BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040695
MQDASQCSETGLHSLENKRKPLVLKELKKLWEKIDPNLPWKKGEYNETNTLLLDDSPYKA
LCNPAHTAIFPYPYDYRNAEDSSLGHGGNLRVYLEGLADAENVQEYVRQNPFGQEAITER
NPSWGFYSKIFSTