400 (567)
T ss_dssp ----CSSEEEEEECTTSCEEEEEEG----------------GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTT
T ss_pred ----cccccCceECCCCCEEEEEeC----------------CCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCC
Confidence 111111122 5666777632 347799999999999999987 44221 12222233 3
Q ss_pred CEEEEeeecCCCcEEEEeCCC-------CcEeEEEecCCce--ecceEEeCCEEEEEeC
Q 040693 310 GVLFGGSTYRQGPIYAMDVKT-------GKILWSYDTGATI--YGGASVSNGCIYMGNG 359 (382)
Q Consensus 310 ~~v~~~~~~~~g~l~~ld~~t-------G~ilw~~~~~~~~--~~~p~~~~g~lyv~~~ 359 (382)
+.+|+.+...++.|.+||.++ -+++-+.+..+.. +-...-....|||.+.
T Consensus 401 g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~ 459 (567)
T 1qks_A 401 GPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDAT 459 (567)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECT
T ss_pred CcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecC
Confidence 678876532357899999987 5677776664321 1111113457888763
No 65
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.79 E-value=1.2e-06 Score=85.45 Aligned_cols=258 Identities=12% Similarity=0.015 Sum_probs=150.1
Q ss_pred EEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcC
Q 040693 29 YYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATG 108 (382)
Q Consensus 29 v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~ 108 (382)
....++||........ .+.|..||++|++++++.+++... ...+++++..+|++..
T Consensus 82 ~~~~~vyV~n~~~~~~---------~~~VsVID~~t~~vv~~I~vG~~P---------------gia~SpDgk~lyVan~ 137 (426)
T 3c75_H 82 PDARRVYIQDPAHFAA---------ITQQFVIDGSTGRILGMTDGGFLP---------------HPVAAEDGSFFAQAST 137 (426)
T ss_dssp CCTTEEEEEECTTTCS---------SEEEEEEETTTTEEEEEEEECSSC---------------EEEECTTSSCEEEEEE
T ss_pred CCCCEEEEECCCcCCC---------CCeEEEEECCCCEEEEEEECCCCC---------------ceEECCCCCEEEEEec
Confidence 4567899987531000 178999999999999999985321 2678889999999852
Q ss_pred CCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCC
Q 040693 109 NLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDAD 188 (382)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (382)
... +...+...+.|..||..|++++-+...+....+ .
T Consensus 138 ~~~-----------------------~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~--------------------~ 174 (426)
T 3c75_H 138 VFE-----------------------RIARGKRTDYVEVFDPVTFLPIADIELPDAPRF--------------------L 174 (426)
T ss_dssp EEE-----------------------ETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC--------------------C
T ss_pred ccc-----------------------ccccCCCCCEEEEEECCCCcEEEEEECCCcccc--------------------c
Confidence 100 000000136899999999999999887511000 0
Q ss_pred CCCCceEEEeeeCceeecEEEEEcc--CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccc
Q 040693 189 FGEAPMMLSMYRNKVKHDIVVAVQK--SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFN 266 (382)
Q Consensus 189 ~~~~p~~~~~~~~g~~~~~v~~~~~--~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~ 266 (382)
....|.-+.++.+ +..+|+... ++.+..+|.++++++.+++.+. . .....++...|+..
T Consensus 175 ~g~~P~~~~~spD---Gk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g------~-~~~~p~g~~~~v~~--------- 235 (426)
T 3c75_H 175 VGTYQWMNALTPD---NKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD------C-YHIFPASPTVFYMN--------- 235 (426)
T ss_dssp BSCCGGGSEECTT---SSEEEEEECSSSCEEEEEETTTTEEEEEEECCS------E-EEEEEEETTEEEEE---------
T ss_pred cCCCcceEEEcCC---CCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC------c-eeeccCCCcEEEEE---------
Confidence 0011222222223 356666542 5789999999999999988642 1 11111334555543
Q ss_pred cCCCCCCCCCceEEEEECCCCcEEeeec----CCCCCCCC-cceEEeCCEEEEeeecCCCcEEEEeCCCCcE----eEEE
Q 040693 267 LKPSKNSTIAGGWVAMDASNGNVLWSTA----DPSNGTAP-GPVTVANGVLFGGSTYRQGPIYAMDVKTGKI----LWSY 337 (382)
Q Consensus 267 ~~~~~~~~~~g~v~a~d~~tG~~~W~~~----~~~~~~~~-~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~i----lw~~ 337 (382)
..+|++..++..++++.++.. ........ .+..-+++.+|+.+. .+.++.+|..++++ .|+.
T Consensus 236 -------~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~--~g~V~ViD~~~~~~~v~~~~~~ 306 (426)
T 3c75_H 236 -------CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY--TGKIFQADLTAEGATFRAPIEA 306 (426)
T ss_dssp -------ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT--TSEEEEEEECSSCEEECCCEES
T ss_pred -------cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC--CCcEEEEeccCCceEEeeeeee
Confidence 335788889998898887542 11111001 111123466666664 78999999876553 2332
Q ss_pred ecCC----cee---c-ceEE--eCCEEEEEeCce-------eEeecCCccCCCCCeEEEEE
Q 040693 338 DTGA----TIY---G-GASV--SNGCIYMGNGYK-------VTVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 338 ~~~~----~~~---~-~p~~--~~g~lyv~~~~g-------~~~~~~~~~~~~g~~l~~~~ 381 (382)
.... +.. . ...+ .+++|||.+.++ ..-.+..+|..+.+.+-.+.
T Consensus 307 ~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~ 367 (426)
T 3c75_H 307 LTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE 367 (426)
T ss_dssp SCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE
T ss_pred ccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE
Confidence 1100 000 0 1122 468999987531 11235668888888876553
No 66
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.79 E-value=3.5e-07 Score=86.57 Aligned_cols=223 Identities=10% Similarity=0.040 Sum_probs=130.0
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
+|.|..+|.++|+.+.......... ...+ .+..+.+++.+++.+..+
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H-------~~~V--~~v~~spdg~~l~sgs~d------------------------ 148 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEH-------DDIV--STVSVLSSGTQAVSGSKD------------------------ 148 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECC-------SSCE--EEEEECTTSSEEEEEETT------------------------
T ss_pred CCEEEEEeccCCCceeEeeccccCC-------CCCE--EEEEECCCCCEEEEEeCC------------------------
Confidence 8999999999999877655321110 0111 234566676677666543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+|+.+-.+......+. -.....++ ..+++.+..
T Consensus 149 ---------~~i~iwd~~~~~~~~~~~~h~~~V~---------------------------~~~~~~~~--~~~l~s~s~ 190 (344)
T 4gqb_B 149 ---------ICIKVWDLAQQVVLSSYRAHAAQVT---------------------------CVAASPHK--DSVFLSCSE 190 (344)
T ss_dssp ---------SCEEEEETTTTEEEEEECCCSSCEE---------------------------EEEECSSC--TTEEEEEET
T ss_pred ---------CeEEEEECCCCcEEEEEcCcCCceE---------------------------EEEecCCC--CCceeeecc
Confidence 8899999999999877654322111 11112222 456778888
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
|+.+..+|..+++..-++..... +........ +++.+++.. ..++.|..+|.++++.+.
T Consensus 191 D~~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~p~~~~~l~sg----------------~~dg~v~~wd~~~~~~~~ 251 (344)
T 4gqb_B 191 DNRILLWDTRCPKPASQIGCSAP---GYLPTSLAWHPQQSEVFVFG----------------DENGTVSLVDTKSTSCVL 251 (344)
T ss_dssp TSCEEEEETTSSSCEEECC-------CCCEEEEEECSSCTTEEEEE----------------ETTSEEEEEESCC--CCE
T ss_pred ccccccccccccceeeeeeccee---eccceeeeecCCCCcceEEe----------------ccCCcEEEEECCCCcEEE
Confidence 99999999999998877653321 111112222 344444432 345889999999999988
Q ss_pred eecCCCCCCCCcceEEe--CC-EEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeCceeEeec
Q 040693 292 STADPSNGTAPGPVTVA--NG-VLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNGYKVTVGF 366 (382)
Q Consensus 292 ~~~~~~~~~~~~~~~~~--~~-~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~g~~~~~ 366 (382)
+....... ...+.+. +. ++..++ .++.|..+|..+++++ +..-......+... .+..|+++.+....+.+
T Consensus 252 ~~~~h~~~--v~~v~fsp~g~~~lasgs--~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~ 326 (344)
T 4gqb_B 252 SSAVHSQC--VTGLVFSPHSVPFLASLS--EDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVH 326 (344)
T ss_dssp EEECCSSC--EEEEEECSSSSCCEEEEE--TTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred EEcCCCCC--EEEEEEccCCCeEEEEEe--CCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEE
Confidence 87754421 2233332 32 455555 4899999999998865 33222222333333 34557765554344556
Q ss_pred CCccC
Q 040693 367 GNKNF 371 (382)
Q Consensus 367 ~~~~~ 371 (382)
+.+..
T Consensus 327 w~v~~ 331 (344)
T 4gqb_B 327 HVVPT 331 (344)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 66544
No 67
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.79 E-value=1.2e-05 Score=73.05 Aligned_cols=255 Identities=15% Similarity=0.138 Sum_probs=145.7
Q ss_pred CCcCCCC-ceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCC
Q 040693 1 AVKRSNG-KLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFG 79 (382)
Q Consensus 1 ald~~tG-k~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~ 79 (382)
++|..++ ++..+..........+. ...++.++.+.. +|.|..+|.++++..-........
T Consensus 1 ~~d~~~~~~~~~~l~~h~~~v~~~~---~~~~~~l~s~~~--------------dg~v~vw~~~~~~~~~~~~~~~~~-- 61 (313)
T 3odt_A 1 GIDPFTGYQLSATLKGHDQDVRDVV---AVDDSKVASVSR--------------DGTVRLWSKDDQWLGTVVYTGQGF-- 61 (313)
T ss_dssp ----CCCCEEEEEECCCSSCEEEEE---EEETTEEEEEET--------------TSEEEEEEESSSEEEEEEEECSSC--
T ss_pred CCCccccHHHHHHhhCCCCCcEEEE---ecCCCEEEEEEc--------------CCcEEEEECCCCEEEEEeecCCcc--
Confidence 3677776 33333333322221221 134566776664 899999999999888776642111
Q ss_pred CCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCC---cEE
Q 040693 80 KLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTG---KIV 156 (382)
Q Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG---~~~ 156 (382)
+ ....+.+++..++.+..+ +.+..+|..+. +.+
T Consensus 62 ---------v--~~~~~~~~~~~l~~~~~d---------------------------------g~i~~~~~~~~~~~~~~ 97 (313)
T 3odt_A 62 ---------L--NSVCYDSEKELLLFGGKD---------------------------------TMINGVPLFATSGEDPL 97 (313)
T ss_dssp ---------E--EEEEEETTTTEEEEEETT---------------------------------SCEEEEETTCCTTSCC-
T ss_pred ---------E--EEEEECCCCCEEEEecCC---------------------------------CeEEEEEeeecCCCCcc
Confidence 1 135566677777776654 67777776543 334
Q ss_pred EEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCC
Q 040693 157 WYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPG 236 (382)
Q Consensus 157 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~ 236 (382)
........ + +..+.. .+..++++..++.+..+| +++..........
T Consensus 98 ~~~~~~~~----------------------------~-i~~~~~---~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~ 143 (313)
T 3odt_A 98 YTLIGHQG----------------------------N-VCSLSF---QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNA 143 (313)
T ss_dssp CEECCCSS----------------------------C-EEEEEE---ETTEEEEEETTSEEEEEE--TTEEEEEEECCSS
T ss_pred cchhhccc----------------------------C-EEEEEe---cCCEEEEEeCCCCEEEEc--CCcEEEecccCCC
Confidence 33322211 1 122222 256888899999999999 6777777764321
Q ss_pred CCCCCcccceee---eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEE
Q 040693 237 GLGGGAMWGAAT---DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLF 313 (382)
Q Consensus 237 ~~~g~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~ 313 (382)
....... +++.++++ ..++.|..+| .++....................++.++
T Consensus 144 -----~v~~~~~~~~~~~~l~~~-----------------~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 199 (313)
T 3odt_A 144 -----SVWDAKVVSFSENKFLTA-----------------SADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFI 199 (313)
T ss_dssp -----CEEEEEEEETTTTEEEEE-----------------ETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEE
T ss_pred -----ceeEEEEccCCCCEEEEE-----------------ECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEE
Confidence 2222111 45666665 3457899999 4555555543221111122223456666
Q ss_pred EeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEeCceeEeecCCccCCCCCeEEEEE
Q 040693 314 GGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGNGYKVTVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 314 ~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~~ 381 (382)
.++ .++.|..+|..+++.+.++............ .+++|+.++.+|. +.+| |..+++.+..+.
T Consensus 200 ~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~-v~iw--d~~~~~~~~~~~ 263 (313)
T 3odt_A 200 SCS--NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRT-VRIW--SKENGSLKQVIT 263 (313)
T ss_dssp EEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSE-EEEE--CTTTCCEEEEEE
T ss_pred Ecc--CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCE-EEEE--ECCCCceeEEEe
Confidence 666 4999999999999999998755443444444 3557777777766 4444 455678777654
No 68
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.78 E-value=3.4e-06 Score=88.03 Aligned_cols=228 Identities=11% Similarity=0.034 Sum_probs=138.5
Q ss_pred cCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCC
Q 040693 3 KRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLN 82 (382)
Q Consensus 3 d~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~ 82 (382)
|..+|+.+.+......+...+..+| .+..++++.. ++.|..+|..+|+.+.+.......
T Consensus 41 d~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~--------------dg~i~vw~~~~~~~~~~~~~~~~~----- 99 (814)
T 3mkq_A 41 NYETQVEVRSIQVTETPVRAGKFIA--RKNWIIVGSD--------------DFRIRVFNYNTGEKVVDFEAHPDY----- 99 (814)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEEEG--GGTEEEEEET--------------TSEEEEEETTTCCEEEEEECCSSC-----
T ss_pred ECCCCceEEEEecCCCcEEEEEEeC--CCCEEEEEeC--------------CCeEEEEECCCCcEEEEEecCCCC-----
Confidence 4556666555553322222222222 2345666654 889999999999998887642111
Q ss_pred CCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecC
Q 040693 83 EYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLG 162 (382)
Q Consensus 83 ~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~ 162 (382)
+ ....+.+++..++.+..+ +.|..+|..++...-+.-..
T Consensus 100 ------v--~~~~~s~~~~~l~~~~~d---------------------------------g~i~vw~~~~~~~~~~~~~~ 138 (814)
T 3mkq_A 100 ------I--RSIAVHPTKPYVLSGSDD---------------------------------LTVKLWNWENNWALEQTFEG 138 (814)
T ss_dssp ------E--EEEEECSSSSEEEEEETT---------------------------------SEEEEEEGGGTSEEEEEEEC
T ss_pred ------E--EEEEEeCCCCEEEEEcCC---------------------------------CEEEEEECCCCceEEEEEcC
Confidence 1 135666676677766543 88999998877433222111
Q ss_pred CCcccccccccCCCCCCCCCCCCCCCCCCCceE-EEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCC
Q 040693 163 GYDVWFGACNWYLNPNCPPGPSPDADFGEAPMM-LSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGG 241 (382)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~ 241 (382)
.. .++. ....+. .+..++++..++.+..+|..+++...............
T Consensus 139 ~~---------------------------~~v~~~~~~p~--~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~ 189 (814)
T 3mkq_A 139 HE---------------------------HFVMCVAFNPK--DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNY 189 (814)
T ss_dssp CS---------------------------SCEEEEEEETT--EEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCE
T ss_pred CC---------------------------CcEEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEE
Confidence 11 1111 112221 15678888999999999999998888876543111111
Q ss_pred cccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecC
Q 040693 242 AMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYR 319 (382)
Q Consensus 242 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~ 319 (382)
..+.+..++..++++ ..++.|..+|..+++.+.+....... ...+.. ++.+++.++ .
T Consensus 190 ~~~~~~~~~~~l~~~-----------------~~dg~i~~~d~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~--~ 248 (814)
T 3mkq_A 190 VDYYPLPDKPYMITA-----------------SDDLTIKIWDYQTKSCVATLEGHMSN--VSFAVFHPTLPIIISGS--E 248 (814)
T ss_dssp EEECCSTTCCEEEEE-----------------CTTSEEEEEETTTTEEEEEEECCSSC--EEEEEECSSSSEEEEEE--T
T ss_pred EEEEECCCCCEEEEE-----------------eCCCEEEEEECCCCcEEEEEcCCCCC--EEEEEEcCCCCEEEEEe--C
Confidence 122221145566665 44588999999999998887654321 122222 235666666 4
Q ss_pred CCcEEEEeCCCCcEeEEEecCCc
Q 040693 320 QGPIYAMDVKTGKILWSYDTGAT 342 (382)
Q Consensus 320 ~g~l~~ld~~tG~ilw~~~~~~~ 342 (382)
+|.|..+|..+++.++.+.....
T Consensus 249 dg~v~vwd~~~~~~~~~~~~~~~ 271 (814)
T 3mkq_A 249 DGTLKIWNSSTYKVEKTLNVGLE 271 (814)
T ss_dssp TSCEEEEETTTCSEEEEECCSSS
T ss_pred CCeEEEEECCCCcEEEEeecCCC
Confidence 89999999999999999876644
No 69
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=98.76 E-value=3.1e-06 Score=83.96 Aligned_cols=109 Identities=17% Similarity=0.189 Sum_probs=71.7
Q ss_pred cceEEEEECCC---CcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc-----
Q 040693 142 SNSLLALDLDT---GKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK----- 213 (382)
Q Consensus 142 ~g~v~ald~~t---G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~----- 213 (382)
...+||||..+ .+++|++........ -...+.|.|..+. ++ +..++++..
T Consensus 163 G~~~yALDVT~P~~p~~LWe~~~~~~~~L-------------------G~t~s~P~I~~~~-~g--~w~~vfG~GY~~~~ 220 (570)
T 3hx6_A 163 GKGLFALDVTDPANIKLLWEIGVDQEPDL-------------------GYSFPKPTVARLH-NG--KWAVVTGNGYSSMN 220 (570)
T ss_dssp CSEEEEEECSSGGGCEEEEEEETTTCTTC-------------------CBCCSCCEEEECT-TS--SEEEEEECCBSCTT
T ss_pred CcEEEEEECCCCCCCceeEEECCCCcccc-------------------CccccCCEEEEec-CC--CEEEEEccccCCCC
Confidence 46899999765 899999984332111 1133788888654 33 456666653
Q ss_pred -CcEEEEEeCCCCCeeeeeccCCCCCCCCccccee-ee------CCeEEEEecCccccccccCCCCCCCCCceEEEEECC
Q 040693 214 -SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAA-TD------ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS 285 (382)
Q Consensus 214 -~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~-~~------~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~ 285 (382)
...||.+|++||+++|++..+...........+. +| -+.+|++ +..|+|+.||+.
T Consensus 221 ~~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaG-----------------Dl~GnlWRfDl~ 283 (570)
T 3hx6_A 221 DKAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAG-----------------DLQGNLWRFDLI 283 (570)
T ss_dssp CCEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEE-----------------ETTSEEEEEECS
T ss_pred CccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEE-----------------eCCCcEEEEEcC
Confidence 4589999999999999998653211111112222 22 2578887 677999999998
Q ss_pred CCcE
Q 040693 286 NGNV 289 (382)
Q Consensus 286 tG~~ 289 (382)
+...
T Consensus 284 ~~~~ 287 (570)
T 3hx6_A 284 AGKV 287 (570)
T ss_dssp CSSC
T ss_pred CCCc
Confidence 8765
No 70
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.75 E-value=1.5e-06 Score=82.66 Aligned_cols=227 Identities=12% Similarity=0.022 Sum_probs=136.2
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+| .+|+.+.+...... .+ ....+.+++..++.+..+
T Consensus 129 dg~i~i~~-~~~~~~~~~~~~~~-----------~v--~~~~~~~~~~~l~~~~~d------------------------ 170 (425)
T 1r5m_A 129 NGELRLWN-KTGALLNVLNFHRA-----------PI--VSVKWNKDGTHIISMDVE------------------------ 170 (425)
T ss_dssp TSCEEEEE-TTSCEEEEECCCCS-----------CE--EEEEECTTSSEEEEEETT------------------------
T ss_pred CCeEEEEe-CCCCeeeeccCCCc-----------cE--EEEEECCCCCEEEEEecC------------------------
Confidence 88999999 68888887653211 11 135566666677776543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+++.+.++...........+.... +.........+. .++.++++..
T Consensus 171 ---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-------~~~~~~~~~~ 225 (425)
T 1r5m_A 171 ---------NVTILWNVISGTVMQHFELKETGGSSINAENHS---------GDGSLGVDVEWV-------DDDKFVIPGP 225 (425)
T ss_dssp ---------CCEEEEETTTTEEEEEECCC------------------------CCCBSCCEEE-------ETTEEEEECG
T ss_pred ---------CeEEEEECCCCcEEEEeeccccCccceeecccc---------CCcceeeEEEEc-------CCCEEEEEcC
Confidence 889999999999999887654310000000000 000000111111 2567888999
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
++.+..+|..+++.+..+.... ........ ++..++++ ..++.|..+|.++++.+.
T Consensus 226 ~g~i~~~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~-----------------~~d~~i~i~d~~~~~~~~ 283 (425)
T 1r5m_A 226 KGAIFVYQITEKTPTGKLIGHH-----GPISVLEFNDTNKLLLSA-----------------SDDGTLRIWHGGNGNSQN 283 (425)
T ss_dssp GGCEEEEETTCSSCSEEECCCS-----SCEEEEEEETTTTEEEEE-----------------ETTSCEEEECSSSBSCSE
T ss_pred CCeEEEEEcCCCceeeeeccCC-----CceEEEEECCCCCEEEEE-----------------cCCCEEEEEECCCCccce
Confidence 9999999999998888776322 12222222 45556655 345789999999999888
Q ss_pred eecCCCCCCCCcceEE-eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeCceeEeecCC
Q 040693 292 STADPSNGTAPGPVTV-ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNGYKVTVGFGN 368 (382)
Q Consensus 292 ~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~g~~~~~~~ 368 (382)
........ ...+.. .+++++.++ .++.|..+|..+++.+..+...........+ .+..|++++.+|. +.+|.
T Consensus 284 ~~~~~~~~--i~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~i~~ 358 (425)
T 1r5m_A 284 CFYGHSQS--IVSASWVGDDKVISCS--MDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQ-VNVYD 358 (425)
T ss_dssp EECCCSSC--EEEEEEETTTEEEEEE--TTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSC-EEEEE
T ss_pred EecCCCcc--EEEEEECCCCEEEEEe--CCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCe-EEEEE
Confidence 87643321 222223 245666666 4899999999999999988764433333333 2344555555554 45555
Q ss_pred cc
Q 040693 369 KN 370 (382)
Q Consensus 369 ~~ 370 (382)
+.
T Consensus 359 ~~ 360 (425)
T 1r5m_A 359 LK 360 (425)
T ss_dssp CH
T ss_pred CC
Confidence 44
No 71
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.75 E-value=8.8e-06 Score=74.81 Aligned_cols=224 Identities=16% Similarity=0.119 Sum_probs=136.2
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|..+|+.+-....... .+ ....+.+++..++.+..+
T Consensus 44 dg~i~iw~~~~~~~~~~~~~h~~-----------~v--~~~~~~~~~~~l~s~~~d------------------------ 86 (312)
T 4ery_A 44 DKLIKIWGAYDGKFEKTISGHKL-----------GI--SDVAWSSDSNLLVSASDD------------------------ 86 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCCSS-----------CE--EEEEECTTSSEEEEEETT------------------------
T ss_pred CCeEEEEeCCCcccchhhccCCC-----------ce--EEEEEcCCCCEEEEECCC------------------------
Confidence 88999999999988766542110 01 134566666677666543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+++.+-.++.....+. -..+..+ +..++++..
T Consensus 87 ---------~~i~vwd~~~~~~~~~~~~~~~~v~---------------------------~~~~~~~---~~~l~s~~~ 127 (312)
T 4ery_A 87 ---------KTLKIWDVSSGKCLKTLKGHSNYVF---------------------------CCNFNPQ---SNLIVSGSF 127 (312)
T ss_dssp ---------SEEEEEETTTCCEEEEEECCSSCEE---------------------------EEEECSS---SSEEEEEET
T ss_pred ---------CEEEEEECCCCcEEEEEcCCCCCEE---------------------------EEEEcCC---CCEEEEEeC
Confidence 8999999999998877754432111 0111122 467888899
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
++.+..+|..+++.+..+.... ........ ++..++.+ ..++.|..+|.++++.+-
T Consensus 128 d~~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~-----------------~~d~~i~~wd~~~~~~~~ 185 (312)
T 4ery_A 128 DESVRIWDVKTGKCLKTLPAHS-----DPVSAVHFNRDGSLIVSS-----------------SYDGLCRIWDTASGQCLK 185 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCCS-----SCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTTCCEEE
T ss_pred CCcEEEEECCCCEEEEEecCCC-----CcEEEEEEcCCCCEEEEE-----------------eCCCcEEEEECCCCceee
Confidence 9999999999999887766322 12222222 34555554 345889999999999877
Q ss_pred eecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCc----eecceEEeCCEEEEEeCceeEee
Q 040693 292 STADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGAT----IYGGASVSNGCIYMGNGYKVTVG 365 (382)
Q Consensus 292 ~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~----~~~~p~~~~g~lyv~~~~g~~~~ 365 (382)
+....... ....+.+ ++..++.++ .++.|..+|..+++.+.++..... ........+++++++.+....+.
T Consensus 186 ~~~~~~~~-~~~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~ 262 (312)
T 4ery_A 186 TLIDDDNP-PVSFVKFSPNGKYILAAT--LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 262 (312)
T ss_dssp EECCSSCC-CEEEEEECTTSSEEEEEE--TTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEE
T ss_pred EEeccCCC-ceEEEEECCCCCEEEEEc--CCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEE
Confidence 66433211 1112223 245666666 489999999999999887754322 11112223555555544333345
Q ss_pred cCCccCCCCCeEEEE
Q 040693 366 FGNKNFTSGTSLYAF 380 (382)
Q Consensus 366 ~~~~~~~~g~~l~~~ 380 (382)
+|.+ .+++.+-.+
T Consensus 263 vwd~--~~~~~~~~~ 275 (312)
T 4ery_A 263 IWNL--QTKEIVQKL 275 (312)
T ss_dssp EEET--TTCCEEEEE
T ss_pred EEEC--CCchhhhhh
Confidence 5544 456665544
No 72
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.74 E-value=8.6e-06 Score=76.07 Aligned_cols=161 Identities=9% Similarity=0.074 Sum_probs=84.4
Q ss_pred EEeeeCceeecEEEEEccCcEEEEEeCC-CCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCC
Q 040693 196 LSMYRNKVKHDIVVAVQKSGFAWALDRD-SGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKN 272 (382)
Q Consensus 196 ~~~~~~g~~~~~v~~~~~~g~l~ald~~-tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~ 272 (382)
..+.++| . +++....++.+..+|.. +|++.-....... .+......++ ++..+|+...
T Consensus 146 ~~~spdg--~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~--~g~~p~~~~~spdg~~l~v~~~-------------- 206 (347)
T 3hfq_A 146 TDLTPDN--R-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTME--AGFGPRHLVFSPDGQYAFLAGE-------------- 206 (347)
T ss_dssp EEECTTS--C-EEEEETTTTEEEEEEECTTSCEEEEEEEECC--TTCCEEEEEECTTSSEEEEEET--------------
T ss_pred EEECCCC--c-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcC--CCCCCceEEECCCCCEEEEEeC--------------
Confidence 3344455 3 55555667789888887 6765433221110 1111111222 5566777532
Q ss_pred CCCCceEEEEECC--CCcEEeeecCCCCCC------CCcceEEe--CCEEEEeeecCCCcEEEEeCC-CC--cEeEEEec
Q 040693 273 STIAGGWVAMDAS--NGNVLWSTADPSNGT------APGPVTVA--NGVLFGGSTYRQGPIYAMDVK-TG--KILWSYDT 339 (382)
Q Consensus 273 ~~~~g~v~a~d~~--tG~~~W~~~~~~~~~------~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~-tG--~ilw~~~~ 339 (382)
..+.+..++.. +|+..-......... ....+.+. +.++|+... .++.|..+|.+ +| +.+...+.
T Consensus 207 --~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~-~~~~v~v~~~~~~g~~~~~~~~~~ 283 (347)
T 3hfq_A 207 --LSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR-GYNTLAVFAVTADGHLTLIQQIST 283 (347)
T ss_dssp --TTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE-TTTEEEEEEECGGGCEEEEEEEEC
T ss_pred --CCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC-CCCEEEEEEECCCCcEEEeEEEec
Confidence 23555555544 676533222111000 01113332 456777664 46788888876 34 33444444
Q ss_pred CCceecceEE--eCCEEEEEeCceeEeecCCccCCCCCeEE
Q 040693 340 GATIYGGASV--SNGCIYMGNGYKVTVGFGNKNFTSGTSLY 378 (382)
Q Consensus 340 ~~~~~~~p~~--~~g~lyv~~~~g~~~~~~~~~~~~g~~l~ 378 (382)
.+......++ .+..||+++.....+.+|.+|..+|++.-
T Consensus 284 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 284 EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 2222233334 34468998877666888999999998763
No 73
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.73 E-value=2.9e-05 Score=70.43 Aligned_cols=234 Identities=11% Similarity=0.095 Sum_probs=134.8
Q ss_pred cCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCC
Q 040693 31 KGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNL 110 (382)
Q Consensus 31 ~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~ 110 (382)
++.+|++.. .++.|+.+|++ |+.+++......... .... . ...+++...+.+|++...
T Consensus 40 ~g~l~v~~~-------------~~~~i~~~d~~-g~~~~~~~~~~~~~~---~~~~--p--~~i~~~~~~g~l~v~~~~- 97 (286)
T 1q7f_A 40 QNDIIVADT-------------NNHRIQIFDKE-GRFKFQFGECGKRDS---QLLY--P--NRVAVVRNSGDIIVTERS- 97 (286)
T ss_dssp TCCEEEEEG-------------GGTEEEEECTT-SCEEEEECCBSSSTT---CBSS--E--EEEEEETTTTEEEEEECG-
T ss_pred CCCEEEEEC-------------CCCEEEEECCC-CcEEEEecccCCCcc---cccC--c--eEEEEEcCCCeEEEEcCC-
Confidence 477888754 27789999985 888887654211110 0000 0 123454455788887631
Q ss_pred CCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCC
Q 040693 111 YSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFG 190 (382)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (382)
..+.|+.+| .+|+.+.++.....
T Consensus 98 ------------------------------~~~~i~~~d-~~g~~~~~~~~~~~-------------------------- 120 (286)
T 1q7f_A 98 ------------------------------PTHQIQIYN-QYGQFVRKFGATIL-------------------------- 120 (286)
T ss_dssp ------------------------------GGCEEEEEC-TTSCEEEEECTTTC--------------------------
T ss_pred ------------------------------CCCEEEEEC-CCCcEEEEecCccC--------------------------
Confidence 027899999 67998877644321
Q ss_pred CCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCC
Q 040693 191 EAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKP 269 (382)
Q Consensus 191 ~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~ 269 (382)
..|.-..+..+ +.++++...++.++.+|. +|+.++.+..... .....+.++ .++.+|++..
T Consensus 121 ~~~~~i~~~~~---g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~----------- 182 (286)
T 1q7f_A 121 QHPRGVTVDNK---GRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKH---LEFPNGVVVNDKQEIFISDN----------- 182 (286)
T ss_dssp SCEEEEEECTT---SCEEEEETTTTEEEEECT-TSCEEEEEECTTT---CSSEEEEEECSSSEEEEEEG-----------
T ss_pred CCceEEEEeCC---CCEEEEECCCCEEEEEcC-CCCEEEEeCCCCc---cCCcEEEEECCCCCEEEEEC-----------
Confidence 12222222222 234444456788999996 4888777653211 112223333 3567888632
Q ss_pred CCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEe-CCEEEEeeecCCC-cEEEEeCCCCcEeEEEecCCce--ec
Q 040693 270 SKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVA-NGVLFGGSTYRQG-PIYAMDVKTGKILWSYDTGATI--YG 345 (382)
Q Consensus 270 ~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~g-~l~~ld~~tG~ilw~~~~~~~~--~~ 345 (382)
..+.|..+|+ +|+.+.++...........+.++ ++.+|++.. .++ .|..+|. +|+.+..+...... ..
T Consensus 183 -----~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~-~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~ 254 (286)
T 1q7f_A 183 -----RAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADN-HNNFNLTIFTQ-DGQLISALESKVKHAQCF 254 (286)
T ss_dssp -----GGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEEC-SSSCEEEEECT-TSCEEEEEEESSCCSCEE
T ss_pred -----CCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeC-CCCEEEEEECC-CCCEEEEEcccCCCCcce
Confidence 2467999997 67777776543211112234444 567888774 344 8999996 58888887654322 11
Q ss_pred ceEE-eCCEEEEEeCceeEeecCCcc
Q 040693 346 GASV-SNGCIYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 346 ~p~~-~~g~lyv~~~~g~~~~~~~~~ 370 (382)
..++ .+|+||+++.++ .+.+|.+.
T Consensus 255 ~i~~~~~g~l~vs~~~~-~v~v~~~~ 279 (286)
T 1q7f_A 255 DVALMDDGSVVLASKDY-RLYIYRYV 279 (286)
T ss_dssp EEEEETTTEEEEEETTT-EEEEEECS
T ss_pred eEEECCCCcEEEECCCC-eEEEEEcc
Confidence 2333 478999997654 34555543
No 74
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.73 E-value=2.3e-06 Score=86.61 Aligned_cols=221 Identities=14% Similarity=0.077 Sum_probs=134.4
Q ss_pred cCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCC
Q 040693 31 KGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNL 110 (382)
Q Consensus 31 ~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~ 110 (382)
++++||.... ++.|..+|.+|++++.+..++.... ...+++++.++|++..+
T Consensus 166 ~~~~~V~~~~-------------~~~V~viD~~t~~v~~~i~~g~~p~--------------~v~~SpDGr~lyv~~~d- 217 (567)
T 1qks_A 166 ENLFSVTLRD-------------AGQIALIDGSTYEIKTVLDTGYAVH--------------ISRLSASGRYLFVIGRD- 217 (567)
T ss_dssp GGEEEEEETT-------------TTEEEEEETTTCCEEEEEECSSCEE--------------EEEECTTSCEEEEEETT-
T ss_pred CceEEEEeCC-------------CCeEEEEECCCCeEEEEEeCCCCcc--------------ceEECCCCCEEEEEcCC-
Confidence 4678887652 7899999999999999988743211 35788888899997543
Q ss_pred CCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECC--CCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCC
Q 040693 111 YSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLD--TGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDAD 188 (382)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~--tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (382)
+.|..||.. |++++.+.+...
T Consensus 218 --------------------------------g~V~viD~~~~t~~~v~~i~~G~------------------------- 240 (567)
T 1qks_A 218 --------------------------------GKVNMIDLWMKEPTTVAEIKIGS------------------------- 240 (567)
T ss_dssp --------------------------------SEEEEEETTSSSCCEEEEEECCS-------------------------
T ss_pred --------------------------------CeEEEEECCCCCCcEeEEEecCC-------------------------
Confidence 789999996 999998776542
Q ss_pred CCCCceEEEee----eCceeecEEEEE-ccCcEEEEEeCCCCCeeeeeccCCCCCCC------Cccccee-e-eCCeEEE
Q 040693 189 FGEAPMMLSMY----RNKVKHDIVVAV-QKSGFAWALDRDSGSLIWSMEAGPGGLGG------GAMWGAA-T-DERRIYT 255 (382)
Q Consensus 189 ~~~~p~~~~~~----~~g~~~~~v~~~-~~~g~l~ald~~tG~~~W~~~~~~~~~~g------~~~~~~~-~-~~~~v~~ 255 (382)
.|.-..++ .+| ..+++. ...+.+..+|..|.+++..+........+ ....... . ++...++
T Consensus 241 ---~P~~ia~s~~~~pDG---k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv 314 (567)
T 1qks_A 241 ---EARSIETSKMEGWED---KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIV 314 (567)
T ss_dssp ---EEEEEEECCSTTCTT---TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEE
T ss_pred ---CCceeEEccccCCCC---CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEE
Confidence 23323333 133 345544 44588999999999999988754211000 0011111 1 2333444
Q ss_pred EecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCC-CCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEe
Q 040693 256 NIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGT-APGPVTVANGVLFGGSTYRQGPIYAMDVKTGKIL 334 (382)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~il 334 (382)
.. ...|.|..+|.++.+.+=...+..... ....+.-++.++|++.. ..+.|.++|.++++++
T Consensus 315 ~~----------------~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~-~sn~V~ViD~~t~kl~ 377 (567)
T 1qks_A 315 NV----------------KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN-ARNKLVVIDTKEGKLV 377 (567)
T ss_dssp EE----------------TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG-GGTEEEEEETTTTEEE
T ss_pred Ee----------------cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeC-CCCeEEEEECCCCcEE
Confidence 32 234788888887765332222221111 01111113456777664 5788999999999999
Q ss_pred EEEec-CC-cee-cceE-Ee--CCEEEEEeC
Q 040693 335 WSYDT-GA-TIY-GGAS-VS--NGCIYMGNG 359 (382)
Q Consensus 335 w~~~~-~~-~~~-~~p~-~~--~g~lyv~~~ 359 (382)
...++ +. ..- ..+. +. .+.+|+++.
T Consensus 378 ~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~ 408 (567)
T 1qks_A 378 AIEDTGGQTPHPGRGANFVHPTFGPVWATSH 408 (567)
T ss_dssp EEEECSSSSBCCTTCEEEEETTTEEEEEEEB
T ss_pred EEEeccCcCCCCccceeeECCCCCcEEEeCC
Confidence 99988 32 111 1222 22 367777654
No 75
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.70 E-value=2e-05 Score=75.44 Aligned_cols=237 Identities=14% Similarity=0.031 Sum_probs=133.5
Q ss_pred eEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCC
Q 040693 56 SLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKC 135 (382)
Q Consensus 56 ~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (382)
.|+.+|.+|++++-+.+.+.. ..+.+.+++..+|+..... .+
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~---------------p~i~~spDg~~lyv~n~~~-----------------------~~ 89 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFL---------------PNPVAAHSGSEFALASTSF-----------------------SR 89 (373)
T ss_pred EEEEEECCCCeEEEEecCCCC---------------CCeEECCCCCEEEEEeccc-----------------------cc
Confidence 789999999999866554211 1367888999999975310 00
Q ss_pred CCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEc-c-
Q 040693 136 IEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQ-K- 213 (382)
Q Consensus 136 ~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~-~- 213 (382)
..-+..++.|..||++|++++-+......... .....|.-..+.++| ..+++.. .
T Consensus 90 ~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~--------------------~~g~~p~~~~~spDG---~~l~v~n~~~ 146 (373)
T 2mad_H 90 IAKGKRTDYVEVFDPVTFLPIADIELPDAPRF--------------------DVGPYSWMNANTPNN---ADLLFFQFAA 146 (373)
T ss_pred cccCCCCCeEEEEECCCCcEEEEEECCCcccc--------------------ccCCCccceEECCCC---CEEEEEecCC
Confidence 00011236799999999999988876521000 000123222333344 4566554 3
Q ss_pred CcEEEEEeCCCCCeeee-eccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEee
Q 040693 214 SGFAWALDRDSGSLIWS-MEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWS 292 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~-~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~ 292 (382)
++.+..+| ++++++-. .+.+. + .....+++..|+.. ..++.+..+|. +|+..++
T Consensus 147 ~~~v~viD-~t~~~~~~~i~~~~-----~--~~~~~~~~~~~~~~----------------~~dg~~~~vd~-~g~~~~~ 201 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQLLSSPT-----C--YHIHPGAPSTFYLL----------------CAQGGLAKTDH-AGGAAGA 201 (373)
T ss_pred CCeEEEEE-CCCCEEeEEcCCCc-----e--EEEEeCCCceEEEE----------------cCCCCEEEEEC-CCcEEEE
Confidence 57899999 99999877 66431 1 11112444555543 34588999999 9999876
Q ss_pred ecCCC-----CCCCCcc-eEEeCCEEEEeeecCCCcEEEEeCCCCcE--eEEEecC-----------Ccee-cceEEeCC
Q 040693 293 TADPS-----NGTAPGP-VTVANGVLFGGSTYRQGPIYAMDVKTGKI--LWSYDTG-----------ATIY-GGASVSNG 352 (382)
Q Consensus 293 ~~~~~-----~~~~~~~-~~~~~~~v~~~~~~~~g~l~~ld~~tG~i--lw~~~~~-----------~~~~-~~p~~~~g 352 (382)
..... ......+ ...+++.+|+.+. .+.++.+|..+++. +-++++. .+.. ......++
T Consensus 202 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~ 279 (373)
T 2mad_H 202 GLVGAMLTAAQNLLTQPAQANKSGRIVWPVY--SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSD 279 (373)
T ss_pred EeccccccCCcceeecceeEecCCEEEEEcC--CceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCC
Confidence 54211 0100111 1223444444443 78999999976632 2222221 1100 01111568
Q ss_pred EEEEEeCcee-------EeecCCccCCCCCeEEEE
Q 040693 353 CIYMGNGYKV-------TVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 353 ~lyv~~~~g~-------~~~~~~~~~~~g~~l~~~ 380 (382)
+||+....+. ...++.+|..+++.+-..
T Consensus 280 ~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i 314 (373)
T 2mad_H 280 GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI 314 (373)
T ss_pred EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE
Confidence 9999865321 123566788888776544
No 76
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.70 E-value=1.1e-05 Score=74.07 Aligned_cols=144 Identities=10% Similarity=0.052 Sum_probs=89.6
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+..++++..++.+..+|..+++.+..+.... ........ ++..++++ ..++.|..+
T Consensus 153 ~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~-----------------~~dg~i~~~ 210 (337)
T 1gxr_A 153 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-----DGASCIDISNDGTKLWTG-----------------GLDNTVRSW 210 (337)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCS-----SCEEEEEECTTSSEEEEE-----------------ETTSEEEEE
T ss_pred CCEEEEEeCCCcEEEEeCCCCceeeeeeccc-----CceEEEEECCCCCEEEEE-----------------ecCCcEEEE
Confidence 4678888889999999999999888776422 12222222 45566665 345889999
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCE-EEEEe
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGC-IYMGN 358 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~-lyv~~ 358 (382)
|.++++.+.+...... ...+.+ ++..+++++ .++.|+.+|..+++... ............. .+++ |+.++
T Consensus 211 d~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~--~~~~i~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~ 284 (337)
T 1gxr_A 211 DLREGRQLQQHDFTSQ---IFSLGYCPTGEWLAVGM--ESSNVEVLHVNKPDKYQ-LHLHESCVLSLKFAYCGKWFVSTG 284 (337)
T ss_dssp ETTTTEEEEEEECSSC---EEEEEECTTSSEEEEEE--TTSCEEEEETTSSCEEE-ECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ECCCCceEeeecCCCc---eEEEEECCCCCEEEEEc--CCCcEEEEECCCCCeEE-EcCCccceeEEEECCCCCEEEEec
Confidence 9999999988875432 122223 245677766 48999999999888653 3222222223333 2444 44455
Q ss_pred CceeEeecCCccCCCCCeEEE
Q 040693 359 GYKVTVGFGNKNFTSGTSLYA 379 (382)
Q Consensus 359 ~~g~~~~~~~~~~~~g~~l~~ 379 (382)
.+|. +.+|. ..+++.+..
T Consensus 285 ~dg~-i~~~~--~~~~~~~~~ 302 (337)
T 1gxr_A 285 KDNL-LNAWR--TPYGASIFQ 302 (337)
T ss_dssp TTSE-EEEEE--TTTCCEEEE
T ss_pred CCCc-EEEEE--CCCCeEEEE
Confidence 5544 44554 445666643
No 77
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.69 E-value=5.5e-06 Score=77.12 Aligned_cols=210 Identities=16% Similarity=0.080 Sum_probs=126.7
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|..+++.+.++..... .+ ....+.+++..++.+..+
T Consensus 53 dg~i~vwd~~~~~~~~~~~~h~~-----------~v--~~~~~~~~~~~l~s~~~d------------------------ 95 (369)
T 3zwl_B 53 DSSASVWYSLNGERLGTLDGHTG-----------TI--WSIDVDCFTKYCVTGSAD------------------------ 95 (369)
T ss_dssp SSCEEEEETTTCCEEEEECCCSS-----------CE--EEEEECTTSSEEEEEETT------------------------
T ss_pred CCEEEEEeCCCchhhhhhhhcCC-----------cE--EEEEEcCCCCEEEEEeCC------------------------
Confidence 88999999999999887753111 11 135566666677666543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+++.+..+..... ..-.....+ +..++++..
T Consensus 96 ---------g~i~iwd~~~~~~~~~~~~~~~----------------------------v~~~~~~~~---~~~l~~~~~ 135 (369)
T 3zwl_B 96 ---------YSIKLWDVSNGQCVATWKSPVP----------------------------VKRVEFSPC---GNYFLAILD 135 (369)
T ss_dssp ---------TEEEEEETTTCCEEEEEECSSC----------------------------EEEEEECTT---SSEEEEEEC
T ss_pred ---------CeEEEEECCCCcEEEEeecCCC----------------------------eEEEEEccC---CCEEEEecC
Confidence 8999999999999998873321 111111222 356666666
Q ss_pred C-----cEEEEEeCCCCCeeeeeccCCCCC-------CC-Ccccceee--eCCeEEEEecCccccccccCCCCCCCCCce
Q 040693 214 S-----GFAWALDRDSGSLIWSMEAGPGGL-------GG-GAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGG 278 (382)
Q Consensus 214 ~-----g~l~ald~~tG~~~W~~~~~~~~~-------~g-~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~ 278 (382)
+ +.+..+|..+++............ .+ ........ ++..++++ ..++.
T Consensus 136 ~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------~~dg~ 198 (369)
T 3zwl_B 136 NVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG-----------------HKDGK 198 (369)
T ss_dssp CBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE-----------------ETTSE
T ss_pred CccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEE-----------------cCCCE
Confidence 6 889888888776544333211000 00 01111111 44555555 34588
Q ss_pred EEEEECCC-CcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEE
Q 040693 279 WVAMDASN-GNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCI 354 (382)
Q Consensus 279 v~a~d~~t-G~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~l 354 (382)
|..+|+++ ++.+......... ...+.+ ++.+++.++ .++.|..+|..+++.+..+............ .+..+
T Consensus 199 i~i~d~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l 274 (369)
T 3zwl_B 199 ISKYDVSNNYEYVDSIDLHEKS--ISDMQFSPDLTYFITSS--RDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFI 274 (369)
T ss_dssp EEEEETTTTTEEEEEEECCSSC--EEEEEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEE
T ss_pred EEEEECCCCcEeEEEEecCCCc--eeEEEECCCCCEEEEec--CCceEEEEECCCCceeeeecCCCCceeEEecCCCceE
Confidence 99999999 6777777654321 122223 345666666 4899999999999999998855443322222 34555
Q ss_pred EEEeCce
Q 040693 355 YMGNGYK 361 (382)
Q Consensus 355 yv~~~~g 361 (382)
++++.++
T Consensus 275 ~~~~~~~ 281 (369)
T 3zwl_B 275 ILGGGQE 281 (369)
T ss_dssp EEEECCC
T ss_pred EEeecCC
Confidence 5555544
No 78
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.68 E-value=8.3e-06 Score=77.97 Aligned_cols=222 Identities=10% Similarity=0.102 Sum_probs=136.8
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.++++.+....... ..+ ....+.+++..++.+..+
T Consensus 118 dg~i~iwd~~~~~~~~~~~~h~-----------~~v--~~~~~~~~~~~l~s~s~d------------------------ 160 (420)
T 3vl1_A 118 EGDIKVLDSNFNLQREIDQAHV-----------SEI--TKLKFFPSGEALISSSQD------------------------ 160 (420)
T ss_dssp TSCEEEECTTSCEEEEETTSSS-----------SCE--EEEEECTTSSEEEEEETT------------------------
T ss_pred CCCEEEEeCCCcceeeeccccc-----------Ccc--EEEEECCCCCEEEEEeCC------------------------
Confidence 7889999998888766542210 111 235566666677766543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+++.+.++......+ .-..+..+ +..++++..
T Consensus 161 ---------~~i~iwd~~~~~~~~~~~~h~~~v---------------------------~~~~~~~~---~~~l~s~~~ 201 (420)
T 3vl1_A 161 ---------MQLKIWSVKDGSNPRTLIGHRATV---------------------------TDIAIIDR---GRNVLSASL 201 (420)
T ss_dssp ---------SEEEEEETTTCCCCEEEECCSSCE---------------------------EEEEEETT---TTEEEEEET
T ss_pred ---------CeEEEEeCCCCcCceEEcCCCCcE---------------------------EEEEEcCC---CCEEEEEcC
Confidence 899999999999887775432211 11112222 467888889
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCC-------------------Ccccceee--eCCeEEEEecCccccccccCCCCC
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGG-------------------GAMWGAAT--DERRIYTNIANSQHKNFNLKPSKN 272 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g-------------------~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~ 272 (382)
|+.+..+|..+++.+..+......... ........ ++..++++
T Consensus 202 d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~---------------- 265 (420)
T 3vl1_A 202 DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAG---------------- 265 (420)
T ss_dssp TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEE----------------
T ss_pred CCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEE----------------
Confidence 999999999999999888743210000 00000011 33444444
Q ss_pred CCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEe--CC-EEEEeeecCCCcEEEEeCCCCcE-eEEEec-CCceecce
Q 040693 273 STIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVA--NG-VLFGGSTYRQGPIYAMDVKTGKI-LWSYDT-GATIYGGA 347 (382)
Q Consensus 273 ~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~--~~-~v~~~~~~~~g~l~~ld~~tG~i-lw~~~~-~~~~~~~p 347 (382)
..++.|..+|+++++...+....... ....+... +. +++.++ .+|.|..+|..+++. +.++.. ........
T Consensus 266 -~~dg~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~g~--~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 341 (420)
T 3vl1_A 266 -HVSGVITVHNVFSKEQTIQLPSKFTC-SCNSLTVDGNNANYIYAGY--ENGMLAQWDLRSPECPVGEFLINEGTPINNV 341 (420)
T ss_dssp -ETTSCEEEEETTTCCEEEEECCTTSS-CEEEEEECSSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEEESTTSCEEEE
T ss_pred -cCCCeEEEEECCCCceeEEcccccCC-CceeEEEeCCCCCEEEEEe--CCCeEEEEEcCCCcCchhhhhccCCCCceEE
Confidence 34588999999999998887643211 12223332 33 677777 489999999998854 555554 22333344
Q ss_pred EEeCCEEEEEeCceeEeecCCccC
Q 040693 348 SVSNGCIYMGNGYKVTVGFGNKNF 371 (382)
Q Consensus 348 ~~~~g~lyv~~~~g~~~~~~~~~~ 371 (382)
...+++++++.+....+.+|.+..
T Consensus 342 ~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 342 YFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEETTEEEEEETTTEEEEEEEECC
T ss_pred EeCCCCEEEEecCCccEEEEeccC
Confidence 556777777766556677777654
No 79
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.67 E-value=6.2e-06 Score=79.01 Aligned_cols=256 Identities=11% Similarity=0.014 Sum_probs=143.3
Q ss_pred cCCCCceeeeeecC-cCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCC
Q 040693 3 KRSNGKLVWKTKLD-DHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKL 81 (382)
Q Consensus 3 d~~tGk~~W~~~~~-~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~ 81 (382)
|.++|+........ ......+..+| .+..++++.. +|.|..+|..+++.+.+......
T Consensus 119 ~~~~~~~~~~~~~~~~~~v~~v~~s~--~~~~l~~~~~--------------dg~i~iwd~~~~~~~~~~~~~~~----- 177 (401)
T 4aez_A 119 NADSGSVSALAETDESTYVASVKWSH--DGSFLSVGLG--------------NGLVDIYDVESQTKLRTMAGHQA----- 177 (401)
T ss_dssp ETTTCCEEEEEECCTTCCEEEEEECT--TSSEEEEEET--------------TSCEEEEETTTCCEEEEECCCSS-----
T ss_pred eCCCCcEeEeeecCCCCCEEEEEECC--CCCEEEEECC--------------CCeEEEEECcCCeEEEEecCCCC-----
Confidence 55666665555542 11122233333 2345555554 88999999999998887653111
Q ss_pred CCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCC-CcEEEEEe
Q 040693 82 NEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDT-GKIVWYKQ 160 (382)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~t-G~~~W~~~ 160 (382)
.+ ..... +...++.+..+ +.|..+|..+ ++.+....
T Consensus 178 ------~v--~~~~~--~~~~l~~~~~d---------------------------------g~i~i~d~~~~~~~~~~~~ 214 (401)
T 4aez_A 178 ------RV--GCLSW--NRHVLSSGSRS---------------------------------GAIHHHDVRIANHQIGTLQ 214 (401)
T ss_dssp ------CE--EEEEE--ETTEEEEEETT---------------------------------SEEEEEETTSSSCEEEEEE
T ss_pred ------ce--EEEEE--CCCEEEEEcCC---------------------------------CCEEEEecccCcceeeEEc
Confidence 01 11233 33466665543 8999999884 55555544
Q ss_pred cCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCC
Q 040693 161 LGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGG 240 (382)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g 240 (382)
.....+ .-.....+ +..+++++.++.+..+|..+++.+........
T Consensus 215 ~~~~~v---------------------------~~~~~~~~---~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~---- 260 (401)
T 4aez_A 215 GHSSEV---------------------------CGLAWRSD---GLQLASGGNDNVVQIWDARSSIPKFTKTNHNA---- 260 (401)
T ss_dssp CCSSCE---------------------------EEEEECTT---SSEEEEEETTSCEEEEETTCSSEEEEECCCSS----
T ss_pred CCCCCe---------------------------eEEEEcCC---CCEEEEEeCCCeEEEccCCCCCccEEecCCcc----
Confidence 332211 11112222 46788888999999999999999888763221
Q ss_pred Ccccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEee
Q 040693 241 GAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGS 316 (382)
Q Consensus 241 ~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~ 316 (382)
....... ++..+++.... ..++.|..+|..+++.+........ ...+.. ++..+++++
T Consensus 261 -~v~~~~~~p~~~~ll~~~~g--------------s~d~~i~i~d~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 261 -AVKAVAWCPWQSNLLATGGG--------------TMDKQIHFWNAATGARVNTVDAGSQ---VTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp -CCCEEEECTTSTTEEEEECC--------------TTTCEEEEEETTTCCEEEEEECSSC---EEEEEECSSSSEEEEEE
T ss_pred -eEEEEEECCCCCCEEEEecC--------------CCCCEEEEEECCCCCEEEEEeCCCc---EEEEEECCCCCeEEEEe
Confidence 2222222 34455554321 2468899999999999988875431 222223 345666643
Q ss_pred ecCCCcEEEEeCCCCcEeEEEecC--CceecceEE-eCCE-EEEEeCceeEeecCCccCCCCCeE
Q 040693 317 TYRQGPIYAMDVKTGKILWSYDTG--ATIYGGASV-SNGC-IYMGNGYKVTVGFGNKNFTSGTSL 377 (382)
Q Consensus 317 ~~~~g~l~~ld~~tG~ilw~~~~~--~~~~~~p~~-~~g~-lyv~~~~g~~~~~~~~~~~~g~~l 377 (382)
...++.|..+|..+++..-..... ......... .+++ |+.++.+|. +.+|.+.. ++.+
T Consensus 323 g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~-i~iw~~~~--~~~~ 384 (401)
T 4aez_A 323 GFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDEN-LKFWRVYD--GDHV 384 (401)
T ss_dssp CTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSE-EEEEECCC------
T ss_pred ecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCc-EEEEECCC--Cccc
Confidence 224899999999987766554432 222222233 2454 444555544 56666543 5544
No 80
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.67 E-value=1.1e-05 Score=74.27 Aligned_cols=225 Identities=8% Similarity=-0.014 Sum_probs=133.9
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.++++.+-+....... + ....+.+++..++.+..+
T Consensus 34 dg~v~lWd~~~~~~~~~~~~~~~~-----------v--~~~~~~~~~~~l~s~s~d------------------------ 76 (304)
T 2ynn_A 34 SGRVELWNYETQVEVRSIQVTETP-----------V--RAGKFIARKNWIIVGSDD------------------------ 76 (304)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSC-----------E--EEEEEEGGGTEEEEEETT------------------------
T ss_pred CCcEEEEECCCCceeEEeeccCCc-----------E--EEEEEeCCCCEEEEECCC------------------------
Confidence 899999999999988776642111 0 123455566677766543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+|+.+..+......+.. ..+.++ +..++++..
T Consensus 77 ---------~~i~vwd~~~~~~~~~~~~h~~~v~~---------------------------~~~~~~---~~~l~sgs~ 117 (304)
T 2ynn_A 77 ---------FRIRVFNYNTGEKVVDFEAHPDYIRS---------------------------IAVHPT---KPYVLSGSD 117 (304)
T ss_dssp ---------SEEEEEETTTCCEEEEEECCSSCEEE---------------------------EEECSS---SSEEEEEET
T ss_pred ---------CEEEEEECCCCcEEEEEeCCCCcEEE---------------------------EEEcCC---CCEEEEECC
Confidence 89999999999999887654332110 111112 467888899
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee---eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT---DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL 290 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~ 290 (382)
|+.+..+|..++..+-..-.+- ......... ++..+..+ ..++.|..+|..+++..
T Consensus 118 D~~v~lWd~~~~~~~~~~~~~h----~~~v~~v~~~p~~~~~l~sg-----------------s~D~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 118 DLTVKLWNWENNWALEQTFEGH----EHFVMCVAFNPKDPSTFASG-----------------CLDRTVKVWSLGQSTPN 176 (304)
T ss_dssp TSCEEEEEGGGTTEEEEEECCC----CSCEEEEEECTTCTTEEEEE-----------------ETTSEEEEEETTCSSCS
T ss_pred CCeEEEEECCCCcchhhhhccc----CCcEEEEEECCCCCCEEEEE-----------------eCCCeEEEEECCCCCcc
Confidence 9999999998875443221110 111222222 22344444 34588999999988877
Q ss_pred eeecCCCCCCCCcceEE----eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEeCceeEee
Q 040693 291 WSTADPSNGTAPGPVTV----ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGNGYKVTVG 365 (382)
Q Consensus 291 W~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~~g~~~~ 365 (382)
.+....... ....+.+ ++.+++.++ .++.|...|..+++.+..++........... .++.++++.+....+.
T Consensus 177 ~~~~~~~~~-~v~~~~~~~~~~~~~l~s~s--~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~ 253 (304)
T 2ynn_A 177 FTLTTGQER-GVNYVDYYPLPDKPYMITAS--DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLK 253 (304)
T ss_dssp EEEECCCTT-CEEEEEECCSTTCCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred ceeccCCcC-cEEEEEEEEcCCCCEEEEEc--CCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEE
Confidence 666543211 1111111 234666666 4999999999999998887654333333333 3444444444334456
Q ss_pred cCCccCCCCCeEEEE
Q 040693 366 FGNKNFTSGTSLYAF 380 (382)
Q Consensus 366 ~~~~~~~~g~~l~~~ 380 (382)
+|.+ .+++.+..+
T Consensus 254 iWd~--~~~~~~~~~ 266 (304)
T 2ynn_A 254 IWNS--STYKVEKTL 266 (304)
T ss_dssp EEET--TTCCEEEEE
T ss_pred EEEC--CCCceeeec
Confidence 6654 456666544
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.67 E-value=7.7e-06 Score=78.34 Aligned_cols=189 Identities=12% Similarity=0.081 Sum_probs=122.9
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|+.+|.++|+........... .+ ....+.+++..++++..+
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~~~----------~v--~~v~~s~~~~~l~~~~~d------------------------ 155 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDEST----------YV--ASVKWSHDGSFLSVGLGN------------------------ 155 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTC----------CE--EEEEECTTSSEEEEEETT------------------------
T ss_pred CCeEEEeeCCCCcEeEeeecCCCC----------CE--EEEEECCCCCEEEEECCC------------------------
Confidence 889999999999998877652111 01 235566676777777654
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+++.+.++...... +..+.. .+..+++++.
T Consensus 156 ---------g~i~iwd~~~~~~~~~~~~~~~~-----------------------------v~~~~~---~~~~l~~~~~ 194 (401)
T 4aez_A 156 ---------GLVDIYDVESQTKLRTMAGHQAR-----------------------------VGCLSW---NRHVLSSGSR 194 (401)
T ss_dssp ---------SCEEEEETTTCCEEEEECCCSSC-----------------------------EEEEEE---ETTEEEEEET
T ss_pred ---------CeEEEEECcCCeEEEEecCCCCc-----------------------------eEEEEE---CCCEEEEEcC
Confidence 88999999999998877633221 111111 1468889999
Q ss_pred CcEEEEEeCCC-CCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE
Q 040693 214 SGFAWALDRDS-GSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL 290 (382)
Q Consensus 214 ~g~l~ald~~t-G~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~ 290 (382)
++.+..+|..+ ++....+.... ........ ++..++++ ..++.|..+|.++++.+
T Consensus 195 dg~i~i~d~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~-----------------~~d~~v~iwd~~~~~~~ 252 (401)
T 4aez_A 195 SGAIHHHDVRIANHQIGTLQGHS-----SEVCGLAWRSDGLQLASG-----------------GNDNVVQIWDARSSIPK 252 (401)
T ss_dssp TSEEEEEETTSSSCEEEEEECCS-----SCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTCSSEE
T ss_pred CCCEEEEecccCcceeeEEcCCC-----CCeeEEEEcCCCCEEEEE-----------------eCCCeEEEccCCCCCcc
Confidence 99999999984 44455444221 12222222 45556555 34588999999999999
Q ss_pred eeecCCCCCCCCcceEEe--CCEEEE-eeecCCCcEEEEeCCCCcEeEEEecCCce
Q 040693 291 WSTADPSNGTAPGPVTVA--NGVLFG-GSTYRQGPIYAMDVKTGKILWSYDTGATI 343 (382)
Q Consensus 291 W~~~~~~~~~~~~~~~~~--~~~v~~-~~~~~~g~l~~ld~~tG~ilw~~~~~~~~ 343 (382)
.+....... ...+... +..+++ ++...++.|..+|..+++.+..++....+
T Consensus 253 ~~~~~~~~~--v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v 306 (401)
T 4aez_A 253 FTKTNHNAA--VKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQV 306 (401)
T ss_dssp EEECCCSSC--CCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCE
T ss_pred EEecCCcce--EEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 887654321 2233332 333444 32114899999999999999998765543
No 82
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.66 E-value=1e-05 Score=73.86 Aligned_cols=149 Identities=11% Similarity=-0.015 Sum_probs=86.3
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee---eCCeEEEEecCccccccccCCCCCCCCCceEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT---DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVA 281 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a 281 (382)
+..++.+..|+.+..+|..+|+.............+ ....... ....+.+... ...+.|..
T Consensus 162 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~---------------~~~~~i~l 225 (318)
T 4ggc_A 162 GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG-AVKAVAWCPWQSNVLATGGG---------------TSDRHIRI 225 (318)
T ss_dssp SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCS-CEEEEEECTTSTTEEEEEEC---------------TTTCEEEE
T ss_pred CCEEEEEecCcceeEEECCCCcccccceeeecccCC-ceEEEEecCCCCcEEEEEec---------------CCCCEEEE
Confidence 467888889999999999998765443321110111 1111111 2333333322 34577889
Q ss_pred EECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEeCc
Q 040693 282 MDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGNGY 360 (382)
Q Consensus 282 ~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~~ 360 (382)
+|.++++.......... .........++.+++++...++.|+.+|..+++.+.+++-......+..+ .+++++++.+.
T Consensus 226 wd~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~ 304 (318)
T 4ggc_A 226 WNVCSGACLSAVDAHSQ-VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAA 304 (318)
T ss_dssp EETTTCCEEEEEECSSC-EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred Eecccccccccccceee-eeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEec
Confidence 99999988777665432 11111112345666655335899999999999999988643333333343 35555555444
Q ss_pred eeEeecCCcc
Q 040693 361 KVTVGFGNKN 370 (382)
Q Consensus 361 g~~~~~~~~~ 370 (382)
...+.+|.+.
T Consensus 305 D~~v~iWd~~ 314 (318)
T 4ggc_A 305 DETLRLWRCF 314 (318)
T ss_dssp TTEEEEECCS
T ss_pred CCeEEEEECC
Confidence 4556677654
No 83
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.66 E-value=1.2e-05 Score=76.89 Aligned_cols=221 Identities=12% Similarity=0.115 Sum_probs=121.2
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.++++.+-...-.. ..+ .+..+.+++..++.+..+
T Consensus 144 d~~i~iwd~~~~~~~~~~~~h~-----------~~v--~~~~~~p~~~~l~s~s~d------------------------ 186 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQGHE-----------QDI--YSLDYFPSGDKLVSGSGD------------------------ 186 (393)
T ss_dssp TSCEEEEETTTTEEEEEECCCS-----------SCE--EEEEECTTSSEEEEEETT------------------------
T ss_pred CCeEEEEECCCCcEEEEEccCC-----------CCE--EEEEEcCCCCEEEEecCC------------------------
Confidence 8899999999998876543211 011 134556666677666543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+|+.......... .......... +..++++..
T Consensus 187 ---------~~v~iwd~~~~~~~~~~~~~~~----------------------------v~~~~~~~~~--~~~l~~~s~ 227 (393)
T 1erj_A 187 ---------RTVRIWDLRTGQCSLTLSIEDG----------------------------VTTVAVSPGD--GKYIAAGSL 227 (393)
T ss_dssp ---------SEEEEEETTTTEEEEEEECSSC----------------------------EEEEEECSTT--CCEEEEEET
T ss_pred ---------CcEEEEECCCCeeEEEEEcCCC----------------------------cEEEEEECCC--CCEEEEEcC
Confidence 8999999999998877754322 1111111111 467888889
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCC--Ccccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcE
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGG--GAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNV 289 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g--~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~ 289 (382)
|+.+..+|..+|+.+-..........+ ........ ++..++.+ ..++.|..+|+++++.
T Consensus 228 d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-----------------s~d~~v~~wd~~~~~~ 290 (393)
T 1erj_A 228 DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG-----------------SLDRSVKLWNLQNANN 290 (393)
T ss_dssp TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE-----------------ETTSEEEEEEC-----
T ss_pred CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE-----------------eCCCEEEEEECCCCCC
Confidence 999999999999987766432211111 12222222 44555554 3457899999887654
Q ss_pred EeeecCCCC----------CCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEe-------
Q 040693 290 LWSTADPSN----------GTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVS------- 350 (382)
Q Consensus 290 ~W~~~~~~~----------~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~------- 350 (382)
......+.. ......+.. ++.+++.++ .++.|+..|.++|+.+..+........+..+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs--~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p 368 (393)
T 1erj_A 291 KSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS--KDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGP 368 (393)
T ss_dssp ----------CEEEEEECCSSCEEEEEECGGGCEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCT
T ss_pred cccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe--CCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCC
Confidence 322111100 000111222 234566666 48999999999999988776443322233332
Q ss_pred CCEEEEEeCceeEeecCCc
Q 040693 351 NGCIYMGNGYKVTVGFGNK 369 (382)
Q Consensus 351 ~g~lyv~~~~g~~~~~~~~ 369 (382)
++.++++.+....+.+|.+
T Consensus 369 ~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 369 EYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp TCEEEEEEETTSEEEEEEE
T ss_pred CCCEEEEECCCCcEEECcc
Confidence 3566665544344555554
No 84
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.64 E-value=6.8e-06 Score=79.30 Aligned_cols=216 Identities=11% Similarity=0.041 Sum_probs=127.1
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|..+++.+-+..-. ...+ .+..+.+++..++.+..
T Consensus 171 D~~i~iwd~~~~~~~~~~~~h-----------~~~V--~~v~~~p~~~~l~s~s~------------------------- 212 (410)
T 1vyh_C 171 DMTIKLWDFQGFECIRTMHGH-----------DHNV--SSVSIMPNGDHIVSASR------------------------- 212 (410)
T ss_dssp TSCCCEEETTSSCEEECCCCC-----------SSCE--EEEEECSSSSEEEEEET-------------------------
T ss_pred CCeEEEEeCCCCceeEEEcCC-----------CCCE--EEEEEeCCCCEEEEEeC-------------------------
Confidence 888999999888876554321 0111 23456666666666554
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
++.|..+|..+|+.+-.+......+ .......+ +..+++++.
T Consensus 213 --------D~~i~~wd~~~~~~~~~~~~h~~~v---------------------------~~~~~~~~---g~~l~s~s~ 254 (410)
T 1vyh_C 213 --------DKTIKMWEVQTGYCVKTFTGHREWV---------------------------RMVRPNQD---GTLIASCSN 254 (410)
T ss_dssp --------TSEEEEEETTTCCEEEEEECCSSCE---------------------------EEEEECTT---SSEEEEEET
T ss_pred --------CCeEEEEECCCCcEEEEEeCCCccE---------------------------EEEEECCC---CCEEEEEcC
Confidence 3899999999999887665432211 11111112 467888889
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccce------------------eeeCCeEEEEecCccccccccCCCCCCCC
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGA------------------ATDERRIYTNIANSQHKNFNLKPSKNSTI 275 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 275 (382)
|+.+..+|..+++..-.+...... .....+.+ ...+..++.+ ..
T Consensus 255 D~~v~vwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg-----------------s~ 316 (410)
T 1vyh_C 255 DQTVRVWVVATKECKAELREHRHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSG-----------------SR 316 (410)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSC-EEEEEECCSCGGGGGGGCCSCC-------CCEEEEE-----------------ET
T ss_pred CCeEEEEECCCCceeeEecCCCce-EEEEEEcCcccccchhhhccccccccCCCCCEEEEE-----------------eC
Confidence 999999999998876554321100 00000000 0013344444 34
Q ss_pred CceEEEEECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEe-CC
Q 040693 276 AGGWVAMDASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVS-NG 352 (382)
Q Consensus 276 ~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~-~g 352 (382)
++.|..+|.++|+.+.+...... ....+.+ ++.+++.++ .++.|...|.++++.+..+........+..+. ++
T Consensus 317 D~~i~iwd~~~~~~~~~~~~h~~--~v~~v~~~~~g~~l~s~s--~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~ 392 (410)
T 1vyh_C 317 DKTIKMWDVSTGMCLMTLVGHDN--WVRGVLFHSGGKFILSCA--DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392 (410)
T ss_dssp TSEEEEEETTTTEEEEEEECCSS--CEEEEEECSSSSCEEEEE--TTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSS
T ss_pred CCeEEEEECCCCceEEEEECCCC--cEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCC
Confidence 58899999999998887764432 1122333 234666666 48999999999999888776544434444442 34
Q ss_pred E-EEEEeCceeEeecCC
Q 040693 353 C-IYMGNGYKVTVGFGN 368 (382)
Q Consensus 353 ~-lyv~~~~g~~~~~~~ 368 (382)
. |..++.+|. +.+|.
T Consensus 393 ~~l~sgs~D~~-i~vW~ 408 (410)
T 1vyh_C 393 PYVVTGSVDQT-VKVWE 408 (410)
T ss_dssp SCEEEEETTSE-EEEEC
T ss_pred CEEEEEeCCCc-EEEEe
Confidence 4 444444544 45554
No 85
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.62 E-value=6.1e-07 Score=85.08 Aligned_cols=223 Identities=9% Similarity=0.028 Sum_probs=123.3
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|..+|+.+-......... ...+ ....+.+++..++.+..+
T Consensus 114 dg~v~lWd~~~~~~~~~~~~~~~~h-------~~~V--~~v~~spdg~~l~sgs~d------------------------ 160 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKFAKYEH-------DDIV--KTLSVFSDGTQAVSGGKD------------------------ 160 (357)
T ss_dssp TSCEEEC--------CCCCEEECCC-------SSCE--EEEEECSSSSEEEEEETT------------------------
T ss_pred CCEEEEeeccccceeEEEeeccCCC-------CCCE--EEEEECCCCCEEEEEeCC------------------------
Confidence 7778888887777654433211100 0111 134566666666665543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+++.+..++.....+. -..+..++ ...++.+..
T Consensus 161 ---------g~v~iwd~~~~~~~~~~~~h~~~v~---------------------------~v~~s~~~--~~~~~s~~~ 202 (357)
T 4g56_B 161 ---------FSVKVWDLSQKAVLKSYNAHSSEVN---------------------------CVAACPGK--DTIFLSCGE 202 (357)
T ss_dssp ---------SCEEEEETTTTEEEEEECCCSSCEE---------------------------EEEECTTC--SSCEEEEET
T ss_pred ---------CeEEEEECCCCcEEEEEcCCCCCEE---------------------------EEEEccCC--Cceeeeecc
Confidence 8899999999999988865433211 01111222 456777888
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
|+.+..+|..+++..-....... ......... +++.+++.. ..++.|..+|+++++.+.
T Consensus 203 dg~v~~wd~~~~~~~~~~~~~~~---~~~v~~v~~sp~~~~~la~g----------------~~d~~i~~wd~~~~~~~~ 263 (357)
T 4g56_B 203 DGRILLWDTRKPKPATRIDFCAS---DTIPTSVTWHPEKDDTFACG----------------DETGNVSLVNIKNPDSAQ 263 (357)
T ss_dssp TSCEEECCTTSSSCBCBCCCTTC---CSCEEEEEECTTSTTEEEEE----------------ESSSCEEEEESSCGGGCE
T ss_pred CCceEEEECCCCceeeeeeeccc---cccccchhhhhcccceEEEe----------------ecccceeEEECCCCcEeE
Confidence 99999999999987766553321 111122222 334444331 345789999999999887
Q ss_pred eecCCCCCCCCcceEE--eCC-EEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeCceeEeec
Q 040693 292 STADPSNGTAPGPVTV--ANG-VLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNGYKVTVGF 366 (382)
Q Consensus 292 ~~~~~~~~~~~~~~~~--~~~-~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~g~~~~~ 366 (382)
+....... ...+.+ +++ ++..++ .++.|..+|.++++++........ ..+.+. .+++++++.+....+.+
T Consensus 264 ~~~~~~~~--v~~l~~sp~~~~~lasgs--~D~~i~iwd~~~~~~~~~~~H~~~-V~~vafsP~d~~~l~s~s~Dg~v~i 338 (357)
T 4g56_B 264 TSAVHSQN--ITGLAYSYHSSPFLASIS--EDCTVAVLDADFSEVFRDLSHRDF-VTGVAWSPLDHSKFTTVGWDHKVLH 338 (357)
T ss_dssp EECCCSSC--EEEEEECSSSSCCEEEEE--TTSCEEEECTTSCEEEEECCCSSC-EEEEEECSSSTTEEEEEETTSCEEE
T ss_pred EEecccee--EEEEEEcCCCCCEEEEEe--CCCEEEEEECCCCcEeEECCCCCC-EEEEEEeCCCCCEEEEEcCCCeEEE
Confidence 77654321 122333 233 444455 489999999999998876533222 233333 35666665444344667
Q ss_pred CCccC
Q 040693 367 GNKNF 371 (382)
Q Consensus 367 ~~~~~ 371 (382)
|.+..
T Consensus 339 W~~~~ 343 (357)
T 4g56_B 339 HHLPS 343 (357)
T ss_dssp EECC-
T ss_pred EECCC
Confidence 76643
No 86
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.62 E-value=2.5e-05 Score=74.20 Aligned_cols=278 Identities=14% Similarity=0.089 Sum_probs=146.5
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKL 81 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~ 81 (382)
+|.+||+++=+.+.+..+ .+..+| .+..+|++......... -..++.|..||.++++++-+..+.+....
T Consensus 36 ~D~~t~~~~~~i~~g~~p--~i~~sp--dg~~lyv~~~~~~~~~~----g~~~~~v~v~d~~t~~~~~~i~~~~~~~~-- 105 (361)
T 2oiz_A 36 YDYTNGKFLGMVPTAFNG--HVQVSN--DGKKIYTMTTYHERITR----GKRSDVVEVWDADKLTFEKEISLPPKRVQ-- 105 (361)
T ss_dssp EETTTCCEEEEEECCEEE--EEEECT--TSSEEEEEEEEETTSSS----SCEEEEEEEEETTTCCEEEEEEECTTBCC--
T ss_pred EECCCCeEEEEecCCCCC--ceEECC--CCCEEEEEEeccccccc----CCCCCEEEEEECcCCcEEEEEEcCccccc--
Confidence 577788876544432211 111111 24678887521000000 00156799999999999988876422110
Q ss_pred CCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEE-Ee
Q 040693 82 NEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWY-KQ 160 (382)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~-~~ 160 (382)
.|... ....+++++.++|++... ..+.|..+|.++++++-+ .+
T Consensus 106 ---~g~~p--~~i~~spdg~~l~v~n~~-------------------------------~~~~v~v~d~~~~~~~~~~i~ 149 (361)
T 2oiz_A 106 ---GLNYD--GLFRQTTDGKFIVLQNAS-------------------------------PATSIGIVDVAKGDYVEDVTA 149 (361)
T ss_dssp ---BCCCG--GGEEECTTSSEEEEEEES-------------------------------SSEEEEEEETTTTEEEEEEGG
T ss_pred ---cCCCc--ceEEECCCCCEEEEECCC-------------------------------CCCeEEEEECCCCcEEEEEec
Confidence 01111 246788888999997532 127899999999998765 44
Q ss_pred cCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCC-CCeeeeeccCCCC-C
Q 040693 161 LGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDS-GSLIWSMEAGPGG-L 238 (382)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~t-G~~~W~~~~~~~~-~ 238 (382)
.... + ++. ...++ ...++....+|.+..++.++ |+..+........ .
T Consensus 150 ~~~~--~-------------------------~v~--~~p~~--~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~ 198 (361)
T 2oiz_A 150 AAGC--W-------------------------SVI--PQPNR--PRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSV 198 (361)
T ss_dssp GTTE--E-------------------------EEE--ECTTS--SSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCT
T ss_pred CCCc--c-------------------------eeE--EcCCC--CeeEEEECCCCcEEEEEECCCCcEeeeccccceEcC
Confidence 3221 0 000 01111 12344555566666666543 6666433210000 0
Q ss_pred CCCccc-ceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE----eeecC------CCCCCCCcceEE
Q 040693 239 GGGAMW-GAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL----WSTAD------PSNGTAPGPVTV 307 (382)
Q Consensus 239 ~g~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~----W~~~~------~~~~~~~~~~~~ 307 (382)
.....+ ...-++..+++. ...+.++.+|..+++.. |.... ...+.....+.+
T Consensus 199 ~~~~~~~~~~~~g~~~~~~-----------------~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~ 261 (361)
T 2oiz_A 199 KDDPIFIAPALDKDKAHFV-----------------SYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGL 261 (361)
T ss_dssp TTSCBCSCCEECSSEEEEE-----------------BTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEE
T ss_pred CCCceEEEecccCCEEEEE-----------------eCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEE
Confidence 001111 111234444444 23467999998776532 33211 000000111333
Q ss_pred --eCCEEEEeee-c--------CCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeCceeEeecCCccCCCC
Q 040693 308 --ANGVLFGGST-Y--------RQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNGYKVTVGFGNKNFTSG 374 (382)
Q Consensus 308 --~~~~v~~~~~-~--------~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~g~~~~~~~~~~~~g 374 (382)
+++++|+... . ..+.|..+|.++++++-+++.+. -.+..+ .+.+||+++. +. + .-+|..+|
T Consensus 262 ~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~-v--~v~D~~t~ 335 (361)
T 2oiz_A 262 HRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GN-V--NVYDISQP 335 (361)
T ss_dssp ETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SC-E--EEEECSSS
T ss_pred ecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-Ce-E--EEEECCCC
Confidence 3578998752 0 13479999999999999998876 333333 4567888775 33 3 33588888
Q ss_pred --CeEEE
Q 040693 375 --TSLYA 379 (382)
Q Consensus 375 --~~l~~ 379 (382)
+.+-.
T Consensus 336 ~l~~~~~ 342 (361)
T 2oiz_A 336 EPKLLRT 342 (361)
T ss_dssp SCEEEEE
T ss_pred cceeeEE
Confidence 76643
No 87
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.61 E-value=5.4e-06 Score=78.58 Aligned_cols=111 Identities=11% Similarity=0.072 Sum_probs=75.2
Q ss_pred EEEEEccCcEEEEEeCCCCCeeeeeccCCCC-CCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCC---ceEE
Q 040693 207 IVVAVQKSGFAWALDRDSGSLIWSMEAGPGG-LGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIA---GGWV 280 (382)
Q Consensus 207 ~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~-~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~---g~v~ 280 (382)
.++++..++.+..+|..+++.+..+.....- ........... ++..++++ ..+ +.|.
T Consensus 199 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~-----------------~~d~~~g~i~ 261 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA-----------------HDSNSFGCIT 261 (397)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEE-----------------EEETTEEEEE
T ss_pred eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEE-----------------ecCCCCceEE
Confidence 7888899999999999999999888751000 00112222222 45555554 334 7899
Q ss_pred EEECCCCcEEeeecC-------------CCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEe
Q 040693 281 AMDASNGNVLWSTAD-------------PSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYD 338 (382)
Q Consensus 281 a~d~~tG~~~W~~~~-------------~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~ 338 (382)
.+|.++++.+.+... ... ....+.+ ++.+++.++ .++.|..+|..+++.+.++.
T Consensus 262 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 262 LYETEFGERIGSLSVPTHSSQASLGEFAHSS--WVMSLSFNDSGETLCSAG--WDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEETTTCCEEEEECBC--------CCBSBSS--CEEEEEECSSSSEEEEEE--TTSEEEEEETTTTEEEEEEE
T ss_pred EEECCCCcccceeccCcccccccccccccCC--cEEEEEECCCCCEEEEEe--CCCeEEEEEcCCCceeEEEe
Confidence 999999999988775 221 1122223 245666666 48999999999999999988
No 88
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.59 E-value=1.5e-05 Score=76.86 Aligned_cols=148 Identities=11% Similarity=-0.014 Sum_probs=88.1
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee---eCCeEEEEecCccccccccCCCCCCCCCceEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT---DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVA 281 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a 281 (382)
+..+..+..|+.+..+|..+++..+.......... ........ ....+.+... ..++.|..
T Consensus 242 g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~-~~V~~~~~~p~~~~~la~~~g---------------s~D~~I~i 305 (420)
T 4gga_A 242 GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ-GAVKAVAWCPWQSNVLATGGG---------------TSDRHIRI 305 (420)
T ss_dssp SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCS-SCEEEEEECTTCTTEEEEEEC---------------TTTCEEEE
T ss_pred CCeeeeeeccccceEEeeccccccceeeeeecccC-CceeeeeeCCCcccEEEEEee---------------cCCCEEEE
Confidence 46778888899999999998875433211100000 11111111 2333333322 34588999
Q ss_pred EECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEe
Q 040693 282 MDASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGN 358 (382)
Q Consensus 282 ~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~ 358 (382)
+|..+|+.......... ...+.. .++.+++++...++.|+.+|..+++.+.++.-......+..+ .+++++++.
T Consensus 306 wd~~t~~~~~~~~~~~~---v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~ 382 (420)
T 4gga_A 306 WNVCSGACLSAVDAHSQ---VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASA 382 (420)
T ss_dssp EETTTTEEEEEEECSSC---EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred EeCCccccceeeccccc---eeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 99999999988876542 122222 345666665335799999999999999988643333333333 356656655
Q ss_pred CceeEeecCCccC
Q 040693 359 GYKVTVGFGNKNF 371 (382)
Q Consensus 359 ~~g~~~~~~~~~~ 371 (382)
+....+.+|.+..
T Consensus 383 s~D~tvriWdv~~ 395 (420)
T 4gga_A 383 AADETLRLWRCFE 395 (420)
T ss_dssp ETTTEEEEECCSC
T ss_pred ecCCeEEEEECCC
Confidence 5445577887653
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.59 E-value=1.3e-05 Score=83.74 Aligned_cols=223 Identities=9% Similarity=-0.002 Sum_probs=139.4
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
+|.|..+|..+|+.+.+....... + ....+.+++..++++..+
T Consensus 34 ~g~v~iwd~~~~~~~~~~~~~~~~-----------v--~~~~~s~~~~~l~~~~~d------------------------ 76 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQVTETP-----------V--RAGKFIARKNWIIVGSDD------------------------ 76 (814)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSC-----------E--EEEEEEGGGTEEEEEETT------------------------
T ss_pred CCEEEEEECCCCceEEEEecCCCc-----------E--EEEEEeCCCCEEEEEeCC------------------------
Confidence 889999999999998887642111 1 235677777777776654
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+|+.+.+.......+. -.....+ +..|++++.
T Consensus 77 ---------g~i~vw~~~~~~~~~~~~~~~~~v~---------------------------~~~~s~~---~~~l~~~~~ 117 (814)
T 3mkq_A 77 ---------FRIRVFNYNTGEKVVDFEAHPDYIR---------------------------SIAVHPT---KPYVLSGSD 117 (814)
T ss_dssp ---------SEEEEEETTTCCEEEEEECCSSCEE---------------------------EEEECSS---SSEEEEEET
T ss_pred ---------CeEEEEECCCCcEEEEEecCCCCEE---------------------------EEEEeCC---CCEEEEEcC
Confidence 8999999999999988865433211 1112222 356778888
Q ss_pred CcEEEEEeCCCCCee-eeeccCCCCCCCCcccceee---eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcE
Q 040693 214 SGFAWALDRDSGSLI-WSMEAGPGGLGGGAMWGAAT---DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNV 289 (382)
Q Consensus 214 ~g~l~ald~~tG~~~-W~~~~~~~~~~g~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~ 289 (382)
++.+..+|..++... -...... ........ ++..++++ ..++.|..+|..+++.
T Consensus 118 dg~i~vw~~~~~~~~~~~~~~~~-----~~v~~~~~~p~~~~~l~~~-----------------~~dg~v~vwd~~~~~~ 175 (814)
T 3mkq_A 118 DLTVKLWNWENNWALEQTFEGHE-----HFVMCVAFNPKDPSTFASG-----------------CLDRTVKVWSLGQSTP 175 (814)
T ss_dssp TSEEEEEEGGGTSEEEEEEECCS-----SCEEEEEEETTEEEEEEEE-----------------ETTSEEEEEETTCSSC
T ss_pred CCEEEEEECCCCceEEEEEcCCC-----CcEEEEEEEcCCCCEEEEE-----------------eCCCeEEEEECCCCcc
Confidence 999999999887333 2222111 12222222 23345444 3458899999999998
Q ss_pred EeeecCCCCCCCCcceEE----eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCC-EEEEEeCceeE
Q 040693 290 LWSTADPSNGTAPGPVTV----ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNG-CIYMGNGYKVT 363 (382)
Q Consensus 290 ~W~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g-~lyv~~~~g~~ 363 (382)
.......... ....+.. ++..++.++ .++.|..+|..+++.+..+............ .++ .|++++.+|.
T Consensus 176 ~~~~~~~~~~-~v~~~~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~- 251 (814)
T 3mkq_A 176 NFTLTTGQER-GVNYVDYYPLPDKPYMITAS--DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT- 251 (814)
T ss_dssp SEEEECCCTT-CCCEEEECCSTTCCEEEEEC--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-
T ss_pred eeEEecCCCC-CEEEEEEEECCCCCEEEEEe--CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe-
Confidence 8887654311 1222222 345666666 4899999999999998888754433333333 234 4555555655
Q ss_pred eecCCccCCCCCeEEEE
Q 040693 364 VGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 364 ~~~~~~~~~~g~~l~~~ 380 (382)
+.+| +..+++.+..+
T Consensus 252 v~vw--d~~~~~~~~~~ 266 (814)
T 3mkq_A 252 LKIW--NSSTYKVEKTL 266 (814)
T ss_dssp EEEE--ETTTCSEEEEE
T ss_pred EEEE--ECCCCcEEEEe
Confidence 3444 45557776655
No 90
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.58 E-value=1.5e-05 Score=74.20 Aligned_cols=223 Identities=9% Similarity=-0.005 Sum_probs=126.4
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeC-CCCeEEEEcCCCCCCCcchhhcccccCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDP-IRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSP 132 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (382)
++.|..+|..+++.+.+....... + ....+.+ ++..++.+..+
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~-----------i--~~~~~~~~~~~~l~s~~~d----------------------- 137 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNA-----------I--NELKFHPRDPNLLLSVSKD----------------------- 137 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSC-----------E--EEEEECSSCTTEEEEEETT-----------------------
T ss_pred CCEEEEEEchhceEeeeecCCCCc-----------E--EEEEECCCCCCEEEEEeCC-----------------------
Confidence 899999999999998887632110 1 1345555 45566665543
Q ss_pred CCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEc
Q 040693 133 DKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQ 212 (382)
Q Consensus 133 ~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~ 212 (382)
+.|..+|..+++.+..+...... .....-.....+ +..++++.
T Consensus 138 ----------g~i~iwd~~~~~~~~~~~~~~~~------------------------~~~v~~~~~~~~---~~~l~~~~ 180 (366)
T 3k26_A 138 ----------HALRLWNIQTDTLVAIFGGVEGH------------------------RDEVLSADYDLL---GEKIMSCG 180 (366)
T ss_dssp ----------SCEEEEETTTTEEEEEECSTTSC------------------------SSCEEEEEECTT---SSEEEEEE
T ss_pred ----------CeEEEEEeecCeEEEEecccccc------------------------cCceeEEEECCC---CCEEEEec
Confidence 88999999999988877431110 011111122222 46788888
Q ss_pred cCcEEEEEeCCCCCeeeeeccC----CC-------------------CCCCCcccceeeeCCeEEEEecCccccccccCC
Q 040693 213 KSGFAWALDRDSGSLIWSMEAG----PG-------------------GLGGGAMWGAATDERRIYTNIANSQHKNFNLKP 269 (382)
Q Consensus 213 ~~g~l~ald~~tG~~~W~~~~~----~~-------------------~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 269 (382)
.++.+..+|..+++.+-.+... +. .............++.++.+
T Consensus 181 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~------------- 247 (366)
T 3k26_A 181 MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSK------------- 247 (366)
T ss_dssp TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEE-------------
T ss_pred CCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEE-------------
Confidence 8999999999988766443310 00 00111122222235555554
Q ss_pred CCCCCCCceEEEEECCCCcE--------------EeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcE
Q 040693 270 SKNSTIAGGWVAMDASNGNV--------------LWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKI 333 (382)
Q Consensus 270 ~~~~~~~g~v~a~d~~tG~~--------------~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~i 333 (382)
..++.|..+|..+++. +.+..........-....+ +.+++.++ .+|.|+.+|..+++.
T Consensus 248 ----~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~--~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 248 ----SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN--QVGKLYVWDLEVEDP 321 (366)
T ss_dssp ----CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC--TTSCEEEEECCSSSG
T ss_pred ----ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe--cCCcEEEEECCCCCC
Confidence 4468899999988854 4444333322223333334 56777776 489999999999875
Q ss_pred eE----EEecC--CceecceEE-eCCE-EEEEeCceeEeecCCc
Q 040693 334 LW----SYDTG--ATIYGGASV-SNGC-IYMGNGYKVTVGFGNK 369 (382)
Q Consensus 334 lw----~~~~~--~~~~~~p~~-~~g~-lyv~~~~g~~~~~~~~ 369 (382)
+. .+... ......... .+++ |+.++.+|. +.+|.+
T Consensus 322 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~-i~iwd~ 364 (366)
T 3k26_A 322 HKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDAS-IWRWDR 364 (366)
T ss_dssp GGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-EEEEEC
T ss_pred ccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCE-EEEEEe
Confidence 43 33332 122223333 2444 444555544 445543
No 91
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.57 E-value=2.6e-05 Score=72.96 Aligned_cols=167 Identities=13% Similarity=0.014 Sum_probs=102.1
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
++.|..+|..+|+.+-.+......+. -..+.++ +..++++..|+.+..+|
T Consensus 163 d~~i~~wd~~~~~~~~~~~~h~~~v~---------------------------~~~~~~~---~~~l~sg~~d~~v~~wd 212 (340)
T 1got_B 163 DTTCALWDIETGQQTTTFTGHTGDVM---------------------------SLSLAPD---TRLFVSGACDASAKLWD 212 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEE---------------------------EEEECTT---SSEEEEEETTSCEEEEE
T ss_pred CCcEEEEECCCCcEEEEEcCCCCceE---------------------------EEEECCC---CCEEEEEeCCCcEEEEE
Confidence 38899999999998876653322111 1112222 35788888999999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCC
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNG 299 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~ 299 (382)
..+++.+..+..-. ........ ++..++.+ ..++.|..+|.++++.+.........
T Consensus 213 ~~~~~~~~~~~~h~-----~~v~~v~~~p~~~~l~s~-----------------s~d~~v~iwd~~~~~~~~~~~~~~~~ 270 (340)
T 1got_B 213 VREGMCRQTFTGHE-----SDINAICFFPNGNAFATG-----------------SDDATCRLFDLRADQELMTYSHDNII 270 (340)
T ss_dssp TTTCSEEEEECCCS-----SCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTTTEEEEEECCTTCC
T ss_pred CCCCeeEEEEcCCc-----CCEEEEEEcCCCCEEEEE-----------------cCCCcEEEEECCCCcEEEEEccCCcc
Confidence 99998887765321 11222222 44555554 34588999999999988777643311
Q ss_pred CCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEE-EeCcee
Q 040693 300 TAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYM-GNGYKV 362 (382)
Q Consensus 300 ~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv-~~~~g~ 362 (382)
.....+.+ ++.+++.++ .++.|..+|..+++.+-.+...........+ .++++++ ++.+|.
T Consensus 271 ~~v~~~~~s~~g~~l~~g~--~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 271 CGITSVSFSKSGRLLLAGY--DDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp SCEEEEEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred cceEEEEECCCCCEEEEEC--CCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 11122223 245666666 4899999999999988777643333333333 3454444 444433
No 92
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.54 E-value=1.6e-05 Score=75.89 Aligned_cols=197 Identities=11% Similarity=-0.035 Sum_probs=112.1
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|..+++.+.++..... .+ ....+.+++..++.+..+
T Consensus 160 d~~i~iwd~~~~~~~~~~~~h~~-----------~v--~~~~~~~~~~~l~s~~~d------------------------ 202 (420)
T 3vl1_A 160 DMQLKIWSVKDGSNPRTLIGHRA-----------TV--TDIAIIDRGRNVLSASLD------------------------ 202 (420)
T ss_dssp TSEEEEEETTTCCCCEEEECCSS-----------CE--EEEEEETTTTEEEEEETT------------------------
T ss_pred CCeEEEEeCCCCcCceEEcCCCC-----------cE--EEEEEcCCCCEEEEEcCC------------------------
Confidence 88999999999998876643111 11 235667776777766543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCC-----CCCCCCCCCCCceEEEeeeCceeecEE
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPP-----GPSPDADFGEAPMMLSMYRNKVKHDIV 208 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~g~~~~~v 208 (382)
+.|..+|..+|+.+..+.......-...+..+. |.... ...+...+.-+ . .+..|
T Consensus 203 ---------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~v~~~~~s-------~---~~~~l 262 (420)
T 3vl1_A 203 ---------GTIRLWECGTGTTIHTFNRKENPHDGVNSIALF-VGTDRQLHEISTSKKNNLEFG-------T---YGKYV 262 (420)
T ss_dssp ---------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEE-ECCCSSCGGGCCCCCCTTCSS-------C---TTEEE
T ss_pred ---------CcEEEeECCCCceeEEeecCCCCCCCccEEEEe-cCCcceeeecccCcccceEEc-------C---CCCEE
Confidence 889999999999999887543210000000000 00000 00000000001 1 14577
Q ss_pred EEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCC-eEEEEecCccccccccCCCCCCCCCceEEEEECC
Q 040693 209 VAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DER-RIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS 285 (382)
Q Consensus 209 ~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~-~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~ 285 (382)
+++..++.+..+|..+++.......... ........ ++. .++.+ ..++.|..+|.+
T Consensus 263 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~l~~g-----------------~~dg~i~vwd~~ 321 (420)
T 3vl1_A 263 IAGHVSGVITVHNVFSKEQTIQLPSKFT----CSCNSLTVDGNNANYIYAG-----------------YENGMLAQWDLR 321 (420)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCTTS----SCEEEEEECSSCTTEEEEE-----------------ETTSEEEEEETT
T ss_pred EEEcCCCeEEEEECCCCceeEEcccccC----CCceeEEEeCCCCCEEEEE-----------------eCCCeEEEEEcC
Confidence 8888999999999999998888754211 12222222 344 56665 345889999999
Q ss_pred CCcE-EeeecCCCCCCCCcceEEeCC-EEEEeeecCCCcEEEEeCCCC
Q 040693 286 NGNV-LWSTADPSNGTAPGPVTVANG-VLFGGSTYRQGPIYAMDVKTG 331 (382)
Q Consensus 286 tG~~-~W~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~g~l~~ld~~tG 331 (382)
+++. +-+....... ....+...++ +++.++ .++.|...|..+.
T Consensus 322 ~~~~~~~~~~~~~~~-~v~~~~~~~~~~l~s~~--~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 322 SPECPVGEFLINEGT-PINNVYFAAGALFVSSG--FDTSIKLDIISDP 366 (420)
T ss_dssp CTTSCSEEEEESTTS-CEEEEEEETTEEEEEET--TTEEEEEEEECCT
T ss_pred CCcCchhhhhccCCC-CceEEEeCCCCEEEEec--CCccEEEEeccCC
Confidence 9854 4444432211 1222334445 444444 4888999987763
No 93
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.51 E-value=1.7e-05 Score=79.52 Aligned_cols=149 Identities=14% Similarity=0.036 Sum_probs=94.3
Q ss_pred cEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--e-CCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 206 DIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--D-ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~-~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
..++++..++.+..+|..+++.+..+..... .+........ + +..++++ ..++.|..+
T Consensus 174 ~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~-----------------~~dg~i~vw 234 (615)
T 1pgu_A 174 MRSMTVGDDGSVVFYQGPPFKFSASDRTHHK--QGSFVRDVEFSPDSGEFVITV-----------------GSDRKISCF 234 (615)
T ss_dssp CEEEEEETTTEEEEEETTTBEEEEEECSSSC--TTCCEEEEEECSTTCCEEEEE-----------------ETTCCEEEE
T ss_pred cEEEEEeCCCcEEEEeCCCcceeeeecccCC--CCceEEEEEECCCCCCEEEEE-----------------eCCCeEEEE
Confidence 3788888999999999999998887763221 0002222222 4 4556655 345889999
Q ss_pred ECCCCcEEeee-c---CCCCCCCCcceEE-eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC-----ceecceEEeCC
Q 040693 283 DASNGNVLWST-A---DPSNGTAPGPVTV-ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA-----TIYGGASVSNG 352 (382)
Q Consensus 283 d~~tG~~~W~~-~---~~~~~~~~~~~~~-~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~-----~~~~~p~~~~g 352 (382)
|.++++.+.+. . ..... ...+.+ ++..++.++ .++.|..+|..+++.+.++.... .........++
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (615)
T 1pgu_A 235 DGKSGEFLKYIEDDQEPVQGG--IFALSWLDSQKFATVG--ADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG 310 (615)
T ss_dssp ETTTCCEEEECCBTTBCCCSC--EEEEEESSSSEEEEEE--TTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETT
T ss_pred ECCCCCEeEEecccccccCCc--eEEEEEcCCCEEEEEc--CCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCC
Confidence 99999999887 3 22211 122222 456777766 48999999999999999988762 11111122667
Q ss_pred EEEEEeCceeEeecCCccCCCCCeEEEE
Q 040693 353 CIYMGNGYKVTVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 353 ~lyv~~~~g~~~~~~~~~~~~g~~l~~~ 380 (382)
.+++++.+|. +.+|. ..+++.+..+
T Consensus 311 ~l~~~~~~g~-i~~~d--~~~~~~~~~~ 335 (615)
T 1pgu_A 311 RIISLSLDGT-LNFYE--LGHDEVLKTI 335 (615)
T ss_dssp EEEEEETTSC-EEEEE--TTEEEEEEEE
T ss_pred eEEEEECCCC-EEEEE--CCCCcEEEEE
Confidence 7777777765 33443 4445555443
No 94
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.51 E-value=9.5e-05 Score=68.90 Aligned_cols=233 Identities=14% Similarity=0.108 Sum_probs=127.6
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|+.+|.++|+++-.... .....| ...++++++. +|++...
T Consensus 68 ~~~i~~~d~~~g~~~~~~~~--~~~~~p----------~gia~d~~g~-l~v~d~~------------------------ 110 (329)
T 3fvz_A 68 EDTILVIDPNNAEILQSSGK--NLFYLP----------HGLSIDTDGN-YWVTDVA------------------------ 110 (329)
T ss_dssp SCCEEEECTTTCCEEEEECT--TTCSSE----------EEEEECTTSC-EEEEETT------------------------
T ss_pred CCcEEEEECCCCeEEeccCC--CccCCc----------eEEEECCCCC-EEEEECC------------------------
Confidence 35799999999998754321 111000 1246776544 7776542
Q ss_pred CCCCCCCCcceEEEEECCCCc--EEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEE
Q 040693 134 KCIEPENHSNSLLALDLDTGK--IVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAV 211 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~ 211 (382)
.+.|+.+|+. |+ .+..+........ ..+....|.=..+..++ +.++++.
T Consensus 111 --------~~~v~~~~~~-g~~~~~~~~~~~~~~g~------------------~~~~~~~P~~ia~~~~~--g~lyv~d 161 (329)
T 3fvz_A 111 --------LHQVFKLDPH-SKEGPLLILGRSMQPGS------------------DQNHFCQPTDVAVEPST--GAVFVSD 161 (329)
T ss_dssp --------TTEEEEECTT-CSSCCSEEESBTTBCCC------------------STTCCSSEEEEEECTTT--CCEEEEE
T ss_pred --------CCEEEEEeCC-CCeEEEEEecccCCCCC------------------CccccCCCcEEEEeCCC--CeEEEEe
Confidence 2789999974 66 5555532211000 00011234333332211 3344444
Q ss_pred c-cCcEEEEEeCCCCCeeeeeccCCCCC---CC--Ccccceeee--CCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 212 Q-KSGFAWALDRDSGSLIWSMEAGPGGL---GG--GAMWGAATD--ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 212 ~-~~g~l~ald~~tG~~~W~~~~~~~~~---~g--~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
. .++.+..+| .+|+.++.+....... .+ ....+.+++ ++.+|++.. ..++|..+|
T Consensus 162 ~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~----------------~~~~I~~~~ 224 (329)
T 3fvz_A 162 GYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR----------------ENGRIQCFK 224 (329)
T ss_dssp CSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET----------------TTTEEEEEE
T ss_pred CCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC----------------CCCEEEEEE
Confidence 3 478999999 5699888775321100 00 012333443 488998742 357899999
Q ss_pred CCCCcEEeeecCCCCCCCCcceEEeCCEEEEeee------cCCCcEEEEeCCCCcEeEEEecCCceecc---eEE-eCCE
Q 040693 284 ASNGNVLWSTADPSNGTAPGPVTVANGVLFGGST------YRQGPIYAMDVKTGKILWSYDTGATIYGG---ASV-SNGC 353 (382)
Q Consensus 284 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~g~l~~ld~~tG~ilw~~~~~~~~~~~---p~~-~~g~ 353 (382)
+.+|+.+.++..+........+.+..+.+|.... .....++.+|..+|+++..+......... .++ .+|.
T Consensus 225 ~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~ 304 (329)
T 3fvz_A 225 TDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGT 304 (329)
T ss_dssp TTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSE
T ss_pred CCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCC
Confidence 9999999887644311111112222344444431 13458999999999999887533222222 233 4679
Q ss_pred EEEEeCceeEeecCCc
Q 040693 354 IYMGNGYKVTVGFGNK 369 (382)
Q Consensus 354 lyv~~~~g~~~~~~~~ 369 (382)
|||+......+..|.+
T Consensus 305 lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 305 VYIGDAHTNTVWKFTL 320 (329)
T ss_dssp EEEEESSSCCEEEEEE
T ss_pred EEEEECCCCEEEEEeC
Confidence 9999876554444443
No 95
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.50 E-value=1.7e-05 Score=74.08 Aligned_cols=221 Identities=5% Similarity=-0.062 Sum_probs=130.8
Q ss_pred cceEEEEeCccCc--eeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCC
Q 040693 54 QGSLAKLDAKTGR--ILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTS 131 (382)
Q Consensus 54 ~g~l~ald~~tG~--~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (382)
++.|+.+|.++++ .+-++..... .+ ....+.+++..++.+..+
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~~h~~-----------~v--~~~~~~~~~~~l~~~~~d---------------------- 73 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELKEHNG-----------QV--TGVDWAPDSNRIVTCGTD---------------------- 73 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEECCSS-----------CE--EEEEEETTTTEEEEEETT----------------------
T ss_pred CCEEEEEeCCCCcEEeeeeecCCCC-----------cc--cEEEEeCCCCEEEEEcCC----------------------
Confidence 8899999999997 5555542111 11 135566666677776543
Q ss_pred CCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEE
Q 040693 132 PDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAV 211 (382)
Q Consensus 132 ~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~ 211 (382)
+.|..+|..+++..-........ ....-..+..+ +..++++
T Consensus 74 -----------g~i~vwd~~~~~~~~~~~~~~~~-------------------------~~v~~~~~~~~---~~~l~~~ 114 (372)
T 1k8k_C 74 -----------RNAYVWTLKGRTWKPTLVILRIN-------------------------RAARCVRWAPN---EKKFAVG 114 (372)
T ss_dssp -----------SCEEEEEEETTEEEEEEECCCCS-------------------------SCEEEEEECTT---SSEEEEE
T ss_pred -----------CeEEEEECCCCeeeeeEEeecCC-------------------------CceeEEEECCC---CCEEEEE
Confidence 78999999888866665543321 11111222222 4678888
Q ss_pred ccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEEC-----
Q 040693 212 QKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDA----- 284 (382)
Q Consensus 212 ~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~----- 284 (382)
..++.+..+|..+++..+....-.. ........... ++..++++ ..++.|..+|.
T Consensus 115 ~~d~~v~i~d~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~-----------------~~dg~i~~~d~~~~~~ 176 (372)
T 1k8k_C 115 SGSRVISICYFEQENDWWVCKHIKK-PIRSTVLSLDWHPNSVLLAAG-----------------SCDFKCRIFSAYIKEV 176 (372)
T ss_dssp ETTSSEEEEEEETTTTEEEEEEECT-TCCSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEECCCTTT
T ss_pred eCCCEEEEEEecCCCcceeeeeeec-ccCCCeeEEEEcCCCCEEEEE-----------------cCCCCEEEEEcccccc
Confidence 8899999988888775443321110 00111222222 44555554 34578888994
Q ss_pred -------------CCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE
Q 040693 285 -------------SNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV 349 (382)
Q Consensus 285 -------------~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~ 349 (382)
.+++.+-+...... ....+.+ ++..++.++ .++.|..+|..+++.+.++............
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 252 (372)
T 1k8k_C 177 EERPAPTPWGSKMPFGELMFESSSSCG--WVHGVCFSANGSRVAWVS--HDSTVCLADADKKMAVATLASETLPLLAVTF 252 (372)
T ss_dssp SCCCCCBTTBSCCCTTCEEEECCCCSS--CEEEEEECSSSSEEEEEE--TTTEEEEEEGGGTTEEEEEECSSCCEEEEEE
T ss_pred cccccccccccccchhhheEecCCCCC--eEEEEEECCCCCEEEEEe--CCCEEEEEECCCCceeEEEccCCCCeEEEEE
Confidence 46777766653321 1122223 345777776 4899999999999999988765433333333
Q ss_pred -eCCEEEEEeCceeEeecCCccC
Q 040693 350 -SNGCIYMGNGYKVTVGFGNKNF 371 (382)
Q Consensus 350 -~~g~lyv~~~~g~~~~~~~~~~ 371 (382)
.+++++++..++. +.+|.++.
T Consensus 253 ~~~~~~l~~~~d~~-i~i~~~~~ 274 (372)
T 1k8k_C 253 ITESSLVAAGHDCF-PVLFTYDS 274 (372)
T ss_dssp EETTEEEEEETTSS-CEEEEEET
T ss_pred ecCCCEEEEEeCCe-EEEEEccC
Confidence 5777777765544 45566554
No 96
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.49 E-value=0.00023 Score=67.60 Aligned_cols=257 Identities=13% Similarity=0.089 Sum_probs=138.5
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcch-------------hhc
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHI-------------RQC 120 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~-------------~~~ 120 (382)
++.|..+|..+++.+-........ .....+.+++..++.+..+..+.--+. +.+
T Consensus 87 D~~v~iWd~~~~~~~~~~~~h~~~-------------v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~ 153 (380)
T 3iz6_a 87 DGRLIVWNALTSQKTHAIKLHCPW-------------VMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVL 153 (380)
T ss_dssp TSEEEEEETTTTEEEEEEECCCTT-------------CCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBC
T ss_pred CCeEEEEECCCCccceEEecCCCC-------------EEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeec
Confidence 899999999999988776642111 123455666555555443311100000 000
Q ss_pred cc--ccCCCCCCCC--CCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEE
Q 040693 121 QE--ENNQTTPTSP--DKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMML 196 (382)
Q Consensus 121 ~~--~~~~~~~~~~--~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 196 (382)
.+ +...+..... ..++..+..++.|..+|..+|+.+-.+....... . ..+ +.
T Consensus 154 ~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~----------------------h-~~~-v~ 209 (380)
T 3iz6_a 154 TGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSG----------------------H-TAD-VL 209 (380)
T ss_dssp CCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSS----------------------C-CSC-EE
T ss_pred cCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCC----------------------C-ccC-eE
Confidence 00 0000100011 1234445667899999999999887664321100 0 111 11
Q ss_pred EeeeCceeecEEEEEccCcEEEEEeCC-CCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCC
Q 040693 197 SMYRNKVKHDIVVAVQKSGFAWALDRD-SGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNS 273 (382)
Q Consensus 197 ~~~~~g~~~~~v~~~~~~g~l~ald~~-tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~ 273 (382)
.+.........++.++.|+.+..+|.. +++.+-.+..-. ........ ++..++.+
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~-----~~v~~v~~~p~~~~l~s~----------------- 267 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE-----GDINSVKFFPDGQRFGTG----------------- 267 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS-----SCCCEEEECTTSSEEEEE-----------------
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC-----CCeEEEEEecCCCeEEEE-----------------
Confidence 111111125688889999999999987 444444433211 11122222 44555544
Q ss_pred CCCceEEEEECCCCcEEeeecCCCCC-----CCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecC----Cc
Q 040693 274 TIAGGWVAMDASNGNVLWSTADPSNG-----TAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTG----AT 342 (382)
Q Consensus 274 ~~~g~v~a~d~~tG~~~W~~~~~~~~-----~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~----~~ 342 (382)
..++.|..+|.++|+.+-........ .....+.+ ++.+++.+. .+|.|+..|..+++.+.+.... ..
T Consensus 268 s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~--~dg~i~vwd~~~~~~~~~~~~~~~~h~~ 345 (380)
T 3iz6_a 268 SDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY--SNGDCYVWDTLLAEMVLNLGTLQNSHEG 345 (380)
T ss_dssp CSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC--TTSCEEEEETTTCCEEEEECCSCSSCCC
T ss_pred cCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE--CCCCEEEEECCCCceEEEEecccCCCCC
Confidence 45688999999999988766543211 01122333 345777766 4999999999999988776321 12
Q ss_pred eecceEE-eCCEEEEEeCceeEeecCCccC
Q 040693 343 IYGGASV-SNGCIYMGNGYKVTVGFGNKNF 371 (382)
Q Consensus 343 ~~~~p~~-~~g~lyv~~~~g~~~~~~~~~~ 371 (382)
......+ .+++.+++.+....+.+|.+..
T Consensus 346 ~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 346 RISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred ceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 2233333 3566666555545567777653
No 97
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.48 E-value=9.3e-05 Score=67.90 Aligned_cols=123 Identities=15% Similarity=0.132 Sum_probs=72.7
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEEC--CCCcE
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDA--SNGNV 289 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~--~tG~~ 289 (382)
.+.|+.+|.. |+..-..... ....+.++ ++..+|+... ..+.|+.+|. ++|++
T Consensus 129 ~~~l~~~d~~-g~~~~~~~~~------~~pngi~~spdg~~lyv~~~----------------~~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 129 QGALYSLFPD-HHVKKYFDQV------DISNGLDWSLDHKIFYYIDS----------------LSYSVDAFDYDLQTGQI 185 (297)
T ss_dssp CEEEEEECTT-SCEEEEEEEE------SBEEEEEECTTSCEEEEEEG----------------GGTEEEEEEECTTTCCE
T ss_pred CcEEEEEECC-CCEEEEeecc------ccccceEEcCCCCEEEEecC----------------CCCcEEEEeccCCCCcc
Confidence 3578888875 5443221110 01112222 5667887632 3467888875 78865
Q ss_pred Eeee---cCCCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEe---CCEEEEEeCc
Q 040693 290 LWST---ADPSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVS---NGCIYMGNGY 360 (382)
Q Consensus 290 ~W~~---~~~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~---~g~lyv~~~~ 360 (382)
.-+. ..........-+.++ ++.+|++.. ..+.|+.+|+++|+++-+++.+.....+.++. .++|||++..
T Consensus 186 ~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~-~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 186 SNRRSVYKLEKEEQIPDGMCIDAEGKLWVACY-NGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEEEEEECCGGGCEEEEEEEBTTSCEEEEEE-TTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred cCcEEEEECCCCCCCCCeeEECCCCCEEEEEc-CCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 3221 111100011223444 578888875 45779999999999999998876555556664 3689999874
No 98
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.47 E-value=4.9e-05 Score=71.04 Aligned_cols=222 Identities=13% Similarity=0.085 Sum_probs=129.5
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|..+++.+-........ + ....+.+++..++.+..+
T Consensus 76 Dg~v~iWd~~~~~~~~~~~~~~~~-----------v--~~~~~s~~~~~l~s~~~d------------------------ 118 (340)
T 1got_B 76 DGKLIIWDSYTTNKVHAIPLRSSW-----------V--MTCAYAPSGNYVACGGLD------------------------ 118 (340)
T ss_dssp TTEEEEEETTTCCEEEEEECSSSC-----------E--EEEEECTTSSEEEEEETT------------------------
T ss_pred CCcEEEEECCCCCcceEeecCCcc-----------E--EEEEECCCCCEEEEEeCC------------------------
Confidence 899999999999988776542110 1 124566666666665543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEE--ecCCCcccccccccCCCCCCCCCCCCCCCCCCCceE-EEeeeCceeecEEEE
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYK--QLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMM-LSMYRNKVKHDIVVA 210 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~g~~~~~v~~ 210 (382)
+.+..+|..+++...+. ...... .++. .... .++.+++
T Consensus 119 ---------~~v~iw~~~~~~~~~~~~~~~~~h~--------------------------~~v~~~~~~----~~~~l~s 159 (340)
T 1got_B 119 ---------NICSIYNLKTREGNVRVSRELAGHT--------------------------GYLSCCRFL----DDNQIVT 159 (340)
T ss_dssp ---------CEEEEEETTTCSBSCEEEEEEECCS--------------------------SCEEEEEEE----ETTEEEE
T ss_pred ---------CeEEEEECccCCCcceeEEEecCCC--------------------------ccEEEEEEC----CCCcEEE
Confidence 78888888776532221 111110 1111 1111 1456888
Q ss_pred EccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCc
Q 040693 211 VQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGN 288 (382)
Q Consensus 211 ~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~ 288 (382)
+..|+.+..+|..+|+.+-.+.... ........ ++..++.+ ..++.|..+|.++++
T Consensus 160 ~s~d~~i~~wd~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~sg-----------------~~d~~v~~wd~~~~~ 217 (340)
T 1got_B 160 SSGDTTCALWDIETGQQTTTFTGHT-----GDVMSLSLAPDTRLFVSG-----------------ACDASAKLWDVREGM 217 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCS-----SCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTTCS
T ss_pred EECCCcEEEEECCCCcEEEEEcCCC-----CceEEEEECCCCCEEEEE-----------------eCCCcEEEEECCCCe
Confidence 8899999999999999887765321 12222222 34444444 345889999999999
Q ss_pred EEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCc--eecceEE-eCCEEE-EEeCcee
Q 040693 289 VLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGAT--IYGGASV-SNGCIY-MGNGYKV 362 (382)
Q Consensus 289 ~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~--~~~~p~~-~~g~ly-v~~~~g~ 362 (382)
.+-+....... ...+.+ ++.+++.++ .++.|..+|..+++.+..+..... ...+..+ .+++++ .++.+|.
T Consensus 218 ~~~~~~~h~~~--v~~v~~~p~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~ 293 (340)
T 1got_B 218 CRQTFTGHESD--INAICFFPNGNAFATGS--DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN 293 (340)
T ss_dssp EEEEECCCSSC--EEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE
T ss_pred eEEEEcCCcCC--EEEEEEcCCCCEEEEEc--CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe
Confidence 88776644321 122223 245666666 499999999999998877754331 1122222 244444 4455544
Q ss_pred EeecCCccCCCCCeEEEE
Q 040693 363 TVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 363 ~~~~~~~~~~~g~~l~~~ 380 (382)
+.+|. ..+++.+..+
T Consensus 294 -i~vwd--~~~~~~~~~~ 308 (340)
T 1got_B 294 -CNVWD--ALKADRAGVL 308 (340)
T ss_dssp -EEEEE--TTTCCEEEEE
T ss_pred -EEEEE--cccCcEeeEe
Confidence 45554 3445555443
No 99
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.47 E-value=2.4e-05 Score=75.36 Aligned_cols=226 Identities=15% Similarity=0.084 Sum_probs=132.8
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|+.+|++||+++-...+... +. +.++..+.+++..+++++.+
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~---------~~--~V~sv~fspdg~~lasgs~D------------------------ 168 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQP---------GE--YISSVAWIKEGNYLAVGTSS------------------------ 168 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCST---------TC--CEEEEEECTTSSEEEEEETT------------------------
T ss_pred CCEEEEEECCCCCEEEEEEecCC---------CC--cEEEEEECCCCCEEEEEECC------------------------
Confidence 78999999999999887775311 11 11245677777778777654
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+|+.+......... +..+.. ....+..+..
T Consensus 169 ---------g~v~iWd~~~~~~~~~~~~h~~~-----------------------------v~~~s~---~~~~l~sgs~ 207 (420)
T 4gga_A 169 ---------AEVQLWDVQQQKRLRNMTSHSAR-----------------------------VGSLSW---NSYILSSGSR 207 (420)
T ss_dssp ---------SCEEEEETTTTEEEEEECCCSSC-----------------------------EEEEEE---ETTEEEEEET
T ss_pred ---------CeEEEEEcCCCcEEEEEeCCCCc-----------------------------eEEEee---CCCEEEEEeC
Confidence 89999999999999877543221 111111 1467788888
Q ss_pred CcEEEEEeCCCCCeee-eeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE
Q 040693 214 SGFAWALDRDSGSLIW-SMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL 290 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W-~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~ 290 (382)
++.+...|..+....- ...... ........ ++..+... ..++.+..+|..+++..
T Consensus 208 d~~i~~~d~~~~~~~~~~~~~h~-----~~~~~~~~~~~g~~l~s~-----------------~~D~~v~i~~~~~~~~~ 265 (420)
T 4gga_A 208 SGHIHHHDVRVAEHHVATLSGHS-----QEVCGLRWAPDGRHLASG-----------------GNDNLVNVWPSAPGEGG 265 (420)
T ss_dssp TSEEEEEETTSSSCEEEEEECCS-----SCEEEEEECTTSSEEEEE-----------------ETTSCEEEEESSCCSSC
T ss_pred CCceeEeeecccceeeEEecccc-----cceeeeeecCCCCeeeee-----------------eccccceEEeecccccc
Confidence 9999999987654332 222111 01111111 34444444 33577888898888654
Q ss_pred eeec--CCCCCCCCcceEE---eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEeC--cee
Q 040693 291 WSTA--DPSNGTAPGPVTV---ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGNG--YKV 362 (382)
Q Consensus 291 W~~~--~~~~~~~~~~~~~---~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~--~g~ 362 (382)
+... ..........+.. ...++..++...++.|...|..+|+.+..+.....+.+.... .++.++++++ ++.
T Consensus 266 ~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~ 345 (420)
T 4gga_A 266 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ 345 (420)
T ss_dssp SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC
T ss_pred ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCE
Confidence 3211 1110000111111 224555544335789999999999999998876654433333 4556666553 333
Q ss_pred EeecCCccCCCCCeEEEE
Q 040693 363 TVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 363 ~~~~~~~~~~~g~~l~~~ 380 (382)
+.+| |..+++.+..|
T Consensus 346 -I~iw--d~~~~~~v~~l 360 (420)
T 4gga_A 346 -LVIW--KYPTMAKVAEL 360 (420)
T ss_dssp -EEEE--ETTTCCEEEEE
T ss_pred -EEEE--ECCCCcEEEEE
Confidence 3444 55667777655
No 100
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.46 E-value=1e-05 Score=77.27 Aligned_cols=274 Identities=7% Similarity=-0.101 Sum_probs=150.7
Q ss_pred CcCCCCceeeeeecCcCccceeeeceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCC
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKL 81 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~ 81 (382)
||++|+|++=+..++..+ .+..+| .+..+|++....+-... -..++.|..+|++|++++.+..+......
T Consensus 51 ID~~t~~v~~~i~vG~~P--~i~~sp--Dg~~lyVan~~~~r~~~----G~~~~~VsviD~~T~~vv~~I~v~~~~~~-- 120 (368)
T 1mda_H 51 SCAGCGVTLGHSLGAFLS--LAVAGH--SGSDFALASTSFARSAK----GKRTDYVEVFDPVTFLPIADIELPDAPRF-- 120 (368)
T ss_dssp EETTTTEEEEEEEECTTC--EEEECT--TSSCEEEEEEEETTTTS----SSEEEEEEEECTTTCCEEEEEEETTSCSC--
T ss_pred EECCCCeEEEEEeCCCCC--ceEECC--CCCEEEEEccccccccc----CCCCCEEEEEECCCCCEEEEEECCCcccc--
Confidence 688999998877775433 122222 35679997631000000 00157899999999999999887411100
Q ss_pred CCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEE--EECCCCcEEEEE
Q 040693 82 NEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLA--LDLDTGKIVWYK 159 (382)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~a--ld~~tG~~~W~~ 159 (382)
..|... ....+++++.++|++.... ...+.. ||++| +-+.
T Consensus 121 --~~g~~P--~~ia~SpDGk~lyVan~~~-------------------------------~~~v~V~~iD~~t---v~~i 162 (368)
T 1mda_H 121 --SVGPRV--HIIGNCASSACLLFFLFGS-------------------------------SAAAGLSVPGASD---DQLT 162 (368)
T ss_dssp --CBSCCT--TSEEECTTSSCEEEEECSS-------------------------------SCEEEEEETTTEE---EEEE
T ss_pred --ccCCCc--ceEEEcCCCCEEEEEccCC-------------------------------CCeEEEEEEchhh---ceEE
Confidence 001111 1367888999999975320 156777 89887 3344
Q ss_pred ecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCC-----CCeeeeeccC
Q 040693 160 QLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDS-----GSLIWSMEAG 234 (382)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~t-----G~~~W~~~~~ 234 (382)
..+.. ..+. .+| ....++...++.+..+|.++ |++.|... .
T Consensus 163 ~v~~~----------------------------~~~~---p~g--~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t-~ 208 (368)
T 1mda_H 163 KSASC----------------------------FHIH---PGA--AATHYLGSCPASLAASDLAAAPAAAGIVGAQCT-G 208 (368)
T ss_dssp ECSSC----------------------------CCCE---EEE--TTEEECCCCTTSCEEEECCSSCCCCEECCCCSC-T
T ss_pred ECCCc----------------------------eEEc---cCC--CeEEEEEcCCCCEEEEECccccccCCeEEEEee-e
Confidence 33211 0011 011 23444556788888899997 88777432 0
Q ss_pred CCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE----eeecCC----C--CCCCCcc
Q 040693 235 PGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL----WSTADP----S--NGTAPGP 304 (382)
Q Consensus 235 ~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~----W~~~~~----~--~~~~~~~ 304 (382)
. ...+.... ...+++.+|.. .. +.++.+|..+++.. |..... . .+....+
T Consensus 209 ~-i~vg~~P~-~~~~~~~~~~v-----------------s~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~ 268 (368)
T 1mda_H 209 A-QNCSSQAA-QANYPGMLVWA-----------------VA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQM 268 (368)
T ss_dssp T-SCBCSCCE-EETTTTEEEEC-----------------BS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSC
T ss_pred e-eeCCCCcc-ccccCCEEEEE-----------------cC-CEEEEEECCCCcceEEEEEEeccccccccccccCccee
Confidence 0 00111111 12244555544 34 77999999765422 332110 0 0011112
Q ss_pred eEE--eCCEEEEeee-c-C-----CCcEEEEeCCCCcEeEEEecCCceecceEEeCC-EEEEEeC--ceeEeecCCccCC
Q 040693 305 VTV--ANGVLFGGST-Y-R-----QGPIYAMDVKTGKILWSYDTGATIYGGASVSNG-CIYMGNG--YKVTVGFGNKNFT 372 (382)
Q Consensus 305 ~~~--~~~~v~~~~~-~-~-----~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~~g-~lyv~~~--~g~~~~~~~~~~~ 372 (382)
+.+ +++++|++.. . . .+.+.+||.++++++-+++++..-.+-....++ ++|+++. .+. +.-+|..
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~---VsVID~~ 345 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEV---LDIYDAA 345 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTE---EEEEESS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCe---EEEEECC
Confidence 333 4578998763 1 1 235779999999999888876532222222344 5888776 334 3447888
Q ss_pred CCCeEEEE
Q 040693 373 SGTSLYAF 380 (382)
Q Consensus 373 ~g~~l~~~ 380 (382)
+++.+-..
T Consensus 346 t~kvv~~I 353 (368)
T 1mda_H 346 SDQDQSSV 353 (368)
T ss_dssp SCEEEEEC
T ss_pred CCcEEEEE
Confidence 88877543
No 101
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=98.44 E-value=1.3e-05 Score=79.48 Aligned_cols=172 Identities=14% Similarity=0.191 Sum_probs=100.6
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCC--CCCCCCCCCceEEEeeeCceeecEEEEEccCc--EE
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGP--SPDADFGEAPMMLSMYRNKVKHDIVVAVQKSG--FA 217 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g--~l 217 (382)
+|.|+|||.. |+++|.+=.... ..... .+..|. +. ...|.+-.+|++.+...++.-+-+|+.+...| .+
T Consensus 94 DGmLHaF~a~-G~E~wAfiP~~~--l~~L~-~l~~~~---y~~~~h~Y~VDG~p~~~Dv~~~g~wrtvLvggmg~GG~~~ 166 (570)
T 3hx6_A 94 DGMLHGFDTD-GNETFAFIPSAV--FEKMH-KLTARG---YQGGAHQFYVDGSPVVADAFFGGAWHTVLIGSLRAGGKGL 166 (570)
T ss_dssp SSCEEECCSS-CCCCEEECCHHH--HHHCC-----------CCHHHHHHHHCCCEEEEEEETTEEEEEEEEECTTSCSEE
T ss_pred CceEEEECCC-CcEEEEECCHHH--HHHHH-HHhccC---ccccCcceecCCCCEEEEEEeCCcceEEEEEecCCCCcEE
Confidence 4999999987 999999832211 00000 000000 00 00223457888887766664455566665443 79
Q ss_pred EEEeCCC---CCeeeeeccCCCCCCCCcccceee----eCC-eEEEEecCccccccccCCCCCCCCCceEEEEECCCCcE
Q 040693 218 WALDRDS---GSLIWSMEAGPGGLGGGAMWGAAT----DER-RIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNV 289 (382)
Q Consensus 218 ~ald~~t---G~~~W~~~~~~~~~~g~~~~~~~~----~~~-~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~ 289 (382)
||||..+ .+++|+++.......|.....|.+ .+. .++++.. .+. ......|+.+|++||++
T Consensus 167 yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~G-Y~~----------~~~~~~Lyv~d~~tG~l 235 (570)
T 3hx6_A 167 FALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNG-YSS----------MNDKAALLIIDMETGAI 235 (570)
T ss_dssp EEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECC-BSC----------TTCCEEEEEEETTTCCE
T ss_pred EEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccc-cCC----------CCCccEEEEEECCCCce
Confidence 9999876 789999984332233434444443 122 3333322 110 12346799999999999
Q ss_pred EeeecCCCCC----CCCcceEEe-C-----CEEEEeeecCCCcEEEEeCCCCcE
Q 040693 290 LWSTADPSNG----TAPGPVTVA-N-----GVLFGGSTYRQGPIYAMDVKTGKI 333 (382)
Q Consensus 290 ~W~~~~~~~~----~~~~~~~~~-~-----~~v~~~~~~~~g~l~~ld~~tG~i 333 (382)
+|++...... ..+.+.+++ + +++|++.. .|.|+.||+.+...
T Consensus 236 i~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl--~GnlWRfDl~~~~~ 287 (570)
T 3hx6_A 236 TRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDL--QGNLWRFDLIAGKV 287 (570)
T ss_dssp EEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEET--TSEEEEEECSCSSC
T ss_pred EEEEecCCCCccCCccccceEEecCCCCceeEEEEEeC--CCcEEEEEcCCCCc
Confidence 9998765311 112233343 1 48999985 99999999987654
No 102
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.43 E-value=9.4e-05 Score=81.11 Aligned_cols=252 Identities=13% Similarity=0.069 Sum_probs=136.2
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|..+++.+...........................+.+++..++++..
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~------------------------- 818 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK------------------------- 818 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET-------------------------
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC-------------------------
Confidence 8999999999999888876532111100000000001123456666666666542
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.+..+|..+++.+......... ...-..+..+ +..++++..
T Consensus 819 ---------~~v~~~d~~~~~~~~~~~~~~~~--------------------------~v~~~~~sp~---~~~l~~~~~ 860 (1249)
T 3sfz_A 819 ---------NKVLLFDIHTSGLLAEIHTGHHS--------------------------TIQYCDFSPY---DHLAVIALS 860 (1249)
T ss_dssp ---------TEEEEEETTTCCEEEEEECSSSS--------------------------CCCEEEECSS---TTEEEEECS
T ss_pred ---------CcEEEEEecCCCceeEEcCCCCC--------------------------ceEEEEEcCC---CCEEEEEeC
Confidence 78999999999998887654321 1111111112 467778888
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCcccccc--------------------------
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNF-------------------------- 265 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~-------------------------- 265 (382)
++.+..+|..+++.+........ ....... ++..++.+..+..-..|
T Consensus 861 dg~v~vwd~~~~~~~~~~~~h~~-----~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1249)
T 3sfz_A 861 QYCVELWNIDSRLKVADCRGHLS-----WVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENET 935 (1249)
T ss_dssp SSCEEEEETTTTEEEEEECCCSS-----CEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEE
T ss_pred CCeEEEEEcCCCceeeecCCCcc-----ceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCc
Confidence 88899999888887766553211 1111111 22222222211100000
Q ss_pred --------------------------------ccCCCCC----CCCCceEEEEECCCCcEEeeecCCCCCCCCcceEE--
Q 040693 266 --------------------------------NLKPSKN----STIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTV-- 307 (382)
Q Consensus 266 --------------------------------~~~~~~~----~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~-- 307 (382)
...|... ...++.|..+|..+++........... ...+.+
T Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~--v~~l~~s~ 1013 (1249)
T 3sfz_A 936 MVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKA--VRHIQFTA 1013 (1249)
T ss_dssp EEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSC--CCCEEECS
T ss_pred EEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCc--eEEEEECC
Confidence 0111110 134567888888888877766544322 222333
Q ss_pred eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEeCCEEEEEeCceeEeecCCccCCCCCeEEEE
Q 040693 308 ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVSNGCIYMGNGYKVTVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 308 ~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~ 380 (382)
++..++.++ .++.|..+|..+|+.+........+..-....+++++.++.+|. +.+| |..+|+.+..|
T Consensus 1014 dg~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~-v~vw--d~~~~~~~~~~ 1081 (1249)
T 3sfz_A 1014 DGKTLISSS--EDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGT-VKVW--NVITGRIERDF 1081 (1249)
T ss_dssp SSSCEEEEC--SSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSE-EEEE--ETTTTCCCEEE
T ss_pred CCCEEEEEc--CCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCc-EEEE--ECCCCceeEEE
Confidence 344566655 48999999999998875443333333222234777777777765 3444 44556655444
No 103
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.42 E-value=3.4e-05 Score=74.36 Aligned_cols=221 Identities=14% Similarity=0.058 Sum_probs=127.9
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.++|+.+-++.... ..+ ....+.+++..++.+..+
T Consensus 129 Dg~i~vwd~~~~~~~~~l~~h~-----------~~V--~~v~~~~~~~~l~sgs~D------------------------ 171 (410)
T 1vyh_C 129 DATIKVWDYETGDFERTLKGHT-----------DSV--QDISFDHSGKLLASCSAD------------------------ 171 (410)
T ss_dssp SSCEEEEETTTCCCCEEECCCS-----------SCE--EEEEECTTSSEEEEEETT------------------------
T ss_pred CCeEEEEECCCCcEEEEEeccC-----------CcE--EEEEEcCCCCEEEEEeCC------------------------
Confidence 8899999999998776554211 111 134556665666665543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+++.+-.+......+ .-..+.++ +..|++++.
T Consensus 172 ---------~~i~iwd~~~~~~~~~~~~h~~~V---------------------------~~v~~~p~---~~~l~s~s~ 212 (410)
T 1vyh_C 172 ---------MTIKLWDFQGFECIRTMHGHDHNV---------------------------SSVSIMPN---GDHIVSASR 212 (410)
T ss_dssp ---------SCCCEEETTSSCEEECCCCCSSCE---------------------------EEEEECSS---SSEEEEEET
T ss_pred ---------CeEEEEeCCCCceeEEEcCCCCCE---------------------------EEEEEeCC---CCEEEEEeC
Confidence 788888988888765443222111 01111222 467888999
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
|+.+..+|..+|+.+-.+..... ....... ++..++.+ ..++.|..+|..+++..-
T Consensus 213 D~~i~~wd~~~~~~~~~~~~h~~-----~v~~~~~~~~g~~l~s~-----------------s~D~~v~vwd~~~~~~~~ 270 (410)
T 1vyh_C 213 DKTIKMWEVQTGYCVKTFTGHRE-----WVRMVRPNQDGTLIASC-----------------SNDQTVRVWVVATKECKA 270 (410)
T ss_dssp TSEEEEEETTTCCEEEEEECCSS-----CEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTTCCEEE
T ss_pred CCeEEEEECCCCcEEEEEeCCCc-----cEEEEEECCCCCEEEEE-----------------cCCCeEEEEECCCCceee
Confidence 99999999999998776653211 1111111 34444444 345789999999987765
Q ss_pred eecCCCCCCCCcceEE----------------------eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE
Q 040693 292 STADPSNGTAPGPVTV----------------------ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV 349 (382)
Q Consensus 292 ~~~~~~~~~~~~~~~~----------------------~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~ 349 (382)
+....... ...+.+ .+..++.++ .++.|..+|..+|+.+..+........+..+
T Consensus 271 ~~~~h~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs--~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~ 346 (410)
T 1vyh_C 271 ELREHRHV--VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS--RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 346 (410)
T ss_dssp EECCCSSC--EEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred EecCCCce--EEEEEEcCcccccchhhhccccccccCCCCCEEEEEe--CCCeEEEEECCCCceEEEEECCCCcEEEEEE
Confidence 54332210 000111 134566666 4899999999999998877644333333333
Q ss_pred -eCCE-EEEEeCceeEeecCCccCCCCCeEEE
Q 040693 350 -SNGC-IYMGNGYKVTVGFGNKNFTSGTSLYA 379 (382)
Q Consensus 350 -~~g~-lyv~~~~g~~~~~~~~~~~~g~~l~~ 379 (382)
.+++ |+.++.+| .+.+|.+ .+++.+..
T Consensus 347 ~~~g~~l~s~s~D~-~i~vwd~--~~~~~~~~ 375 (410)
T 1vyh_C 347 HSGGKFILSCADDK-TLRVWDY--KNKRCMKT 375 (410)
T ss_dssp CSSSSCEEEEETTT-EEEEECC--TTSCCCEE
T ss_pred cCCCCEEEEEeCCC-eEEEEEC--CCCceEEE
Confidence 3444 44444454 4556654 44554443
No 104
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.41 E-value=0.00016 Score=65.62 Aligned_cols=170 Identities=14% Similarity=0.115 Sum_probs=105.9
Q ss_pred ceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeC
Q 040693 143 NSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDR 222 (382)
Q Consensus 143 g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~ 222 (382)
+.|..+| +++.+........... -...... .+..++++..++.+..+|
T Consensus 124 ~~i~~~d--~~~~~~~~~~~~~~v~---------------------------~~~~~~~--~~~~l~~~~~d~~i~i~d- 171 (313)
T 3odt_A 124 KTAKVWK--EGSLVYNLQAHNASVW---------------------------DAKVVSF--SENKFLTASADKTIKLWQ- 171 (313)
T ss_dssp SEEEEEE--TTEEEEEEECCSSCEE---------------------------EEEEEET--TTTEEEEEETTSCEEEEE-
T ss_pred CCEEEEc--CCcEEEecccCCCcee---------------------------EEEEccC--CCCEEEEEECCCCEEEEe-
Confidence 8899998 6888887765433211 0111111 156788888899999999
Q ss_pred CCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCC
Q 040693 223 DSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTA 301 (382)
Q Consensus 223 ~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~ 301 (382)
.++....+.... ......... .++.++++ ..++.|..+|.++++.+.+.......
T Consensus 172 -~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~-----------------~~dg~i~i~d~~~~~~~~~~~~~~~~-- 227 (313)
T 3odt_A 172 -NDKVIKTFSGIH----NDVVRHLAVVDDGHFISC-----------------SNDGLIKLVDMHTGDVLRTYEGHESF-- 227 (313)
T ss_dssp -TTEEEEEECSSC----SSCEEEEEEEETTEEEEE-----------------ETTSEEEEEETTTCCEEEEEECCSSC--
T ss_pred -cCceEEEEeccC----cccEEEEEEcCCCeEEEc-----------------cCCCeEEEEECCchhhhhhhhcCCce--
Confidence 445555444311 112222222 45555554 34588999999999999888754321
Q ss_pred CcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEeCceeEeecCCccC
Q 040693 302 PGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGNGYKVTVGFGNKNF 371 (382)
Q Consensus 302 ~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~~g~~~~~~~~~~ 371 (382)
...+.+. ++.++.++ .++.|+.+|..+++.+..+............ .++++++++.+|. +.+|.++.
T Consensus 228 i~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~-i~iw~~~~ 296 (313)
T 3odt_A 228 VYCIKLLPNGDIVSCG--EDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNL-VRIFSQEK 296 (313)
T ss_dssp EEEEEECTTSCEEEEE--TTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSC-EEEEESCG
T ss_pred EEEEEEecCCCEEEEe--cCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCc-EEEEeCCC
Confidence 2223332 45666666 4999999999999999998776543333333 4667777777765 45565543
No 105
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.40 E-value=0.0002 Score=67.38 Aligned_cols=169 Identities=15% Similarity=0.098 Sum_probs=101.3
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
++.|..+|..+|+.+-.+......+ ....+..+ ..+..+++++.|+.+..+|
T Consensus 175 D~~v~lwd~~~~~~~~~~~~h~~~v---------------------------~~~~~~~~-~~g~~l~sgs~Dg~v~~wd 226 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQSFHGHGADV---------------------------LCLDLAPS-ETGNTFVSGGCDKKAMVWD 226 (354)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCE---------------------------EEEEECCC-SSCCEEEEEETTSCEEEEE
T ss_pred CCcEEEEeCCCCeEEEEEcCCCCCe---------------------------EEEEEEeC-CCCCEEEEEeCCCeEEEEE
Confidence 3899999999999887765433211 11111111 1146788899999999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCC
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNG 299 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~ 299 (382)
..+|+.+-.+..-. ........ ++..++.+ ..++.|..+|+++++.+-........
T Consensus 227 ~~~~~~~~~~~~h~-----~~v~~v~~~p~~~~l~s~-----------------s~D~~v~lwd~~~~~~~~~~~~~~~~ 284 (354)
T 2pbi_B 227 MRSGQCVQAFETHE-----SDVNSVRYYPSGDAFASG-----------------SDDATCRLYDLRADREVAIYSKESII 284 (354)
T ss_dssp TTTCCEEEEECCCS-----SCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTTTEEEEEECCTTCC
T ss_pred CCCCcEEEEecCCC-----CCeEEEEEeCCCCEEEEE-----------------eCCCeEEEEECCCCcEEEEEcCCCcc
Confidence 99999877665321 11222222 44555554 34588999999999876555433211
Q ss_pred CCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEE-EeCcee
Q 040693 300 TAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYM-GNGYKV 362 (382)
Q Consensus 300 ~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv-~~~~g~ 362 (382)
.....+.+ ++.+++.+. .++.|..+|..+|+.+-.+........+..+ .+++.++ ++.+|.
T Consensus 285 ~~~~~~~~s~~g~~l~~g~--~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~ 349 (354)
T 2pbi_B 285 FGASSVDFSLSGRLLFAGY--NDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHT 349 (354)
T ss_dssp SCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred cceeEEEEeCCCCEEEEEE--CCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCC
Confidence 11222323 245666666 4899999999999988766433333333333 3455444 444543
No 106
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.40 E-value=3.5e-05 Score=72.86 Aligned_cols=153 Identities=12% Similarity=0.032 Sum_probs=90.4
Q ss_pred ecE-EEEEccCcEEEEEeCCC------CCeee-----eecc--CCCCCCCCcccceee-eCCeEEEEecCccccccccCC
Q 040693 205 HDI-VVAVQKSGFAWALDRDS------GSLIW-----SMEA--GPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKP 269 (382)
Q Consensus 205 ~~~-v~~~~~~g~l~ald~~t------G~~~W-----~~~~--~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~ 269 (382)
+.. ++++..++.+..+|..+ ++.+. .+.. ............... .++.++++
T Consensus 137 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~------------- 203 (397)
T 1sq9_A 137 LSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATG------------- 203 (397)
T ss_dssp -CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEE-------------
T ss_pred CceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEE-------------
Confidence 456 88888899999999988 66655 4321 000001112222222 22344444
Q ss_pred CCCCCCCceEEEEECCCCcEEeeecC---C---CCCCCCcceEE--eCCEEEEeeecCC---CcEEEEeCCCCcEeEEEe
Q 040693 270 SKNSTIAGGWVAMDASNGNVLWSTAD---P---SNGTAPGPVTV--ANGVLFGGSTYRQ---GPIYAMDVKTGKILWSYD 338 (382)
Q Consensus 270 ~~~~~~~g~v~a~d~~tG~~~W~~~~---~---~~~~~~~~~~~--~~~~v~~~~~~~~---g~l~~ld~~tG~ilw~~~ 338 (382)
..++.|..+|.++++.+.+... . ... ...+.+ ++.++++++. + +.|..+|..+++.+.++.
T Consensus 204 ----~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~--i~~i~~~~~~~~l~~~~~--d~~~g~i~i~d~~~~~~~~~~~ 275 (397)
T 1sq9_A 204 ----FNNGTVQISELSTLRPLYNFESQHSMINNSNS--IRSVKFSPQGSLLAIAHD--SNSFGCITLYETEFGERIGSLS 275 (397)
T ss_dssp ----CTTSEEEEEETTTTEEEEEEECCC---CCCCC--EEEEEECSSTTEEEEEEE--ETTEEEEEEEETTTCCEEEEEC
T ss_pred ----eCCCcEEEEECCCCceeEEEeccccccccCCc--cceEEECCCCCEEEEEec--CCCCceEEEEECCCCcccceec
Confidence 4468899999999999998876 2 211 122223 3456776664 7 899999999999999887
Q ss_pred c-------------CCceecceEE--eCCEEEEEeCceeEeecCCccCCCCCeEEEEE
Q 040693 339 T-------------GATIYGGASV--SNGCIYMGNGYKVTVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 339 ~-------------~~~~~~~p~~--~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~~ 381 (382)
. .......... .+..|+.++.+|. +.+| |..+++.+..+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iw--d~~~~~~~~~~~ 330 (397)
T 1sq9_A 276 VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK-LRFW--DVKTKERITTLN 330 (397)
T ss_dssp BC--------CCBSBSSCEEEEEECSSSSEEEEEETTSE-EEEE--ETTTTEEEEEEE
T ss_pred cCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCe-EEEE--EcCCCceeEEEe
Confidence 5 2222233333 2344555555554 4455 445577777664
No 107
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.39 E-value=8e-05 Score=70.66 Aligned_cols=256 Identities=13% Similarity=0.069 Sum_probs=137.8
Q ss_pred cCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCC
Q 040693 31 KGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNL 110 (382)
Q Consensus 31 ~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~ 110 (382)
...+|+........ .++.|+.+|.+||+++-+.... ... ..++++++..+|++....
T Consensus 15 ~~~~yv~~~~~~~~--------~d~~v~v~D~~t~~~~~~i~~g------------~~p---~i~~spdg~~lyv~~~~~ 71 (361)
T 2oiz_A 15 ENRIYVMDSVFMHL--------TESRVHVYDYTNGKFLGMVPTA------------FNG---HVQVSNDGKKIYTMTTYH 71 (361)
T ss_dssp GGEEEEEECCGGGG--------GGCEEEEEETTTCCEEEEEECC------------EEE---EEEECTTSSEEEEEEEEE
T ss_pred CCEEEEECCCCCcc--------ccCeEEEEECCCCeEEEEecCC------------CCC---ceEECCCCCEEEEEEecc
Confidence 45688866422111 1678999999999998665542 111 257888889999975310
Q ss_pred CCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCC
Q 040693 111 YSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFG 190 (382)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (382)
.+...+..++.|..+|..|++++-+........ ...
T Consensus 72 -----------------------~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~---------------------~~g 107 (361)
T 2oiz_A 72 -----------------------ERITRGKRSDVVEVWDADKLTFEKEISLPPKRV---------------------QGL 107 (361)
T ss_dssp -----------------------TTSSSSCEEEEEEEEETTTCCEEEEEEECTTBC---------------------CBC
T ss_pred -----------------------cccccCCCCCEEEEEECcCCcEEEEEEcCcccc---------------------ccC
Confidence 000001113679999999999999887653210 001
Q ss_pred CCceEEEeeeCceeecEEEEEcc--CcEEEEEeCCCCCeeee-eccCCCCCCCCcccceee--eCCeEEEEecCcccccc
Q 040693 191 EAPMMLSMYRNKVKHDIVVAVQK--SGFAWALDRDSGSLIWS-MEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNF 265 (382)
Q Consensus 191 ~~p~~~~~~~~g~~~~~v~~~~~--~g~l~ald~~tG~~~W~-~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~ 265 (382)
..|.-..+.++| ..+|+... ++.+..+|.++++++-. .+.+. .++... ++...|+..
T Consensus 108 ~~p~~i~~spdg---~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-------~~~v~~~p~~~~~~~~~-------- 169 (361)
T 2oiz_A 108 NYDGLFRQTTDG---KFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-------CWSVIPQPNRPRSFMTI-------- 169 (361)
T ss_dssp CCGGGEEECTTS---SEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-------EEEEEECTTSSSEEEEE--------
T ss_pred CCcceEEECCCC---CEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-------cceeEEcCCCCeeEEEE--------
Confidence 223333333344 46666543 57899999999998877 65431 111111 222333332
Q ss_pred ccCCCCCCCCCceEEEEECCC-CcEEeeecCCC-----CCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEe--EEE
Q 040693 266 NLKPSKNSTIAGGWVAMDASN-GNVLWSTADPS-----NGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKIL--WSY 337 (382)
Q Consensus 266 ~~~~~~~~~~~g~v~a~d~~t-G~~~W~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~il--w~~ 337 (382)
..+|.+..++..+ |+..++..... .........-++..+++.+. ++.++.+|..++++. -.+
T Consensus 170 --------~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~v~v~d~~~~~~~~~~~~ 239 (361)
T 2oiz_A 170 --------CGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSY--YGNVYSADFSGDEVKVDGPW 239 (361)
T ss_dssp --------ETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBT--TSEEEEEECSSSSCEEEEEE
T ss_pred --------CCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeC--CCeEEEEEecCCCceecccc
Confidence 2245666666654 77664432100 00011111233445555553 789999998765432 122
Q ss_pred ecCC------cee-c---ceEE--eCCEEEEEeC-cee-------EeecCCccCCCCCeEEEEE
Q 040693 338 DTGA------TIY-G---GASV--SNGCIYMGNG-YKV-------TVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 338 ~~~~------~~~-~---~p~~--~~g~lyv~~~-~g~-------~~~~~~~~~~~g~~l~~~~ 381 (382)
++.. ... . ..++ .++++|+... ++. ...++.+|..+++.+-.+.
T Consensus 240 ~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~ 303 (361)
T 2oiz_A 240 SLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP 303 (361)
T ss_dssp ESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE
T ss_pred cccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe
Confidence 2111 000 0 1222 3589999864 221 1234567788888776543
No 108
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.36 E-value=0.00013 Score=66.44 Aligned_cols=226 Identities=16% Similarity=0.086 Sum_probs=130.2
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|+.+|.+||+.+-....... ..+..+..+.+++..++.+..+
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~-----------~~~V~~v~~~~~~~~l~sgs~D------------------------ 88 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQP-----------GEYISSVAWIKEGNYLAVGTSS------------------------ 88 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCST-----------TCCEEEEEECTTSSEEEEEETT------------------------
T ss_pred CCEEEEEECCCCCEEEEEEecCC-----------CCeEEEEEECCCCCEEEEEECC------------------------
Confidence 78999999999999887765211 1111235667776777766543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|...|..+|+.+...+...... .... .....+..+..
T Consensus 89 ---------g~v~iw~~~~~~~~~~~~~h~~~~-----------------------------~~~~---~~~~~l~s~~~ 127 (318)
T 4ggc_A 89 ---------AEVQLWDVQQQKRLRNMTSHSARV-----------------------------GSLS---WNSYILSSGSR 127 (318)
T ss_dssp ---------SEEEEEETTTTEEEEEEECCSSCE-----------------------------EEEE---EETTEEEEEET
T ss_pred ---------CcEEEeecCCceeEEEecCccceE-----------------------------EEee---cCCCEEEEEec
Confidence 899999999999998876543211 1111 11456777888
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
++.+...+..++...-...... ......... ++..++.+ ..++.|..+|.++++...
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~s~-----------------~~d~~i~iwd~~~~~~~~ 186 (318)
T 4ggc_A 128 SGHIHHHDVRVAEHHVATLSGH----SQEVCGLRWAPDGRHLASG-----------------GNDNLVNVWPSAPGEGGW 186 (318)
T ss_dssp TSEEEEEETTSSSCEEEEEECC----SSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEESSCBTTBS
T ss_pred CCceEeeecCCCceeEEEEcCc----cCceEEEEEcCCCCEEEEE-----------------ecCcceeEEECCCCcccc
Confidence 8888888877665433322111 001111111 34445444 345789999999987543
Q ss_pred eecCCCCCCCCcc---eEE---eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEeC--cee
Q 040693 292 STADPSNGTAPGP---VTV---ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGNG--YKV 362 (382)
Q Consensus 292 ~~~~~~~~~~~~~---~~~---~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~--~g~ 362 (382)
........ ...+ +.. ....++..+...++.|...|..+++..........+...... .++.++++++ ++.
T Consensus 187 ~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~ 265 (318)
T 4ggc_A 187 VPLQTFTQ-HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ 265 (318)
T ss_dssp CCSEEECC-CCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC
T ss_pred cceeeecc-cCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCE
Confidence 32211100 1111 111 224555554435678999999988888777665544333322 4566666553 333
Q ss_pred EeecCCccCCCCCeEEEE
Q 040693 363 TVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 363 ~~~~~~~~~~~g~~l~~~ 380 (382)
+.+| |..+|+.+..|
T Consensus 266 -i~iw--d~~~~~~~~~l 280 (318)
T 4ggc_A 266 -LVIW--KYPTMAKVAEL 280 (318)
T ss_dssp -EEEE--ETTTCCEEEEE
T ss_pred -EEEE--ECCCCcEEEEE
Confidence 3444 45667777665
No 109
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.35 E-value=4.8e-05 Score=70.61 Aligned_cols=209 Identities=10% Similarity=-0.005 Sum_probs=120.8
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCcee--eCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSI--DPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTS 131 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (382)
++.|..+|..+++.+........ + ....+ .+++..++.+..+
T Consensus 107 dg~v~iwd~~~~~~~~~~~~~~~------------v--~~~~~~~~~~~~~l~~~~~d---------------------- 150 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQIAQHDAP------------V--KTIHWIKAPNYSCVMTGSWD---------------------- 150 (368)
T ss_dssp TSEEEEEETTTTEEEEEEECSSC------------E--EEEEEEECSSCEEEEEEETT----------------------
T ss_pred CCcEEEEEcCCCCceeeccccCc------------e--EEEEEEeCCCCCEEEEccCC----------------------
Confidence 88999999999998765432111 1 12333 4454455555443
Q ss_pred CCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEE
Q 040693 132 PDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAV 211 (382)
Q Consensus 132 ~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~ 211 (382)
+.|..+|..+++.+..+...... .... .....++++
T Consensus 151 -----------g~i~vwd~~~~~~~~~~~~~~~~----------------------------~~~~-----~~~~~~~~~ 186 (368)
T 3mmy_A 151 -----------KTLKFWDTRSSNPMMVLQLPERC----------------------------YCAD-----VIYPMAVVA 186 (368)
T ss_dssp -----------SEEEEECSSCSSCSEEEECSSCE----------------------------EEEE-----EETTEEEEE
T ss_pred -----------CcEEEEECCCCcEEEEEecCCCc----------------------------eEEE-----ecCCeeEEE
Confidence 89999999999999888765321 0111 114567777
Q ss_pred ccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCC----eEEEEecCccccccccCCCCCCCCCceEEEEECCCC
Q 040693 212 QKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDER----RIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNG 287 (382)
Q Consensus 212 ~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG 287 (382)
..++.+..+|..+....+......... ............ .++++ ..++.+..+|..++
T Consensus 187 ~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----------------~~dg~i~i~~~~~~ 248 (368)
T 3mmy_A 187 TAERGLIVYQLENQPSEFRRIESPLKH-QHRCVAIFKDKQNKPTGFALG-----------------SIEGRVAIHYINPP 248 (368)
T ss_dssp EGGGCEEEEECSSSCEEEEECCCSCSS-CEEEEEEEECTTSCEEEEEEE-----------------ETTSEEEEEESSCS
T ss_pred eCCCcEEEEEeccccchhhhccccccC-CCceEEEcccCCCCCCeEEEe-----------------cCCCcEEEEecCCC
Confidence 788889999998877666654322100 001111111111 14443 34588889998887
Q ss_pred ---cEEeeecCCCCCC----------CCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE--e
Q 040693 288 ---NVLWSTADPSNGT----------APGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV--S 350 (382)
Q Consensus 288 ---~~~W~~~~~~~~~----------~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~ 350 (382)
+.+.......... ....+.+ ++.+++.++ .+|.|..+|..+++.+.++............ .
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 326 (368)
T 3mmy_A 249 NPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG--SDGRFSFWDKDARTKLKTSEQLDQPISACCFNHN 326 (368)
T ss_dssp CHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE--TTSCEEEEETTTTEEEEECCCCSSCEEEEEECTT
T ss_pred CccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc--cCCeEEEEECCCCcEEEEecCCCCCceEEEECCC
Confidence 4444443322100 0112223 234666666 4999999999999998887654433334444 3
Q ss_pred CCEEEEEeCcee
Q 040693 351 NGCIYMGNGYKV 362 (382)
Q Consensus 351 ~g~lyv~~~~g~ 362 (382)
+..|..++.++.
T Consensus 327 g~~l~~~s~d~~ 338 (368)
T 3mmy_A 327 GNIFAYASSYDW 338 (368)
T ss_dssp SSCEEEEECCCS
T ss_pred CCeEEEEecccc
Confidence 445555666654
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.35 E-value=4.6e-05 Score=74.09 Aligned_cols=151 Identities=10% Similarity=-0.070 Sum_probs=92.8
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
+..|++++.|+.+..+|..+++.+..+..+-. .......+ ++..++.+ ..++.|..+|
T Consensus 210 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~----~~v~~~~~sd~~~l~s~-----------------~~d~~v~vwd 268 (450)
T 2vdu_B 210 HQFIITSDRDEHIKISHYPQCFIVDKWLFGHK----HFVSSICCGKDYLLLSA-----------------GGDDKIFAWD 268 (450)
T ss_dssp CEEEEEEETTSCEEEEEESCTTCEEEECCCCS----SCEEEEEECSTTEEEEE-----------------ESSSEEEEEE
T ss_pred CcEEEEEcCCCcEEEEECCCCceeeeeecCCC----CceEEEEECCCCEEEEE-----------------eCCCeEEEEE
Confidence 35788888899999999999988766432211 12222222 55666655 3458899999
Q ss_pred CCCCcEEeeecCCC-----------------------CCCCCcceEE--eCCEEEEeeecCCCcEEEEeC--CCC---cE
Q 040693 284 ASNGNVLWSTADPS-----------------------NGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDV--KTG---KI 333 (382)
Q Consensus 284 ~~tG~~~W~~~~~~-----------------------~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~--~tG---~i 333 (382)
.++|+.+-...... .......+.. ++..++++.. .++.|..+|. .++ +.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-~d~~i~iw~~~~~~~~~l~~ 347 (450)
T 2vdu_B 269 WKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVE-ATKCIIILEMSEKQKGDLAL 347 (450)
T ss_dssp TTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEET-TCSEEEEEEECSSSTTCEEE
T ss_pred CCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEEC-CCCeEEEEEeccCCCCceee
Confidence 99999887765321 0001111222 2457777662 3788999998 565 44
Q ss_pred eEEEecCCceecceEEeCCEEEEEeCc-------eeEeecCCccCCCCCeEE
Q 040693 334 LWSYDTGATIYGGASVSNGCIYMGNGY-------KVTVGFGNKNFTSGTSLY 378 (382)
Q Consensus 334 lw~~~~~~~~~~~p~~~~g~lyv~~~~-------g~~~~~~~~~~~~g~~l~ 378 (382)
+-.+... .......+..+.++++... ...+.+|.++..+|+..|
T Consensus 348 ~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~~ 398 (450)
T 2vdu_B 348 KQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFVV 398 (450)
T ss_dssp EEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEEE
T ss_pred ccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEEE
Confidence 5555544 3344555666788887543 223567888887776543
No 111
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.33 E-value=0.00027 Score=64.33 Aligned_cols=91 Identities=11% Similarity=0.031 Sum_probs=59.4
Q ss_pred CCceEEEEECC-CCcE---EeeecCCCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE
Q 040693 275 IAGGWVAMDAS-NGNV---LWSTADPSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV 349 (382)
Q Consensus 275 ~~g~v~a~d~~-tG~~---~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~ 349 (382)
..+.|+.+|.. +|+. .-...... .....+.++ ++.+|+++ .+.|..+|++ |+.+.++..+.. ..+.++
T Consensus 191 ~~~~i~~~~~~~~g~~~~~~~~~~~~~--~~p~~i~~d~~G~l~v~~---~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f 263 (296)
T 3e5z_A 191 GDNATHRYCLNARGETEYQGVHFTVEP--GKTDGLRVDAGGLIWASA---GDGVHVLTPD-GDELGRVLTPQT-TSNLCF 263 (296)
T ss_dssp TTTEEEEEEECSSSCEEEEEEEECCSS--SCCCSEEEBTTSCEEEEE---TTEEEEECTT-SCEEEEEECSSC-CCEEEE
T ss_pred CCCeEEEEEECCCCcCcCCCeEeeCCC--CCCCeEEECCCCCEEEEc---CCeEEEECCC-CCEEEEEECCCC-ceeEEE
Confidence 34779999986 6765 21221111 112234454 57889888 7899999987 999888887765 444455
Q ss_pred e---CCEEEEEeCceeEeecCCccCCCCCe
Q 040693 350 S---NGCIYMGNGYKVTVGFGNKNFTSGTS 376 (382)
Q Consensus 350 ~---~g~lyv~~~~g~~~~~~~~~~~~g~~ 376 (382)
. ++.||+++..+ +|.++.++.++
T Consensus 264 ~~~d~~~L~v~t~~~----l~~~~~~~~~~ 289 (296)
T 3e5z_A 264 GGPEGRTLYMTVSTE----FWSIETNVRGL 289 (296)
T ss_dssp ESTTSCEEEEEETTE----EEEEECSCCBC
T ss_pred ECCCCCEEEEEcCCe----EEEEEcccccc
Confidence 2 24799998763 57777777654
No 112
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.33 E-value=0.00019 Score=78.76 Aligned_cols=223 Identities=13% Similarity=0.044 Sum_probs=137.1
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|..+|+.+.+..... ..+ ....+.+++..++.+..+
T Consensus 636 d~~i~vw~~~~~~~~~~~~~h~-----------~~v--~~~~~s~~~~~l~s~~~d------------------------ 678 (1249)
T 3sfz_A 636 DKTLQVFKAETGEKLLDIKAHE-----------DEV--LCCAFSSDDSYIATCSAD------------------------ 678 (1249)
T ss_dssp TSCEEEEETTTCCEEEEECCCS-----------SCE--EEEEECTTSSEEEEEETT------------------------
T ss_pred CCeEEEEECCCCCEEEEeccCC-----------CCE--EEEEEecCCCEEEEEeCC------------------------
Confidence 8899999999999888765311 111 235677776777776543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+|+.+..+......++ -..+..++ ....+++++.
T Consensus 679 ---------~~v~vwd~~~~~~~~~~~~~~~~v~---------------------------~~~~~~~~-~~~~l~sg~~ 721 (1249)
T 3sfz_A 679 ---------KKVKIWDSATGKLVHTYDEHSEQVN---------------------------CCHFTNKS-NHLLLATGSN 721 (1249)
T ss_dssp ---------SEEEEEETTTCCEEEEEECCSSCEE---------------------------EEEECSSS-SCCEEEEEET
T ss_pred ---------CeEEEEECCCCceEEEEcCCCCcEE---------------------------EEEEecCC-CceEEEEEeC
Confidence 8999999999999988875433211 01111111 2456778888
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
++.+..+|..+|+.+....... ........ ++..++.+ ..++.|..+|..+++...
T Consensus 722 d~~v~vwd~~~~~~~~~~~~h~-----~~v~~~~~sp~~~~l~s~-----------------s~dg~v~vwd~~~~~~~~ 779 (1249)
T 3sfz_A 722 DFFLKLWDLNQKECRNTMFGHT-----NSVNHCRFSPDDELLASC-----------------SADGTLRLWDVRSANERK 779 (1249)
T ss_dssp TSCEEEEETTSSSEEEEECCCS-----SCEEEEEECSSTTEEEEE-----------------ESSSEEEEEEGGGTEEEE
T ss_pred CCeEEEEECCCcchhheecCCC-----CCEEEEEEecCCCEEEEE-----------------ECCCeEEEEeCCCCcccc
Confidence 9999999999999887765321 12222222 45556655 345889999999998887
Q ss_pred eecCCCCC-------------CCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCc-eecceEE--eCCEEE
Q 040693 292 STADPSNG-------------TAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGAT-IYGGASV--SNGCIY 355 (382)
Q Consensus 292 ~~~~~~~~-------------~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~-~~~~p~~--~~g~ly 355 (382)
........ .......-++..+++++ ++.+..+|..+++.+.....+.. ......+ .+..++
T Consensus 780 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 856 (1249)
T 3sfz_A 780 SINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA---KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAV 856 (1249)
T ss_dssp EEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE---TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEE
T ss_pred eecccccccccCCccccccceEEEEEECCCCCEEEEEc---CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEE
Confidence 76543210 00111111345666655 79999999999999888865432 2222222 344444
Q ss_pred EEeCceeEeecCCccCCCCCeEE
Q 040693 356 MGNGYKVTVGFGNKNFTSGTSLY 378 (382)
Q Consensus 356 v~~~~g~~~~~~~~~~~~g~~l~ 378 (382)
+++.+|. +.+|.++ +++.+.
T Consensus 857 ~~~~dg~-v~vwd~~--~~~~~~ 876 (1249)
T 3sfz_A 857 IALSQYC-VELWNID--SRLKVA 876 (1249)
T ss_dssp EECSSSC-EEEEETT--TTEEEE
T ss_pred EEeCCCe-EEEEEcC--CCceee
Confidence 4545543 4555443 344443
No 113
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.30 E-value=0.00014 Score=64.84 Aligned_cols=138 Identities=14% Similarity=0.047 Sum_probs=75.9
Q ss_pred EEEE-ccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeee-CCeEEEEecCccccccccCCCCCCCCCceEEEEECC
Q 040693 208 VVAV-QKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATD-ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS 285 (382)
Q Consensus 208 v~~~-~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~ 285 (382)
+++. ..++.++.+|..+.......... .....+.+++ ++.+|++.. ..+.|..+|+.
T Consensus 121 l~v~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~p~~i~~~~~g~l~v~~~----------------~~~~i~~~~~~ 179 (270)
T 1rwi_B 121 VYVADRGNNRVVKLAAGSKTQTVLPFTG-----LNDPDGVAVDNSGNVYVTDT----------------DNNRVVKLEAE 179 (270)
T ss_dssp EEEEEGGGTEEEEECTTCCSCEECCCCS-----CCSCCCEEECTTCCEEEEEG----------------GGTEEEEECTT
T ss_pred EEEEECCCCEEEEEECCCceeEeecccc-----CCCceeEEEeCCCCEEEEEC----------------CCCEEEEEecC
Confidence 4444 55678999986655443322111 0112233333 466888632 23679999988
Q ss_pred CCcEEeeecCCCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC-ceecceEE-eCCEEEEEeCcee
Q 040693 286 NGNVLWSTADPSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA-TIYGGASV-SNGCIYMGNGYKV 362 (382)
Q Consensus 286 tG~~~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~-~~~~~p~~-~~g~lyv~~~~g~ 362 (382)
+++......... .....+.++ ++.+|+++. .++.|+.+|+++.. .......+ ......++ .+|+||+++....
T Consensus 180 ~~~~~~~~~~~~--~~p~~i~~d~~g~l~v~~~-~~~~v~~~~~~~~~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 180 SNNQVVLPFTDI--TAPWGIAVDEAGTVYVTEH-NTNQVVKLLAGSTT-STVLPFTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp TCCEEECCCSSC--CSEEEEEECTTCCEEEEET-TTSCEEEECTTCSC-CEECCCCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred CCceEeecccCC--CCceEEEECCCCCEEEEEC-CCCcEEEEcCCCCc-ceeeccCCCCCceeEEECCCCCEEEEECCCC
Confidence 776543322111 112234454 468888874 46789999987543 33333222 11223334 3688999987665
Q ss_pred EeecCCcc
Q 040693 363 TVGFGNKN 370 (382)
Q Consensus 363 ~~~~~~~~ 370 (382)
.+.+|.++
T Consensus 256 ~v~~~~~~ 263 (270)
T 1rwi_B 256 RVVKLTSL 263 (270)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCC
Confidence 55555554
No 114
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.28 E-value=0.00017 Score=68.45 Aligned_cols=144 Identities=12% Similarity=0.017 Sum_probs=86.1
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCc---EEE
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSG---FAW 218 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g---~l~ 218 (382)
++.|..+|..+++.+.++....... +......-..+.+++ ...++++..++ .+.
T Consensus 187 dg~v~iwd~~~~~~~~~~~~~~~~~---------------------~~~~~v~~~~~~~~~--~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 187 SNFASIWDLKAKKEVIHLSYTSPNS---------------------GIKQQLSVVEWHPKN--STRVATATGSDNDPSIL 243 (416)
T ss_dssp SSCEEEEETTTTEEEEEECCCCCSS---------------------CCCCCEEEEEECSSC--TTEEEEEECCSSSCCCC
T ss_pred CCCEEEEECCCCCcceEEecccccc---------------------ccCCceEEEEECCCC--CCEEEEEECCCCCceEE
Confidence 3889999999999988886653100 000111112222333 35777888787 999
Q ss_pred EEeCCCC-CeeeeeccCCCCCCCCcccceee---eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 219 ALDRDSG-SLIWSMEAGPGGLGGGAMWGAAT---DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 219 ald~~tG-~~~W~~~~~~~~~~g~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
.+|..++ +.+..+.... ......... ++..++.+ ..++.|..+|.++++.+.+..
T Consensus 244 ~~d~~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~~l~s~-----------------~~dg~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 244 IWDLRNANTPLQTLNQGH----QKGILSLDWCHQDEHLLLSS-----------------GRDNTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp EEETTSTTSCSBCCCSCC----SSCEEEEEECSSCSSCEEEE-----------------ESSSEEEEECSSSCCEEEEEE
T ss_pred EEeCCCCCCCcEEeecCc----cCceeEEEeCCCCCCeEEEE-----------------eCCCCEEEeeCCCCccceeec
Confidence 9999987 4444433111 112222222 34455554 345889999999999998877
Q ss_pred CCCCCCCCcceEEe--C-CEEEEeeecCCCcEEEEeCCCCcE
Q 040693 295 DPSNGTAPGPVTVA--N-GVLFGGSTYRQGPIYAMDVKTGKI 333 (382)
Q Consensus 295 ~~~~~~~~~~~~~~--~-~~v~~~~~~~~g~l~~ld~~tG~i 333 (382)
...... ..+.+. + .+++.++ .++.|..+|..+++.
T Consensus 303 ~~~~~v--~~~~~s~~~~~~l~s~~--~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 303 ARGNWC--FKTKFAPEAPDLFACAS--FDNKIEVQTLQNLTN 340 (416)
T ss_dssp CSSSCC--CCEEECTTCTTEEEECC--SSSEEEEEESCCCCC
T ss_pred CCCCce--EEEEECCCCCCEEEEEe--cCCcEEEEEccCCCC
Confidence 544322 223332 3 4566655 489999999987664
No 115
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.26 E-value=0.00032 Score=66.06 Aligned_cols=222 Identities=14% Similarity=0.045 Sum_probs=125.8
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeC---CCCeEEEEcCCCCCCCcchhhcccccCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDP---IRNHVYIATGNLYSVPLHIRQCQEENNQTTPT 130 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (382)
++.|..+|..+++.+.......... ...+.+ +...++++..+
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~--------------------- 165 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEETVY--------------SHHMSPVSTKHCLVAVGTRG--------------------- 165 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEE--------------EEEECSSCSSCCEEEEEESS---------------------
T ss_pred CCeEEEeeCCCCccceeccCCCcee--------------eeEeecCCCCCcEEEEEcCC---------------------
Confidence 8899999999999998887532211 111221 22355555443
Q ss_pred CCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEE
Q 040693 131 SPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVA 210 (382)
Q Consensus 131 ~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~ 210 (382)
+.|..+|..+++.+..+......+ .-.....++ ..++++
T Consensus 166 ------------~~v~~~d~~~~~~~~~~~~~~~~v---------------------------~~~~~~~~~--~~ll~~ 204 (408)
T 4a11_B 166 ------------PKVQLCDLKSGSCSHILQGHRQEI---------------------------LAVSWSPRY--DYILAT 204 (408)
T ss_dssp ------------SSEEEEESSSSCCCEEECCCCSCE---------------------------EEEEECSSC--TTEEEE
T ss_pred ------------CeEEEEeCCCcceeeeecCCCCcE---------------------------EEEEECCCC--CcEEEE
Confidence 889999999999887765432211 111122222 336778
Q ss_pred EccCcEEEEEeCCCCC-eeeeeccCCC----------CCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCc
Q 040693 211 VQKSGFAWALDRDSGS-LIWSMEAGPG----------GLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAG 277 (382)
Q Consensus 211 ~~~~g~l~ald~~tG~-~~W~~~~~~~----------~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g 277 (382)
+..++.+..+|..+++ .+...+.... ............ ++..++++ ..++
T Consensus 205 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-----------------~~dg 267 (408)
T 4a11_B 205 ASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV-----------------GTDN 267 (408)
T ss_dssp EETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE-----------------ETTS
T ss_pred EcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe-----------------cCCC
Confidence 8899999999998876 3332221100 000111122222 44455554 3457
Q ss_pred eEEEEECCCCcEEeeecCCCCC--CCCcceEE---eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eC
Q 040693 278 GWVAMDASNGNVLWSTADPSNG--TAPGPVTV---ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SN 351 (382)
Q Consensus 278 ~v~a~d~~tG~~~W~~~~~~~~--~~~~~~~~---~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~ 351 (382)
.|..+|..+++........... ........ .++.+++... ++.|..+|..+++.+.++...........+ .+
T Consensus 268 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~ 345 (408)
T 4a11_B 268 RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY--GSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSN 345 (408)
T ss_dssp CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE--TTEEEEEETTTCCEEEEECCCSSCEEEEEEETT
T ss_pred eEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEec--CCEEEEEECcCCcceeeeccCCCeEEEEEEcCC
Confidence 8999999999876554322110 01111111 1234444443 899999999999999988754443334444 34
Q ss_pred CE-EEEEeCceeEeecCCccC
Q 040693 352 GC-IYMGNGYKVTVGFGNKNF 371 (382)
Q Consensus 352 g~-lyv~~~~g~~~~~~~~~~ 371 (382)
++ |+.++.+|. +.+|.++.
T Consensus 346 ~~~l~s~~~dg~-i~iw~~~~ 365 (408)
T 4a11_B 346 FQELYSGSRDCN-ILAWVPSL 365 (408)
T ss_dssp TTEEEEEETTSC-EEEEEECC
T ss_pred CCEEEEECCCCe-EEEEeCCC
Confidence 44 544555554 55665544
No 116
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.26 E-value=6.7e-05 Score=70.03 Aligned_cols=181 Identities=11% Similarity=0.015 Sum_probs=104.7
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.++++..-...+... ...+ ....+.+++..++++..+
T Consensus 73 dg~i~vwd~~~~~~~~~~~~~~~---------~~~v--~~~~~~~~~~~l~~~~~d------------------------ 117 (372)
T 1k8k_C 73 DRNAYVWTLKGRTWKPTLVILRI---------NRAA--RCVRWAPNEKKFAVGSGS------------------------ 117 (372)
T ss_dssp TSCEEEEEEETTEEEEEEECCCC---------SSCE--EEEEECTTSSEEEEEETT------------------------
T ss_pred CCeEEEEECCCCeeeeeEEeecC---------CCce--eEEEECCCCCEEEEEeCC------------------------
Confidence 88999999989886655543211 0011 134566666677776643
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+++..+........ ......-..+..+ +..++++..
T Consensus 118 ---------~~v~i~d~~~~~~~~~~~~~~~~-----------------------~~~~i~~~~~~~~---~~~l~~~~~ 162 (372)
T 1k8k_C 118 ---------RVISICYFEQENDWWVCKHIKKP-----------------------IRSTVLSLDWHPN---SVLLAAGSC 162 (372)
T ss_dssp ---------SSEEEEEEETTTTEEEEEEECTT-----------------------CCSCEEEEEECTT---SSEEEEEET
T ss_pred ---------CEEEEEEecCCCcceeeeeeecc-----------------------cCCCeeEEEEcCC---CCEEEEEcC
Confidence 77888887777755543322110 0011111122222 457888888
Q ss_pred CcEEEEEeC------------------CCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCC
Q 040693 214 SGFAWALDR------------------DSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNS 273 (382)
Q Consensus 214 ~g~l~ald~------------------~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~ 273 (382)
++.+..+|. .+++.+-.+.... ........ ++..++.+
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~----------------- 220 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC-----GWVHGVCFSANGSRVAWV----------------- 220 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS-----SCEEEEEECSSSSEEEEE-----------------
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCC-----CeEEEEEECCCCCEEEEE-----------------
Confidence 999999994 3566665554211 11222222 44556655
Q ss_pred CCCceEEEEECCCCcEEeeecCCCCCCCCcceEE-eCCEEEEeeecCCCcEEEEeCCC
Q 040693 274 TIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTV-ANGVLFGGSTYRQGPIYAMDVKT 330 (382)
Q Consensus 274 ~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~g~l~~ld~~t 330 (382)
..++.|..+|.++++.+.+....... ...+.+ .++.++++. .++.++.+|..+
T Consensus 221 ~~d~~i~i~d~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~--~d~~i~i~~~~~ 274 (372)
T 1k8k_C 221 SHDSTVCLADADKKMAVATLASETLP--LLAVTFITESSLVAAG--HDCFPVLFTYDS 274 (372)
T ss_dssp ETTTEEEEEEGGGTTEEEEEECSSCC--EEEEEEEETTEEEEEE--TTSSCEEEEEET
T ss_pred eCCCEEEEEECCCCceeEEEccCCCC--eEEEEEecCCCEEEEE--eCCeEEEEEccC
Confidence 34588999999999999888755421 122222 355555544 388888888877
No 117
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.26 E-value=9.2e-05 Score=69.81 Aligned_cols=113 Identities=10% Similarity=-0.046 Sum_probs=65.6
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCC-CCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLG-GGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~-g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+..|+++..++.+..+|..+++............. ......... ....+++. ..++.|..+
T Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~i~v~ 319 (408)
T 4a11_B 257 GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFV-----------------PYGSTIAVY 319 (408)
T ss_dssp SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEE-----------------EETTEEEEE
T ss_pred CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEE-----------------ecCCEEEEE
Confidence 46788888899999999999987655432211000 111111111 23334443 234789999
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEe
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYD 338 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~ 338 (382)
|..+++.+.+....... ...+.+ ++.+++.++ .+|.|...|.++++.+-..+
T Consensus 320 d~~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~s~~--~dg~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 320 TVYSGEQITMLKGHYKT--VDCCVFQSNFQELYSGS--RDCNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp ETTTCCEEEEECCCSSC--EEEEEEETTTTEEEEEE--TTSCEEEEEECC--------
T ss_pred ECcCCcceeeeccCCCe--EEEEEEcCCCCEEEEEC--CCCeEEEEeCCCCCccCCCC
Confidence 99999999888754422 122223 245666666 48999999999998776544
No 118
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.25 E-value=0.00025 Score=67.70 Aligned_cols=192 Identities=11% Similarity=0.106 Sum_probs=105.9
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCC-----cCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEY-----AGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTT 128 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~ 128 (382)
++.+..+|..+|+.+.+..........+... .....+..+..+.+++..++.+..
T Consensus 84 ~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~-------------------- 143 (393)
T 1erj_A 84 NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE-------------------- 143 (393)
T ss_dssp BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEET--------------------
T ss_pred CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcC--------------------
Confidence 5678888999999887764321110000000 001111123456666666666554
Q ss_pred CCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEE
Q 040693 129 PTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIV 208 (382)
Q Consensus 129 ~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v 208 (382)
++.|..+|..+++.+-..+.....+. -..+..+ +..+
T Consensus 144 -------------d~~i~iwd~~~~~~~~~~~~h~~~v~---------------------------~~~~~p~---~~~l 180 (393)
T 1erj_A 144 -------------DRLIRIWDIENRKIVMILQGHEQDIY---------------------------SLDYFPS---GDKL 180 (393)
T ss_dssp -------------TSCEEEEETTTTEEEEEECCCSSCEE---------------------------EEEECTT---SSEE
T ss_pred -------------CCeEEEEECCCCcEEEEEccCCCCEE---------------------------EEEEcCC---CCEE
Confidence 38899999999988766543322111 1111222 4678
Q ss_pred EEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee---eCCeEEEEecCccccccccCCCCCCCCCceEEEEECC
Q 040693 209 VAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT---DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS 285 (382)
Q Consensus 209 ~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~ 285 (382)
+++..|+.+..+|..+|+....+.... ....... ++..+..+ ..++.|..+|.+
T Consensus 181 ~s~s~d~~v~iwd~~~~~~~~~~~~~~------~v~~~~~~~~~~~~l~~~-----------------s~d~~v~iwd~~ 237 (393)
T 1erj_A 181 VSGSGDRTVRIWDLRTGQCSLTLSIED------GVTTVAVSPGDGKYIAAG-----------------SLDRAVRVWDSE 237 (393)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSS------CEEEEEECSTTCCEEEEE-----------------ETTSCEEEEETT
T ss_pred EEecCCCcEEEEECCCCeeEEEEEcCC------CcEEEEEECCCCCEEEEE-----------------cCCCcEEEEECC
Confidence 888899999999999999887776432 1111111 33444444 345889999999
Q ss_pred CCcEEeeecCCCCC-----CCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcE
Q 040693 286 NGNVLWSTADPSNG-----TAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKI 333 (382)
Q Consensus 286 tG~~~W~~~~~~~~-----~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~i 333 (382)
+|+.+-+....... .....+.+ ++..++.++ .++.|...|..+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s--~d~~v~~wd~~~~~~ 290 (393)
T 1erj_A 238 TGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS--LDRSVKLWNLQNANN 290 (393)
T ss_dssp TCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE--TTSEEEEEEC-----
T ss_pred CCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe--CCCEEEEEECCCCCC
Confidence 99987766422110 01112223 245666666 489999999876543
No 119
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.25 E-value=0.00023 Score=69.13 Aligned_cols=110 Identities=16% Similarity=0.083 Sum_probs=69.4
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeee----eeccCCCCCCCCcccceee--e---CCeEEEEecCccccccccCCCCCCCC
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIW----SMEAGPGGLGGGAMWGAAT--D---ERRIYTNIANSQHKNFNLKPSKNSTI 275 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W----~~~~~~~~~~g~~~~~~~~--~---~~~v~~~~~~~~~~~~~~~~~~~~~~ 275 (382)
+..|+++..++.++.+|..+++..- .+... ........+ + +..++.+ ..
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~sp~~~~~~~l~s~-----------------~~ 218 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGH-----VSMLTDVHLIKDSDGHQFIITS-----------------DR 218 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEEC-----SSCEEEEEEEECTTSCEEEEEE-----------------ET
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceeeecc-----cCceEEEEEcCCCCCCcEEEEE-----------------cC
Confidence 3678888889999999998887543 22111 111222222 3 3344444 34
Q ss_pred CceEEEEECCCCcEEeeecCCCCCCCCcceEE-eCCEEEEeeecCCCcEEEEeCCCCcEeEEEec
Q 040693 276 AGGWVAMDASNGNVLWSTADPSNGTAPGPVTV-ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDT 339 (382)
Q Consensus 276 ~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~ 339 (382)
++.|..+|..+++.+.+....... ....+.+ ++.+++.++ .++.|..+|..+|+.+-.++.
T Consensus 219 d~~i~vwd~~~~~~~~~~~~~h~~-~v~~~~~sd~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~ 280 (450)
T 2vdu_B 219 DEHIKISHYPQCFIVDKWLFGHKH-FVSSICCGKDYLLLSAG--GDDKIFAWDWKTGKNLSTFDY 280 (450)
T ss_dssp TSCEEEEEESCTTCEEEECCCCSS-CEEEEEECSTTEEEEEE--SSSEEEEEETTTCCEEEEEEC
T ss_pred CCcEEEEECCCCceeeeeecCCCC-ceEEEEECCCCEEEEEe--CCCeEEEEECCCCcEeeeecc
Confidence 578999999999887664322111 1122222 456777776 499999999999999888864
No 120
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.23 E-value=0.00048 Score=62.03 Aligned_cols=140 Identities=11% Similarity=0.083 Sum_probs=77.7
Q ss_pred EEEEE-ccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEEC
Q 040693 207 IVVAV-QKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDA 284 (382)
Q Consensus 207 ~v~~~-~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~ 284 (382)
.+++. ..++.++.+|. +|+.... .... .......... .++.+|++.. ..+.|..+|+
T Consensus 153 ~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~---~~~~~~~i~~~~~g~l~v~~~----------------~~~~i~~~~~ 211 (299)
T 2z2n_A 153 ALWFTENQNNAIGRITE-SGDITEF-KIPT---PASGPVGITKGNDDALWFVEI----------------IGNKIGRITT 211 (299)
T ss_dssp CEEEEETTTTEEEEECT-TCCEEEE-ECSS---TTCCEEEEEECTTSSEEEEET----------------TTTEEEEECT
T ss_pred CEEEEeCCCCEEEEEcC-CCcEEEe-eCCC---CCCcceeEEECCCCCEEEEcc----------------CCceEEEECC
Confidence 45554 45678999999 7877643 2211 1112223333 3467888632 2467999999
Q ss_pred CCCcEEeeecCCCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC--ceecceEEeCCEEEEEeCce
Q 040693 285 SNGNVLWSTADPSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA--TIYGGASVSNGCIYMGNGYK 361 (382)
Q Consensus 285 ~tG~~~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~--~~~~~p~~~~g~lyv~~~~g 361 (382)
+|+..- +..+........+.++ ++.+|+++. ..+.|+.+|+ +|++. .+..+. ....+.++.+++||+++..+
T Consensus 212 -~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~-~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~~~g~l~v~~~~~ 286 (299)
T 2z2n_A 212 -SGEITE-FKIPTPNARPHAITAGAGIDLWFTEW-GANKIGRLTS-NNIIE-EYPIQIKSAEPHGICFDGETIWFAMECD 286 (299)
T ss_dssp -TCCEEE-EECSSTTCCEEEEEECSTTCEEEEET-TTTEEEEEET-TTEEE-EEECSSSSCCEEEEEECSSCEEEEETTT
T ss_pred -CCcEEE-EECCCCCCCceeEEECCCCCEEEecc-CCceEEEECC-CCceE-EEeCCCCCCccceEEecCCCEEEEecCC
Confidence 887542 3232211112234444 567888863 3688999998 56543 443332 22223333789999997654
Q ss_pred eEeecCCccCCCCC
Q 040693 362 VTVGFGNKNFTSGT 375 (382)
Q Consensus 362 ~~~~~~~~~~~~g~ 375 (382)
. ++.+++++++
T Consensus 287 ~---l~~~~~~~~~ 297 (299)
T 2z2n_A 287 K---IGKLTLIKDN 297 (299)
T ss_dssp E---EEEEEEC---
T ss_pred c---EEEEEcCccc
Confidence 4 3456666654
No 121
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.22 E-value=0.00013 Score=67.44 Aligned_cols=226 Identities=12% Similarity=0.097 Sum_probs=128.2
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCC---CCeEEEEcCCCCCCCcchhhcccccCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPI---RNHVYIATGNLYSVPLHIRQCQEENNQTTPT 130 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (382)
++.|..+|.++++..-........ .+ ....+.++ +..++.+..+
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~----------~v--~~~~~~~~~~~~~~l~~~~~d--------------------- 89 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAK----------PI--KCGTFGATSLQQRYLATGDFG--------------------- 89 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESS----------CE--EEEECTTCCTTTCCEEEEETT---------------------
T ss_pred CcEEEEEeCCCCcccceeeecccC----------cE--EEEEEcCCCCCCceEEEecCC---------------------
Confidence 689999999999876554432110 00 12344444 3566665543
Q ss_pred CCCCCCCCCCCcceEEEEECCCCc-EEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEE
Q 040693 131 SPDKCIEPENHSNSLLALDLDTGK-IVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVV 209 (382)
Q Consensus 131 ~~~~~~~~~~~~g~v~ald~~tG~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~ 209 (382)
+.|..+|..+++ .+..+......+..... .|.+ .+. ..+..++
T Consensus 90 ------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~--------------------~~~~-~~s---~~~~~l~ 133 (357)
T 3i2n_A 90 ------------GNLHIWNLEAPEMPVYSVKGHKEIINAIDG--------------------IGGL-GIG---EGAPEIV 133 (357)
T ss_dssp ------------SCEEEECTTSCSSCSEEECCCSSCEEEEEE--------------------ESGG-GCC----CCCEEE
T ss_pred ------------CeEEEEeCCCCCccEEEEEecccceEEEee--------------------cccc-ccC---CCccEEE
Confidence 889999999988 66665533221110000 0000 000 1145788
Q ss_pred EEccCcEEEEEeCCCCC-eeeeeccCCCCCCCCccccee------eeCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 210 AVQKSGFAWALDRDSGS-LIWSMEAGPGGLGGGAMWGAA------TDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 210 ~~~~~g~l~ald~~tG~-~~W~~~~~~~~~~g~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
++..++.+..+|..+++ .+..+...... .....+... .++..++++ ..++.|..+
T Consensus 134 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~l~~~-----------------~~d~~i~i~ 195 (357)
T 3i2n_A 134 TGSRDGTVKVWDPRQKDDPVANMEPVQGE-NKRDCWTVAFGNAYNQEERVVCAG-----------------YDNGDIKLF 195 (357)
T ss_dssp EEETTSCEEEECTTSCSSCSEEECCCTTS-CCCCEEEEEEECCCC-CCCEEEEE-----------------ETTSEEEEE
T ss_pred EEeCCCeEEEEeCCCCCCcceeccccCCC-CCCceEEEEEEeccCCCCCEEEEE-----------------ccCCeEEEE
Confidence 88899999999999987 55555432210 011222221 145555555 345889999
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEE-----eCCEEEEeeecCCCcEEEEeCCCCcEeEEEe-----cCCceecceEE-eC
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTV-----ANGVLFGGSTYRQGPIYAMDVKTGKILWSYD-----TGATIYGGASV-SN 351 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~-----~~~~~~~~p~~-~~ 351 (382)
|.++++..+....... ...+.+ .++.+++++ .++.|..+|..+++.+..+. ........... .+
T Consensus 196 d~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 270 (357)
T 3i2n_A 196 DLRNMALRWETNIKNG---VCSLEFDRKDISMNKLVATS--LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQ 270 (357)
T ss_dssp ETTTTEEEEEEECSSC---EEEEEESCSSSSCCEEEEEE--STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETT
T ss_pred ECccCceeeecCCCCc---eEEEEcCCCCCCCCEEEEEC--CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCC
Confidence 9999999887665432 222333 346777776 48999999998887766554 22222333333 33
Q ss_pred CE-EEEEeCceeEeecCCccC
Q 040693 352 GC-IYMGNGYKVTVGFGNKNF 371 (382)
Q Consensus 352 g~-lyv~~~~g~~~~~~~~~~ 371 (382)
++ ++++.+....+.+|.+..
T Consensus 271 ~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 271 NRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEEEEETTSEEEEEEEEC
T ss_pred CCcEEEEEeCCCcEEEeecCC
Confidence 44 444433333466776654
No 122
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.20 E-value=0.00033 Score=64.35 Aligned_cols=149 Identities=12% Similarity=0.042 Sum_probs=81.4
Q ss_pred cEEEEEc-cCcEEEEEeCCC-CCeeeee----ccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCc
Q 040693 206 DIVVAVQ-KSGFAWALDRDS-GSLIWSM----EAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAG 277 (382)
Q Consensus 206 ~~v~~~~-~~g~l~ald~~t-G~~~W~~----~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g 277 (382)
..+++.. .++.+..+|..+ |++.-.. .... +.......+ ++..+|+.. ...+
T Consensus 141 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~pdg~~l~~~~----------------~~~~ 200 (343)
T 1ri6_A 141 RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE----GAGPRHMVFHPNEQYAYCVN----------------ELNS 200 (343)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECST----TCCEEEEEECTTSSEEEEEE----------------TTTT
T ss_pred CEEEEecCCCCEEEEEEecCCCceeeecccccccCC----CCCcceEEECCCCCEEEEEe----------------CCCC
Confidence 4455554 788999999987 7654322 2111 111111222 556677653 2347
Q ss_pred eEEEEEC--CCCcEEeeec---CCCC---CCCCcceEEe--CCEEEEeeecCCCcEEEEeCC--CCc--EeEEEecCCce
Q 040693 278 GWVAMDA--SNGNVLWSTA---DPSN---GTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVK--TGK--ILWSYDTGATI 343 (382)
Q Consensus 278 ~v~a~d~--~tG~~~W~~~---~~~~---~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~--tG~--ilw~~~~~~~~ 343 (382)
.+..+|. .+|+...... .+.. ......+.+. +..+|+... .++.|..+|.+ +++ .+-..+....
T Consensus 201 ~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~-~~~~i~v~d~~~~~~~~~~~~~~~~~~~- 278 (343)
T 1ri6_A 201 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR-TASLITVFSVSEDGSVLSKEGFQPTETQ- 278 (343)
T ss_dssp EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET-TTTEEEEEEECTTSCCEEEEEEEECSSS-
T ss_pred EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec-CCCEEEEEEEcCCCCceEEeeeecCCCc-
Confidence 7888888 4565533222 1111 0011123343 347776652 47889999987 443 3444444333
Q ss_pred ecceEE--eCCEEEEEeCceeEeecCCccCCCCCe
Q 040693 344 YGGASV--SNGCIYMGNGYKVTVGFGNKNFTSGTS 376 (382)
Q Consensus 344 ~~~p~~--~~g~lyv~~~~g~~~~~~~~~~~~g~~ 376 (382)
.....+ .+..||+++.....+.+|.++..+|+.
T Consensus 279 ~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 279 PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred cceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 233344 345688888655567789899888854
No 123
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.20 E-value=8.1e-05 Score=68.06 Aligned_cols=84 Identities=7% Similarity=-0.025 Sum_probs=50.3
Q ss_pred CceEEEEECC-CCcEEee---ecCCCCC-CCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE
Q 040693 276 AGGWVAMDAS-NGNVLWS---TADPSNG-TAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV 349 (382)
Q Consensus 276 ~g~v~a~d~~-tG~~~W~---~~~~~~~-~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~ 349 (382)
.+.|..+|.+ +|+..-. ...+... .....+.++ ++.+|+++. .++.|+.+|+++|+.+..+..+.....+.++
T Consensus 197 ~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~-~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~ 275 (314)
T 1pjx_A 197 TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW-GSSHIEVFGPDGGQPKMRIRCPFEKPSNLHF 275 (314)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE-TTTEEEEECTTCBSCSEEEECSSSCEEEEEE
T ss_pred CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc-CCCEEEEEcCCCCcEeEEEeCCCCCceeEEE
Confidence 4678999876 5653211 1122110 011223344 577888764 3688999999989988877766433344444
Q ss_pred -eCCE-EEEEeCc
Q 040693 350 -SNGC-IYMGNGY 360 (382)
Q Consensus 350 -~~g~-lyv~~~~ 360 (382)
.+++ ||+++..
T Consensus 276 ~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 276 KPQTKTIFVTEHE 288 (314)
T ss_dssp CTTSSEEEEEETT
T ss_pred CCCCCEEEEEeCC
Confidence 3455 9998865
No 124
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=98.19 E-value=0.00011 Score=72.48 Aligned_cols=113 Identities=19% Similarity=0.240 Sum_probs=64.8
Q ss_pred ceEEEEECCCCc--EEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEE
Q 040693 143 NSLLALDLDTGK--IVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWAL 220 (382)
Q Consensus 143 g~v~ald~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~al 220 (382)
..|.|+|.++|+ ++|++.......-.+.+. -.-.|.+.++..|| .+.|+.+.. ++
T Consensus 292 ~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gq----------------g~h~~~vaDVDgDG--~dEIv~Gs~-----~i 348 (591)
T 2zux_A 292 TMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQ----------------GNHNLSIADVDGDG--KDEIIFGSM-----AV 348 (591)
T ss_dssp CEEEEEEEETTEEEEEEEEETTSTTCGGGSSC----------------CCSCCEEECCSSSS--SCEEEETTE-----EE
T ss_pred eEEEEEECCCCceEEEEEecCCCCCccccccc----------------CCCCCeeEeCCCCC--CceEEEeee-----EE
Confidence 569999998886 599998764311111110 11478888888888 666776653 56
Q ss_pred eCCCCCeeeeeccCCCCCCCCcccceeee----CCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCC
Q 040693 221 DRDSGSLIWSMEAGPGGLGGGAMWGAATD----ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADP 296 (382)
Q Consensus 221 d~~tG~~~W~~~~~~~~~~g~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~ 296 (382)
| .+|+.+|+....- +......-.+ +-.+|....+ . .........|++||+++|+....
T Consensus 349 D-~dG~~L~st~~gH----GDa~hv~dldP~r~GlEv~~~~E~-~------------~~~~G~~~~dA~tG~vlw~~~~~ 410 (591)
T 2zux_A 349 D-HDGKGMYSTGLGH----GDALHTGDLDPGRPGLEVFQVHED-K------------NAKYGLSFRDAATGKILWGVYAG 410 (591)
T ss_dssp C-TTSCEEEECSCCC----CSCEEEECCCTTSSSCEEEEECCC-T------------TSSCSEEEEETTTCCEEEEECCS
T ss_pred C-CCCCEeeeCCCCC----CCeeEEeecCCCCCCcEEEEEecC-C------------CCCCccEEEECCCCcEEEEcCCC
Confidence 7 5699999987531 1111111111 1123333111 0 11113444799999999998753
No 125
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.18 E-value=0.00026 Score=65.05 Aligned_cols=219 Identities=12% Similarity=0.032 Sum_probs=120.5
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
|+.|..+|..+++......... +.++........+.+++..++.+..+
T Consensus 60 D~~i~vWd~~~~~~~~~~~~~~--------l~~h~~~V~~~~~s~dg~~l~s~~~d------------------------ 107 (340)
T 4aow_A 60 DKTIIMWKLTRDETNYGIPQRA--------LRGHSHFVSDVVISSDGQFALSGSWD------------------------ 107 (340)
T ss_dssp TSCEEEEEECCSSSCSEEEEEE--------ECCCSSCEEEEEECTTSSEEEEEETT------------------------
T ss_pred CCeEEEEECCCCCcccceeeEE--------EeCCCCCEEEEEECCCCCEEEEEccc------------------------
Confidence 8889999887766544332210 00111111234566666666665543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..++...++............ ....... .+..++.+..
T Consensus 108 ---------~~i~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~---~~~~l~s~s~ 148 (340)
T 4aow_A 108 ---------GTLRLWDLTTGTTTRRFVGHTKDV---------------------------LSVAFSS---DNRQIVSGSR 148 (340)
T ss_dssp ---------SEEEEEETTTTEEEEEEECCSSCE---------------------------EEEEECT---TSSCEEEEET
T ss_pred ---------ccceEEeecccceeeeecCCCCce---------------------------eEEEEee---cCccceeecC
Confidence 788999988887777665543311 1111111 1456777888
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--e-CCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--D-ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL 290 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~-~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~ 290 (382)
|+.+..+|.......-...... ......... + ...++++. ..++.|..+|.++++.+
T Consensus 149 d~~~~~~d~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~s~----------------~~d~~i~i~d~~~~~~~ 208 (340)
T 4aow_A 149 DKTIKLWNTLGVCKYTVQDESH----SEWVSCVRFSPNSSNPIIVSC----------------GWDKLVKVWNLANCKLK 208 (340)
T ss_dssp TSCEEEECTTSCEEEEECSSSC----SSCEEEEEECSCSSSCEEEEE----------------ETTSCEEEEETTTTEEE
T ss_pred CCeEEEEEeCCCceEEEEeccc----cCcccceEEccCCCCcEEEEE----------------cCCCEEEEEECCCCcee
Confidence 8989988877554332222111 001111111 1 22233321 23577999999999988
Q ss_pred eeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEeCCEEEEEeCceeEeecCC
Q 040693 291 WSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVSNGCIYMGNGYKVTVGFGN 368 (382)
Q Consensus 291 W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~~g~lyv~~~~g~~~~~~~ 368 (382)
.+....... ...+.+ ++.+++.++ .++.|...|..+++.+..++....+..-....++.+++++.++. +.+|.
T Consensus 209 ~~~~~h~~~--v~~~~~s~~~~~l~s~s--~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~-i~iwd 283 (340)
T 4aow_A 209 TNHIGHTGY--LNTVTVSPDGSLCASGG--KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPS-IKIWD 283 (340)
T ss_dssp EEECCCSSC--EEEEEECTTSSEEEEEE--TTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTE-EEEEE
T ss_pred eEecCCCCc--EEEEEECCCCCEEEEEe--CCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCE-EEEEE
Confidence 777644321 122233 245666666 48999999999999998887655433222223555555555544 34443
No 126
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.17 E-value=9.3e-05 Score=68.66 Aligned_cols=187 Identities=7% Similarity=-0.035 Sum_probs=111.6
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCC----CCeEEEEcCCCCCCCcchhhcccccCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPI----RNHVYIATGNLYSVPLHIRQCQEENNQTTP 129 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~ 129 (382)
++.|..+|..+++.+........... ...+ ....+.++ +.+++.+..
T Consensus 43 ~~~v~vw~~~~~~~~~~~~~~~~~~~------~~~v--~~~~~~~~~~~~~~~l~~~~~--------------------- 93 (366)
T 3k26_A 43 SNRVTLYECHSQGEIRLLQSYVDADA------DENF--YTCAWTYDSNTSHPLLAVAGS--------------------- 93 (366)
T ss_dssp TTEEEEEEECGGGCEEEEEEEECSCT------TCCE--EEEEEEECTTTCCEEEEEEET---------------------
T ss_pred CCEEEEEEcCCCcEEEeeeeccccCC------CCcE--EEEEeccCCCCCCCEEEEecC---------------------
Confidence 77899999999998877654221100 0111 12334433 234555544
Q ss_pred CCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEE
Q 040693 130 TSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVV 209 (382)
Q Consensus 130 ~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~ 209 (382)
++.|..+|..+++.+.++......+. -...... .+..++
T Consensus 94 ------------dg~i~v~d~~~~~~~~~~~~~~~~i~---------------------------~~~~~~~--~~~~l~ 132 (366)
T 3k26_A 94 ------------RGIIRIINPITMQCIKHYVGHGNAIN---------------------------ELKFHPR--DPNLLL 132 (366)
T ss_dssp ------------TCEEEEECTTTCCEEEEEESCCSCEE---------------------------EEEECSS--CTTEEE
T ss_pred ------------CCEEEEEEchhceEeeeecCCCCcEE---------------------------EEEECCC--CCCEEE
Confidence 38999999999999988764332111 1111111 146788
Q ss_pred EEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCC
Q 040693 210 AVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNG 287 (382)
Q Consensus 210 ~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG 287 (382)
++..++.+..+|..+++.+..+..-. ........... ++..++.+ ..++.|..+|.+++
T Consensus 133 s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~-----------------~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 133 SVSKDHALRLWNIQTDTLVAIFGGVE--GHRDEVLSADYDLLGEKIMSC-----------------GMDHSLKLWRINSK 193 (366)
T ss_dssp EEETTSCEEEEETTTTEEEEEECSTT--SCSSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEESCSH
T ss_pred EEeCCCeEEEEEeecCeEEEEecccc--cccCceeEEEECCCCCEEEEe-----------------cCCCCEEEEECCCC
Confidence 88899999999999999888773211 01112222222 45556555 34578999999988
Q ss_pred cEEeeecC----------------------------CCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcE
Q 040693 288 NVLWSTAD----------------------------PSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKI 333 (382)
Q Consensus 288 ~~~W~~~~----------------------------~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~i 333 (382)
+.+-.... .. .....+.+.+++++.++. ++.|..+|..+++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~l~~~~~--d~~i~~wd~~~~~~ 263 (366)
T 3k26_A 194 RMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHR--NYVDCVRWLGDLILSKSC--ENAIVCWKPGKMED 263 (366)
T ss_dssp HHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCS--SCCCEEEEETTEEEEECS--SSEEEEEEESSTTC
T ss_pred ccccccceeEEecCCCCcccccceeeccCccccccCCc--ceEEEEEEcCCEEEEEec--CCEEEEEeCCCccc
Confidence 75533221 11 112233344777777764 89999999887754
No 127
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.17 E-value=0.00015 Score=68.24 Aligned_cols=178 Identities=14% Similarity=0.091 Sum_probs=99.6
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.++|+.+-++.-.. ..+ ....+.+++..+++..+.
T Consensus 148 d~~i~iwd~~~~~~~~~~~~h~-----------~~V--~~~~~~~~~~~~l~s~s~------------------------ 190 (344)
T 4gqb_B 148 DICIKVWDLAQQVVLSSYRAHA-----------AQV--TCVAASPHKDSVFLSCSE------------------------ 190 (344)
T ss_dssp TSCEEEEETTTTEEEEEECCCS-----------SCE--EEEEECSSCTTEEEEEET------------------------
T ss_pred CCeEEEEECCCCcEEEEEcCcC-----------Cce--EEEEecCCCCCceeeecc------------------------
Confidence 8899999999999987764311 011 123444554444443322
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
++.|..+|..+++.+-++...... ....-.....++ ..+++++..
T Consensus 191 --------D~~v~iwd~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~p~~--~~~l~sg~~ 235 (344)
T 4gqb_B 191 --------DNRILLWDTRCPKPASQIGCSAPG-------------------------YLPTSLAWHPQQ--SEVFVFGDE 235 (344)
T ss_dssp --------TSCEEEEETTSSSCEEECC----C-------------------------CCEEEEEECSSC--TTEEEEEET
T ss_pred --------ccccccccccccceeeeeecceee-------------------------ccceeeeecCCC--CcceEEecc
Confidence 488999999999988776543321 011112222222 467778889
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCe-EEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERR-IYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL 290 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~-v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~ 290 (382)
|+.+..+|..+++.+..+..-. ........ ++.. |..+ ..++.|..+|.++++..
T Consensus 236 dg~v~~wd~~~~~~~~~~~~h~-----~~v~~v~fsp~g~~~lasg-----------------s~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 236 NGTVSLVDTKSTSCVLSSAVHS-----QCVTGLVFSPHSVPFLASL-----------------SEDCSLAVLDSSLSELF 293 (344)
T ss_dssp TSEEEEEESCC--CCEEEECCS-----SCEEEEEECSSSSCCEEEE-----------------ETTSCEEEECTTCCEEE
T ss_pred CCcEEEEECCCCcEEEEEcCCC-----CCEEEEEEccCCCeEEEEE-----------------eCCCeEEEEECCCCcEE
Confidence 9999999999999988876321 12222222 3333 3333 34588999999999865
Q ss_pred eeecCCCCCCCCcceEE--eCCEEEE-eeecCCCcEEEEeCCC
Q 040693 291 WSTADPSNGTAPGPVTV--ANGVLFG-GSTYRQGPIYAMDVKT 330 (382)
Q Consensus 291 W~~~~~~~~~~~~~~~~--~~~~v~~-~~~~~~g~l~~ld~~t 330 (382)
- ...... ....+.+ ++..+++ ++ .++.|...+..+
T Consensus 294 ~-~~~H~~--~V~~v~~sp~~~~llas~s--~D~~v~~w~v~~ 331 (344)
T 4gqb_B 294 R-SQAHRD--FVRDATWSPLNHSLLTTVG--WDHQVVHHVVPT 331 (344)
T ss_dssp E-ECCCSS--CEEEEEECSSSTTEEEEEE--TTSCEEEEECCC
T ss_pred E-EcCCCC--CEEEEEEeCCCCeEEEEEc--CCCeEEEEECCC
Confidence 3 322211 1122223 2333443 34 477777666654
No 128
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.17 E-value=0.00071 Score=63.58 Aligned_cols=146 Identities=12% Similarity=0.146 Sum_probs=87.1
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee----eCCeEEEEecCccccccccCCCCCCCCCceEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT----DERRIYTNIANSQHKNFNLKPSKNSTIAGGWV 280 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~ 280 (382)
+..|++++.|+.+..+|.++|+.+-.+.... ........ ++..++.+ ..++.|.
T Consensus 166 ~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~-----~~v~~~~~~~~~~g~~l~sg-----------------s~Dg~v~ 223 (354)
T 2pbi_B 166 DMQILTASGDGTCALWDVESGQLLQSFHGHG-----ADVLCLDLAPSETGNTFVSG-----------------GCDKKAM 223 (354)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCS-----SCEEEEEECCCSSCCEEEEE-----------------ETTSCEE
T ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEcCCC-----CCeEEEEEEeCCCCCEEEEE-----------------eCCCeEE
Confidence 4578889999999999999999887765321 11111111 23455555 3458899
Q ss_pred EEECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCce--ecceEE-eCCE-E
Q 040693 281 AMDASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATI--YGGASV-SNGC-I 354 (382)
Q Consensus 281 a~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~--~~~p~~-~~g~-l 354 (382)
.+|.++|+.+-....... ....+.+ ++..++.++ .++.|..+|..+++.+-.+...... ..+..+ .+++ |
T Consensus 224 ~wd~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~s~s--~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l 299 (354)
T 2pbi_B 224 VWDMRSGQCVQAFETHES--DVNSVRYYPSGDAFASGS--DDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLL 299 (354)
T ss_dssp EEETTTCCEEEEECCCSS--CEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred EEECCCCcEEEEecCCCC--CeEEEEEeCCCCEEEEEe--CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEE
Confidence 999999998877654432 1222333 245666666 4999999999988876655433211 112222 2344 4
Q ss_pred EEEeCceeEeecCCccCCCCCeEEE
Q 040693 355 YMGNGYKVTVGFGNKNFTSGTSLYA 379 (382)
Q Consensus 355 yv~~~~g~~~~~~~~~~~~g~~l~~ 379 (382)
++++.++. +.+|.+ .+|+.+-.
T Consensus 300 ~~g~~d~~-i~vwd~--~~~~~~~~ 321 (354)
T 2pbi_B 300 FAGYNDYT-INVWDV--LKGSRVSI 321 (354)
T ss_dssp EEEETTSC-EEEEET--TTCSEEEE
T ss_pred EEEECCCc-EEEEEC--CCCceEEE
Confidence 44555544 455543 44665543
No 129
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.16 E-value=0.00055 Score=64.06 Aligned_cols=101 Identities=9% Similarity=0.083 Sum_probs=59.3
Q ss_pred CceEEEEECCCCcEEeeecCCCCC---CCCcceEE--eCCEEEEeeecC-CCcEEEEeC--CCCcE--eEEEecCCceec
Q 040693 276 AGGWVAMDASNGNVLWSTADPSNG---TAPGPVTV--ANGVLFGGSTYR-QGPIYAMDV--KTGKI--LWSYDTGATIYG 345 (382)
Q Consensus 276 ~g~v~a~d~~tG~~~W~~~~~~~~---~~~~~~~~--~~~~v~~~~~~~-~g~l~~ld~--~tG~i--lw~~~~~~~~~~ 345 (382)
.+.|..+|..+|+........... .....+.+ ++..+|+... . .+.|..++. ++|+. +..... +....
T Consensus 232 ~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~-~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~ 309 (361)
T 3scy_A 232 GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR-LKADGVAIFKVDETNGTLTKVGYQLT-GIHPR 309 (361)
T ss_dssp TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC-SSSCEEEEEEECTTTCCEEEEEEEEC-SSCCC
T ss_pred CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC-CCCCEEEEEEEcCCCCcEEEeeEecC-CCCCc
Confidence 577999999988764443322110 01112333 3457887764 2 366666555 57774 444444 22222
Q ss_pred ceEE--eCCEEEEEeCceeEeecCCccCCCCCeEE
Q 040693 346 GASV--SNGCIYMGNGYKVTVGFGNKNFTSGTSLY 378 (382)
Q Consensus 346 ~p~~--~~g~lyv~~~~g~~~~~~~~~~~~g~~l~ 378 (382)
...+ .+..||+++.....+.+|.+|..+|++..
T Consensus 310 ~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 310 NFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp EEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred eEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 3333 34568888866666788999999998754
No 130
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=98.14 E-value=0.00021 Score=70.86 Aligned_cols=114 Identities=20% Similarity=0.210 Sum_probs=66.0
Q ss_pred ceEEEEECCCC--cEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEE
Q 040693 143 NSLLALDLDTG--KIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWAL 220 (382)
Q Consensus 143 g~v~ald~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~al 220 (382)
..|.|+|.++| +.+|++.........+.+. -.-.+.+.++..+| .+.|+.+. .++
T Consensus 296 ~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gq----------------g~H~~svaDVDGDG--~dEIv~Gs-----~~i 352 (620)
T 2zuy_A 296 TVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQ----------------GNHSLSVADVDGDG--KDEIIYGA-----MAV 352 (620)
T ss_dssp CEEEEEEEETTEEEEEEEEETTSTTCGGGTTC----------------CCSSCEEECCSSSS--SCEEEETT-----EEE
T ss_pred eeEEEEEccCCceeeeeEecCCCCcccccccc----------------cCcCceEEecCCCC--ceeEEEee-----eEE
Confidence 56899999888 4799998753211111110 11467888887777 66777765 367
Q ss_pred eCCCCCeeeeeccCCCCCCCCcccceee---eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCC
Q 040693 221 DRDSGSLIWSMEAGPGGLGGGAMWGAAT---DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADP 296 (382)
Q Consensus 221 d~~tG~~~W~~~~~~~~~~g~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~ 296 (382)
| .+|+.+|+.... .|......-. ..++.++...+.. .........|++||+++|+....
T Consensus 353 D-~dG~~L~st~~g----HGDa~hv~d~dP~rpGlev~~~~E~~------------~~~~G~~~~DA~tG~vlw~~~~~ 414 (620)
T 2zuy_A 353 D-HDGTGLYSTGLG----HGDAMHVGDLDPSRKGLEVFQVHEDA------------TKPYGLSLRDAGTGEILWGVHAG 414 (620)
T ss_dssp C-TTSSEEEECSCC----CCSCEEEECSCTTSSSCEEEEECCCT------------TSSCSEEEEETTTCCEEEEECCS
T ss_pred C-CCCCEEeecCCC----CCceeEEEecCCCCCCCEEEEEecCC------------CCCCceEEEECCCCcEEEEecCc
Confidence 7 679999998752 1111111101 1233332222210 11224567899999999998753
No 131
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.14 E-value=0.00014 Score=69.01 Aligned_cols=150 Identities=9% Similarity=0.070 Sum_probs=88.8
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCC-CCcccceee--eCC-eEEEEecCccccccccCCCCCCCCCceEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLG-GGAMWGAAT--DER-RIYTNIANSQHKNFNLKPSKNSTIAGGWV 280 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~-g~~~~~~~~--~~~-~v~~~~~~~~~~~~~~~~~~~~~~~g~v~ 280 (382)
...++++..++.+..+|..+++.+..+........ ......... ++. .++....+ ...+.|.
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------------~~~~~i~ 243 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS--------------DNDPSIL 243 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC--------------SSSCCCC
T ss_pred CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECC--------------CCCceEE
Confidence 46788889999999999999999888775421000 112222222 332 44444221 0112799
Q ss_pred EEECCCC-cEEeeec-CCCCCCCCcceEE---eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEe-CC-E
Q 040693 281 AMDASNG-NVLWSTA-DPSNGTAPGPVTV---ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVS-NG-C 353 (382)
Q Consensus 281 a~d~~tG-~~~W~~~-~~~~~~~~~~~~~---~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~-~g-~ 353 (382)
.+|.+++ +++.... .... ....+.+ ++.+++.++ .++.|..+|.++++.+.++............. ++ +
T Consensus 244 ~~d~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~~l~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 319 (416)
T 2pm9_A 244 IWDLRNANTPLQTLNQGHQK--GILSLDWCHQDEHLLLSSG--RDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPD 319 (416)
T ss_dssp EEETTSTTSCSBCCCSCCSS--CEEEEEECSSCSSCEEEEE--SSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTT
T ss_pred EEeCCCCCCCcEEeecCccC--ceeEEEeCCCCCCeEEEEe--CCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCC
Confidence 9999987 4444443 2211 1122223 335666666 48999999999999998887654444444443 34 5
Q ss_pred EEEEeCceeEeecCCccCC
Q 040693 354 IYMGNGYKVTVGFGNKNFT 372 (382)
Q Consensus 354 lyv~~~~g~~~~~~~~~~~ 372 (382)
++++.+....+.+|.+...
T Consensus 320 ~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 320 LFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EEEECCSSSEEEEEESCCC
T ss_pred EEEEEecCCcEEEEEccCC
Confidence 6665554455677776653
No 132
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.13 E-value=0.00027 Score=65.08 Aligned_cols=148 Identities=8% Similarity=0.033 Sum_probs=85.8
Q ss_pred ecEEEEEccCcEEEEEeCCC---------CCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCC
Q 040693 205 HDIVVAVQKSGFAWALDRDS---------GSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTI 275 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~t---------G~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 275 (382)
+..++++..++.+..+|..+ ++.+..+.... .........+.++++ ..
T Consensus 112 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~l~~~-----------------~~ 168 (342)
T 1yfq_A 112 DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKN------KIFTMDTNSSRLIVG-----------------MN 168 (342)
T ss_dssp TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCC------CEEEEEECSSEEEEE-----------------ES
T ss_pred CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCC------ceEEEEecCCcEEEE-----------------eC
Confidence 46788888999999999888 77776665321 223333333445555 34
Q ss_pred CceEEEEECCC-CcEEeeecCCCCCCCCcceEE---eCCEEEEeeecCCCcEEEEeCCCC------cEeEEEecCCc---
Q 040693 276 AGGWVAMDASN-GNVLWSTADPSNGTAPGPVTV---ANGVLFGGSTYRQGPIYAMDVKTG------KILWSYDTGAT--- 342 (382)
Q Consensus 276 ~g~v~a~d~~t-G~~~W~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~g~l~~ld~~tG------~ilw~~~~~~~--- 342 (382)
++.|..+|.++ ++................+.+ ++..+++++ .+|.+...|.+.+ +.+..+.....
T Consensus 169 d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T 1yfq_A 169 NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS--IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK 246 (342)
T ss_dssp TTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE--TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTT
T ss_pred CCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEe--cCCcEEEEEEcCCCcccccccceeeeccccccc
Confidence 58899999998 764333221110111222223 345666666 4899999888766 77777765422
Q ss_pred ------eecceEE--eCCEEEEEeCceeEeecCCccCCCCCeEEEE
Q 040693 343 ------IYGGASV--SNGCIYMGNGYKVTVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 343 ------~~~~p~~--~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~ 380 (382)
......+ .+..|+.++.+|. +.+| |..+++.+..+
T Consensus 247 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~vw--d~~~~~~~~~~ 289 (342)
T 1yfq_A 247 DTNLAYPVNSIEFSPRHKFLYTAGSDGI-ISCW--NLQTRKKIKNF 289 (342)
T ss_dssp CCSSCCCEEEEEECTTTCCEEEEETTSC-EEEE--ETTTTEEEEEC
T ss_pred ccccceeEEEEEEcCCCCEEEEecCCce-EEEE--cCccHhHhhhh
Confidence 2223333 2344665666655 3444 45567776654
No 133
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.12 E-value=0.0011 Score=61.98 Aligned_cols=67 Identities=15% Similarity=0.095 Sum_probs=41.7
Q ss_pred CCEEEEeeecCCCcEEEEeCCCCcEeEEE--ecCCce---ecceEE--eCCEEEEEeCc-eeEeecCCccCCCCCe
Q 040693 309 NGVLFGGSTYRQGPIYAMDVKTGKILWSY--DTGATI---YGGASV--SNGCIYMGNGY-KVTVGFGNKNFTSGTS 376 (382)
Q Consensus 309 ~~~v~~~~~~~~g~l~~ld~~tG~ilw~~--~~~~~~---~~~p~~--~~g~lyv~~~~-g~~~~~~~~~~~~g~~ 376 (382)
+..+|+... .++.|..+|.++|++.... ...... ...+.+ .+..||+++.. ...+.+|.++..+|+.
T Consensus 222 g~~l~v~~~-~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~ 296 (361)
T 3scy_A 222 GKFAYLINE-IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL 296 (361)
T ss_dssp SSEEEEEET-TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE
T ss_pred CCEEEEEcC-CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE
Confidence 347877763 4788999999888764332 221111 112333 34458888776 5567888888878874
No 134
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.12 E-value=0.0012 Score=60.94 Aligned_cols=123 Identities=11% Similarity=0.064 Sum_probs=69.6
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCC-CcEE
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASN-GNVL 290 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~t-G~~~ 290 (382)
.+.|+.+|.++++..-..... ....+.+. ++..+|+... ..+.|+.+|.++ |+.+
T Consensus 161 ~~~l~~~~~~~~~~~~~~~~~------~~~~~i~~~~dg~~l~v~~~----------------~~~~i~~~d~~~~g~~~ 218 (333)
T 2dg1_A 161 LGGVYYVSPDFRTVTPIIQNI------SVANGIALSTDEKVLWVTET----------------TANRLHRIALEDDGVTI 218 (333)
T ss_dssp CEEEEEECTTSCCEEEEEEEE------SSEEEEEECTTSSEEEEEEG----------------GGTEEEEEEECTTSSSE
T ss_pred CceEEEEeCCCCEEEEeecCC------CcccceEECCCCCEEEEEeC----------------CCCeEEEEEecCCCcCc
Confidence 467999998877654322110 01122222 4456777632 246799999874 5543
Q ss_pred eee------cCCCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCc------eecceEEe-C-CEEE
Q 040693 291 WST------ADPSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGAT------IYGGASVS-N-GCIY 355 (382)
Q Consensus 291 W~~------~~~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~------~~~~p~~~-~-g~ly 355 (382)
... .... ......+.++ ++.+|+++. .++.|+.+|+ +|+.+.++..+.. ...++++. + ++||
T Consensus 219 ~~~~~~~~~~~~~-~~~~~~i~~d~~G~l~v~~~-~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~ 295 (333)
T 2dg1_A 219 QPFGATIPYYFTG-HEGPDSCCIDSDDNLYVAMY-GQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLI 295 (333)
T ss_dssp EEEEEEEEEECCS-SSEEEEEEEBTTCCEEEEEE-TTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEE
T ss_pred ccccceEEEecCC-CCCCCceEECCCCCEEEEEc-CCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEE
Confidence 321 1111 0011223444 467888774 3578999998 5888888876543 23344442 3 5899
Q ss_pred EEeCce
Q 040693 356 MGNGYK 361 (382)
Q Consensus 356 v~~~~g 361 (382)
+++..|
T Consensus 296 v~~~~g 301 (333)
T 2dg1_A 296 ICSNDI 301 (333)
T ss_dssp EEEECG
T ss_pred EEeCcc
Confidence 988764
No 135
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.11 E-value=0.0008 Score=63.98 Aligned_cols=146 Identities=9% Similarity=0.082 Sum_probs=85.9
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
...+++++.|+.+..+|..+++.+..+.... .......... ++..++++ ..++.|..+
T Consensus 144 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~-----------------~~d~~i~iw 203 (402)
T 2aq5_A 144 QNVLLSAGCDNVILVWDVGTGAAVLTLGPDV---HPDTIYSVDWSRDGALICTS-----------------CRDKRVRVI 203 (402)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECTTT---CCSCEEEEEECTTSSCEEEE-----------------ETTSEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCccEEEecCC---CCCceEEEEECCCCCEEEEE-----------------ecCCcEEEE
Confidence 3688888999999999999999888873111 0112222222 45556665 345889999
Q ss_pred ECCCCcEEeee-cCCCCCCCCcceEE-eCCEEEEeee--cCCCcEEEEeCCCCcE-eEEEecCC-ceecceEE--eCCEE
Q 040693 283 DASNGNVLWST-ADPSNGTAPGPVTV-ANGVLFGGST--YRQGPIYAMDVKTGKI-LWSYDTGA-TIYGGASV--SNGCI 354 (382)
Q Consensus 283 d~~tG~~~W~~-~~~~~~~~~~~~~~-~~~~v~~~~~--~~~g~l~~ld~~tG~i-lw~~~~~~-~~~~~p~~--~~g~l 354 (382)
|+++++.+.+. ....... ...+.. .++.+++... ..++.|..+|..+++. +-...... .....+.+ .+..|
T Consensus 204 d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 282 (402)
T 2aq5_A 204 EPRKGTVVAEKDRPHEGTR-PVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIV 282 (402)
T ss_dssp ETTTTEEEEEEECSSCSSS-CCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEE
T ss_pred eCCCCceeeeeccCCCCCc-ceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEE
Confidence 99999999887 3332211 122223 3454444331 1489999999998765 33333322 22233333 34566
Q ss_pred EEEeCceeEeecCCccC
Q 040693 355 YMGNGYKVTVGFGNKNF 371 (382)
Q Consensus 355 yv~~~~g~~~~~~~~~~ 371 (382)
+++.+....+.+|.++.
T Consensus 283 ~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 283 YLCGKGDSSIRYFEITS 299 (402)
T ss_dssp EEEETTCSCEEEEEECS
T ss_pred EEEEcCCCeEEEEEecC
Confidence 66654334455666554
No 136
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.10 E-value=0.0016 Score=58.65 Aligned_cols=186 Identities=16% Similarity=0.157 Sum_probs=107.0
Q ss_pred ceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc--CcEEEEE
Q 040693 143 NSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK--SGFAWAL 220 (382)
Q Consensus 143 g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~--~g~l~al 220 (382)
+.|..+|++ |+.++++....... +....|.-..+. + .++.+++... ++.++.+
T Consensus 51 ~~i~~~d~~-g~~~~~~~~~~~~~---------------------~~~~~p~~i~~~-~--~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 51 HRIQIFDKE-GRFKFQFGECGKRD---------------------SQLLYPNRVAVV-R--NSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TEEEEECTT-SCEEEEECCBSSST---------------------TCBSSEEEEEEE-T--TTTEEEEEECGGGCEEEEE
T ss_pred CEEEEECCC-CcEEEEecccCCCc---------------------ccccCceEEEEE-c--CCCeEEEEcCCCCCEEEEE
Confidence 789999976 99888875432100 001223222221 1 1345666553 7889999
Q ss_pred eCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCC
Q 040693 221 DRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNG 299 (382)
Q Consensus 221 d~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~ 299 (382)
| .+|+.+..+..... ......++ .++.+|++.. ..+.|..+|+ +|+.++........
T Consensus 106 d-~~g~~~~~~~~~~~----~~~~~i~~~~~g~l~v~~~----------------~~~~i~~~~~-~g~~~~~~~~~~~~ 163 (286)
T 1q7f_A 106 N-QYGQFVRKFGATIL----QHPRGVTVDNKGRIIVVEC----------------KVMRVIIFDQ-NGNVLHKFGCSKHL 163 (286)
T ss_dssp C-TTSCEEEEECTTTC----SCEEEEEECTTSCEEEEET----------------TTTEEEEECT-TSCEEEEEECTTTC
T ss_pred C-CCCcEEEEecCccC----CCceEEEEeCCCCEEEEEC----------------CCCEEEEEcC-CCCEEEEeCCCCcc
Confidence 9 56888877753211 12223333 3456787632 2467999995 58887776543211
Q ss_pred CCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCc--eecceEE-eCCEEEEEeCcee-EeecCCccCCCC
Q 040693 300 TAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGAT--IYGGASV-SNGCIYMGNGYKV-TVGFGNKNFTSG 374 (382)
Q Consensus 300 ~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~--~~~~p~~-~~g~lyv~~~~g~-~~~~~~~~~~~g 374 (382)
.....+.++ ++.+|++.. .++.|+.+|. +|+.+.++...+. .....++ .+|+||+++.... .+.+| + .+|
T Consensus 164 ~~p~~i~~~~~g~l~v~~~-~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~--~-~~g 238 (286)
T 1q7f_A 164 EFPNGVVVNDKQEIFISDN-RAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIF--T-QDG 238 (286)
T ss_dssp SSEEEEEECSSSEEEEEEG-GGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEE--C-TTS
T ss_pred CCcEEEEECCCCCEEEEEC-CCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEE--C-CCC
Confidence 112234444 478888763 4689999997 5788777754321 1122333 4689999986542 34444 3 357
Q ss_pred CeEEEE
Q 040693 375 TSLYAF 380 (382)
Q Consensus 375 ~~l~~~ 380 (382)
+.+..+
T Consensus 239 ~~~~~~ 244 (286)
T 1q7f_A 239 QLISAL 244 (286)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 766655
No 137
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.10 E-value=0.0026 Score=56.98 Aligned_cols=149 Identities=9% Similarity=-0.053 Sum_probs=80.3
Q ss_pred cEEEEE-ccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeee--CCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 206 DIVVAV-QKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATD--ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 206 ~~v~~~-~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+.||+. ...+.+..+|.+.....-..... .....+.+++ ++.+|++... ...+.|+.+
T Consensus 91 ~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-----~~~P~~i~vd~~~g~lyv~~~~--------------~~~~~I~~~ 151 (267)
T 1npe_A 91 RTIFWTDSQLDRIEVAKMDGTQRRVLFDTG-----LVNPRGIVTDPVRGNLYWTDWN--------------RDNPKIETS 151 (267)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSS-----CSSEEEEEEETTTTEEEEEECC--------------SSSCEEEEE
T ss_pred CeEEEEECCCCEEEEEEcCCCCEEEEEECC-----CCCccEEEEeeCCCEEEEEECC--------------CCCcEEEEE
Confidence 345444 45678888887632221111111 0122233443 6889987432 113578888
Q ss_pred ECCCCcEEeee-cCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEeCCEEEEEeC
Q 040693 283 DASNGNVLWST-ADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVSNGCIYMGNG 359 (382)
Q Consensus 283 d~~tG~~~W~~-~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~~g~lyv~~~ 359 (382)
++. |+..-.. .... .....+.++ ++.+|++.. ..+.|+.+|+++++..-..+. ...-....+.++.||+++.
T Consensus 152 ~~d-g~~~~~~~~~~~--~~P~gia~d~~~~~lyv~d~-~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d~~~lyva~~ 226 (267)
T 1npe_A 152 HMD-GTNRRILAQDNL--GLPNGLTFDAFSSQLCWVDA-GTHRAECLNPAQPGRRKVLEG-LQYPFAVTSYGKNLYYTDW 226 (267)
T ss_dssp ETT-SCCCEEEECTTC--SCEEEEEEETTTTEEEEEET-TTTEEEEEETTEEEEEEEEEC-CCSEEEEEEETTEEEEEET
T ss_pred ecC-CCCcEEEEECCC--CCCcEEEEcCCCCEEEEEEC-CCCEEEEEecCCCceEEEecC-CCCceEEEEeCCEEEEEEC
Confidence 865 3321111 1111 112234444 578999875 567899999985543332221 1111234567999999986
Q ss_pred ceeEeecCCccCCCCCeEEEE
Q 040693 360 YKVTVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 360 ~g~~~~~~~~~~~~g~~l~~~ 380 (382)
.... ++.++..+|+.+-.+
T Consensus 227 ~~~~--v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 227 KTNS--VIAMDLAISKEMDTF 245 (267)
T ss_dssp TTTE--EEEEETTTTEEEEEE
T ss_pred CCCe--EEEEeCCCCCceEEE
Confidence 5432 466888888876544
No 138
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.10 E-value=0.00026 Score=67.45 Aligned_cols=145 Identities=11% Similarity=0.059 Sum_probs=83.8
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
++.|..+|..+|+.+.++...... ....-.....+ +..|+++..++.+..+|
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~-------------------------~~v~~~~~~~~---~~~l~~~~~d~~i~iwd 204 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHP-------------------------DTIYSVDWSRD---GALICTSCRDKRVRVIE 204 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCC-------------------------SCEEEEEECTT---SSCEEEEETTSEEEEEE
T ss_pred CCEEEEEECCCCCccEEEecCCCC-------------------------CceEEEEECCC---CCEEEEEecCCcEEEEe
Confidence 388999999999988877422111 01111112222 46778888899999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEe-cCccccccccCCCCCCCCCceEEEEECCCCcE-EeeecCCCC
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNI-ANSQHKNFNLKPSKNSTIAGGWVAMDASNGNV-LWSTADPSN 298 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~-~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~-~W~~~~~~~ 298 (382)
..+++.+..+..... +........ .++.+++.. .. ..++.|..+|.++++. +-.......
T Consensus 205 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~g~~~--------------~~d~~i~iwd~~~~~~~~~~~~~~~~ 267 (402)
T 2aq5_A 205 PRKGTVVAEKDRPHE---GTRPVHAVFVSEGKILTTGFSR--------------MSERQVALWDTKHLEEPLSLQELDTS 267 (402)
T ss_dssp TTTTEEEEEEECSSC---SSSCCEEEECSTTEEEEEEECT--------------TCCEEEEEEETTBCSSCSEEEECCCC
T ss_pred CCCCceeeeeccCCC---CCcceEEEEcCCCcEEEEeccC--------------CCCceEEEEcCccccCCceEEeccCC
Confidence 999999888732211 111111111 234444432 11 2358899999999875 323332221
Q ss_pred CCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcE
Q 040693 299 GTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKI 333 (382)
Q Consensus 299 ~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~i 333 (382)
. ....+.+. +..++++.. .++.|..+|..+++.
T Consensus 268 ~-~v~~~~~s~~~~~l~~~g~-~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 268 S-GVLLPFFDPDTNIVYLCGK-GDSSIRYFEITSEAP 302 (402)
T ss_dssp S-SCEEEEEETTTTEEEEEET-TCSCEEEEEECSSTT
T ss_pred C-ceeEEEEcCCCCEEEEEEc-CCCeEEEEEecCCCc
Confidence 1 12222332 456665442 489999999999883
No 139
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.09 E-value=0.0026 Score=57.08 Aligned_cols=129 Identities=15% Similarity=0.066 Sum_probs=71.1
Q ss_pred cEEEEE-ccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 206 DIVVAV-QKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 206 ~~v~~~-~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
+.++++ ..++.++.+|.+ |+... +..+. .......... .++.+|++.. ..+.|..+|
T Consensus 115 g~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~---~~~~~~~i~~d~~g~l~v~~~----------------~~~~i~~~~ 173 (300)
T 2qc5_A 115 GDIWFTQLNGDRIGKLTAD-GTIYE-YDLPN---KGSYPAFITLGSDNALWFTEN----------------QNNSIGRIT 173 (300)
T ss_dssp TCEEEEETTTTEEEEECTT-SCEEE-EECSS---TTCCEEEEEECTTSSEEEEET----------------TTTEEEEEC
T ss_pred CCEEEEccCCCeEEEECCC-CCEEE-ccCCC---CCCCceeEEECCCCCEEEEec----------------CCCeEEEEC
Confidence 345554 446789999998 87763 22221 1112223333 3456887632 246799999
Q ss_pred CCCCcEEeeecCCCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC--ceecceEE-eCCEEEEEeC
Q 040693 284 ASNGNVLWSTADPSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA--TIYGGASV-SNGCIYMGNG 359 (382)
Q Consensus 284 ~~tG~~~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~--~~~~~p~~-~~g~lyv~~~ 359 (382)
+ +|+..- +..+........+.++ ++.+|+++. ..+.|+.+|+ +|+.... ..+. ......++ .+|+||+++.
T Consensus 174 ~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~-~~~~i~~~~~-~g~~~~~-~~~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 174 N-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEI-MGNKIGRITT-TGEISEY-DIPTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp T-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEET-TTTEEEEECT-TCCEEEE-ECSSTTCCEEEEEECSTTCEEEEET
T ss_pred C-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEcc-CCCEEEEEcC-CCcEEEE-ECCCCCCCceEEEECCCCCEEEecc
Confidence 8 776653 3332211112233444 567888774 3567999998 6776543 2221 11222333 3688999985
Q ss_pred c
Q 040693 360 Y 360 (382)
Q Consensus 360 ~ 360 (382)
.
T Consensus 249 ~ 249 (300)
T 2qc5_A 249 G 249 (300)
T ss_dssp T
T ss_pred C
Confidence 4
No 140
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.08 E-value=0.0026 Score=58.97 Aligned_cols=216 Identities=13% Similarity=0.196 Sum_probs=114.4
Q ss_pred cCEEEEeccCccccccccccccccceEEEEeCccCc--eeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcC
Q 040693 31 KGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGR--ILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATG 108 (382)
Q Consensus 31 ~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~--~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~ 108 (382)
++.+|++... ++.|+.+|+ +|+ .+.+................. ...+++++++.+|++..
T Consensus 101 ~g~l~v~d~~-------------~~~v~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~~P----~~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 101 DGNYWVTDVA-------------LHQVFKLDP-HSKEGPLLILGRSMQPGSDQNHFCQP----TDVAVEPSTGAVFVSDG 162 (329)
T ss_dssp TSCEEEEETT-------------TTEEEEECT-TCSSCCSEEESBTTBCCCSTTCCSSE----EEEEECTTTCCEEEEEC
T ss_pred CCCEEEEECC-------------CCEEEEEeC-CCCeEEEEEecccCCCCCCccccCCC----cEEEEeCCCCeEEEEeC
Confidence 4678887652 678999997 565 444442210000000000000 12567765678888763
Q ss_pred -CCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCC
Q 040693 109 -NLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDA 187 (382)
Q Consensus 109 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (382)
. .+.|..+| .+|+.++.+.......- +..
T Consensus 163 ~~--------------------------------~~~I~~~~-~~g~~~~~~~~~g~~~~-----------------~~~ 192 (329)
T 3fvz_A 163 YC--------------------------------NSRIVQFS-PSGKFVTQWGEESSGSS-----------------PRP 192 (329)
T ss_dssp SS--------------------------------CCEEEEEC-TTSCEEEEECEECCSSS-----------------CCT
T ss_pred CC--------------------------------CCeEEEEc-CCCCEEEEeccCCCCCC-----------------CCC
Confidence 2 27899999 57999988754322100 000
Q ss_pred CCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCcccccccc
Q 040693 188 DFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNL 267 (382)
Q Consensus 188 ~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~ 267 (382)
.--..|.-..+..++ +.++++...++.+..+|.++|+.+..+..... +...+.....-+.+|....+ .+..
T Consensus 193 ~~~~~p~gia~d~~~--g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~---~~~~~~~~~~pg~~~~~~g~----~~v~ 263 (329)
T 3fvz_A 193 GQFSVPHSLALVPHL--DQLCVADRENGRIQCFKTDTKEFVREIKHASF---GRNVFAISYIPGFLFAVNGK----PYFG 263 (329)
T ss_dssp TEESCEEEEEEETTT--TEEEEEETTTTEEEEEETTTCCEEEEECCTTT---TTCEEEEEEETTEEEEEECC----CCTT
T ss_pred cccCCCcEEEEECCC--CEEEEEECCCCEEEEEECCCCcEEEEEecccc---CCCcceeeecCCEEEEeCCC----EEec
Confidence 001223333333222 34445556678999999999999988764321 11222222233556655322 1111
Q ss_pred CCCCCCCCCceEEEEECCCCcEEeeecCCCCCC-CCcceEEe-CCEEEEeeecCCCcEEEEeCC
Q 040693 268 KPSKNSTIAGGWVAMDASNGNVLWSTADPSNGT-APGPVTVA-NGVLFGGSTYRQGPIYAMDVK 329 (382)
Q Consensus 268 ~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~-~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~ 329 (382)
. .....+..+|..+|+.+..+....... ....+.++ ++.+|++.. .++.|..++++
T Consensus 264 ~-----~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~-~~~~I~~~~~~ 321 (329)
T 3fvz_A 264 D-----QEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDA-HTNTVWKFTLT 321 (329)
T ss_dssp C-----SCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEES-SSCCEEEEEEE
T ss_pred c-----CCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEEC-CCCEEEEEeCC
Confidence 1 234579999999999988764221111 11223333 456777654 45667777654
No 141
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.07 E-value=0.00086 Score=61.71 Aligned_cols=133 Identities=11% Similarity=0.104 Sum_probs=72.6
Q ss_pred EEEEEc-cCcEEEEEeCCCCC-eeeeecc--C--CCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEE
Q 040693 207 IVVAVQ-KSGFAWALDRDSGS-LIWSMEA--G--PGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWV 280 (382)
Q Consensus 207 ~v~~~~-~~g~l~ald~~tG~-~~W~~~~--~--~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~ 280 (382)
.+++.. .++.++.+|..+++ .+|.... . ..........+...+++.+|++.. ..+.|+
T Consensus 129 ~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~----------------~~~~I~ 192 (306)
T 2p4o_A 129 QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT----------------EKMLLL 192 (306)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET----------------TTTEEE
T ss_pred cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC----------------CCCEEE
Confidence 444444 57899999998764 3342211 0 000000011112336778998742 347799
Q ss_pred EEECCC-CcE----EeeecCCCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeE--EEecCCceecceEEe--
Q 040693 281 AMDASN-GNV----LWSTADPSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILW--SYDTGATIYGGASVS-- 350 (382)
Q Consensus 281 a~d~~t-G~~----~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw--~~~~~~~~~~~p~~~-- 350 (382)
.||... |+. .+. ... ...-+.++ ++.+|++.. ..+.|..||++ |++.- +.+.+...-.+.++.
T Consensus 193 ~~~~~~~g~~~~~~~~~-~~~----~P~gi~vd~dG~l~va~~-~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~ 265 (306)
T 2p4o_A 193 RIPVDSTDKPGEPEIFV-EQT----NIDDFAFDVEGNLYGATH-IYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQT 265 (306)
T ss_dssp EEEBCTTSCBCCCEEEE-ESC----CCSSEEEBTTCCEEEECB-TTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCS
T ss_pred EEEeCCCCCCCccEEEe-ccC----CCCCeEECCCCCEEEEeC-CCCeEEEECCC-CCEEEEeecccccCCceEEEEecc
Confidence 999875 542 111 111 12234444 567888875 56899999986 87733 333332222344443
Q ss_pred ---CCEEEEEeCcee
Q 040693 351 ---NGCIYMGNGYKV 362 (382)
Q Consensus 351 ---~g~lyv~~~~g~ 362 (382)
+++|||++..+.
T Consensus 266 ~~d~~~LyVt~~~~~ 280 (306)
T 2p4o_A 266 EGDCTAIYVVTNGGM 280 (306)
T ss_dssp TTTTTEEEEEECTTS
T ss_pred cCCCCEEEEECCCCc
Confidence 379999987543
No 142
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.07 E-value=0.00084 Score=62.03 Aligned_cols=224 Identities=11% Similarity=0.057 Sum_probs=128.3
Q ss_pred cceEEEEeCcc-Ccee-eeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCC
Q 040693 54 QGSLAKLDAKT-GRIL-WQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTS 131 (382)
Q Consensus 54 ~g~l~ald~~t-G~~l-W~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (382)
++.|..+|.++ ++.+ -....... .+ ....+.+++..++.+..+
T Consensus 63 dg~i~iw~~~~~~~~~~~~~~~h~~-----------~v--~~~~~~~~~~~l~s~~~d---------------------- 107 (368)
T 3mmy_A 63 ANDVRCWEVQDSGQTIPKAQQMHTG-----------PV--LDVCWSDDGSKVFTASCD---------------------- 107 (368)
T ss_dssp TSEEEEEEECTTSCEEEEEEEECSS-----------CE--EEEEECTTSSEEEEEETT----------------------
T ss_pred CCcEEEEEcCCCCceeEEEeccccC-----------CE--EEEEECcCCCEEEEEcCC----------------------
Confidence 88999999987 5554 22221100 01 134566666677766543
Q ss_pred CCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEE
Q 040693 132 PDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAV 211 (382)
Q Consensus 132 ~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~ 211 (382)
+.|..+|..+++.+........ + .-...... ..+..++++
T Consensus 108 -----------g~v~iwd~~~~~~~~~~~~~~~-v---------------------------~~~~~~~~-~~~~~l~~~ 147 (368)
T 3mmy_A 108 -----------KTAKMWDLSSNQAIQIAQHDAP-V---------------------------KTIHWIKA-PNYSCVMTG 147 (368)
T ss_dssp -----------SEEEEEETTTTEEEEEEECSSC-E---------------------------EEEEEEEC-SSCEEEEEE
T ss_pred -----------CcEEEEEcCCCCceeeccccCc-e---------------------------EEEEEEeC-CCCCEEEEc
Confidence 8999999999987764432211 0 11111001 114568888
Q ss_pred ccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 212 QKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 212 ~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
..++.+..+|..+++.+..++... ...........+++.. .++.+..+|..+....+
T Consensus 148 ~~dg~i~vwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-----------------~~~~i~~~~~~~~~~~~ 204 (368)
T 3mmy_A 148 SWDKTLKFWDTRSSNPMMVLQLPE------RCYCADVIYPMAVVAT-----------------AERGLIVYQLENQPSEF 204 (368)
T ss_dssp ETTSEEEEECSSCSSCSEEEECSS------CEEEEEEETTEEEEEE-----------------GGGCEEEEECSSSCEEE
T ss_pred cCCCcEEEEECCCCcEEEEEecCC------CceEEEecCCeeEEEe-----------------CCCcEEEEEeccccchh
Confidence 889999999999999998887542 2222233456666653 34779999999887777
Q ss_pred eecCCCCCCCCcceEE--eCC----EEEEeeecCCCcEEEEeCCCC---cEeEEEecCCc------------eecceEE-
Q 040693 292 STADPSNGTAPGPVTV--ANG----VLFGGSTYRQGPIYAMDVKTG---KILWSYDTGAT------------IYGGASV- 349 (382)
Q Consensus 292 ~~~~~~~~~~~~~~~~--~~~----~v~~~~~~~~g~l~~ld~~tG---~ilw~~~~~~~------------~~~~p~~- 349 (382)
.............+.+ ... .++.++ .++.+..+|..++ +.+..+..... ......+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 282 (368)
T 3mmy_A 205 RRIESPLKHQHRCVAIFKDKQNKPTGFALGS--IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFH 282 (368)
T ss_dssp EECCCSCSSCEEEEEEEECTTSCEEEEEEEE--TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEEC
T ss_pred hhccccccCCCceEEEcccCCCCCCeEEEec--CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEe
Confidence 6543321111111111 111 255555 4899999999877 45555543321 1222333
Q ss_pred -eCCEEEEEeCceeEeecCCccCCCCCeEEEE
Q 040693 350 -SNGCIYMGNGYKVTVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 350 -~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~~ 380 (382)
.+..|+.++.+|. +.+|. ..+++.+..+
T Consensus 283 p~~~~l~s~~~dg~-i~iwd--~~~~~~~~~~ 311 (368)
T 3mmy_A 283 PVHGTLATVGSDGR-FSFWD--KDARTKLKTS 311 (368)
T ss_dssp TTTCCEEEEETTSC-EEEEE--TTTTEEEEEC
T ss_pred cCCCEEEEEccCCe-EEEEE--CCCCcEEEEe
Confidence 2345555656655 44554 4457766544
No 143
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.07 E-value=0.00046 Score=68.99 Aligned_cols=147 Identities=13% Similarity=0.019 Sum_probs=83.6
Q ss_pred cEEEEEccC----cEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCC-eEEEEecCccccccccCCCCCCCCCce
Q 040693 206 DIVVAVQKS----GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DER-RIYTNIANSQHKNFNLKPSKNSTIAGG 278 (382)
Q Consensus 206 ~~v~~~~~~----g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~-~v~~~~~~~~~~~~~~~~~~~~~~~g~ 278 (382)
..++++..+ +.++.+| +++.+....... ........ ++. .++.+ ..++.
T Consensus 129 ~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~-----------------~~d~~ 184 (615)
T 1pgu_A 129 RRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHS-----QRINACHLKQSRPMRSMTV-----------------GDDGS 184 (615)
T ss_dssp SEEEEEECCSSCSEEEEETT--TCCEEEECCSCS-----SCEEEEEECSSSSCEEEEE-----------------ETTTE
T ss_pred CEEEEeccCCCCccEEEEEE--CCCcceeeecCC-----ccEEEEEECCCCCcEEEEE-----------------eCCCc
Confidence 455555544 6777777 677766655321 12222222 333 44444 34588
Q ss_pred EEEEECCCCcEEeeecCCCCCC-CCcceEE--e-CCEEEEeeecCCCcEEEEeCCCCcEeEEE-e---cCCceecceEEe
Q 040693 279 WVAMDASNGNVLWSTADPSNGT-APGPVTV--A-NGVLFGGSTYRQGPIYAMDVKTGKILWSY-D---TGATIYGGASVS 350 (382)
Q Consensus 279 v~a~d~~tG~~~W~~~~~~~~~-~~~~~~~--~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~-~---~~~~~~~~p~~~ 350 (382)
|..+|.++++.+.+........ ....+.+ + +.+++.++ .++.|..+|..+++.+.++ . ............
T Consensus 185 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~ 262 (615)
T 1pgu_A 185 VVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG--SDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL 262 (615)
T ss_dssp EEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE--TTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES
T ss_pred EEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEe--CCCeEEEEECCCCCEeEEecccccccCCceEEEEEc
Confidence 9999999999988876543200 1122223 2 34666666 4899999999999999888 3 222222222222
Q ss_pred CCE-EEEEeCceeEeecCCccCCCCCeEEEEE
Q 040693 351 NGC-IYMGNGYKVTVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 351 ~g~-lyv~~~~g~~~~~~~~~~~~g~~l~~~~ 381 (382)
+++ |+.++.+|. +.+|. ..+++.+..+.
T Consensus 263 ~~~~l~~~~~d~~-i~~wd--~~~~~~~~~~~ 291 (615)
T 1pgu_A 263 DSQKFATVGADAT-IRVWD--VTTSKCVQKWT 291 (615)
T ss_dssp SSSEEEEEETTSE-EEEEE--TTTTEEEEEEE
T ss_pred CCCEEEEEcCCCc-EEEEE--CCCCcEEEEEc
Confidence 544 444555544 44554 45577776654
No 144
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.07 E-value=4.6e-05 Score=76.46 Aligned_cols=230 Identities=13% Similarity=0.039 Sum_probs=129.7
Q ss_pred EEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceee-CCCCeEEEEc
Q 040693 29 YYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSID-PIRNHVYIAT 107 (382)
Q Consensus 29 v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~v~v~~ 107 (382)
..+..+||... .+.+|..+|+++.+......+.... . ..| ..... ++.++||++.
T Consensus 99 ~DG~~lfVnd~-------------~~~rVavIdl~t~~~~~ii~ip~g~-~----phg------~~~~~~p~~~~v~~~~ 154 (595)
T 1fwx_A 99 YDGRFLFMNDK-------------ANTRVARVRCDVMKCDAILEIPNAK-G----IHG------LRPQKWPRSNYVFCNG 154 (595)
T ss_dssp EEEEEEEEEET-------------TTTEEEEEETTTTEEEEEEECSSCC-S----EEE------EEECCSSBCSEEEEEE
T ss_pred cCCCEEEEEcC-------------CCCEEEEEECCCceEeeEEeCCCCC-C----Ccc------eeeeecCCCcEEEEec
Confidence 34577888654 2678999999999988866541100 0 001 12224 6778999986
Q ss_pred CCCCCCCcchhhcccccCCCCCCCCCCCCCC--CCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCC
Q 040693 108 GNLYSVPLHIRQCQEENNQTTPTSPDKCIEP--ENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSP 185 (382)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (382)
.. +.|...+++... +.+++.+.+||.+|.+++|+......
T Consensus 155 ~~-----------------~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~--------------------- 196 (595)
T 1fwx_A 155 ED-----------------ETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGN--------------------- 196 (595)
T ss_dssp CS-----------------CEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSC---------------------
T ss_pred cc-----------------ccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCC---------------------
Confidence 54 223333333332 45578999999999999999988542
Q ss_pred CCCCCCCceEEEeeeCceeecEEEEEccCc---------------EEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeC
Q 040693 186 DADFGEAPMMLSMYRNKVKHDIVVAVQKSG---------------FAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDE 250 (382)
Q Consensus 186 ~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g---------------~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~ 250 (382)
|-......+ +..+++...++ .+..+|..+.+ ...-++
T Consensus 197 -------pd~~~~spd---Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~------------------~~v~~G 248 (595)
T 1fwx_A 197 -------LDNCDADYE---GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE------------------KAIAAG 248 (595)
T ss_dssp -------CCCEEECSS---SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH------------------HHHHHT
T ss_pred -------ccceEECCC---CCEEEEEecCcccCcchhhccccccceEEEeecccee------------------EeccCC
Confidence 111111111 23333333221 11111111000 000023
Q ss_pred CeEEEEecCccccccccCCCCCCCCCceEEEEECCC--CcE-EeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEe
Q 040693 251 RRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASN--GNV-LWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMD 327 (382)
Q Consensus 251 ~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~t--G~~-~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld 327 (382)
...++ +.|..||.++ +++ +-.++.+.. .....+.-++.++|++.. ....+..+|
T Consensus 249 k~~~i---------------------~~V~VID~~~~~~~~~~~~Ipvg~~-PhGv~~sPDGk~v~V~~~-~s~~VsVid 305 (595)
T 1fwx_A 249 DYQEL---------------------NGVKVVDGRKEASSLFTRYIPIANN-PHGCNMAPDKKHLCVAGK-LSPTVTVLD 305 (595)
T ss_dssp CSEEE---------------------TTEEEEECSGGGCCSSEEEEEEESS-CCCEEECTTSSEEEEECT-TSSBEEEEE
T ss_pred CeeEE---------------------CcEEEEeCcccCCceeEEEEecCCC-ceEEEEcCCCCEEEEeCC-CCCeEEEEE
Confidence 33343 4499999999 766 667776542 233333335667888764 578899999
Q ss_pred CCCCc------------EeEEEecCCceecceEEeCCEEEEEeCceeEeecCCccC
Q 040693 328 VKTGK------------ILWSYDTGATIYGGASVSNGCIYMGNGYKVTVGFGNKNF 371 (382)
Q Consensus 328 ~~tG~------------ilw~~~~~~~~~~~p~~~~g~lyv~~~~g~~~~~~~~~~ 371 (382)
.++.+ ++.+.+.+.+-.....-.+|++|++..-...+..|+++.
T Consensus 306 ~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 306 VTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp GGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 98653 455555554322222224579999887666555566554
No 145
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.07 E-value=0.00082 Score=64.48 Aligned_cols=150 Identities=9% Similarity=0.011 Sum_probs=91.4
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
++.|..+|..+++.++++...... ....-..+..+ +..+++++.++.+..+|
T Consensus 191 d~~i~iwd~~~~~~~~~~~~~~h~-------------------------~~v~~~~~s~~---~~~l~s~~~dg~i~iwd 242 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIENSPRH-------------------------GAVSSICIDEE---CCVLILGTTRGIIDIWD 242 (437)
T ss_dssp TSEEEEEETTTCCEEEEEECCGGG-------------------------CCEEEEEECTT---SCEEEEEETTSCEEEEE
T ss_pred CCeEEEEeCCCCeeeEEEccCCCC-------------------------CceEEEEECCC---CCEEEEEcCCCeEEEEE
Confidence 389999999999999998764221 00111111222 46788899999999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceee-eCC-eEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCC
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAAT-DER-RIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNG 299 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~-~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~ 299 (382)
..+++.+-.+............+.+.. .++ .++.+ ..++.|..+|.++|+.+.........
T Consensus 243 ~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~-----------------~~dg~i~iwd~~~~~~~~~~~~~~~~ 305 (437)
T 3gre_A 243 IRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGG-----------------SSKTFLTIWNFVKGHCQYAFINSDEQ 305 (437)
T ss_dssp TTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEE-----------------STTEEEEEEETTTTEEEEEEESSSSC
T ss_pred cCCccEEEEEecCCCCceEEEEeccccCCCccEEEEE-----------------cCCCcEEEEEcCCCcEEEEEEcCCCC
Confidence 999998877654221000001111111 123 33333 34588999999999987776532210
Q ss_pred CC------------------------CcceEEeCC-EEEEeeecCCCcEEEEeCCCCcEeEEEe
Q 040693 300 TA------------------------PGPVTVANG-VLFGGSTYRQGPIYAMDVKTGKILWSYD 338 (382)
Q Consensus 300 ~~------------------------~~~~~~~~~-~v~~~~~~~~g~l~~ld~~tG~ilw~~~ 338 (382)
.. ...+.+.++ +++.++ .++.|...|.++++.+-.+.
T Consensus 306 ~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 306 PSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDE--ATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp CCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEG--GGTEEEEEETTCGGGCEEEE
T ss_pred CccceecccccccccceecccccCCceEEEEECCceEEEecC--CCCeEEEEECCCcccceEEe
Confidence 00 112233344 455555 48999999999998776665
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.06 E-value=0.0012 Score=60.40 Aligned_cols=146 Identities=10% Similarity=0.123 Sum_probs=75.0
Q ss_pred cEEEE-EccCcEEEEEeCCCC---CeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceE
Q 040693 206 DIVVA-VQKSGFAWALDRDSG---SLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGW 279 (382)
Q Consensus 206 ~~v~~-~~~~g~l~ald~~tG---~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v 279 (382)
..+++ ...++.+..+|..+| +......... ......+ ++..+|++.. ..+.|
T Consensus 96 ~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~----------------~~~~v 153 (343)
T 1ri6_A 96 QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD------GCHSANISPDNRTLWVPAL----------------KQDRI 153 (343)
T ss_dssp SEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT------TBCCCEECTTSSEEEEEEG----------------GGTEE
T ss_pred CEEEEEecCCCeEEEEECCCCccccccccccCCC------CceEEEECCCCCEEEEecC----------------CCCEE
Confidence 34544 445788888888434 3443333221 1122222 5667887631 34779
Q ss_pred EEEECCC-CcEEee----ecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCC--CCcEeE--EEe-cCCc-----
Q 040693 280 VAMDASN-GNVLWS----TADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVK--TGKILW--SYD-TGAT----- 342 (382)
Q Consensus 280 ~a~d~~t-G~~~W~----~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~--tG~ilw--~~~-~~~~----- 342 (382)
..+|+.+ |+..-. ...... .....+.+ ++.++|++.. .++.+..+|.+ +|+... ... .+..
T Consensus 154 ~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pdg~~l~~~~~-~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 231 (343)
T 1ri6_A 154 CLFTVSDDGHLVAQDPAEVTTVEG-AGPRHMVFHPNEQYAYCVNE-LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR 231 (343)
T ss_dssp EEEEECTTSCEEEEEEEEEECSTT-CCEEEEEECTTSSEEEEEET-TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCC
T ss_pred EEEEecCCCceeeecccccccCCC-CCcceEEECCCCCEEEEEeC-CCCEEEEEEecCCCCcEEEEeeccccCccccccC
Confidence 9999988 765432 222211 01112233 2456777653 47889999984 566532 222 1111
Q ss_pred eecceEE--eCCEEEEEeCceeEeecCCccCCCCC
Q 040693 343 IYGGASV--SNGCIYMGNGYKVTVGFGNKNFTSGT 375 (382)
Q Consensus 343 ~~~~p~~--~~g~lyv~~~~g~~~~~~~~~~~~g~ 375 (382)
......+ .+..||++......+.+|.++..+|+
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~ 266 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSV 266 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCC
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCc
Confidence 1112333 24578877754455667777644443
No 147
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.05 E-value=0.00055 Score=71.58 Aligned_cols=155 Identities=12% Similarity=0.124 Sum_probs=88.8
Q ss_pred eEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeee-CCeEEEEecCccccccccCCCCC
Q 040693 194 MMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATD-ERRIYTNIANSQHKNFNLKPSKN 272 (382)
Q Consensus 194 ~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~ 272 (382)
.+..+..+. ++.|++++.++-|+.+|..+++..+-.. +........+....+ ++.|++++
T Consensus 364 ~v~~i~~d~--~g~lWigt~~~Gl~~~~~~~~~~~~~~~--~~~~~~~~v~~i~~d~~g~lWigt--------------- 424 (781)
T 3v9f_A 364 VVSSVCDDG--QGKLWIGTDGGGINVFENGKRVAIYNKE--NRELLSNSVLCSLKDSEGNLWFGT--------------- 424 (781)
T ss_dssp CEEEEEECT--TSCEEEEEBSSCEEEEETTEEEEECC-------CCCSBEEEEEECTTSCEEEEE---------------
T ss_pred ceEEEEEcC--CCCEEEEeCCCcEEEEECCCCeEEEccC--CCCCCCcceEEEEECCCCCEEEEe---------------
Confidence 344444443 4678888866669999998776544321 111122233333333 67888873
Q ss_pred CCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecC-----Cceecc
Q 040693 273 STIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTG-----ATIYGG 346 (382)
Q Consensus 273 ~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~-----~~~~~~ 346 (382)
..+.|..+|+++++...-............+..+ ++.+|+++ .+.|+.+|+++++........ .....+
T Consensus 425 --~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt---~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 499 (781)
T 3v9f_A 425 --YLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGT---HAGVFVIDLASKKVIHHYDTSNSQLLENFVRS 499 (781)
T ss_dssp --TTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEE---TTEEEEEESSSSSCCEEECTTTSSCSCSCEEE
T ss_pred --ccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEE---CCceEEEeCCCCeEEecccCcccccccceeEE
Confidence 3467999999998765432211111112233344 58999998 478999999988765543322 111222
Q ss_pred eEE-eCCEEEEEeCceeEeecCCccCCCCC
Q 040693 347 ASV-SNGCIYMGNGYKVTVGFGNKNFTSGT 375 (382)
Q Consensus 347 p~~-~~g~lyv~~~~g~~~~~~~~~~~~g~ 375 (382)
... .+|+|++++..+. ++.++..+++
T Consensus 500 i~~d~~g~lWigt~~~G---l~~~~~~~~~ 526 (781)
T 3v9f_A 500 IAQDSEGRFWIGTFGGG---VGIYTPDMQL 526 (781)
T ss_dssp EEECTTCCEEEEESSSC---EEEECTTCCE
T ss_pred EEEcCCCCEEEEEcCCC---EEEEeCCCCe
Confidence 222 4789999987322 3556665543
No 148
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.05 E-value=0.00031 Score=67.76 Aligned_cols=221 Identities=13% Similarity=0.031 Sum_probs=113.2
Q ss_pred ceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCC
Q 040693 55 GSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDK 134 (382)
Q Consensus 55 g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (382)
+.|+.+|.+++++.-..... . . ...+.+.+++..++++...
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~-~-----------~--v~~~~~Spdg~~la~~s~~------------------------- 199 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP-Q-----------P--LMSPAWSPDGSKLAYVTFE------------------------- 199 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES-S-----------C--EEEEEECTTSSEEEEEECT-------------------------
T ss_pred ceEEEEcCCCCCCEEEeCCC-C-----------c--ceeeEEcCCCCEEEEEEec-------------------------
Confidence 68899998654433222111 0 0 1246778887777766532
Q ss_pred CCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccC
Q 040693 135 CIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKS 214 (382)
Q Consensus 135 ~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~ 214 (382)
.....|+.+|.++|+..--.... . ...-....++| ..+++....+
T Consensus 200 -----~~~~~i~~~d~~tg~~~~l~~~~-~---------------------------~~~~~~~spdg--~~la~~~~~~ 244 (415)
T 2hqs_A 200 -----SGRSALVIQTLANGAVRQVASFP-R---------------------------HNGAPAFSPDG--SKLAFALSKT 244 (415)
T ss_dssp -----TSSCEEEEEETTTCCEEEEECCS-S---------------------------CEEEEEECTTS--SEEEEEECTT
T ss_pred -----CCCcEEEEEECCCCcEEEeecCC-C---------------------------cccCEEEcCCC--CEEEEEEecC
Confidence 01258999999999876322111 1 11111223333 3344455544
Q ss_pred --cEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE
Q 040693 215 --GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL 290 (382)
Q Consensus 215 --g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~ 290 (382)
..|+.+|..+|+..--.... .....+.. ++..+++.... .....|+.+|+.+|+..
T Consensus 245 g~~~i~~~d~~~~~~~~l~~~~------~~~~~~~~spdg~~l~~~s~~--------------~g~~~i~~~d~~~~~~~ 304 (415)
T 2hqs_A 245 GSLNLYVMDLASGQIRQVTDGR------SNNTEPTWFPDSQNLAFTSDQ--------------AGRPQVYKVNINGGAPQ 304 (415)
T ss_dssp SSCEEEEEETTTCCEEECCCCS------SCEEEEEECTTSSEEEEEECT--------------TSSCEEEEEETTSSCCE
T ss_pred CCceEEEEECCCCCEEeCcCCC------CcccceEECCCCCEEEEEECC--------------CCCcEEEEEECCCCCEE
Confidence 45999999998763221111 12222332 55656655321 11236999999998754
Q ss_pred eeecCCCCCCCCcceEE--eCCEEEEeeec-CCCcEEEEeCCCCcEeEEEecCCceecceEEe-CC-EEEEEeCceeEee
Q 040693 291 WSTADPSNGTAPGPVTV--ANGVLFGGSTY-RQGPIYAMDVKTGKILWSYDTGATIYGGASVS-NG-CIYMGNGYKVTVG 365 (382)
Q Consensus 291 W~~~~~~~~~~~~~~~~--~~~~v~~~~~~-~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~-~g-~lyv~~~~g~~~~ 365 (382)
-...... ....+.+ ++..++..... ....|+.+|.++|++.. .... ....++... ++ .|+.++.++....
T Consensus 305 ~l~~~~~---~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~-~~~~~~~~spdg~~l~~~s~~~~~~~ 379 (415)
T 2hqs_A 305 RITWEGS---QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSST-FLDETPSLAPNGTMVIYSSSQGMGSV 379 (415)
T ss_dssp ECCCSSS---EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCCS-SSCEEEEECTTSSEEEEEEEETTEEE
T ss_pred EEecCCC---cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecCC-CCcCCeEEcCCCCEEEEEEcCCCccE
Confidence 2221111 1112223 34556655531 12589999999998742 2222 233344442 44 4555555443334
Q ss_pred cCCccCCCC
Q 040693 366 FGNKNFTSG 374 (382)
Q Consensus 366 ~~~~~~~~g 374 (382)
+|.++..++
T Consensus 380 l~~~d~~g~ 388 (415)
T 2hqs_A 380 LNLVSTDGR 388 (415)
T ss_dssp EEEEETTSC
T ss_pred EEEEECCCC
Confidence 555555433
No 149
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.04 E-value=0.0012 Score=60.54 Aligned_cols=108 Identities=13% Similarity=0.070 Sum_probs=73.1
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
...++.+..++.+..+|..+++.+..+..-. .......+ ++..++.+ ..++.|..+
T Consensus 185 ~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~-----~~v~~~~~s~~~~~l~s~-----------------s~Dg~i~iw 242 (340)
T 4aow_A 185 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHT-----GYLNTVTVSPDGSLCASG-----------------GKDGQAMLW 242 (340)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEECCCS-----SCEEEEEECTTSSEEEEE-----------------ETTCEEEEE
T ss_pred CcEEEEEcCCCEEEEEECCCCceeeEecCCC-----CcEEEEEECCCCCEEEEE-----------------eCCCeEEEE
Confidence 4566677889999999999998887765321 12222222 44555554 345889999
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEE-eCCEEEEeeecCCCcEEEEeCCCCcEeEEEec
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTV-ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDT 339 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~ 339 (382)
|..+++.+........ ...+.. .++.+++++. ++.|..+|.++++.+++.+.
T Consensus 243 d~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~--d~~i~iwd~~~~~~~~~~~~ 295 (340)
T 4aow_A 243 DLNEGKHLYTLDGGDI---INALCFSPNRYWLCAAT--GPSIKIWDLEGKIIVDELKQ 295 (340)
T ss_dssp ETTTTEEEEEEECSSC---EEEEEECSSSSEEEEEE--TTEEEEEETTTTEEEEEECC
T ss_pred EeccCceeeeecCCce---EEeeecCCCCceeeccC--CCEEEEEECCCCeEEEeccc
Confidence 9999999988775431 122222 3455556554 89999999999988888754
No 150
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.04 E-value=0.00016 Score=68.24 Aligned_cols=148 Identities=12% Similarity=0.021 Sum_probs=89.4
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+..|+++..++.+..+|..+++.+..++... .......+ ++..++++. ..++.|..+
T Consensus 151 g~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~-----~~v~~v~~s~~~~~~~~s~----------------~~dg~v~~w 209 (357)
T 4g56_B 151 GTQAVSGGKDFSVKVWDLSQKAVLKSYNAHS-----SEVNCVAACPGKDTIFLSC----------------GEDGRILLW 209 (357)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCS-----SCEEEEEECTTCSSCEEEE----------------ETTSCEEEC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEcCCC-----CCEEEEEEccCCCceeeee----------------ccCCceEEE
Confidence 3678888999999999999999998876422 12222222 333333332 235789999
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEE--eC-CEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEE-
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTV--AN-GVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYM- 356 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~--~~-~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv- 356 (382)
|+++++..-.............+.+ ++ .++..++ .++.|..+|..+++.+..+...........+ .++++++
T Consensus 210 d~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~--~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~las 287 (357)
T 4g56_B 210 DTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD--ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLAS 287 (357)
T ss_dssp CTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE--SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEE
T ss_pred ECCCCceeeeeeeccccccccchhhhhcccceEEEee--cccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEE
Confidence 9999987766554332111222333 23 3555555 4899999999999998887655443334444 2335444
Q ss_pred EeCceeEeecCCccCCCCCeEE
Q 040693 357 GNGYKVTVGFGNKNFTSGTSLY 378 (382)
Q Consensus 357 ~~~~g~~~~~~~~~~~~g~~l~ 378 (382)
++.+|. +.+|. ..+|+.+.
T Consensus 288 gs~D~~-i~iwd--~~~~~~~~ 306 (357)
T 4g56_B 288 ISEDCT-VAVLD--ADFSEVFR 306 (357)
T ss_dssp EETTSC-EEEEC--TTSCEEEE
T ss_pred EeCCCE-EEEEE--CCCCcEeE
Confidence 444444 55554 44566654
No 151
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.04 E-value=0.00013 Score=67.43 Aligned_cols=101 Identities=11% Similarity=0.102 Sum_probs=63.0
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-----eCCeEEEEecCccccccccCCCCCCCCCceE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-----DERRIYTNIANSQHKNFNLKPSKNSTIAGGW 279 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v 279 (382)
+..++++..++.+..+|..+++.++...... ....... ++..++++ ..++.|
T Consensus 180 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~~l~~~-----------------~~dg~i 236 (357)
T 3i2n_A 180 ERVVCAGYDNGDIKLFDLRNMALRWETNIKN------GVCSLEFDRKDISMNKLVAT-----------------SLEGKF 236 (357)
T ss_dssp CCEEEEEETTSEEEEEETTTTEEEEEEECSS------CEEEEEESCSSSSCCEEEEE-----------------ESTTEE
T ss_pred CCEEEEEccCCeEEEEECccCceeeecCCCC------ceEEEEcCCCCCCCCEEEEE-----------------CCCCeE
Confidence 4678888889999999999999887765432 1122222 34556555 345889
Q ss_pred EEEECCCCcEEeeec-----CCCCCCCCcceEEe-CC--EEEEeeecCCCcEEEEeCCCCc
Q 040693 280 VAMDASNGNVLWSTA-----DPSNGTAPGPVTVA-NG--VLFGGSTYRQGPIYAMDVKTGK 332 (382)
Q Consensus 280 ~a~d~~tG~~~W~~~-----~~~~~~~~~~~~~~-~~--~v~~~~~~~~g~l~~ld~~tG~ 332 (382)
..+|.++++...... .... ....+.+. ++ +++.++ .+|.|..+|..+++
T Consensus 237 ~i~d~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASVSEKAHKS--TVWQVRHLPQNRELFLTAG--GAGGLHLWKYEYPI 293 (357)
T ss_dssp EEEEEEEEETTTEEEEEEEECCSS--CEEEEEEETTEEEEEEEEE--TTSEEEEEEEECCS
T ss_pred EEEeCcCCCcccceeeeccCCCcC--CEEEEEECCCCCcEEEEEe--CCCcEEEeecCCCc
Confidence 999999887665543 2211 11222232 33 344444 58999999987653
No 152
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.03 E-value=0.0021 Score=57.70 Aligned_cols=126 Identities=11% Similarity=0.129 Sum_probs=71.0
Q ss_pred EEEEc-cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeee-CCeEEEEecCccccccccCCCCCCCCCceEEEEECC
Q 040693 208 VVAVQ-KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATD-ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS 285 (382)
Q Consensus 208 v~~~~-~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~ 285 (382)
+++.. .++.++.+|. +|+..- +..+. ......+...+ ++.+|++.. ..+.|..+|+
T Consensus 159 l~v~~~~~~~i~~~~~-~g~~~~-~~~~~---~~~~~~~i~~d~~g~l~v~~~----------------~~~~i~~~~~- 216 (300)
T 2qc5_A 159 LWFTENQNNSIGRITN-TGKLEE-YPLPT---NAAAPVGITSGNDGALWFVEI----------------MGNKIGRITT- 216 (300)
T ss_dssp EEEEETTTTEEEEECT-TCCEEE-EECSS---TTCCEEEEEECTTSSEEEEET----------------TTTEEEEECT-
T ss_pred EEEEecCCCeEEEECC-CCcEEE-eeCCC---CCCCcceEEECCCCCEEEEcc----------------CCCEEEEEcC-
Confidence 55544 4678999998 677653 33211 11122233333 567888732 2357999998
Q ss_pred CCcEEeeecCCCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC--ceecceEE-eCCEEEEEeC
Q 040693 286 NGNVLWSTADPSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA--TIYGGASV-SNGCIYMGNG 359 (382)
Q Consensus 286 tG~~~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~--~~~~~p~~-~~g~lyv~~~ 359 (382)
+|+..... .+........+.++ ++.+|+++. ..+.|+.+|+ +|++. .+..+. ....+.++ .+|+||+++.
T Consensus 217 ~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~-~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 217 TGEISEYD-IPTPNARPHAITAGKNSEIWFTEW-GANQIGRITN-DNTIQ-EYQLQTENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEET-TTTEEEEECT-TSCEE-EEECCSTTCCCCCEEECTTSCEEEECS
T ss_pred CCcEEEEE-CCCCCCCceEEEECCCCCEEEecc-CCCeEEEECC-CCcEE-EEECCccCCccceeEeCCCCCEEEEcc
Confidence 67655432 22111112234444 567888874 3589999998 57654 343432 22233344 3789999986
No 153
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.03 E-value=0.00079 Score=62.67 Aligned_cols=107 Identities=11% Similarity=0.009 Sum_probs=66.9
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+..+++++.|+.+..+|..+++.......... ........ ++..+..+ ..++.|..+
T Consensus 139 ~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~----~~i~~~~~~pdg~~lasg-----------------~~dg~i~iw 197 (343)
T 3lrv_A 139 TEYFIWADNRGTIGFQSYEDDSQYIVHSAKSD----VEYSSGVLHKDSLLLALY-----------------SPDGILDVY 197 (343)
T ss_dssp CCEEEEEETTCCEEEEESSSSCEEEEECCCSS----CCCCEEEECTTSCEEEEE-----------------CTTSCEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCcEEEEEecCCC----CceEEEEECCCCCEEEEE-----------------cCCCEEEEE
Confidence 56788888999999999999998655533211 11122222 44445444 346889999
Q ss_pred ECCCCcEE-eeecC-CCCCCCCcceEEe-CC-EEEEeeecCCCcEEEEeCCCCcEeEEE
Q 040693 283 DASNGNVL-WSTAD-PSNGTAPGPVTVA-NG-VLFGGSTYRQGPIYAMDVKTGKILWSY 337 (382)
Q Consensus 283 d~~tG~~~-W~~~~-~~~~~~~~~~~~~-~~-~v~~~~~~~~g~l~~ld~~tG~ilw~~ 337 (382)
|.++++.+ -+... ... ....+.+. ++ .++.++ ++.|...|..+++.+..+
T Consensus 198 d~~~~~~~~~~~~~~h~~--~v~~l~fs~~g~~l~s~~---~~~v~iwd~~~~~~~~~~ 251 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEA--KIKEVKFADNGYWMVVEC---DQTVVCFDLRKDVGTLAY 251 (343)
T ss_dssp ESSCTTSCCEECCCCTTS--CEEEEEECTTSSEEEEEE---SSBEEEEETTSSTTCBSS
T ss_pred ECCCCCCCccEEeccCCC--CEEEEEEeCCCCEEEEEe---CCeEEEEEcCCCCcceee
Confidence 99999876 55544 221 12223332 33 555555 559999999988776443
No 154
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.02 E-value=0.002 Score=59.90 Aligned_cols=121 Identities=9% Similarity=0.083 Sum_probs=69.1
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECC--CC-c
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS--NG-N 288 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~--tG-~ 288 (382)
.+.|+.+| +|+..-..... ....+.+. ++..+|+.. ...+.|+.+|.. +| +
T Consensus 160 ~~~l~~~~--~g~~~~~~~~~------~~~~~i~~s~dg~~lyv~~----------------~~~~~I~~~d~~~~~Gl~ 215 (326)
T 2ghs_A 160 AGSIYHVA--KGKVTKLFADI------SIPNSICFSPDGTTGYFVD----------------TKVNRLMRVPLDARTGLP 215 (326)
T ss_dssp CEEEEEEE--TTEEEEEEEEE------SSEEEEEECTTSCEEEEEE----------------TTTCEEEEEEBCTTTCCB
T ss_pred ceEEEEEe--CCcEEEeeCCC------cccCCeEEcCCCCEEEEEE----------------CCCCEEEEEEcccccCCc
Confidence 36799999 57654322110 01112222 455677763 224679999975 77 4
Q ss_pred E----EeeecCCCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEe---CCEEEEEeCc
Q 040693 289 V----LWSTADPSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVS---NGCIYMGNGY 360 (382)
Q Consensus 289 ~----~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~---~g~lyv~~~~ 360 (382)
. .+.. ..........+.++ ++.+|+++. ..+.|+.+|+ +|+++-++..+.....++++. ++.||+++..
T Consensus 216 ~~~~~~~~~-~~~~~~~p~gi~~d~~G~lwva~~-~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 216 TGKAEVFID-STGIKGGMDGSVCDAEGHIWNARW-GEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp SSCCEEEEE-CTTSSSEEEEEEECTTSCEEEEEE-TTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred ccCceEEEE-CCCCCCCCCeeEECCCCCEEEEEe-CCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 2 2321 11100011223344 567888774 3578999998 688888887766444555554 2689998765
Q ss_pred e
Q 040693 361 K 361 (382)
Q Consensus 361 g 361 (382)
+
T Consensus 293 ~ 293 (326)
T 2ghs_A 293 E 293 (326)
T ss_dssp T
T ss_pred C
Confidence 4
No 155
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.02 E-value=0.00022 Score=65.73 Aligned_cols=138 Identities=7% Similarity=-0.039 Sum_probs=78.2
Q ss_pred EEEEccCcEEEEEeCCC-CCeeeeeccCCCCCCCCcccceee---eCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 208 VVAVQKSGFAWALDRDS-GSLIWSMEAGPGGLGGGAMWGAAT---DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 208 v~~~~~~g~l~ald~~t-G~~~W~~~~~~~~~~g~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
++++..++.+..+|..+ ++.......... ......... ++..++++ ..++.+..+|
T Consensus 163 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---~~~i~~i~~~~~~~~~l~~~-----------------~~dg~i~i~~ 222 (342)
T 1yfq_A 163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGL---KYQIRDVALLPKEQEGYACS-----------------SIDGRVAVEF 222 (342)
T ss_dssp EEEEESTTEEEEEESSCCTTCCCEEEECSC---SSCEEEEEECSGGGCEEEEE-----------------ETTSEEEEEE
T ss_pred EEEEeCCCeEEEEECCccccccceeeecCC---CCceeEEEECCCCCCEEEEE-----------------ecCCcEEEEE
Confidence 88888899999999998 765433322110 011122222 33455554 3357788877
Q ss_pred CCCC------cEEeeecCCCCC-------CCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecC-Cceecce
Q 040693 284 ASNG------NVLWSTADPSNG-------TAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTG-ATIYGGA 347 (382)
Q Consensus 284 ~~tG------~~~W~~~~~~~~-------~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~-~~~~~~p 347 (382)
..++ +.+......... .....+.+ ++.+++.++ .+|.|+.+|..+++.+..+... .....+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~ 300 (342)
T 1yfq_A 223 FDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG--SDGIISCWNLQTRKKIKNFAKFNEDSVVKI 300 (342)
T ss_dssp CCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE--TTSCEEEEETTTTEEEEECCCCSSSEEEEE
T ss_pred EcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEec--CCceEEEEcCccHhHhhhhhcccCCCceEe
Confidence 7776 666665543210 01122223 245666666 4899999999999999887654 3333334
Q ss_pred EEeCCEEEE-EeCceeEeecCC
Q 040693 348 SVSNGCIYM-GNGYKVTVGFGN 368 (382)
Q Consensus 348 ~~~~g~lyv-~~~~g~~~~~~~ 368 (382)
. .++++++ ++.+|.....+.
T Consensus 301 ~-~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 301 A-CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp E-ECSSEEEEEEECTHHHHCSS
T ss_pred c-CCCCeEEEEecCCccccccc
Confidence 4 5555555 444543134444
No 156
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.00 E-value=0.001 Score=63.73 Aligned_cols=150 Identities=17% Similarity=0.129 Sum_probs=92.2
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+..+++++.++.+..+|..+++.++.+.... .......... ++..++.+ ..++.|..+
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~-----------------~~dg~i~iw 241 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTLERLQIIENSP---RHGAVSSICIDEECCVLILG-----------------TTRGIIDIW 241 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTCCEEEEEECCG---GGCCEEEEEECTTSCEEEEE-----------------ETTSCEEEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeeEEEccCC---CCCceEEEEECCCCCEEEEE-----------------cCCCeEEEE
Confidence 4678889999999999999999999887521 0112222222 45555555 345889999
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEE-----eCC-EEEEeeecCCCcEEEEeCCCCcEeEEEecCC---------------
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTV-----ANG-VLFGGSTYRQGPIYAMDVKTGKILWSYDTGA--------------- 341 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~-----~~~-~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~--------------- 341 (382)
|.++++.+-+....... ....+.. .++ +++.++ .++.|..+|..+++.+..+....
T Consensus 242 d~~~~~~~~~~~~~~~~-~v~~~~~~~~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (437)
T 3gre_A 242 DIRFNVLIRSWSFGDHA-PITHVEVCQFYGKNSVIVVGGS--SKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL 318 (437)
T ss_dssp ETTTTEEEEEEBCTTCE-EEEEEEECTTTCTTEEEEEEES--TTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG
T ss_pred EcCCccEEEEEecCCCC-ceEEEEeccccCCCccEEEEEc--CCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccc
Confidence 99999988776543210 0111101 123 444444 58999999999999888776321
Q ss_pred -----------ceecceEEeCCEEEEEeCceeEeecCCccCCCCCeEEE
Q 040693 342 -----------TIYGGASVSNGCIYMGNGYKVTVGFGNKNFTSGTSLYA 379 (382)
Q Consensus 342 -----------~~~~~p~~~~g~lyv~~~~g~~~~~~~~~~~~g~~l~~ 379 (382)
....+..+.+++++++.+....+.+|.+. +++.+..
T Consensus 319 ~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~--~~~~~~~ 365 (437)
T 3gre_A 319 EELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLN--ELSSSKA 365 (437)
T ss_dssp GGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETT--CGGGCEE
T ss_pred ccceecccccCCceEEEEECCceEEEecCCCCeEEEEECC--CcccceE
Confidence 01223344567766666544445666554 4554433
No 157
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.99 E-value=0.0024 Score=58.85 Aligned_cols=106 Identities=7% Similarity=0.030 Sum_probs=67.0
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
...++.+..|+.+..+|..+++..-.+..-. ........ ++..+..+ ..++.|..+
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~-----~~v~~~~~sp~g~~l~s~-----------------~~dg~i~iw 223 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEADFIGHN-----SNINTLTASPDGTLIASA-----------------GKDGEIMLW 223 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEEEECCCC-----SCEEEEEECTTSSEEEEE-----------------ETTCEEEEE
T ss_pred ccEEEEEeCCCEEEEEECCcchhheeecCCC-----CcEEEEEEcCCCCEEEEE-----------------eCCCeEEEE
Confidence 3468888899999999999888766554211 12222222 44455544 345889999
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEEe-CC-EEEEeeecCCCcEEEEeCCCCcEeEEEe
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTVA-NG-VLFGGSTYRQGPIYAMDVKTGKILWSYD 338 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~~-~~-~v~~~~~~~~g~l~~ld~~tG~ilw~~~ 338 (382)
|.++++.+.+...... ...+.+. ++ .+..+. ...+..++.++++.+....
T Consensus 224 d~~~~~~~~~~~~~~~---v~~~~~sp~~~~la~~~---~~~i~v~~~~~~~~~~~~~ 275 (319)
T 3frx_A 224 NLAAKKAMYTLSAQDE---VFSLAFSPNRYWLAAAT---ATGIKVFSLDPQYLVDDLR 275 (319)
T ss_dssp ETTTTEEEEEEECCSC---EEEEEECSSSSEEEEEE---TTEEEEEEETTEEEEEEEC
T ss_pred ECCCCcEEEEecCCCc---EEEEEEcCCCCEEEEEc---CCCcEEEEeCcCeeeeccC
Confidence 9999999988875431 1222232 33 444444 5668888888777766654
No 158
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.98 E-value=0.0037 Score=56.03 Aligned_cols=128 Identities=8% Similarity=-0.006 Sum_probs=71.3
Q ss_pred cEEEEE-ccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeee-CCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 206 DIVVAV-QKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATD-ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 206 ~~v~~~-~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
+.++++ ..++.++.+|. +|+...... .. ........+.+ ++.+|++.. ..+.|+.+|
T Consensus 110 g~l~v~~~~~~~i~~~d~-~g~~~~~~~-~~---~~~~~~~i~~~~~g~l~v~~~----------------~~~~i~~~~ 168 (299)
T 2z2n_A 110 GDIWFTEMNGNRIGRITD-DGKIREYEL-PN---KGSYPSFITLGSDNALWFTEN----------------QNNAIGRIT 168 (299)
T ss_dssp SCEEEEETTTTEEEEECT-TCCEEEEEC-SS---TTCCEEEEEECTTSCEEEEET----------------TTTEEEEEC
T ss_pred CCEEEEecCCceEEEECC-CCCEEEecC-CC---CCCCCceEEEcCCCCEEEEeC----------------CCCEEEEEc
Confidence 345554 45678999999 777653221 11 11122233333 567887632 246799999
Q ss_pred CCCCcEEeeecCCCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC--ceecceEE-eCCEEEEEeC
Q 040693 284 ASNGNVLWSTADPSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA--TIYGGASV-SNGCIYMGNG 359 (382)
Q Consensus 284 ~~tG~~~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~--~~~~~p~~-~~g~lyv~~~ 359 (382)
+ +|+.... ..+........+.++ ++.+|+++. ..+.|+.+|+ +|++.- +..+. .......+ .+|+||+++.
T Consensus 169 ~-~g~~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~-~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 169 E-SGDITEF-KIPTPASGPVGITKGNDDALWFVEI-IGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp T-TCCEEEE-ECSSTTCCEEEEEECTTSSEEEEET-TTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEET
T ss_pred C-CCcEEEe-eCCCCCCcceeEEECCCCCEEEEcc-CCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEecc
Confidence 9 8877642 222211111233444 467888763 3678999999 787543 33332 11223333 3688999874
No 159
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=97.98 E-value=0.00044 Score=68.34 Aligned_cols=205 Identities=18% Similarity=0.227 Sum_probs=109.9
Q ss_pred ceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCc-------
Q 040693 143 NSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSG------- 215 (382)
Q Consensus 143 g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g------- 215 (382)
..|.|++++ |+.+|+..+.... . ......++.+++++.+| ...|++.+.+|
T Consensus 151 ~~l~aY~ld-G~~LW~idlg~ni-~------------------aGa~yt~~~V~DlDGDG--kaEIvv~TadGt~dg~g~ 208 (591)
T 2zux_A 151 VLIDAYKLD-GTKLWRINLGKNI-R------------------AGAHYTQFMVYDLDGDG--KAEVAMKTADGTKDGTGK 208 (591)
T ss_dssp CEEEEECTT-SCEEEEEECCTTS-C------------------CSTTSCCCEEECSSSSS--SCEEEEEECTTCBCTTSC
T ss_pred cEEEEEECC-CCEEEEEcCCCCc-c------------------cccccCceeEEEcCCCC--cceEEEEccCCcccCCce
Confidence 579999985 9999998876431 0 00122578889988888 45566654433
Q ss_pred ---------------------EEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCcccc-cccc-CCC
Q 040693 216 ---------------------FAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHK-NFNL-KPS 270 (382)
Q Consensus 216 ---------------------~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~-~~~~-~~~ 270 (382)
.|..||..||+.+++.+..++.. ....|+... .-++..+....-++. +..+ ..+
T Consensus 209 ~ig~~~~dyrn~~g~il~GpEyL~vfdG~TG~~l~~~~~~p~rg-~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rG 287 (591)
T 2zux_A 209 VIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTANFEPARG-NVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRG 287 (591)
T ss_dssp BCSSTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEECSSCCC-CGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEEC
T ss_pred EecccccccccccceeecCCcEEEEEeCCCCCEEecccCCCCCC-cccccccccccccccceeeEEECCCCCceEEEecc
Confidence 49999999999999988654211 111222110 001111121111110 0000 000
Q ss_pred CCCCCCceEEEEECCCCc--EEeeecCCCCC------CCCcceEEe---C-C--EEEEeeecCCCcEEEEeCCCCcEeEE
Q 040693 271 KNSTIAGGWVAMDASNGN--VLWSTADPSNG------TAPGPVTVA---N-G--VLFGGSTYRQGPIYAMDVKTGKILWS 336 (382)
Q Consensus 271 ~~~~~~g~v~a~d~~tG~--~~W~~~~~~~~------~~~~~~~~~---~-~--~v~~~~~~~~g~l~~ld~~tG~ilw~ 336 (382)
-.....|.|+|.++++ ++|+....... .....+.+. + + -|+.++ .++| .+|+.||.
T Consensus 288 --yYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs-------~~iD-~dG~~L~s 357 (591)
T 2zux_A 288 --YYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGS-------MAVD-HDGKGMYS 357 (591)
T ss_dssp --CSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETT-------EEEC-TTSCEEEE
T ss_pred --ccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEee-------eEEC-CCCCEeee
Confidence 0122469999999996 59999875421 011222221 1 1 222222 2567 67999999
Q ss_pred EecCCceecce-----EEeCCEEEEEeCceeE-eecCCccCCCCCeEEEE
Q 040693 337 YDTGATIYGGA-----SVSNGCIYMGNGYKVT-VGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 337 ~~~~~~~~~~p-----~~~~g~lyv~~~~g~~-~~~~~~~~~~g~~l~~~ 380 (382)
..++.+-.... -..+=.+|.....+.. .+..-.|+.||++||.+
T Consensus 358 t~~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~ 407 (591)
T 2zux_A 358 TGLGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGV 407 (591)
T ss_dssp CSCCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEE
T ss_pred CCCCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEc
Confidence 98765321111 1122356766554211 01112588999999976
No 160
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=97.96 E-value=0.0046 Score=61.41 Aligned_cols=224 Identities=17% Similarity=0.185 Sum_probs=114.2
Q ss_pred ceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCC---eEEEEcCCCCCCCcchhhccc-ccCCCCCC
Q 040693 55 GSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRN---HVYIATGNLYSVPLHIRQCQE-ENNQTTPT 130 (382)
Q Consensus 55 g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~v~v~~~~~~~~~~~~~~~~~-~~~~~~~~ 130 (382)
..|.|+++ +|+++|+.++.+.. .+| ..+.+..++|-+++ -|++.+.+... .+ +....-+.
T Consensus 155 ~~l~aY~l-dG~~LW~idlg~Ni------~aG-ahyt~~~V~DlDGDGkaEIvv~TadGt~--------dg~g~vigd~~ 218 (620)
T 2zuy_A 155 VLIDAYKL-DGTFLWRINLGRNI------RAG-AHYTQFMVYDLDGDGKAEIAMKTADGTT--------DGKGHIIGDEQ 218 (620)
T ss_dssp CEEEEECT-TSCEEEEEECCTTS------CCS-TTSCCCEEECSSSSSSCEEEEEECTTCB--------CTTSCBCSCTT
T ss_pred cEEEEEEC-CCCEEEEEcCCCCc------ccc-cccCceeEEEcCCCCcceEEEEccCCcc--------cCcceeecccc
Confidence 37899998 59999999885421 111 11122334444433 46665543110 00 00000000
Q ss_pred ----CCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCc----ccccccccCCCCCCCCCCCCCCCCCCCceEEEe-eeC
Q 040693 131 ----SPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYD----VWFGACNWYLNPNCPPGPSPDADFGEAPMMLSM-YRN 201 (382)
Q Consensus 131 ----~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~ 201 (382)
..++++..+ ...|..+|.+||+.+++.++.+.. .|. . .++-.....++.+ ..+
T Consensus 219 ~dyr~~~g~il~G--~eyL~vfdG~TG~~l~t~~~~p~rg~~~~WG------D----------~yGnR~drf~~~vayLD 280 (620)
T 2zuy_A 219 ADFRNEQGRILSG--PEYLTVFKGETGEALTTVEYEPPRGKLEDWG------D----------GYGNRMDRFLAGTAYLD 280 (620)
T ss_dssp CCCBCTTSCBCSS--CCEEEEEETTTCCEEEEEECSSCCCSGGGGT------S----------SSSTTTTCEEEEEECTT
T ss_pred cccccccceEecC--CeEEEEEcCCCcceeeecccCCCcCcccccc------c----------cccccccccceeEEecC
Confidence 013333332 367999999999999999874321 110 0 0111112222222 344
Q ss_pred ceeecEEEEEc---cCcEEEEEeCCCCC--eeeeeccCCCC---CCCCcccceee-----e-CCeEEEEecCcccccccc
Q 040693 202 KVKHDIVVAVQ---KSGFAWALDRDSGS--LIWSMEAGPGG---LGGGAMWGAAT-----D-ERRIYTNIANSQHKNFNL 267 (382)
Q Consensus 202 g~~~~~v~~~~---~~g~l~ald~~tG~--~~W~~~~~~~~---~~g~~~~~~~~-----~-~~~v~~~~~~~~~~~~~~ 267 (382)
|. ...++++. ....+.|+|..+|+ .+|+++...+. ..+.....+.+ | ..-|+++
T Consensus 281 G~-~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~G----------- 348 (620)
T 2zuy_A 281 GE-RPSLVMARGYYTRTVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYG----------- 348 (620)
T ss_dssp CC--CEEEEEECSSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEET-----------
T ss_pred CC-CceEEEecCcccceeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEEe-----------
Confidence 54 33444432 23579999998884 79999875321 11111112211 1 1223321
Q ss_pred CCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEe-------CCEEEEeeec--CCCcEEEEeCCCCcEeEEEe
Q 040693 268 KPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVA-------NGVLFGGSTY--RQGPIYAMDVKTGKILWSYD 338 (382)
Q Consensus 268 ~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~-------~~~v~~~~~~--~~g~l~~ld~~tG~ilw~~~ 338 (382)
. .++| .+|+.+|+....- ...+.+. +-.||.+... ........|++||+++|+.+
T Consensus 349 ----------s-~~iD-~dG~~L~st~~gH----GDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~~ 412 (620)
T 2zuy_A 349 ----------A-MAVD-HDGTGLYSTGLGH----GDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGVH 412 (620)
T ss_dssp ----------T-EEEC-TTSSEEEECSCCC----CSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred ----------e-eEEC-CCCCEEeecCCCC----CceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEec
Confidence 1 3566 7899999988633 2222221 1245555421 01256678999999999997
Q ss_pred cC
Q 040693 339 TG 340 (382)
Q Consensus 339 ~~ 340 (382)
..
T Consensus 413 ~~ 414 (620)
T 2zuy_A 413 AG 414 (620)
T ss_dssp CS
T ss_pred Cc
Confidence 54
No 161
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.95 E-value=0.0011 Score=61.09 Aligned_cols=148 Identities=9% Similarity=0.050 Sum_probs=86.9
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
++.|..+|..+|+.+-++......+. -..+..+ +..++.+..|+.+..+|
T Consensus 86 D~~v~~wd~~~~~~~~~~~~h~~~v~---------------------------~~~~~~~---~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVGHKSDVM---------------------------SVDIDKK---ASMIISGSRDKTIKVWT 135 (319)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEE---------------------------EEEECTT---SCEEEEEETTSCEEEEE
T ss_pred CCEEEEEECCCCCeeEEEccCCCcEE---------------------------EEEEcCC---CCEEEEEeCCCeEEEEE
Confidence 38999999999998876654332111 0111111 46788888999999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceee----eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCC
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAAT----DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPS 297 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~ 297 (382)
.. ++.+-....... ......+.+.. +...++.+ ..++.|..+|.++++..-+.....
T Consensus 136 ~~-~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~l~s~-----------------~~d~~i~~wd~~~~~~~~~~~~h~ 196 (319)
T 3frx_A 136 IK-GQCLATLLGHND-WVSQVRVVPNEKADDDSVTIISA-----------------GNDKMVKAWNLNQFQIEADFIGHN 196 (319)
T ss_dssp TT-SCEEEEECCCSS-CEEEEEECCC------CCEEEEE-----------------ETTSCEEEEETTTTEEEEEECCCC
T ss_pred CC-CCeEEEEeccCC-cEEEEEEccCCCCCCCccEEEEE-----------------eCCCEEEEEECCcchhheeecCCC
Confidence 86 444443331110 00000111100 12234433 345889999999998876665433
Q ss_pred CCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCc
Q 040693 298 NGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGAT 342 (382)
Q Consensus 298 ~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~ 342 (382)
.. ...+.+ ++.+++.++ .++.|...|..+++.+.++.....
T Consensus 197 ~~--v~~~~~sp~g~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~ 239 (319)
T 3frx_A 197 SN--INTLTASPDGTLIASAG--KDGEIMLWNLAAKKAMYTLSAQDE 239 (319)
T ss_dssp SC--EEEEEECTTSSEEEEEE--TTCEEEEEETTTTEEEEEEECCSC
T ss_pred Cc--EEEEEEcCCCCEEEEEe--CCCeEEEEECCCCcEEEEecCCCc
Confidence 21 122223 234666666 489999999999999988876544
No 162
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.95 E-value=0.0084 Score=55.10 Aligned_cols=127 Identities=11% Similarity=0.034 Sum_probs=73.8
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
..++.+|..+. .|+.-.+.+ ........+..++.||+..+.... ......+..+|+.+. .|+.-
T Consensus 117 ~~~~~~d~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~----------~~~~~~~~~yd~~~~--~W~~~ 180 (315)
T 4asc_A 117 DSVMCYDRLSF--KWGESDPLP--YVVYGHTVLSHMDLVYVIGGKGSD----------RKCLNKMCVYDPKKF--EWKEL 180 (315)
T ss_dssp CCEEEEETTTT--EEEECCCCS--SCCBSCEEEEETTEEEEECCBCTT----------SCBCCCEEEEETTTT--EEEEC
T ss_pred ceEEEECCCCC--cEeECCCCC--CcccceeEEEECCEEEEEeCCCCC----------CcccceEEEEeCCCC--eEEEC
Confidence 45899999876 487654321 122333344467788876443110 123466999999876 57753
Q ss_pred --CCCCCCCCcceEEeCCEEEEeeecCC----CcEEEEeCCCCcEeEEEecC--Cc-eecceEEeCCEEEEEeCc
Q 040693 295 --DPSNGTAPGPVTVANGVLFGGSTYRQ----GPIYAMDVKTGKILWSYDTG--AT-IYGGASVSNGCIYMGNGY 360 (382)
Q Consensus 295 --~~~~~~~~~~~~~~~~~v~~~~~~~~----g~l~~ld~~tG~ilw~~~~~--~~-~~~~p~~~~g~lyv~~~~ 360 (382)
.+.+. ......+.++.+|+...... ..++++|+++. .|+.-.+ .. ...+.++.+++||+..+.
T Consensus 181 ~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 252 (315)
T 4asc_A 181 APMQTAR-SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN--KWAPFEAFPQERSSLSLVSLVGTLYAIGGF 252 (315)
T ss_dssp CCCSSCC-BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEEEEEE
T ss_pred CCCCCch-hceEEEEECCEEEEEeccCCCCccceEEEEECCCC--eEEECCCCCCcccceeEEEECCEEEEECCc
Confidence 33322 23334455777666542111 25899999876 5765332 22 334456689999998664
No 163
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.94 E-value=0.0022 Score=59.22 Aligned_cols=129 Identities=16% Similarity=0.133 Sum_probs=74.3
Q ss_pred CcEEEEEeCCCCCeeeeec-cCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCC---
Q 040693 214 SGFAWALDRDSGSLIWSME-AGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNG--- 287 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~-~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG--- 287 (382)
.+.++.+|.++|+..-... .. ...+.++ +++.+|++.. ..+.|+.+|..+.
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~~~-------~p~gia~~~dg~~lyv~d~----------------~~~~I~~~~~~~~~~~ 220 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKELH-------VPGGAEVSADSSFVLVAEF----------------LSHQIVKYWLEGPKKG 220 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEEES-------CCCEEEECTTSSEEEEEEG----------------GGTEEEEEESSSTTTT
T ss_pred CceEEEEeCCCCEEEEeccCCc-------cCcceEECCCCCEEEEEeC----------------CCCeEEEEECCCCcCC
Confidence 3789999998886532221 11 1112233 4457888732 2367999998753
Q ss_pred cEEeeecCCCCCCCCcceEEe-CCEEEEeeec---------CCCcEEEEeCCCCcEeEEEecCCc----eecceEEeCCE
Q 040693 288 NVLWSTADPSNGTAPGPVTVA-NGVLFGGSTY---------RQGPIYAMDVKTGKILWSYDTGAT----IYGGASVSNGC 353 (382)
Q Consensus 288 ~~~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~---------~~g~l~~ld~~tG~ilw~~~~~~~----~~~~p~~~~g~ 353 (382)
+..--...+. ..-+.++ ++.+|++... ..+.|+.+|++ |+++-.+..+.+ ...+.+..+++
T Consensus 221 ~~~~~~~~~g----P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~~g~ 295 (322)
T 2fp8_A 221 TAEVLVKIPN----PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEHDGL 295 (322)
T ss_dssp CEEEEEECSS----EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEETTE
T ss_pred ccceEEeCCC----CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEeCCE
Confidence 2221112211 1223444 4678888751 03679999985 998888876542 22334557999
Q ss_pred EEEEeCceeEeecCCcc
Q 040693 354 IYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 354 lyv~~~~g~~~~~~~~~ 370 (382)
|||++.....+..+.+.
T Consensus 296 L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 296 LYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEECSSCSEEEEEEC-
T ss_pred EEEeecCCCceEEEecc
Confidence 99998655544444443
No 164
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.94 E-value=0.0025 Score=57.75 Aligned_cols=99 Identities=10% Similarity=0.144 Sum_probs=63.5
Q ss_pred cEEEEEccCcEEEEEeCC-CCCe---eeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEE
Q 040693 206 DIVVAVQKSGFAWALDRD-SGSL---IWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWV 280 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~-tG~~---~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~ 280 (382)
..+++...++.++.+|.. +|++ .-.+... .+ ...+.+. .++.+|++. .+.|.
T Consensus 184 ~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~----~~-~p~~i~~d~~G~l~v~~------------------~~~v~ 240 (296)
T 3e5z_A 184 NLLVSDTGDNATHRYCLNARGETEYQGVHFTVE----PG-KTDGLRVDAGGLIWASA------------------GDGVH 240 (296)
T ss_dssp CEEEEETTTTEEEEEEECSSSCEEEEEEEECCS----SS-CCCSEEEBTTSCEEEEE------------------TTEEE
T ss_pred CEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCC----CC-CCCeEEECCCCCEEEEc------------------CCeEE
Confidence 344666777889999986 6765 2222111 11 1123333 356788873 36799
Q ss_pred EEECCCCcEEeeecCCCCCCCCcceEEe---CCEEEEeeecCCCcEEEEeCCCCcEe
Q 040693 281 AMDASNGNVLWSTADPSNGTAPGPVTVA---NGVLFGGSTYRQGPIYAMDVKTGKIL 334 (382)
Q Consensus 281 a~d~~tG~~~W~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~g~l~~ld~~tG~il 334 (382)
.+|++ |+.+-++..+.. ...+.+. ++.+|+++ .+.|+.+++++.++.
T Consensus 241 ~~~~~-g~~~~~~~~~~~---~~~~~f~~~d~~~L~v~t---~~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 241 VLTPD-GDELGRVLTPQT---TSNLCFGGPEGRTLYMTV---STEFWSIETNVRGLE 290 (296)
T ss_dssp EECTT-SCEEEEEECSSC---CCEEEEESTTSCEEEEEE---TTEEEEEECSCCBCC
T ss_pred EECCC-CCEEEEEECCCC---ceeEEEECCCCCEEEEEc---CCeEEEEEccccccc
Confidence 99986 888877776653 2333442 35799988 679999999988764
No 165
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.93 E-value=0.0032 Score=57.95 Aligned_cols=125 Identities=12% Similarity=0.163 Sum_probs=72.4
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
..++.+|..+. .|+.-.+.+ ........++.++.||+..+.... .....+..+|+++. .|+.-
T Consensus 165 ~~~~~yd~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~-----------~~~~~~~~yd~~~~--~W~~~ 227 (315)
T 4asc_A 165 NKMCVYDPKKF--EWKELAPMQ--TARSLFGATVHDGRIIVAAGVTDT-----------GLTSSAEVYSITDN--KWAPF 227 (315)
T ss_dssp CCEEEEETTTT--EEEECCCCS--SCCBSCEEEEETTEEEEEEEECSS-----------SEEEEEEEEETTTT--EEEEE
T ss_pred ceEEEEeCCCC--eEEECCCCC--CchhceEEEEECCEEEEEeccCCC-----------CccceEEEEECCCC--eEEEC
Confidence 46999999865 687654321 122333344467788876443110 12346999999887 67754
Q ss_pred C--CCCCCCCcceEEeCCEEEEeeecC-------------CCcEEEEeCCCCcEeEEEecCC-ceecceEEeCCEEEEEe
Q 040693 295 D--PSNGTAPGPVTVANGVLFGGSTYR-------------QGPIYAMDVKTGKILWSYDTGA-TIYGGASVSNGCIYMGN 358 (382)
Q Consensus 295 ~--~~~~~~~~~~~~~~~~v~~~~~~~-------------~g~l~~ld~~tG~ilw~~~~~~-~~~~~p~~~~g~lyv~~ 358 (382)
. +... ........++.+|+..... ...++++|+++. .|+.-.+. ....+.++.+++||+..
T Consensus 228 ~~~p~~r-~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~~r~~~~~~~~~~~l~v~~ 304 (315)
T 4asc_A 228 EAFPQER-SSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK--KWEGVLREIAYAAGATFLPVRLNVLR 304 (315)
T ss_dssp CCCSSCC-BSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT--EEEEEESCSSCCSSCEEEEEEECGGG
T ss_pred CCCCCcc-cceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC--hhhhhccCCcCccceEEeCCEEEEEE
Confidence 3 3322 2333445566666653200 134889999866 47654333 34456777889998864
Q ss_pred C
Q 040693 359 G 359 (382)
Q Consensus 359 ~ 359 (382)
.
T Consensus 305 ~ 305 (315)
T 4asc_A 305 L 305 (315)
T ss_dssp S
T ss_pred e
Confidence 4
No 166
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.92 E-value=0.0017 Score=60.98 Aligned_cols=219 Identities=12% Similarity=0.047 Sum_probs=121.8
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|..+ +.+-......... . ......+.+++..++.+..+
T Consensus 140 d~~i~iwd~~~-~~~~~~~~~~~~~--------~--~v~~~~~~~~~~~l~~~~~d------------------------ 184 (383)
T 3ei3_B 140 RGATTLRDFSG-SVIQVFAKTDSWD--------Y--WYCCVDVSVSRQMLATGDST------------------------ 184 (383)
T ss_dssp TTEEEEEETTS-CEEEEEECCCCSS--------C--CEEEEEEETTTTEEEEEETT------------------------
T ss_pred CCEEEEEECCC-CceEEEeccCCCC--------C--CeEEEEECCCCCEEEEECCC------------------------
Confidence 88999999875 4443333211100 0 01235566676777776553
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|. +++.+..+......+. -..+..++ ...++++..
T Consensus 185 ---------~~i~i~d~-~~~~~~~~~~h~~~v~---------------------------~~~~~~~~--~~~l~s~~~ 225 (383)
T 3ei3_B 185 ---------GRLLLLGL-DGHEIFKEKLHKAKVT---------------------------HAEFNPRC--DWLMATSSV 225 (383)
T ss_dssp ---------SEEEEEET-TSCEEEEEECSSSCEE---------------------------EEEECSSC--TTEEEEEET
T ss_pred ---------CCEEEEEC-CCCEEEEeccCCCcEE---------------------------EEEECCCC--CCEEEEEeC
Confidence 89999998 6888888765432111 11122222 237888889
Q ss_pred CcEEEEEeCCC----CCeeeeeccCCCCCCCCcccceee---eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCC
Q 040693 214 SGFAWALDRDS----GSLIWSMEAGPGGLGGGAMWGAAT---DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASN 286 (382)
Q Consensus 214 ~g~l~ald~~t----G~~~W~~~~~~~~~~g~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~t 286 (382)
|+.+..+|..+ ++.+...... ........ ++..++++ ..++.|..+|.++
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~~~~------~~v~~~~~s~~~~~~l~~~-----------------~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKNSYIAEMPHE------KPVNAAYFNPTDSTKLLTT-----------------DQRNEIRVYSSYD 282 (383)
T ss_dssp TSEEEEEEGGGCCSTTCEEEEEECS------SCEEEEEECTTTSCEEEEE-----------------ESSSEEEEEETTB
T ss_pred CCEEEEEeCCCCCcccceEEEecCC------CceEEEEEcCCCCCEEEEE-----------------cCCCcEEEEECCC
Confidence 99999999998 5555544321 12222222 33455544 3458899999999
Q ss_pred CcEEeeecCCCCCC--CCcc--eEE--eCCEEEEe-------eecCCCcEEEEeCCCCcEeEEEecCC--ceecceEE-e
Q 040693 287 GNVLWSTADPSNGT--APGP--VTV--ANGVLFGG-------STYRQGPIYAMDVKTGKILWSYDTGA--TIYGGASV-S 350 (382)
Q Consensus 287 G~~~W~~~~~~~~~--~~~~--~~~--~~~~v~~~-------~~~~~g~l~~ld~~tG~ilw~~~~~~--~~~~~p~~-~ 350 (382)
++..-+........ ...+ ... .+..+.+. +...++.|..+|..+|+.+.++.... ........ .
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~ 362 (383)
T 3ei3_B 283 WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSP 362 (383)
T ss_dssp TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECT
T ss_pred CccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEec
Confidence 98765544221000 0000 011 11222222 11148999999999999998887532 23333233 3
Q ss_pred CCEEEEEeCceeEeecCCcc
Q 040693 351 NGCIYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 351 ~g~lyv~~~~g~~~~~~~~~ 370 (382)
+++++++.++|. +.+|.++
T Consensus 363 ~g~~l~s~sd~~-i~iw~~~ 381 (383)
T 3ei3_B 363 TGDVLASGMGFN-ILIWNRE 381 (383)
T ss_dssp TSSEEEEEETTE-EEEEECC
T ss_pred CccEEEEecCCc-EEEEecC
Confidence 566666555544 5666654
No 167
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=97.92 E-value=0.0035 Score=62.54 Aligned_cols=62 Identities=18% Similarity=0.197 Sum_probs=38.1
Q ss_pred EEEEECCCC--cEEeeecCC-----CCCCCCcceEEeCC-EEEEeeec---------CCCcEEEEeCCCCcEeEEEecC
Q 040693 279 WVAMDASNG--NVLWSTADP-----SNGTAPGPVTVANG-VLFGGSTY---------RQGPIYAMDVKTGKILWSYDTG 340 (382)
Q Consensus 279 v~a~d~~tG--~~~W~~~~~-----~~~~~~~~~~~~~~-~v~~~~~~---------~~g~l~~ld~~tG~ilw~~~~~ 340 (382)
.+.||.++. +++|++... .....++.-...++ .++.-... ..++|.=++.++.+++|++.+.
T Consensus 472 ~y~ID~~~~Tv~~vw~y~~~~g~~~yS~~~gs~Q~L~nGN~li~~g~~~~~~~~g~~~~~~i~E~~~~~~evv~e~~~~ 550 (571)
T 3elq_A 472 EYKIDEKKGTVQQVWEYGKERGYDFYSPITSIIEYQADRNTMFGFGGSIHLFDVGQPTVGKLNEIDYKTKEVKVEIDVL 550 (571)
T ss_dssp EEEEETTTTEEEEEEEECGGGGGGGCCSSCCEEEEETTTTEEEEEEEEETTTSTTSEEEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEcCCCCEEEEEEEecCCCCCCcccccccccEECCCCCEEEEecccccccccCCCCceeEEEECCCCCEEEEEEEec
Confidence 456999977 899999521 11222333334554 44333210 0467888999888899998764
No 168
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.92 E-value=0.00041 Score=71.37 Aligned_cols=180 Identities=14% Similarity=0.094 Sum_probs=101.6
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
++.|..+|..+|+.+.++......+. -..+..+ +..|++++.|+.+..+|
T Consensus 451 Dg~v~vwd~~~~~~~~~~~~h~~~v~---------------------------~~~~s~~---~~~l~s~s~D~~i~iwd 500 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRFVGHTKDVL---------------------------SVAFSLD---NRQIVSASRDRTIKLWN 500 (694)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEE---------------------------EEEECTT---SSCEEEEETTSCEEEEC
T ss_pred CCcEEEEECCCCcceeEEeCCCCCEE---------------------------EEEEeCC---CCEEEEEeCCCEEEEEE
Confidence 38999999999998877654332111 0111222 35677888899999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceee--eC--CeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCC
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAAT--DE--RRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPS 297 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~--~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~ 297 (382)
... +........... .......... ++ ..++.+ ..++.|..+|+++++..-+.....
T Consensus 501 ~~~-~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~-----------------s~d~~v~vwd~~~~~~~~~~~~h~ 561 (694)
T 3dm0_A 501 TLG-ECKYTISEGGEG-HRDWVSCVRFSPNTLQPTIVSA-----------------SWDKTVKVWNLSNCKLRSTLAGHT 561 (694)
T ss_dssp TTS-CEEEEECSSTTS-CSSCEEEEEECSCSSSCEEEEE-----------------ETTSCEEEEETTTCCEEEEECCCS
T ss_pred CCC-CcceeeccCCCC-CCCcEEEEEEeCCCCcceEEEE-----------------eCCCeEEEEECCCCcEEEEEcCCC
Confidence 763 444443321110 0001111111 11 234443 345889999999999887765443
Q ss_pred CCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEeCceeEeecCCccCCCC
Q 040693 298 NGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGNGYKVTVGFGNKNFTSG 374 (382)
Q Consensus 298 ~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~~g~~~~~~~~~~~~g 374 (382)
.. ...+.+ ++.++..++ .++.|...|..+++.+.+......+. +... .++.++++..++. +.+|.+ .++
T Consensus 562 ~~--v~~v~~spdg~~l~sg~--~Dg~i~iwd~~~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~~~-i~iwd~--~~~ 633 (694)
T 3dm0_A 562 GY--VSTVAVSPDGSLCASGG--KDGVVLLWDLAEGKKLYSLEANSVIH-ALCFSPNRYWLCAATEHG-IKIWDL--ESK 633 (694)
T ss_dssp SC--EEEEEECTTSSEEEEEE--TTSBCEEEETTTTEEEECCBCSSCEE-EEEECSSSSEEEEEETTE-EEEEET--TTT
T ss_pred CC--EEEEEEeCCCCEEEEEe--CCCeEEEEECCCCceEEEecCCCcEE-EEEEcCCCcEEEEEcCCC-EEEEEC--CCC
Confidence 21 122233 234666666 49999999999999988776544322 2223 3455555544433 445544 345
Q ss_pred CeEE
Q 040693 375 TSLY 378 (382)
Q Consensus 375 ~~l~ 378 (382)
+.+-
T Consensus 634 ~~~~ 637 (694)
T 3dm0_A 634 SIVE 637 (694)
T ss_dssp EEEE
T ss_pred CChh
Confidence 5443
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.91 E-value=0.0012 Score=62.03 Aligned_cols=94 Identities=10% Similarity=-0.049 Sum_probs=47.4
Q ss_pred eEEEEECCCCcEEeeecCCC-----CCCCCcceEEeCCEEEEeee-------cCCCcEEEEeCCCCcEeEEEecCCc---
Q 040693 278 GWVAMDASNGNVLWSTADPS-----NGTAPGPVTVANGVLFGGST-------YRQGPIYAMDVKTGKILWSYDTGAT--- 342 (382)
Q Consensus 278 ~v~a~d~~tG~~~W~~~~~~-----~~~~~~~~~~~~~~v~~~~~-------~~~g~l~~ld~~tG~ilw~~~~~~~--- 342 (382)
.|+.+|+++|+.......+. .........-++..+++... .....|+.+|+++|++. ++.....
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~ 343 (388)
T 3pe7_A 265 FIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH-RVARHDTSWK 343 (388)
T ss_dssp EEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEE-EEEECCCCCC
T ss_pred eEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceE-EeccccCccc
Confidence 49999999998655444332 00111123334444443221 13568999999988763 3322222
Q ss_pred --------eecceEE--eCCEEEEEeCceeEeecCCccCC
Q 040693 343 --------IYGGASV--SNGCIYMGNGYKVTVGFGNKNFT 372 (382)
Q Consensus 343 --------~~~~p~~--~~g~lyv~~~~g~~~~~~~~~~~ 372 (382)
....+.. .+.+|++.+..+....+|.++..
T Consensus 344 ~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 344 VFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp CBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred ccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 2344444 33466666654343445555543
No 170
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.90 E-value=0.0076 Score=58.00 Aligned_cols=141 Identities=9% Similarity=0.088 Sum_probs=75.6
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCccc-ceeee--CCeEEEEecCccccccccCCCCCCCCCceEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMW-GAATD--ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVA 281 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~-~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a 281 (382)
++.||+...++.++.+|.++++.............+.... ..+++ ++.+|++.. ..+.|+.
T Consensus 230 ~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~----------------~~~~I~~ 293 (409)
T 3hrp_A 230 EEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ----------------NLSSVYK 293 (409)
T ss_dssp SSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET----------------TTTEEEE
T ss_pred CCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC----------------CCCEEEE
Confidence 4567777778899999999887544322111111111112 34443 688998732 3467888
Q ss_pred EECCCCcEEeeecCC-C-CC---------C-CCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC--c----
Q 040693 282 MDASNGNVLWSTADP-S-NG---------T-APGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA--T---- 342 (382)
Q Consensus 282 ~d~~tG~~~W~~~~~-~-~~---------~-~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~--~---- 342 (382)
+|.. |+........ . .. . ....+.++ ++.+|++....++.|..+|+.+|++.--.-.+. +
T Consensus 294 ~~~~-g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g 372 (409)
T 3hrp_A 294 ITPD-GECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDG 372 (409)
T ss_dssp ECTT-CCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCB
T ss_pred EecC-CCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCC
Confidence 8865 4433222111 0 00 0 11123343 466887752136789999987888654333211 0
Q ss_pred -----eecce---EE-eCCEEEEEeCcee
Q 040693 343 -----IYGGA---SV-SNGCIYMGNGYKV 362 (382)
Q Consensus 343 -----~~~~p---~~-~~g~lyv~~~~g~ 362 (382)
.+..| ++ .++.|||+.....
T Consensus 373 ~~~~~~~~~P~giavd~~g~lyVad~~n~ 401 (409)
T 3hrp_A 373 TPLEATFNYPYDICYDGEGGYWIAEAWGK 401 (409)
T ss_dssp STTTCCBSSEEEEEECSSSEEEEEESTTC
T ss_pred ChhceEeCCceEEEEcCCCCEEEEECCCC
Confidence 12223 33 3589999987544
No 171
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.90 E-value=0.0015 Score=68.51 Aligned_cols=143 Identities=13% Similarity=0.112 Sum_probs=81.9
Q ss_pred ecE-EEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDI-VVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~-v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
++. |++++.++-|+.+|..+|+.. .+....+............ .++.+++++ . +.|..+
T Consensus 416 ~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt-----------------~-~Gl~~~ 476 (795)
T 4a2l_A 416 KKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGT-----------------L-SALVRF 476 (795)
T ss_dssp TTTEEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEE-----------------S-SCEEEE
T ss_pred CCCEEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEe-----------------c-CceeEE
Confidence 345 888988667999999988743 3332111111222333333 357788873 2 459999
Q ss_pred ECCCCcEEeeecCC--CC--CCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEec---CC----ceecceEE-
Q 040693 283 DASNGNVLWSTADP--SN--GTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDT---GA----TIYGGASV- 349 (382)
Q Consensus 283 d~~tG~~~W~~~~~--~~--~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~---~~----~~~~~p~~- 349 (382)
|+++++...-.... .. ......+..+ ++.+|+++ .+.|+.+|.++++. ++.. .. ....+...
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt---~~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d 551 (795)
T 4a2l_A 477 NPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG---EEGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEA 551 (795)
T ss_dssp ETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE---SSCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEEC
T ss_pred eCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe---CCceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEEC
Confidence 99988665432220 00 0111223333 57899998 47899999988776 4431 11 11222222
Q ss_pred eCCEEEEEeCceeEeecCCccCCCCC
Q 040693 350 SNGCIYMGNGYKVTVGFGNKNFTSGT 375 (382)
Q Consensus 350 ~~g~lyv~~~~g~~~~~~~~~~~~g~ 375 (382)
.+|+|++++..| ++.++..+++
T Consensus 552 ~~g~lWigT~~G----l~~~d~~~~~ 573 (795)
T 4a2l_A 552 SNGIIWVGTREG----FYCFNEKDKQ 573 (795)
T ss_dssp TTSCEEEEESSC----EEEEETTTTE
T ss_pred CCCCEEEEeCCC----ceeECCCCCc
Confidence 468999998753 4556665553
No 172
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.89 E-value=0.0074 Score=59.85 Aligned_cols=143 Identities=16% Similarity=0.237 Sum_probs=82.0
Q ss_pred cEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 206 DIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
..|+++..++.+..+|. +++.+....... ........ ++..+... ..++.|..+|
T Consensus 398 ~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~-----~~v~~~~~s~d~~~l~~~-----------------~~d~~v~~w~ 454 (577)
T 2ymu_A 398 QTIASASDDKTVKLWNR-NGQLLQTLTGHS-----SSVWGVAFSPDDQTIASA-----------------SDDKTVKLWN 454 (577)
T ss_dssp SCEEEEETTSEEEEECT-TCCEEEEEECCS-----SCEEEEEECTTSSEEEEE-----------------ETTSEEEEEE
T ss_pred CEEEEEeCCCEEEEEeC-CCCEEEEecCCC-----CCeEEEEECCCCCEEEEE-----------------cCCCEEEEEE
Confidence 46777888899999995 577776655321 12222222 44555554 3347788888
Q ss_pred CCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEeCc
Q 040693 284 ASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGNGY 360 (382)
Q Consensus 284 ~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~~ 360 (382)
. +++.+.+....... ...+.+ ++.++..++ .++.|...|. +|+.+.++...........+ .+++++++.+.
T Consensus 455 ~-~~~~~~~~~~~~~~--v~~~~~spd~~~las~~--~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 455 R-NGQLLQTLTGHSSS--VRGVAFSPDGQTIASAS--DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp T-TSCEEEEEECCSSC--EEEEEECTTSCEEEEEE--TTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred C-CCCEEEEEcCCCCC--EEEEEEcCCCCEEEEEe--CCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEEC
Confidence 5 67766665543321 122223 234555555 4899999995 68888887654333333333 35555554443
Q ss_pred eeEeecCCccCCCCCeEEEE
Q 040693 361 KVTVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 361 g~~~~~~~~~~~~g~~l~~~ 380 (382)
...+.+|. .+|+.+-.+
T Consensus 529 dg~v~lwd---~~~~~~~~~ 545 (577)
T 2ymu_A 529 DKTVKLWN---RNGQLLQTL 545 (577)
T ss_dssp TSEEEEEC---TTSCEEEEE
T ss_pred cCEEEEEe---CCCCEEEEE
Confidence 34466776 356766554
No 173
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.87 E-value=0.0071 Score=58.18 Aligned_cols=223 Identities=13% Similarity=0.041 Sum_probs=120.0
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|.+++...-..... ....+.++..+.+++.+++.+..+
T Consensus 186 D~~v~iwd~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~g~~d------------------------ 230 (435)
T 4e54_B 186 EGTTRLQDFKGNILRVFASSD-----------TINIWFCSLDVSASSRMVVTGDNV------------------------ 230 (435)
T ss_dssp SSCEEEEETTSCEEEEEECCS-----------SCSCCCCCEEEETTTTEEEEECSS------------------------
T ss_pred CCEEEEeeccCCceeEEeccC-----------CCCccEEEEEECCCCCEEEEEeCC------------------------
Confidence 899999999776554333221 111222345677777777776543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceE-EEeeeCceeecEEEEEc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMM-LSMYRNKVKHDIVVAVQ 212 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~g~~~~~v~~~~ 212 (382)
+.|..+|.. |+.+.++..... ++. ..+..++ ..+++.+.
T Consensus 231 ---------g~i~~wd~~-~~~~~~~~~h~~----------------------------~v~~v~~~p~~--~~~~~s~s 270 (435)
T 4e54_B 231 ---------GNVILLNMD-GKELWNLRMHKK----------------------------KVTHVALNPCC--DWFLATAS 270 (435)
T ss_dssp ---------SBEEEEESS-SCBCCCSBCCSS----------------------------CEEEEEECTTC--SSEEEEEE
T ss_pred ---------CcEeeeccC-cceeEEEecccc----------------------------eEEeeeecCCC--ceEEEEec
Confidence 889999975 666654433221 111 1122223 45777888
Q ss_pred cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE
Q 040693 213 KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL 290 (382)
Q Consensus 213 ~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~ 290 (382)
.|+.+..+|..+++..-.+.... ........... ++..|+.+ ..++.|..+|.++++..
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~~--~h~~~v~~~~~spdg~~l~s~-----------------~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYSL--PHRHPVNAACFSPDGARLLTT-----------------DQKSEIRVYSASQWDCP 331 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBCC--BCSSCEEECCBCTTSSEEEEE-----------------ESSSCEEEEESSSSSSE
T ss_pred CcceeeEEecccccccceEEEee--eccccccceeECCCCCeeEEE-----------------cCCCEEEEEECCCCccc
Confidence 89999999988776443332111 00011111111 45556555 34588999999999766
Q ss_pred eeecCCCCCC--CCcc--eEE--eCCEEEEeee----------cCCCcEEEEeCCCCcEeEEEecCCc-eecce-EE-eC
Q 040693 291 WSTADPSNGT--APGP--VTV--ANGVLFGGST----------YRQGPIYAMDVKTGKILWSYDTGAT-IYGGA-SV-SN 351 (382)
Q Consensus 291 W~~~~~~~~~--~~~~--~~~--~~~~v~~~~~----------~~~g~l~~ld~~tG~ilw~~~~~~~-~~~~p-~~-~~ 351 (382)
-......... ...+ ... .+..+.++.. ...+.|..+|..+|+++.+...+.. ...+. .. .+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspd 411 (435)
T 4e54_B 332 LGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPM 411 (435)
T ss_dssp EEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTT
T ss_pred eEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCC
Confidence 5543222100 0011 111 1223333321 1235688999999999988754432 22222 22 36
Q ss_pred CEEEEEeCceeEeecCCccC
Q 040693 352 GCIYMGNGYKVTVGFGNKNF 371 (382)
Q Consensus 352 g~lyv~~~~g~~~~~~~~~~ 371 (382)
++++++.+++. +.+|.+..
T Consensus 412 g~~lasg~d~~-i~iW~~~~ 430 (435)
T 4e54_B 412 GDTLASAMGYH-ILIWSQQE 430 (435)
T ss_dssp SSCEEEECSSE-EEECCCC-
T ss_pred CCEEEEEcCCc-EEEEECCc
Confidence 67777666554 56776543
No 174
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.85 E-value=0.0027 Score=57.69 Aligned_cols=108 Identities=9% Similarity=0.060 Sum_probs=58.0
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCC--------CCCCcccceee-----eCCeEEEEecCccccccccCCCC
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGG--------LGGGAMWGAAT-----DERRIYTNIANSQHKNFNLKPSK 271 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~--------~~g~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~ 271 (382)
+..+++++.++.+..+|..+++.+-.+...... ........... .+..++++
T Consensus 124 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~--------------- 188 (351)
T 3f3f_A 124 GLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVS--------------- 188 (351)
T ss_dssp CSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEE---------------
T ss_pred CcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEe---------------
Confidence 457888889999999999999876554421100 00001111111 24455554
Q ss_pred CCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEe-CC-----EEEEeeecCCCcEEEEeCCCC
Q 040693 272 NSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVA-NG-----VLFGGSTYRQGPIYAMDVKTG 331 (382)
Q Consensus 272 ~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~-~~-----~v~~~~~~~~g~l~~ld~~tG 331 (382)
..++.+...+..+++..-.............+.+. ++ +++.++ .++.|..+|..++
T Consensus 189 --~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~--~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 189 --ALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC--KDGRIRIFKITEK 250 (351)
T ss_dssp --ETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE--TTSCEEEEEEEEC
T ss_pred --cCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc--CCCeEEEEeCCCC
Confidence 23466777777777764333333211111222232 32 455555 5899999998765
No 175
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.85 E-value=0.0032 Score=63.74 Aligned_cols=191 Identities=9% Similarity=0.022 Sum_probs=112.4
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|..+++.+-.+.- +..+..+..+.+++.+++.+..+
T Consensus 169 D~~v~lwd~~~~~~~~~l~~-------------H~~~V~~v~fspdg~~las~s~D------------------------ 211 (611)
T 1nr0_A 169 DNTVAIFEGPPFKFKSTFGE-------------HTKFVHSVRYNPDGSLFASTGGD------------------------ 211 (611)
T ss_dssp TSCEEEEETTTBEEEEEECC-------------CSSCEEEEEECTTSSEEEEEETT------------------------
T ss_pred CCeEEEEECCCCeEeeeecc-------------ccCceEEEEECCCCCEEEEEECC------------------------
Confidence 88899999888877654331 11111235566666666655543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|..+|+.+-.+....... .+......-..+.++ +..|+.+..
T Consensus 212 ---------~~i~lwd~~~g~~~~~~~~~~~~~--------------------~~h~~~V~~v~~spd---g~~l~s~s~ 259 (611)
T 1nr0_A 212 ---------GTIVLYNGVDGTKTGVFEDDSLKN--------------------VAHSGSVFGLTWSPD---GTKIASASA 259 (611)
T ss_dssp ---------SCEEEEETTTCCEEEECBCTTSSS--------------------CSSSSCEEEEEECTT---SSEEEEEET
T ss_pred ---------CcEEEEECCCCcEeeeeccccccc--------------------cccCCCEEEEEECCC---CCEEEEEeC
Confidence 889999999999876553210000 000011111222333 367888889
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeee
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWST 293 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~ 293 (382)
|+.+..+|..+|+.+-.+...... .........++..++.. ..++.+..+|+++++..-..
T Consensus 260 D~~v~lWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~s~-----------------s~d~~i~~~~~~~~~~~~~~ 320 (611)
T 1nr0_A 260 DKTIKIWNVATLKVEKTIPVGTRI--EDQQLGIIWTKQALVSI-----------------SANGFINFVNPELGSIDQVR 320 (611)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSG--GGCEEEEEECSSCEEEE-----------------ETTCCEEEEETTTTEEEEEE
T ss_pred CCeEEEEeCCCCceeeeecCCCCc--cceeEEEEEcCCEEEEE-----------------eCCCcEEEEeCCCCCcceEE
Confidence 999999999999988777643210 00112222244555544 34578999999998765443
Q ss_pred cCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEE
Q 040693 294 ADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWS 336 (382)
Q Consensus 294 ~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~ 336 (382)
..... ....+.+ ++.+++.++ .++.|...|..+|+..-.
T Consensus 321 ~gh~~--~v~~l~~spdg~~l~s~s--~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 321 YGHNK--AITALSSSADGKTLFSAD--AEGHINSWDISTGISNRV 361 (611)
T ss_dssp CCCSS--CEEEEEECTTSSEEEEEE--TTSCEEEEETTTCCEEEC
T ss_pred cCCCC--CEEEEEEeCCCCEEEEEe--CCCcEEEEECCCCceeee
Confidence 32221 1122222 345677666 499999999999887543
No 176
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=97.85 E-value=0.009 Score=59.60 Aligned_cols=60 Identities=15% Similarity=0.246 Sum_probs=36.4
Q ss_pred cEEEEeCCCC--cEeEEEec--CC----ceecceEE-eCC-EEEEEeCc------ee--EeecCCccCCCCCeEEEEE
Q 040693 322 PIYAMDVKTG--KILWSYDT--GA----TIYGGASV-SNG-CIYMGNGY------KV--TVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 322 ~l~~ld~~tG--~ilw~~~~--~~----~~~~~p~~-~~g-~lyv~~~~------g~--~~~~~~~~~~~g~~l~~~~ 381 (382)
..+.||.++. +++|++.. +. .+.++... .+| .|++-++. |. ...+.+++..+.+++|-+.
T Consensus 471 l~y~ID~~~~Tv~~vw~y~~~~g~~~yS~~~gs~Q~L~nGN~li~~g~~~~~~~~g~~~~~~i~E~~~~~~evv~e~~ 548 (571)
T 3elq_A 471 VEYKIDEKKGTVQQVWEYGKERGYDFYSPITSIIEYQADRNTMFGFGGSIHLFDVGQPTVGKLNEIDYKTKEVKVEID 548 (571)
T ss_dssp EEEEEETTTTEEEEEEEECGGGGGGGCCSSCCEEEEETTTTEEEEEEEEETTTSTTSEEEEEEEEEETTTCCEEEEEE
T ss_pred EEEEEcCCCCEEEEEEEecCCCCCCcccccccccEECCCCCEEEEecccccccccCCCCceeEEEECCCCCEEEEEEE
Confidence 3566998866 89999953 22 23334433 344 44443331 11 4667889998888888764
No 177
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.84 E-value=0.00078 Score=61.63 Aligned_cols=160 Identities=12% Similarity=0.058 Sum_probs=82.9
Q ss_pred EEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCC
Q 040693 208 VVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASN 286 (382)
Q Consensus 208 v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~t 286 (382)
++++. +..|+.+|.++|+...-...... ..........+ .++.+|++....... +.......+.|+.+|+.
T Consensus 67 l~v~~-~~~l~~~d~~~g~~~~~~~~~~~-~~~~~~~di~~d~dG~l~~~~~~~~~~-----~~~~~~~~~~l~~~d~~- 138 (297)
T 3g4e_A 67 YVATI-GTKFCALNWKEQSAVVLATVDND-KKNNRFNDGKVDPAGRYFAGTMAEETA-----PAVLERHQGALYSLFPD- 138 (297)
T ss_dssp EEEEE-TTEEEEEETTTTEEEEEEECCTT-CSSEEEEEEEECTTSCEEEEEEECCSB-----TTBCCTTCEEEEEECTT-
T ss_pred EEEEE-CCeEEEEECCCCcEEEEEecCCC-CCCCCCCCEEECCCCCEEEecCCcccc-----cccccCCCcEEEEEECC-
Confidence 55555 45699999999986544433211 01111112223 356688865332110 00011234678999875
Q ss_pred CcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeC--CCCcEeEEE---ecCC--ceecceEE-eCCEEEE
Q 040693 287 GNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDV--KTGKILWSY---DTGA--TIYGGASV-SNGCIYM 356 (382)
Q Consensus 287 G~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~--~tG~ilw~~---~~~~--~~~~~p~~-~~g~lyv 356 (382)
|+..-...... ....+.+ ++..+|+... ..+.|+.+|. ++|++.-+. .... ..-...++ .+|+||+
T Consensus 139 g~~~~~~~~~~---~pngi~~spdg~~lyv~~~-~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwv 214 (297)
T 3g4e_A 139 HHVKKYFDQVD---ISNGLDWSLDHKIFYYIDS-LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWV 214 (297)
T ss_dssp SCEEEEEEEES---BEEEEEECTTSCEEEEEEG-GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEE
T ss_pred CCEEEEeeccc---cccceEEcCCCCEEEEecC-CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEE
Confidence 54432221111 1112333 3456777653 4678999875 678753221 1111 12223344 4789999
Q ss_pred EeCceeEeecCCccCCCCCeEEEEE
Q 040693 357 GNGYKVTVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 357 ~~~~g~~~~~~~~~~~~g~~l~~~~ 381 (382)
++..+.. ++.+|+.+|+.+-.+.
T Consensus 215 a~~~~~~--v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 215 ACYNGGR--VIRLDPVTGKRLQTVK 237 (297)
T ss_dssp EEETTTE--EEEECTTTCCEEEEEE
T ss_pred EEcCCCE--EEEEcCCCceEEEEEE
Confidence 9765432 4667888899886654
No 178
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.83 E-value=0.00081 Score=64.06 Aligned_cols=249 Identities=8% Similarity=-0.070 Sum_probs=138.0
Q ss_pred EEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcC
Q 040693 29 YYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATG 108 (382)
Q Consensus 29 v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~ 108 (382)
....++||......... + .|..||.+|++++=+..++... .+.+++++..+|++..
T Consensus 29 ~~~~~~yV~~~~~~~~~--------d-~vsvID~~t~~v~~~i~vG~~P---------------~i~~spDg~~lyVan~ 84 (368)
T 1mda_H 29 AISRRSHITLPAYFAGT--------T-ENWVSCAGCGVTLGHSLGAFLS---------------LAVAGHSGSDFALAST 84 (368)
T ss_dssp CCTTEEEEEECTTTCSS--------E-EEEEEETTTTEEEEEEEECTTC---------------EEEECTTSSCEEEEEE
T ss_pred CCCCeEEEECCccCCcc--------c-eEEEEECCCCeEEEEEeCCCCC---------------ceEECCCCCEEEEEcc
Confidence 34478899775311100 2 7999999999999998875321 2678888899999862
Q ss_pred CCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCC
Q 040693 109 NLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDAD 188 (382)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (382)
.. . |..-+..++.|..||+.|++++-+...+....+.
T Consensus 85 ~~--------------~---------r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~-------------------- 121 (368)
T 1mda_H 85 SF--------------A---------RSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFS-------------------- 121 (368)
T ss_dssp EE--------------T---------TTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCC--------------------
T ss_pred cc--------------c---------ccccCCCCCEEEEEECCCCCEEEEEECCCccccc--------------------
Confidence 10 0 0000111378999999999999999876211000
Q ss_pred CCCCceEEEeeeCceeecEEEEEcc--CcEEEE--EeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccc
Q 040693 189 FGEAPMMLSMYRNKVKHDIVVAVQK--SGFAWA--LDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKN 264 (382)
Q Consensus 189 ~~~~p~~~~~~~~g~~~~~v~~~~~--~g~l~a--ld~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~ 264 (382)
....|.-..++++| ..+|+... ...+.. +|.++ +-+.+.+ +. +....++...|+..
T Consensus 122 ~g~~P~~ia~SpDG---k~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-----~~--~~~~p~g~~~~~~~------- 181 (368)
T 1mda_H 122 VGPRVHIIGNCASS---ACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-----SC--FHIHPGAAATHYLG------- 181 (368)
T ss_dssp BSCCTTSEEECTTS---SCEEEEECSSSCEEEEEETTTEE---EEEEECS-----SC--CCCEEEETTEEECC-------
T ss_pred cCCCcceEEEcCCC---CEEEEEccCCCCeEEEEEEchhh---ceEEECC-----Cc--eEEccCCCeEEEEE-------
Confidence 00122223333344 34555543 345777 78887 4444432 11 11122455566642
Q ss_pred cccCCCCCCCCCceEEEEECCC-----CcEEeeecCCCCCCCCcc-eEEeCCEEEEeeecCCCcEEEEeCCCCc--Ee--
Q 040693 265 FNLKPSKNSTIAGGWVAMDASN-----GNVLWSTADPSNGTAPGP-VTVANGVLFGGSTYRQGPIYAMDVKTGK--IL-- 334 (382)
Q Consensus 265 ~~~~~~~~~~~~g~v~a~d~~t-----G~~~W~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~g~l~~ld~~tG~--il-- 334 (382)
..++++..+|..+ |+..|+.. ........| ...+++.+|..+ . +.++.+|..+++ ++
T Consensus 182 ---------~~dg~~~~vd~~~~~~~~~~v~~~~t-~~i~vg~~P~~~~~~~~~~~vs--~-~~V~viD~~~~~~~v~~~ 248 (368)
T 1mda_H 182 ---------SCPASLAASDLAAAPAAAGIVGAQCT-GAQNCSSQAAQANYPGMLVWAV--A-SSILQGDIPAAGATMKAA 248 (368)
T ss_dssp ---------CCTTSCEEEECCSSCCCCEECCCCSC-TTSCBCSCCEEETTTTEEEECB--S-SCCEEEECCSSCCEEECC
T ss_pred ---------cCCCCEEEEECccccccCCeEEEEee-eeeeCCCCccccccCCEEEEEc--C-CEEEEEECCCCcceEEEE
Confidence 3357788899997 88777432 110011112 123356777766 3 899999987543 22
Q ss_pred EEEecC----Ccee---cc-eEE--eCCEEEEEeC-c-e------eEeecCCccCCCCCeEEE
Q 040693 335 WSYDTG----ATIY---GG-ASV--SNGCIYMGNG-Y-K------VTVGFGNKNFTSGTSLYA 379 (382)
Q Consensus 335 w~~~~~----~~~~---~~-p~~--~~g~lyv~~~-~-g------~~~~~~~~~~~~g~~l~~ 379 (382)
|.+... .... .. ..+ .++++||+.. . + .... .+|..+++.+-.
T Consensus 249 ~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~--ViD~~t~~vv~~ 309 (368)
T 1mda_H 249 IDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS--SVTASVGQTSGP 309 (368)
T ss_dssp CCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE--EEESSSCCEEEC
T ss_pred EEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE--EEECCCCeEEEE
Confidence 322111 0111 11 122 4689999754 2 2 2122 688888887643
No 179
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.82 E-value=0.0041 Score=57.57 Aligned_cols=93 Identities=14% Similarity=0.108 Sum_probs=45.7
Q ss_pred CceEEEEECC-CCcEEeee--cCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCC--CCcEeE--EEec-CCc---
Q 040693 276 AGGWVAMDAS-NGNVLWST--ADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVK--TGKILW--SYDT-GAT--- 342 (382)
Q Consensus 276 ~g~v~a~d~~-tG~~~W~~--~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~--tG~ilw--~~~~-~~~--- 342 (382)
.+.|..+|+. +|+..-.. ..... .....+.+. +.++|++.. .++.+..++.+ +|+..- .... +..
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g-~~p~~~~~spdg~~l~v~~~-~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAG-FGPRHLVFSPDGQYAFLAGE-LSSQIASLKYDTQTGAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTT-CCEEEEEECTTSSEEEEEET-TTTEEEEEEEETTTTEEEEEEEEESSCTTCCS
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCC-CCCceEEECCCCCEEEEEeC-CCCEEEEEEecCCCCceEEeeeeeecCCCCCC
Confidence 4678889988 67654332 22211 011112332 346777653 45666666554 576532 2221 111
Q ss_pred --eecceEE-eCC-EEEEEeCceeEeecCCcc
Q 040693 343 --IYGGASV-SNG-CIYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 343 --~~~~p~~-~~g-~lyv~~~~g~~~~~~~~~ 370 (382)
....+.+ .+| .||+++.....+.+|.++
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 1122333 344 588876644445666665
No 180
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.80 E-value=0.013 Score=52.30 Aligned_cols=111 Identities=12% Similarity=-0.050 Sum_probs=65.8
Q ss_pred cEEEEEcc---CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEE
Q 040693 206 DIVVAVQK---SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWV 280 (382)
Q Consensus 206 ~~v~~~~~---~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~ 280 (382)
+.||+... .+.++.++.+ |+..-...... .....+.++ +++.||++.. ..+.|.
T Consensus 134 g~lyv~~~~~~~~~I~~~~~d-g~~~~~~~~~~----~~~P~gia~d~~~~~lyv~d~----------------~~~~I~ 192 (267)
T 1npe_A 134 GNLYWTDWNRDNPKIETSHMD-GTNRRILAQDN----LGLPNGLTFDAFSSQLCWVDA----------------GTHRAE 192 (267)
T ss_dssp TEEEEEECCSSSCEEEEEETT-SCCCEEEECTT----CSCEEEEEEETTTTEEEEEET----------------TTTEEE
T ss_pred CEEEEEECCCCCcEEEEEecC-CCCcEEEEECC----CCCCcEEEEcCCCCEEEEEEC----------------CCCEEE
Confidence 45555543 3578777765 43322111110 012223334 4678998743 347899
Q ss_pred EEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC
Q 040693 281 AMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA 341 (382)
Q Consensus 281 a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~ 341 (382)
.+|+.+++..-..+... ....+.++++.+|++.. ..+.|+.+|+++|+++-+++.+.
T Consensus 193 ~~~~~g~~~~~~~~~~~---~P~gi~~d~~~lyva~~-~~~~v~~~d~~~g~~~~~i~~g~ 249 (267)
T 1npe_A 193 CLNPAQPGRRKVLEGLQ---YPFAVTSYGKNLYYTDW-KTNSVIAMDLAISKEMDTFHPHK 249 (267)
T ss_dssp EEETTEEEEEEEEECCC---SEEEEEEETTEEEEEET-TTTEEEEEETTTTEEEEEECCSS
T ss_pred EEecCCCceEEEecCCC---CceEEEEeCCEEEEEEC-CCCeEEEEeCCCCCceEEEcccc
Confidence 99998655433333211 11234567889999874 46899999999999988877653
No 181
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.80 E-value=0.002 Score=67.39 Aligned_cols=146 Identities=12% Similarity=0.079 Sum_probs=82.1
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
++.|++++.. -|+.+|..+++...................... .++.+++++ ..+.|+.+|
T Consensus 460 ~g~lwigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-----------------~~~Gl~~~~ 521 (781)
T 3v9f_A 460 NKKIWIGTHA-GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT-----------------FGGGVGIYT 521 (781)
T ss_dssp TSEEEEEETT-EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE-----------------SSSCEEEEC
T ss_pred CCCEEEEECC-ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEE-----------------cCCCEEEEe
Confidence 5678888875 499999998876544332211111112222222 467788873 335599999
Q ss_pred CCCCcEEeeecCCC-CCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC----ceecceEE-eCCEEEE
Q 040693 284 ASNGNVLWSTADPS-NGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA----TIYGGASV-SNGCIYM 356 (382)
Q Consensus 284 ~~tG~~~W~~~~~~-~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~----~~~~~p~~-~~g~lyv 356 (382)
+++++...-..... .......+..+ ++.+|+++. .|-++.+|+++++.. .+.... ....+.+. .+|+|++
T Consensus 522 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--~Glv~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lW~ 598 (781)
T 3v9f_A 522 PDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--EGLVCFPSARNFDYQ-VFQRKEGLPNTHIRAISEDKNGNIWA 598 (781)
T ss_dssp TTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET--TEEEEESCTTTCCCE-EECGGGTCSCCCCCEEEECSSSCEEE
T ss_pred CCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--CCceEEECCCCCcEE-EccccCCCCCceEEEEEECCCCCEEE
Confidence 98886544322111 00111223333 578999983 444499999888743 333221 12233333 4799999
Q ss_pred EeCceeEeecCCccCCCCC
Q 040693 357 GNGYKVTVGFGNKNFTSGT 375 (382)
Q Consensus 357 ~~~~g~~~~~~~~~~~~g~ 375 (382)
++..|- +.+++.+++
T Consensus 599 ~t~~Gl----~~~~~~~~~ 613 (781)
T 3v9f_A 599 STNTGI----SCYITSKKC 613 (781)
T ss_dssp ECSSCE----EEEETTTTE
T ss_pred EcCCce----EEEECCCCc
Confidence 987753 456665543
No 182
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.79 E-value=0.0021 Score=67.35 Aligned_cols=155 Identities=11% Similarity=0.077 Sum_probs=85.9
Q ss_pred eEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccC-C-C-CCCCCcccceeee-CCe-EEEEecCccccccccC
Q 040693 194 MMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAG-P-G-GLGGGAMWGAATD-ERR-IYTNIANSQHKNFNLK 268 (382)
Q Consensus 194 ~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~-~-~-~~~g~~~~~~~~~-~~~-v~~~~~~~~~~~~~~~ 268 (382)
.+..+..+. ++.|++++.++-|..+|..+++...-.... . . ............+ ++. +++++
T Consensus 358 ~V~~i~~d~--~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt----------- 424 (795)
T 4a2l_A 358 VVSCIVEDK--DKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT----------- 424 (795)
T ss_dssp SEEEEEECT--TSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE-----------
T ss_pred eeEEEEECC--CCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe-----------
Confidence 344444443 567899988867999999988765443211 0 0 1112233333333 566 88873
Q ss_pred CCCCCCCCceEEEEECCCCcEEeeecCCCC--CCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEec------
Q 040693 269 PSKNSTIAGGWVAMDASNGNVLWSTADPSN--GTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDT------ 339 (382)
Q Consensus 269 ~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~--~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~------ 339 (382)
..+.|..+|+++|+...-...... ......+..+ ++.+|+++ .+.|+.+|+++++...-...
T Consensus 425 ------~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt---~~Gl~~~~~~~~~~~~~~~~~~~~~~ 495 (795)
T 4a2l_A 425 ------HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT---LSALVRFNPEQRSFTTIEKEKDGTPV 495 (795)
T ss_dssp ------TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE---SSCEEEEETTTTEEEECCBCTTCCBC
T ss_pred ------CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe---cCceeEEeCCCCeEEEcccccccccc
Confidence 346799999999875432221110 0111223333 57899998 46799999998765432211
Q ss_pred CCceecceEE-eCCEEEEEeCceeEeecCCccCCCC
Q 040693 340 GATIYGGASV-SNGCIYMGNGYKVTVGFGNKNFTSG 374 (382)
Q Consensus 340 ~~~~~~~p~~-~~g~lyv~~~~g~~~~~~~~~~~~g 374 (382)
......+... .+|+|++++..| ++.++..++
T Consensus 496 ~~~~i~~i~~d~~g~lWigt~~G----l~~~~~~~~ 527 (795)
T 4a2l_A 496 VSKQITTLFRDSHKRLWIGGEEG----LSVFKQEGL 527 (795)
T ss_dssp CCCCEEEEEECTTCCEEEEESSC----EEEEEEETT
T ss_pred CCceEEEEEECCCCCEEEEeCCc----eEEEeCCCC
Confidence 0111122222 478999998743 344554443
No 183
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.79 E-value=0.0061 Score=62.56 Aligned_cols=188 Identities=14% Similarity=0.090 Sum_probs=111.3
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|..+|..+|+.+-++.-... .+ .+..+.+++..++.+..+
T Consensus 451 Dg~v~vwd~~~~~~~~~~~~h~~-----------~v--~~~~~s~~~~~l~s~s~D------------------------ 493 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRFVGHTK-----------DV--LSVAFSLDNRQIVSASRD------------------------ 493 (694)
T ss_dssp TSEEEEEETTTTEEEEEEECCSS-----------CE--EEEEECTTSSCEEEEETT------------------------
T ss_pred CCcEEEEECCCCcceeEEeCCCC-----------CE--EEEEEeCCCCEEEEEeCC------------------------
Confidence 89999999999988766542110 11 134556666666665543
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.|..+|.. ++........... ......-.....++ ....+++++.
T Consensus 494 ---------~~i~iwd~~-~~~~~~~~~~~~~-----------------------h~~~v~~~~~~~~~-~~~~l~s~s~ 539 (694)
T 3dm0_A 494 ---------RTIKLWNTL-GECKYTISEGGEG-----------------------HRDWVSCVRFSPNT-LQPTIVSASW 539 (694)
T ss_dssp ---------SCEEEECTT-SCEEEEECSSTTS-----------------------CSSCEEEEEECSCS-SSCEEEEEET
T ss_pred ---------CEEEEEECC-CCcceeeccCCCC-----------------------CCCcEEEEEEeCCC-CcceEEEEeC
Confidence 788888864 5555444322110 00000111112222 1356888889
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
|+.+..+|..+++..-.+..-. ........ ++..+..+ ..++.|..+|.++|+.+.
T Consensus 540 d~~v~vwd~~~~~~~~~~~~h~-----~~v~~v~~spdg~~l~sg-----------------~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 540 DKTVKVWNLSNCKLRSTLAGHT-----GYVSTVAVSPDGSLCASG-----------------GKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp TSCEEEEETTTCCEEEEECCCS-----SCEEEEEECTTSSEEEEE-----------------ETTSBCEEEETTTTEEEE
T ss_pred CCeEEEEECCCCcEEEEEcCCC-----CCEEEEEEeCCCCEEEEE-----------------eCCCeEEEEECCCCceEE
Confidence 9999999999998876654211 12222222 44445444 345889999999999988
Q ss_pred eecCCCCCCCCcceEE-eCCEEEEeeecCCCcEEEEeCCCCcEeEEEec
Q 040693 292 STADPSNGTAPGPVTV-ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDT 339 (382)
Q Consensus 292 ~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~ 339 (382)
+...... ...+.+ .++.++++.. ++.|...|..+++++-++..
T Consensus 598 ~~~~~~~---v~~~~~sp~~~~l~~~~--~~~i~iwd~~~~~~~~~~~~ 641 (694)
T 3dm0_A 598 SLEANSV---IHALCFSPNRYWLCAAT--EHGIKIWDLESKSIVEDLKV 641 (694)
T ss_dssp CCBCSSC---EEEEEECSSSSEEEEEE--TTEEEEEETTTTEEEEEECC
T ss_pred EecCCCc---EEEEEEcCCCcEEEEEc--CCCEEEEECCCCCChhhhcc
Confidence 7664321 122223 2444444443 77799999999998876653
No 184
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.76 E-value=0.012 Score=52.08 Aligned_cols=107 Identities=17% Similarity=0.036 Sum_probs=51.8
Q ss_pred cEEEEEccCc--EEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEE
Q 040693 206 DIVVAVQKSG--FAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVA 281 (382)
Q Consensus 206 ~~v~~~~~~g--~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a 281 (382)
.+++....++ .++.+|..+++..-..... .....+.. ++..+++.... .....|+.
T Consensus 142 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~s~dg~~l~~~~~~--------------~~~~~i~~ 201 (297)
T 2ojh_A 142 SFTYCGIRDQVFDIYSMDIDSGVETRLTHGE------GRNDGPDYSPDGRWIYFNSSR--------------TGQMQIWR 201 (297)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEECCCSS------SCEEEEEECTTSSEEEEEECT--------------TSSCEEEE
T ss_pred EEEEEECCCCceEEEEEECCCCcceEcccCC------CccccceECCCCCEEEEEecC--------------CCCccEEE
Confidence 3444555555 5777777777654322211 11122222 45556554321 12355777
Q ss_pred EECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecC---------CCcEEEEeCCCCcEeE
Q 040693 282 MDASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYR---------QGPIYAMDVKTGKILW 335 (382)
Q Consensus 282 ~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~---------~g~l~~ld~~tG~ilw 335 (382)
++..+++..-...... ....+.+ ++..+++.+... ...|+.+|.+++++.-
T Consensus 202 ~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 263 (297)
T 2ojh_A 202 VRVDGSSVERITDSAY---GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET 263 (297)
T ss_dssp EETTSSCEEECCCCSE---EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE
T ss_pred ECCCCCCcEEEecCCc---ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCcee
Confidence 7776665432211111 1112223 234555555311 1569999999887633
No 185
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.75 E-value=0.0024 Score=59.29 Aligned_cols=143 Identities=10% Similarity=0.013 Sum_probs=75.6
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee---------------eCCeEEEEecCccccccccCC
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT---------------DERRIYTNIANSQHKNFNLKP 269 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~---------------~~~~v~~~~~~~~~~~~~~~~ 269 (382)
+..++++..++.+..+|..+++..-....... ......... ++..++++
T Consensus 115 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~------------- 178 (379)
T 3jrp_A 115 GPLLLVASSDGKVSVVEFKENGTTSPIIIDAH---AIGVNSASWAPATIEEDGEHNGTKESRKFVTG------------- 178 (379)
T ss_dssp CSEEEEEETTSEEEEEECCTTSCCCEEEEECC---TTCEEEEEECCCC----------CTTCEEEEE-------------
T ss_pred CCEEEEecCCCcEEEEecCCCCceeeEEecCC---CCceEEEEEcCccccccccccCCCCCCEEEEE-------------
Confidence 36788888999999999998743322221110 001111111 24445554
Q ss_pred CCCCCCCceEEEEECCCCcEEeeec--CCCCCCCCcceEEe-C---C-EEEEeeecCCCcEEEEeCCCCcEeEEEecCC-
Q 040693 270 SKNSTIAGGWVAMDASNGNVLWSTA--DPSNGTAPGPVTVA-N---G-VLFGGSTYRQGPIYAMDVKTGKILWSYDTGA- 341 (382)
Q Consensus 270 ~~~~~~~g~v~a~d~~tG~~~W~~~--~~~~~~~~~~~~~~-~---~-~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~- 341 (382)
..++.|..+|.++++..+... ..........+.+. + + +++.++ .++.|..+|..+++..+......
T Consensus 179 ----~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~ 252 (379)
T 3jrp_A 179 ----GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS--QDRTCIIWTQDNEQGPWKKTLLKE 252 (379)
T ss_dssp ----ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--TTSCEEEEEESSTTSCCEEEESSS
T ss_pred ----eCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe--CCCEEEEEeCCCCCccceeeeecc
Confidence 345789999999887665532 11101111222232 2 3 455555 58999999999886544433221
Q ss_pred ----ceecceEE-eCC-EEEEEeCceeEeecCCcc
Q 040693 342 ----TIYGGASV-SNG-CIYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 342 ----~~~~~p~~-~~g-~lyv~~~~g~~~~~~~~~ 370 (382)
........ .++ .|++++.+|. +.+|.++
T Consensus 253 ~~~~~~v~~~~~s~~g~~l~~~~~dg~-i~iw~~~ 286 (379)
T 3jrp_A 253 EKFPDVLWRASWSLSGNVLALSGGDNK-VTLWKEN 286 (379)
T ss_dssp SCCSSCEEEEEECSSSCCEEEEESSSS-EEEEEEE
T ss_pred ccCCCcEEEEEEcCCCCEEEEecCCCc-EEEEeCC
Confidence 12222223 244 4555555544 5666665
No 186
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.74 E-value=0.0026 Score=59.62 Aligned_cols=169 Identities=9% Similarity=-0.042 Sum_probs=92.4
Q ss_pred ceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeC
Q 040693 143 NSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDR 222 (382)
Q Consensus 143 g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~ 222 (382)
+.|..+|..+|+.+-++..... + ..+... .+.+++. .++.+..+|.
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~~-----------------------------v-~~v~~~---~~~~~~~-~~~~i~i~d~ 126 (355)
T 3vu4_A 81 EVVHIWDDVKKQDVSRIKVDAP-----------------------------V-KDLFLS---REFIVVS-YGDVISVFKF 126 (355)
T ss_dssp TEEEEEETTTTEEEEEEECSSC-----------------------------E-EEEEEC---SSEEEEE-ETTEEEEEES
T ss_pred cEEEEEECCCCcEEEEEECCCc-----------------------------e-EEEEEc---CCEEEEE-EcCEEEEEEC
Confidence 6899999999999887764321 1 111111 2233333 3677999999
Q ss_pred CCC-CeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcE------------
Q 040693 223 DSG-SLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNV------------ 289 (382)
Q Consensus 223 ~tG-~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~------------ 289 (382)
.++ +.+..+.. + . ......-..+.+... ..++.|..+|.++++.
T Consensus 127 ~~~~~~~~~~~~-~------~-~~~~~s~~~la~~sg---------------~~~g~v~iwd~~~~~~~~~~~~~~~~~~ 183 (355)
T 3vu4_A 127 GNPWKRITDDIR-F------G-GVCEFSNGLLVYSNE---------------FNLGQIHITKLQSSGSATTQDQGVQQKA 183 (355)
T ss_dssp STTCCBSSCCEE-E------E-EEEEEETTEEEEEES---------------SCTTCEEEEECCC---------------
T ss_pred CCCceeeEEecc-C------C-ceEEEEccEEEEeCC---------------CcCcEEEEEECCCCCccccccccccccc
Confidence 988 76666553 1 0 000111133333211 3458899999998762
Q ss_pred ----EeeecCCCCCCCCcceEE--eCCEEEEeeecCCCc-EEEEeCCCCcEeEEEecC--CceecceEE-eCCEEEEEeC
Q 040693 290 ----LWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGP-IYAMDVKTGKILWSYDTG--ATIYGGASV-SNGCIYMGNG 359 (382)
Q Consensus 290 ----~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~-l~~ld~~tG~ilw~~~~~--~~~~~~p~~-~~g~lyv~~~ 359 (382)
+-....... ....+.+ ++.++..++ .++. |...|..+|+.+.++..+ .....+... .+++++++.+
T Consensus 184 ~~p~~~~~~~h~~--~v~~~~~s~~g~~l~s~s--~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 184 ILGKGVLIKAHTN--PIKMVRLNRKSDMVATCS--QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp ---CCEEECCCSS--CEEEEEECTTSSEEEEEE--TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEE
T ss_pred cCcccEEEEccCC--ceEEEEECCCCCEEEEEe--CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEE
Confidence 222222211 1122223 234566555 4897 999999999999988732 222223333 3555555555
Q ss_pred ceeEeecCCccCC
Q 040693 360 YKVTVGFGNKNFT 372 (382)
Q Consensus 360 ~g~~~~~~~~~~~ 372 (382)
....+.+|.+...
T Consensus 260 ~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 260 DKWTLHVFEIFND 272 (355)
T ss_dssp TTCEEEEEESSCC
T ss_pred CCCEEEEEEccCC
Confidence 4455777776543
No 187
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.73 E-value=0.0076 Score=57.92 Aligned_cols=195 Identities=12% Similarity=0.105 Sum_probs=101.8
Q ss_pred ceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCC
Q 040693 55 GSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDK 134 (382)
Q Consensus 55 g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (382)
..|+.+|.++|+.+-..... + . ...+.+.+++..+++.....
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~-----------~-~--~~~~~~spdg~~la~~~~~~------------------------ 244 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP-----------R-H--NGAPAFSPDGSKLAFALSKT------------------------ 244 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS-----------S-C--EEEEEECTTSSEEEEEECTT------------------------
T ss_pred cEEEEEECCCCcEEEeecCC-----------C-c--ccCEEEcCCCCEEEEEEecC------------------------
Confidence 48999999999876322210 0 0 12467888877777543210
Q ss_pred CCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccC
Q 040693 135 CIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKS 214 (382)
Q Consensus 135 ~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~ 214 (382)
....|+.+|..+|+.. ++.... ....-....++| ..+++....+
T Consensus 245 ------g~~~i~~~d~~~~~~~---~l~~~~-------------------------~~~~~~~~spdg--~~l~~~s~~~ 288 (415)
T 2hqs_A 245 ------GSLNLYVMDLASGQIR---QVTDGR-------------------------SNNTEPTWFPDS--QNLAFTSDQA 288 (415)
T ss_dssp ------SSCEEEEEETTTCCEE---ECCCCS-------------------------SCEEEEEECTTS--SEEEEEECTT
T ss_pred ------CCceEEEEECCCCCEE---eCcCCC-------------------------CcccceEECCCC--CEEEEEECCC
Confidence 1257999999988763 222111 011111223333 2233334333
Q ss_pred c--EEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE
Q 040693 215 G--FAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL 290 (382)
Q Consensus 215 g--~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~ 290 (382)
+ .++.+|..+|+..--.. . +.....+.+ ++..|++.... .....|+.+|+.+|+..
T Consensus 289 g~~~i~~~d~~~~~~~~l~~-~-----~~~~~~~~~spdG~~l~~~~~~--------------~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 289 GRPQVYKVNINGGAPQRITW-E-----GSQNQDADVSSDGKFMVMVSSN--------------GGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp SSCEEEEEETTSSCCEECCC-S-----SSEEEEEEECTTSSEEEEEEEC--------------SSCEEEEEEETTTCCEE
T ss_pred CCcEEEEEECCCCCEEEEec-C-----CCcccCeEECCCCCEEEEEECc--------------CCceEEEEEECCCCCEE
Confidence 4 79999999887532111 1 112222332 56666655322 12357999999999875
Q ss_pred eeecCCCCCCCCcceEEe--CCEEEEeeecCCC--cEEEEeCCCCcEeEEEecCCceecceEE
Q 040693 291 WSTADPSNGTAPGPVTVA--NGVLFGGSTYRQG--PIYAMDVKTGKILWSYDTGATIYGGASV 349 (382)
Q Consensus 291 W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g--~l~~ld~~tG~ilw~~~~~~~~~~~p~~ 349 (382)
-.... . ....+... +..++.++. +++ .|+.+|.+ |+.+.++....+...+|+.
T Consensus 349 ~l~~~-~---~~~~~~~spdg~~l~~~s~-~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~ 405 (415)
T 2hqs_A 349 VLSST-F---LDETPSLAPNGTMVIYSSS-QGMGSVLNLVSTD-GRFKARLPATDGQVKFPAW 405 (415)
T ss_dssp ECCCS-S---SCEEEEECTTSSEEEEEEE-ETTEEEEEEEETT-SCCEEECCCSSSEEEEEEE
T ss_pred EecCC-C---CcCCeEEcCCCCEEEEEEc-CCCccEEEEEECC-CCcEEEeeCCCCCCcCCcc
Confidence 32221 1 12223332 345555543 233 79999987 5555555544333444443
No 188
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.73 E-value=0.025 Score=51.30 Aligned_cols=140 Identities=17% Similarity=0.206 Sum_probs=78.4
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
..++.+|..+. .|+.-.+.+ ........++.++.||+....... .....+..+|+++. .|+.-
T Consensus 128 ~~~~~~d~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~-----------~~~~~~~~~d~~~~--~W~~~ 190 (301)
T 2vpj_A 128 TSMERYDPNID--QWSMLGDMQ--TAREGAGLVVASGVIYCLGGYDGL-----------NILNSVEKYDPHTG--HWTNV 190 (301)
T ss_dssp CEEEEEETTTT--EEEEEEECS--SCCBSCEEEEETTEEEEECCBCSS-----------CBCCCEEEEETTTT--EEEEE
T ss_pred ceEEEEcCCCC--eEEECCCCC--CCcccceEEEECCEEEEECCCCCC-----------cccceEEEEeCCCC--cEEeC
Confidence 46899998865 476543221 112223334467788876432110 12466999999887 57653
Q ss_pred --CCCCCCCCcceEEeCCEEEEeeecC----CCcEEEEeCCCCcEeEEEe--cCCc-eecceEEeCCEEEEEeCcee---
Q 040693 295 --DPSNGTAPGPVTVANGVLFGGSTYR----QGPIYAMDVKTGKILWSYD--TGAT-IYGGASVSNGCIYMGNGYKV--- 362 (382)
Q Consensus 295 --~~~~~~~~~~~~~~~~~v~~~~~~~----~g~l~~ld~~tG~ilw~~~--~~~~-~~~~p~~~~g~lyv~~~~g~--- 362 (382)
.+... ........++.+|+..... ...++++|+++.+ |+.- ++.. ...+.++.+++||+..+...
T Consensus 191 ~~~p~~r-~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~ 267 (301)
T 2vpj_A 191 TPMATKR-SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS--WTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSL 267 (301)
T ss_dssp CCCSSCC-BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEECCBCSSSB
T ss_pred CCCCccc-ccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc--EEECCCCCCcccceeEEEECCEEEEEcCcCCCcc
Confidence 33322 2334445577777754211 2469999998764 6543 2222 33445668999999876432
Q ss_pred EeecCCccCCCC
Q 040693 363 TVGFGNKNFTSG 374 (382)
Q Consensus 363 ~~~~~~~~~~~g 374 (382)
...++.+|..+.
T Consensus 268 ~~~v~~yd~~~~ 279 (301)
T 2vpj_A 268 LSSIECYDPIID 279 (301)
T ss_dssp EEEEEEEETTTT
T ss_pred cccEEEEcCCCC
Confidence 123444555443
No 189
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.72 E-value=0.017 Score=55.03 Aligned_cols=146 Identities=11% Similarity=-0.034 Sum_probs=75.9
Q ss_pred cEEEE-EccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeee--CCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 206 DIVVA-VQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATD--ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 206 ~~v~~-~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+.||+ ....+.+..++.+.....-..... .....+.+++ ++.||++... ..+.|+.+
T Consensus 171 g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~-----l~~P~giavdp~~g~ly~td~~---------------~~~~I~r~ 230 (386)
T 3v65_B 171 DKLYWTDSGTSRIEVANLDGAHRKVLLWQS-----LEKPRAIALHPMEGTIYWTDWG---------------NTPRIEAS 230 (386)
T ss_dssp TEEEEEETTTTEEEECBTTSCSCEEEECSS-----CSCEEEEEEETTTTEEEEEECS---------------SSCEEEEE
T ss_pred CeEEEEcCCCCeEEEEeCCCCceEEeecCC-----CCCCcEEEEEcCCCeEEEeccC---------------CCCEEEEE
Confidence 34443 444567777776633211111110 0122333444 7889987432 12678888
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEE-ecCCceecceEEeCCEEEEEeC
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSY-DTGATIYGGASVSNGCIYMGNG 359 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~-~~~~~~~~~p~~~~g~lyv~~~ 359 (382)
+.......-...... .....++++ ++++|++.. ..+.|+.+|.+ |+..-.+ ..+...-...++.++.||++..
T Consensus 231 ~~dG~~~~~~~~~~~--~~PnGlavd~~~~~lY~aD~-~~~~I~~~d~d-G~~~~~~~~~~~~~P~giav~~~~ly~td~ 306 (386)
T 3v65_B 231 SMDGSGRRIIADTHL--FWPNGLTIDYAGRRMYWVDA-KHHVIERANLD-GSHRKAVISQGLPHPFAITVFEDSLYWTDW 306 (386)
T ss_dssp ETTSCSCEEEECSSC--SCEEEEEEEGGGTEEEEEET-TTTEEEEECTT-SCSCEEEECSSCSSEEEEEEETTEEEEEET
T ss_pred eCCCCCcEEEEECCC--CCeeeEEEeCCCCEEEEEEC-CCCEEEEEeCC-CCeeEEEEECCCCCceEEEEECCEEEEeeC
Confidence 875433222222111 122334554 689999875 56789999986 3332222 2111222345568999999986
Q ss_pred ceeEeecCCccCCCCCeE
Q 040693 360 YKVTVGFGNKNFTSGTSL 377 (382)
Q Consensus 360 ~g~~~~~~~~~~~~g~~l 377 (382)
.... +..++..+|+.+
T Consensus 307 ~~~~--V~~~~~~~G~~~ 322 (386)
T 3v65_B 307 HTKS--INSANKFTGKNQ 322 (386)
T ss_dssp TTTE--EEEEETTTCCSC
T ss_pred CCCe--EEEEECCCCcce
Confidence 5442 344555556543
No 190
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.70 E-value=0.0067 Score=60.18 Aligned_cols=129 Identities=14% Similarity=0.178 Sum_probs=74.5
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+..|.++..|+.+..+|. +++.+....... ........ ++..+..+ ..++.|..+
T Consensus 438 ~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~-----~~v~~~~~spd~~~las~-----------------~~d~~i~iw 494 (577)
T 2ymu_A 438 DQTIASASDDKTVKLWNR-NGQLLQTLTGHS-----SSVRGVAFSPDGQTIASA-----------------SDDKTVKLW 494 (577)
T ss_dssp SSEEEEEETTSEEEEEET-TSCEEEEEECCS-----SCEEEEEECTTSCEEEEE-----------------ETTSEEEEE
T ss_pred CCEEEEEcCCCEEEEEEC-CCCEEEEEcCCC-----CCEEEEEEcCCCCEEEEE-----------------eCCCEEEEE
Confidence 357778888999999996 577766654321 12222222 44555444 335788889
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEE-e
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMG-N 358 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~-~ 358 (382)
| .+|+.+.+....... ...+.+ ++.+++.++ .++.|...|. +|+.+-.+........+..+ .+++.+++ +
T Consensus 495 ~-~~~~~~~~~~~h~~~--v~~l~~s~dg~~l~s~~--~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 495 N-RNGQLLQTLTGHSSS--VRGVAFSPDGQTIASAS--DDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASAS 568 (577)
T ss_dssp E-TTSCEEEEEECCSSC--EEEEEECTTSSCEEEEE--TTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred c-CCCCEEEEEeCCCCC--EEEEEEcCCCCEEEEEE--CcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 9 578888777654321 122223 234565555 4899999995 68888776543332333333 35554444 4
Q ss_pred Ccee
Q 040693 359 GYKV 362 (382)
Q Consensus 359 ~~g~ 362 (382)
.++.
T Consensus 569 ~D~~ 572 (577)
T 2ymu_A 569 SDKT 572 (577)
T ss_dssp TTSC
T ss_pred CCCE
Confidence 4443
No 191
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.68 E-value=0.015 Score=58.84 Aligned_cols=146 Identities=11% Similarity=0.033 Sum_probs=82.8
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCC--CCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGG--LGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWV 280 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~--~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~ 280 (382)
+..+..+..|+.+..+|..+|+.+-.+...... ........... ++..+..+ ..++.|.
T Consensus 202 g~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~-----------------s~D~~v~ 264 (611)
T 1nr0_A 202 GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA-----------------SADKTIK 264 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE-----------------ETTSEEE
T ss_pred CCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEE-----------------eCCCeEE
Confidence 357888889999999999999887665321100 01112222222 44445444 3458899
Q ss_pred EEECCCCcEEeeecCCCCCC-CCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCC-EEEEE
Q 040693 281 AMDASNGNVLWSTADPSNGT-APGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNG-CIYMG 357 (382)
Q Consensus 281 a~d~~tG~~~W~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g-~lyv~ 357 (382)
.+|+++|+.+-+........ ....+...+..++..+ .++.+..+|..+++++-...-......+..+ .++ .|+.+
T Consensus 265 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s--~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~ 342 (611)
T 1nr0_A 265 IWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS--ANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSA 342 (611)
T ss_dssp EEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEE--TTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEe--CCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEE
Confidence 99999999887776542110 1112233455666666 4899999999988765443322222222222 244 44445
Q ss_pred eCceeEeecCCcc
Q 040693 358 NGYKVTVGFGNKN 370 (382)
Q Consensus 358 ~~~g~~~~~~~~~ 370 (382)
+.++. +.+|.+.
T Consensus 343 s~D~~-v~~Wd~~ 354 (611)
T 1nr0_A 343 DAEGH-INSWDIS 354 (611)
T ss_dssp ETTSC-EEEEETT
T ss_pred eCCCc-EEEEECC
Confidence 55543 4555543
No 192
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.66 E-value=0.019 Score=53.70 Aligned_cols=148 Identities=14% Similarity=0.099 Sum_probs=74.8
Q ss_pred cEEEEE-ccCcEEEEEeCC-CCCeee--eeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceE
Q 040693 206 DIVVAV-QKSGFAWALDRD-SGSLIW--SMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGW 279 (382)
Q Consensus 206 ~~v~~~-~~~g~l~ald~~-tG~~~W--~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v 279 (382)
..+++. ..++.++.+|.+ +|+..- ..+.+. .+......++ ++..+|+... .++.+
T Consensus 157 ~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~---~g~~p~~~~~spdg~~l~v~~~----------------~~~~v 217 (365)
T 1jof_A 157 TYLYSADLTANKLWTHRKLASGEVELVGSVDAPD---PGDHPRWVAMHPTGNYLYALME----------------AGNRI 217 (365)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS---TTCCEEEEEECTTSSEEEEEET----------------TTTEE
T ss_pred CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCC---CCCCCCEeEECCCCCEEEEEEC----------------CCCeE
Confidence 345554 346789999988 887643 222111 0111122222 5667887632 23566
Q ss_pred EEE--ECCCCcEEe---eec-CCCCC---C-------CCcceE-E--eCCEEEEeeecCC----CcEEEEeCC-CCcEeE
Q 040693 280 VAM--DASNGNVLW---STA-DPSNG---T-------APGPVT-V--ANGVLFGGSTYRQ----GPIYAMDVK-TGKILW 335 (382)
Q Consensus 280 ~a~--d~~tG~~~W---~~~-~~~~~---~-------~~~~~~-~--~~~~v~~~~~~~~----g~l~~ld~~-tG~ilw 335 (382)
..+ |.++|+... +.. .+... . ....+. + ++..+|++....+ +.|..++.+ +|++..
T Consensus 218 ~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 218 CEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp EEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred EEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 665 556887643 222 22110 0 111233 3 2457887663112 178888875 788654
Q ss_pred E---EecCCceecceE--E---eCCEEEEEeCceeEeecCCccCC
Q 040693 336 S---YDTGATIYGGAS--V---SNGCIYMGNGYKVTVGFGNKNFT 372 (382)
Q Consensus 336 ~---~~~~~~~~~~p~--~---~~g~lyv~~~~g~~~~~~~~~~~ 372 (382)
. .+.....-...+ . .+..||+++.+...+.+|.++..
T Consensus 298 ~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 298 QLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2 222211111111 2 36778888776556777777654
No 193
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.65 E-value=0.0075 Score=56.94 Aligned_cols=109 Identities=10% Similarity=0.067 Sum_probs=66.5
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCC--Ccccceee--eCCeEEEEecCccccccccCCCCCCCCCceEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGG--GAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWV 280 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g--~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~ 280 (382)
+..++.++.|+.+..+|..+|+.+..+......... ......+. ++..++.+ ..++.|.
T Consensus 261 ~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g-----------------~~dg~i~ 323 (380)
T 3iz6_a 261 GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAG-----------------YSNGDCY 323 (380)
T ss_dssp SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEE-----------------CTTSCEE
T ss_pred CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEE-----------------ECCCCEE
Confidence 467888999999999999999988766543211110 01112222 55666665 4458899
Q ss_pred EEECCCCcEEeeecCCC-C-CCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCc
Q 040693 281 AMDASNGNVLWSTADPS-N-GTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGK 332 (382)
Q Consensus 281 a~d~~tG~~~W~~~~~~-~-~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ 332 (382)
.+|..+++...+..... . ......+.+ ++..++.++ .++.|...+...++
T Consensus 324 vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs--~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 324 VWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGS--WDKNLKIWAFSGHR 377 (380)
T ss_dssp EEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEEC--TTSCEEEEECCSSS
T ss_pred EEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEee--CCCCEEEEecCCCc
Confidence 99999999887763211 0 001122223 344565555 48888888876543
No 194
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.65 E-value=0.00021 Score=67.07 Aligned_cols=142 Identities=6% Similarity=-0.097 Sum_probs=70.9
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+..++++..++.+..+|..+++..+....-.. ........... ++..++.+ ..++.|..+
T Consensus 112 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~-----------------~~d~~i~iw 173 (377)
T 3dwl_C 112 EDKFAVGSGARVISVCYFEQENDWWVSKHLKR-PLRSTILSLDWHPNNVLLAAG-----------------CADRKAYVL 173 (377)
T ss_dssp SSCCEEEESSSCEEECCC-----CCCCEEECS-SCCSCEEEEEECTTSSEEEEE-----------------ESSSCEEEE
T ss_pred CCEEEEEecCCeEEEEEECCcccceeeeEeec-ccCCCeEEEEEcCCCCEEEEE-----------------eCCCEEEEE
Confidence 35677888899999999998874222211000 00112222222 34455554 334778888
Q ss_pred ECCC------------------CcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcE----eEEEe
Q 040693 283 DASN------------------GNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKI----LWSYD 338 (382)
Q Consensus 283 d~~t------------------G~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~i----lw~~~ 338 (382)
|..+ ++.+-+. ... .....+.+ ++.+++.++ .++.|..+|..+++. +..+.
T Consensus 174 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~v~~~~~sp~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~ 248 (377)
T 3dwl_C 174 SAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSG--GWVHAVGFSPSGNALAYAG--HDSSVTIAYPSAPEQPPRALITVK 248 (377)
T ss_dssp EECCSSCC-CCCSCSSCSCCCEEEEEECC-CCS--SSEEEEEECTTSSCEEEEE--TTTEEC-CEECSTTSCEEECCCEE
T ss_pred EEEecccCCCccccccccccchhhhhhcc-cCC--ceEEEEEECCCCCEEEEEe--CCCcEEEEECCCCCCcceeeEeec
Confidence 8753 3333333 111 01112222 234566666 489999999999887 44444
Q ss_pred cCCceecceEE-eCCEEEEEeCceeEeecCCcc
Q 040693 339 TGATIYGGASV-SNGCIYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 339 ~~~~~~~~p~~-~~g~lyv~~~~g~~~~~~~~~ 370 (382)
.......+... .+++++++.+++.+. +|..+
T Consensus 249 ~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 249 LSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 43332233333 577777777666544 44443
No 195
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.61 E-value=0.037 Score=50.15 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=57.8
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
..++.+|..+. .|+.-.+.+ ........+..++.||+....... .....+..+|+++.+ |+.-
T Consensus 175 ~~~~~~d~~~~--~W~~~~~~p--~~r~~~~~~~~~~~i~v~GG~~~~-----------~~~~~v~~yd~~~~~--W~~~ 237 (301)
T 2vpj_A 175 NSVEKYDPHTG--HWTNVTPMA--TKRSGAGVALLNDHIYVVGGFDGT-----------AHLSSVEAYNIRTDS--WTTV 237 (301)
T ss_dssp CCEEEEETTTT--EEEEECCCS--SCCBSCEEEEETTEEEEECCBCSS-----------SBCCCEEEEETTTTE--EEEE
T ss_pred ceEEEEeCCCC--cEEeCCCCC--cccccceEEEECCEEEEEeCCCCC-----------cccceEEEEeCCCCc--EEEC
Confidence 45899999875 677653221 122233344467788876433110 114669999998874 6653
Q ss_pred --CCCCCCCCcceEEeCCEEEEeeecCC----CcEEEEeCCCCcEeEEE
Q 040693 295 --DPSNGTAPGPVTVANGVLFGGSTYRQ----GPIYAMDVKTGKILWSY 337 (382)
Q Consensus 295 --~~~~~~~~~~~~~~~~~v~~~~~~~~----g~l~~ld~~tG~ilw~~ 337 (382)
.+.... .......++.+|+...... ..++.+|+++.+ |+.
T Consensus 238 ~~~p~~r~-~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~ 283 (301)
T 2vpj_A 238 TSMTTPRC-YVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDS--WEV 283 (301)
T ss_dssp CCCSSCCB-SCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTE--EEE
T ss_pred CCCCCccc-ceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCe--EEE
Confidence 333222 2233445676776542111 458899988754 654
No 196
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.59 E-value=0.01 Score=55.60 Aligned_cols=61 Identities=18% Similarity=0.077 Sum_probs=41.3
Q ss_pred eEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCC
Q 040693 56 SLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKC 135 (382)
Q Consensus 56 ~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (382)
.|+.+|+++|+.+-..... +... ..+.+.+++..|++...+
T Consensus 61 ~l~~~d~~~g~~~~lt~~~-----------~~~~--~~~~~spdg~~l~~~~~~-------------------------- 101 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGR-----------GDNT--FGGFLSPDDDALFYVKDG-------------------------- 101 (388)
T ss_dssp EEEEEETTTCEEEECCCSS-----------CBCS--SSCEECTTSSEEEEEETT--------------------------
T ss_pred eEEEEeCCCCceEEeeeCC-----------CCCc--cceEEcCCCCEEEEEeCC--------------------------
Confidence 5889999888876443321 1001 135678888888887643
Q ss_pred CCCCCCcceEEEEECCCCcEEEEEecC
Q 040693 136 IEPENHSNSLLALDLDTGKIVWYKQLG 162 (382)
Q Consensus 136 ~~~~~~~g~v~ald~~tG~~~W~~~~~ 162 (382)
..|+.+|+.+|+..-....+
T Consensus 102 -------~~l~~~d~~~g~~~~~~~~~ 121 (388)
T 3pe7_A 102 -------RNLMRVDLATLEENVVYQVP 121 (388)
T ss_dssp -------TEEEEEETTTCCEEEEEECC
T ss_pred -------CeEEEEECCCCcceeeeech
Confidence 68999999999877655544
No 197
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.59 E-value=0.0038 Score=57.96 Aligned_cols=183 Identities=10% Similarity=-0.027 Sum_probs=100.4
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
++.|..+|..+|+.+.+....... .+...|.++.. ..++.|.+-..++.+..+|
T Consensus 57 Dg~v~iwd~~~~~~~~~~~~~~v~----------------------~~~~~~~~~s~----s~D~~i~~w~~~~~~~~~~ 110 (343)
T 3lrv_A 57 DGALHFTQLKDSKTITTITTPNPR----------------------TGGEHPAIISR----GPCNRLLLLYPGNQITILD 110 (343)
T ss_dssp TTEEEEEEESSSSCEEEEEEECCC----------------------TTCCCCSEEEE----CSTTEEEEEETTTEEEEEE
T ss_pred CCcEEEEECCCCcEEEEEecCCce----------------------eeeeCCceEEe----cCCCeEEEEEccCceEEee
Confidence 489999999999999988732211 11122323321 1234444445556666777
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCC
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTA 301 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~ 301 (382)
..+++.+...............+.+..++..++.+ ..++.|..+|.++++........... .
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~-----------------s~dg~i~~wd~~~~~~~~~~~~~~~~-~ 172 (343)
T 3lrv_A 111 SKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWA-----------------DNRGTIGFQSYEDDSQYIVHSAKSDV-E 172 (343)
T ss_dssp TTTCCEEEEEECCCSSCEEEEECCC---CCEEEEE-----------------ETTCCEEEEESSSSCEEEEECCCSSC-C
T ss_pred cCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEE-----------------eCCCcEEEEECCCCcEEEEEecCCCC-c
Confidence 77887776666432110000111111134444444 34588999999999986655433211 1
Q ss_pred CcceEEe-C-CEEEEeeecCCCcEEEEeCCCCcEe-EEEec-CCceecceEE-eCCEEEEEeCceeEeecCCccC
Q 040693 302 PGPVTVA-N-GVLFGGSTYRQGPIYAMDVKTGKIL-WSYDT-GATIYGGASV-SNGCIYMGNGYKVTVGFGNKNF 371 (382)
Q Consensus 302 ~~~~~~~-~-~~v~~~~~~~~g~l~~ld~~tG~il-w~~~~-~~~~~~~p~~-~~g~lyv~~~~g~~~~~~~~~~ 371 (382)
...+.+. + .++..++ .++.|..+|..+++.+ .+++. .......... .+++.+++.+++ .+.+|.+..
T Consensus 173 i~~~~~~pdg~~lasg~--~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~ 244 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYS--PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRK 244 (343)
T ss_dssp CCEEEECTTSCEEEEEC--TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTS
T ss_pred eEEEEECCCCCEEEEEc--CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCC
Confidence 2223332 3 4555555 4999999999999987 66655 2222223333 355555554555 566665543
No 198
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.58 E-value=0.0018 Score=62.85 Aligned_cols=192 Identities=11% Similarity=0.034 Sum_probs=103.4
Q ss_pred CcceEEEEECCCCcEEEEEecCCCc-ccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEc-------
Q 040693 141 HSNSLLALDLDTGKIVWYKQLGGYD-VWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQ------- 212 (382)
Q Consensus 141 ~~g~v~ald~~tG~~~W~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~------- 212 (382)
..+.|+.||.+|++++=+....... .+ .|++.-+| .++.+++..
T Consensus 162 ~~g~v~vlD~~T~~v~~~~~~~~~~~~~------------------~Yd~~~~p----------~~~~mvsS~wg~p~~~ 213 (462)
T 2ece_A 162 GPGGILMLDHYSFEPLGKWEIDRGDQYL------------------AYDFWWNL----------PNEVLVSSEWAVPNTI 213 (462)
T ss_dssp SCCEEEEECTTTCCEEEECCSBCTTCCC------------------CCCEEEET----------TTTEEEECBCCCHHHH
T ss_pred CCCeEEEEECCCCeEEEEEccCCCCccc------------------cceEEECC----------CCCEEEEccCcCcccc
Confidence 3489999999999999887754321 11 11111111 023444442
Q ss_pred ------------cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccce--eeeCCeEEEEec-CccccccccCCCCCCCCCc
Q 040693 213 ------------KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGA--ATDERRIYTNIA-NSQHKNFNLKPSKNSTIAG 277 (382)
Q Consensus 213 ------------~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~--~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~g 277 (382)
....|..+|.++++++-+++++..+ .+...... .-++..+|+... ... ..++
T Consensus 214 ~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g-~~P~~i~f~~~Pdg~~aYV~~e~~~~------------~Lss 280 (462)
T 2ece_A 214 EDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN-RMALELRPLHDPTKLMGFINMVVSLK------------DLSS 280 (462)
T ss_dssp TTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE-EEEEEEEECSSTTCCEEEEEEEEETT------------TCCE
T ss_pred ccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC-CccceeEeeECCCCCEEEEEEeeecc------------CCCc
Confidence 3578999999999988888875210 00011111 115677888743 000 1234
Q ss_pred eEEEE-------------ECCCCcEEeeec-CCC--C--CCCCcceEE--eCCEEEEeeecCCCcEEEEeCC---CCcEe
Q 040693 278 GWVAM-------------DASNGNVLWSTA-DPS--N--GTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVK---TGKIL 334 (382)
Q Consensus 278 ~v~a~-------------d~~tG~~~W~~~-~~~--~--~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~---tG~il 334 (382)
+|..+ |+.+.+..++.+ ++. . ......+.+ ++..+|++.. ..+.|.++|.. +.+++
T Consensus 281 ~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnr-g~d~VavfdV~d~~~~~lv 359 (462)
T 2ece_A 281 SIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLW-GIGEVRQYDISNPFKPVLT 359 (462)
T ss_dssp EEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEET-TTTEEEEEECSSTTSCEEE
T ss_pred eEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeC-CCCEEEEEEecCCCCcEEE
Confidence 55543 333333333211 000 0 011222223 4568998874 56789999864 45778
Q ss_pred EEEecCCce--------------ecceEE--eCCEEEEEeC-----------ceeEeecC--CccCCCC
Q 040693 335 WSYDTGATI--------------YGGASV--SNGCIYMGNG-----------YKVTVGFG--NKNFTSG 374 (382)
Q Consensus 335 w~~~~~~~~--------------~~~p~~--~~g~lyv~~~-----------~g~~~~~~--~~~~~~g 374 (382)
-+.++++.+ -....+ .+.+|||+++ ++.-..++ ..|..+|
T Consensus 360 ~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G 428 (462)
T 2ece_A 360 GKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG 428 (462)
T ss_dssp EEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC
T ss_pred EEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCCCC
Confidence 888776321 111222 5779999993 22223344 5588888
No 199
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.55 E-value=0.0039 Score=57.77 Aligned_cols=108 Identities=8% Similarity=-0.002 Sum_probs=60.3
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--e---CCeEEEEecCccccccccCCCCCCCCCceE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--D---ERRIYTNIANSQHKNFNLKPSKNSTIAGGW 279 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~---~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v 279 (382)
+..++++..++.+..+|..+++..+.....-. ........... + +..++.+ ..++.|
T Consensus 172 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~l~s~-----------------~~dg~i 233 (379)
T 3jrp_A 172 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYLASV-----------------SQDRTC 233 (379)
T ss_dssp TCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEE-----------------ETTSCE
T ss_pred CCEEEEEeCCCeEEEEEecCCCcceeeEEEEe-cccCcEeEEEECCCCCCCCeEEEE-----------------eCCCEE
Confidence 46788888899999999988876655432100 00112222222 3 3344443 345789
Q ss_pred EEEECCCCcEEeeecCCCCCCCCc---ceEE--eCCEEEEeeecCCCcEEEEeCCCCc
Q 040693 280 VAMDASNGNVLWSTADPSNGTAPG---PVTV--ANGVLFGGSTYRQGPIYAMDVKTGK 332 (382)
Q Consensus 280 ~a~d~~tG~~~W~~~~~~~~~~~~---~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ 332 (382)
..+|..+++..+............ .+.+ ++.+++.++. +|.|+.+|..++.
T Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 234 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG--DNKVTLWKENLEG 289 (379)
T ss_dssp EEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES--SSSEEEEEEEETT
T ss_pred EEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC--CCcEEEEeCCCCC
Confidence 999999986544433222111111 1222 2345666653 8888888877543
No 200
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.55 E-value=0.0066 Score=63.14 Aligned_cols=132 Identities=10% Similarity=0.138 Sum_probs=74.2
Q ss_pred ecEEEE--EccCcEEEEEeCCCCCeeeeeccCCCCCCC-Ccccceee-eCCeEEEEecCccccccccCCCCCCCCCceEE
Q 040693 205 HDIVVA--VQKSGFAWALDRDSGSLIWSMEAGPGGLGG-GAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWV 280 (382)
Q Consensus 205 ~~~v~~--~~~~g~l~ald~~tG~~~W~~~~~~~~~~g-~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~ 280 (382)
++.|++ ++..| |+.+|+++++..--.. .. ... ........ .++.+++++. +.|.
T Consensus 482 ~g~lWi~~~t~~G-l~~~d~~~~~~~~~~~-~~--~~~~~~~~~i~~d~~g~lWigt~------------------~Gl~ 539 (758)
T 3ott_A 482 EGNVWVLLYNNKG-IDKINPRTREVTKLFA-DE--LTGEKSPNYLLCDEDGLLWVGFH------------------GGVM 539 (758)
T ss_dssp TSCEEEEETTCSS-EEEEETTTTEEEEECT-TT--SCGGGCEEEEEECTTSCEEEEET------------------TEEE
T ss_pred CCCEEEEccCCCC-cEEEeCCCCceEEecC-CC--cCCCcccceEEECCCCCEEEEec------------------CceE
Confidence 456776 66666 9999999886553211 11 111 01111222 4678888732 4599
Q ss_pred EEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEe
Q 040693 281 AMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGN 358 (382)
Q Consensus 281 a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~ 358 (382)
.+|+++++...-.....+......+..+++.+|+++ ...|+.+|+++.+..- +.++...+..... .+|+||+++
T Consensus 540 ~~~~~~~~~~~~~~~gl~~~~i~~i~~~~g~lWi~t---~~Gl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~G~l~fG~ 615 (758)
T 3ott_A 540 RINPKDESQQSISFGSFSNNEILSMTCVKNSIWVST---TNGLWIIDRKTMDARQ-QNMTNKRFTSLLFDPKEDCVYLGG 615 (758)
T ss_dssp EECC--CCCCBCCCCC---CCEEEEEEETTEEEEEE---SSCEEEEETTTCCEEE-C--CCCCCSEEEEETTTTEEEEEC
T ss_pred EEecCCCceEEecccCCCccceEEEEECCCCEEEEC---CCCeEEEcCCCceeEE-ecCCCCceeeeEEECCCCcEEEec
Confidence 999988865422111111111223344678999998 5679999999887643 2333333333333 489999999
Q ss_pred Ccee
Q 040693 359 GYKV 362 (382)
Q Consensus 359 ~~g~ 362 (382)
.+|-
T Consensus 616 ~~Gl 619 (758)
T 3ott_A 616 ADGF 619 (758)
T ss_dssp BSEE
T ss_pred CCce
Confidence 8875
No 201
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.55 E-value=0.057 Score=50.57 Aligned_cols=146 Identities=12% Similarity=-0.020 Sum_probs=76.7
Q ss_pred cEEE-EEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeee--CCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 206 DIVV-AVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATD--ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 206 ~~v~-~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+.|| +....+.+..++.+ |+..-..-... .....+.+++ ++.+|++... ..+.|..+
T Consensus 128 g~ly~~d~~~~~I~~~~~d-G~~~~~l~~~~----l~~P~~iavdp~~g~ly~td~~---------------~~~~I~r~ 187 (349)
T 3v64_C 128 DKLYWTDSGTSRIEVANLD-GAHRKVLLWQS----LEKPRAIALHPMEGTIYWTDWG---------------NTPRIEAS 187 (349)
T ss_dssp TEEEEEETTTTEEEEEETT-SCSCEEEECTT----CSCEEEEEEETTTTEEEEEECS---------------SSCEEEEE
T ss_pred CeEEEEcCCCCeEEEEcCC-CCceEEEEeCC----CCCcceEEEecCcCeEEEeccC---------------CCCEEEEE
Confidence 3444 44456778888876 43322211110 0122334444 7889987432 12678888
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEE-ecCCceecceEEeCCEEEEEeC
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSY-DTGATIYGGASVSNGCIYMGNG 359 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~-~~~~~~~~~p~~~~g~lyv~~~ 359 (382)
+.......-..... ......++++ ++++|++.. ..+.|+.+|.+ |+..-.+ ......-...++.+++||++..
T Consensus 188 ~~dG~~~~~~~~~~--~~~PnGla~d~~~~~lY~aD~-~~~~I~~~~~d-G~~~~~~~~~~~~~P~giav~~~~ly~td~ 263 (349)
T 3v64_C 188 SMDGSGRRIIADTH--LFWPNGLTIDYAGRRMYWVDA-KHHVIERANLD-GSHRKAVISQGLPHPFAITVFEDSLYWTDW 263 (349)
T ss_dssp ETTSCSCEESCCSS--CSCEEEEEEETTTTEEEEEET-TTTEEEEEETT-SCSCEEEECSSCSSEEEEEEETTEEEEEET
T ss_pred eCCCCCcEEEEECC--CCCcceEEEeCCCCEEEEEEC-CCCEEEEEeCC-CCceEEEEeCCCCCceEEEEECCEEEEecC
Confidence 87543222111111 1122334554 689999875 56789999987 4332222 2211222345568999999986
Q ss_pred ceeEeecCCccCCCCCeE
Q 040693 360 YKVTVGFGNKNFTSGTSL 377 (382)
Q Consensus 360 ~g~~~~~~~~~~~~g~~l 377 (382)
.... +..++..+|+.+
T Consensus 264 ~~~~--V~~~~~~~G~~~ 279 (349)
T 3v64_C 264 HTKS--INSANKFTGKNQ 279 (349)
T ss_dssp TTTE--EEEEETTTCCSC
T ss_pred CCCe--EEEEEccCCCcc
Confidence 5442 344555556543
No 202
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.53 E-value=0.0094 Score=55.84 Aligned_cols=175 Identities=8% Similarity=0.037 Sum_probs=100.0
Q ss_pred ceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceE-EEeeeCceeecEEEEEccCcEEEEEe
Q 040693 143 NSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMM-LSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 143 g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
+.|..+|..+++..-........ .++. .....++ +..++++..++.+..+|
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~h~--------------------------~~v~~~~~~~~~--~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGMGPG--------------------------DAITGMKFNQFN--TNQLFVSSIRGATTLRD 147 (383)
T ss_dssp SCEEEEETTSTTCEEEECCCSTT--------------------------CBEEEEEEETTE--EEEEEEEETTTEEEEEE
T ss_pred CeEEEEeCCCcccceeeecCCcC--------------------------CceeEEEeCCCC--CCEEEEEeCCCEEEEEE
Confidence 88999999999888777643321 1111 1122212 56788889999999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCC
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNG 299 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~ 299 (382)
..+ +.+-.+..... .......... ++..++.+ ..++.|..+|+ +++.+.+.......
T Consensus 148 ~~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-----------------~~d~~i~i~d~-~~~~~~~~~~h~~~ 206 (383)
T 3ei3_B 148 FSG-SVIQVFAKTDS--WDYWYCCVDVSVSRQMLATG-----------------DSTGRLLLLGL-DGHEIFKEKLHKAK 206 (383)
T ss_dssp TTS-CEEEEEECCCC--SSCCEEEEEEETTTTEEEEE-----------------ETTSEEEEEET-TSCEEEEEECSSSC
T ss_pred CCC-CceEEEeccCC--CCCCeEEEEECCCCCEEEEE-----------------CCCCCEEEEEC-CCCEEEEeccCCCc
Confidence 985 44444432211 0011122222 45555555 34588999998 68888877654321
Q ss_pred CCCcceEEe--CC-EEEEeeecCCCcEEEEeCCC----CcEeEEEecCCceecceEE-e-CCEEEEEeCceeEeecCCcc
Q 040693 300 TAPGPVTVA--NG-VLFGGSTYRQGPIYAMDVKT----GKILWSYDTGATIYGGASV-S-NGCIYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 300 ~~~~~~~~~--~~-~v~~~~~~~~g~l~~ld~~t----G~ilw~~~~~~~~~~~p~~-~-~g~lyv~~~~g~~~~~~~~~ 370 (382)
...+.+. +. +++.++ .++.|..+|..+ ++.+........ ..+..+ . +++++++.+....+.+|.+.
T Consensus 207 --v~~~~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 207 --VTHAEFNPRCDWLMATSS--VDATVKLWDLRNIKDKNSYIAEMPHEKP-VNAAYFNPTDSTKLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp --EEEEEECSSCTTEEEEEE--TTSEEEEEEGGGCCSTTCEEEEEECSSC-EEEEEECTTTSCEEEEEESSSEEEEEETT
T ss_pred --EEEEEECCCCCCEEEEEe--CCCEEEEEeCCCCCcccceEEEecCCCc-eEEEEEcCCCCCEEEEEcCCCcEEEEECC
Confidence 2222232 33 666666 489999999987 667766643332 233333 2 45444444433345566554
Q ss_pred C
Q 040693 371 F 371 (382)
Q Consensus 371 ~ 371 (382)
.
T Consensus 282 ~ 282 (383)
T 3ei3_B 282 D 282 (383)
T ss_dssp B
T ss_pred C
Confidence 3
No 203
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.53 E-value=0.05 Score=49.63 Aligned_cols=126 Identities=17% Similarity=0.198 Sum_probs=72.9
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
..++.+|..+. .|+.-.+.+ ........++.++.||+....... .....+..+|+++. .|+.-
T Consensus 137 ~~~~~yd~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~-----------~~~~~~~~yd~~~~--~W~~~ 199 (308)
T 1zgk_A 137 NSVERYEPERD--EWHLVAPML--TRRIGVGVAVLNRLLYAVGGFDGT-----------NRLNSAECYYPERN--EWRMI 199 (308)
T ss_dssp CCEEEEETTTT--EEEECCCCS--SCCBSCEEEEETTEEEEECCBCSS-----------CBCCCEEEEETTTT--EEEEC
T ss_pred ccEEEECCCCC--eEeECCCCC--ccccceEEEEECCEEEEEeCCCCC-----------CcCceEEEEeCCCC--eEeeC
Confidence 35889998865 577643321 122223334467888886433110 11366999999876 57753
Q ss_pred --CCCCCCCCcceEEeCCEEEEeeecC----CCcEEEEeCCCCcEeEEEec--CCc-eecceEEeCCEEEEEeCc
Q 040693 295 --DPSNGTAPGPVTVANGVLFGGSTYR----QGPIYAMDVKTGKILWSYDT--GAT-IYGGASVSNGCIYMGNGY 360 (382)
Q Consensus 295 --~~~~~~~~~~~~~~~~~v~~~~~~~----~g~l~~ld~~tG~ilw~~~~--~~~-~~~~p~~~~g~lyv~~~~ 360 (382)
.+... ......+.++.+|+..... ...++.+|+++. .|+.-. +.. ...+.++.+++||+..+.
T Consensus 200 ~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 271 (308)
T 1zgk_A 200 TAMNTIR-SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE--TWTFVAPMKHRRSALGITVHQGRIYVLGGY 271 (308)
T ss_dssp CCCSSCC-BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CCCCCcc-ccceEEEECCEEEEEeCCCCCCccceEEEEeCCCC--cEEECCCCCCCccceEEEEECCEEEEEcCc
Confidence 23222 2333345577777754211 256999999865 476532 222 334556689999998764
No 204
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.53 E-value=0.0051 Score=63.33 Aligned_cols=137 Identities=13% Similarity=0.133 Sum_probs=66.8
Q ss_pred EEEEEeCCC-CCeeeeeccCCC-CCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeee
Q 040693 216 FAWALDRDS-GSLIWSMEAGPG-GLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWST 293 (382)
Q Consensus 216 ~l~ald~~t-G~~~W~~~~~~~-~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~ 293 (382)
.|+.+|.++ |+.......... .......| -++..|++...+.. .....|+.+|+++|+..-..
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---pDg~~l~~~~~~~~------------~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW---RDPQHLSFQRQSRD------------QKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE---EETTEEEEEEEETT------------SSEEEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe---CCCCEEEEEEeccc------------CCeEEEEEEECCCCceEEEE
Confidence 788899998 886654321000 00011122 36777776543211 23467999999999876555
Q ss_pred cCCCCC---CCCcceEEeC-CEEEEeeecCCC--cEEEEeCCCCcEeEEEecCCceecce-EE--eCCEEEEEeCcee--
Q 040693 294 ADPSNG---TAPGPVTVAN-GVLFGGSTYRQG--PIYAMDVKTGKILWSYDTGATIYGGA-SV--SNGCIYMGNGYKV-- 362 (382)
Q Consensus 294 ~~~~~~---~~~~~~~~~~-~~v~~~~~~~~g--~l~~ld~~tG~ilw~~~~~~~~~~~p-~~--~~g~lyv~~~~g~-- 362 (382)
...... ....+....+ .+++.+. .++ .|+.+|.+ |+ +.++.........+ .+ .+..||+....+.
T Consensus 329 ~~~~~~~~~~~~~~~~spdg~~~~~~~--~~g~~~l~~~~~~-~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~ 404 (741)
T 2ecf_A 329 HETSPTWVPLHNSLRFLDDGSILWSSE--RTGFQHLYRIDSK-GK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESAR 404 (741)
T ss_dssp EEECSSCCCCCSCCEECTTSCEEEEEC--TTSSCEEEEECSS-SC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTT
T ss_pred EcCCCCcCCcCCceEECCCCeEEEEec--CCCccEEEEEcCC-CC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCc
Confidence 432211 0112222234 4444444 344 68888865 44 33332222222222 13 2345666555432
Q ss_pred EeecCCccC
Q 040693 363 TVGFGNKNF 371 (382)
Q Consensus 363 ~~~~~~~~~ 371 (382)
...+|.++.
T Consensus 405 ~~~l~~~~~ 413 (741)
T 2ecf_A 405 ESQIYAVPL 413 (741)
T ss_dssp CBEEEEEET
T ss_pred eEEEEEEEc
Confidence 345565554
No 205
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.53 E-value=0.0092 Score=55.57 Aligned_cols=175 Identities=11% Similarity=0.107 Sum_probs=87.5
Q ss_pred cceEEEEECC---CCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEE-EccC-cE
Q 040693 142 SNSLLALDLD---TGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVA-VQKS-GF 216 (382)
Q Consensus 142 ~g~v~ald~~---tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~-~~~~-g~ 216 (382)
...|+++|+. ||+++|...+...... +-. .+ +. ......++..+. ++.+|+ .+.. +.
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~-~~~--~~------------g~-~~~~~nDvavD~--~GnaYVt~s~~~~~ 160 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDE-FEK--KA------------GK-RPFGVVQSAQDR--DGNSYVAFALGMPA 160 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHH-HHH--HH------------SS-CCEEEEEEEECT--TSCEEEEEEESSCE
T ss_pred CCEEEEEcCCcCCCCCEEEEecCcccccc-ccc--cc------------cc-cccCCceeEECC--CCCEEEeCCCCCCe
Confidence 4789999999 9999999987532100 000 00 00 001133443333 233443 5666 88
Q ss_pred EEEEeCCCCC--eeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEee
Q 040693 217 AWALDRDSGS--LIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWS 292 (382)
Q Consensus 217 l~ald~~tG~--~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~ 292 (382)
|+-+|++ |+ ..|..+.+.. .......+.++ ++.++++. ...+.|++||+++ ...|.
T Consensus 161 I~rV~pd-G~~~~~~~~~~~~~-~~~~G~nGIv~~pdg~~Liv~-----------------~~~g~L~~fD~~~-pv~~~ 220 (334)
T 2p9w_A 161 IARVSAD-GKTVSTFAWESGNG-GQRPGYSGITFDPHSNKLIAF-----------------GGPRALTAFDVSK-PYAWP 220 (334)
T ss_dssp EEEECTT-SCCEEEEEECCCCS-SSCCSCSEEEEETTTTEEEEE-----------------SSSSSEEEEECSS-SSCCC
T ss_pred EEEEeCC-CCEEeeeeecCCCc-ccccCcceEEEeCCCCEEEEE-----------------cCCCeEEEEcCCC-Cccee
Confidence 9999987 54 3365443221 11111223333 46667665 2368899999884 33344
Q ss_pred ecCC--C--CCCCC--c--ceEEeCC-EEEEeeecCCCcEEEEeCCCCcEeEEEe-----cCCc----eecceEE----e
Q 040693 293 TADP--S--NGTAP--G--PVTVANG-VLFGGSTYRQGPIYAMDVKTGKILWSYD-----TGAT----IYGGASV----S 350 (382)
Q Consensus 293 ~~~~--~--~~~~~--~--~~~~~~~-~v~~~~~~~~g~l~~ld~~tG~ilw~~~-----~~~~----~~~~p~~----~ 350 (382)
++.. . ..... . |+ ..++ .+++... ...+..|-.++| |+.. .+.. .....++ .
T Consensus 221 v~~~~~G~~~~~~~~dgilp~-~~~G~vllV~~~--~~~~~~l~S~Dg---W~sa~~~g~~~~~~~~~g~tt~t~~~~~~ 294 (334)
T 2p9w_A 221 EPVKINGDFGTLSGTEKIVTV-PVGNESVLVGAR--APYAISFRSWDN---WKSANIKKTKRSELQNSGFTAVADYYQGS 294 (334)
T ss_dssp EECEESSCCCCCTTEEEEEEE-EETTEEEEEEEE--TTEEEEEECSST---TSEEEEEEEECGGGGSSCEEEEEEEEETT
T ss_pred ecccccCCcccccCccccccc-ccCCEEEEEEcC--CCCEEEEECCCC---cceeEEeeeecCccccCceeEEEEecccc
Confidence 5432 1 01111 1 22 2344 4466654 445566655555 4331 1111 1222222 5
Q ss_pred CCEEEEEeCc
Q 040693 351 NGCIYMGNGY 360 (382)
Q Consensus 351 ~g~lyv~~~~ 360 (382)
++++|+.+..
T Consensus 295 ~~~iYvv~~~ 304 (334)
T 2p9w_A 295 EQGLYAVSAF 304 (334)
T ss_dssp EEEEEEEECC
T ss_pred CCeEEEEeee
Confidence 7999999864
No 206
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.52 E-value=0.05 Score=49.34 Aligned_cols=103 Identities=13% Similarity=0.142 Sum_probs=58.4
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
..++.+|..+. .|+.-...+ ........++.++.||+..+.... .....+..+|+++. .|+.-
T Consensus 173 ~~~~~yd~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~-----------~~~~~~~~yd~~~~--~W~~~ 235 (302)
T 2xn4_A 173 STVECYNATTN--EWTYIAEMS--TRRSGAGVGVLNNLLYAVGGHDGP-----------LVRKSVEVYDPTTN--AWRQV 235 (302)
T ss_dssp CCEEEEETTTT--EEEEECCCS--SCCBSCEEEEETTEEEEECCBSSS-----------SBCCCEEEEETTTT--EEEEE
T ss_pred cEEEEEeCCCC--cEEECCCCc--cccccccEEEECCEEEEECCCCCC-----------cccceEEEEeCCCC--CEeeC
Confidence 35889998865 577643221 112223334467788876432110 12356999999886 47653
Q ss_pred --CCCCCCCCcceEEeCCEEEEeeecC----CCcEEEEeCCCCcEeEEE
Q 040693 295 --DPSNGTAPGPVTVANGVLFGGSTYR----QGPIYAMDVKTGKILWSY 337 (382)
Q Consensus 295 --~~~~~~~~~~~~~~~~~v~~~~~~~----~g~l~~ld~~tG~ilw~~ 337 (382)
.+... ........++.+|+..... ...++++|+++.+ |+.
T Consensus 236 ~~~~~~r-~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~ 281 (302)
T 2xn4_A 236 ADMNMCR-RNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK--WTV 281 (302)
T ss_dssp CCCSSCC-BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE--EEE
T ss_pred CCCCCcc-ccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCe--EEE
Confidence 33322 2333445577777654211 2358999998764 765
No 207
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.51 E-value=0.0061 Score=56.19 Aligned_cols=164 Identities=10% Similarity=0.025 Sum_probs=83.2
Q ss_pred cEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-e-CCeEEEEecCcccc--cc--ccCCCCCCCCCceE
Q 040693 206 DIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-D-ERRIYTNIANSQHK--NF--NLKPSKNSTIAGGW 279 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~-~~~v~~~~~~~~~~--~~--~~~~~~~~~~~g~v 279 (382)
+.|++++..+.++.+|.++|+...-...... .........++ . ++.+|++....... .+ .+. .....+.|
T Consensus 92 g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~-~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~---~~~~~g~v 167 (322)
T 2fp8_A 92 NQLYIVDCYYHLSVVGSEGGHATQLATSVDG-VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD---TSDKTGRL 167 (322)
T ss_dssp TEEEEEETTTEEEEECTTCEECEEEESEETT-EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH---HTCCCEEE
T ss_pred CcEEEEECCCCEEEEeCCCCEEEEecccCCC-CcccccceEEEecCCCEEEEECCcccccccccceehc---ccCCCceE
Confidence 5677765555599999887754322111100 00001112233 3 57899875431100 00 000 00234789
Q ss_pred EEEECCCCcEEeeec-CCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCC---cEeEEEecCCceecceEE-eCC
Q 040693 280 VAMDASNGNVLWSTA-DPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTG---KILWSYDTGATIYGGASV-SNG 352 (382)
Q Consensus 280 ~a~d~~tG~~~W~~~-~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG---~ilw~~~~~~~~~~~p~~-~~g 352 (382)
+.+|+.+|+..-... ... ..-+.+. ++.+|++.. ..+.|+.++.++. +..--...++ -...++ .+|
T Consensus 168 ~~~d~~~~~~~~~~~~~~~----p~gia~~~dg~~lyv~d~-~~~~I~~~~~~~~~~~~~~~~~~~~g--P~gi~~d~~G 240 (322)
T 2fp8_A 168 IKYDPSTKETTLLLKELHV----PGGAEVSADSSFVLVAEF-LSHQIVKYWLEGPKKGTAEVLVKIPN--PGNIKRNADG 240 (322)
T ss_dssp EEEETTTTEEEEEEEEESC----CCEEEECTTSSEEEEEEG-GGTEEEEEESSSTTTTCEEEEEECSS--EEEEEECTTS
T ss_pred EEEeCCCCEEEEeccCCcc----CcceEECCCCCEEEEEeC-CCCeEEEEECCCCcCCccceEEeCCC--CCCeEECCCC
Confidence 999999887543222 111 1223343 357888763 4688999998752 2211112222 122233 467
Q ss_pred EEEEEeCc--------eeEeecCCccCCCCCeEEEEE
Q 040693 353 CIYMGNGY--------KVTVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 353 ~lyv~~~~--------g~~~~~~~~~~~~g~~l~~~~ 381 (382)
+|||+... +....++.+++ .|+.+-.|.
T Consensus 241 ~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~ 276 (322)
T 2fp8_A 241 HFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIP 276 (322)
T ss_dssp CEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEE
T ss_pred CEEEEecCcccccccCCCccEEEEECC-CCCEEEEEE
Confidence 89999765 22334566776 477776553
No 208
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.50 E-value=0.012 Score=52.00 Aligned_cols=55 Identities=13% Similarity=0.088 Sum_probs=38.9
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|+.+|..+|++.......... ..+.+.+++..++++. +
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~~v--------------~~~~~spdg~~l~~~~-~------------------------ 61 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPELF--------------EAPNWSPDGKYLLLNS-E------------------------ 61 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESSCC--------------EEEEECTTSSEEEEEE-T------------------------
T ss_pred ceeEEEEeCCCCceeeeccCCcce--------------EeeEECCCCCEEEEEc-C------------------------
Confidence 789999999999987554431111 2466777777777653 2
Q ss_pred CCCCCCCCcceEEEEECCC-CcEE
Q 040693 134 KCIEPENHSNSLLALDLDT-GKIV 156 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~t-G~~~ 156 (382)
+.|+.+|..+ |+..
T Consensus 62 ---------~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 62 ---------GLLYRLSLAGDPSPE 76 (297)
T ss_dssp ---------TEEEEEESSSCCSCE
T ss_pred ---------CeEEEEeCCCCCCce
Confidence 7899999998 7765
No 209
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.50 E-value=0.041 Score=50.45 Aligned_cols=123 Identities=15% Similarity=0.204 Sum_probs=70.8
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
..++.+|..+. .|+.-.+.+ ........++.++.||+..+.... .....+..+|+++.+ |+.-
T Consensus 175 ~~~~~yd~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~-----------~~~~~~~~yd~~~~~--W~~~ 237 (318)
T 2woz_A 175 NRVFIYNPKKG--DWKDLAPMK--TPRSMFGVAIHKGKIVIAGGVTED-----------GLSASVEAFDLKTNK--WEVM 237 (318)
T ss_dssp CCEEEEETTTT--EEEEECCCS--SCCBSCEEEEETTEEEEEEEEETT-----------EEEEEEEEEETTTCC--EEEC
T ss_pred ceEEEEcCCCC--EEEECCCCC--CCcccceEEEECCEEEEEcCcCCC-----------CccceEEEEECCCCe--EEEC
Confidence 35999999875 587654321 122223334467788876432110 112568899998874 7764
Q ss_pred --CCCCCCCCcceEEeCCEEEEeeec-------------CCCcEEEEeCCCCcEeEEEecCC-ceecceEEeCCEEEEE
Q 040693 295 --DPSNGTAPGPVTVANGVLFGGSTY-------------RQGPIYAMDVKTGKILWSYDTGA-TIYGGASVSNGCIYMG 357 (382)
Q Consensus 295 --~~~~~~~~~~~~~~~~~v~~~~~~-------------~~g~l~~ld~~tG~ilw~~~~~~-~~~~~p~~~~g~lyv~ 357 (382)
.+... ......+.++.+|+.... ....++++|+++. .|+.-.+. ....+.++.++++|+.
T Consensus 238 ~~~p~~r-~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~~r~~~~~~~~~~~iyi~ 313 (318)
T 2woz_A 238 TEFPQER-SSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK--EWAGMLKEIRYASGASCLATRLNLF 313 (318)
T ss_dssp CCCSSCC-BSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT--EEEEEESCCGGGTTCEEEEEEEEGG
T ss_pred CCCCCcc-cceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC--EehhhcccccccccceeeCCEEEEE
Confidence 23222 233344556777765321 1256899999865 47654333 3445566788888875
No 210
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.50 E-value=0.009 Score=57.41 Aligned_cols=101 Identities=12% Similarity=0.011 Sum_probs=59.3
Q ss_pred ecEEEEEccCcEEEEEeCCCC---CeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceE
Q 040693 205 HDIVVAVQKSGFAWALDRDSG---SLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGW 279 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG---~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v 279 (382)
...++++..++.+..+|..++ +.+....... ........ ++..++++. ..++.|
T Consensus 244 ~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~-----~~v~~i~~~p~~~~~l~tg----------------~~dg~v 302 (430)
T 2xyi_A 244 ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT-----AEVNCLSFNPYSEFILATG----------------SADKTV 302 (430)
T ss_dssp TTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS-----SCEEEEEECSSCTTEEEEE----------------ETTSEE
T ss_pred CCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC-----CCeEEEEeCCCCCCEEEEE----------------eCCCeE
Confidence 567788888999999999987 4555554221 11122222 344344332 345889
Q ss_pred EEEECCC-CcEEeeecCCCCCCCCcceEEe--CC-EEEEeeecCCCcEEEEeCCC
Q 040693 280 VAMDASN-GNVLWSTADPSNGTAPGPVTVA--NG-VLFGGSTYRQGPIYAMDVKT 330 (382)
Q Consensus 280 ~a~d~~t-G~~~W~~~~~~~~~~~~~~~~~--~~-~v~~~~~~~~g~l~~ld~~t 330 (382)
..+|.++ ++++.+...... ....+... +. +++.++ .++.|..+|..+
T Consensus 303 ~vwd~~~~~~~~~~~~~h~~--~v~~i~~sp~~~~~l~s~~--~d~~i~iwd~~~ 353 (430)
T 2xyi_A 303 ALWDLRNLKLKLHSFESHKD--EIFQVQWSPHNETILASSG--TDRRLHVWDLSK 353 (430)
T ss_dssp EEEETTCTTSCSEEEECCSS--CEEEEEECSSCTTEEEEEE--TTSCCEEEEGGG
T ss_pred EEEeCCCCCCCeEEeecCCC--CEEEEEECCCCCCEEEEEe--CCCcEEEEeCCC
Confidence 9999998 455555543321 11222232 33 444454 489999999876
No 211
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.48 E-value=0.027 Score=52.09 Aligned_cols=173 Identities=10% Similarity=0.009 Sum_probs=88.9
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
++.|..+|..+|+.+-++......+. -..+.++ +..|++++.|+.+..+|
T Consensus 97 D~~v~lwd~~~~~~~~~~~~h~~~v~---------------------------~v~~sp~---~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 97 DKTLRLWDLRTGTTYKRFVGHQSEVY---------------------------SVAFSPD---NRQILSAGAEREIKLWN 146 (343)
T ss_dssp TSEEEEEETTSSCEEEEEECCCSCEE---------------------------EEEECSS---TTEEEEEETTSCEEEEE
T ss_pred CCcEEEEECCCCcEEEEEcCCCCcEE---------------------------EEEECCC---CCEEEEEcCCCEEEEEe
Confidence 48999999999998877654322111 1112222 35778888899999999
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceee--e----------CCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcE
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAAT--D----------ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNV 289 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~--~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~ 289 (382)
.. ++.......... .......... + ...+..+ ..++.|..+| .+++.
T Consensus 147 ~~-~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~-----------------~~d~~i~iwd-~~~~~ 205 (343)
T 2xzm_R 147 IL-GECKFSSAEKEN--HSDWVSCVRYSPIMKSANKVQPFAPYFASV-----------------GWDGRLKVWN-TNFQI 205 (343)
T ss_dssp SS-SCEEEECCTTTS--CSSCEEEEEECCCCCSCSCCCSSCCEEEEE-----------------ETTSEEEEEE-TTTEE
T ss_pred cc-CCceeeeecccC--CCceeeeeeeccccccccccCCCCCEEEEE-----------------cCCCEEEEEc-CCCce
Confidence 87 333332221100 0000011110 1 1233333 3457899999 45666
Q ss_pred EeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCC-CCcEeEEEecCCceecceEE-eCCEEEEEeCceeEee
Q 040693 290 LWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVK-TGKILWSYDTGATIYGGASV-SNGCIYMGNGYKVTVG 365 (382)
Q Consensus 290 ~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~-tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~~g~~~~ 365 (382)
..+....... ...+.+ ++.++..++ .++.|...|.. .++....+..+..+ ....+ .+++++++..++. +.
T Consensus 206 ~~~~~~h~~~--v~~~~~s~~g~~l~sgs--~dg~v~iwd~~~~~~~~~~~~~~~~v-~~v~~sp~~~~la~~~d~~-v~ 279 (343)
T 2xzm_R 206 RYTFKAHESN--VNHLSISPNGKYIATGG--KDKKLLIWDILNLTYPQREFDAGSTI-NQIAFNPKLQWVAVGTDQG-VK 279 (343)
T ss_dssp EEEEECCSSC--EEEEEECTTSSEEEEEE--TTCEEEEEESSCCSSCSEEEECSSCE-EEEEECSSSCEEEEEESSC-EE
T ss_pred eEEEcCcccc--ceEEEECCCCCEEEEEc--CCCeEEEEECCCCcccceeecCCCcE-EEEEECCCCCEEEEECCCC-EE
Confidence 6555443211 122223 234666666 48999999984 45555554443322 22222 2444444443333 45
Q ss_pred cCCccC
Q 040693 366 FGNKNF 371 (382)
Q Consensus 366 ~~~~~~ 371 (382)
+|.+..
T Consensus 280 iw~~~~ 285 (343)
T 2xzm_R 280 IFNLMT 285 (343)
T ss_dssp EEESSS
T ss_pred EEEeCC
Confidence 555443
No 212
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.47 E-value=0.039 Score=56.78 Aligned_cols=102 Identities=11% Similarity=0.045 Sum_probs=58.5
Q ss_pred CceEEEEECCC------CcEEeeecCCCCCCCCcceEEeCCEEEEeeec--CCCcEEEEeCCCCcE-eEEEecCC-c--e
Q 040693 276 AGGWVAMDASN------GNVLWSTADPSNGTAPGPVTVANGVLFGGSTY--RQGPIYAMDVKTGKI-LWSYDTGA-T--I 343 (382)
Q Consensus 276 ~g~v~a~d~~t------G~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~g~l~~ld~~tG~i-lw~~~~~~-~--~ 343 (382)
...|+.+|+.+ |+..++.-..........+..+++.+|+.+.. ....|+.+|.++++. .|+.-++. . .
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 337 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDV 337 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCe
Confidence 46799999987 64333322111111223344467777776641 134699999988753 45543332 1 3
Q ss_pred ecceEEe-CCEEEEEeCceeEeecCCccCCCCCeE
Q 040693 344 YGGASVS-NGCIYMGNGYKVTVGFGNKNFTSGTSL 377 (382)
Q Consensus 344 ~~~p~~~-~g~lyv~~~~g~~~~~~~~~~~~g~~l 377 (382)
...+... +++|++....+....++.++..+|+.+
T Consensus 338 ~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~ 372 (710)
T 2xdw_A 338 LEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALL 372 (710)
T ss_dssp EEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred EEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEE
Confidence 4445555 788888766555455666666666644
No 213
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.47 E-value=0.06 Score=48.90 Aligned_cols=103 Identities=14% Similarity=0.168 Sum_probs=58.3
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
..++.+|.++. .|+.-.+.+ ........++.++.||+..+.... .....+..+|+++.+ |+.-
T Consensus 169 ~~~~~yd~~~~--~W~~~~~~p--~~r~~~~~~~~~~~i~v~GG~~~~-----------~~~~~~~~yd~~~~~--W~~~ 231 (306)
T 3ii7_A 169 NSCEVYDPATE--TWTELCPMI--EARKNHGLVFVKDKIFAVGGQNGL-----------GGLDNVEYYDIKLNE--WKMV 231 (306)
T ss_dssp CCEEEEETTTT--EEEEECCCS--SCCBSCEEEEETTEEEEECCEETT-----------EEBCCEEEEETTTTE--EEEC
T ss_pred ceEEEeCCCCC--eEEECCCcc--chhhcceEEEECCEEEEEeCCCCC-----------CCCceEEEeeCCCCc--EEEC
Confidence 45899999876 577654321 122233334467788876432110 113569999998874 7754
Q ss_pred --CCCCCCCCcceEEeCCEEEEeeec----CCCcEEEEeCCCCcEeEEE
Q 040693 295 --DPSNGTAPGPVTVANGVLFGGSTY----RQGPIYAMDVKTGKILWSY 337 (382)
Q Consensus 295 --~~~~~~~~~~~~~~~~~v~~~~~~----~~g~l~~ld~~tG~ilw~~ 337 (382)
.+... ......+.++.+|+.... ....++++|+++.+ |+.
T Consensus 232 ~~~p~~r-~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~--W~~ 277 (306)
T 3ii7_A 232 SPMPWKG-VTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDK--WVA 277 (306)
T ss_dssp CCCSCCB-SCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTE--EEE
T ss_pred CCCCCCc-cceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCe--EEe
Confidence 33222 233334457767665421 12568999998654 654
No 214
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.46 E-value=0.066 Score=49.29 Aligned_cols=145 Identities=12% Similarity=0.021 Sum_probs=77.1
Q ss_pred cEEEE-EccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 206 DIVVA-VQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 206 ~~v~~-~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+.||+ ....+.+..+|.+......-.... .....+.++ .++.+|++... ..+.|+.+
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~-----~~~P~~iavdp~~g~ly~~d~~---------------~~~~I~~~ 148 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFREN-----GSKPRAIVVDPVHGFMYWTDWG---------------TPAKIKKG 148 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECT-----TCCEEEEEEETTTTEEEEEECS---------------SSCEEEEE
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECC-----CCCcceEEeCCCCCEEEEEccC---------------CCCeEEEE
Confidence 34444 455678888887733222222211 112233444 37889987422 12578888
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEE-ecCC--ceecceEEeCCEEEEE
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSY-DTGA--TIYGGASVSNGCIYMG 357 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~-~~~~--~~~~~p~~~~g~lyv~ 357 (382)
+.. |+..-..-... ......+.++ ++++|++.. ..+.|..+|.+ |+.+-.+ .... ..-...++.+++||++
T Consensus 149 ~~d-G~~~~~~~~~~-~~~P~gla~d~~~~~lY~~D~-~~~~I~~~d~d-g~~~~~~~~~~~~~~~P~giav~~~~ly~~ 224 (316)
T 1ijq_A 149 GLN-GVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDS-KLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVFEDKVFWT 224 (316)
T ss_dssp ETT-SCCEEEEECSS-CSCEEEEEEETTTTEEEEEET-TTTEEEEEETT-SCSCEEEEECTTTTSSEEEEEEETTEEEEE
T ss_pred cCC-CCCeEEEEECC-CCCceEEEEeccCCEEEEEEC-CCCeEEEEecC-CCceEEEeecCCccCCcEEEEEECCEEEEE
Confidence 874 43322211111 1122344555 689999875 56789999987 4333222 2111 1223445688999999
Q ss_pred eCceeEeecCCccCCCCCe
Q 040693 358 NGYKVTVGFGNKNFTSGTS 376 (382)
Q Consensus 358 ~~~g~~~~~~~~~~~~g~~ 376 (382)
...... ++.++..+|+.
T Consensus 225 d~~~~~--V~~~~~~~g~~ 241 (316)
T 1ijq_A 225 DIINEA--IFSANRLTGSD 241 (316)
T ss_dssp ETTTTE--EEEEETTTCCC
T ss_pred ECCCCe--EEEEeCCCCcc
Confidence 865442 34455555654
No 215
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.44 E-value=0.017 Score=54.14 Aligned_cols=146 Identities=13% Similarity=0.097 Sum_probs=72.2
Q ss_pred cCcEEEEEeCC-CCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECC-CCc
Q 040693 213 KSGFAWALDRD-SGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS-NGN 288 (382)
Q Consensus 213 ~~g~l~ald~~-tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~-tG~ 288 (382)
.++.+..++.. +|++.-....-.. ..+.......+ ++..+|++.. ..+.|..+|.. +|+
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~spdG~~l~~~~~----------------~~~~v~~~~~~~~g~ 179 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEY-QENTGIHGMVFDPTETYLYSADL----------------TANKLWTHRKLASGE 179 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEEC-CTTCCEEEEEECTTSSEEEEEET----------------TTTEEEEEEECTTSC
T ss_pred CCceEEEEccCCCCcCcceEeeEEe-CCCCcceEEEECCCCCEEEEEcC----------------CCCEEEEEEECCCCC
Confidence 46667777765 5765432221000 00112222222 5567777521 23679999998 887
Q ss_pred EEe--eecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEe--CCCCcEeE---EEe-cCCc------------eecc
Q 040693 289 VLW--STADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMD--VKTGKILW---SYD-TGAT------------IYGG 346 (382)
Q Consensus 289 ~~W--~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld--~~tG~ilw---~~~-~~~~------------~~~~ 346 (382)
..- +...+........+.+ ++.++|+... .++.+..++ .++|+... +.. ++.. ....
T Consensus 180 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~-~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 258 (365)
T 1jof_A 180 VELVGSVDAPDPGDHPRWVAMHPTGNYLYALME-AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRAD 258 (365)
T ss_dssp EEEEEEEECSSTTCCEEEEEECTTSSEEEEEET-TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEE
T ss_pred EEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC-CCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccccccccc
Confidence 643 2332210011112233 2457887763 356777664 55788643 232 2211 1223
Q ss_pred eE-E-eC-CEEEEEeCcee-----EeecCCccCCCCCeE
Q 040693 347 AS-V-SN-GCIYMGNGYKV-----TVGFGNKNFTSGTSL 377 (382)
Q Consensus 347 p~-~-~~-g~lyv~~~~g~-----~~~~~~~~~~~g~~l 377 (382)
+. + .+ ..||+++.... .+.+|.++. +|++.
T Consensus 259 i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~-~g~~~ 296 (365)
T 1jof_A 259 VCALTFSGKYMFASSRANKFELQGYIAGFKLRD-CGSIE 296 (365)
T ss_dssp EEEECTTSSEEEEEEEESSTTSCCEEEEEEECT-TSCEE
T ss_pred EEEECCCCCEEEEECCCCCCCCCCeEEEEEECC-CCCEE
Confidence 33 3 24 46787765443 566777764 56654
No 216
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.43 E-value=0.013 Score=59.88 Aligned_cols=145 Identities=17% Similarity=0.186 Sum_probs=70.0
Q ss_pred cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCC-cE
Q 040693 213 KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNG-NV 289 (382)
Q Consensus 213 ~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG-~~ 289 (382)
.+..++.+|.++|+......... .........+ ++..|++...+.. .....|+.+|+.+| +.
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~~~------------~~~~~v~~~d~~~g~~~ 297 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEP---KEKFLTNLSWSPDENILYVAEVNRA------------QNECKVNAYDAETGRFV 297 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSC---TTCEEEEEEECTTSSEEEEEEECTT------------SCEEEEEEEETTTCCEE
T ss_pred CeeEEEEEECCCCceEeeccCCC---CceeEeeEEEECCCCEEEEEEeCCC------------CCeeEEEEEECCCCcee
Confidence 34679999999998765543211 0111122222 5666766533211 12357999999999 43
Q ss_pred EeeecCCCC-CC-CCcceEE-e--CC-EEEEeeecCCC--cEEEEeCCCCcEeEEEecCCc-eecceEE--eCCEEEEEe
Q 040693 290 LWSTADPSN-GT-APGPVTV-A--NG-VLFGGSTYRQG--PIYAMDVKTGKILWSYDTGAT-IYGGASV--SNGCIYMGN 358 (382)
Q Consensus 290 ~W~~~~~~~-~~-~~~~~~~-~--~~-~v~~~~~~~~g--~l~~ld~~tG~ilw~~~~~~~-~~~~p~~--~~g~lyv~~ 358 (382)
.-....... .. ....+.+ . ++ .++.+. .++ .|+.+|.+ |+.+-++..+.. ....+.+ .+..||+++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~--~~g~~~l~~~~~~-~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~ 374 (706)
T 2z3z_A 298 RTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR--RDGWNHLYLYDTT-GRLIRQVTKGEWEVTNFAGFDPKGTRLYFES 374 (706)
T ss_dssp EEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC--TTSSCEEEEEETT-SCEEEECCCSSSCEEEEEEECTTSSEEEEEE
T ss_pred eEEEEccCCCeECccCCceeecCCCCEEEEEEc--cCCccEEEEEECC-CCEEEecCCCCeEEEeeeEEcCCCCEEEEEe
Confidence 322211110 00 0112223 2 44 444443 244 57777754 554444433221 2222333 345677766
Q ss_pred Ccee--EeecCCccCCCCC
Q 040693 359 GYKV--TVGFGNKNFTSGT 375 (382)
Q Consensus 359 ~~g~--~~~~~~~~~~~g~ 375 (382)
.... ...+|.++..+|+
T Consensus 375 ~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 375 TEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp SSSCTTCBEEEEEETTCCC
T ss_pred cCCCCceEEEEEEEcCCCC
Confidence 5533 2456666666654
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.43 E-value=0.033 Score=50.67 Aligned_cols=123 Identities=18% Similarity=0.182 Sum_probs=69.0
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEee
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWS 292 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~ 292 (382)
+.|+.+|+++|+..-..... ...+.+. ++..+|+...... ....+.|+.+|...+.+.-.
T Consensus 169 ~~v~~~d~~~g~~~~~~~~~-------~p~gl~~spdg~~lyv~~~~~~-----------~~~~~~i~~~~~~~~~l~~~ 230 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMADLD-------HPNGLAFSPDEQTLYVSQTPEQ-----------GHGSVEITAFAWRDGALHDR 230 (305)
T ss_dssp EEEEEECSSSCCCEEEEEES-------SEEEEEECTTSSEEEEEECCC--------------CCCEEEEEEEETTEEEEE
T ss_pred CeEEEEcCCCCcEEEEecCC-------CCcceEEcCCCCEEEEEecCCc-----------CCCCCEEEEEEecCCCccCC
Confidence 67999999888754322211 1112222 5567888632200 00125789999876542111
Q ss_pred ecC-CCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEeCc
Q 040693 293 TAD-PSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGNGY 360 (382)
Q Consensus 293 ~~~-~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~~~ 360 (382)
... .........+.++ ++.+|+++ .+.|+.+|+ +|+.+-++..+.. ..+.+. .+++||+++..
T Consensus 231 ~~~~~~~~~~pdgi~~d~~G~lwv~~---~~gv~~~~~-~g~~~~~~~~~~~-~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 231 RHFASVPDGLPDGFCVDRGGWLWSSS---GTGVCVFDS-DGQLLGHIPTPGT-ASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp EEEECCSSSCCCSEEECTTSCEEECC---SSEEEEECT-TSCEEEEEECSSC-CCEEEECTTSCEEEEEETT
T ss_pred eEEEECCCCCCCeEEECCCCCEEEec---CCcEEEECC-CCCEEEEEECCCc-eeEEEEeCCCCEEEEEcCC
Confidence 111 0001112234444 57789887 456999998 5999888887653 333444 45689998876
No 218
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.43 E-value=0.027 Score=53.58 Aligned_cols=116 Identities=7% Similarity=0.051 Sum_probs=63.8
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeee-ccCCCCC--CCCcccceee--eC-CeEEEEecCccccccccCCCCCCCCCce
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSM-EAGPGGL--GGGAMWGAAT--DE-RRIYTNIANSQHKNFNLKPSKNSTIAGG 278 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~-~~~~~~~--~g~~~~~~~~--~~-~~v~~~~~~~~~~~~~~~~~~~~~~~g~ 278 (382)
+..++++ .|+.+..+|..++...... ...+... .......... ++ ..++.+ ..++.
T Consensus 189 ~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-----------------~~dg~ 250 (447)
T 3dw8_B 189 YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYS-----------------SSKGT 250 (447)
T ss_dssp SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEE-----------------ETTSC
T ss_pred CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEE-----------------eCCCe
Confidence 3566666 7999999999855444432 1111000 0111222222 33 455554 34588
Q ss_pred EEEEECCCCcE----EeeecCCCCC----------CCCcceEEe-C-CEEEEeeecCCCcEEEEeCCC-CcEeEEEecCC
Q 040693 279 WVAMDASNGNV----LWSTADPSNG----------TAPGPVTVA-N-GVLFGGSTYRQGPIYAMDVKT-GKILWSYDTGA 341 (382)
Q Consensus 279 v~a~d~~tG~~----~W~~~~~~~~----------~~~~~~~~~-~-~~v~~~~~~~~g~l~~ld~~t-G~ilw~~~~~~ 341 (382)
|..+|.++++. .......... .....+.+. + .+++.++ .+.|..+|..+ ++.+..+....
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~---~~~v~iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD---YLSVKVWDLNMENRPVETYQVHE 327 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE---SSEEEEEETTCCSSCSCCEESCG
T ss_pred EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee---CCeEEEEeCCCCccccceeeccc
Confidence 99999999986 4444433210 011222232 3 4555444 49999999987 88877776543
No 219
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.42 E-value=0.011 Score=53.46 Aligned_cols=24 Identities=8% Similarity=-0.040 Sum_probs=18.2
Q ss_pred ecEEEEEccCcEEEEEeCCCCCee
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLI 228 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~ 228 (382)
...++++..++.+...+..+++..
T Consensus 182 ~~~l~~~~~~~~~~~~~~~~~~~~ 205 (351)
T 3f3f_A 182 PEKLAVSALEQAIIYQRGKDGKLH 205 (351)
T ss_dssp CCEEEEEETTEEEEEEECTTSCEE
T ss_pred CcEEEEecCCCcEEEEccCCCcee
Confidence 567788888888877787777763
No 220
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.41 E-value=0.0073 Score=56.52 Aligned_cols=97 Identities=5% Similarity=0.001 Sum_probs=52.4
Q ss_pred ceEEEEECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeee--------------cCCCcEEEEeCCCCcEeEEEecC
Q 040693 277 GGWVAMDASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGST--------------YRQGPIYAMDVKTGKILWSYDTG 340 (382)
Q Consensus 277 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~--------------~~~g~l~~ld~~tG~ilw~~~~~ 340 (382)
+.|+.+|+++|+..-....+. .. +... ++.+++.... .....|+.+|+++|++..-....
T Consensus 264 ~~l~~~d~~~g~~~~l~~~~~---~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 339 (396)
T 3c5m_A 264 RVIYKANPETLENEEVMVMPP---CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHS 339 (396)
T ss_dssp EEEEEECTTTCCEEEEEECCS---EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECC
T ss_pred ceEEEEECCCCCeEEeeeCCC---CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCC
Confidence 459999999998765444432 11 2222 3344444321 02468999999988754322222
Q ss_pred Cce----------ecceEE--eCCEEEEEeCceeEeecCCccCCCCCeE
Q 040693 341 ATI----------YGGASV--SNGCIYMGNGYKVTVGFGNKNFTSGTSL 377 (382)
Q Consensus 341 ~~~----------~~~p~~--~~g~lyv~~~~g~~~~~~~~~~~~g~~l 377 (382)
... ...+.. .+.+|++.+.......+|.++..+++..
T Consensus 340 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 340 TSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp CCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred CccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccc
Confidence 111 233443 3446766665434456777777666543
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.41 E-value=0.0061 Score=56.51 Aligned_cols=155 Identities=15% Similarity=0.161 Sum_probs=76.4
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
++.++++..++ |+.+|.++|+...-...... ..........+ .++.+|++...... ....+.|+.+|
T Consensus 100 dg~l~v~~~~g-l~~~d~~~g~~~~~~~~~~~-~~~~~~~~i~~d~~G~l~v~~~~~~~----------~~~~~~l~~~~ 167 (326)
T 2ghs_A 100 DSKQLIASDDG-LFLRDTATGVLTLHAELESD-LPGNRSNDGRMHPSGALWIGTMGRKA----------ETGAGSIYHVA 167 (326)
T ss_dssp TTEEEEEETTE-EEEEETTTCCEEEEECSSTT-CTTEEEEEEEECTTSCEEEEEEETTC----------CTTCEEEEEEE
T ss_pred CCeEEEEECCC-EEEEECCCCcEEEEeeCCCC-CCCCCCCCEEECCCCCEEEEeCCCcC----------CCCceEEEEEe
Confidence 34455555554 99999999986533322110 01111122222 35567776432100 01346799999
Q ss_pred CCCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCC--CC-cE----eEE-EecCCceecceEE-eCC
Q 040693 284 ASNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVK--TG-KI----LWS-YDTGATIYGGASV-SNG 352 (382)
Q Consensus 284 ~~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~--tG-~i----lw~-~~~~~~~~~~p~~-~~g 352 (382)
+|+..-...... ....+.+. +..+|+... ..+.|+.+|.+ +| ++ ++. +...........+ .+|
T Consensus 168 --~g~~~~~~~~~~---~~~~i~~s~dg~~lyv~~~-~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G 241 (326)
T 2ghs_A 168 --KGKVTKLFADIS---IPNSICFSPDGTTGYFVDT-KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG 241 (326)
T ss_dssp --TTEEEEEEEEES---SEEEEEECTTSCEEEEEET-TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS
T ss_pred --CCcEEEeeCCCc---ccCCeEEcCCCCEEEEEEC-CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC
Confidence 676543222111 11123332 346777653 46789999975 77 42 221 1111112222333 468
Q ss_pred EEEEEeCceeEeecCCccCCCCCeEEEE
Q 040693 353 CIYMGNGYKVTVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 353 ~lyv~~~~g~~~~~~~~~~~~g~~l~~~ 380 (382)
+||+++..+. +++.+++ +|+.+-.+
T Consensus 242 ~lwva~~~~~--~v~~~d~-~g~~~~~i 266 (326)
T 2ghs_A 242 HIWNARWGEG--AVDRYDT-DGNHIARY 266 (326)
T ss_dssp CEEEEEETTT--EEEEECT-TCCEEEEE
T ss_pred CEEEEEeCCC--EEEEECC-CCCEEEEE
Confidence 8999874322 2344565 56665544
No 222
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.36 E-value=0.11 Score=49.63 Aligned_cols=147 Identities=12% Similarity=0.024 Sum_probs=79.3
Q ss_pred cEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeee--CCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 206 DIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATD--ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
.+.++....+.+..+|.+.....-..... .....+.+++ ++.||++... ..+.|..++
T Consensus 172 ~lY~~d~~~~~I~~~~~~g~~~~~l~~~~-----~~~P~~iavdp~~g~ly~td~~---------------~~~~I~~~~ 231 (400)
T 3p5b_L 172 NIYWTDSVLGTVSVADTKGVKRKTLFREN-----GSKPRAIVVDPVHGFMYWTDWG---------------TPAKIKKGG 231 (400)
T ss_dssp EEEEEETTTTEEEEECTTTCSEEEEEECS-----SCCEEEEEEETTTTEEEEEECS---------------SSCCEEEEE
T ss_pred ceEEEECCCCeEEEEeCCCCceEEEEeCC-----CCCcceEEEecccCeEEEEeCC---------------CCCEEEEEe
Confidence 33344445667887877643322222211 1112334443 6888887432 125688888
Q ss_pred CCCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC---ceecceEEeCCEEEEEe
Q 040693 284 ASNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA---TIYGGASVSNGCIYMGN 358 (382)
Q Consensus 284 ~~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~---~~~~~p~~~~g~lyv~~ 358 (382)
.......-...... .....++++ ++++|++.. ..+.|..+|.+ |+.+..+-... ..-.+.++.+++||++.
T Consensus 232 ~dG~~~~~~~~~~l--~~P~glavd~~~~~lY~aD~-~~~~I~~~d~d-G~~~~~~~~~~~~l~~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 232 LNGVDIYSLVTENI--QWPNGITLDLLSGRLYWVDS-KLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 307 (400)
T ss_dssp TTSCSCEEEECSSC--SCEEEEEEETTTTEEEEEET-TTTEEEEEETT-SCCCEEEEECSSTTSSEEEEEEETTEEEEEE
T ss_pred CCCCccEEEEECCC--CceEEEEEEeCCCEEEEEEC-CCCEEEEEeCC-CCccEEEEeCCCCCCCCEEEEEeCCEEEEec
Confidence 75433222222111 123345555 689999875 56789999986 44444442221 12234456899999998
Q ss_pred CceeEeecCCccCCCCCeEE
Q 040693 359 GYKVTVGFGNKNFTSGTSLY 378 (382)
Q Consensus 359 ~~g~~~~~~~~~~~~g~~l~ 378 (382)
.... .++.++..+|+.+-
T Consensus 308 ~~~~--~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 308 IINE--AIFSANRLTGSDVN 325 (400)
T ss_dssp SSSC--SEEEEESSSCCCCE
T ss_pred CCCC--eEEEEEcCCCCceE
Confidence 6544 24556666676543
No 223
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.36 E-value=0.018 Score=58.94 Aligned_cols=19 Identities=32% Similarity=0.466 Sum_probs=14.4
Q ss_pred CcceEEEEECCCCcEEEEE
Q 040693 141 HSNSLLALDLDTGKIVWYK 159 (382)
Q Consensus 141 ~~g~v~ald~~tG~~~W~~ 159 (382)
....|+.+|.++|+.....
T Consensus 233 ~~~~l~~~d~~~~~~~~~~ 251 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQ 251 (706)
T ss_dssp CEEEEEEEETTTTEEEECC
T ss_pred CeeEEEEEECCCCceEeec
Confidence 3478999999998876543
No 224
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.34 E-value=0.017 Score=59.35 Aligned_cols=93 Identities=5% Similarity=-0.053 Sum_probs=49.2
Q ss_pred eEEEEECCC-CcEEeeecCCC-C-CCCCcceEEeCCEEEEeee---cCCCcEEEEeCCCCcEeEEEecCCc----eecce
Q 040693 278 GWVAMDASN-GNVLWSTADPS-N-GTAPGPVTVANGVLFGGST---YRQGPIYAMDVKTGKILWSYDTGAT----IYGGA 347 (382)
Q Consensus 278 ~v~a~d~~t-G~~~W~~~~~~-~-~~~~~~~~~~~~~v~~~~~---~~~g~l~~ld~~tG~ilw~~~~~~~----~~~~p 347 (382)
.|+.+|+.+ |+......... . ....... -++..+++... ..+..|+.+|.++|+..-....... ....+
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence 688999999 88765432211 0 0111122 34555555432 1245799999999987655443221 12344
Q ss_pred EE-eCCEEEEEeCceeEeecCCccC
Q 040693 348 SV-SNGCIYMGNGYKVTVGFGNKNF 371 (382)
Q Consensus 348 ~~-~~g~lyv~~~~g~~~~~~~~~~ 371 (382)
.. .+|++++.+.......+|.++.
T Consensus 343 ~~spdg~~~~~~~~~g~~~l~~~~~ 367 (741)
T 2ecf_A 343 RFLDDGSILWSSERTGFQHLYRIDS 367 (741)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECS
T ss_pred EECCCCeEEEEecCCCccEEEEEcC
Confidence 44 3555555544333345565554
No 225
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.34 E-value=0.031 Score=52.47 Aligned_cols=179 Identities=9% Similarity=-0.031 Sum_probs=94.8
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
++.|..+|..+++.+.+...... +.. +.+.++ +..+..+. ++.+..++
T Consensus 156 d~~i~iwd~~~~~~~~~~~~~~~-V~~---------------------------v~fspd---g~~l~s~s-~~~~~~~~ 203 (365)
T 4h5i_A 156 PAIMRIIDPSDLTEKFEIETRGE-VKD---------------------------LHFSTD---GKVVAYIT-GSSLEVIS 203 (365)
T ss_dssp SCEEEEEETTTTEEEEEEECSSC-CCE---------------------------EEECTT---SSEEEEEC-SSCEEEEE
T ss_pred CCEEEEeECCCCcEEEEeCCCCc-eEE---------------------------EEEccC---CceEEecc-ceeEEEEE
Confidence 58899999999999988753321 110 111222 24455554 55578888
Q ss_pred CCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEee--ecCCC
Q 040693 222 RDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWS--TADPS 297 (382)
Q Consensus 222 ~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~--~~~~~ 297 (382)
..+|+.+-....... ......... ++..+....... ...-.+..+|..+++..-. .....
T Consensus 204 ~~~~~~~~~~~~~~~---~~~v~~v~fspdg~~l~~~s~d~-------------~~~~~i~~~~~~~~~~~~~~~~~~~~ 267 (365)
T 4h5i_A 204 TVTGSCIARKTDFDK---NWSLSKINFIADDTVLIAASLKK-------------GKGIVLTKISIKSGNTSVLRSKQVTN 267 (365)
T ss_dssp TTTCCEEEEECCCCT---TEEEEEEEEEETTEEEEEEEESS-------------SCCEEEEEEEEETTEEEEEEEEEEES
T ss_pred eccCcceeeeecCCC---CCCEEEEEEcCCCCEEEEEecCC-------------cceeEEeecccccceecceeeeeecC
Confidence 888887655432210 111112221 333343332210 1112466667666643221 11111
Q ss_pred CCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC-ceecceEE-eCCEEEEEeCceeEeecCCcc
Q 040693 298 NGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA-TIYGGASV-SNGCIYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 298 ~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~-~~~~~p~~-~~g~lyv~~~~g~~~~~~~~~ 370 (382)
.......+.+ ++.++..++ .++.|..+|.++|+++.++..+. ....+... .+++++++.+....+.++.+-
T Consensus 268 ~~~~V~~~~~Spdg~~lasgs--~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 268 RFKGITSMDVDMKGELAVLAS--NDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp SCSCEEEEEECTTSCEEEEEE--TTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CCCCeEeEEECCCCCceEEEc--CCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 1011122223 345666666 48999999999999998874432 22233333 477777776666667787763
No 226
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.29 E-value=0.015 Score=52.66 Aligned_cols=102 Identities=9% Similarity=0.181 Sum_probs=57.1
Q ss_pred EEEEE-ccCcEEEEEeCC-CCCee----eeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceE
Q 040693 207 IVVAV-QKSGFAWALDRD-SGSLI----WSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGW 279 (382)
Q Consensus 207 ~v~~~-~~~g~l~ald~~-tG~~~----W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v 279 (382)
.+++. ..++.++.+|.+ +|+.. +. .... .......+.+. .++.+|++.. ..+.|
T Consensus 189 ~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~--~~~~~p~~i~~d~~G~l~v~~~----------------~~~~i 249 (314)
T 1pjx_A 189 QLIVAETPTKKLWSYDIKGPAKIENKKVWG-HIPG--THEGGADGMDFDEDNNLLVANW----------------GSSHI 249 (314)
T ss_dssp EEEEEETTTTEEEEEEEEETTEEEEEEEEE-ECCC--CSSCEEEEEEEBTTCCEEEEEE----------------TTTEE
T ss_pred EEEEEECCCCeEEEEECCCCCccccceEEE-ECCC--CCCCCCCceEECCCCCEEEEEc----------------CCCEE
Confidence 45554 556789999876 56532 21 1110 00011122233 3567887632 24679
Q ss_pred EEEECCCCcEEeeecCCCCCCCCcceEEe-C-CEEEEeeecCCCcEEEEeCCC
Q 040693 280 VAMDASNGNVLWSTADPSNGTAPGPVTVA-N-GVLFGGSTYRQGPIYAMDVKT 330 (382)
Q Consensus 280 ~a~d~~tG~~~W~~~~~~~~~~~~~~~~~-~-~~v~~~~~~~~g~l~~ld~~t 330 (382)
..+|+++|+.+.....+.. ....+.+. + ..+|+++. .++.|+.|+++.
T Consensus 250 ~~~d~~~g~~~~~~~~~~~--~~~~i~~~~dg~~l~v~~~-~~~~l~~~~~~~ 299 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIRCPFE--KPSNLHFKPQTKTIFVTEH-ENNAVWKFEWQR 299 (314)
T ss_dssp EEECTTCBSCSEEEECSSS--CEEEEEECTTSSEEEEEET-TTTEEEEEECSS
T ss_pred EEEcCCCCcEeEEEeCCCC--CceeEEECCCCCEEEEEeC-CCCeEEEEeCCC
Confidence 9999998988776665431 12233332 3 45888773 346899998763
No 227
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.28 E-value=0.0052 Score=63.93 Aligned_cols=147 Identities=11% Similarity=0.053 Sum_probs=74.6
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCC-CCCCCccccee-----------eeCCeEEEEecCccccccccCCCCC
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPG-GLGGGAMWGAA-----------TDERRIYTNIANSQHKNFNLKPSKN 272 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~-~~~g~~~~~~~-----------~~~~~v~~~~~~~~~~~~~~~~~~~ 272 (382)
+..+++++.++.+..+|..+++..-....... .......+.+. .++..++++
T Consensus 113 ~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg---------------- 176 (753)
T 3jro_A 113 GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG---------------- 176 (753)
T ss_dssp CSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEE----------------
T ss_pred CCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEE----------------
Confidence 46788889999999999988743322221110 00000111110 024455554
Q ss_pred CCCCceEEEEECCCCcEEeeecC--CCCCCCCcceEEe-----CCEEEEeeecCCCcEEEEeCCCCcEeEEEecC-----
Q 040693 273 STIAGGWVAMDASNGNVLWSTAD--PSNGTAPGPVTVA-----NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTG----- 340 (382)
Q Consensus 273 ~~~~g~v~a~d~~tG~~~W~~~~--~~~~~~~~~~~~~-----~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~----- 340 (382)
..++.|..+|.++++..++... .........+.+. +..++.++ .+|.|..+|..+++..+.....
T Consensus 177 -s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s--~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 253 (753)
T 3jro_A 177 -GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS--QDRTCIIWTQDNEQGPWKKTLLKEEKF 253 (753)
T ss_dssp -ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--SSSCEEEEEESSSSSCCBCCBSSSSCC
T ss_pred -ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe--cCCEEEEecCCCCCCcceeEEeccCCC
Confidence 3458899999998865444321 1100111122222 23455555 4899999999887543332221
Q ss_pred CceecceEE-eCCEEEE-EeCceeEeecCCccC
Q 040693 341 ATIYGGASV-SNGCIYM-GNGYKVTVGFGNKNF 371 (382)
Q Consensus 341 ~~~~~~p~~-~~g~lyv-~~~~g~~~~~~~~~~ 371 (382)
.....+... .+++.++ ++.+|. +.+|.++.
T Consensus 254 ~~~v~~l~~spdg~~l~s~s~Dg~-I~vwd~~~ 285 (753)
T 3jro_A 254 PDVLWRASWSLSGNVLALSGGDNK-VTLWKENL 285 (753)
T ss_dssp SSCCCCEEECTTTCCEEEECSSSC-EECCBCCS
T ss_pred CCceEEEEEcCCCCEEEEEcCCCE-EEEEecCC
Confidence 111222222 3444444 445544 67777663
No 228
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.26 E-value=0.11 Score=47.15 Aligned_cols=128 Identities=16% Similarity=0.155 Sum_probs=72.6
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
..++.+|..+. .|+.-.+.+ ........++.++.||+........ ......+..+|+++. .|+.-
T Consensus 124 ~~~~~~d~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~~---------~~~~~~~~~yd~~~~--~W~~~ 188 (302)
T 2xn4_A 124 SSVEAYNIKSN--EWFHVAPMN--TRRSSVGVGVVGGLLYAVGGYDVAS---------RQCLSTVECYNATTN--EWTYI 188 (302)
T ss_dssp EEEEEEETTTT--EEEEECCCS--SCCBSCEEEEETTEEEEECCEETTT---------TEECCCEEEEETTTT--EEEEE
T ss_pred ceEEEEeCCCC--eEeecCCCC--CcccCceEEEECCEEEEEeCCCCCC---------CccccEEEEEeCCCC--cEEEC
Confidence 35889998865 577653322 1222333444678888864321100 011356999999877 46653
Q ss_pred --CCCCCCCCcceEEeCCEEEEeeecC----CCcEEEEeCCCCcEeEEEec--CCc-eecceEEeCCEEEEEeCc
Q 040693 295 --DPSNGTAPGPVTVANGVLFGGSTYR----QGPIYAMDVKTGKILWSYDT--GAT-IYGGASVSNGCIYMGNGY 360 (382)
Q Consensus 295 --~~~~~~~~~~~~~~~~~v~~~~~~~----~g~l~~ld~~tG~ilw~~~~--~~~-~~~~p~~~~g~lyv~~~~ 360 (382)
.+... ......+.++.+|+..... ...++.+|+++. .|+.-. +.. ...+.++.+++||+..+.
T Consensus 189 ~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~ 260 (302)
T 2xn4_A 189 AEMSTRR-SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTN--AWRQVADMNMCRRNAGVCAVNGLLYVVGGD 260 (302)
T ss_dssp CCCSSCC-BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CCCcccc-ccccEEEECCEEEEECCCCCCcccceEEEEeCCCC--CEeeCCCCCCccccCeEEEECCEEEEECCc
Confidence 33322 2334445577777754211 246999999876 465432 222 334456689999998764
No 229
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.25 E-value=0.049 Score=56.00 Aligned_cols=145 Identities=13% Similarity=0.078 Sum_probs=76.5
Q ss_pred CcEEEEEeCCC------CCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCC
Q 040693 214 SGFAWALDRDS------GSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNG 287 (382)
Q Consensus 214 ~g~l~ald~~t------G~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG 287 (382)
+..++.+|..+ |+..+..-.... . ........+++.+|+..... .....|+.+|+.++
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~--~-~~~~~~s~dg~~l~~~s~~~-------------~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNF--E-GEYDYVTNEGTVFTFKTNRH-------------SPNYRLINIDFTDP 321 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSS--S-SCEEEEEEETTEEEEEECTT-------------CTTCEEEEEETTSC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCC--C-cEEEEEeccCCEEEEEECCC-------------CCCCEEEEEeCCCC
Confidence 56899999887 643232211110 0 11111222677777764321 12467999999988
Q ss_pred cE-EeeecCCCCC-CCCcceEEe-CCEEEEeeecCCC--cEEEEeCCCCcEeEEEecCCceecceEE--eCCEEEEEe-C
Q 040693 288 NV-LWSTADPSNG-TAPGPVTVA-NGVLFGGSTYRQG--PIYAMDVKTGKILWSYDTGATIYGGASV--SNGCIYMGN-G 359 (382)
Q Consensus 288 ~~-~W~~~~~~~~-~~~~~~~~~-~~~v~~~~~~~~g--~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~~g~lyv~~-~ 359 (382)
+. .|+.-.+... .....+... ++.+++... .++ +|+.+|.++|+.+.++..+.+....... .+..+++.. +
T Consensus 322 ~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~-~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss 400 (710)
T 2xdw_A 322 EESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL-HDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTS 400 (710)
T ss_dssp CGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE-ETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEEC
T ss_pred CcccceeccCCCCCCeEEEEEEEcCCEEEEEEE-ECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeC
Confidence 63 5665433311 011122233 555554432 244 6899999889987777665433333322 334666553 3
Q ss_pred ceeEeecCCccCCCCC
Q 040693 360 YKVTVGFGNKNFTSGT 375 (382)
Q Consensus 360 ~g~~~~~~~~~~~~g~ 375 (382)
...-..+|.+|..+|+
T Consensus 401 ~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 401 FLSPGIIYHCDLTKEE 416 (710)
T ss_dssp SSCCCEEEEEETTSSS
T ss_pred CCCCCEEEEEECCCCc
Confidence 3222345666777776
No 230
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.22 E-value=0.086 Score=49.01 Aligned_cols=124 Identities=10% Similarity=0.012 Sum_probs=59.1
Q ss_pred cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee---eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcE
Q 040693 213 KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT---DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNV 289 (382)
Q Consensus 213 ~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~ 289 (382)
.+..|+.+|.++|+......... ....+.. ++..+++...... ......|+.+|+.+++.
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~------~~~~~~~sp~dg~~l~~~~~~~~-----------~~~~~~l~~~d~~~~~~ 228 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTA------WLGHPIYRPFDDSTVGFCHEGPH-----------DLVDARMWLVNEDGSNV 228 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESS------CEEEEEEETTEEEEEEEEECSCS-----------SSCSCCCEEEETTSCCC
T ss_pred CcceEEEEECCCCcEEeeccCCc------ccccceECCCCCCEEEEEecCCC-----------CCCCceEEEEECCCCce
Confidence 45679999999988765443211 1112222 3343444321100 01125688999887764
Q ss_pred EeeecCCCCCCCCcceEE--eCCE-EEEeeecCC--CcEEEEeCCCCcEeEEEecCCceecceEE-e-CCEEEEE
Q 040693 290 LWSTADPSNGTAPGPVTV--ANGV-LFGGSTYRQ--GPIYAMDVKTGKILWSYDTGATIYGGASV-S-NGCIYMG 357 (382)
Q Consensus 290 ~W~~~~~~~~~~~~~~~~--~~~~-v~~~~~~~~--g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~-~g~lyv~ 357 (382)
.-... .........+.+ ++.. +|....... +.|+.+|+++|++.--...+. . . +.. . ++++++.
T Consensus 229 ~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~-~-~~~s~~dg~~l~~ 299 (396)
T 3c5m_A 229 RKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-C-S-HLMSNFDGSLMVG 299 (396)
T ss_dssp EESSC-CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-E-E-EEEECSSSSEEEE
T ss_pred eEeec-cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-C-C-CCccCCCCceEEE
Confidence 32222 110001111223 2343 444332112 349999999998654433332 2 2 433 3 6666654
No 231
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.20 E-value=0.04 Score=50.35 Aligned_cols=146 Identities=12% Similarity=0.041 Sum_probs=73.0
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeee
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWST 293 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~ 293 (382)
+.|+.+|.++++..-...... .+.......+ .++.+|++..... .....+.|+.+|+++++..-..
T Consensus 112 ~~i~~~d~~~~~~~~~~~~~~---~~~~~~~i~~d~~g~l~v~~~~~~----------~~~~~~~l~~~~~~~~~~~~~~ 178 (333)
T 2dg1_A 112 GGIFAATENGDNLQDIIEDLS---TAYCIDDMVFDSKGGFYFTDFRGY----------STNPLGGVYYVSPDFRTVTPII 178 (333)
T ss_dssp CEEEEECTTSCSCEEEECSSS---SCCCEEEEEECTTSCEEEEECCCB----------TTBCCEEEEEECTTSCCEEEEE
T ss_pred ceEEEEeCCCCEEEEEEccCc---cCCcccceEECCCCCEEEEecccc----------ccCCCceEEEEeCCCCEEEEee
Confidence 579999999887642222111 1112222233 3567777643210 0012467999998887654322
Q ss_pred cCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCC-CcEeEEE------ecCC-ceecceEE-eCCEEEEEeCcee
Q 040693 294 ADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKT-GKILWSY------DTGA-TIYGGASV-SNGCIYMGNGYKV 362 (382)
Q Consensus 294 ~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~t-G~ilw~~------~~~~-~~~~~p~~-~~g~lyv~~~~g~ 362 (382)
.... ....+.+. +..+|++.. .++.|+.+|.++ |+.+..+ .... .......+ .+|++|+++....
T Consensus 179 ~~~~---~~~~i~~~~dg~~l~v~~~-~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~ 254 (333)
T 2dg1_A 179 QNIS---VANGIALSTDEKVLWVTET-TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG 254 (333)
T ss_dssp EEES---SEEEEEECTTSSEEEEEEG-GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTT
T ss_pred cCCC---cccceEECCCCCEEEEEeC-CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCC
Confidence 2111 11223332 346777653 367899999863 5544332 1111 11222333 3688999874322
Q ss_pred EeecCCccCCCCCeEEEE
Q 040693 363 TVGFGNKNFTSGTSLYAF 380 (382)
Q Consensus 363 ~~~~~~~~~~~g~~l~~~ 380 (382)
. ++.++. +|+.+..|
T Consensus 255 ~--v~~~d~-~g~~~~~~ 269 (333)
T 2dg1_A 255 R--VLVFNK-RGYPIGQI 269 (333)
T ss_dssp E--EEEECT-TSCEEEEE
T ss_pred E--EEEECC-CCCEEEEE
Confidence 1 233455 46665554
No 232
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.18 E-value=0.11 Score=47.83 Aligned_cols=102 Identities=9% Similarity=-0.053 Sum_probs=55.7
Q ss_pred cEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 206 DIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
..++.+..|+.+..+| .+++.+..+..-. ........ ++..+..+ ..++.|..+|
T Consensus 185 ~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~-----~~v~~~~~s~~g~~l~sg-----------------s~dg~v~iwd 241 (343)
T 2xzm_R 185 PYFASVGWDGRLKVWN-TNFQIRYTFKAHE-----SNVNHLSISPNGKYIATG-----------------GKDKKLLIWD 241 (343)
T ss_dssp CEEEEEETTSEEEEEE-TTTEEEEEEECCS-----SCEEEEEECTTSSEEEEE-----------------ETTCEEEEEE
T ss_pred CEEEEEcCCCEEEEEc-CCCceeEEEcCcc-----ccceEEEECCCCCEEEEE-----------------cCCCeEEEEE
Confidence 5677888899999999 4466655554221 11222222 44555554 3458899999
Q ss_pred CC-CCcEEeeecCCCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeE
Q 040693 284 AS-NGNVLWSTADPSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILW 335 (382)
Q Consensus 284 ~~-tG~~~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw 335 (382)
+. .++..-...... ....+.+. ++.+++... ++.+..+|..+++.+-
T Consensus 242 ~~~~~~~~~~~~~~~---~v~~v~~sp~~~~la~~~--d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 242 ILNLTYPQREFDAGS---TINQIAFNPKLQWVAVGT--DQGVKIFNLMTQSKAP 290 (343)
T ss_dssp SSCCSSCSEEEECSS---CEEEEEECSSSCEEEEEE--SSCEEEEESSSCCSCS
T ss_pred CCCCcccceeecCCC---cEEEEEECCCCCEEEEEC--CCCEEEEEeCCCCCCc
Confidence 84 343333332221 11222232 333333333 7789999988876544
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.17 E-value=0.019 Score=57.58 Aligned_cols=92 Identities=9% Similarity=0.041 Sum_probs=55.1
Q ss_pred CcCCCCceeeeeecCcCccceeeeceE--EEcCEEEEeccCc-----cccccccccccccceEEEEeCccCceeeeeecc
Q 040693 2 VKRSNGKLVWKTKLDDHARSFITMSGT--YYKGAYYVGTSSI-----EEGLTFELCCTFQGSLAKLDAKTGRILWQTFML 74 (382)
Q Consensus 2 ld~~tGk~~W~~~~~~~~~~~~~~~p~--v~~~~v~v~~~~~-----~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~ 74 (382)
||+++.|.....+++... .....++. -..++||++.... +....+. +=.+++.+.++|.+|.+++|+..+.
T Consensus 117 Idl~t~~~~~ii~ip~g~-~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~-~~~~~~~vtvID~~t~~v~~qI~Vg 194 (595)
T 1fwx_A 117 VRCDVMKCDAILEIPNAK-GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED-VANYVNVFTAVDADKWEVAWQVLVS 194 (595)
T ss_dssp EETTTTEEEEEEECSSCC-SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC-GGGEEEEEEEEETTTTEEEEEEEES
T ss_pred EECCCceEeeEEeCCCCC-CCcceeeeecCCCcEEEEecccccccCCCCccccc-ccccCceEEEEECCCCeEEEEEEeC
Confidence 678888877755543211 11111221 2457888875221 1111111 1125789999999999999999985
Q ss_pred CCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCC
Q 040693 75 PDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGN 109 (382)
Q Consensus 75 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~ 109 (382)
.... ...+++++.++|+...+
T Consensus 195 g~pd--------------~~~~spdGk~~~vt~~~ 215 (595)
T 1fwx_A 195 GNLD--------------NCDADYEGKWAFSTSYN 215 (595)
T ss_dssp SCCC--------------CEEECSSSSEEEEEESC
T ss_pred CCcc--------------ceEECCCCCEEEEEecC
Confidence 3211 25677788899998865
No 234
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.17 E-value=0.053 Score=51.99 Aligned_cols=149 Identities=13% Similarity=0.211 Sum_probs=80.5
Q ss_pred ecEEEEEccCc--EEEEEeCCCCCeeeee-ccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceE
Q 040693 205 HDIVVAVQKSG--FAWALDRDSGSLIWSM-EAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGW 279 (382)
Q Consensus 205 ~~~v~~~~~~g--~l~ald~~tG~~~W~~-~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v 279 (382)
+..|++...++ .++.+|..++...-.. ..... ........++ +++.||+. ...+.|
T Consensus 182 g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~--~~~~p~~iav~p~~g~lyv~-----------------d~~~~I 242 (409)
T 3hrp_A 182 KQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGST--FSGKIGAVALDETEEWLYFV-----------------DSNKNF 242 (409)
T ss_dssp SSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTT--SCSCCCBCEECTTSSEEEEE-----------------CTTCEE
T ss_pred CCcEEEEecCCCceEEEEEcCCCceeEEeeeccch--hcCCcEEEEEeCCCCeEEEE-----------------ECCCcE
Confidence 35677776654 8999999877653332 11110 1112233333 36889985 335789
Q ss_pred EEEECCCCcEEeeec--CCCCCCCC-c-ceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEEecC-C-c---------
Q 040693 280 VAMDASNGNVLWSTA--DPSNGTAP-G-PVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTG-A-T--------- 342 (382)
Q Consensus 280 ~a~d~~tG~~~W~~~--~~~~~~~~-~-~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~-~-~--------- 342 (382)
+.+|+.+++...... ........ . -+.++ ++.+|++.. ..+.|+.+|.+ |++....-.. . +
T Consensus 243 ~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~-~~~~I~~~~~~-g~~~~~~g~~~~~g~~dg~~~~~ 320 (409)
T 3hrp_A 243 GRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ-NLSSVYKITPD-GECEWFCGSATQKTVQDGLREEA 320 (409)
T ss_dssp EEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET-TTTEEEEECTT-CCEEEEEECTTCCSCBCEEGGGC
T ss_pred EEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC-CCCEEEEEecC-CCEEEEEeCCCCCCcCCCccccc
Confidence 999999887544311 11111112 1 34454 578998874 57889999976 5533222211 0 0
Q ss_pred eecce---EE-eCCEEEEEeC-ceeEeecCCccCCCCCe
Q 040693 343 IYGGA---SV-SNGCIYMGNG-YKVTVGFGNKNFTSGTS 376 (382)
Q Consensus 343 ~~~~p---~~-~~g~lyv~~~-~g~~~~~~~~~~~~g~~ 376 (382)
.+..| ++ .+|+||++.. ....+ ..++..+|++
T Consensus 321 ~~~~P~gia~d~dG~lyvad~~~~~~I--~~~~~~~G~v 357 (409)
T 3hrp_A 321 LFAQPNGMTVDEDGNFYIVDGFKGYCL--RKLDILDGYV 357 (409)
T ss_dssp BCSSEEEEEECTTCCEEEEETTTTCEE--EEEETTTTEE
T ss_pred EeCCCeEEEEeCCCCEEEEeCCCCCEE--EEEECCCCEE
Confidence 01122 23 3678999987 44432 3345445553
No 235
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.16 E-value=0.093 Score=53.55 Aligned_cols=97 Identities=16% Similarity=0.050 Sum_probs=46.7
Q ss_pred CceEEEEECCCCcEEeeecCCC-CCCC---CcceEE-eCCEEEEe-eecCCC------cEEEEe-CCCCcE--eEEEecC
Q 040693 276 AGGWVAMDASNGNVLWSTADPS-NGTA---PGPVTV-ANGVLFGG-STYRQG------PIYAMD-VKTGKI--LWSYDTG 340 (382)
Q Consensus 276 ~g~v~a~d~~tG~~~W~~~~~~-~~~~---~~~~~~-~~~~v~~~-~~~~~g------~l~~ld-~~tG~i--lw~~~~~ 340 (382)
...|+.+|+++|+..-...... .... ..+... ++..+++. +. .++ .|+.+| .++++. .-+...+
T Consensus 279 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~ 357 (723)
T 1xfd_A 279 VSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAI-PQGGRGKFYHITVSSSQPNSSNDNIQSITSG 357 (723)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEE-CCSSSSCEEEEEEECSSCCSSSCCCCBSCCS
T ss_pred eEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEec-ccCCCcceeEEEEEeccCCCCccceeEeecC
Confidence 3568999999998765443211 1111 122222 33434433 32 355 689999 555551 2122111
Q ss_pred C-ceecceEE--eCCEEEEEeCce--eEeecCCccCCC
Q 040693 341 A-TIYGGASV--SNGCIYMGNGYK--VTVGFGNKNFTS 373 (382)
Q Consensus 341 ~-~~~~~p~~--~~g~lyv~~~~g--~~~~~~~~~~~~ 373 (382)
. .....+.. .+..||+.+..+ ....+|.++..+
T Consensus 358 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 358 DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVG 395 (723)
T ss_dssp SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSST
T ss_pred CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCC
Confidence 1 12222333 355676665543 335566665543
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.15 E-value=0.12 Score=50.20 Aligned_cols=151 Identities=10% Similarity=-0.095 Sum_probs=78.5
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCC-----CCCceEEEEECCCCcE
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNS-----TIAGGWVAMDASNGNV 289 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~g~v~a~d~~tG~~ 289 (382)
+.+..+|.+|++++=+.+.+.....-.......-+.+.+|++.... +-....+... ....+|+.+|..++++
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~---p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~ 240 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAV---PNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR 240 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCC---HHHHTTCCCTTTHHHHSCCEEEEEETTTTEE
T ss_pred CeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcC---ccccccccchhhhhhccCCEEEEEECCCCcE
Confidence 6899999999999877664421110011111111566666652110 0000000000 2357899999999999
Q ss_pred EeeecCCCCCCCCcce--EE----eCCEEEEeee----cCCCcEEEEeCCCCcEeEEEe--cCC----------------
Q 040693 290 LWSTADPSNGTAPGPV--TV----ANGVLFGGST----YRQGPIYAMDVKTGKILWSYD--TGA---------------- 341 (382)
Q Consensus 290 ~W~~~~~~~~~~~~~~--~~----~~~~v~~~~~----~~~g~l~~ld~~tG~ilw~~~--~~~---------------- 341 (382)
+-+++.+.. ...|. .+ ++..+|+... ..++.|+.+..+.|+..-... ++.
T Consensus 241 ~~tI~vg~~--g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~ 318 (462)
T 2ece_A 241 IHSLTLGEE--NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKA 318 (462)
T ss_dssp EEEEESCTT--EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTE
T ss_pred eeEEecCCC--CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccccccc
Confidence 888887531 12222 11 2457777652 025677766555443211111 111
Q ss_pred --ceecceEE--eCCEEEEEeCceeEeecCCcc
Q 040693 342 --TIYGGASV--SNGCIYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 342 --~~~~~p~~--~~g~lyv~~~~g~~~~~~~~~ 370 (382)
...+...+ .+..|||++.....+.+|.++
T Consensus 319 ~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 319 VPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp ECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred CCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 11111222 567899998876667777764
No 237
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.13 E-value=0.17 Score=47.01 Aligned_cols=147 Identities=14% Similarity=0.141 Sum_probs=74.7
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
..+..+|..+. .|+.-.+.+ .......+.++.++.||+..+.... ......++.+|...-+..|+.-
T Consensus 168 ~~v~~yd~~~~--~W~~~~~~p-~~~~~~~~~~~~~~~iyv~GG~~~~----------~~~~~~v~~~d~d~~~~~W~~~ 234 (357)
T 2uvk_A 168 KFLLSFDPSTQ--QWSYAGESP-WYGTAGAAVVNKGDKTWLINGEAKP----------GLRTDAVFELDFTGNNLKWNKL 234 (357)
T ss_dssp CEEEEEETTTT--EEEEEEECS-SCCCBSCEEEEETTEEEEECCEEET----------TEECCCEEEEECC---CEEEEC
T ss_pred ccEEEEeCCCC--cEEECCCCC-CCCcccccEEEECCEEEEEeeecCC----------CcccCceEEEEecCCCCcEEec
Confidence 47999999865 677653221 1111113344467888876432110 0123568889885556679864
Q ss_pred CCC--CC-CCCcceEEeCCEEEEeeec-CC--------------------CcEEEEeCCCCcEeEEE--ecCCc-eecce
Q 040693 295 DPS--NG-TAPGPVTVANGVLFGGSTY-RQ--------------------GPIYAMDVKTGKILWSY--DTGAT-IYGGA 347 (382)
Q Consensus 295 ~~~--~~-~~~~~~~~~~~~v~~~~~~-~~--------------------g~l~~ld~~tG~ilw~~--~~~~~-~~~~p 347 (382)
... +. .......+.++.+|+.... .. ..++++|+++. .|+. +++.+ ...+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~ 312 (357)
T 2uvk_A 235 APVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG--KWDKSGELSQGRAYGVS 312 (357)
T ss_dssp CCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEE
T ss_pred CCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC--ceeeCCCCCCCccccee
Confidence 322 11 1122345567777765420 01 25789998855 4654 23332 23445
Q ss_pred EEeCCEEEEEeCcee----EeecCCccCCCCCe
Q 040693 348 SVSNGCIYMGNGYKV----TVGFGNKNFTSGTS 376 (382)
Q Consensus 348 ~~~~g~lyv~~~~g~----~~~~~~~~~~~g~~ 376 (382)
++.+++|||..+... .-.++.++.++++.
T Consensus 313 ~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 313 LPWNNSLLIIGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp EEETTEEEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence 668999999866321 23344444444544
No 238
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.11 E-value=0.049 Score=51.76 Aligned_cols=110 Identities=12% Similarity=-0.012 Sum_probs=65.7
Q ss_pred cEEEEEccCcEEEEEeCCCCCe----eeeeccCCCCCCC-------Ccccceee--eCCeEEEEecCccccccccCCCCC
Q 040693 206 DIVVAVQKSGFAWALDRDSGSL----IWSMEAGPGGLGG-------GAMWGAAT--DERRIYTNIANSQHKNFNLKPSKN 272 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~----~W~~~~~~~~~~g-------~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~ 272 (382)
..++++..++.+..+|..+++. +..+......... ........ ++..++.+
T Consensus 240 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~---------------- 303 (447)
T 3dw8_B 240 NTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR---------------- 303 (447)
T ss_dssp TEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEE----------------
T ss_pred cEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEe----------------
Confidence 6888999999999999999986 4444432110000 01111222 34444443
Q ss_pred CCCCceEEEEECCC-CcEEeeecCCCCCCC-------------CcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeE
Q 040693 273 STIAGGWVAMDASN-GNVLWSTADPSNGTA-------------PGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILW 335 (382)
Q Consensus 273 ~~~~g~v~a~d~~t-G~~~W~~~~~~~~~~-------------~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw 335 (382)
.. +.|..+|.++ ++.+-+......... ...+.+ ++.+++.++ .++.|+.+|.++++.+.
T Consensus 304 -~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s--~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 304 -DY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS--YNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp -ES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC--STTEEEEEETTTCCEEE
T ss_pred -eC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEec--cCCEEEEEEcCCCccee
Confidence 33 7899999997 877666654321100 001333 245666666 49999999999998863
No 239
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.10 E-value=0.064 Score=55.59 Aligned_cols=154 Identities=12% Similarity=0.126 Sum_probs=80.2
Q ss_pred EEEeeeCceeecEEEEEccCcEEEEEeCCCC-----C-ee--eeeccCCCCCCCCcccceee-eCCeEEE--EecCcccc
Q 040693 195 MLSMYRNKVKHDIVVAVQKSGFAWALDRDSG-----S-LI--WSMEAGPGGLGGGAMWGAAT-DERRIYT--NIANSQHK 263 (382)
Q Consensus 195 ~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG-----~-~~--W~~~~~~~~~~g~~~~~~~~-~~~~v~~--~~~~~~~~ 263 (382)
+..+..+. ++.|++++..+-|+.+|..+. + .. ..+.... ............ .++.+++ +
T Consensus 421 v~~i~~d~--~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~i~~i~~d~~g~lWi~~~------- 490 (758)
T 3ott_A 421 TYYIFEDT--AGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHN-GLSGMFINQIIPDNEGNVWVLLY------- 490 (758)
T ss_dssp EEEEEECT--TSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGG-TCSCSCEEEEEECTTSCEEEEET-------
T ss_pred EEEEEEcC--CCCEEEEECCCceEEEccccccccCCcceeccccccccc-ccccceeeeEEEcCCCCEEEEcc-------
Confidence 34443333 578999987656999997631 1 11 1221110 011111222222 3466776 3
Q ss_pred ccccCCCCCCCCCceEEEEECCCCcEEeeecCCCC-CCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEE-E-ec
Q 040693 264 NFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSN-GTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWS-Y-DT 339 (382)
Q Consensus 264 ~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~-~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~-~-~~ 339 (382)
+ .+.|..+|+++++..--...... ......+..+ ++.+|+++ .+.|+.+|+++++...- . .+
T Consensus 491 ----------t-~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt---~~Gl~~~~~~~~~~~~~~~~gl 556 (758)
T 3ott_A 491 ----------N-NKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF---HGGVMRINPKDESQQSISFGSF 556 (758)
T ss_dssp ----------T-CSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE---TTEEEEECC--CCCCBCCCCC-
T ss_pred ----------C-CCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe---cCceEEEecCCCceEEecccCC
Confidence 2 24599999998876532211110 0111223333 57899988 46799999987765321 0 11
Q ss_pred CCceecceEEeCCEEEEEeCceeEeecCCccCCCCCe
Q 040693 340 GATIYGGASVSNGCIYMGNGYKVTVGFGNKNFTSGTS 376 (382)
Q Consensus 340 ~~~~~~~p~~~~g~lyv~~~~g~~~~~~~~~~~~g~~ 376 (382)
+.....+.+..+|+|++++..|- +.+++.+.+.
T Consensus 557 ~~~~i~~i~~~~g~lWi~t~~Gl----~~~~~~~~~~ 589 (758)
T 3ott_A 557 SNNEILSMTCVKNSIWVSTTNGL----WIIDRKTMDA 589 (758)
T ss_dssp --CCEEEEEEETTEEEEEESSCE----EEEETTTCCE
T ss_pred CccceEEEEECCCCEEEECCCCe----EEEcCCCcee
Confidence 22223344457899999997754 5566666543
No 240
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.06 E-value=0.049 Score=57.91 Aligned_cols=143 Identities=10% Similarity=-0.005 Sum_probs=83.4
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
++.|...|..+|+.+-.+..... +. -+.+..+ +..++++..+|.+..+|
T Consensus 78 D~~v~lWd~~~~~~~~~~~~~~~-V~---------------------------~v~~sp~---g~~l~sgs~dg~V~lwd 126 (902)
T 2oaj_A 78 KDTVYVLSLYSQKVLTTVFVPGK-IT---------------------------SIDTDAS---LDWMLIGLQNGSMIVYD 126 (902)
T ss_dssp TCEEEEEETTTCSEEEEEECSSC-EE---------------------------EEECCTT---CSEEEEEETTSCEEEEE
T ss_pred cCeEEEEECCCCcEEEEEcCCCC-EE---------------------------EEEECCC---CCEEEEEcCCCcEEEEE
Confidence 38999999999999877752211 11 1111112 46788899999999999
Q ss_pred CCCCCee-------eeeccCCCCCCCCcccceee---eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 222 RDSGSLI-------WSMEAGPGGLGGGAMWGAAT---DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 222 ~~tG~~~-------W~~~~~~~~~~g~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
..+++.. |....... ........... +.+.+.++ ..++.+ .+|.++++.+-
T Consensus 127 ~~~~~~~~~~i~~~~~~~~~~~-~h~~~V~sl~~sp~~~~~l~~g-----------------~~dg~v-lWd~~~~~~~~ 187 (902)
T 2oaj_A 127 IDRDQLSSFKLDNLQKSSFFPA-ARLSPIVSIQWNPRDIGTVLIS-----------------YEYVTL-TYSLVENEIKQ 187 (902)
T ss_dssp TTTTEEEEEEECCHHHHHTCSS-SCCCCCCEEEEETTEEEEEEEE-----------------CSSCEE-EEETTTTEEEE
T ss_pred CCCCccccceeccccccccccc-cCCCCeEEEEEccCCCCEEEEE-----------------eCCCcE-EEECCCCceEE
Confidence 9998764 11100000 01112222222 22345544 345788 99999998876
Q ss_pred eecCCCC---C-------------CCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEE
Q 040693 292 STADPSN---G-------------TAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWS 336 (382)
Q Consensus 292 ~~~~~~~---~-------------~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~ 336 (382)
+...... . .....+.+ ++.++..++ .++.|...|.++|+.+-.
T Consensus 188 ~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs--~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 188 SFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH--EDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp EECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE--TTCCEEEEETTTCCEEEE
T ss_pred EEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE--CCCeEEEEECCCCcEEEE
Confidence 6653300 0 00112222 234555555 599999999999998754
No 241
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.06 E-value=0.19 Score=52.55 Aligned_cols=145 Identities=12% Similarity=0.026 Sum_probs=79.3
Q ss_pred cEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 206 DIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
.+.++....+.|..++.+ |+.+-..-... .....+.++ ..+.||++... ..+.|..++
T Consensus 484 ~LY~tD~~~~~I~v~~ld-G~~~~~l~~~~----l~~P~gIaVDp~~g~LYwtD~g---------------~~~~I~~~~ 543 (791)
T 3m0c_C 484 NIYWTDSVLGTVSVADTK-GVKRKTLFREN----GSKPRAIVVDPVHGFMYWTDWG---------------TPAKIKKGG 543 (791)
T ss_dssp EEEEEETTTTEEEEEETT-SSSEEEEEECT----TCCEEEEEEETTTTEEEEEECS---------------SSCEEEEEE
T ss_pred cEEEEecCCCeEEEEeCC-CCeEEEEEeCC----CCCcceEEEecCCCCEEEecCC---------------CCCeEEEEe
Confidence 344444556788888876 44332221110 112234445 36889987432 125688888
Q ss_pred CCCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCcee---cceEEeCCEEEEEe
Q 040693 284 ASNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIY---GGASVSNGCIYMGN 358 (382)
Q Consensus 284 ~~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~---~~p~~~~g~lyv~~ 358 (382)
.......-...... .....++++ +++||++.. ..+.|..+|++ |+.+..+-.....+ .+..+.+++||++.
T Consensus 544 ~dG~~~~~lv~~~l--~~P~GLavD~~~~~LYwaD~-~~~~I~~~d~d-G~~~~~v~~~~~~l~~P~glav~~~~lYwtD 619 (791)
T 3m0c_C 544 LNGVDIYSLVTENI--QWPNGITLDLLSGRLYWVDS-KLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 619 (791)
T ss_dssp TTSCCEEEEECSSC--SCEEEEEEETTTTEEEEEET-TTTEEEEEETT-SCSCEEEEECTTTTSSEEEEEEETTEEEEEE
T ss_pred cCCCceEEEEeCCC--CCceEEEEecCCCeEEEEeC-CCCcEEEEecC-CCceEEEecCCCccCCCCEEEEeCCEEEEEE
Confidence 75443322222211 123345555 689999874 56789999986 55444443221112 24456899999998
Q ss_pred CceeEeecCCccCCCCCe
Q 040693 359 GYKVTVGFGNKNFTSGTS 376 (382)
Q Consensus 359 ~~g~~~~~~~~~~~~g~~ 376 (382)
..... ++.++..+|+.
T Consensus 620 ~~~~~--I~~~dk~tG~~ 635 (791)
T 3m0c_C 620 IINEA--IFSANRLTGSD 635 (791)
T ss_dssp TTTTE--EEEEETTTCCC
T ss_pred CCCCE--EEEEeCCCCcc
Confidence 75442 34455555643
No 242
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.04 E-value=0.061 Score=51.47 Aligned_cols=146 Identities=10% Similarity=0.025 Sum_probs=78.9
Q ss_pred cEEEEEccCcEEEEEeCCCCCee-eeeccCCCC-CCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEE
Q 040693 206 DIVVAVQKSGFAWALDRDSGSLI-WSMEAGPGG-LGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVA 281 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~~-W~~~~~~~~-~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a 281 (382)
..++++..+|.+..+|..+++.. +........ ........... +++.++++. ..++.|..
T Consensus 195 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~----------------~~dg~i~i 258 (430)
T 2xyi_A 195 GYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV----------------ADDQKLMI 258 (430)
T ss_dssp TEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEE----------------ETTSEEEE
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEE----------------eCCCeEEE
Confidence 48888999999999999885432 221110000 00111222222 234444432 34588999
Q ss_pred EECCCC---cEEeeecCCCCCCCCcceEEe--CC-EEEEeeecCCCcEEEEeCCC-CcEeEEEecCCceecceEEe--CC
Q 040693 282 MDASNG---NVLWSTADPSNGTAPGPVTVA--NG-VLFGGSTYRQGPIYAMDVKT-GKILWSYDTGATIYGGASVS--NG 352 (382)
Q Consensus 282 ~d~~tG---~~~W~~~~~~~~~~~~~~~~~--~~-~v~~~~~~~~g~l~~ld~~t-G~ilw~~~~~~~~~~~p~~~--~g 352 (382)
+|.+++ +.......... ....+.+. +. +++.++ .++.|..+|..+ ++.+..+........+.... +.
T Consensus 259 ~d~~~~~~~~~~~~~~~~~~--~v~~i~~~p~~~~~l~tg~--~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~ 334 (430)
T 2xyi_A 259 WDTRNNNTSKPSHTVDAHTA--EVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE 334 (430)
T ss_dssp EETTCSCSSSCSEEEECCSS--CEEEEEECSSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCT
T ss_pred EECCCCCCCcceeEeecCCC--CeEEEEeCCCCCCEEEEEe--CCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCC
Confidence 999988 56666643321 11222232 33 455555 489999999987 56666665433333333332 33
Q ss_pred EEEEEeCceeEeecCCccC
Q 040693 353 CIYMGNGYKVTVGFGNKNF 371 (382)
Q Consensus 353 ~lyv~~~~g~~~~~~~~~~ 371 (382)
.++++.+....+.+|.+..
T Consensus 335 ~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 335 TILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TEEEEEETTSCCEEEEGGG
T ss_pred CEEEEEeCCCcEEEEeCCC
Confidence 4555554434466676655
No 243
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.04 E-value=0.036 Score=53.14 Aligned_cols=122 Identities=8% Similarity=-0.044 Sum_probs=62.2
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCC-CCccccee--eeCCeEEEEecCccccccccCCCCCCCCCceEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLG-GGAMWGAA--TDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVA 281 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~-g~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a 281 (382)
+..|++++.|+.+..+|..+++..-.......... ........ ..+..+.++... +....... ....+.|..
T Consensus 308 g~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~----~~~~~~i~i 382 (435)
T 4e54_B 308 GARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYP-DPNFKSCT----PYELRTIDV 382 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCC-CTTSCCSS----TTCCCCEEE
T ss_pred CCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcC-CCCeEEEE----ecCCCEEEE
Confidence 46788889999999999999987665543211000 00000111 133444443221 11111111 122356899
Q ss_pred EECCCCcEEeeecCCCCCCCCcceEE-eCCEEEEeeecCCCcEEEEeCCCCcE
Q 040693 282 MDASNGNVLWSTADPSNGTAPGPVTV-ANGVLFGGSTYRQGPIYAMDVKTGKI 333 (382)
Q Consensus 282 ~d~~tG~~~W~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~g~l~~ld~~tG~i 333 (382)
+|..+|+.+.+...+..........+ .++.++++.. ++.|...|+++|+.
T Consensus 383 wd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~--d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 383 FDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM--GYHILIWSQQEART 433 (435)
T ss_dssp ECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC--SSEEEECCCC----
T ss_pred EECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc--CCcEEEEECCcCee
Confidence 99999999887654332111221122 2444444443 77898889888875
No 244
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.01 E-value=0.027 Score=49.68 Aligned_cols=131 Identities=15% Similarity=0.075 Sum_probs=71.5
Q ss_pred EEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeee-CCeEEEEecCccccccccCCCCCCCCCceEEEEECC
Q 040693 207 IVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATD-ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS 285 (382)
Q Consensus 207 ~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~ 285 (382)
.+++...++.++.+|.+++ ..+.+.... .....+.+++ ++.+|++.. ..+.|..+|..
T Consensus 79 ~l~v~~~~~~i~~~d~~~~-~~~~~~~~~----~~~p~~i~~~~~g~l~v~~~----------------~~~~i~~~~~~ 137 (270)
T 1rwi_B 79 TVYVTDFNNRVVTLAAGSN-NQTVLPFDG----LNYPEGLAVDTQGAVYVADR----------------GNNRVVKLAAG 137 (270)
T ss_dssp CEEEEETTTEEEEECTTCS-CCEECCCCS----CSSEEEEEECTTCCEEEEEG----------------GGTEEEEECTT
T ss_pred CEEEEcCCCEEEEEeCCCc-eEeeeecCC----cCCCcceEECCCCCEEEEEC----------------CCCEEEEEECC
Confidence 3655555788999998754 444433211 0122333333 567888632 23678889876
Q ss_pred CCcEEeeecCCCCCCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEeCce
Q 040693 286 NGNVLWSTADPSNGTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGNGYK 361 (382)
Q Consensus 286 tG~~~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~~g 361 (382)
+.+......... .....+.++ ++.+|++.. ..+.|+.+|.++++...............++ .+|+||+++...
T Consensus 138 ~~~~~~~~~~~~--~~p~~i~~~~~g~l~v~~~-~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~ 212 (270)
T 1rwi_B 138 SKTQTVLPFTGL--NDPDGVAVDNSGNVYVTDT-DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNT 212 (270)
T ss_dssp CCSCEECCCCSC--CSCCCEEECTTCCEEEEEG-GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTT
T ss_pred CceeEeeccccC--CCceeEEEeCCCCEEEEEC-CCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCC
Confidence 665543322111 122334454 467888763 3578999998876654322111111223334 356999988643
No 245
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.01 E-value=0.017 Score=52.76 Aligned_cols=161 Identities=12% Similarity=0.046 Sum_probs=75.8
Q ss_pred EEEE-ccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCcccc-ccccCCCCCCCCCceEEEEEC
Q 040693 208 VVAV-QKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHK-NFNLKPSKNSTIAGGWVAMDA 284 (382)
Q Consensus 208 v~~~-~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~-~~~~~~~~~~~~~g~v~a~d~ 284 (382)
++++ ..++.|+.+|.+ |+...-...... .........++ .++.+|++....... .+...........+.|+.+|+
T Consensus 99 l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~-~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~ 176 (305)
T 3dr2_A 99 LVHCEHGRRAITRSDAD-GQAHLLVGRYAG-KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP 176 (305)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECEETT-EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred EEEEECCCCEEEEECCC-CCEEEEEeccCC-CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcC
Confidence 4444 445679999986 775433221110 00001111222 366788752210000 000000001122467999999
Q ss_pred CCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecC-----CCcEEEEeCCCCcEeEEEe----cCCceecceEE-eCC
Q 040693 285 SNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYR-----QGPIYAMDVKTGKILWSYD----TGATIYGGASV-SNG 352 (382)
Q Consensus 285 ~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~-----~g~l~~ld~~tG~ilw~~~----~~~~~~~~p~~-~~g 352 (382)
++|+..-...... ...+.+. +..+|++.. . .+.|+.+|.+.+. +-... ..........+ .+|
T Consensus 177 ~~g~~~~~~~~~~----p~gl~~spdg~~lyv~~~-~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G 250 (305)
T 3dr2_A 177 DGSPLQRMADLDH----PNGLAFSPDEQTLYVSQT-PEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGG 250 (305)
T ss_dssp SSCCCEEEEEESS----EEEEEECTTSSEEEEEEC-CC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTS
T ss_pred CCCcEEEEecCCC----CcceEEcCCCCEEEEEec-CCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCC
Confidence 9997653322111 1122332 346888764 2 2689999887554 22111 11111123333 468
Q ss_pred EEEEEeCceeEeecCCccCCCCCeEEEEE
Q 040693 353 CIYMGNGYKVTVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 353 ~lyv~~~~g~~~~~~~~~~~~g~~l~~~~ 381 (382)
+||+++..| ++.+++ .|+.+-.+.
T Consensus 251 ~lwv~~~~g----v~~~~~-~g~~~~~~~ 274 (305)
T 3dr2_A 251 WLWSSSGTG----VCVFDS-DGQLLGHIP 274 (305)
T ss_dssp CEEECCSSE----EEEECT-TSCEEEEEE
T ss_pred CEEEecCCc----EEEECC-CCCEEEEEE
Confidence 899988554 344555 566665553
No 246
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.01 E-value=0.061 Score=50.43 Aligned_cols=52 Identities=12% Similarity=-0.032 Sum_probs=33.9
Q ss_pred CCCceEEEEECCCCcEEeeec-CCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCC
Q 040693 274 TIAGGWVAMDASNGNVLWSTA-DPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVK 329 (382)
Q Consensus 274 ~~~g~v~a~d~~tG~~~W~~~-~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~ 329 (382)
..++.|..+|.++|+++-++. .... ....+.+ ++.++..++ .++.|..+|..
T Consensus 288 s~D~~V~iwd~~~~~~~~~~~~gH~~--~V~~v~fSpdg~~laS~S--~D~tvrvw~ip 342 (365)
T 4h5i_A 288 SNDNSIALVKLKDLSMSKIFKQAHSF--AITEVTISPDSTYVASVS--AANTIHIIKLP 342 (365)
T ss_dssp ETTSCEEEEETTTTEEEEEETTSSSS--CEEEEEECTTSCEEEEEE--TTSEEEEEECC
T ss_pred cCCCEEEEEECCCCcEEEEecCcccC--CEEEEEECCCCCEEEEEe--CCCeEEEEEcC
Confidence 345889999999999988764 2221 1222333 234555555 48999999874
No 247
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.99 E-value=0.089 Score=53.92 Aligned_cols=134 Identities=6% Similarity=-0.009 Sum_probs=69.0
Q ss_pred EEEEEeCCCCC----eeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcE
Q 040693 216 FAWALDRDSGS----LIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNV 289 (382)
Q Consensus 216 ~l~ald~~tG~----~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~ 289 (382)
.|+.++..|++ ++......+ .....+.. ++..|++..... .....|+.+|..+|+.
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~-----~~~~~~~~SpDG~~l~~~~~~~-------------~~~~~l~~~~~~~~~~ 264 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDP-----TTFLQSDLSRDGKYLFVYILRG-------------WSENDVYWKRPGEKDF 264 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCT-----TCEEEEEECTTSCCEEEEEEET-------------TTEEEEEEECTTCSSC
T ss_pred EEEEEECCCCchhceEEEecCCCC-----EEEEEEEECCCCCEEEEEEeCC-------------CCceEEEEEcCCCCce
Confidence 48889988886 333322111 11222222 555566553321 0224688888777754
Q ss_pred EeeecCCCCCCCCcceEEeCCEEEEeeec--CCCcEEEEeCCCCcE-eEEEecCC---ceecceEEeCCEEEEEeCceeE
Q 040693 290 LWSTADPSNGTAPGPVTVANGVLFGGSTY--RQGPIYAMDVKTGKI-LWSYDTGA---TIYGGASVSNGCIYMGNGYKVT 363 (382)
Q Consensus 290 ~W~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~g~l~~ld~~tG~i-lw~~~~~~---~~~~~p~~~~g~lyv~~~~g~~ 363 (382)
.--..... ....++..+++ +|+.+.. .++.|+.+|.++++. .|+.-++. .....+.+.+++|++....+..
T Consensus 265 ~~l~~~~~--~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~ 341 (695)
T 2bkl_A 265 RLLVKGVG--AKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDAT 341 (695)
T ss_dssp EEEEECSS--CCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTE
T ss_pred EEeecCCC--ceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCE
Confidence 43332221 12233333445 6666531 247899999988763 34443322 2344555568888877654444
Q ss_pred eecCCcc
Q 040693 364 VGFGNKN 370 (382)
Q Consensus 364 ~~~~~~~ 370 (382)
..++.++
T Consensus 342 ~~l~~~~ 348 (695)
T 2bkl_A 342 SEVRVAT 348 (695)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 4444444
No 248
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.97 E-value=0.23 Score=45.99 Aligned_cols=123 Identities=14% Similarity=0.001 Sum_probs=55.2
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccc---cccCCC--CC-CCCCceEEEEECCCCc
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKN---FNLKPS--KN-STIAGGWVAMDASNGN 288 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~---~~~~~~--~~-~~~~g~v~a~d~~tG~ 288 (382)
..++++|.+.-+..|+.-...+..........++.++.||+......... +..... .. ......+..+|+++.
T Consensus 217 ~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~- 295 (357)
T 2uvk_A 217 DAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG- 295 (357)
T ss_dssp CCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---
T ss_pred CceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC-
Confidence 45888887555677987543211111112223446778887643211000 000000 00 001135789999866
Q ss_pred EEeee--cCCCCCCCCcceEEeCCEEEEeee-cCC----CcEEEEeCCCCcEeEEEecC
Q 040693 289 VLWST--ADPSNGTAPGPVTVANGVLFGGST-YRQ----GPIYAMDVKTGKILWSYDTG 340 (382)
Q Consensus 289 ~~W~~--~~~~~~~~~~~~~~~~~~v~~~~~-~~~----g~l~~ld~~tG~ilw~~~~~ 340 (382)
.|+. +++..+.. ......++.+|+... ..+ ..++.|+.+++|.+-..+.+
T Consensus 296 -~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 296 -KWDKSGELSQGRAY-GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp --CEEEEECSSCCBS-SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred -ceeeCCCCCCCccc-ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 4664 34443332 333445665555432 111 35888899988877665544
No 249
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.94 E-value=0.16 Score=47.87 Aligned_cols=61 Identities=8% Similarity=0.013 Sum_probs=37.3
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceE-EEeeeCceeecEEEEEccCcEEEEE
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMM-LSMYRNKVKHDIVVAVQKSGFAWAL 220 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~g~~~~~v~~~~~~g~l~al 220 (382)
++.|...|..+++.+-....... ++. +...+++ ...++++..|+.+..+
T Consensus 165 D~tv~~Wd~~~~~~~~~~~~~~~----------------------------~v~~v~~~p~~--~~~l~~~~~d~~v~~w 214 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGYPLSS----------------------------PGISVQFRPSN--PNQLIVGERNGNIRIF 214 (393)
T ss_dssp TSEEEEEEEETTEEEEEEEECSS----------------------------CEEEEEEETTE--EEEEEEEETTSEEEEE
T ss_pred CCeEEEEECCCCceeeeecCCCC----------------------------CcEEEEECCCC--CceEEecCCCCEEEEE
Confidence 48899999888877655543322 222 1222333 4578889999999999
Q ss_pred eCCCCCeeeeec
Q 040693 221 DRDSGSLIWSME 232 (382)
Q Consensus 221 d~~tG~~~W~~~ 232 (382)
|..+++......
T Consensus 215 d~~t~~~~~~~~ 226 (393)
T 4gq1_A 215 DWTLNLSAEENS 226 (393)
T ss_dssp ETTCCC------
T ss_pred ECCCCccccccc
Confidence 999998765543
No 250
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.94 E-value=0.095 Score=48.59 Aligned_cols=56 Identities=9% Similarity=0.146 Sum_probs=34.6
Q ss_pred eEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC-ceecceEE-eCCEEEEEeCce
Q 040693 305 VTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA-TIYGGASV-SNGCIYMGNGYK 361 (382)
Q Consensus 305 ~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~-~~~~~p~~-~~g~lyv~~~~g 361 (382)
+.++ ++.+|++.. ..+.|.++|+++|++.-....+. ..-.+.++ .+++||+++...
T Consensus 253 ia~d~~G~l~va~~-~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 253 ISIDKDHNIYVGDL-AHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEECTTCCEEEEEG-GGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred EEECCCCCEEEEcc-CCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 4444 577888764 57889999996787543332221 11233444 478999987643
No 251
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.88 E-value=0.075 Score=49.47 Aligned_cols=145 Identities=8% Similarity=-0.003 Sum_probs=81.0
Q ss_pred cEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECC
Q 040693 206 DIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS 285 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~ 285 (382)
.+++++..++.+..+|..+|+.+-.++... .........+.+++. .++.+..+|..
T Consensus 72 ~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~------~v~~v~~~~~~~~~~------------------~~~~i~i~d~~ 127 (355)
T 3vu4_A 72 YVAFVTGVKEVVHIWDDVKKQDVSRIKVDA------PVKDLFLSREFIVVS------------------YGDVISVFKFG 127 (355)
T ss_dssp EEEEECSSTTEEEEEETTTTEEEEEEECSS------CEEEEEECSSEEEEE------------------ETTEEEEEESS
T ss_pred EEEEEECCccEEEEEECCCCcEEEEEECCC------ceEEEEEcCCEEEEE------------------EcCEEEEEECC
Confidence 344667778899999999999988877432 222223344445443 23678999999
Q ss_pred CC-cEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcE----------------eEEEecCCceecceE
Q 040693 286 NG-NVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKI----------------LWSYDTGATIYGGAS 348 (382)
Q Consensus 286 tG-~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~i----------------lw~~~~~~~~~~~p~ 348 (382)
++ +.+.+...+ .....+....+.+++...+|.|..+|..+++. +-.+...........
T Consensus 128 ~~~~~~~~~~~~-----~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~ 202 (355)
T 3vu4_A 128 NPWKRITDDIRF-----GGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVR 202 (355)
T ss_dssp TTCCBSSCCEEE-----EEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEE
T ss_pred CCceeeEEeccC-----CceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEE
Confidence 88 666554431 11122223544443122589999999998761 333332222222222
Q ss_pred E-eCCEEEEE-eCceeEeecCCccCCCCCeEEEEE
Q 040693 349 V-SNGCIYMG-NGYKVTVGFGNKNFTSGTSLYAFC 381 (382)
Q Consensus 349 ~-~~g~lyv~-~~~g~~~~~~~~~~~~g~~l~~~~ 381 (382)
+ .+++++++ +.+|..+.+|.+ .+|+.+..|.
T Consensus 203 ~s~~g~~l~s~s~d~~~v~iwd~--~~~~~~~~~~ 235 (355)
T 3vu4_A 203 LNRKSDMVATCSQDGTIIRVFKT--EDGVLVREFR 235 (355)
T ss_dssp ECTTSSEEEEEETTCSEEEEEET--TTCCEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEC--CCCcEEEEEE
Confidence 3 35555554 445433666654 4588777664
No 252
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.87 E-value=0.32 Score=46.04 Aligned_cols=111 Identities=15% Similarity=-0.061 Sum_probs=62.0
Q ss_pred cEEEEEc-cC-cEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEE
Q 040693 206 DIVVAVQ-KS-GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVA 281 (382)
Q Consensus 206 ~~v~~~~-~~-g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a 281 (382)
+.||+.. .. +.|+.++.+ |+.+-..-... .....+.++ +++.||++.. ..+.|..
T Consensus 214 g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~----~~~PnGlavd~~~~~lY~aD~----------------~~~~I~~ 272 (386)
T 3v65_B 214 GTIYWTDWGNTPRIEASSMD-GSGRRIIADTH----LFWPNGLTIDYAGRRMYWVDA----------------KHHVIER 272 (386)
T ss_dssp TEEEEEECSSSCEEEEEETT-SCSCEEEECSS----CSCEEEEEEEGGGTEEEEEET----------------TTTEEEE
T ss_pred CeEEEeccCCCCEEEEEeCC-CCCcEEEEECC----CCCeeeEEEeCCCCEEEEEEC----------------CCCEEEE
Confidence 4444443 33 567777765 43332221110 011223444 4788998742 3467999
Q ss_pred EECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecC
Q 040693 282 MDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTG 340 (382)
Q Consensus 282 ~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~ 340 (382)
+|.......--..... .....+.+.++.+|++.. ..+.|..+|..+|+.+-.+..+
T Consensus 273 ~d~dG~~~~~~~~~~~--~~P~giav~~~~ly~td~-~~~~V~~~~~~~G~~~~~i~~~ 328 (386)
T 3v65_B 273 ANLDGSHRKAVISQGL--PHPFAITVFEDSLYWTDW-HTKSINSANKFTGKNQEIIRNK 328 (386)
T ss_dssp ECTTSCSCEEEECSSC--SSEEEEEEETTEEEEEET-TTTEEEEEETTTCCSCEEEECS
T ss_pred EeCCCCeeEEEEECCC--CCceEEEEECCEEEEeeC-CCCeEEEEECCCCcceEEEccC
Confidence 9976433222222111 122334557888998874 6789999998889887766543
No 253
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.87 E-value=0.28 Score=45.26 Aligned_cols=145 Identities=9% Similarity=-0.079 Sum_probs=76.4
Q ss_pred cEEEE-EccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 206 DIVVA-VQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 206 ~~v~~-~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+.||+ ....+.+..++.+......-.... .....+.++ .++.+|++... ..+.|..+
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~-----~~~P~giavdp~~g~ly~td~~---------------~~~~I~r~ 150 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQE-----LDQPRAIALDPSSGFMYWTDWG---------------EVPKIERA 150 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSS-----CSSEEEEEEEGGGTEEEEEECS---------------SSCEEEEE
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCC-----CCCccEEEEeCCCCEEEEEecC---------------CCCEEEEE
Confidence 34444 445667888887633222111110 112233444 36888887421 13678888
Q ss_pred ECCCCcEEeee-cCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEEec-CCceecceEEeCCEEEEEe
Q 040693 283 DASNGNVLWST-ADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSYDT-GATIYGGASVSNGCIYMGN 358 (382)
Q Consensus 283 d~~tG~~~W~~-~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~-~~~~~~~p~~~~g~lyv~~ 358 (382)
+.. |+.+-.. ... ......+.++ ++++|++.. ..+.|+.+|.+ |+..-.+-. ....-...++.++.+|++.
T Consensus 151 ~~d-G~~~~~~~~~~--l~~Pnglavd~~~~~lY~aD~-~~~~I~~~d~d-G~~~~~~~~~~~~~P~glav~~~~lywtd 225 (318)
T 3sov_A 151 GMD-GSSRFIIINSE--IYWPNGLTLDYEEQKLYWADA-KLNFIHKSNLD-GTNRQAVVKGSLPHPFALTLFEDILYWTD 225 (318)
T ss_dssp ETT-SCSCEEEECSS--CSCEEEEEEETTTTEEEEEET-TTTEEEEEETT-SCSCEEEECSCCSCEEEEEEETTEEEEEE
T ss_pred EcC-CCCeEEEEECC--CCCccEEEEeccCCEEEEEEC-CCCEEEEEcCC-CCceEEEecCCCCCceEEEEeCCEEEEEe
Confidence 875 4322221 111 1122344554 689999875 57889999986 332222211 1122234556889999997
Q ss_pred CceeEeecCCccCCCCCeE
Q 040693 359 GYKVTVGFGNKNFTSGTSL 377 (382)
Q Consensus 359 ~~g~~~~~~~~~~~~g~~l 377 (382)
.... .++.++..+|+.+
T Consensus 226 ~~~~--~V~~~~~~~G~~~ 242 (318)
T 3sov_A 226 WSTH--SILACNKYTGEGL 242 (318)
T ss_dssp TTTT--EEEEEETTTCCSC
T ss_pred cCCC--eEEEEECCCCCce
Confidence 6544 2455666667643
No 254
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.86 E-value=0.069 Score=55.10 Aligned_cols=74 Identities=16% Similarity=0.093 Sum_probs=46.4
Q ss_pred eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeC
Q 040693 249 DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDV 328 (382)
Q Consensus 249 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~ 328 (382)
+++.||++.. ..+.|..+|.....+.-.............+.++++.+|++.. ..+.|..+|+
T Consensus 550 ~~~~LY~aD~----------------~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~-~~~~V~~~d~ 612 (699)
T 1n7d_A 550 LSGRLYWVDS----------------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI-INEAIFSANR 612 (699)
T ss_dssp TTCCEEEEET----------------TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECS-TTTCEEEEET
T ss_pred cCCEEEEEec----------------CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeC-CCCeEEEEEc
Confidence 4688998742 3467899998643222111211111123345567788888874 6789999999
Q ss_pred CCCcEeEEEec
Q 040693 329 KTGKILWSYDT 339 (382)
Q Consensus 329 ~tG~ilw~~~~ 339 (382)
.+|+.+-.+..
T Consensus 613 ~~G~~~~~i~~ 623 (699)
T 1n7d_A 613 LTGSDVNLLAE 623 (699)
T ss_dssp TTEEEEECCCT
T ss_pred cCCCceEEeec
Confidence 99988766644
No 255
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.85 E-value=0.26 Score=44.59 Aligned_cols=130 Identities=10% Similarity=0.133 Sum_probs=73.6
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
..++.+|..+. .|+.-.+.+ ........+..++.+|+......... .......+..+|+++. .|+.-
T Consensus 118 ~~~~~~d~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~~~-------~~~~~~~~~~yd~~~~--~W~~~ 184 (306)
T 3ii7_A 118 YLFECYDTRTE--SWHTKPSML--TQRCSHGMVEANGLIYVCGGSLGNNV-------SGRVLNSCEVYDPATE--TWTEL 184 (306)
T ss_dssp CCEEEEETTTT--EEEEECCCS--SCCBSCEEEEETTEEEEECCEESCTT-------TCEECCCEEEEETTTT--EEEEE
T ss_pred eeEEEEeCCCC--ceEeCCCCc--CCcceeEEEEECCEEEEECCCCCCCC-------cccccceEEEeCCCCC--eEEEC
Confidence 45899999875 477653321 12223333446778888643211000 0001466999999987 57754
Q ss_pred --CCCCCCCCcceEEeCCEEEEeeec----CCCcEEEEeCCCCcEeEEEec--CCc-eecceEEeCCEEEEEeCc
Q 040693 295 --DPSNGTAPGPVTVANGVLFGGSTY----RQGPIYAMDVKTGKILWSYDT--GAT-IYGGASVSNGCIYMGNGY 360 (382)
Q Consensus 295 --~~~~~~~~~~~~~~~~~v~~~~~~----~~g~l~~ld~~tG~ilw~~~~--~~~-~~~~p~~~~g~lyv~~~~ 360 (382)
.+.. .......+.++.+|+.... ....++++|+++.+ |+.-. +.. ...+.++.+++||+..+.
T Consensus 185 ~~~p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 256 (306)
T 3ii7_A 185 CPMIEA-RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNE--WKMVSPMPWKGVTVKCAAVGSIVYVLAGF 256 (306)
T ss_dssp CCCSSC-CBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTE--EEECCCCSCCBSCCEEEEETTEEEEEECB
T ss_pred CCccch-hhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCc--EEECCCCCCCccceeEEEECCEEEEEeCc
Confidence 3332 2233344557777775320 12468999998764 76532 222 234456679999998764
No 256
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.82 E-value=0.26 Score=47.56 Aligned_cols=135 Identities=11% Similarity=0.122 Sum_probs=71.4
Q ss_pred cEEEEE-ccCcEEEEEeCCCCCeeeeec-cCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEE
Q 040693 206 DIVVAV-QKSGFAWALDRDSGSLIWSME-AGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVA 281 (382)
Q Consensus 206 ~~v~~~-~~~g~l~ald~~tG~~~W~~~-~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a 281 (382)
+.||+. ..++.++.+|.++|+.....- ... .......++ +++.||+... ....|+.
T Consensus 240 G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~----~~~~~~ia~dpdG~~LYvad~----------------~~~~I~~ 299 (433)
T 4hw6_A 240 GKIYYTRYHHAMISSYDPATGTLTEEEVMMDT----KGSNFHIVWHPTGDWAYIIYN----------------GKHCIYR 299 (433)
T ss_dssp CCEEECBTTCSEEEEECTTTCCEEEEEEECSC----CSSCEEEEECTTSSEEEEEET----------------TTTEEEE
T ss_pred CeEEEEECCCCEEEEEECCCCeEEEEEeccCC----CCCcccEEEeCCCCEEEEEeC----------------CCCEEEE
Confidence 445544 456889999999998744332 211 111122333 4566888742 2467888
Q ss_pred EECC--CCcEE----eeecCCCCC----------CC-CcceEE---------e-CCEEEEeeecCCCcEEEEeCCCCcEe
Q 040693 282 MDAS--NGNVL----WSTADPSNG----------TA-PGPVTV---------A-NGVLFGGSTYRQGPIYAMDVKTGKIL 334 (382)
Q Consensus 282 ~d~~--tG~~~----W~~~~~~~~----------~~-~~~~~~---------~-~~~v~~~~~~~~g~l~~ld~~tG~il 334 (382)
+|.. +++.. +--...... .. ..-+.+ + ++.+|++.. ..++|..|++ +|++.
T Consensus 300 ~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~-~n~~I~~~~~-~G~v~ 377 (433)
T 4hw6_A 300 VDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDR-DSHTVRVLTP-EGRVT 377 (433)
T ss_dssp EEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEET-TTTEEEEECT-TSEEE
T ss_pred EeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEEC-CCCEEEEECC-CCCEE
Confidence 7754 45321 111101000 00 111444 3 468888874 5678999996 57665
Q ss_pred EEEecCC--------------ceecc---eEEe--CCEEEEEeCcee
Q 040693 335 WSYDTGA--------------TIYGG---ASVS--NGCIYMGNGYKV 362 (382)
Q Consensus 335 w~~~~~~--------------~~~~~---p~~~--~g~lyv~~~~g~ 362 (382)
--.-.+. ..+.. .++. ++.|||+.....
T Consensus 378 t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~ 424 (433)
T 4hw6_A 378 TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNH 424 (433)
T ss_dssp EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGT
T ss_pred EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCC
Confidence 4332211 01222 3445 799999986533
No 257
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.79 E-value=0.016 Score=59.82 Aligned_cols=145 Identities=10% Similarity=-0.010 Sum_probs=72.7
Q ss_pred EEEEE-ccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 207 IVVAV-QKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 207 ~v~~~-~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
.||+. ...+.|..+|.+........... .....+.++ .++.||++... ..+.|+.++
T Consensus 466 ~LY~tD~~~~~I~v~d~dg~~~~~l~~~~-----~~~P~giavDp~~g~ly~td~~---------------~~~~I~~~~ 525 (699)
T 1n7d_A 466 NIYWTDSVLGTVSVADTKGVKRKTLFREQ-----GSKPRAIVVDPVHGFMYWTDWG---------------TPAKIKKGG 525 (699)
T ss_dssp BCEECCTTTSCEEEEBSSSCCEEEECCCS-----SCCCCCEECCSSSSCCEECCCS---------------SSCCEEBCC
T ss_pred cEEEEeccCCeEEEEecCCCceEEEEeCC-----CCCcceEEEccCCCcEEEcccC---------------CCCeEEEEe
Confidence 34443 45567888887744332222211 011223334 36788886321 124566666
Q ss_pred CCCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEEecC-C--ceecceEEeCCEEEEEe
Q 040693 284 ASNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTG-A--TIYGGASVSNGCIYMGN 358 (382)
Q Consensus 284 ~~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~-~--~~~~~p~~~~g~lyv~~ 358 (382)
+......-..... ......++++ +++||++.. ..+.|+.+|++ |..+-.+-.. . ..-.+..+.+++||++.
T Consensus 526 ~dG~~~~~l~~~~--l~~PnGlavd~~~~~LY~aD~-~~~~I~~~d~d-G~~~~~~~~~~~~~~~P~glavd~~~lywtd 601 (699)
T 1n7d_A 526 LNGVDIYSLVTEN--IQWPNGITLDLLSGRLYWVDS-KLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 601 (699)
T ss_dssp SSSCCCCEESCSS--CSSCCCEEECTTTCCEEEEET-TTTEEEEECSS-SSCCEEECCCSSSCSSCCCCEEETTEEEEEC
T ss_pred CCCCCeeEEEeCC--CCCccEEEEeccCCEEEEEec-CCCeEEEEccC-CCceEEEEecCCcCCCceEeEEECCEEEEEe
Confidence 5322111111111 1123345554 578888874 56789999986 3322222211 1 12234566888999998
Q ss_pred CceeEeecCCccCCCCCeE
Q 040693 359 GYKVTVGFGNKNFTSGTSL 377 (382)
Q Consensus 359 ~~g~~~~~~~~~~~~g~~l 377 (382)
..... ++.++..+|+.+
T Consensus 602 ~~~~~--V~~~d~~~G~~~ 618 (699)
T 1n7d_A 602 IINEA--IFSANRLTGSDV 618 (699)
T ss_dssp STTTC--EEEEETTTEEEE
T ss_pred CCCCe--EEEEEccCCCce
Confidence 64332 344555556554
No 258
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.78 E-value=0.3 Score=44.36 Aligned_cols=103 Identities=16% Similarity=0.135 Sum_probs=58.0
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
..++.+|..+. .|+.-...+ ........++.++.||+....... .....+..+|+++. .|+.-
T Consensus 184 ~~~~~yd~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~-----------~~~~~v~~yd~~~~--~W~~~ 246 (308)
T 1zgk_A 184 NSAECYYPERN--EWRMITAMN--TIRSGAGVCVLHNCIYAAGGYDGQ-----------DQLNSVERYDVETE--TWTFV 246 (308)
T ss_dssp CCEEEEETTTT--EEEECCCCS--SCCBSCEEEEETTEEEEECCBCSS-----------SBCCCEEEEETTTT--EEEEC
T ss_pred ceEEEEeCCCC--eEeeCCCCC--CccccceEEEECCEEEEEeCCCCC-----------CccceEEEEeCCCC--cEEEC
Confidence 45899998765 677653321 112223334467888876432110 12366999999876 57753
Q ss_pred --CCCCCCCCcceEEeCCEEEEeeec----CCCcEEEEeCCCCcEeEEE
Q 040693 295 --DPSNGTAPGPVTVANGVLFGGSTY----RQGPIYAMDVKTGKILWSY 337 (382)
Q Consensus 295 --~~~~~~~~~~~~~~~~~v~~~~~~----~~g~l~~ld~~tG~ilw~~ 337 (382)
.+... ......+.++.+|+.... ....++++|+++.+ |+.
T Consensus 247 ~~~p~~r-~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~ 292 (308)
T 1zgk_A 247 APMKHRR-SALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT--WSE 292 (308)
T ss_dssp CCCSSCC-BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE--EEE
T ss_pred CCCCCCc-cceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCE--Eee
Confidence 33222 233334456777765421 13468899998654 654
No 259
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.77 E-value=0.037 Score=55.24 Aligned_cols=145 Identities=10% Similarity=-0.032 Sum_probs=78.6
Q ss_pred EeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCccccee--eeCCeEEEEecCccccccccCCCCCCC
Q 040693 197 SMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAA--TDERRIYTNIANSQHKNFNLKPSKNST 274 (382)
Q Consensus 197 ~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~ 274 (382)
....+| +.++++...++.+..+|.++|+..--..... +.+. -|+..++...... .
T Consensus 116 ~~s~dg--~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--------~~~~~spDG~~la~~~~~~-------------~ 172 (582)
T 3o4h_A 116 SGVDTG--EAVVFTGATEDRVALYALDGGGLRELARLPG--------FGFVSDIRGDLIAGLGFFG-------------G 172 (582)
T ss_dssp EEEECS--SCEEEEEECSSCEEEEEEETTEEEEEEEESS--------CEEEEEEETTEEEEEEEEE-------------T
T ss_pred eeCCCC--CeEEEEecCCCCceEEEccCCcEEEeecCCC--------ceEEECCCCCEEEEEEEcC-------------C
Confidence 444555 4566666555556677888887554433211 2222 2677776553221 1
Q ss_pred CCceEEEEECCCCcEEeeecCCCCCCCCcceEE-eCCEEEEeeecCCC--cEEEEeCCCCcEeEEEecCCceecceE---
Q 040693 275 IAGGWVAMDASNGNVLWSTADPSNGTAPGPVTV-ANGVLFGGSTYRQG--PIYAMDVKTGKILWSYDTGATIYGGAS--- 348 (382)
Q Consensus 275 ~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~g--~l~~ld~~tG~ilw~~~~~~~~~~~p~--- 348 (382)
....|+.+|+.+|+..--..... ....+... ++..++... .++ .|+.+|.++|+.. ...........+.
T Consensus 173 ~~~~i~~~d~~~g~~~~l~~~~~--~~~~~~~SpDG~~l~~~~--~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~ 247 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGLRVFDSGEG--SFSSASISPGMKVTAGLE--TAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTA 247 (582)
T ss_dssp TEEEEEEEETTTCCCEEECCSSC--EEEEEEECTTSCEEEEEE--CSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSE
T ss_pred CCeEEEEEcCCCCCceEeecCCC--ccccceECCCCCEEEEcc--CCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcc
Confidence 12569999999998763322221 11222222 344566333 466 8999999999987 4332222222233
Q ss_pred -----E-eCCEEEEEeCceeEeecCCc
Q 040693 349 -----V-SNGCIYMGNGYKVTVGFGNK 369 (382)
Q Consensus 349 -----~-~~g~lyv~~~~g~~~~~~~~ 369 (382)
. .+|+++++...+....+|.+
T Consensus 248 ~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 248 ITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred ccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 3 45677776654444566655
No 260
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.75 E-value=0.43 Score=49.05 Aligned_cols=144 Identities=10% Similarity=0.025 Sum_probs=72.1
Q ss_pred cEEEEEccCc--EEEEEeCCCCCeeeeeccCCCCCC-CCcccceee-e--CCeEEEEecCccccccccCCCCCCCCCceE
Q 040693 206 DIVVAVQKSG--FAWALDRDSGSLIWSMEAGPGGLG-GGAMWGAAT-D--ERRIYTNIANSQHKNFNLKPSKNSTIAGGW 279 (382)
Q Consensus 206 ~~v~~~~~~g--~l~ald~~tG~~~W~~~~~~~~~~-g~~~~~~~~-~--~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v 279 (382)
.++++++.++ .++.+|..+. .|+.-....... .......++ + .+.||+..+..... ....+.+
T Consensus 502 ~iyv~GG~~~~~~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~---------~~~~~~v 570 (695)
T 2zwa_A 502 NVLILGGVTEGPAMLLYNVTEE--IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQ---------TTVSDKA 570 (695)
T ss_dssp CEEEECCBCSSCSEEEEETTTT--EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTS---------SCBCCEE
T ss_pred EEEEECCCCCCCCEEEEECCCC--ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCC---------CeeeCcE
Confidence 3444444332 6999999875 488654311011 111222122 2 26788764321100 0223679
Q ss_pred EEEECCCCc----EEeeecC--C-CCCCCCcceEEeCCEEEEeeec-------CCCcEEEEeCCCCcEeEEE-ecCCce-
Q 040693 280 VAMDASNGN----VLWSTAD--P-SNGTAPGPVTVANGVLFGGSTY-------RQGPIYAMDVKTGKILWSY-DTGATI- 343 (382)
Q Consensus 280 ~a~d~~tG~----~~W~~~~--~-~~~~~~~~~~~~~~~v~~~~~~-------~~g~l~~ld~~tG~ilw~~-~~~~~~- 343 (382)
+.+|+.+.+ ..|+.-. + ......+...+.++.+|+.... ....++++|+.+.+ |+. +++...
T Consensus 571 ~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~--W~~~~~p~~~~ 648 (695)
T 2zwa_A 571 IIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET--LTSIPISRRIW 648 (695)
T ss_dssp EEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE--EEECCCCHHHH
T ss_pred EEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe--EEEeecccccc
Confidence 999999887 4576431 1 2222333344443766665321 13569999998764 763 222111
Q ss_pred ---------ecceEEeCCEEEEEeCcee
Q 040693 344 ---------YGGASVSNGCIYMGNGYKV 362 (382)
Q Consensus 344 ---------~~~p~~~~g~lyv~~~~g~ 362 (382)
.+..++.+++|||..+.+.
T Consensus 649 ~~~~p~~~gh~~~~~~~g~i~v~GGg~~ 676 (695)
T 2zwa_A 649 EDHSLMLAGFSLVSTSMGTIHIIGGGAT 676 (695)
T ss_dssp HHSCCCCSSCEEECC---CEEEECCEEE
T ss_pred CCCCccceeeeEEEeCCCEEEEEeCCcc
Confidence 1222234558999877544
No 261
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.75 E-value=0.011 Score=61.40 Aligned_cols=107 Identities=7% Similarity=-0.037 Sum_probs=59.7
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--e---CCeEEEEecCccccccccCCCCCCCCCceE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--D---ERRIYTNIANSQHKNFNLKPSKNSTIAGGW 279 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~---~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v 279 (382)
+..++++..+|.+..+|..+++..+.....-. ........... + +..++.+ ..++.|
T Consensus 170 ~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~-~h~~~V~~l~~sp~~~~~~~l~s~-----------------s~Dg~I 231 (753)
T 3jro_A 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYLASV-----------------SQDRTC 231 (753)
T ss_dssp GCCEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEE-----------------ESSSCE
T ss_pred CCEEEEEECCCeEEEEeccCCcccceeeeeec-CCCCcEEEEEeccCCCCCCEEEEE-----------------ecCCEE
Confidence 46788888899999999988865544322100 00112222222 2 3344443 345789
Q ss_pred EEEECCCCcEEeeecCCCC---CCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCC
Q 040693 280 VAMDASNGNVLWSTADPSN---GTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTG 331 (382)
Q Consensus 280 ~a~d~~tG~~~W~~~~~~~---~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG 331 (382)
..+|..+++..+....... ......+.+ ++..++.++ .+|.|+.+|..++
T Consensus 232 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s--~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 232 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG--GDNKVTLWKENLE 286 (753)
T ss_dssp EEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC--SSSCEECCBCCSS
T ss_pred EEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc--CCCEEEEEecCCC
Confidence 9999999865544332211 011122233 234566555 4899999998754
No 262
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.70 E-value=0.35 Score=44.05 Aligned_cols=127 Identities=15% Similarity=0.159 Sum_probs=72.0
Q ss_pred cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 215 GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
..++.+|..+. .|+.-.+.+ ........++.++.||+..+.... ......+..+|+++.+ |+.-
T Consensus 127 ~~~~~yd~~~~--~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~----------~~~~~~~~~yd~~~~~--W~~~ 190 (318)
T 2woz_A 127 DSVLCYDPVAA--KWSEVKNLP--IKVYGHNVISHNGMIYCLGGKTDD----------KKCTNRVFIYNPKKGD--WKDL 190 (318)
T ss_dssp EEEEEEETTTT--EEEEECCCS--SCEESCEEEEETTEEEEECCEESS----------SCBCCCEEEEETTTTE--EEEE
T ss_pred ceEEEEeCCCC--CEeECCCCC--CcccccEEEEECCEEEEEcCCCCC----------CCccceEEEEcCCCCE--EEEC
Confidence 35899998865 577643321 111223334467888876432110 0223569999998874 7754
Q ss_pred --CCCCCCCCcceEEeCCEEEEeeec-C---CCcEEEEeCCCCcEeEEEec--CCc-eecceEEeCCEEEEEeCc
Q 040693 295 --DPSNGTAPGPVTVANGVLFGGSTY-R---QGPIYAMDVKTGKILWSYDT--GAT-IYGGASVSNGCIYMGNGY 360 (382)
Q Consensus 295 --~~~~~~~~~~~~~~~~~v~~~~~~-~---~g~l~~ld~~tG~ilw~~~~--~~~-~~~~p~~~~g~lyv~~~~ 360 (382)
.+... ......+.++.+|+.... . ...++++|+++.+ |+.-. +.. ...+.++.+++||+..+.
T Consensus 191 ~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 262 (318)
T 2woz_A 191 APMKTPR-SMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK--WEVMTEFPQERSSISLVSLAGSLYAIGGF 262 (318)
T ss_dssp CCCSSCC-BSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC--EEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CCCCCCc-ccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe--EEECCCCCCcccceEEEEECCEEEEECCe
Confidence 33322 223334556766665421 1 2358899998764 76532 222 234556789999998664
No 263
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.69 E-value=0.008 Score=56.03 Aligned_cols=21 Identities=14% Similarity=0.022 Sum_probs=16.5
Q ss_pred ecEEEEEccCcEEEEEeCCCC
Q 040693 205 HDIVVAVQKSGFAWALDRDSG 225 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG 225 (382)
+..|+++..|+.+..+|..++
T Consensus 158 ~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 158 NVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp SSEEEEEESSSCEEEEEECCS
T ss_pred CCEEEEEeCCCEEEEEEEEec
Confidence 357888888999999998643
No 264
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.69 E-value=0.16 Score=47.59 Aligned_cols=101 Identities=11% Similarity=0.182 Sum_probs=60.7
Q ss_pred CceEEEEEC---C----CCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCC-----CCcEeEEEecCC
Q 040693 276 AGGWVAMDA---S----NGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVK-----TGKILWSYDTGA 341 (382)
Q Consensus 276 ~g~v~a~d~---~----tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~-----tG~ilw~~~~~~ 341 (382)
.+.+.-+++ . +++++.++.++.. .-.+.++ .+.+|++.. +..|+.+|++ +++++.++..+.
T Consensus 152 ~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq---~EgcvvDd~~g~Lyv~eE--d~GIw~~da~p~~~~~~~~v~~~~~g~ 226 (355)
T 3amr_A 152 EGEFEQYELKADKNGYISGKKVRAFKMNSQ---TEGMAADDEYGRLYIAEE--DEAIWKFSAEPDGGSNGTVIDRADGRH 226 (355)
T ss_dssp SSEEEEEEEEECTTSCEEEEEEEEEECSSC---EEEEEEETTTTEEEEEET--TTEEEEEECSTTSCSCCEEEEEBSSSS
T ss_pred CCeEEEEEEEeCCCCcccceEEEEecCCCC---cceEEEcCCCCeEEEecc--cceEEEEeCCcCCCCCceEEEEecCCc
Confidence 366655444 3 4477788887652 2233454 489999984 5669999965 477887665432
Q ss_pred --ceecceEEe-C----CEEEEEeCceeEeecCCccCCCCCeEEEEEC
Q 040693 342 --TIYGGASVS-N----GCIYMGNGYKVTVGFGNKNFTSGTSLYAFCV 382 (382)
Q Consensus 342 --~~~~~p~~~-~----g~lyv~~~~g~~~~~~~~~~~~g~~l~~~~~ 382 (382)
.-....++. . +.|++++.......+|... .+.+.+-+|++
T Consensus 227 l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~-~~~~~vg~f~I 273 (355)
T 3amr_A 227 LTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ-GKNKYVADFRI 273 (355)
T ss_dssp BCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS-TTCCEEEEEEE
T ss_pred cccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC-CCCcEEEEEEe
Confidence 122344442 2 4677777544455666553 25777877753
No 265
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.65 E-value=0.44 Score=44.61 Aligned_cols=155 Identities=7% Similarity=-0.020 Sum_probs=82.5
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCccccee-eeCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAA-TDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
+..|+.++.|+.+...|.+||+.+..+........ .....+ ..++.+++...+... .+.+.. +..++++..+|
T Consensus 193 ~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~--~v~~vafSpdG~~lvs~s~~~~-~w~laS---Gs~D~tIklWd 266 (356)
T 2w18_A 193 QEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQA--SVCHKAYSEMGLLFIVLSHPCA-KESESL---RSPVFQLIVIN 266 (356)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCC---C--CCEEEEEEETTEEEEEEC----------------CCEEEEEEE
T ss_pred CceEEEecCCCcEEEEECCCCcEEEEEcCCCccee--eeEEEEECCCCCEEEEeccCCC-cceeec---cCCCcEEEEEE
Confidence 46788889999999999999999998863211000 110001 124444443222111 111111 14568899999
Q ss_pred CCCCcEEeeecC--CCCCCCCcce--EEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC-ceecceEE-eCCEEEEE
Q 040693 284 ASNGNVLWSTAD--PSNGTAPGPV--TVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA-TIYGGASV-SNGCIYMG 357 (382)
Q Consensus 284 ~~tG~~~W~~~~--~~~~~~~~~~--~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~-~~~~~p~~-~~g~lyv~ 357 (382)
+++|+.+-.... +.+. ....+ ...+.++..++ .++.|...|.++|+.+-.++-.. ...+..++ .+++++++
T Consensus 267 ~~tgk~l~v~~~~~p~Gh-~~~~lsg~~sg~~lASgS--~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaS 343 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQ-AGRFLEGDVKDHCAAAIL--TSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLA 343 (356)
T ss_dssp TTTTEEEEEEEECCCTTC-CCCEEEEEEETTEEEEEE--TTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEE
T ss_pred CCCCEEEEEEEeeccCCC-cceeEccccCCCEEEEEc--CCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEE
Confidence 999988755421 2111 01111 11233444444 48999999999999998875332 23333333 35555554
Q ss_pred eCceeEeecCC
Q 040693 358 NGYKVTVGFGN 368 (382)
Q Consensus 358 ~~~g~~~~~~~ 368 (382)
.+.+..+++|.
T Consensus 344 GS~D~TIklWd 354 (356)
T 2w18_A 344 GQKDGNIFVYH 354 (356)
T ss_dssp ECTTSCEEEEE
T ss_pred EECCCcEEEec
Confidence 44444455543
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.64 E-value=0.44 Score=44.44 Aligned_cols=110 Identities=15% Similarity=-0.059 Sum_probs=61.4
Q ss_pred cEEEEEc-cC-cEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEE
Q 040693 206 DIVVAVQ-KS-GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVA 281 (382)
Q Consensus 206 ~~v~~~~-~~-g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a 281 (382)
+.||+.+ .. +.++.++.+ |+.+-..-.. ......+.++ +++.||++.. ..+.|..
T Consensus 171 g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~----~~~~PnGla~d~~~~~lY~aD~----------------~~~~I~~ 229 (349)
T 3v64_C 171 GTIYWTDWGNTPRIEASSMD-GSGRRIIADT----HLFWPNGLTIDYAGRRMYWVDA----------------KHHVIER 229 (349)
T ss_dssp TEEEEEECSSSCEEEEEETT-SCSCEESCCS----SCSCEEEEEEETTTTEEEEEET----------------TTTEEEE
T ss_pred CeEEEeccCCCCEEEEEeCC-CCCcEEEEEC----CCCCcceEEEeCCCCEEEEEEC----------------CCCEEEE
Confidence 3444443 33 667777765 4332221100 0111223444 4788999742 3467999
Q ss_pred EECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEec
Q 040693 282 MDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDT 339 (382)
Q Consensus 282 ~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~ 339 (382)
+|.......--..... .....+.+.++.+|++.. ..+.|..+|..+|+.+-.+..
T Consensus 230 ~~~dG~~~~~~~~~~~--~~P~giav~~~~ly~td~-~~~~V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 230 ANLDGSHRKAVISQGL--PHPFAITVFEDSLYWTDW-HTKSINSANKFTGKNQEIIRN 284 (349)
T ss_dssp EETTSCSCEEEECSSC--SSEEEEEEETTEEEEEET-TTTEEEEEETTTCCSCEEEEC
T ss_pred EeCCCCceEEEEeCCC--CCceEEEEECCEEEEecC-CCCeEEEEEccCCCccEEecc
Confidence 9976433222222211 122334557889999875 678999999888887666654
No 267
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.64 E-value=0.07 Score=54.61 Aligned_cols=55 Identities=7% Similarity=0.004 Sum_probs=37.9
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|+.+|.++|+.+....+... ...+.+.+++..|++...
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l~~~--------------~~~~~~SPDG~~la~~~~------------------------- 129 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNELPRP--------------IQYLCWSPVGSKLAYVYQ------------------------- 129 (719)
T ss_dssp EEEEEEEETTTTEECCSSCCCSS--------------BCCEEECSSTTCEEEEET-------------------------
T ss_pred ceEEEEEECCCCccccceecCcc--------------cccceECCCCCEEEEEEC-------------------------
Confidence 57899999999987543333110 135778888877777542
Q ss_pred CCCCCCCCcceEEEEECCCCcEE
Q 040693 134 KCIEPENHSNSLLALDLDTGKIV 156 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~ 156 (382)
+.|+.+|..+|+.+
T Consensus 130 ---------~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 130 ---------NNIYLKQRPGDPPF 143 (719)
T ss_dssp ---------TEEEEESSTTSCCE
T ss_pred ---------CeEEEEeCCCCCcE
Confidence 68999999888764
No 268
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.64 E-value=0.11 Score=47.47 Aligned_cols=136 Identities=13% Similarity=0.084 Sum_probs=63.7
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCC-CceEEEEECCCCcEEee
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTI-AGGWVAMDASNGNVLWS 292 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~g~v~a~d~~tG~~~W~ 292 (382)
...|+.+|..+|+.+-.... + ......|.+ ++ ++|+...... . + ... ...|+.+| +|+..--
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~sp--dg-~~~~~~~~~~-~-----~---~~~~~~~l~~~d--~~~~~~l 213 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK-P--RFSSGIWHR--DK-IVVNVPHREI-I-----P---QYFKFWDIYIWE--DGKEEKM 213 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE-E--TTCEEEEET--TE-EEEEEECCCS-S-----C---CSSCCEEEEEEE--TTEEEEE
T ss_pred cceEEEEECCCCeEEeeecC-C--CcccccCCC--Ce-EEEEEecccc-c-----c---cccccccEEEeC--CCceEEe
Confidence 35799999999887333332 1 111122221 33 5554422100 0 0 001 35688888 7765433
Q ss_pred ecCCCCCCCCcceEEeCCEEEEeeecC------CCcEEEEeCCCCcEeEEEecCCceecc-eEEeCCEEEEEeCceeEee
Q 040693 293 TADPSNGTAPGPVTVANGVLFGGSTYR------QGPIYAMDVKTGKILWSYDTGATIYGG-ASVSNGCIYMGNGYKVTVG 365 (382)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~v~~~~~~~------~g~l~~ld~~tG~ilw~~~~~~~~~~~-p~~~~g~lyv~~~~g~~~~ 365 (382)
... . . ...+.-++..+++.+... ...|+.+| +|+..--.......... +...++ +|+....+....
T Consensus 214 ~~~-~-~--~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg-~~~~~~~~~~~~ 286 (347)
T 2gop_A 214 FEK-V-S--FYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGK-VYFTLFEEGSVN 286 (347)
T ss_dssp EEE-E-S--EEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTE-EEEEEEETTEEE
T ss_pred ccC-c-c--eeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCc-EEEEEecCCcEE
Confidence 332 1 1 112233445454444211 34799999 56643211111122333 555555 666555444567
Q ss_pred cCCccCCCCCe
Q 040693 366 FGNKNFTSGTS 376 (382)
Q Consensus 366 ~~~~~~~~g~~ 376 (382)
+| ++ +|+.
T Consensus 287 l~-~~--~g~~ 294 (347)
T 2gop_A 287 LY-IW--DGEI 294 (347)
T ss_dssp EE-EE--SSSE
T ss_pred EE-Ec--CCce
Confidence 78 77 3554
No 269
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.62 E-value=0.17 Score=51.47 Aligned_cols=79 Identities=13% Similarity=0.035 Sum_probs=44.1
Q ss_pred eEEEEECCCCcEEeee----cCCCCCCCCcceEEeCCEEEEeeecC----------CCcEEEEeCCCCcEeEEEecC--C
Q 040693 278 GWVAMDASNGNVLWST----ADPSNGTAPGPVTVANGVLFGGSTYR----------QGPIYAMDVKTGKILWSYDTG--A 341 (382)
Q Consensus 278 ~v~a~d~~tG~~~W~~----~~~~~~~~~~~~~~~~~~v~~~~~~~----------~g~l~~ld~~tG~ilw~~~~~--~ 341 (382)
.+..+|+.+.+ |+. .++..+.....+.+.++.||+..... ...+.++|+++. .|+.-.+ .
T Consensus 433 ~v~~yd~~~~~--W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~--~W~~~~~~~~ 508 (656)
T 1k3i_A 433 IITLGEPGTSP--NTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD--TFYKQNPNSI 508 (656)
T ss_dssp EEECCSTTSCC--EEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT--EEEECCCCSS
T ss_pred EEEcCCCCCCC--eeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC--ceeecCCCCC
Confidence 57788888775 553 33443333343444466666644211 145889999865 4765221 1
Q ss_pred -ceecceEEe--CCEEEEEeCc
Q 040693 342 -TIYGGASVS--NGCIYMGNGY 360 (382)
Q Consensus 342 -~~~~~p~~~--~g~lyv~~~~ 360 (382)
....+.++. +++||+..+.
T Consensus 509 ~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 509 VRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCTTEEEEECTTSCEEEEECC
T ss_pred ccccccHhhcCCCcEEEecCCC
Confidence 122333444 9999998763
No 270
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.57 E-value=0.053 Score=54.87 Aligned_cols=98 Identities=12% Similarity=0.011 Sum_probs=53.5
Q ss_pred eEEEEECCCCcEEeeecCCCCC---CC---CcceEE-eCC-EEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecce-E
Q 040693 278 GWVAMDASNGNVLWSTADPSNG---TA---PGPVTV-ANG-VLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGA-S 348 (382)
Q Consensus 278 ~v~a~d~~tG~~~W~~~~~~~~---~~---~~~~~~-~~~-~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p-~ 348 (382)
+|+.+|+++|+..-........ .+ ...+.+ .++ ++|.... ....|+.+|.++|+ +-++.......... .
T Consensus 266 ~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s 343 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLT 343 (662)
T ss_dssp EEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEE
T ss_pred EEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEe
Confidence 7999999888765333322110 01 122333 244 5555442 34568888988776 34444333333333 4
Q ss_pred EeCCEEEEEe-CceeEeecCCccCCCCCeE
Q 040693 349 VSNGCIYMGN-GYKVTVGFGNKNFTSGTSL 377 (382)
Q Consensus 349 ~~~g~lyv~~-~~g~~~~~~~~~~~~g~~l 377 (382)
..++++++.. +......+|.++..+|+..
T Consensus 344 ~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 344 VSGTRAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp EETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred cCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence 5666666543 3334456777887777754
No 271
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.11 Score=55.12 Aligned_cols=108 Identities=9% Similarity=0.048 Sum_probs=68.5
Q ss_pred cEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 206 DIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
..|++++.|+.+..+|..+|+.+..+.... ....... ++..++++ ..++.|..+|
T Consensus 70 ~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~------~V~~v~~sp~g~~l~sg-----------------s~dg~V~lwd 126 (902)
T 2oaj_A 70 IYLVVINAKDTVYVLSLYSQKVLTTVFVPG------KITSIDTDASLDWMLIG-----------------LQNGSMIVYD 126 (902)
T ss_dssp TEEEEEETTCEEEEEETTTCSEEEEEECSS------CEEEEECCTTCSEEEEE-----------------ETTSCEEEEE
T ss_pred CEEEEEECcCeEEEEECCCCcEEEEEcCCC------CEEEEEECCCCCEEEEE-----------------cCCCcEEEEE
Confidence 478888899999999999999887775321 1222222 56677776 3458899999
Q ss_pred CCCCcEE-eee-------cCCCC-CCCCcceEEeC---CEEEEeeecCCCcEEEEeCCCCcEeEEEec
Q 040693 284 ASNGNVL-WST-------ADPSN-GTAPGPVTVAN---GVLFGGSTYRQGPIYAMDVKTGKILWSYDT 339 (382)
Q Consensus 284 ~~tG~~~-W~~-------~~~~~-~~~~~~~~~~~---~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~ 339 (382)
+++++.. ++. ..... ......+.+.. +.++++. .++.+ ..|.++++.+-.+..
T Consensus 127 ~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~--~dg~v-lWd~~~~~~~~~~~~ 191 (902)
T 2oaj_A 127 IDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY--EYVTL-TYSLVENEIKQSFIY 191 (902)
T ss_dssp TTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC--SSCEE-EEETTTTEEEEEECC
T ss_pred CCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe--CCCcE-EEECCCCceEEEEec
Confidence 9999864 221 11110 01112233322 3555555 48888 999999998877653
No 272
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.53 E-value=0.075 Score=54.24 Aligned_cols=68 Identities=10% Similarity=0.004 Sum_probs=42.5
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|+.+|+++|+..-........ . ....++.+.+++..|+++....
T Consensus 36 dg~i~~~d~~~g~~~~~~~~~~~~--------~--~~v~~~~~SpDg~~l~~~~~~~----------------------- 82 (723)
T 1xfd_A 36 KGTVRLWNVETNTSTVLIEGKKIE--------S--LRAIRYEISPDREYALFSYNVE----------------------- 82 (723)
T ss_dssp SSCEEEBCGGGCCCEEEECTTTTT--------T--TTCSEEEECTTSSEEEEEESCC-----------------------
T ss_pred CCCEEEEECCCCcEEEEecccccc--------c--cccceEEECCCCCEEEEEecCc-----------------------
Confidence 788999999999886554321100 0 0013577888888777765431
Q ss_pred CCCCCCCCcceEEEEECCCCcE
Q 040693 134 KCIEPENHSNSLLALDLDTGKI 155 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~ 155 (382)
........+.++.+|.++|+.
T Consensus 83 -~~~~~~~~~~i~~~d~~~~~~ 103 (723)
T 1xfd_A 83 -PIYQHSYTGYYVLSKIPHGDP 103 (723)
T ss_dssp -CCSSSCCCSEEEEEESSSCCC
T ss_pred -cceeecceeeEEEEECCCCce
Confidence 011122348899999999886
No 273
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.52 E-value=1 Score=47.07 Aligned_cols=110 Identities=15% Similarity=0.057 Sum_probs=61.2
Q ss_pred cEEEEEc-cC-cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeee--CCeEEEEecCccccccccCCCCCCCCCceEEE
Q 040693 206 DIVVAVQ-KS-GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATD--ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVA 281 (382)
Q Consensus 206 ~~v~~~~-~~-g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a 281 (382)
+.||+.. .. +.|..++.+ |+.+-.+-.. ......+.+++ ++.||++.. ....|..
T Consensus 526 g~LYwtD~g~~~~I~~~~~d-G~~~~~lv~~----~l~~P~GLavD~~~~~LYwaD~----------------~~~~I~~ 584 (791)
T 3m0c_C 526 GFMYWTDWGTPAKIKKGGLN-GVDIYSLVTE----NIQWPNGITLDLLSGRLYWVDS----------------KLHSISS 584 (791)
T ss_dssp TEEEEEECSSSCEEEEEETT-SCCEEEEECS----SCSCEEEEEEETTTTEEEEEET----------------TTTEEEE
T ss_pred CCEEEecCCCCCeEEEEecC-CCceEEEEeC----CCCCceEEEEecCCCeEEEEeC----------------CCCcEEE
Confidence 4555554 22 566666665 4433222110 00122334444 788998732 2467889
Q ss_pred EECCCCcEEeeec-CCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEe
Q 040693 282 MDASNGNVLWSTA-DPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYD 338 (382)
Q Consensus 282 ~d~~tG~~~W~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~ 338 (382)
+|+. |+.+..+- ........-.+.+.++.||++.. ..+.|+.+|..+|+.+-.+.
T Consensus 585 ~d~d-G~~~~~v~~~~~~l~~P~glav~~~~lYwtD~-~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 585 IDVN-GGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI-INEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp EETT-SCSCEEEEECTTTTSSEEEEEEETTEEEEEET-TTTEEEEEETTTCCCCEEEE
T ss_pred EecC-CCceEEEecCCCccCCCCEEEEeCCEEEEEEC-CCCEEEEEeCCCCcceEEee
Confidence 9975 44333332 21111122244566889999875 67899999998997766554
No 274
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.40 E-value=0.31 Score=45.26 Aligned_cols=126 Identities=11% Similarity=0.079 Sum_probs=69.5
Q ss_pred CcEEEEEeCC---CCCeeeeeccCCCCCC-----CCcc--cc-eee-eCCeEEEEecCccccccccCCCCCCCCC-ceEE
Q 040693 214 SGFAWALDRD---SGSLIWSMEAGPGGLG-----GGAM--WG-AAT-DERRIYTNIANSQHKNFNLKPSKNSTIA-GGWV 280 (382)
Q Consensus 214 ~g~l~ald~~---tG~~~W~~~~~~~~~~-----g~~~--~~-~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~-g~v~ 280 (382)
+..|.++|.. ||+.+|..++...... +... .. .++ .++.+|++.. .. +.|+
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s----------------~~~~~I~ 162 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFA----------------LGMPAIA 162 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEE----------------ESSCEEE
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCC----------------CCCCeEE
Confidence 5789999999 9999999986421000 0011 11 222 4678998632 34 6788
Q ss_pred EEECCCCc-EEeeecCCCC--CC-CCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEeEEEecC--C------ceec-c
Q 040693 281 AMDASNGN-VLWSTADPSN--GT-APGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTG--A------TIYG-G 346 (382)
Q Consensus 281 a~d~~tG~-~~W~~~~~~~--~~-~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~--~------~~~~-~ 346 (382)
.+++..-+ ..|-.+.+.. .. ..+-.... +.++++... .|+|++||.++ ...|.++.. + ..-. .
T Consensus 163 rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~--~g~L~~fD~~~-pv~~~v~~~~~G~~~~~~~~dgil 239 (334)
T 2p9w_A 163 RVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG--PRALTAFDVSK-PYAWPEPVKINGDFGTLSGTEKIV 239 (334)
T ss_dssp EECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS--SSSEEEEECSS-SSCCCEECEESSCCCCCTTEEEEE
T ss_pred EEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC--CCeEEEEcCCC-CcceeecccccCCcccccCccccc
Confidence 88876332 3365443221 11 12222232 446666653 89999999884 334445442 1 0111 3
Q ss_pred eEEeCCEE-EEEe
Q 040693 347 ASVSNGCI-YMGN 358 (382)
Q Consensus 347 p~~~~g~l-yv~~ 358 (382)
|.-.+|++ +|++
T Consensus 240 p~~~~G~vllV~~ 252 (334)
T 2p9w_A 240 TVPVGNESVLVGA 252 (334)
T ss_dssp EEEETTEEEEEEE
T ss_pred ccccCCEEEEEEc
Confidence 44477777 5554
No 275
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.35 E-value=0.21 Score=49.67 Aligned_cols=135 Identities=15% Similarity=0.112 Sum_probs=71.1
Q ss_pred cEEEEEccC----cEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCc--
Q 040693 206 DIVVAVQKS----GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAG-- 277 (382)
Q Consensus 206 ~~v~~~~~~----g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g-- 277 (382)
..|+....+ ..++.+|.++|+..- ..... .....+.. |+..|+.+ ...+
T Consensus 162 ~~la~~~~~~~~~~~i~~~d~~~g~~~~-l~~~~-----~~~~~~~~SpDG~~l~~~-----------------~~~~~~ 218 (582)
T 3o4h_A 162 DLIAGLGFFGGGRVSLFTSNLSSGGLRV-FDSGE-----GSFSSASISPGMKVTAGL-----------------ETAREA 218 (582)
T ss_dssp TEEEEEEEEETTEEEEEEEETTTCCCEE-ECCSS-----CEEEEEEECTTSCEEEEE-----------------ECSSCE
T ss_pred CEEEEEEEcCCCCeEEEEEcCCCCCceE-eecCC-----CccccceECCCCCEEEEc-----------------cCCCee
Confidence 445444433 679999999998762 22111 12233333 56666633 1224
Q ss_pred eEEEEECCCCcEEeeecCCCCCCCCcce--------EEeCC-EEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceE
Q 040693 278 GWVAMDASNGNVLWSTADPSNGTAPGPV--------TVANG-VLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGAS 348 (382)
Q Consensus 278 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~--------~~~~~-~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~ 348 (382)
.|+.+|+.+|+.. ........ ...+. ...++ +++..+ .++.+..++. |+.+- ...+...++.
T Consensus 219 ~i~~~d~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~spdg~~~~~~~--~~g~~~l~~~--g~~~~---~~~~~v~~~~ 289 (582)
T 3o4h_A 219 RLVTVDPRDGSVE-DLELPSKD-FSSYRPTAITWLGYLPDGRLAVVAR--REGRSAVFID--GERVE---APQGNHGRVV 289 (582)
T ss_dssp EEEEECTTTCCEE-ECCCSCSH-HHHHCCSEEEEEEECTTSCEEEEEE--ETTEEEEEET--TEEEC---CCSSEEEEEE
T ss_pred EEEEEcCCCCcEE-EccCCCcC-hhhhhhccccceeEcCCCcEEEEEE--cCCcEEEEEE--CCeec---cCCCceEEEE
Confidence 7999999999988 44332211 11111 22344 444444 4788877777 76543 2223333444
Q ss_pred EeCCEEEEEeC-ceeEeecCCccCC
Q 040693 349 VSNGCIYMGNG-YKVTVGFGNKNFT 372 (382)
Q Consensus 349 ~~~g~lyv~~~-~g~~~~~~~~~~~ 372 (382)
+.++++++..+ ...-..+|.++..
T Consensus 290 ~sdg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 290 LWRGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EETTEEEEEEEETTEEEEEEEETTC
T ss_pred ecCCEEEEEEcCCCCCCeEEEEcCC
Confidence 45777766533 3333445555543
No 276
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.31 E-value=0.72 Score=43.19 Aligned_cols=151 Identities=12% Similarity=0.072 Sum_probs=72.6
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
++.|...|++||+.+..+...........+..+ . +....++....+. ....+..+..|+.+..+|
T Consensus 202 D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf-S-------------pdG~~lvs~s~~~-~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 202 MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY-S-------------EMGLLFIVLSHPC-AKESESLRSPVFQLIVIN 266 (356)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---CCCEEEEE-E-------------ETTEEEEEEC-------------CCEEEEEEE
T ss_pred CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE-C-------------CCCCEEEEeccCC-CcceeeccCCCcEEEEEE
Confidence 589999999999999998643221100000000 0 0011111110000 012345567788999999
Q ss_pred CCCCCeeeeeccC-CCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCC
Q 040693 222 RDSGSLIWSMEAG-PGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGT 300 (382)
Q Consensus 222 ~~tG~~~W~~~~~-~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~ 300 (382)
.++|+.+-..... +.+-.+ ........+..+..+ ..+++|...|+++|+.+-+........
T Consensus 267 ~~tgk~l~v~~~~~p~Gh~~-~~lsg~~sg~~lASg-----------------S~DgTIkIWDl~tGk~l~tL~gH~~~v 328 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQAG-RFLEGDVKDHCAAAI-----------------LTSGTIAIWDLLLGQCTALLPPVSDQH 328 (356)
T ss_dssp TTTTEEEEEEEECCCTTCCC-CEEEEEEETTEEEEE-----------------ETTSCEEEEETTTCSEEEEECCC--CC
T ss_pred CCCCEEEEEEEeeccCCCcc-eeEccccCCCEEEEE-----------------cCCCcEEEEECCCCcEEEEecCCCCCe
Confidence 9999876543211 100001 111111122223322 345889999999999988876433211
Q ss_pred CCcceEE--eCCEEEEeeecCCCcEEEEeC
Q 040693 301 APGPVTV--ANGVLFGGSTYRQGPIYAMDV 328 (382)
Q Consensus 301 ~~~~~~~--~~~~v~~~~~~~~g~l~~ld~ 328 (382)
...+.+ ++.+++.++ .++.|...|.
T Consensus 329 -vs~vafSPDG~~LaSGS--~D~TIklWd~ 355 (356)
T 2w18_A 329 -WSFVKWSGTDSHLLAGQ--KDGNIFVYHY 355 (356)
T ss_dssp -CCEEEECSSSSEEEEEC--TTSCEEEEEE
T ss_pred -EEEEEECCCCCEEEEEE--CCCcEEEecC
Confidence 122223 345666666 4788876663
No 277
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.30 E-value=0.25 Score=49.89 Aligned_cols=144 Identities=15% Similarity=0.088 Sum_probs=69.8
Q ss_pred cEEEEEeCCC------CCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECC-
Q 040693 215 GFAWALDRDS------GSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS- 285 (382)
Q Consensus 215 g~l~ald~~t------G~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~- 285 (382)
..|+.+|.++ |+..--..... .....+.. |+..|++........ ......|+.+|+.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~SpDG~~la~~~~~~~~~---------~~~~~~i~~~d~~~ 226 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAH-----RFVTGPRLSPDGRQAVWLAWDHPRM---------PWEGTELKTARVTE 226 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCS-----SEECCCEECTTSSEEEEEEECTTCC---------TTTCEEEEEEEECT
T ss_pred eEEEEEECCCCccccCCceeEEEecCC-----CcccCceECCCCCEEEEEECCCCCC---------CCCCcEEEEEEECC
Confidence 5799999988 55432210111 11222222 666666554321100 0123579999999
Q ss_pred CC---cEEeeecCCCCCCCCcceEEeCCEEEEeeecCCC--cEEEEeCCCCcEeEEEecCCce--------ecceEE-eC
Q 040693 286 NG---NVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQG--PIYAMDVKTGKILWSYDTGATI--------YGGASV-SN 351 (382)
Q Consensus 286 tG---~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g--~l~~ld~~tG~ilw~~~~~~~~--------~~~p~~-~~ 351 (382)
+| +..-....... ....+....++.+++.+. .++ .|+.+|.++|+..--....... .....+ .+
T Consensus 227 ~g~~~~~~~l~~~~~~-~~~~~~~spdg~l~~~~~-~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~ 304 (662)
T 3azo_A 227 DGRFADTRTLLGGPEE-AIAQAEWAPDGSLIVATD-RTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLAN 304 (662)
T ss_dssp TSCEEEEEEEEEETTB-CEEEEEECTTSCEEEEEC-TTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTT
T ss_pred CCcccccEEeCCCCCc-eEcceEECCCCeEEEEEC-CCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCC
Confidence 68 33322221111 111222222443444442 355 7999998888753221111111 112333 36
Q ss_pred CEEEEEeCceeEeecCCccCCCCC
Q 040693 352 GCIYMGNGYKVTVGFGNKNFTSGT 375 (382)
Q Consensus 352 g~lyv~~~~g~~~~~~~~~~~~g~ 375 (382)
+++++.... ....+|.++..+|+
T Consensus 305 ~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 305 GLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp SCEEEEEBS-SSCEEEEEETTTTE
T ss_pred CEEEEEEEc-CccEEEEEECCCCc
Confidence 777776655 55667777766554
No 278
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.29 E-value=1.2 Score=45.77 Aligned_cols=96 Identities=8% Similarity=-0.048 Sum_probs=52.3
Q ss_pred CceEEEEECCCCcEE-eeecCCCCCCCCcceEEeCCEEEEeeec--CCCcEEEEeCCCCcEeEEEecCC--ceecceEEe
Q 040693 276 AGGWVAMDASNGNVL-WSTADPSNGTAPGPVTVANGVLFGGSTY--RQGPIYAMDVKTGKILWSYDTGA--TIYGGASVS 350 (382)
Q Consensus 276 ~g~v~a~d~~tG~~~-W~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~g~l~~ld~~tG~ilw~~~~~~--~~~~~p~~~ 350 (382)
...|+.+|+.+|+.. |+.-.........++.-+++.+|+.+.. ..+.|+.+|.++++..|+.-++. .........
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~ 372 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA 372 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE
Confidence 457999999988433 3322211111233344467777777641 14569999998753234332222 233444556
Q ss_pred CCEEEEEeCceeEeecCCccC
Q 040693 351 NGCIYMGNGYKVTVGFGNKNF 371 (382)
Q Consensus 351 ~g~lyv~~~~g~~~~~~~~~~ 371 (382)
+++|++....+....++.++.
T Consensus 373 ~~~lv~~~~~dg~~~l~~~~~ 393 (741)
T 1yr2_A 373 GNRLFASYIHDAKSQVLAFDL 393 (741)
T ss_dssp BTEEEEEEEETTEEEEEEEET
T ss_pred CCEEEEEEEECCEEEEEEEeC
Confidence 778777765444444554443
No 279
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.25 E-value=0.51 Score=43.37 Aligned_cols=23 Identities=9% Similarity=0.318 Sum_probs=18.6
Q ss_pred ecEEEEEccCcEEEEEeCCCCCe
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSL 227 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~ 227 (382)
+..|++++.|+.+..+|..+++.
T Consensus 117 ~~~l~s~s~D~~v~iwd~~~~~~ 139 (345)
T 3fm0_A 117 GNLLATCSRDKSVWVWEVDEEDE 139 (345)
T ss_dssp SSEEEEEETTSCEEEEEECTTSC
T ss_pred CCEEEEEECCCeEEEEECCCCCC
Confidence 46788888899999999887753
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.19 E-value=0.41 Score=46.08 Aligned_cols=51 Identities=10% Similarity=0.163 Sum_probs=31.6
Q ss_pred CEEEEeeecCCCcEEEEeCCCCcEeEEEecC-----C---c------eecce---EEe--CCEEEEEeCcee
Q 040693 310 GVLFGGSTYRQGPIYAMDVKTGKILWSYDTG-----A---T------IYGGA---SVS--NGCIYMGNGYKV 362 (382)
Q Consensus 310 ~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~-----~---~------~~~~p---~~~--~g~lyv~~~~g~ 362 (382)
+.+|++.. ..++|..||+ +|++.-..-.+ + + .+..| ++. ++.|||+.....
T Consensus 352 g~lyvaD~-~n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~ 421 (430)
T 3tc9_A 352 YDFYFCDR-ENHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENR 421 (430)
T ss_dssp EEEEEEEG-GGTEEEEECT-TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGT
T ss_pred CeEEEEEC-CCcEEEEECC-CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCC
Confidence 68888875 5678999995 58765544321 0 0 12233 344 589999976533
No 281
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.17 E-value=0.71 Score=42.11 Aligned_cols=104 Identities=10% Similarity=0.124 Sum_probs=52.9
Q ss_pred ecEEEEEccCcEEEEEeCCCC--CeeeeeccCCCCCCCCcccceee--e--CCeEEEEecCccccccccCCCCCCCCCce
Q 040693 205 HDIVVAVQKSGFAWALDRDSG--SLIWSMEAGPGGLGGGAMWGAAT--D--ERRIYTNIANSQHKNFNLKPSKNSTIAGG 278 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG--~~~W~~~~~~~~~~g~~~~~~~~--~--~~~v~~~~~~~~~~~~~~~~~~~~~~~g~ 278 (382)
+..|++++.|+.+..+|..++ +.+-.+..- ....+.... + ...+..+ ..++.
T Consensus 165 ~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~~l~s~-----------------s~D~~ 222 (330)
T 2hes_X 165 EALLASSSYDDTVRIWKDYDDDWECVAVLNGH-----EGTVWSSDFDKTEGVFRLCSG-----------------SDDST 222 (330)
T ss_dssp SSEEEEEETTSCEEEEEEETTEEEEEEEECCC-----SSCEEEEEECCSSSSCEEEEE-----------------ETTSC
T ss_pred CCEEEEEcCCCeEEEEECCCCCeeEEEEccCC-----CCcEEEEEecCCCCeeEEEEE-----------------eCCCe
Confidence 457888888998888887665 233322211 112222222 1 1233333 23467
Q ss_pred EEEEECCCC----cEEeeec--CCC-CCCCCcceEE-eCCEEEEeeecCCCcEEEEeCCCCc
Q 040693 279 WVAMDASNG----NVLWSTA--DPS-NGTAPGPVTV-ANGVLFGGSTYRQGPIYAMDVKTGK 332 (382)
Q Consensus 279 v~a~d~~tG----~~~W~~~--~~~-~~~~~~~~~~-~~~~v~~~~~~~~g~l~~ld~~tG~ 332 (382)
|..+|..++ +..|... ... -......+.. .+++++.++ .++.|..+|..+|+
T Consensus 223 v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~--~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 223 VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVG--ADGVLAVYEEVDGE 282 (330)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEE--TTSCEEEEEEETTE
T ss_pred EEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEe--CCCEEEEEEcCCCc
Confidence 777777654 3344322 111 0001112222 245566666 48999999988774
No 282
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.14 E-value=0.39 Score=43.09 Aligned_cols=22 Identities=14% Similarity=0.244 Sum_probs=18.6
Q ss_pred ecEEEEEccCcEEEEEeCCCCC
Q 040693 205 HDIVVAVQKSGFAWALDRDSGS 226 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~ 226 (382)
+..|+.++.|+.+..+|..+|+
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGR 88 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSC
T ss_pred CCEEEEEcCCCEEEEEEcCCCc
Confidence 4678888999999999998875
No 283
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.14 E-value=0.78 Score=41.93 Aligned_cols=111 Identities=15% Similarity=0.050 Sum_probs=62.0
Q ss_pred cEEEEEcc-C-cEEEEEeCCCCCeeeeeccCCCCCCCCcccceeee--CCeEEEEecCccccccccCCCCCCCCCceEEE
Q 040693 206 DIVVAVQK-S-GFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATD--ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVA 281 (382)
Q Consensus 206 ~~v~~~~~-~-g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a 281 (382)
+.||+... . +.|+.++.+ |+..-.+-... .....+.+++ ++.||+... ..+.|..
T Consensus 132 g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~----~~~P~gla~d~~~~~lY~~D~----------------~~~~I~~ 190 (316)
T 1ijq_A 132 GFMYWTDWGTPAKIKKGGLN-GVDIYSLVTEN----IQWPNGITLDLLSGRLYWVDS----------------KLHSISS 190 (316)
T ss_dssp TEEEEEECSSSCEEEEEETT-SCCEEEEECSS----CSCEEEEEEETTTTEEEEEET----------------TTTEEEE
T ss_pred CEEEEEccCCCCeEEEEcCC-CCCeEEEEECC----CCCceEEEEeccCCEEEEEEC----------------CCCeEEE
Confidence 45555443 2 678888765 54432221110 1122233443 789998732 3467999
Q ss_pred EECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEe
Q 040693 282 MDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYD 338 (382)
Q Consensus 282 ~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~ 338 (382)
+|.......--............+.++++.+|++.. ..+.|+.+|..+|+.+-.+.
T Consensus 191 ~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~-~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 191 IDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI-INEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEET-TTTEEEEEETTTCCCCEEEE
T ss_pred EecCCCceEEEeecCCccCCcEEEEEECCEEEEEEC-CCCeEEEEeCCCCcceEEEe
Confidence 998643322111211111112234567889999874 67899999998898765554
No 284
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.11 E-value=0.12 Score=46.98 Aligned_cols=141 Identities=15% Similarity=0.133 Sum_probs=76.4
Q ss_pred EEEE-ccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEECC
Q 040693 208 VVAV-QKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS 285 (382)
Q Consensus 208 v~~~-~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~ 285 (382)
||+. ..++.|+.+|.++ +..-....+ ....+.++ .++.+|+.... .....|+.+|.+
T Consensus 45 lyv~d~~~~~I~~~d~~g-~~~~~~~~~------~~p~gia~~~dG~l~vad~~--------------~~~~~v~~~d~~ 103 (306)
T 2p4o_A 45 IFVTNHEVGEIVSITPDG-NQQIHATVE------GKVSGLAFTSNGDLVATGWN--------------ADSIPVVSLVKS 103 (306)
T ss_dssp EEEEETTTTEEEEECTTC-CEEEEEECS------SEEEEEEECTTSCEEEEEEC--------------TTSCEEEEEECT
T ss_pred EEEEeCCCCeEEEECCCC-ceEEEEeCC------CCceeEEEcCCCcEEEEecc--------------CCcceEEEEcCC
Confidence 4444 4678899999875 443333321 12223333 34567876422 112358899999
Q ss_pred CCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCc-EeEEEec------C-Cc--eecceEEeCCEEE
Q 040693 286 NGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGK-ILWSYDT------G-AT--IYGGASVSNGCIY 355 (382)
Q Consensus 286 tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~-ilw~~~~------~-~~--~~~~p~~~~g~ly 355 (382)
+|+.......+......+.....++.+|+... ..+.|+.+|..+++ .+|.... . .. .-......++.||
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~-~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~ly 182 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFLNGITPLSDTQYLTADS-YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLY 182 (306)
T ss_dssp TSCEEEEEECTTCSCEEEEEESSSSEEEEEET-TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEE
T ss_pred CCeEEEEEeCCCccccCcccccCCCcEEEEEC-CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEE
Confidence 99876554443211112222234567888763 47899999998764 2332211 0 11 1111233567899
Q ss_pred EEeCceeEeecCCcc
Q 040693 356 MGNGYKVTVGFGNKN 370 (382)
Q Consensus 356 v~~~~g~~~~~~~~~ 370 (382)
++......+..|.++
T Consensus 183 v~d~~~~~I~~~~~~ 197 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVD 197 (306)
T ss_dssp EEETTTTEEEEEEBC
T ss_pred EEeCCCCEEEEEEeC
Confidence 998765544445444
No 285
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.04 E-value=1.5 Score=44.42 Aligned_cols=144 Identities=12% Similarity=-0.069 Sum_probs=76.4
Q ss_pred cEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeee--CCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 206 DIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATD--ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
.+.++....+.+..++.+ |+..-..-.. ......+.+++ .+.+|++... ..+.|..++
T Consensus 93 ~LY~tD~~~~~I~v~~~d-G~~~~~l~~~----~l~~P~~iavdp~~G~lY~tD~g---------------~~~~I~r~~ 152 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLD-GQHRQVLVWK----DLDSPRALALDPAEGFMYWTEWG---------------GKPKIDRAA 152 (628)
T ss_dssp EEEEEETTTTEEEEEETT-STTCEEEECS----SCCCEEEEEEETTTTEEEEEECS---------------SSCEEEEEE
T ss_pred EEEEEECCCCEEEEEecC-CCcEEEEEeC----CCCCcccEEEccCCCeEEEeCCC---------------CCCEEEEEe
Confidence 333444556788888876 4322111100 00122344444 6889987422 135688877
Q ss_pred CCCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEeCCEEEEEeCce
Q 040693 284 ASNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVSNGCIYMGNGYK 361 (382)
Q Consensus 284 ~~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~~g~lyv~~~~g 361 (382)
.......--.. . ......++++ ++++|++.. ..+.|..+|.+.+.. --+......-...++.+++||++....
T Consensus 153 ~dG~~~~~l~~-~--~~~P~GlalD~~~~~LY~aD~-~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~~~ly~tD~~~ 227 (628)
T 4a0p_A 153 MDGSERTTLVP-N--VGRANGLTIDYAKRRLYWTDL-DTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQDYIYWTDWSR 227 (628)
T ss_dssp TTSCSCEEEEC-S--CSSEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSC-EEEEECCSCEEEEEEETTEEEEEETTT
T ss_pred CCCCceEEEEC-C--CCCcceEEEccccCEEEEEEC-CCCEEEEEcCCCCce-EEeeccCCCceEEEEECCEEEEecCCC
Confidence 75443221122 1 1122334555 689999875 568899999874332 111111122235567889999998643
Q ss_pred eEeecCCccCCCCCe
Q 040693 362 VTVGFGNKNFTSGTS 376 (382)
Q Consensus 362 ~~~~~~~~~~~~g~~ 376 (382)
.. ++.+|..+|+.
T Consensus 228 ~~--I~~~dk~tg~~ 240 (628)
T 4a0p_A 228 RS--IERANKTSGQN 240 (628)
T ss_dssp TE--EEEEETTTCCS
T ss_pred CE--EEEEECCCCCc
Confidence 32 35566666653
No 286
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.03 E-value=0.56 Score=50.41 Aligned_cols=128 Identities=11% Similarity=0.039 Sum_probs=67.4
Q ss_pred cEEEEEccCcEEE-EEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 206 DIVVAVQKSGFAW-ALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 206 ~~v~~~~~~g~l~-ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
..++....+..++ .+|..+++..-- . .. ......+.+ ++..|++. ...+.|+.+
T Consensus 349 ~~l~~~s~~~~l~~~~d~~~~~~~~l-~-~~----~~~~~~~~~SpDG~~la~~-----------------~~~~~v~~~ 405 (1045)
T 1k32_A 349 VAFIHGTREGDFLGIYDYRTGKAEKF-E-EN----LGNVFAMGVDRNGKFAVVA-----------------NDRFEIMTV 405 (1045)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEC-C-CC----CCSEEEEEECTTSSEEEEE-----------------ETTSEEEEE
T ss_pred CeEEEEECCCceEEEEECCCCCceEe-c-CC----ccceeeeEECCCCCEEEEE-----------------CCCCeEEEE
Confidence 3444444477888 899988765322 2 11 012222222 55666554 234689999
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecC--------CCcEEEEeCCCCcEeEEEecCCceecceEE--e
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYR--------QGPIYAMDVKTGKILWSYDTGATIYGGASV--S 350 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~--------~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~--~ 350 (382)
|+++|+..-......... ..+.. ++..+....... .+.|+.+|.++|+ +.+..........+.. .
T Consensus 406 d~~tg~~~~~~~~~~~~v--~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spd 482 (1045)
T 1k32_A 406 DLETGKPTVIERSREAMI--TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDAD 482 (1045)
T ss_dssp ETTTCCEEEEEECSSSCC--CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTT
T ss_pred ECCCCceEEeccCCCCCc--cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCC
Confidence 999999876664332211 22223 334454443201 2489999999887 3333222222233433 3
Q ss_pred CCEEEEEeC
Q 040693 351 NGCIYMGNG 359 (382)
Q Consensus 351 ~g~lyv~~~ 359 (382)
+.+||+.+.
T Consensus 483 G~~l~~~s~ 491 (1045)
T 1k32_A 483 SKNLYYLSY 491 (1045)
T ss_dssp SCEEEEEES
T ss_pred CCEEEEEec
Confidence 445666655
No 287
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.01 E-value=0.54 Score=48.39 Aligned_cols=82 Identities=10% Similarity=0.150 Sum_probs=40.2
Q ss_pred ceEEEEECCCCcEEeeec--------CCCCCCC----CcceEEeC-CEEE-EeeecCC--CcEEEEeCCCCcEeEEEecC
Q 040693 277 GGWVAMDASNGNVLWSTA--------DPSNGTA----PGPVTVAN-GVLF-GGSTYRQ--GPIYAMDVKTGKILWSYDTG 340 (382)
Q Consensus 277 g~v~a~d~~tG~~~W~~~--------~~~~~~~----~~~~~~~~-~~v~-~~~~~~~--g~l~~ld~~tG~ilw~~~~~ 340 (382)
..|..+|+++|+..|... ....... ..+....+ ..++ ..+. ++ ..|+.+|.++++... ...+
T Consensus 285 ~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~-~~G~~~l~~~~~~~~~~~~-lT~g 362 (740)
T 4a5s_A 285 SVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISN-EEGYRHICYFQIDKKDCTF-ITKG 362 (740)
T ss_dssp EEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEEC-TTSCEEEEEEETTCSSCEE-SCCS
T ss_pred EEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEc-CCCceEEEEEECCCCceEe-cccC
Confidence 469999999998333211 1111111 13332334 3433 4442 23 469999998776542 2222
Q ss_pred C-ceecceEEeCCEEEEEeCc
Q 040693 341 A-TIYGGASVSNGCIYMGNGY 360 (382)
Q Consensus 341 ~-~~~~~p~~~~g~lyv~~~~ 360 (382)
. .+.......+++||..+..
T Consensus 363 ~~~v~~~~~~d~~~i~f~~~~ 383 (740)
T 4a5s_A 363 TWEVIGIEALTSDYLYYISNE 383 (740)
T ss_dssp SSCEEEEEEECSSEEEEEESC
T ss_pred CEEEEEEEEEeCCEEEEEEec
Confidence 1 1222222446677776554
No 288
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.00 E-value=0.75 Score=41.94 Aligned_cols=20 Identities=10% Similarity=0.290 Sum_probs=16.2
Q ss_pred ecEEEEEccCcEEEEEeCCC
Q 040693 205 HDIVVAVQKSGFAWALDRDS 224 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~t 224 (382)
+..|++++.|+.+..+|..+
T Consensus 119 g~~las~s~D~~v~iwd~~~ 138 (330)
T 2hes_X 119 GYYLATCSRDKSVWIWETDE 138 (330)
T ss_dssp SCEEEEEETTSCEEEEECCT
T ss_pred CCEEEEEeCCCEEEEEeccC
Confidence 35788888899999999853
No 289
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.72 E-value=1.1 Score=40.14 Aligned_cols=94 Identities=10% Similarity=-0.006 Sum_probs=46.1
Q ss_pred CCceEEEEECCCCcEEeeec--CCCCCCCCcceEEe-C----CEEEEeeecCCCcEEEEeCCCCcEeEEEecC--C---c
Q 040693 275 IAGGWVAMDASNGNVLWSTA--DPSNGTAPGPVTVA-N----GVLFGGSTYRQGPIYAMDVKTGKILWSYDTG--A---T 342 (382)
Q Consensus 275 ~~g~v~a~d~~tG~~~W~~~--~~~~~~~~~~~~~~-~----~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~--~---~ 342 (382)
.++.|..+|.++++..|... +..-......+.+. + .++..++ .++.|...|.++++..|+...- . .
T Consensus 178 ~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s--~D~~v~iWd~~~~~~~~~~~~~~~~~~~~ 255 (297)
T 2pm7_B 178 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS--QDRTCIIWTQDNEQGPWKKTLLKEEKFPD 255 (297)
T ss_dssp TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--TTSCEEEEEESSTTSCCEEEESSSSCCSS
T ss_pred CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE--CCCcEEEEEeCCCCCccceeeeecccCCC
Confidence 45789999998887444321 21100111222222 2 2344444 5899999998876544433221 1 1
Q ss_pred eecceEE-eCCEEEE-EeCceeEeecCCccC
Q 040693 343 IYGGASV-SNGCIYM-GNGYKVTVGFGNKNF 371 (382)
Q Consensus 343 ~~~~p~~-~~g~lyv-~~~~g~~~~~~~~~~ 371 (382)
....... .++++++ ++.+| .+.+|..+.
T Consensus 256 ~v~~~~~s~~g~~las~~~D~-~v~lw~~~~ 285 (297)
T 2pm7_B 256 VLWRASWSLSGNVLALSGGDN-KVTLWKENL 285 (297)
T ss_dssp CEEEEEECSSSCCEEEEETTS-CEEEEEECT
T ss_pred cEEEEEECCCCCEEEEEcCCC-cEEEEEECC
Confidence 1112222 2455554 44454 466776553
No 290
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.72 E-value=1.5 Score=41.70 Aligned_cols=74 Identities=15% Similarity=0.094 Sum_probs=47.5
Q ss_pred eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeee-cCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEe
Q 040693 249 DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWST-ADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMD 327 (382)
Q Consensus 249 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld 327 (382)
+++.||++.. ....|..+|.. |+.+... ...........+.+.++.+|++.. ..+.|+.+|
T Consensus 256 ~~~~lY~aD~----------------~~~~I~~~d~d-G~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~-~~~~V~~~~ 317 (400)
T 3p5b_L 256 LSGRLYWVDS----------------KLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI-INEAIFSAN 317 (400)
T ss_dssp TTTEEEEEET----------------TTTEEEEEETT-SCCCEEEEECSSTTSSEEEEEEETTEEEEEES-SSCSEEEEE
T ss_pred CCCEEEEEEC----------------CCCEEEEEeCC-CCccEEEEeCCCCCCCCEEEEEeCCEEEEecC-CCCeEEEEE
Confidence 3788998732 34679999985 4333333 221111122245567888888874 678999999
Q ss_pred CCCCcEeEEEecC
Q 040693 328 VKTGKILWSYDTG 340 (382)
Q Consensus 328 ~~tG~ilw~~~~~ 340 (382)
..+|+.+-.+..+
T Consensus 318 ~~~G~~~~~i~~~ 330 (400)
T 3p5b_L 318 RLTGSDVNLLAEN 330 (400)
T ss_dssp SSSCCCCEEEECS
T ss_pred cCCCCceEEEecC
Confidence 9899887766543
No 291
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.72 E-value=2.1 Score=43.61 Aligned_cols=84 Identities=11% Similarity=0.055 Sum_probs=48.5
Q ss_pred ceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecC--CCcEEEEeCCCCcE-eEEEecCC--ceecceEEeC
Q 040693 277 GGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYR--QGPIYAMDVKTGKI-LWSYDTGA--TIYGGASVSN 351 (382)
Q Consensus 277 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~g~l~~ld~~tG~i-lw~~~~~~--~~~~~p~~~~ 351 (382)
+.++.+|+.+++..|+.-.........++..+++.+|+.+... .+.|+.+|+++++. .|+.=++. ... +....+
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~~g 337 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHSGS 337 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEET
T ss_pred cEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEEEC
Confidence 5799999988864444322211112233445677777776411 36899999998764 45532222 233 555566
Q ss_pred CEEEEEeCce
Q 040693 352 GCIYMGNGYK 361 (382)
Q Consensus 352 g~lyv~~~~g 361 (382)
+.|++....+
T Consensus 338 ~~lv~~~~~~ 347 (693)
T 3iuj_A 338 GYLFAEYMVD 347 (693)
T ss_dssp TEEEEEEEET
T ss_pred CEEEEEEEEC
Confidence 7776665433
No 292
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.51 E-value=0.66 Score=42.59 Aligned_cols=106 Identities=5% Similarity=-0.048 Sum_probs=56.8
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+..|+++..|+.+..+|..+++..-...... .......... ++..++.+ ..++.|..+
T Consensus 73 g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~---h~~~v~~v~~sp~~~~l~s~-----------------s~D~~v~iw 132 (345)
T 3fm0_A 73 GNYLASASFDATTCIWKKNQDDFECVTTLEG---HENEVKSVAWAPSGNLLATC-----------------SRDKSVWVW 132 (345)
T ss_dssp SSEEEEEETTSCEEEEEECCC-EEEEEEECC---CSSCEEEEEECTTSSEEEEE-----------------ETTSCEEEE
T ss_pred CCEEEEEECCCcEEEEEccCCCeEEEEEccC---CCCCceEEEEeCCCCEEEEE-----------------ECCCeEEEE
Confidence 3678888889988888887775332222211 0111222222 44555554 345788999
Q ss_pred ECCCCcEEe---eecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEe
Q 040693 283 DASNGNVLW---STADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKIL 334 (382)
Q Consensus 283 d~~tG~~~W---~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~il 334 (382)
|+.+++..- ....... ....+.. ++.+++.++ .++.|..+|..+++..
T Consensus 133 d~~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~l~s~s--~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 133 EVDEEDEYECVSVLNSHTQ--DVKHVVWHPSQELLASAS--YDDTVKLYREEEDDWV 185 (345)
T ss_dssp EECTTSCEEEEEEECCCCS--CEEEEEECSSSSCEEEEE--TTSCEEEEEEETTEEE
T ss_pred ECCCCCCeEEEEEecCcCC--CeEEEEECCCCCEEEEEe--CCCcEEEEEecCCCEE
Confidence 988775322 1221111 1112222 234566666 4889999998877643
No 293
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.43 E-value=1.4 Score=39.77 Aligned_cols=21 Identities=14% Similarity=-0.009 Sum_probs=16.8
Q ss_pred ecEEEEEccCcEEEEEeCCCC
Q 040693 205 HDIVVAVQKSGFAWALDRDSG 225 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG 225 (382)
+..+.++..|+.+..+|..++
T Consensus 117 g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 117 GLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp CSCEEEECSSSCEEEEEECSS
T ss_pred CcEEEEEcCCCCEEEEecCCC
Confidence 356778888999999998765
No 294
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.34 E-value=1.8 Score=43.90 Aligned_cols=133 Identities=9% Similarity=-0.017 Sum_probs=62.9
Q ss_pred cEEEEEeCCCCCeeeeeccCCC--CCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEee
Q 040693 215 GFAWALDRDSGSLIWSMEAGPG--GLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWS 292 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~~~~--~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~ 292 (382)
..+..+|+++++ |+.-.... ........+....++.+|+.... ++..+.. .....+..+|+++.+ |.
T Consensus 314 ~~~e~yd~~t~~--W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~-~g~~~~~------~~~~~v~~yd~~~~~--w~ 382 (656)
T 1k3i_A 314 KNGEVYSPSSKT--WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWK-KGSVFQA------GPSTAMNWYYTSGSG--DV 382 (656)
T ss_dssp CCEEEEETTTTE--EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECG-GGCEEEC------CSSSEEEEEECSTTC--EE
T ss_pred ccceEeCCCCCc--ceeCCCccccccccccccceeecCCceEEEECC-CCcEEEe------cCccceeeeecCCcc--ee
Confidence 458899998764 87642110 00000111222234555544322 1111111 123578999998764 33
Q ss_pred ecCCCC---------CCCCcceEE--eCCEEEEeeecC-------CC---cEEEEeCCCCcEeEEEe----cCCc-eecc
Q 040693 293 TADPSN---------GTAPGPVTV--ANGVLFGGSTYR-------QG---PIYAMDVKTGKILWSYD----TGAT-IYGG 346 (382)
Q Consensus 293 ~~~~~~---------~~~~~~~~~--~~~~v~~~~~~~-------~g---~l~~ld~~tG~ilw~~~----~~~~-~~~~ 346 (382)
...... ......+.+ .++.+|+..... .. .+.++|+++.+ |+.. ++.+ ...+
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~mp~~R~~~~ 460 (656)
T 1k3i_A 383 KSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSP--NTVFASNGLYFARTFHT 460 (656)
T ss_dssp EEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC--EEEECTTCCSSCCBSCE
T ss_pred ecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC--eeEEccCCCCCCcccCC
Confidence 222111 112223322 367777654210 01 57778877655 6543 2322 3334
Q ss_pred eEEe-CCEEEEEeCc
Q 040693 347 ASVS-NGCIYMGNGY 360 (382)
Q Consensus 347 p~~~-~g~lyv~~~~ 360 (382)
.++. +++|||..+.
T Consensus 461 ~~~l~~g~i~v~GG~ 475 (656)
T 1k3i_A 461 SVVLPDGSTFITGGQ 475 (656)
T ss_dssp EEECTTSCEEEECCB
T ss_pred eEECCCCCEEEECCc
Confidence 3444 9999998764
No 295
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=95.33 E-value=0.021 Score=58.49 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=41.2
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|+.+|.++|+.+=......... ....++.+.+++..|+++.....
T Consensus 35 d~~i~~~~~~~g~~~~~~~~~~~~~----------~~~~~~~~SpDg~~la~~~~~~~---------------------- 82 (719)
T 1z68_A 35 DNNIVLYNIETGQSYTILSNRTMKS----------VNASNYGLSPDRQFVYLESDYSK---------------------- 82 (719)
T ss_dssp TSCEEEEESSSCCEEEEECHHHHHT----------TTCSEEEECTTSSEEEEEEEEEE----------------------
T ss_pred CCCEEEEEcCCCcEEEEEccccccc----------cceeeEEECCCCCeEEEEecCce----------------------
Confidence 7789999999998754433210000 00125778888888877654100
Q ss_pred CCCCCCCCcceEEEEECCCCcEE
Q 040693 134 KCIEPENHSNSLLALDLDTGKIV 156 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~ 156 (382)
..--..++.|+.+|.++|+.+
T Consensus 83 --~~~~s~~~~i~~~d~~~g~~~ 103 (719)
T 1z68_A 83 --LWRYSYTATYYIYDLSNGEFV 103 (719)
T ss_dssp --CSSSCEEEEEEEEETTTTEEC
T ss_pred --eEEeecceEEEEEECCCCccc
Confidence 000012378999999999874
No 296
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.31 E-value=1.5 Score=39.07 Aligned_cols=186 Identities=8% Similarity=0.058 Sum_probs=100.8
Q ss_pred ceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCCCCCCCCCCcceEEEEECCCCcEEEEEecCCCccccccccc
Q 040693 94 PSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPDKCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNW 173 (382)
Q Consensus 94 ~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~ 173 (382)
.+++++++.+|+.... .+.|+.||+. |+++.+.+.......
T Consensus 32 la~~~~~~~L~aV~d~--------------------------------~~~I~~ld~~-g~v~~~i~l~g~~D~------ 72 (255)
T 3qqz_A 32 LTWSAQSNTLFSTINK--------------------------------PAAIVEMTTN-GDLIRTIPLDFVKDL------ 72 (255)
T ss_dssp EEEETTTTEEEEEEET--------------------------------TEEEEEEETT-CCEEEEEECSSCSSE------
T ss_pred eEEeCCCCEEEEEECC--------------------------------CCeEEEEeCC-CCEEEEEecCCCCCh------
Confidence 5677777888886653 3899999987 999998877532110
Q ss_pred CCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCC-C--C-CCCCcccceee-
Q 040693 174 YLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGP-G--G-LGGGAMWGAAT- 248 (382)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~-~--~-~~g~~~~~~~~- 248 (382)
..+...+ .+..+++...++.++.++..+...+|...... + . ......-+.++
T Consensus 73 ----------------------EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d 129 (255)
T 3qqz_A 73 ----------------------ETIEYIG-DNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYS 129 (255)
T ss_dssp ----------------------EEEEECS-TTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEE
T ss_pred ----------------------HHeEEeC-CCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEe
Confidence 1111111 12333455566778877765544444332111 0 0 00111233344
Q ss_pred -eCCeEEEEecCccccccccCCCCCCCCCceEEEEECC-CC---cEE----eeecCCCCCCCCcceEEe--CCEEEEeee
Q 040693 249 -DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS-NG---NVL----WSTADPSNGTAPGPVTVA--NGVLFGGST 317 (382)
Q Consensus 249 -~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~-tG---~~~----W~~~~~~~~~~~~~~~~~--~~~v~~~~~ 317 (382)
.++.+|+..... ...|+.++-. ++ ++. +..... ....+.+.++ .+.+|+.+.
T Consensus 130 ~~~~~L~va~E~~---------------p~~i~~~~g~~~~~~l~i~~~~~~~~~~~--~~d~S~l~~dp~tg~lliLS~ 192 (255)
T 3qqz_A 130 RQDHTFWFFKEKN---------------PIEVYKVNGLLSSNELHISKDKALQRQFT--LDDVSGAEFNQQKNTLLVLSH 192 (255)
T ss_dssp TTTTEEEEEEESS---------------SEEEEEEESTTCSSCCEEEECHHHHHTCC--SSCCCEEEEETTTTEEEEEET
T ss_pred CCCCEEEEEECcC---------------CceEEEEcccccCCceeeecchhhccccc--cCCceeEEEcCCCCeEEEEEC
Confidence 355788864321 1246666611 11 111 110111 1123455555 367888774
Q ss_pred cCCCcEEEEeCCCCcEeEEEecCCcee---------cceEE-eCCEEEEEeCc
Q 040693 318 YRQGPIYAMDVKTGKILWSYDTGATIY---------GGASV-SNGCIYMGNGY 360 (382)
Q Consensus 318 ~~~g~l~~ld~~tG~ilw~~~~~~~~~---------~~p~~-~~g~lyv~~~~ 360 (382)
....|..+|.+ |+++-.+.+..+.. -..++ .+|+|||++.-
T Consensus 193 -~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 193 -ESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp -TTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT
T ss_pred -CCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC
Confidence 56789999976 88988888875321 12233 57899999764
No 297
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.28 E-value=2.7 Score=42.00 Aligned_cols=110 Identities=10% Similarity=0.013 Sum_probs=63.7
Q ss_pred ecEEEEEccCcEEEEEeCCCCCe-------eeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCC
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSL-------IWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIA 276 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~-------~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 276 (382)
+..|++++.||.+..+|..+++. +-.++....+ ........+. .++ +.++ ..+
T Consensus 141 G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~g-h~~~V~sVawSPdg-Laas-----------------s~D 201 (588)
T 2j04_A 141 ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAG-SKDWVTHIVWYEDV-LVAA-----------------LSN 201 (588)
T ss_dssp SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTT-CCCCEEEEEEETTE-EEEE-----------------ETT
T ss_pred CCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccccc-ccccEEEEEEcCCc-EEEE-----------------eCC
Confidence 47888899999999999998863 3333322110 0011222222 233 3333 235
Q ss_pred ceEEEEECCCCcE--Eeee--cCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcE-eEEEe
Q 040693 277 GGWVAMDASNGNV--LWST--ADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKI-LWSYD 338 (382)
Q Consensus 277 g~v~a~d~~tG~~--~W~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~i-lw~~~ 338 (382)
+.+..+|+.+++. .|+. .... .....+...++.+..+. ++.|...|.++++. ..+..
T Consensus 202 ~tVrlWd~~~~~~~~~~~tL~~~h~--~~V~svaFsg~~LASa~---~~tIkLWd~~~~~~~~~~~g 263 (588)
T 2j04_A 202 NSVFSMTVSASSHQPVSRMIQNASR--RKITDLKIVDYKVVLTC---PGYVHKIDLKNYSISSLKTG 263 (588)
T ss_dssp CCEEEECCCSSSSCCCEEEEECCCS--SCCCCEEEETTEEEEEC---SSEEEEEETTTTEEEEEECS
T ss_pred CeEEEEECCCCccccceeeeccccc--CcEEEEEEECCEEEEEe---CCeEEEEECCCCeEEEEEcC
Confidence 7899999988874 2333 1221 12223333356666554 68999999998888 55543
No 298
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=94.96 E-value=0.54 Score=46.53 Aligned_cols=141 Identities=12% Similarity=0.084 Sum_probs=73.4
Q ss_pred cEEEEEccCcEEEEEeCCCCCe-eeeeccCCCCCCCCcccce--ee-eCC-eEEEEecCccccccccCCCCCCCCCceEE
Q 040693 206 DIVVAVQKSGFAWALDRDSGSL-IWSMEAGPGGLGGGAMWGA--AT-DER-RIYTNIANSQHKNFNLKPSKNSTIAGGWV 280 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~-~W~~~~~~~~~~g~~~~~~--~~-~~~-~v~~~~~~~~~~~~~~~~~~~~~~~g~v~ 280 (382)
..|++++.||.+..+|..+++. ......-. ...... .. .++ .++++. ..+++|.
T Consensus 278 ~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~-----~~V~sv~~~~s~~g~~~laS~----------------S~D~tvk 336 (524)
T 2j04_B 278 TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHD-----SYILSVSTAYSDFEDTVVSTV----------------AVDGYFY 336 (524)
T ss_dssp SEEEEEETTSEEEEEETTBCSSCSEEEECSS-----SCEEEEEEECCTTSCCEEEEE----------------ETTSEEE
T ss_pred CeEEEEeCCCEEEEEECCCCCCceEEeeccc-----ccEEEEEEEcCCCCCeEEEEe----------------ccCCeEE
Confidence 4788999999999999998743 22232111 112222 11 222 444432 3468899
Q ss_pred EEECCCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEE
Q 040693 281 AMDASNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMG 357 (382)
Q Consensus 281 a~d~~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~ 357 (382)
.+|+++++..-.............+.+. +..+..++ .++.|..+|..+++.+..+.-......+... .+++++++
T Consensus 337 lWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~--~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 337 IFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSD--GASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp EECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEEC--SSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEE
T ss_pred EEECCCCCcccccccccccCcccceEeCCCcCeEEEeC--CCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEE
Confidence 9999988754332211100011223333 23444444 4778999999999876655432222222222 24444444
Q ss_pred eCceeEeecCCc
Q 040693 358 NGYKVTVGFGNK 369 (382)
Q Consensus 358 ~~~g~~~~~~~~ 369 (382)
.+.+..+.+|..
T Consensus 415 gs~Dgtv~lwd~ 426 (524)
T 2j04_B 415 GSADGSLIITNA 426 (524)
T ss_dssp EETTTEEECCBS
T ss_pred EECCCEEEEEec
Confidence 443344555543
No 299
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.89 E-value=3.8 Score=41.61 Aligned_cols=99 Identities=12% Similarity=0.111 Sum_probs=50.6
Q ss_pred CceEEEEECCCCcE-EeeecCCCC-CCCCcceEEeCCEEEEeeecCC--CcEEEEeCCCCcEeEEEecC-CceecceEE-
Q 040693 276 AGGWVAMDASNGNV-LWSTADPSN-GTAPGPVTVANGVLFGGSTYRQ--GPIYAMDVKTGKILWSYDTG-ATIYGGASV- 349 (382)
Q Consensus 276 ~g~v~a~d~~tG~~-~W~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~--g~l~~ld~~tG~ilw~~~~~-~~~~~~p~~- 349 (382)
.+.|+.+|+.+++. .|+.-.+.. ......+...++.+++... .+ .+|+.+|.+ |+.+.+...+ ......+..
T Consensus 294 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~-~dg~~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s 371 (695)
T 2bkl_A 294 RQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYL-KDATSEVRVATLK-GKPVRTVQLPGVGAASNLMGL 371 (695)
T ss_dssp TCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEE-ETTEEEEEEEETT-CCEEEECCCSSSSEECCCBSC
T ss_pred CCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEE-ECCEEEEEEEeCC-CCeeEEecCCCCeEEEEeecC
Confidence 47899999988863 355433321 1111222334555554432 23 368888875 6665555544 222222222
Q ss_pred -eCCEEEEEeC-ceeEeecCCccCCCCCe
Q 040693 350 -SNGCIYMGNG-YKVTVGFGNKNFTSGTS 376 (382)
Q Consensus 350 -~~g~lyv~~~-~g~~~~~~~~~~~~g~~ 376 (382)
.+..+++..+ ...-..+|..|..+|+.
T Consensus 372 ~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 372 EDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 3446665433 22223456667777764
No 300
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=94.59 E-value=4.1 Score=43.60 Aligned_cols=54 Identities=11% Similarity=-0.004 Sum_probs=33.2
Q ss_pred eceEEEcCEEEEeccCccccccccccccccceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEE
Q 040693 25 MSGTYYKGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVY 104 (382)
Q Consensus 25 ~~p~v~~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~ 104 (382)
..|.+.++.+++.. .+.|+.+|.++|+.. +....+ .. ...+.+.+++..|+
T Consensus 18 ~~~~~S~~~iaf~~---------------~~~l~~~~~~gg~~~-~lt~~~-----------~~--v~~~~~SPDG~~la 68 (1045)
T 1k32_A 18 LNPDIHGDRIIFVC---------------CDDLWEHDLKSGSTR-KIVSNL-----------GV--INNARFFPDGRKIA 68 (1045)
T ss_dssp EEEEEETTEEEEEE---------------TTEEEEEETTTCCEE-EEECSS-----------SE--EEEEEECTTSSEEE
T ss_pred eCcEEeCCEEEEEE---------------CCcEEEEECCCCcEE-EeeeCC-----------Cc--ccCeEECCCCCEEE
Confidence 35666667666655 457999999888753 222110 01 13578888888777
Q ss_pred EEc
Q 040693 105 IAT 107 (382)
Q Consensus 105 v~~ 107 (382)
+..
T Consensus 69 ~~s 71 (1045)
T 1k32_A 69 IRV 71 (1045)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 301
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.54 E-value=3.1 Score=38.93 Aligned_cols=95 Identities=17% Similarity=0.161 Sum_probs=51.9
Q ss_pred eCCeEEEEecCccccccccCCCCCCCCCceEEEEECC-CCcEEee--ecCCCCCCCCcceEEe--CCEEEEeeecCCCcE
Q 040693 249 DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS-NGNVLWS--TADPSNGTAPGPVTVA--NGVLFGGSTYRQGPI 323 (382)
Q Consensus 249 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~-tG~~~W~--~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l 323 (382)
|+..+|++. +..++|+++|.. +|+..=+ +..+. ...-+.++ +|.+|++.....++|
T Consensus 231 Dg~~lYvad----------------t~~~~I~~~~~~~~g~l~~~~~~~~~g---~PDGi~vD~e~G~lwva~~~~g~~v 291 (355)
T 3sre_A 231 DGKYVYIAE----------------LLAHKIHVYEKHANWTLTPLRVLSFDT---LVDNISVDPVTGDLWVGCHPNGMRI 291 (355)
T ss_dssp TSSEEEEEE----------------GGGTEEEEEEECTTSCEEEEEEEECSS---EEEEEEECTTTCCEEEEEESCHHHH
T ss_pred CCCEEEEEe----------------CCCCeEEEEEECCCCcEecCEEEeCCC---CCceEEEeCCCCcEEEEecCCceEE
Confidence 667899873 234779999875 4544221 12221 12234455 378888653122455
Q ss_pred EEEeCC--CCcEeEEEec--------------CCc---eecceEEeCCEEEEEeCcee
Q 040693 324 YAMDVK--TGKILWSYDT--------------GAT---IYGGASVSNGCIYMGNGYKV 362 (382)
Q Consensus 324 ~~ld~~--tG~ilw~~~~--------------~~~---~~~~p~~~~g~lyv~~~~g~ 362 (382)
..+|++ .|+.+++... .+. ..+..+..+++||+++-...
T Consensus 292 ~~~~P~~~~~s~v~rI~~~~~~~~~v~~v~~ddG~~l~~~T~a~~~~g~L~iGsv~~~ 349 (355)
T 3sre_A 292 FFYDAENPPGSEVLRIQDILSEEPKVTVVYAENGTVLQGSTVAAVYKGKLLIGTVFHK 349 (355)
T ss_dssp HSCCTTSCCCEEEEEEECTTSSSCEEEEEEEECSSSCCSEEEEEEETTEEEEEESSSC
T ss_pred EEECCCCCCCCEEEEEEccCCCCcEEEEEEEcCCCEEEeeEEEEEECCEEEEEEcCCC
Confidence 555554 3555555543 121 22334458899999876544
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.21 E-value=5 Score=40.49 Aligned_cols=146 Identities=11% Similarity=-0.026 Sum_probs=75.5
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+.+.++....+.+..+|.+ |+.+-..-... . ....+.++ .++.+|++... ..+.|..+
T Consensus 96 ~~ly~~d~~~~~I~v~~~d-G~~~~~l~~~~--l--~~P~~Iavdp~~g~ly~tD~g---------------~~~~I~r~ 155 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLD-GSLRKVLFWQE--L--DQPRAIALDPSSGFMYWTDWG---------------EVPKIERA 155 (619)
T ss_dssp TEEEEEETTTTEEEEEETT-SCSCEEEECSS--C--SCCCCEEEETTTTEEEEEECS---------------SSCEEEEE
T ss_pred CEEEEEeCCCCEEEEEECC-CCCEEEEEeCC--C--CCCceEEEecCCCeEEEeccC---------------CCCEEEEE
Confidence 3344445566788888876 44322221110 1 12233444 46889987432 12567777
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEEec-CCceecceEEeCCEEEEEeC
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSYDT-GATIYGGASVSNGCIYMGNG 359 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~-~~~~~~~p~~~~g~lyv~~~ 359 (382)
+.. |+.+-..-... ..+...++++ ++++|++.. ..+.|+.+|.+ |.....+-. ....-....+.+++||++..
T Consensus 156 ~~d-G~~~~~l~~~~-~~~P~Glald~~~~~LY~aD~-~~~~I~~~~~d-G~~~~~~~~~~~~~P~gi~~~~~~ly~td~ 231 (619)
T 3s94_A 156 GMD-GSSRFIIINSE-IYWPNGLTLDYEEQKLYWADA-KLNFIHKSNLD-GTNRQAVVKGSLPHPFALTLFEDILYWTDW 231 (619)
T ss_dssp ETT-SCSCEEEECSS-CSSEEEEEEETTTTEEEEEET-TTCCEEEESSS-CCEEC---------CCCEEESSSEEEEECT
T ss_pred ECC-CCceEEEEeCC-CCCCcEEEEEccCCEEEEEeC-CCCeEEEecCC-CCccEEEEeCCCCCceEEEEeCCEEEEecC
Confidence 764 33221111101 1122345555 689999875 56889999986 544443322 11122345667889999976
Q ss_pred ceeEeecCCccCCCCCe
Q 040693 360 YKVTVGFGNKNFTSGTS 376 (382)
Q Consensus 360 ~g~~~~~~~~~~~~g~~ 376 (382)
... .+..+|..+|+.
T Consensus 232 ~~~--~V~~~d~~tg~~ 246 (619)
T 3s94_A 232 STH--SILACNKYTGEG 246 (619)
T ss_dssp TTC--SEEEEESSSCCC
T ss_pred CCC--EEEEEECCCCcc
Confidence 433 234566666653
No 303
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=94.18 E-value=3.7 Score=42.08 Aligned_cols=111 Identities=10% Similarity=0.030 Sum_probs=58.8
Q ss_pred cceEEEEeCccCceeeeeeccCCCCCCCCCCcCccccCCCceeeCCCCeEEEEcCCCCCCCcchhhcccccCCCCCCCCC
Q 040693 54 QGSLAKLDAKTGRILWQTFMLPDNFGKLNEYAGAAIWGSSPSIDPIRNHVYIATGNLYSVPLHIRQCQEENNQTTPTSPD 133 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
++.|+.+|.+||+..=.... .... .+... ...+.+.+++..|++.....-
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~--~~~~---~~~~~---~~~~~~Spdg~~l~~~~~~~~---------------------- 84 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLEN--STFD---EFGHS---INDYSISPDGQFILLEYNYVK---------------------- 84 (740)
T ss_dssp TTEEEEEETTTCCEEEEECT--TTTT---TCCSC---CCEEEECTTSSEEEEEEEEEE----------------------
T ss_pred CCcEEEEECCCCceEEEEec--hhhh---hhccc---ccceEECCCCCEEEEEECCee----------------------
Confidence 67899999999986421111 1000 00000 012566788888887765310
Q ss_pred CCCCCCCCcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEcc
Q 040693 134 KCIEPENHSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQK 213 (382)
Q Consensus 134 ~~~~~~~~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~ 213 (382)
+.-.+..+.++.+|.++|+..- +.... ..-.....+++| ..++++ .
T Consensus 85 --~~r~~~~~~~~~~d~~~~~~~~---l~~~~-------------------------~~~~~~~~SPdG--~~la~~--~ 130 (740)
T 4a5s_A 85 --QWRHSYTASYDIYDLNKRQLIT---EERIP-------------------------NNTQWVTWSPVG--HKLAYV--W 130 (740)
T ss_dssp --CSSSCEEEEEEEEETTTTEECC---SSCCC-------------------------TTEEEEEECSST--TCEEEE--E
T ss_pred --eEEEccceEEEEEECCCCcEEE---cccCC-------------------------CcceeeEECCCC--CEEEEE--E
Confidence 0001223788999999987542 22110 111112234455 344444 3
Q ss_pred CcEEEEEeCCCCCee
Q 040693 214 SGFAWALDRDSGSLI 228 (382)
Q Consensus 214 ~g~l~ald~~tG~~~ 228 (382)
++.|+.+|..+|+..
T Consensus 131 ~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 131 NNDIYVKIEPNLPSY 145 (740)
T ss_dssp TTEEEEESSTTSCCE
T ss_pred CCeEEEEECCCCceE
Confidence 567999999988754
No 304
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.16 E-value=3.3 Score=37.83 Aligned_cols=112 Identities=14% Similarity=-0.005 Sum_probs=63.7
Q ss_pred ecEEEEEcc--CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEE
Q 040693 205 HDIVVAVQK--SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWV 280 (382)
Q Consensus 205 ~~~v~~~~~--~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~ 280 (382)
++.||+... .+.|+.++.+ |+.+-..-... .....+.++ +++.||++.. ..+.|.
T Consensus 133 ~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~----l~~Pnglavd~~~~~lY~aD~----------------~~~~I~ 191 (318)
T 3sov_A 133 SGFMYWTDWGEVPKIERAGMD-GSSRFIIINSE----IYWPNGLTLDYEEQKLYWADA----------------KLNFIH 191 (318)
T ss_dssp GTEEEEEECSSSCEEEEEETT-SCSCEEEECSS----CSCEEEEEEETTTTEEEEEET----------------TTTEEE
T ss_pred CCEEEEEecCCCCEEEEEEcC-CCCeEEEEECC----CCCccEEEEeccCCEEEEEEC----------------CCCEEE
Confidence 356666552 4678888865 54332221110 012233444 4788999732 346799
Q ss_pred EEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecC
Q 040693 281 AMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTG 340 (382)
Q Consensus 281 a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~ 340 (382)
.+|.......--..... .....+.++++.+|++.. ..+.|..+|+.+|+.+-.+..+
T Consensus 192 ~~d~dG~~~~~~~~~~~--~~P~glav~~~~lywtd~-~~~~V~~~~~~~G~~~~~i~~~ 248 (318)
T 3sov_A 192 KSNLDGTNRQAVVKGSL--PHPFALTLFEDILYWTDW-STHSILACNKYTGEGLREIHSD 248 (318)
T ss_dssp EEETTSCSCEEEECSCC--SCEEEEEEETTEEEEEET-TTTEEEEEETTTCCSCEEEECC
T ss_pred EEcCCCCceEEEecCCC--CCceEEEEeCCEEEEEec-CCCeEEEEECCCCCceEEEeCC
Confidence 99986432221111111 112234567788888864 6789999999899876666544
No 305
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=94.14 E-value=0.9 Score=43.74 Aligned_cols=149 Identities=12% Similarity=-0.038 Sum_probs=77.7
Q ss_pred cEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEEC
Q 040693 206 DIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDA 284 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~ 284 (382)
+.||+....+.|+.+|.++|++.-.... .....+.++ .++.||++..... .....++.++.
T Consensus 153 g~Lyv~D~~~~I~~id~~~g~v~~~~~~------~~~P~giavd~dG~lyVad~~~~------------~~~~gv~~~~~ 214 (433)
T 4hw6_A 153 DDLYWVGQRDAFRHVDFVNQYVDIKTTN------IGQCADVNFTLNGDMVVVDDQSS------------DTNTGIYLFTR 214 (433)
T ss_dssp CEEEEECBTSCEEEEETTTTEEEEECCC------CSCEEEEEECTTCCEEEEECCSC------------TTSEEEEEECG
T ss_pred CEEEEEeCCCCEEEEECCCCEEEEeecC------CCCccEEEECCCCCEEEEcCCCC------------cccceEEEEEC
Confidence 5677776557899999988876543321 112223333 2334888743210 01123555665
Q ss_pred CCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEEe-cCCc-eecceEE--eCCEEEEEe
Q 040693 285 SNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSYD-TGAT-IYGGASV--SNGCIYMGN 358 (382)
Q Consensus 285 ~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~-~~~~-~~~~p~~--~~g~lyv~~ 358 (382)
..+.. +...... .....-+.++ ++.+|++.. ..++|+.+|+++|++..++. .+.. .....++ .+++||++.
T Consensus 215 ~~~~~-~~~~~~~-~~~P~giavd~~~G~lyv~d~-~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 215 ASGFT-ERLSLCN-ARGAKTCAVHPQNGKIYYTRY-HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp GGTTC-CEEEEEE-CSSBCCCEECTTTCCEEECBT-TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCee-ccccccc-cCCCCEEEEeCCCCeEEEEEC-CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 43322 1111110 0011123343 678998874 56899999999998844442 2221 1112333 234699998
Q ss_pred CceeEeecCCccCCCCC
Q 040693 359 GYKVTVGFGNKNFTSGT 375 (382)
Q Consensus 359 ~~g~~~~~~~~~~~~g~ 375 (382)
.....+..+.++..+++
T Consensus 292 ~~~~~I~~~~~d~~~~~ 308 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGK 308 (433)
T ss_dssp TTTTEEEEEEBCTTTCC
T ss_pred CCCCEEEEEeCCCCCcc
Confidence 76555545555554553
No 306
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=93.80 E-value=6.8 Score=40.10 Aligned_cols=145 Identities=12% Similarity=0.061 Sum_probs=70.1
Q ss_pred CcEEEEEeCCCCCee-eeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEee
Q 040693 214 SGFAWALDRDSGSLI-WSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWS 292 (382)
Q Consensus 214 ~g~l~ald~~tG~~~-W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~ 292 (382)
...++.+|.++|+.. |..-.... .. .......+++.+|+..... .....|+.+|+.+++..|+
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~--~~-~~~~~~~dg~~l~~~s~~~-------------~~~~~l~~~d~~~~~~~~~ 356 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDL--KA-QWDFVDGVGDQLWFVSGDG-------------APLKKIVRVDLSGSTPRFD 356 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSS--SS-CEEEEEEETTEEEEEECTT-------------CTTCEEEEEECSSSSCEEE
T ss_pred cceEEEEECCCCCCcccEEecCCC--Cc-eEEEEeccCCEEEEEECCC-------------CCCCEEEEEeCCCCccccE
Confidence 348999999887322 32211110 01 1111113777777764321 2246799999988633455
Q ss_pred ecCCCCCCCCcceEEeCCEEEEeeecCCC--cEEEEeCCCCcEeEEEecCC-ceecceEE--eCCEEEEE-eCceeEeec
Q 040693 293 TADPSNGTAPGPVTVANGVLFGGSTYRQG--PIYAMDVKTGKILWSYDTGA-TIYGGASV--SNGCIYMG-NGYKVTVGF 366 (382)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~g--~l~~ld~~tG~ilw~~~~~~-~~~~~p~~--~~g~lyv~-~~~g~~~~~ 366 (382)
.-.+........+...++.+++... .++ +|+.+|.+ |+.+.+...+. +....+.. .+..|++. ++...-..+
T Consensus 357 ~l~~~~~~~l~~~~~~~~~lv~~~~-~dg~~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i 434 (741)
T 1yr2_A 357 TVVPESKDNLESVGIAGNRLFASYI-HDAKSQVLAFDLD-GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATV 434 (741)
T ss_dssp EEECCCSSEEEEEEEEBTEEEEEEE-ETTEEEEEEEETT-SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEE
T ss_pred EEecCCCCeEEEEEEECCEEEEEEE-ECCEEEEEEEeCC-CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEE
Confidence 4333321111122333554444432 243 58888874 66665555432 22222222 23445554 333233445
Q ss_pred CCccCCCCCe
Q 040693 367 GNKNFTSGTS 376 (382)
Q Consensus 367 ~~~~~~~g~~ 376 (382)
|..|..+|+.
T Consensus 435 ~~~d~~tg~~ 444 (741)
T 1yr2_A 435 LALDPATAKT 444 (741)
T ss_dssp EEEETTTTEE
T ss_pred EEEECCCCcE
Confidence 6666666653
No 307
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.69 E-value=2.2 Score=38.48 Aligned_cols=22 Identities=9% Similarity=0.164 Sum_probs=18.5
Q ss_pred ecEEEEEccCcEEEEEeCCCCC
Q 040693 205 HDIVVAVQKSGFAWALDRDSGS 226 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~ 226 (382)
+..|+.++.|+.+..+|..+|+
T Consensus 71 ~~~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 71 GNILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp SSCEEEEETTSCEEEECCSSSC
T ss_pred CCEEEEEECCCEEEEEECCCCc
Confidence 3578888899999999999875
No 308
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=93.66 E-value=4.6 Score=37.69 Aligned_cols=111 Identities=17% Similarity=0.145 Sum_probs=66.8
Q ss_pred EEEEEccCcEEEEEeC-------CCCCeeeeeccCCCCCCCCcccceeee--CCeEEEEecCccccccccCCCCCCCCCc
Q 040693 207 IVVAVQKSGFAWALDR-------DSGSLIWSMEAGPGGLGGGAMWGAATD--ERRIYTNIANSQHKNFNLKPSKNSTIAG 277 (382)
Q Consensus 207 ~v~~~~~~g~l~ald~-------~tG~~~W~~~~~~~~~~g~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~g 277 (382)
.+++..++|.+.-++. .++++..++..+. ..-+.++| .+.||++.. ..
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs------q~EgcvvDd~~g~Lyv~eE-----------------d~ 201 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS------QTEGMAADDEYGRLYIAEE-----------------DE 201 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS------CEEEEEEETTTTEEEEEET-----------------TT
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC------CcceEEEcCCCCeEEEecc-----------------cc
Confidence 5777777776655433 2346667777643 12233333 589999843 34
Q ss_pred eEEEEECC-----CCcEEeeecCCCC--CCCCcceEEeC---CEEEEeeecCCCcEEEEeCC-CCcEeEEEecCC
Q 040693 278 GWVAMDAS-----NGNVLWSTADPSN--GTAPGPVTVAN---GVLFGGSTYRQGPIYAMDVK-TGKILWSYDTGA 341 (382)
Q Consensus 278 ~v~a~d~~-----tG~~~W~~~~~~~--~~~~~~~~~~~---~~v~~~~~~~~g~l~~ld~~-tG~ilw~~~~~~ 341 (382)
.|+.||+. +++++.......- ....-.+.... +++++++. .+..+.++|.+ +.+.+-++.++.
T Consensus 202 GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ-G~~s~~Vydr~~~~~~vg~f~Ig~ 275 (355)
T 3amr_A 202 AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ-GNSSYAIYDRQGKNKYVADFRITD 275 (355)
T ss_dssp EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG-GGTEEEEEESSTTCCEEEEEEECC
T ss_pred eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC-CCCEEEEEECCCCCcEEEEEEecC
Confidence 59999955 4677766653321 11122222122 47888774 45689999997 788898887553
No 309
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=93.42 E-value=3.1 Score=38.84 Aligned_cols=27 Identities=15% Similarity=-0.028 Sum_probs=15.1
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeee
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSM 231 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~ 231 (382)
+..|+.+..++.+..+|..+++..-.+
T Consensus 267 g~~l~s~s~d~~i~vwd~~~~~~~~~l 293 (393)
T 4gq1_A 267 GSGILAMCKSGAWLRWNLFANNDYNEI 293 (393)
T ss_dssp TCEEEEECTTSEEEEEEC---------
T ss_pred CCEEEEEeCCCCEEEEECccCCCCceE
Confidence 457888888999999998887655433
No 310
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=93.17 E-value=1.4 Score=42.20 Aligned_cols=149 Identities=9% Similarity=0.014 Sum_probs=77.1
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
++.||+....+.|+.+|.+++++.-.... .......++ +++.||++..... .....++.+
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~~------~~~P~~ia~d~~G~~lyvad~~~~------------~~~~~v~~~ 210 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYSG------LSKVRTICWTHEADSMIITNDQNN------------NDRPNNYIL 210 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEECC------CSCEEEEEECTTSSEEEEEECCSC------------TTSEEEEEE
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEecC------CCCcceEEEeCCCCEEEEEeCCCC------------cccceEEEE
Confidence 45677776558899999987765433221 112233333 4566888743211 111245666
Q ss_pred ECCCCcEEeeecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCc-eecceEEe-CC-EEEEE
Q 040693 283 DASNGNVLWSTADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGAT-IYGGASVS-NG-CIYMG 357 (382)
Q Consensus 283 d~~tG~~~W~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~-~~~~p~~~-~g-~lyv~ 357 (382)
+.. |+......+.. ......+.++ ++.+|++.. ..++|+.+|+++++..-....+.. .-...++. ++ +||++
T Consensus 211 ~~~-g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~-~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 211 TRE-SGFKVITELTK-GQNCNGAETHPINGELYFNSW-NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp EGG-GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEET-TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred eCC-Cceeeeeeecc-CCCceEEEEeCCCCEEEEEEC-CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEE
Confidence 653 43221111111 0011223343 578888874 578999999987765322333321 12233442 34 49999
Q ss_pred eCceeEeecCCccCCCC
Q 040693 358 NGYKVTVGFGNKNFTSG 374 (382)
Q Consensus 358 ~~~g~~~~~~~~~~~~g 374 (382)
......+..+..+..++
T Consensus 288 d~~~~~I~~~~~d~~~~ 304 (430)
T 3tc9_A 288 VVNQHYILRSDYDWKTK 304 (430)
T ss_dssp ETTTTEEEEEEEETTTT
T ss_pred ECCCCEEEEEeCCcccc
Confidence 87655554555554333
No 311
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=92.72 E-value=0.95 Score=41.65 Aligned_cols=69 Identities=12% Similarity=0.158 Sum_probs=44.9
Q ss_pred EEe-CCEEEEeeecC----CCcEEEEeCCCCcEeEEEecCCc------eecceEEe--CCEEEEEeC---ceeEeecCCc
Q 040693 306 TVA-NGVLFGGSTYR----QGPIYAMDVKTGKILWSYDTGAT------IYGGASVS--NGCIYMGNG---YKVTVGFGNK 369 (382)
Q Consensus 306 ~~~-~~~v~~~~~~~----~g~l~~ld~~tG~ilw~~~~~~~------~~~~p~~~--~g~lyv~~~---~g~~~~~~~~ 369 (382)
.++ ++++|+...+. ..+|+.+|+++|+++-++..+.. .....++. ++.+|++.. ... .++.+
T Consensus 73 ~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~--~i~v~ 150 (343)
T 2qe8_A 73 KSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA--ALIRV 150 (343)
T ss_dssp EECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC--EEEEE
T ss_pred EEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC--eEEEE
Confidence 444 47899887411 36899999999998877776421 22445565 579999976 322 24455
Q ss_pred cCCCCCe
Q 040693 370 NFTSGTS 376 (382)
Q Consensus 370 ~~~~g~~ 376 (382)
+..+|+.
T Consensus 151 d~~~g~~ 157 (343)
T 2qe8_A 151 DLQTGLA 157 (343)
T ss_dssp ETTTCCE
T ss_pred ECCCCCE
Confidence 6666664
No 312
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=92.56 E-value=11 Score=38.87 Aligned_cols=92 Identities=11% Similarity=0.021 Sum_probs=46.5
Q ss_pred CceEEEEECCCCcEEe--eecCCCCCCCCcceEEe---CCEEEEeeec---CCCcEEEEeCCCCcEeEEE---ecCCc-e
Q 040693 276 AGGWVAMDASNGNVLW--STADPSNGTAPGPVTVA---NGVLFGGSTY---RQGPIYAMDVKTGKILWSY---DTGAT-I 343 (382)
Q Consensus 276 ~g~v~a~d~~tG~~~W--~~~~~~~~~~~~~~~~~---~~~v~~~~~~---~~g~l~~ld~~tG~ilw~~---~~~~~-~ 343 (382)
...|+.+|+.+++..+ +.-.+.. .......+ ++.+|+.+.. ....|+.+|.++++ .|+. ..... .
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~--~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~-~~~~~li~~~~~~~ 370 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPRE--KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPS-DWSHVLVDHSEDVF 370 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCC--TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTT-CCCCEEECCCSSEE
T ss_pred CceEEEEECCCCCCCceeEEeecCC--CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcc-cceeeEECCCCCcE
Confidence 4679999999874334 3222221 11112233 6777776641 12479999987641 2321 11111 2
Q ss_pred ecceEEeCCEEEEEeCceeEeecCCcc
Q 040693 344 YGGASVSNGCIYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 344 ~~~p~~~~g~lyv~~~~g~~~~~~~~~ 370 (382)
.......++.|++....+....++.++
T Consensus 371 l~~~~~~~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 371 MESIAVRSNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEECCEEEEEEEeCCEEEEEEEe
Confidence 234445567777765543333344333
No 313
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=92.17 E-value=6.3 Score=35.39 Aligned_cols=86 Identities=13% Similarity=0.036 Sum_probs=39.6
Q ss_pred CceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCC--cEEEEeCCCCcEeEEEecCCceecceEEeCCE
Q 040693 276 AGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQG--PIYAMDVKTGKILWSYDTGATIYGGASVSNGC 353 (382)
Q Consensus 276 ~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g--~l~~ld~~tG~ilw~~~~~~~~~~~p~~~~g~ 353 (382)
...|+.+| +|+..-....... .....+...+++++.++. ++ .|+ ++ +|++.-.... ......+.+....
T Consensus 243 ~~~l~~~d--~~~~~~l~~~~~~-~~~~~~~~sdg~~~~~~~--~~~~~l~-~~--~g~~~~~~~~-~~~v~~~~~s~~~ 313 (347)
T 2gop_A 243 HNKLYIYD--GKEVMGILDEVDR-GVGQAKIKDGKVYFTLFE--EGSVNLY-IW--DGEIKPIAKG-RHWIMGFDVDEIV 313 (347)
T ss_dssp SCEEEEEC--SSCEEESSTTCCS-EEEEEEEETTEEEEEEEE--TTEEEEE-EE--SSSEEEEECS-SSEEEEEEESSSE
T ss_pred cceEEEEC--CCceEeccccCCc-ccCCccEEcCcEEEEEec--CCcEEEE-Ec--CCceEEEecC-CCeEEeeeeeCcE
Confidence 35788898 6765432222111 111112233455555453 44 577 77 5776433322 2233334443434
Q ss_pred EEEEeCceeEeecCCcc
Q 040693 354 IYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 354 lyv~~~~g~~~~~~~~~ 370 (382)
+|+.++.+....+|.++
T Consensus 314 ~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 314 VYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEECSSSCCEEEEES
T ss_pred EEEEcCCCChHHheEeC
Confidence 44455554433556555
No 314
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=91.19 E-value=3.5 Score=40.63 Aligned_cols=100 Identities=10% Similarity=0.102 Sum_probs=53.7
Q ss_pred cEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 206 DIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
.++..++.|+.+..+|..+++..-.+.... .+......+. ++..+..+ ..++.|..+|
T Consensus 324 ~~laS~S~D~tvklWD~~~~~~~~~~~~~~---~~~~v~~v~fsp~~~~l~s~-----------------~~d~tv~lwd 383 (524)
T 2j04_B 324 TVVSTVAVDGYFYIFNPKDIATTKTTVSRF---RGSNLVPVVYCPQIYSYIYS-----------------DGASSLRAVP 383 (524)
T ss_dssp CEEEEEETTSEEEEECGGGHHHHCEEEEEC---SCCSCCCEEEETTTTEEEEE-----------------CSSSEEEEEE
T ss_pred eEEEEeccCCeEEEEECCCCCccccccccc---ccCcccceEeCCCcCeEEEe-----------------CCCCcEEEEE
Confidence 577888899999999998877544332110 0001111222 33343333 2346789999
Q ss_pred CCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCC
Q 040693 284 ASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVK 329 (382)
Q Consensus 284 ~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~ 329 (382)
+++++.+.+....... ...+.+ ++..++.++ .++.|...|+.
T Consensus 384 ~~~~~~~~~l~gH~~~--V~sva~Sp~g~~l~Sgs--~Dgtv~lwd~~ 427 (524)
T 2j04_B 384 SRAAFAVHPLVSRETT--ITAIGVSRLHPMVLAGS--ADGSLIITNAA 427 (524)
T ss_dssp TTCTTCCEEEEECSSC--EEEEECCSSCCBCEEEE--TTTEEECCBSC
T ss_pred CcccccceeeecCCCc--eEEEEeCCCCCeEEEEE--CCCEEEEEech
Confidence 9998876554432211 111111 234455544 37777776654
No 315
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=91.16 E-value=14 Score=37.40 Aligned_cols=141 Identities=15% Similarity=0.129 Sum_probs=73.7
Q ss_pred cEEEEEeCCCCCeeeee-ccCCCCCCCCcccc-eeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcE-Ee
Q 040693 215 GFAWALDRDSGSLIWSM-EAGPGGLGGGAMWG-AATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNV-LW 291 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~-~~~~~~~~g~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~-~W 291 (382)
..++.+|.++++..+.. .... . .... ...+++.+|+.+... .....|+.+|+.+++. .|
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~----~-~~~~~~~~~g~~l~~~t~~~-------------~~~~~l~~~d~~~~~~~~~ 320 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDL----D-ADVSLVDNKGSTLYLLTNRD-------------APNRRLVTVDAANPGPAHW 320 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSS----S-SCEEEEEEETTEEEEEECTT-------------CTTCEEEEEETTSCCGGGC
T ss_pred cEEEEEECCCCCCceEEEeCCC----C-ceEEEEeccCCEEEEEECCC-------------CCCCEEEEEeCCCCCcccc
Confidence 48999999887533332 2211 1 1112 223677777764431 1247899999998864 56
Q ss_pred eecCCCCCCCCcceEEeCCEEEEeeecCCC--cEEEEeCCCCcEeEEEecCCc-eecceEE--eCCEEEEEeCc-eeEee
Q 040693 292 STADPSNGTAPGPVTVANGVLFGGSTYRQG--PIYAMDVKTGKILWSYDTGAT-IYGGASV--SNGCIYMGNGY-KVTVG 365 (382)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g--~l~~ld~~tG~ilw~~~~~~~-~~~~p~~--~~g~lyv~~~~-g~~~~ 365 (382)
+.-.+...... .+...++.+++... .++ .|+.+|.+ |+..-+...+.. ....+.. .++.|++..+. -.-..
T Consensus 321 ~~l~~~~~~~~-~~s~~g~~lv~~~~-~~g~~~l~~~d~~-g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~ 397 (693)
T 3iuj_A 321 RDLIPERQQVL-TVHSGSGYLFAEYM-VDATARVEQFDYE-GKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPT 397 (693)
T ss_dssp EEEECCCSSCE-EEEEETTEEEEEEE-ETTEEEEEEECTT-SCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCE
T ss_pred EEEecCCCCEE-EEEEECCEEEEEEE-ECCeeEEEEEECC-CCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCE
Confidence 64333322122 44445665555443 243 68999987 544555555432 2222222 34566665332 11133
Q ss_pred cCCccCCCCCe
Q 040693 366 FGNKNFTSGTS 376 (382)
Q Consensus 366 ~~~~~~~~g~~ 376 (382)
+|.+|..+|+.
T Consensus 398 l~~~d~~~g~~ 408 (693)
T 3iuj_A 398 LYRFEPKSGAI 408 (693)
T ss_dssp EEEECTTTCCE
T ss_pred EEEEECCCCeE
Confidence 56666666654
No 316
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=89.98 E-value=1.4 Score=43.21 Aligned_cols=154 Identities=11% Similarity=0.042 Sum_probs=76.8
Q ss_pred ecEEEEEcc-CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee---------eCCeEEEEecCccccccccCCCCCCC
Q 040693 205 HDIVVAVQK-SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT---------DERRIYTNIANSQHKNFNLKPSKNST 274 (382)
Q Consensus 205 ~~~v~~~~~-~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~---------~~~~v~~~~~~~~~~~~~~~~~~~~~ 274 (382)
++.||+... .+.+..+|.+++++.--...+.... ......++ +++.+|++....... .
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~--~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~----------~ 218 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPT--NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG----------D 218 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSC--SBEEEEEECCCBTTTBCTTCEEEEEECCCTTG----------G
T ss_pred CCEEEEEECCCCeEEEEECCCCEEEEEEccCcccc--CCCcEEEEeecccccCCCCCEEEEEeCCCCCc----------c
Confidence 344555543 4679999999877664444322111 11222323 455688874431100 0
Q ss_pred CCceEEEEECCC-CcEEe-----eecCCCCCCCCcceEEe--CCEEEEeeecCCCcEEEEeCC-------CCcE------
Q 040693 275 IAGGWVAMDASN-GNVLW-----STADPSNGTAPGPVTVA--NGVLFGGSTYRQGPIYAMDVK-------TGKI------ 333 (382)
Q Consensus 275 ~~g~v~a~d~~t-G~~~W-----~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~g~l~~ld~~-------tG~i------ 333 (382)
....++.++... |+..+ .... .. ...-+.++ ++.||++.. ..+.|+.+|++ +|+.
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~--~p~giavdp~~g~LYvtd~-~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAA-YK--QCNGATIHPINGELYFNSY-EKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEE-ES--CCCCEEECTTTCCEEEEET-TTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred cCceEEEEecCCCCceeecccceeecc-CC--CceEEEEcCCCCeEEEEEC-CCCEEEEEecccccccccCceeeccccc
Confidence 112377777554 44331 1111 11 11222343 578888875 57889999998 6664
Q ss_pred -----eEE-EecCCce-ecceEE--eCCEEEEEeCceeEeecCCccCCCC
Q 040693 334 -----LWS-YDTGATI-YGGASV--SNGCIYMGNGYKVTVGFGNKNFTSG 374 (382)
Q Consensus 334 -----lw~-~~~~~~~-~~~p~~--~~g~lyv~~~~g~~~~~~~~~~~~g 374 (382)
+-+ +.++... -...++ .++.||++....+.+..+.+|..++
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~ 344 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKK 344 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcc
Confidence 112 2232211 123344 2345899987555444444555444
No 317
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=89.82 E-value=18 Score=36.43 Aligned_cols=69 Identities=14% Similarity=-0.010 Sum_probs=44.1
Q ss_pred eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeC
Q 040693 249 DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDV 328 (382)
Q Consensus 249 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~ 328 (382)
+++.||+... ..+.|..+|...+...- ..... ...-.+.+.++.+|++.. ..+.|+.+|.
T Consensus 176 ~~~~LY~aD~----------------~~~~I~~~d~dG~~~~v-~~~~l--~~P~glav~~~~ly~tD~-~~~~I~~~dk 235 (628)
T 4a0p_A 176 AKRRLYWTDL----------------DTNLIESSNMLGLNREV-IADDL--PHPFGLTQYQDYIYWTDW-SRRSIERANK 235 (628)
T ss_dssp TTTEEEEEET----------------TTTEEEEEETTSCSCEE-EEECC--SCEEEEEEETTEEEEEET-TTTEEEEEET
T ss_pred ccCEEEEEEC----------------CCCEEEEEcCCCCceEE-eeccC--CCceEEEEECCEEEEecC-CCCEEEEEEC
Confidence 3688998743 34679999986544321 11111 112245567789999874 5789999999
Q ss_pred CCCcEeEEE
Q 040693 329 KTGKILWSY 337 (382)
Q Consensus 329 ~tG~ilw~~ 337 (382)
.+|+..-.+
T Consensus 236 ~tg~~~~~l 244 (628)
T 4a0p_A 236 TSGQNRTII 244 (628)
T ss_dssp TTCCSCEEE
T ss_pred CCCCceEEE
Confidence 888754443
No 318
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=89.81 E-value=16 Score=35.75 Aligned_cols=26 Identities=4% Similarity=-0.205 Sum_probs=19.1
Q ss_pred CCEEEEeeecCCCcEEEEeCCCCcEeEE
Q 040693 309 NGVLFGGSTYRQGPIYAMDVKTGKILWS 336 (382)
Q Consensus 309 ~~~v~~~~~~~~g~l~~ld~~tG~ilw~ 336 (382)
++.+|++.. .+++|..|++ +|.+..-
T Consensus 390 ~g~lyVaD~-~N~rIr~i~~-~G~v~Ti 415 (496)
T 3kya_A 390 EYDFYFVDR-LNFCVRKVTP-EGIVSTY 415 (496)
T ss_dssp CEEEEEEEG-GGTEEEEECT-TCBEEEE
T ss_pred CCeEEEEEC-CCCEEEEEeC-CCCEEEE
Confidence 468888875 5789999995 6866543
No 319
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=89.56 E-value=5 Score=30.58 Aligned_cols=20 Identities=15% Similarity=0.307 Sum_probs=16.5
Q ss_pred cceEEEEeCccCceeeeeec
Q 040693 54 QGSLAKLDAKTGRILWQTFM 73 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~ 73 (382)
+|.|+.++...++++|....
T Consensus 33 dGNLvL~~~~~~~~vWssnt 52 (113)
T 3mez_B 33 DCNLVLTKGSKTNIVWESGT 52 (113)
T ss_dssp TSCEEEEETTTTEEEEECCC
T ss_pred CCEEEEEECCCCEEEEECCc
Confidence 88898888756899999765
No 320
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=89.06 E-value=20 Score=35.97 Aligned_cols=68 Identities=12% Similarity=0.156 Sum_probs=41.7
Q ss_pred ceEEe--CCEEEEeeecCCCcEEEEeCCCCcEeEEE-ecCCceecceEEeCCEEEEEeCceeEeecCCccCCCCC
Q 040693 304 PVTVA--NGVLFGGSTYRQGPIYAMDVKTGKILWSY-DTGATIYGGASVSNGCIYMGNGYKVTVGFGNKNFTSGT 375 (382)
Q Consensus 304 ~~~~~--~~~v~~~~~~~~g~l~~ld~~tG~ilw~~-~~~~~~~~~p~~~~g~lyv~~~~g~~~~~~~~~~~~g~ 375 (382)
-++++ ++++|++.. ..++|..+|++ |...-.+ ...-..-.+.++.+++||++..... .++.++..+|+
T Consensus 483 GlalD~~~~~LY~aD~-~~~~I~~~~~d-G~~~~~~~~~~l~~P~glav~~~~ly~tD~~~~--~I~~~~k~~g~ 553 (619)
T 3s94_A 483 GLALDYDEGKIYWGDA-KTDKIEVMNTD-GTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRR--SIERVHKRSAE 553 (619)
T ss_dssp EEEEETTTTEEEEEET-TTTEEEEEESS-SCCCEEEEECCCCSSCCEEEETTEEEEECTTSS--CEEEEESSSCC
T ss_pred eeEEcccCCEEEEEEC-CCCEEEEEecC-CCceEEEeccCCCCcEEEEEECCEEEEeecCCC--eEEEEEcCCCc
Confidence 34555 679999875 56789999986 3322222 1111122456778999999986544 34556666664
No 321
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=89.06 E-value=7.6 Score=39.66 Aligned_cols=130 Identities=8% Similarity=-0.084 Sum_probs=70.9
Q ss_pred cEEEEEeCCCCCeeeeecc-CC---CCCCCCcccceeee--CCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCc
Q 040693 215 GFAWALDRDSGSLIWSMEA-GP---GGLGGGAMWGAATD--ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGN 288 (382)
Q Consensus 215 g~l~ald~~tG~~~W~~~~-~~---~~~~g~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~ 288 (382)
..++++|..+++ |+.-. +. ...........++. ++.||+..+..... ...+.++.+|+.+.
T Consensus 412 ~~v~~yd~~~~~--W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~----------~~~~dv~~yd~~t~- 478 (695)
T 2zwa_A 412 NEILQLSIHYDK--IDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPH----------QGLSDNWIFDMKTR- 478 (695)
T ss_dssp CCEEEEEECSSC--EEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTT----------CBCCCCEEEETTTT-
T ss_pred CcEEEEECCCCe--EEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCC----------CccccEEEEeCCCC-
Confidence 458999998764 77644 20 01112223333444 88888874432100 12356899999886
Q ss_pred EEeeec--CCCCCCCCcceEEeCCEEEEeee-cCCCcEEEEeCCCCcEeEEEecC-----Ccee-cceEEeC---CEEEE
Q 040693 289 VLWSTA--DPSNGTAPGPVTVANGVLFGGST-YRQGPIYAMDVKTGKILWSYDTG-----ATIY-GGASVSN---GCIYM 356 (382)
Q Consensus 289 ~~W~~~--~~~~~~~~~~~~~~~~~v~~~~~-~~~g~l~~ld~~tG~ilw~~~~~-----~~~~-~~p~~~~---g~lyv 356 (382)
.|+.- .+.+....+...+.++.+|+... ...+.++++|+.+.+ |+.-.. ..-. .+.++.+ ++||+
T Consensus 479 -~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 479 -EWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp -EEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE--EEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred -cEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc--eEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 57764 33322222333323666666532 112279999998764 876432 1222 2324445 88999
Q ss_pred EeCc
Q 040693 357 GNGY 360 (382)
Q Consensus 357 ~~~~ 360 (382)
..+.
T Consensus 556 ~GG~ 559 (695)
T 2zwa_A 556 LGGG 559 (695)
T ss_dssp ECCB
T ss_pred ECCc
Confidence 8764
No 322
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=87.83 E-value=15 Score=33.12 Aligned_cols=130 Identities=9% Similarity=0.053 Sum_probs=70.8
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEeee
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWST 293 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~~ 293 (382)
...|+.++.+.++ ........ ......+++.||...... .....|+.+++...+ +-+.
T Consensus 87 ~~~Iy~i~~dg~~-~~~l~~~~-------~~~~s~~g~~Iy~~~~~~-------------~~~~~Iy~~~~dGs~-~~~l 144 (302)
T 3s25_A 87 RNSLCRIKRNGHG-STVLDPDP-------CIYASLIGNYIYYLHYDT-------------QTATSLYRIRIDGEE-KKKI 144 (302)
T ss_dssp SEEEEEEETTSCC-CEEEECSC-------EEEEEEETTEEEEEEESS-------------SSCEEEEEEETTSCC-CEEE
T ss_pred CCeEEEEeCCCCc-ceEeecCC-------ccEEEEeCCEEEEEeecC-------------CCCceEEEEECCCCC-eEEE
Confidence 3578999988554 44433211 112334788888864100 224668888886433 3333
Q ss_pred cCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEE-eCCEEEEEeCceeEeecCCccCC
Q 040693 294 ADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASV-SNGCIYMGNGYKVTVGFGNKNFT 372 (382)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~-~~g~lyv~~~~g~~~~~~~~~~~ 372 (382)
.... ..++..+++.+|..+. ....|+.++++.+. ..++- .+.. ..|+. .++.||.+...+. .+++..+..
T Consensus 145 t~~~----~~~~~~~g~~iy~t~~-g~~~Iy~~~l~g~~-~~~l~-~~~~-~~~~~P~g~~iy~t~~~~~-~~I~~~~ld 215 (302)
T 3s25_A 145 KNHY----LFTCNTSDRYFYYNNP-KNGQLYRYDTASQS-EALFY-DCNC-YKPVVLDDTNVYYMDVNRD-NAIVHVNIN 215 (302)
T ss_dssp ESSC----CCCSEEETTEEEEECT-TTCCEEEEETTTTE-EEEEE-CSCE-EEEEEEETTEEEEEEGGGT-TEEEEECSS
T ss_pred eCCC----ceEeeEECCEEEEEeC-CCceEEEEECCCCC-EEEEe-CCCc-cceeeecCCEEEEEEcCCC-cEEEEEECC
Confidence 2221 1344567788887763 46789999987554 23332 2222 23444 7888888765432 334444444
Q ss_pred CC
Q 040693 373 SG 374 (382)
Q Consensus 373 ~g 374 (382)
.+
T Consensus 216 G~ 217 (302)
T 3s25_A 216 NP 217 (302)
T ss_dssp SC
T ss_pred CC
Confidence 33
No 323
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=87.14 E-value=17 Score=32.85 Aligned_cols=122 Identities=12% Similarity=0.094 Sum_probs=61.8
Q ss_pred ecEEEEEc----cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEE
Q 040693 205 HDIVVAVQ----KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWV 280 (382)
Q Consensus 205 ~~~v~~~~----~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~ 280 (382)
++.|+... .+..|+.++.+ |+...+..... .. ....+++.||.... ....|+
T Consensus 115 g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~~~-----~~--~~~~~g~~iy~t~~----------------g~~~Iy 170 (302)
T 3s25_A 115 GNYIYYLHYDTQTATSLYRIRID-GEEKKKIKNHY-----LF--TCNTSDRYFYYNNP----------------KNGQLY 170 (302)
T ss_dssp TTEEEEEEESSSSCEEEEEEETT-SCCCEEEESSC-----CC--CSEEETTEEEEECT----------------TTCCEE
T ss_pred CCEEEEEeecCCCCceEEEEECC-CCCeEEEeCCC-----ce--EeeEECCEEEEEeC----------------CCceEE
Confidence 45565543 46689999987 55444443221 01 12237788887632 235688
Q ss_pred EEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEeCCEEEEE
Q 040693 281 AMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVSNGCIYMG 357 (382)
Q Consensus 281 a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~~g~lyv~ 357 (382)
.+++.+++.. +.. ... ...++.-.++.+|.........|+.++++.+. ...+. ........+.+++||.+
T Consensus 171 ~~~l~g~~~~-~l~-~~~--~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt--~~~~~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 171 RYDTASQSEA-LFY-DCN--CYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLT--EANIEHYNVYGSLIFYQ 240 (302)
T ss_dssp EEETTTTEEE-EEE-CSC--EEEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECS--CSCEEEEEEETTEEEEE
T ss_pred EEECCCCCEE-EEe-CCC--ccceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEe--CCCcceEEECCCEEEEE
Confidence 8887666433 221 111 12233225677777653223467788776433 22221 11112244456666665
No 324
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=83.76 E-value=30 Score=32.71 Aligned_cols=27 Identities=4% Similarity=-0.182 Sum_probs=20.7
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeec
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSME 232 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~ 232 (382)
+..|+++..|+.+..+|.. ++..-.+.
T Consensus 204 g~~lasgs~dg~v~iwd~~-~~~~~~~~ 230 (434)
T 2oit_A 204 GKQLAVGKQNGTVVQYLPT-LQEKKVIP 230 (434)
T ss_dssp SSCEEEEETTSCEEEECTT-CCEEEEEC
T ss_pred CCEEEEEcCCCcEEEEccC-Cccccccc
Confidence 4677888899999999998 76654444
No 325
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=83.32 E-value=8.2 Score=36.72 Aligned_cols=60 Identities=10% Similarity=-0.002 Sum_probs=37.9
Q ss_pred CCceEEEEECCCCcEEeeecCCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCCCCcEeEEEec
Q 040693 275 IAGGWVAMDASNGNVLWSTADPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVKTGKILWSYDT 339 (382)
Q Consensus 275 ~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~ 339 (382)
.++.|..+|+++++........... ...+.. ++.+++.++ .++.|..+|.+ ++..-....
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~--v~~v~wspdg~~lasgs--~dg~v~iwd~~-~~~~~~~~~ 231 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVA--VTSVCWSPKGKQLAVGK--QNGTVVQYLPT-LQEKKVIPC 231 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGC--EEEEEECTTSSCEEEEE--TTSCEEEECTT-CCEEEEECC
T ss_pred CCCeEEEEEcCCCcceeeccCCCCc--eeEEEEcCCCCEEEEEc--CCCcEEEEccC-CcccccccC
Confidence 4588999999999766544322111 112222 345677776 48999999998 766555543
No 326
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=82.52 E-value=24 Score=32.53 Aligned_cols=138 Identities=16% Similarity=0.271 Sum_probs=69.2
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeee-eeccCCCCCCCCcccceeee-----CCeEEEEecC-ccccccccCCCCCCCCCc
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIW-SMEAGPGGLGGGAMWGAATD-----ERRIYTNIAN-SQHKNFNLKPSKNSTIAG 277 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W-~~~~~~~~~~g~~~~~~~~~-----~~~v~~~~~~-~~~~~~~~~~~~~~~~~g 277 (382)
++.|++....|.|+.+| .+|+... ..+... .......+.+++ ++.||+.... ... .....
T Consensus 39 dG~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~--~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~----------~~~~~ 105 (354)
T 3a9g_A 39 GGRYLVTERPGRLVLIS-PSGKKLVASFDVAN--VGEAGLLGLALHPEFPKKSWVYLYASYFAEG----------GHIRN 105 (354)
T ss_dssp TTEEEEEETTTEEEEEC-SSCEEEEEECCCCC--STTCSEEEEEECTTTTTSCEEEEEEEEECGG----------GCEEE
T ss_pred CCeEEEEeCCCEEEEEe-CCCceEeeccceee--cCCCceeeEEeCCCCCcCCEEEEEEeccCCC----------CCcce
Confidence 34577887789999998 4575111 111100 001122333443 5789987431 000 00125
Q ss_pred eEEEEECCCC-------cEEee-ecCCCCCCCCcceEEe-CCEEEEeeec------------CCCcEEEEeCCCCc----
Q 040693 278 GWVAMDASNG-------NVLWS-TADPSNGTAPGPVTVA-NGVLFGGSTY------------RQGPIYAMDVKTGK---- 332 (382)
Q Consensus 278 ~v~a~d~~tG-------~~~W~-~~~~~~~~~~~~~~~~-~~~v~~~~~~------------~~g~l~~ld~~tG~---- 332 (382)
.|..++...+ ++++. .+. ........+.+. ++.+|++... ..|+|+.||++ |+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~-~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~ 183 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPG-AYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPAD 183 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEEC-CSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTT
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCC-CCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCC
Confidence 6888887655 22332 221 111223445564 5788887531 13679999876 54
Q ss_pred ------EeEEEecCCceecceEEe--CCEEEEEeC
Q 040693 333 ------ILWSYDTGATIYGGASVS--NGCIYMGNG 359 (382)
Q Consensus 333 ------ilw~~~~~~~~~~~p~~~--~g~lyv~~~ 359 (382)
.+|..-+..+ ...++. +++||++..
T Consensus 184 npf~~~~i~a~G~rnp--~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 184 NPFPNSPIWSYGHRNP--QGIDWHRASGVMVATEH 216 (354)
T ss_dssp SSSTTCCEEEECCSCC--CEEEECTTTCCEEEEEC
T ss_pred CCCCCCcEEEEccCCc--ceEEEeCCCCCEEEEec
Confidence 4554432211 123333 578888764
No 327
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=82.46 E-value=25 Score=30.92 Aligned_cols=30 Identities=3% Similarity=0.212 Sum_probs=24.1
Q ss_pred cCEEEEeccCccccccccccccccceEEEEeCccCceeeeeecc
Q 040693 31 KGAYYVGTSSIEEGLTFELCCTFQGSLAKLDAKTGRILWQTFML 74 (382)
Q Consensus 31 ~~~v~v~~~~~~~~~~~~~~~~~~g~l~ald~~tG~~lW~~~~~ 74 (382)
++++|+.... ++.|+.||+. |+++.+..+.
T Consensus 38 ~~~L~aV~d~-------------~~~I~~ld~~-g~v~~~i~l~ 67 (255)
T 3qqz_A 38 SNTLFSTINK-------------PAAIVEMTTN-GDLIRTIPLD 67 (255)
T ss_dssp TTEEEEEEET-------------TEEEEEEETT-CCEEEEEECS
T ss_pred CCEEEEEECC-------------CCeEEEEeCC-CCEEEEEecC
Confidence 4789986653 7899999996 9998888763
No 328
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=79.55 E-value=18 Score=27.37 Aligned_cols=22 Identities=14% Similarity=0.048 Sum_probs=16.5
Q ss_pred EccCcEEEEEeCCCCCeeeeecc
Q 040693 211 VQKSGFAWALDRDSGSLIWSMEA 233 (382)
Q Consensus 211 ~~~~g~l~ald~~tG~~~W~~~~ 233 (382)
-..+|.++.+|. +++.+|+...
T Consensus 63 l~~dGNLVl~d~-~~~~iW~S~t 84 (113)
T 3mez_B 63 LGHSGELDITDD-RLNTVFVSNT 84 (113)
T ss_dssp ECTTSCEEEECT-TSCEEEECSC
T ss_pred EeCCCcEEEECC-CCCEEEECCC
Confidence 345788888886 4789999764
No 329
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=78.88 E-value=12 Score=28.18 Aligned_cols=18 Identities=22% Similarity=0.409 Sum_probs=14.0
Q ss_pred cceEEEEeCccCceeeeeec
Q 040693 54 QGSLAKLDAKTGRILWQTFM 73 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~ 73 (382)
+|.++.++. ++++|..+.
T Consensus 28 dgnlvl~~~--~~~vW~sn~ 45 (112)
T 1xd5_A 28 DCNLVLYDN--NRAVWASGT 45 (112)
T ss_dssp TSCEEEEET--TEEEEECCC
T ss_pred CCcEEEEEC--CEEEEeCCC
Confidence 777877775 789999765
No 330
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=78.68 E-value=8.4 Score=33.53 Aligned_cols=57 Identities=16% Similarity=0.212 Sum_probs=31.1
Q ss_pred CCCceEEEEECCCCcEEeeecCCCC--CCC-CcceEEe-CC----EEEEeeecCCCcEEEEeCCCCcEeEEE
Q 040693 274 TIAGGWVAMDASNGNVLWSTADPSN--GTA-PGPVTVA-NG----VLFGGSTYRQGPIYAMDVKTGKILWSY 337 (382)
Q Consensus 274 ~~~g~v~a~d~~tG~~~W~~~~~~~--~~~-~~~~~~~-~~----~v~~~~~~~~g~l~~ld~~tG~ilw~~ 337 (382)
...|.|+|+. .|++.+ ...|.. ..+ .....+. .+ ++++.+ .+|.|++++ +|++.+..
T Consensus 143 ~p~G~Lyav~--dg~lyr-~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~--~~G~l~~v~--~g~~Y~~~ 207 (236)
T 1tl2_A 143 HPNGYLYAVH--GQQFYK-ALPPVSNQDNWLARATKIGQGGWDTFKFLFFS--SVGTLFGVQ--GGKFYEDY 207 (236)
T ss_dssp CTTSCEEEEE--TTEEEE-ECCCSSTTCCHHHHCEEEESSSGGGEEEEEEC--TTSCEEEEE--TTEEEEES
T ss_pred CCCceEEEEe--CCcEEe-cCCCCCCCcccccccceeccCCcceEEEEEEC--CCCcEEEEe--CCeEEecC
Confidence 4568899999 677433 332221 111 1122232 22 344444 489999999 68766553
No 331
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=77.89 E-value=14 Score=27.75 Aligned_cols=18 Identities=17% Similarity=0.488 Sum_probs=14.7
Q ss_pred cceEEEEeCccCceeeeeec
Q 040693 54 QGSLAKLDAKTGRILWQTFM 73 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~ 73 (382)
+|.++.+| .++++|..+.
T Consensus 29 dGnlvl~~--~~~~vW~sn~ 46 (110)
T 3a0c_A 29 DCNFVLYD--SGKPVWASNT 46 (110)
T ss_dssp TSCEEEEE--TTEEEEECCC
T ss_pred CCcEEEEE--CCEEEEECCC
Confidence 78888888 5899999765
No 332
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=77.52 E-value=6.5 Score=37.05 Aligned_cols=61 Identities=16% Similarity=0.181 Sum_probs=44.8
Q ss_pred CceEEEEECCCC--cEEeeecCCCCCCC----CcceEEe---------CCEEEEeeecCCCcEEEEeCCCCcEeEEEe
Q 040693 276 AGGWVAMDASNG--NVLWSTADPSNGTA----PGPVTVA---------NGVLFGGSTYRQGPIYAMDVKTGKILWSYD 338 (382)
Q Consensus 276 ~g~v~a~d~~tG--~~~W~~~~~~~~~~----~~~~~~~---------~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~ 338 (382)
.-+|++||++|+ +++-++.++..... ...+.++ ++.+|++.. ....|+++|.++|+ -||+.
T Consensus 122 ~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~-~~~gLIVydl~~~~-swRv~ 197 (381)
T 3q6k_A 122 RPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNF-LRGALFIYDHKKQD-SWNVT 197 (381)
T ss_dssp CCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEET-TTTEEEEEETTTTE-EEEEE
T ss_pred CceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcC-CCCcEEEEECCCCc-EEEEc
Confidence 357999999999 99999998753221 1234455 568999885 46789999999776 56765
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=77.46 E-value=14 Score=35.52 Aligned_cols=84 Identities=17% Similarity=0.178 Sum_probs=44.0
Q ss_pred ceEEEEECCCCcEEeeecCCCCC----CCCc--ceEEe-----CCEEEEeeecC-----------CCcEEEEeCCCC---
Q 040693 277 GGWVAMDASNGNVLWSTADPSNG----TAPG--PVTVA-----NGVLFGGSTYR-----------QGPIYAMDVKTG--- 331 (382)
Q Consensus 277 g~v~a~d~~tG~~~W~~~~~~~~----~~~~--~~~~~-----~~~v~~~~~~~-----------~g~l~~ld~~tG--- 331 (382)
++|+.++..+|+..=...++... ...+ -+++. ++.+|+..... ...|+.++.+.+
T Consensus 48 g~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~ 127 (454)
T 1cru_A 48 GKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDT 127 (454)
T ss_dssp CEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTE
T ss_pred CEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCC
Confidence 46999988778653222222210 0112 23455 78888876410 246887775432
Q ss_pred ----cEeEE-EecCCceecce-EE-eCCEEEEEeCc
Q 040693 332 ----KILWS-YDTGATIYGGA-SV-SNGCIYMGNGY 360 (382)
Q Consensus 332 ----~ilw~-~~~~~~~~~~p-~~-~~g~lyv~~~~ 360 (382)
+++++ .+....+...- ++ .+|+||++.++
T Consensus 128 ~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 128 LEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 33443 22222233333 33 47899999765
No 334
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=77.19 E-value=17 Score=27.28 Aligned_cols=18 Identities=22% Similarity=0.416 Sum_probs=14.4
Q ss_pred cceEEEEeCccCceeeeeec
Q 040693 54 QGSLAKLDAKTGRILWQTFM 73 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~ 73 (382)
+|.++.++. ++++|....
T Consensus 28 dGnLvly~~--~~~vW~snt 45 (109)
T 3dzw_A 28 DCNLVLYDV--DKPIWATNT 45 (109)
T ss_dssp TSCEEEEET--TEEEEECCC
T ss_pred CCcEEEEeC--CEEEEECCc
Confidence 788888875 789999765
No 335
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=77.10 E-value=29 Score=31.96 Aligned_cols=93 Identities=15% Similarity=0.192 Sum_probs=49.1
Q ss_pred eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe-eecCCCCCCCCcc--eEEe-----CCEEEEeeec--
Q 040693 249 DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW-STADPSNGTAPGP--VTVA-----NGVLFGGSTY-- 318 (382)
Q Consensus 249 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W-~~~~~~~~~~~~~--~~~~-----~~~v~~~~~~-- 318 (382)
.++.+|++ ...+.|+.+| .+|+... ..+... .....+ +.+. ++.+|+....
T Consensus 38 pdG~l~V~-----------------e~~g~I~~~d-~~G~~~~~~~~v~~-~g~~g~~gia~~pdf~~~g~lyv~~~~~~ 98 (354)
T 3a9g_A 38 GGGRYLVT-----------------ERPGRLVLIS-PSGKKLVASFDVAN-VGEAGLLGLALHPEFPKKSWVYLYASYFA 98 (354)
T ss_dssp ETTEEEEE-----------------ETTTEEEEEC-SSCEEEEEECCCCC-STTCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCeEEEE-----------------eCCCEEEEEe-CCCceEeeccceee-cCCCceeeEEeCCCCCcCCEEEEEEeccC
Confidence 35778887 3448899997 5676221 111101 011222 3343 4689987641
Q ss_pred CC----CcEEEEeCCCC-------cEeEE-EecCCcee-cceEE-eCCEEEEEeCc
Q 040693 319 RQ----GPIYAMDVKTG-------KILWS-YDTGATIY-GGASV-SNGCIYMGNGY 360 (382)
Q Consensus 319 ~~----g~l~~ld~~tG-------~ilw~-~~~~~~~~-~~p~~-~~g~lyv~~~~ 360 (382)
.+ .+|..++.+.+ +++.. ++...... ...++ .+|+||++.++
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 99 EGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp GGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred CCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 12 67899987654 22332 33222222 23333 47899999754
No 336
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=76.88 E-value=21 Score=26.78 Aligned_cols=21 Identities=19% Similarity=0.379 Sum_probs=16.0
Q ss_pred EccCcEEEEEeCCCCCeeeeecc
Q 040693 211 VQKSGFAWALDRDSGSLIWSMEA 233 (382)
Q Consensus 211 ~~~~g~l~ald~~tG~~~W~~~~ 233 (382)
-..+|.++.+| .++++|+...
T Consensus 56 l~~~GNLvl~d--~~~~~W~S~~ 76 (112)
T 1xd5_A 56 MQNDGNLVIYS--GSRAIWASNT 76 (112)
T ss_dssp ECTTSCEEEEE--TTEEEEECCC
T ss_pred EeCCCCEEEEc--CCEEEEECCc
Confidence 34678888888 6889999653
No 337
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=72.53 E-value=20 Score=33.13 Aligned_cols=58 Identities=24% Similarity=0.482 Sum_probs=43.0
Q ss_pred eecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 204 KHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 204 ~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
..++||.-++-|.++.+|.+||..+...+... ..+|++..+ ...+.+.+++
T Consensus 270 kygviyviTK~G~ihlyDleTgt~i~~nrIS~---------------d~iF~ta~~--------------~~~~Gi~~Vn 320 (365)
T 2xzh_A 270 KHDVVFLITKYGYIHLYDLETGTCIYMNRISG---------------ETIFVTAPH--------------EATAGIIGVN 320 (365)
T ss_dssp TTTEEEEEETTSEEEEEETTTCCEEEEEECCS---------------SCEEEEEEE--------------GGGTEEEEEE
T ss_pred cCCEEEEEeCCcEEEEEEcccCcEEEEeccCC---------------CceEEeccc--------------CCCCcEEEEc
Confidence 36899999999999999999999999988643 456665443 2345677777
Q ss_pred CCCCcEEe
Q 040693 284 ASNGNVLW 291 (382)
Q Consensus 284 ~~tG~~~W 291 (382)
+.|+++-
T Consensus 321 -r~GqVl~ 327 (365)
T 2xzh_A 321 -RKGQVLS 327 (365)
T ss_dssp -TTCEEEE
T ss_pred -CCCEEEE
Confidence 5566653
No 338
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=71.62 E-value=29 Score=25.96 Aligned_cols=22 Identities=23% Similarity=0.510 Sum_probs=16.6
Q ss_pred EccCcEEEEEeCCCCCeeeeecc
Q 040693 211 VQKSGFAWALDRDSGSLIWSMEA 233 (382)
Q Consensus 211 ~~~~g~l~ald~~tG~~~W~~~~ 233 (382)
-..+|.++.+|. +|+++|+...
T Consensus 57 l~~dGNLVl~~~-~~~~~W~S~t 78 (110)
T 3a0c_A 57 LHNNGNLVIYDQ-SNRVIWQTKT 78 (110)
T ss_dssp ECTTSCEEEECT-TCCEEEECCC
T ss_pred EeCCCCEEEECC-CCcEEEecCC
Confidence 345788888886 5899999654
No 339
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=71.59 E-value=34 Score=29.71 Aligned_cols=15 Identities=20% Similarity=0.339 Sum_probs=11.1
Q ss_pred CCCcEEEEeCCCCcEeE
Q 040693 319 RQGPIYAMDVKTGKILW 335 (382)
Q Consensus 319 ~~g~l~~ld~~tG~ilw 335 (382)
.+|.|||++ +|++..
T Consensus 144 p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 144 PNGYLYAVH--GQQFYK 158 (236)
T ss_dssp TTSCEEEEE--TTEEEE
T ss_pred CCceEEEEe--CCcEEe
Confidence 389999999 577433
No 340
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=71.41 E-value=61 Score=29.55 Aligned_cols=110 Identities=15% Similarity=0.193 Sum_probs=55.3
Q ss_pred EEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeee-----CCeEEEEecCccccccccCCCCCCCCCceEEE
Q 040693 207 IVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATD-----ERRIYTNIANSQHKNFNLKPSKNSTIAGGWVA 281 (382)
Q Consensus 207 ~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a 281 (382)
.|++....|.|+.++ +|+..=....+..........+.+.+ ++.||+....... .....|..
T Consensus 43 ~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~-----------~~~~~v~r 109 (352)
T 2ism_A 43 GMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEG-----------GLRNQVVR 109 (352)
T ss_dssp CEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTT-----------SSEEEEEE
T ss_pred eEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCC-----------CCccEEEE
Confidence 467777779999998 56421111111000001122333343 4689987432100 01256888
Q ss_pred EECCCCc-----EEee-ecC-CCCCCCCcceEEe-CCEEEEeeec------------CCCcEEEEeCC
Q 040693 282 MDASNGN-----VLWS-TAD-PSNGTAPGPVTVA-NGVLFGGSTY------------RQGPIYAMDVK 329 (382)
Q Consensus 282 ~d~~tG~-----~~W~-~~~-~~~~~~~~~~~~~-~~~v~~~~~~------------~~g~l~~ld~~ 329 (382)
++..+++ .+.+ .+. .........+.++ ++.+|++... ..|.|+.||++
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~d 177 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPE 177 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTT
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCC
Confidence 8887552 2333 221 1111223455554 5788887531 13688889876
No 341
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*
Probab=70.19 E-value=58 Score=28.89 Aligned_cols=51 Identities=24% Similarity=0.449 Sum_probs=28.0
Q ss_pred CceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecC
Q 040693 276 AGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTG 340 (382)
Q Consensus 276 ~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~ 340 (382)
++.++.++. ..++.|+...... .+ ..+.+ . .+|.++.+|.. ++++|.....
T Consensus 173 dGnlvLy~~-~~~~yW~Sgt~~~----~~-----~~l~l-~--~dGnLvl~d~~-~~~vWsS~t~ 223 (276)
T 3m7h_A 173 DGNLVAYGP-NGAATWNAGTQGK----GA-----VRAVF-Q--GDGNLVVYGAG-NAVLWHSHTG 223 (276)
T ss_dssp TSCEEEECT-TSSEEEECCCTTT----TC-----CEEEE-C--TTSCEEEECTT-SCEEEECSCT
T ss_pred CceEEEEeC-CCeEEEECCCCCC----cc-----EEEEE-c--CCCeEEEEeCC-CcEEEEecCC
Confidence 355665542 3588898653221 11 12222 2 36788877754 5788876654
No 342
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=68.93 E-value=33 Score=25.48 Aligned_cols=23 Identities=22% Similarity=0.456 Sum_probs=17.3
Q ss_pred EEccCcEEEEEeCCCCCeeeeecc
Q 040693 210 AVQKSGFAWALDRDSGSLIWSMEA 233 (382)
Q Consensus 210 ~~~~~g~l~ald~~tG~~~W~~~~ 233 (382)
.-..||.++.+|.. |+++|+...
T Consensus 56 ~l~~dGnLvL~d~~-~~~vWss~t 78 (105)
T 4h3o_A 56 VLQSDGNFVVYDSS-GRSLWASHS 78 (105)
T ss_dssp EECTTSCEEEECTT-CCEEEECCC
T ss_pred EEeCCccEEEECCC-cEEEEEecC
Confidence 33567889888864 899998764
No 343
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=68.64 E-value=33 Score=25.44 Aligned_cols=19 Identities=16% Similarity=0.532 Sum_probs=14.8
Q ss_pred cceEEEEECCCCcEEEEEec
Q 040693 142 SNSLLALDLDTGKIVWYKQL 161 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~ 161 (382)
+|.++.+|. +|+++|+...
T Consensus 60 dGnLvL~d~-~~~~vWss~t 78 (105)
T 4h3o_A 60 DGNFVVYDS-SGRSLWASHS 78 (105)
T ss_dssp TSCEEEECT-TCCEEEECCC
T ss_pred CccEEEECC-CcEEEEEecC
Confidence 378888885 6999998654
No 344
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=67.01 E-value=40 Score=25.68 Aligned_cols=17 Identities=18% Similarity=0.372 Sum_probs=13.6
Q ss_pred ceEEEEECCCCcEEEEEe
Q 040693 143 NSLLALDLDTGKIVWYKQ 160 (382)
Q Consensus 143 g~v~ald~~tG~~~W~~~ 160 (382)
|.++..|. +|+++|+..
T Consensus 71 GNLVl~d~-~~~~lW~S~ 87 (119)
T 1b2p_A 71 GVLVVITN-ENVTVWQSP 87 (119)
T ss_dssp SCEEEECT-TCCEEEECS
T ss_pred CEEEEEeC-CCcEEEcCC
Confidence 77888884 699999864
No 345
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=65.54 E-value=86 Score=29.01 Aligned_cols=53 Identities=17% Similarity=0.113 Sum_probs=38.2
Q ss_pred CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceec--ceEEeCCEEEEEeCceeE
Q 040693 309 NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYG--GASVSNGCIYMGNGYKVT 363 (382)
Q Consensus 309 ~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~--~p~~~~g~lyv~~~~g~~ 363 (382)
.+.+|+.+ .-|.||.+|+.||..+.+..+...... ++--..+.++..+..|.+
T Consensus 271 ygviyviT--K~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 271 HDVVFLIT--KYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 325 (365)
T ss_dssp TTEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEE
T ss_pred CCEEEEEe--CCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEE
Confidence 47999999 589999999999999999998764222 222234556666666554
No 346
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=64.82 E-value=74 Score=30.37 Aligned_cols=108 Identities=12% Similarity=0.066 Sum_probs=49.8
Q ss_pred cEEEEEccCc-EEEEEeCCCCCeeeeeccCCCCC---CCCcccceeee-----CCeEEEEecCccccccccCCCCCCCCC
Q 040693 206 DIVVAVQKSG-FAWALDRDSGSLIWSMEAGPGGL---GGGAMWGAATD-----ERRIYTNIANSQHKNFNLKPSKNSTIA 276 (382)
Q Consensus 206 ~~v~~~~~~g-~l~ald~~tG~~~W~~~~~~~~~---~g~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~ 276 (382)
+.|++....+ .|+.++..+|+..-......... ......+.+.+ ++.||+........ .........
T Consensus 38 G~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~----~~~~~~~~~ 113 (454)
T 1cru_A 38 NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK----STDKELPNQ 113 (454)
T ss_dssp SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT----C--CCSCEE
T ss_pred CcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC----CCccccccc
Confidence 3466666664 79999887776532222221100 01122334444 88999985421000 000000012
Q ss_pred ceEEEEECCCC-------cEEeeecCCCCCCCCcceEEe-CCEEEEeee
Q 040693 277 GGWVAMDASNG-------NVLWSTADPSNGTAPGPVTVA-NGVLFGGST 317 (382)
Q Consensus 277 g~v~a~d~~tG-------~~~W~~~~~~~~~~~~~~~~~-~~~v~~~~~ 317 (382)
..|+.++...+ +++++.-..........+.++ ++.+|++..
T Consensus 114 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 114 TIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 46777776433 234431111112234555564 578888753
No 347
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=64.21 E-value=1.2e+02 Score=30.18 Aligned_cols=141 Identities=9% Similarity=-0.007 Sum_probs=75.1
Q ss_pred ecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEE
Q 040693 205 HDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAM 282 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~ 282 (382)
+..|.+++.+|.+..+|.++ ++..-..............+. ++..++++ ..+|+|..+
T Consensus 97 G~~LAs~s~dg~V~iwd~~~---~l~~l~~~~~~~~~sv~svafSPDG~~LAsg-----------------s~DGtVkIW 156 (588)
T 2j04_A 97 DDWMAVLSNNGNVSVFKDNK---MLTNLDSKGNLSSRTYHCFEWNPIESSIVVG-----------------NEDGELQFF 156 (588)
T ss_dssp SSCEEEEETTSCEEEEETTE---EEEECCCSSCSTTTCEEEEEECSSSSCEEEE-----------------ETTSEEEEE
T ss_pred CCEEEEEeCCCcEEEEeCCc---eeeeccCCCccccccEEEEEEcCCCCEEEEE-----------------cCCCEEEEE
Confidence 36677888899999999653 333311211001111222222 77777777 456999999
Q ss_pred ECCCCcE-------EeeecCCCC--CCCCcceEEe-CCEEEEeeecCCCcEEEEeCCCCcEe--EE-Ee-cCCceecceE
Q 040693 283 DASNGNV-------LWSTADPSN--GTAPGPVTVA-NGVLFGGSTYRQGPIYAMDVKTGKIL--WS-YD-TGATIYGGAS 348 (382)
Q Consensus 283 d~~tG~~-------~W~~~~~~~--~~~~~~~~~~-~~~v~~~~~~~~g~l~~ld~~tG~il--w~-~~-~~~~~~~~p~ 348 (382)
|+++++. +-+...... ..+...+... ++ +.+++ .++.++..|.++++.. ++ .. .......+..
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass--~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva 233 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAAL--SNNSVFSMTVSASSHQPVSRMIQNASRRKITDLK 233 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEE--TTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEE
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEe--CCCeEEEEECCCCccccceeeecccccCcEEEEE
Confidence 9999863 334322111 1122222233 45 54545 4899999999887742 32 22 2222334444
Q ss_pred EeCCEEEEEeCceeEeecCCcc
Q 040693 349 VSNGCIYMGNGYKVTVGFGNKN 370 (382)
Q Consensus 349 ~~~g~lyv~~~~g~~~~~~~~~ 370 (382)
..+..|..+ +++ .+.+|.+.
T Consensus 234 Fsg~~LASa-~~~-tIkLWd~~ 253 (588)
T 2j04_A 234 IVDYKVVLT-CPG-YVHKIDLK 253 (588)
T ss_dssp EETTEEEEE-CSS-EEEEEETT
T ss_pred EECCEEEEE-eCC-eEEEEECC
Confidence 444444444 443 45666544
No 348
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=64.19 E-value=41 Score=32.42 Aligned_cols=74 Identities=22% Similarity=0.448 Sum_probs=0.0
Q ss_pred CCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCcccc
Q 040693 184 SPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHK 263 (382)
Q Consensus 184 ~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~ 263 (382)
.|+-....-|+...++ ...++||.-++-|.++.+|.+||..+...+... ..+|++..+
T Consensus 252 fppe~~~DFPvamqvs---~kygviyviTK~G~i~lyDleTgt~i~~nrIs~---------------~~iF~t~~~---- 309 (494)
T 1bpo_A 252 FPPEAQNDFPVAMQIS---EKHDVVFLITKYGYIHLYDLETGTCIYMNRISG---------------ETIFVTAPH---- 309 (494)
T ss_dssp CCTTSTTCCEEEEEEE---TTTTEEEEEETTSEEEEEETTTCCEEEEEECCS---------------SCEEEEEEE----
T ss_pred CCcccccCceeEEEec---ccCCEEEEEecCceEEEEecccceeeeeecccC---------------CceEEeccc----
Q ss_pred ccccCCCCCCCCCceEEEEECCCCcEE
Q 040693 264 NFNLKPSKNSTIAGGWVAMDASNGNVL 290 (382)
Q Consensus 264 ~~~~~~~~~~~~~g~v~a~d~~tG~~~ 290 (382)
...+.+.+++ +.|+++
T Consensus 310 ----------~~~~Gi~~Vn-r~GqVl 325 (494)
T 1bpo_A 310 ----------EATAGIIGVN-RKGQVL 325 (494)
T ss_dssp ----------TTTTEEEEEE-TTCEEE
T ss_pred ----------CCCCcEEEEc-cCceEE
No 349
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=63.16 E-value=35 Score=25.57 Aligned_cols=18 Identities=22% Similarity=0.326 Sum_probs=14.0
Q ss_pred ceEEEEECCCCcEEEEEec
Q 040693 143 NSLLALDLDTGKIVWYKQL 161 (382)
Q Consensus 143 g~v~ald~~tG~~~W~~~~ 161 (382)
|.|+.+|. +|+++|+...
T Consensus 64 GNLvl~d~-~~~~iW~S~t 81 (110)
T 3r0e_B 64 GELIIKDD-DFKTIWSSRS 81 (110)
T ss_dssp SCEEEECT-TCCEEEECCC
T ss_pred CcEEEEeC-CCCEEEEcCC
Confidence 77888885 6899998654
No 350
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=62.28 E-value=1.4e+02 Score=30.35 Aligned_cols=146 Identities=12% Similarity=0.067 Sum_probs=69.1
Q ss_pred CcEEEEEeCCCCCeee--eeccCCCCCCCCccccee-eeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE
Q 040693 214 SGFAWALDRDSGSLIW--SMEAGPGGLGGGAMWGAA-TDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL 290 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W--~~~~~~~~~~g~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~ 290 (382)
...++.+|.++++..+ +.-... .....+.+. ..++.+|+.+.... .....|+.+|..++ ..
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~---~~~~~~s~~~~~g~~l~~~t~~~~------------a~~~~L~~~d~~~~-~~ 357 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPR---EKGVRYDVQMHGTSHLVILTNEGG------------AVNHKLLIAPRGQP-SD 357 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCC---CTTCCEEEEEETTTEEEEEECTTT------------CTTCEEEEEETTST-TC
T ss_pred CceEEEEECCCCCCCceeEEeecC---CCCceEEEeeeeCCEEEEEeCCCC------------CCCcEEEEEcCCCc-cc
Confidence 4579999998874333 211110 112333333 24777777644310 12357999998764 23
Q ss_pred eee-cCCCCC-CCCcceEEeCCEEEEeeecCCC--cEEEEeC-------CCCcEeEEEecCCce-ecce------EEeCC
Q 040693 291 WST-ADPSNG-TAPGPVTVANGVLFGGSTYRQG--PIYAMDV-------KTGKILWSYDTGATI-YGGA------SVSNG 352 (382)
Q Consensus 291 W~~-~~~~~~-~~~~~~~~~~~~v~~~~~~~~g--~l~~ld~-------~tG~ilw~~~~~~~~-~~~p------~~~~g 352 (382)
|+. -++... .....+...++.+++... .++ .|+.+|+ ++|+.+.++..+... ...+ ...++
T Consensus 358 ~~~~li~~~~~~~l~~~~~~~~~lv~~~~-~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~ 436 (751)
T 2xe4_A 358 WSHVLVDHSEDVFMESIAVRSNYLVVAGR-RAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEP 436 (751)
T ss_dssp CCCEEECCCSSEEEEEEEECSSEEEEEEE-ETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCS
T ss_pred ceeeEECCCCCcEEEEEEEECCEEEEEEE-eCCEEEEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCC
Confidence 433 222111 111223334555554432 244 6888896 455524455444321 1111 22344
Q ss_pred EEEEE-eCceeEeecCCccCCCCCe
Q 040693 353 CIYMG-NGYKVTVGFGNKNFTSGTS 376 (382)
Q Consensus 353 ~lyv~-~~~g~~~~~~~~~~~~g~~ 376 (382)
.+++. ++.-.-..+|.++..+|+.
T Consensus 437 ~l~~~~ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 437 TFRMEYSSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp CEEEEEEETTEEEEEEEECTTTCCE
T ss_pred EEEEEEeCCCCCCEEEEEECCCCcE
Confidence 45443 3433334566677766764
No 351
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=59.63 E-value=38 Score=23.50 Aligned_cols=62 Identities=18% Similarity=0.196 Sum_probs=39.7
Q ss_pred ccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 212 QKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 212 ~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
+.+|.+|=++..||+..|..+..... .....+...+-..+. +..|.++-++..|++..|
T Consensus 12 ~~~G~~YYyN~~T~~s~We~P~~~~~---~~e~~~~~~~W~~~~------------------~~~Gr~YyyN~~T~~s~W 70 (75)
T 2jxw_A 12 TSEGYHYYYDLISGASQWEKPEGFQG---DLKKTAVKTVWVEGL------------------SEDGFTYYYNTETGESRW 70 (75)
T ss_dssp ETTTEEEEEETTTTEEECSCCSSCSS---CCSSSSCCCSEEEEE------------------ETTTEEEEEETTTTEEES
T ss_pred CCCCCEEEEECCCCCEeecCCCcccc---cccccCCCccEEEEE------------------CCCCCEEEEECcCCCEec
Confidence 34699999999999999998743210 000001111222333 235888999999999999
Q ss_pred eec
Q 040693 292 STA 294 (382)
Q Consensus 292 ~~~ 294 (382)
+.+
T Consensus 71 e~P 73 (75)
T 2jxw_A 71 EKP 73 (75)
T ss_dssp SCC
T ss_pred cCc
Confidence 865
No 352
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=57.76 E-value=57 Score=24.43 Aligned_cols=17 Identities=24% Similarity=0.403 Sum_probs=13.6
Q ss_pred ceEEEEECCCCcEEEEEe
Q 040693 143 NSLLALDLDTGKIVWYKQ 160 (382)
Q Consensus 143 g~v~ald~~tG~~~W~~~ 160 (382)
|.|+..|. +|+++|+..
T Consensus 61 GnLvl~d~-~~~~vW~S~ 77 (115)
T 2dpf_A 61 GNLVIYDH-NNNDVWGSA 77 (115)
T ss_dssp SCEEEECT-TCCEEEECC
T ss_pred CcEEEECC-CceEEEEcC
Confidence 78888885 699999853
No 353
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=56.86 E-value=23 Score=24.68 Aligned_cols=60 Identities=22% Similarity=0.298 Sum_probs=39.5
Q ss_pred CceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEe
Q 040693 276 AGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYD 338 (382)
Q Consensus 276 ~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~ 338 (382)
.|.++-++..|++..|+.+........ ......+-.-..+ .+|+.|-+|..|++-.|..+
T Consensus 14 ~G~~YYyN~~T~~s~We~P~~~~~~~e-~~~~~~~W~~~~~--~~Gr~YyyN~~T~~s~We~P 73 (75)
T 2jxw_A 14 EGYHYYYDLISGASQWEKPEGFQGDLK-KTAVKTVWVEGLS--EDGFTYYYNTETGESRWEKP 73 (75)
T ss_dssp TTEEEEEETTTTEEECSCCSSCSSCCS-SSSCCCSEEEEEE--TTTEEEEEETTTTEEESSCC
T ss_pred CCCEEEEECCCCCEeecCCCccccccc-ccCCCccEEEEEC--CCCCEEEEECcCCCEeccCc
Confidence 477888899999999998754311110 0011223333334 38999999999999998754
No 354
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=52.89 E-value=72 Score=24.14 Aligned_cols=22 Identities=14% Similarity=0.373 Sum_probs=16.4
Q ss_pred EccCcEEEEEeCCCCCeeeeecc
Q 040693 211 VQKSGFAWALDRDSGSLIWSMEA 233 (382)
Q Consensus 211 ~~~~g~l~ald~~tG~~~W~~~~ 233 (382)
-..+|.++.+|. +|+++|+...
T Consensus 67 l~~dGNLVl~d~-~~~~lW~S~~ 88 (119)
T 1b2p_A 67 LQPDGVLVVITN-ENVTVWQSPV 88 (119)
T ss_dssp ECTTSCEEEECT-TCCEEEECSC
T ss_pred EccCCEEEEEeC-CCcEEEcCCC
Confidence 345788888884 5899999764
No 355
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=52.88 E-value=1.4e+02 Score=27.39 Aligned_cols=109 Identities=15% Similarity=0.182 Sum_probs=57.4
Q ss_pred EEEEEcc-CcEEEEEeCCCCCeeeeeccCCCCCCC-Ccccceee-----eCCeEEEEecCccccccccCCCCCCCCCceE
Q 040693 207 IVVAVQK-SGFAWALDRDSGSLIWSMEAGPGGLGG-GAMWGAAT-----DERRIYTNIANSQHKNFNLKPSKNSTIAGGW 279 (382)
Q Consensus 207 ~v~~~~~-~g~l~ald~~tG~~~W~~~~~~~~~~g-~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v 279 (382)
.|++... .|.|+.++..+|+..--...+.....+ ....+.+. .++.||+.-.. ...++|
T Consensus 44 ~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~--------------~~~~~v 109 (347)
T 3das_A 44 DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS--------------ASDNRI 109 (347)
T ss_dssp CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC--------------SSSEEE
T ss_pred cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec--------------CCCCEE
Confidence 4666665 899999998877753211121110111 12233343 26888886332 123567
Q ss_pred EEEECCCC----------cEEeeecCCCCCCCCcceEEe-CCEEEEeeec------------CCCcEEEEeCC
Q 040693 280 VAMDASNG----------NVLWSTADPSNGTAPGPVTVA-NGVLFGGSTY------------RQGPIYAMDVK 329 (382)
Q Consensus 280 ~a~d~~tG----------~~~W~~~~~~~~~~~~~~~~~-~~~v~~~~~~------------~~g~l~~ld~~ 329 (382)
..+....+ +.+++.--.........+.+. ++.+|++... ..|.|+.|+++
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 77766542 334432111222345566665 5788887531 24778888875
No 356
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=46.98 E-value=87 Score=28.79 Aligned_cols=85 Identities=16% Similarity=0.240 Sum_probs=44.8
Q ss_pred CceEEEEECCCCcEEeeecCCC--CCCCCcc--eEEe-----CCEEEEeee-cCCCcEEEEeCCC----------CcEeE
Q 040693 276 AGGWVAMDASNGNVLWSTADPS--NGTAPGP--VTVA-----NGVLFGGST-YRQGPIYAMDVKT----------GKILW 335 (382)
Q Consensus 276 ~g~v~a~d~~tG~~~W~~~~~~--~~~~~~~--~~~~-----~~~v~~~~~-~~~g~l~~ld~~t----------G~ilw 335 (382)
.|+|+.++..+|+..=....+. .....++ +++. ++.+|+.-. ...++|..+..+. -++++
T Consensus 52 ~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~ 131 (347)
T 3das_A 52 EATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVF 131 (347)
T ss_dssp TCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEE
T ss_pred CCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEE
Confidence 5889999988887532222221 0011222 3342 578888521 1256788887654 23344
Q ss_pred E-EecCCceecc-eEE-eCCEEEEEeCc
Q 040693 336 S-YDTGATIYGG-ASV-SNGCIYMGNGY 360 (382)
Q Consensus 336 ~-~~~~~~~~~~-p~~-~~g~lyv~~~~ 360 (382)
+ .+....+... .++ .+|.||++.++
T Consensus 132 ~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 132 RGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred EcCCCCCCccCccccCCCCCCEEEEECC
Confidence 3 3322223333 333 37899999753
No 357
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=44.85 E-value=92 Score=23.00 Aligned_cols=86 Identities=13% Similarity=0.209 Sum_probs=47.9
Q ss_pred cEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECC
Q 040693 206 DIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDAS 285 (382)
Q Consensus 206 ~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~ 285 (382)
...+.-..||.++.++. ++.+|....... + ..-.+.+ ..+|.++.+|.
T Consensus 20 ~~~L~~q~dGnLvly~~--~~~vW~snt~~~---~--------~~~~l~l------------------~~dGNLvl~~~- 67 (109)
T 3dzw_A 20 RYVFIMQEDCNLVLYDV--DKPIWATNTGGL---D--------RRCHLSM------------------QSDGNLVVYSP- 67 (109)
T ss_dssp TEEEEECTTSCEEEEET--TEEEEECCCTTS---S--------SSCEEEE------------------CTTSCEEEECT-
T ss_pred CEEEEEcCCCcEEEEeC--CEEEEECCcccC---C--------CCEEEEE------------------eCCCCEEEECC-
Confidence 34444567888888886 689998664211 0 0112222 23467777774
Q ss_pred CCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEe
Q 040693 286 NGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYD 338 (382)
Q Consensus 286 tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~ 338 (382)
+++.+|....... . ........ ++|.|+..+. .+|+..
T Consensus 68 ~~~~~W~S~t~~~---~------~~~~~~L~--ddGNlvly~~----~~W~s~ 105 (109)
T 3dzw_A 68 RNNPIWASNTGGE---N------GNYVCVLQ--KDRNVVIYGT----ARWATG 105 (109)
T ss_dssp TSCEEEECCCCCS---S------SCEEEEEC--TTSCEEEEES----CCCCCC
T ss_pred CCCEEEECCCCCC---C------CCEEEEEe--CCCEEEEECC----CEEeCC
Confidence 5789998664321 1 12222222 3777777763 677643
No 358
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=35.23 E-value=1.3e+02 Score=22.15 Aligned_cols=22 Identities=23% Similarity=0.290 Sum_probs=16.4
Q ss_pred EccCcEEEEEeCCCCCeeeeecc
Q 040693 211 VQKSGFAWALDRDSGSLIWSMEA 233 (382)
Q Consensus 211 ~~~~g~l~ald~~tG~~~W~~~~ 233 (382)
-..+|.++.+|. +|+.+|+...
T Consensus 60 l~~dGNLvl~d~-~~~~iW~S~t 81 (110)
T 3r0e_B 60 LNHKGELIIKDD-DFKTIWSSRS 81 (110)
T ss_dssp ECTTSCEEEECT-TCCEEEECCC
T ss_pred EeCCCcEEEEeC-CCCEEEEcCC
Confidence 345788888886 5889998664
No 359
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=34.52 E-value=2.7e+02 Score=25.46 Aligned_cols=155 Identities=8% Similarity=-0.024 Sum_probs=73.5
Q ss_pred EEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccc-cccCCCCCCCCCceEEEEECCCCcEEeeec
Q 040693 216 FAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKN-FNLKPSKNSTIAGGWVAMDASNGNVLWSTA 294 (382)
Q Consensus 216 ~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~g~v~a~d~~tG~~~W~~~ 294 (382)
.++-+|..++...+-.+...... ...+-..+..++.+|++....-..+ +...........+.|+.+|+.+=+++- ..
T Consensus 142 elf~~d~~~~~~~~~~~~~g~~~-~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~-~~ 219 (355)
T 3sre_A 142 EVFKFQEEEKSLLHLKTIRHKLL-PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVA-EG 219 (355)
T ss_dssp EEEEEETTTTEEEEEEEECCTTC-SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEE-EE
T ss_pred EEEEEECCCCEEEEEeccccCCC-CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEee-cC
Confidence 47777877665555544332211 1222223335788888754321110 000000001235889999984212111 11
Q ss_pred CCCCCCCCcceEE--eCCEEEEeeecCCCcEEEEeCC-CCcEeEE--EecCCceecceEEe--CCEEEEEeC-ceeEeec
Q 040693 295 DPSNGTAPGPVTV--ANGVLFGGSTYRQGPIYAMDVK-TGKILWS--YDTGATIYGGASVS--NGCIYMGNG-YKVTVGF 366 (382)
Q Consensus 295 ~~~~~~~~~~~~~--~~~~v~~~~~~~~g~l~~ld~~-tG~ilw~--~~~~~~~~~~p~~~--~g~lyv~~~-~g~~~~~ 366 (382)
+.. ..-+.+ ++..+|++.. ..++|+++|.+ +|++.-+ ++.+ +.--...+. +|+||++.. .|. .+
T Consensus 220 l~~----pNGia~spDg~~lYvadt-~~~~I~~~~~~~~g~l~~~~~~~~~-g~PDGi~vD~e~G~lwva~~~~g~--~v 291 (355)
T 3sre_A 220 FDF----ANGINISPDGKYVYIAEL-LAHKIHVYEKHANWTLTPLRVLSFD-TLVDNISVDPVTGDLWVGCHPNGM--RI 291 (355)
T ss_dssp ESS----EEEEEECTTSSEEEEEEG-GGTEEEEEEECTTSCEEEEEEEECS-SEEEEEEECTTTCCEEEEEESCHH--HH
T ss_pred Ccc----cCcceECCCCCEEEEEeC-CCCeEEEEEECCCCcEecCEEEeCC-CCCceEEEeCCCCcEEEEecCCce--EE
Confidence 111 112223 3458888764 46889999875 4654322 1222 222334554 489999653 333 23
Q ss_pred CCccCC--CCCeEEEE
Q 040693 367 GNKNFT--SGTSLYAF 380 (382)
Q Consensus 367 ~~~~~~--~g~~l~~~ 380 (382)
..+++. .|+.++..
T Consensus 292 ~~~~P~~~~~s~v~rI 307 (355)
T 3sre_A 292 FFYDAENPPGSEVLRI 307 (355)
T ss_dssp HSCCTTSCCCEEEEEE
T ss_pred EEECCCCCCCCEEEEE
Confidence 334443 45565544
No 360
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=33.80 E-value=35 Score=24.79 Aligned_cols=62 Identities=10% Similarity=0.133 Sum_probs=40.2
Q ss_pred ccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEe
Q 040693 212 QKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLW 291 (382)
Q Consensus 212 ~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W 291 (382)
+.+|..|=+|..|++..|..+..... .....+.-.+-..+. +..|+++-++..|++..|
T Consensus 21 ~~~Gr~YYyN~~T~~s~We~P~~~~~---~~e~~~~~~~W~~~~------------------~~~Gr~Yy~N~~T~~s~W 79 (92)
T 2l5f_A 21 SPDGRTYYYNTETKQSTWEKPDDLKT---PAEQLLSKCPWKEYK------------------SDSGKTYYYNSQTKESRW 79 (92)
T ss_dssp CTTSCEEEEETTTTEEESSCSGGGTC---HHHHHHHSCSEEEEE------------------CTTCCEEEEETTTTEEES
T ss_pred cCCCCEEEEECCCCceecccCccccc---cccccccccceEEEE------------------CCCCCEEEEECCCCCeec
Confidence 44899999999999999998753210 000000001223333 345889999999999999
Q ss_pred eec
Q 040693 292 STA 294 (382)
Q Consensus 292 ~~~ 294 (382)
+.+
T Consensus 80 e~P 82 (92)
T 2l5f_A 80 AKP 82 (92)
T ss_dssp CCC
T ss_pred cCc
Confidence 875
No 361
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=33.46 E-value=5.6e+02 Score=28.76 Aligned_cols=31 Identities=23% Similarity=0.334 Sum_probs=27.0
Q ss_pred CCEEEEeeecCCCcEEEEeCCCCcEeEEEecCC
Q 040693 309 NGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGA 341 (382)
Q Consensus 309 ~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~ 341 (382)
.|.+|+.+ .-|.++.+|..||..+.+..++.
T Consensus 270 ~g~iy~it--k~G~~~~~d~~t~~~i~~~ris~ 300 (1630)
T 1xi4_A 270 HDVVFLIT--KYGYIHLYDLETGTCIYMNRISG 300 (1630)
T ss_pred cCEEEEEe--cCceEEEEecccchhhhhccccC
Confidence 47999998 48999999999999999887654
No 362
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=33.42 E-value=4.9e+02 Score=28.09 Aligned_cols=147 Identities=12% Similarity=0.040 Sum_probs=80.1
Q ss_pred CcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee--eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCc--E
Q 040693 214 SGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT--DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGN--V 289 (382)
Q Consensus 214 ~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~--~ 289 (382)
.+.+..+|+.+.+.+..+++.+.+..-+....... ....+.++++. ..|.......|+|+.|+...++ .
T Consensus 806 ~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~-------~~~~e~~~~~Gri~vf~v~~~kL~l 878 (1158)
T 3ei3_A 806 VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAM-------VYPEEAEPKQGRIVVFQYSDGKLQT 878 (1158)
T ss_dssp EEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEE-------CCTTCSSCCCEEEEEEEEETTEEEE
T ss_pred eEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeee-------cCCCCCCCCceEEEEEEEECCEEEE
Confidence 35688999999999998887754311111110000 13456665442 1222223356889988887554 4
Q ss_pred EeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeE-EEecCCcee-cceEEeCCEEEEEeCceeEeecC
Q 040693 290 LWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILW-SYDTGATIY-GGASVSNGCIYMGNGYKVTVGFG 367 (382)
Q Consensus 290 ~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw-~~~~~~~~~-~~p~~~~g~lyv~~~~g~~~~~~ 367 (382)
+.+.+.++. ...+..-+|+++++. ...|+.++....+.+- +...-..+. ......+++++|++.... +.++
T Consensus 879 v~~~~v~g~---v~al~~~~g~Lla~i---g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~S-v~~~ 951 (1158)
T 3ei3_A 879 VAEKEVKGA---VYSMVEFNGKLLASI---NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRS-VLLL 951 (1158)
T ss_dssp EEEEEESSC---EEEEEEETTEEEEEE---TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBC-EEEE
T ss_pred EEEEEcCCc---CEEEeeeCCEEEEEc---CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhhe-EEEE
Confidence 444555432 223333478888877 6888888876544332 211111111 122346899999987655 3344
Q ss_pred CccCCCC
Q 040693 368 NKNFTSG 374 (382)
Q Consensus 368 ~~~~~~g 374 (382)
.++...+
T Consensus 952 ~y~~~~~ 958 (1158)
T 3ei3_A 952 AYKPMEG 958 (1158)
T ss_dssp EEETTTT
T ss_pred EEEcCCC
Confidence 4444433
No 363
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=30.72 E-value=3.3e+02 Score=25.24 Aligned_cols=124 Identities=11% Similarity=0.029 Sum_probs=66.9
Q ss_pred ecEEEEEccCcEEEEEeCCCCC-----------eeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCC
Q 040693 205 HDIVVAVQKSGFAWALDRDSGS-----------LIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNS 273 (382)
Q Consensus 205 ~~~v~~~~~~g~l~ald~~tG~-----------~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 273 (382)
.+++++++.++ +..++.++.+ ..+..+.+ + ....+.++..+++.
T Consensus 49 ~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp-----~--V~~l~fd~~~L~v~----------------- 103 (388)
T 1xip_A 49 KSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIP-----D--VIFVCFHGDQVLVS----------------- 103 (388)
T ss_dssp TTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECT-----T--EEEEEEETTEEEEE-----------------
T ss_pred CCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCC-----C--eeEEEECCCEEEEE-----------------
Confidence 46777777776 4446544332 22333322 1 22233377777776
Q ss_pred CCCceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCceecceEEeCCE
Q 040693 274 TIAGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGATIYGGASVSNGC 353 (382)
Q Consensus 274 ~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~~~~~p~~~~g~ 353 (382)
..+.|..+|..+-........-.... ..+..-...+.+.+. +|.|+.+|.++++..- .. ....+.......
T Consensus 104 -~~~~l~v~dv~sl~~~~~~~~~~~~v--~~i~~~~p~~av~~~--dG~L~v~dl~~~~~~~---~~-~~Vs~v~WSpkG 174 (388)
T 1xip_A 104 -TRNALYSLDLEELSEFRTVTSFEKPV--FQLKNVNNTLVILNS--VNDLSALDLRTKSTKQ---LA-QNVTSFDVTNSQ 174 (388)
T ss_dssp -ESSEEEEEESSSTTCEEEEEECSSCE--EEEEECSSEEEEEET--TSEEEEEETTTCCEEE---EE-ESEEEEEECSSE
T ss_pred -cCCcEEEEEchhhhccCccceeecce--eeEEecCCCEEEEEC--CCCEEEEEccCCcccc---cc-CCceEEEEcCCc
Confidence 23779999988777665543222111 111122334555553 9999999999887642 21 122333443333
Q ss_pred EEEEeCcee
Q 040693 354 IYMGNGYKV 362 (382)
Q Consensus 354 lyv~~~~g~ 362 (382)
++++..+|.
T Consensus 175 ~~vg~~dg~ 183 (388)
T 1xip_A 175 LAVLLKDRS 183 (388)
T ss_dssp EEEEETTSC
T ss_pred eEEEEcCCc
Confidence 666666655
No 364
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=30.56 E-value=3e+02 Score=24.73 Aligned_cols=17 Identities=12% Similarity=0.112 Sum_probs=11.8
Q ss_pred ceEEeCCEEEEEeCcee
Q 040693 346 GASVSNGCIYMGNGYKV 362 (382)
Q Consensus 346 ~p~~~~g~lyv~~~~g~ 362 (382)
..++.+|.+|++...+.
T Consensus 272 G~~~~~G~l~v~~~~~~ 288 (352)
T 2ism_A 272 NLAFFRGDLYVAGLRGQ 288 (352)
T ss_dssp EEEEETTEEEEEETTTT
T ss_pred ceEEECCEEEEEECCCC
Confidence 34557889998876554
No 365
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=30.21 E-value=82 Score=22.50 Aligned_cols=64 Identities=13% Similarity=0.100 Sum_probs=39.4
Q ss_pred cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEEee
Q 040693 213 KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVLWS 292 (382)
Q Consensus 213 ~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~W~ 292 (382)
.+|.+|=+|..|++..|................++-.+..... +..|.++-+|..|++..|+
T Consensus 23 ~~Gr~Yy~n~~t~~t~W~~P~~~~~~~~~~~~~~LP~gWe~~~------------------~~~G~~Yy~nh~t~~ttw~ 84 (88)
T 1tk7_A 23 SDNRVYFVNHKNRTTQWEDPRTQGQEVSLINEGPLPPGWEIRY------------------TAAGERFFVDHNTRRTTFE 84 (88)
T ss_dssp TTTEEEEEETTTTEEEEESCCCTTTCCHHHHSCSSCSSCEEEE------------------ETTTEEEEEETTTTEEESS
T ss_pred CCCCEEEEECCCCCeEeecccccccccccccccccCCceEEEE------------------CCCCCEEEEECCCCcEeCC
Confidence 5799999999999999998753210000000111112333333 2347888899999999987
Q ss_pred ec
Q 040693 293 TA 294 (382)
Q Consensus 293 ~~ 294 (382)
.+
T Consensus 85 ~P 86 (88)
T 1tk7_A 85 DP 86 (88)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 366
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=29.41 E-value=1.7e+02 Score=27.13 Aligned_cols=82 Identities=13% Similarity=0.322 Sum_probs=53.6
Q ss_pred CCc--eEEEEECCCCcEEeeecCCCCCC-C-Ccc---e-EEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEecCCc----
Q 040693 275 IAG--GWVAMDASNGNVLWSTADPSNGT-A-PGP---V-TVANGVLFGGSTYRQGPIYAMDVKTGKILWSYDTGAT---- 342 (382)
Q Consensus 275 ~~g--~v~a~d~~tG~~~W~~~~~~~~~-~-~~~---~-~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~~~~~---- 342 (382)
... .+..+|+.+++++-++++..... . ..+ . +...+.+|+.+. ....|+.+|.+ |+++.++++...
T Consensus 48 ~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~-~~~~i~l~n~~-G~~~~k~~~~~~~~~~ 125 (369)
T 3s9j_A 48 QKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQN-NISRLSSINSQ-GEIIRNYNFQTPEGRF 125 (369)
T ss_dssp STTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEG-GGTEEEEECTT-CCEEEEEECCCTTSCC
T ss_pred CCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeC-CcceEEEECCC-ceEEEEEecCCCcccc
Confidence 456 89999999999998887655211 1 111 1 124577888763 24589999965 999999866431
Q ss_pred -------eecceE-EeCCEEEEEe
Q 040693 343 -------IYGGAS-VSNGCIYMGN 358 (382)
Q Consensus 343 -------~~~~p~-~~~g~lyv~~ 358 (382)
....|+ ..++.+|++.
T Consensus 126 ~~~~~~~~~~~p~~~~~~~l~~~~ 149 (369)
T 3s9j_A 126 TPLSFGSYYNAPAFIKDSCIFLRQ 149 (369)
T ss_dssp CCCCCBTTTTBCCEEETTEEEEEC
T ss_pred ccccccccccCcceecCceEEEec
Confidence 112444 3677788863
No 367
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=28.63 E-value=1.8e+02 Score=21.53 Aligned_cols=53 Identities=25% Similarity=0.388 Sum_probs=32.7
Q ss_pred EccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCcEE
Q 040693 211 VQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGNVL 290 (382)
Q Consensus 211 ~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~~~ 290 (382)
-..+|.++.++ .++++|......+ + ....+.+ ..+|.++.+|. +++.+
T Consensus 26 ~~~dgnlvly~--~~~~vW~sn~~~~---~--------~~~~l~l------------------~~~GnLvl~d~-~~~~v 73 (115)
T 2dpf_A 26 IQNKCNLVKYQ--NGRQIWASNTDRR---G--------SGCRLTL------------------LSDGNLVIYDH-NNNDV 73 (115)
T ss_dssp ECTTSCEEEEE--TTEEEEECSCTTS---C--------SSCEEEE------------------CTTSCEEEECT-TCCEE
T ss_pred EcCCCcEEEEe--CCEEEEeCCCCCC---C--------CceEEEE------------------CCCCcEEEECC-CceEE
Confidence 35677777777 4789998764321 0 1122333 34577887784 68999
Q ss_pred eeecC
Q 040693 291 WSTAD 295 (382)
Q Consensus 291 W~~~~ 295 (382)
|....
T Consensus 74 W~S~~ 78 (115)
T 2dpf_A 74 WGSAC 78 (115)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 98654
No 368
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=28.55 E-value=81 Score=35.20 Aligned_cols=59 Identities=24% Similarity=0.473 Sum_probs=43.0
Q ss_pred eecEEEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEE
Q 040693 204 KHDIVVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMD 283 (382)
Q Consensus 204 ~~~~v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d 283 (382)
..++|+.-+.-|.++.+|..||..+...+.. ...||++..+ ...+.+.+++
T Consensus 269 k~g~iy~itk~G~~~~~d~~t~~~i~~~ris---------------~~~iF~~~~~--------------~~~~g~~~vn 319 (1630)
T 1xi4_A 269 KHDVVFLITKYGYIHLYDLETGTCIYMNRIS---------------GETIFVTAPH--------------EATAGIIGVN 319 (1630)
T ss_pred ccCEEEEEecCceEEEEecccchhhhhcccc---------------CCceEEeccC--------------CCCCceEEEc
Confidence 4689999999999999999999999887753 2466666443 2345677777
Q ss_pred CCCCcEEee
Q 040693 284 ASNGNVLWS 292 (382)
Q Consensus 284 ~~tG~~~W~ 292 (382)
+.|+++-.
T Consensus 320 -r~G~vl~v 327 (1630)
T 1xi4_A 320 -RKGQVLSV 327 (1630)
T ss_pred -CCceEEEE
Confidence 55665543
No 369
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=27.39 E-value=3.7e+02 Score=24.83 Aligned_cols=59 Identities=12% Similarity=0.067 Sum_probs=36.9
Q ss_pred EEEEccCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceee-eCCeEEEEecCccccccccCCCCCCCCCceEEEEECCC
Q 040693 208 VVAVQKSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAAT-DERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASN 286 (382)
Q Consensus 208 v~~~~~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~t 286 (382)
+.+.+.+|.|+.+|.++++..- ... ......+ -++ ++++ ..+|.+..+++.+
T Consensus 139 ~av~~~dG~L~v~dl~~~~~~~-~~~--------~Vs~v~WSpkG-~~vg-----------------~~dg~i~~~~~~~ 191 (388)
T 1xip_A 139 LVILNSVNDLSALDLRTKSTKQ-LAQ--------NVTSFDVTNSQ-LAVL-----------------LKDRSFQSFAWRN 191 (388)
T ss_dssp EEEEETTSEEEEEETTTCCEEE-EEE--------SEEEEEECSSE-EEEE-----------------ETTSCEEEEEEET
T ss_pred EEEEECCCCEEEEEccCCcccc-ccC--------CceEEEEcCCc-eEEE-----------------EcCCcEEEEcCCC
Confidence 6677889999999999887642 111 1122222 233 4444 3457889999888
Q ss_pred CcE--Eeee
Q 040693 287 GNV--LWST 293 (382)
Q Consensus 287 G~~--~W~~ 293 (382)
++. +-++
T Consensus 192 ~~~~~k~~I 200 (388)
T 1xip_A 192 GEMEKQFEF 200 (388)
T ss_dssp TEEEEEEEE
T ss_pred cccccccee
Confidence 885 5555
No 370
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=27.31 E-value=22 Score=25.87 Aligned_cols=60 Identities=13% Similarity=0.133 Sum_probs=39.6
Q ss_pred CceEEEEECCCCcEEeeecCCCCCCCCcceEEeCCEEEEeeecCCCcEEEEeCCCCcEeEEEe
Q 040693 276 AGGWVAMDASNGNVLWSTADPSNGTAPGPVTVANGVLFGGSTYRQGPIYAMDVKTGKILWSYD 338 (382)
Q Consensus 276 ~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~ld~~tG~ilw~~~ 338 (382)
.|.++-++..|++..|+.+...... ...+....+-.-..+ .+|++|-+|..|++-.|..+
T Consensus 23 ~Gr~YYyN~~T~~s~We~P~~~~~~-~e~~~~~~~W~~~~~--~~Gr~Yy~N~~T~~s~We~P 82 (92)
T 2l5f_A 23 DGRTYYYNTETKQSTWEKPDDLKTP-AEQLLSKCPWKEYKS--DSGKTYYYNSQTKESRWAKP 82 (92)
T ss_dssp TSCEEEEETTTTEEESSCSGGGTCH-HHHHHHSCSEEEEEC--TTCCEEEEETTTTEEESCCC
T ss_pred CCCEEEEECCCCceecccCcccccc-ccccccccceEEEEC--CCCCEEEEECCCCCeeccCc
Confidence 5788889999999999987543110 000011223322233 38999999999999999764
No 371
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=25.35 E-value=6.6e+02 Score=27.04 Aligned_cols=173 Identities=10% Similarity=0.042 Sum_probs=91.1
Q ss_pred CcceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEc--------
Q 040693 141 HSNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQ-------- 212 (382)
Q Consensus 141 ~~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~-------- 212 (382)
+.+.|..+|+.|.+.+.++++.+...-. + +....-.......+++|+
T Consensus 805 ~~s~i~lidp~t~~~i~~~~l~~nE~~~-----------------------s--v~~v~~~~~~~~~lvVGTa~~~~~e~ 859 (1158)
T 3ei3_A 805 EVHNLLIIDQHTFEVLHAHQFLQNEYAL-----------------------S--LVSCKLGKDPNTYFIVGTAMVYPEEA 859 (1158)
T ss_dssp EEEEEEEEETTTCCEEEEEECCTTEEEE-----------------------E--EEEECCTTCCCCEEEEEEEECCTTCS
T ss_pred eeEEEEEEeCCCCeEEEEEeCCCCcceE-----------------------E--EEEEEEccCCCEEEEEEeeecCCCCC
Confidence 3578999999999999999887653210 0 000010111134455544
Q ss_pred --cCcEEEEEeCCCCCeeeeeccCCCCCCCCcccceeeeCCeEEEEecCccccccccCCCCCCCCCceEEEEECCCCc-E
Q 040693 213 --KSGFAWALDRDSGSLIWSMEAGPGGLGGGAMWGAATDERRIYTNIANSQHKNFNLKPSKNSTIAGGWVAMDASNGN-V 289 (382)
Q Consensus 213 --~~g~l~ald~~tG~~~W~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~a~d~~tG~-~ 289 (382)
..|.++.++...+++.--.+.. ..| ...+....++++.++. .+.++.+|....+ +
T Consensus 860 ~~~~Gri~vf~v~~~kL~lv~~~~---v~g-~v~al~~~~g~Lla~i------------------g~~l~vy~l~~~~~L 917 (1158)
T 3ei3_A 860 EPKQGRIVVFQYSDGKLQTVAEKE---VKG-AVYSMVEFNGKLLASI------------------NSTVRLYEWTTEKEL 917 (1158)
T ss_dssp SCCCEEEEEEEEETTEEEEEEEEE---ESS-CEEEEEEETTEEEEEE------------------TTEEEEEEECTTSCE
T ss_pred CCCceEEEEEEEECCEEEEEEEEE---cCC-cCEEEeeeCCEEEEEc------------------CCEEEEEECCCCceE
Confidence 3577888877654433222221 112 2333333567777763 3568888887554 3
Q ss_pred EeeecCCCCCCCCcceEEeCCEEEEeeecCCCc--EEEEeCCCCcEeEEEecCCc--eecceEEeCCEEEEEeCceeE
Q 040693 290 LWSTADPSNGTAPGPVTVANGVLFGGSTYRQGP--IYAMDVKTGKILWSYDTGAT--IYGGASVSNGCIYMGNGYKVT 363 (382)
Q Consensus 290 ~W~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~--l~~ld~~tG~ilw~~~~~~~--~~~~p~~~~g~lyv~~~~g~~ 363 (382)
+.+...-. ......+...++++++++. ... ++.++...++..--..-... ..+.-.+.++.+.++..+|++
T Consensus 918 ~~~~~~~~-~i~~~~l~~~~~~I~vgD~--~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl 992 (1158)
T 3ei3_A 918 RTECNHYN-NIMALYLKTKGDFILVGDL--MRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNL 992 (1158)
T ss_dssp EEEEEECC-CSCEEEEEEETTEEEEEES--SBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEE
T ss_pred EEEeeccc-cEEEEEEeccCCEEEEEEh--hheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcE
Confidence 32222111 1111123345789999885 333 44556665555443322222 233344567777778888774
No 372
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=24.14 E-value=4.3e+02 Score=24.44 Aligned_cols=67 Identities=13% Similarity=0.130 Sum_probs=43.2
Q ss_pred cceEEEEECCCC--cEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeC------ceeecEEEEEc-
Q 040693 142 SNSLLALDLDTG--KIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRN------KVKHDIVVAVQ- 212 (382)
Q Consensus 142 ~g~v~ald~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~------g~~~~~v~~~~- 212 (382)
...|+++|++|+ +++-++.++..... ..-.+.++..+ .-.+..+|..+
T Consensus 122 ~pkLv~~DL~t~~~~li~~y~~p~~~~~-----------------------~~S~l~di~VD~~~~~~~c~~~~aYItD~ 178 (381)
T 3q6k_A 122 RPAIVAYDLKQPNYPEVVRYYFPTRLVE-----------------------KPTYFGGFAVDVANPKGDCSETFVYITNF 178 (381)
T ss_dssp CCEEEEEESSSTTCCEEEEEECCGGGCC-----------------------CGGGEEEEEEEESCTTTTSCSEEEEEEET
T ss_pred CceEEEEECCCCCceeEEEEECCHHhcc-----------------------cCCccceEEEecccCCCCCCccEEEEEcC
Confidence 468999999999 99999998765211 11123333222 11145666665
Q ss_pred cCcEEEEEeCCCCCeeeeec
Q 040693 213 KSGFAWALDRDSGSLIWSME 232 (382)
Q Consensus 213 ~~g~l~ald~~tG~~~W~~~ 232 (382)
....|..+|.++|+ .|+..
T Consensus 179 ~~~gLIVydl~~~~-swRv~ 197 (381)
T 3q6k_A 179 LRGALFIYDHKKQD-SWNVT 197 (381)
T ss_dssp TTTEEEEEETTTTE-EEEEE
T ss_pred CCCcEEEEECCCCc-EEEEc
Confidence 35679999999874 55655
No 373
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=20.66 E-value=2.6e+02 Score=20.56 Aligned_cols=17 Identities=18% Similarity=0.196 Sum_probs=12.6
Q ss_pred cceEEEEeCccCceeeeeec
Q 040693 54 QGSLAKLDAKTGRILWQTFM 73 (382)
Q Consensus 54 ~g~l~ald~~tG~~lW~~~~ 73 (382)
+|.|+.++.. + +|....
T Consensus 29 dGnLvl~~~~-~--vW~snt 45 (111)
T 3mez_A 29 DCNLVLYNEA-G--GFQSNT 45 (111)
T ss_dssp TSCEEEECSS-C--CEECCC
T ss_pred CCeEEEECCC-C--EEECCc
Confidence 7888888753 3 999665
No 374
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=20.12 E-value=63 Score=22.18 Aligned_cols=61 Identities=16% Similarity=0.114 Sum_probs=39.6
Q ss_pred cceEEEEECCCCcEEEEEecCCCcccccccccCCCCCCCCCCCCCCCCCCCceEEEeeeCceeecEEEEEccCcEEEEEe
Q 040693 142 SNSLLALDLDTGKIVWYKQLGGYDVWFGACNWYLNPNCPPGPSPDADFGEAPMMLSMYRNKVKHDIVVAVQKSGFAWALD 221 (382)
Q Consensus 142 ~g~v~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~v~~~~~~g~l~ald 221 (382)
.|.+|-+|..|++..|.........- ..+.+ ..+... ..+.+|.+|-+|
T Consensus 11 ~Gr~YY~n~~T~~s~W~~P~~~~~~~-----------------------~~~~l-------p~gW~~-~~~~~Gr~Yy~n 59 (75)
T 1o6w_A 11 SGRIYYYNTLTKKSTWEKPKELISQE-----------------------ELLLR-------ENGWKA-AKTADGKVYYYN 59 (75)
T ss_dssp TCCEEEEETTTTEEESSCCHHHHHHH-----------------------HHHHH-------HHTCEE-EECTTCCEEEEE
T ss_pred CCCeEEEECCCCCEEeecchhhcccc-----------------------cccCC-------CCeEEE-EECCCCCEEEEE
Confidence 48899999999999998754321000 00000 002223 345678999999
Q ss_pred CCCCCeeeeecc
Q 040693 222 RDSGSLIWSMEA 233 (382)
Q Consensus 222 ~~tG~~~W~~~~ 233 (382)
..|++..|..+.
T Consensus 60 ~~t~~t~W~~P~ 71 (75)
T 1o6w_A 60 PTTRETSWTIPA 71 (75)
T ss_dssp TTTTEEESSCCC
T ss_pred CCCCCEECCCCC
Confidence 999999998764
Done!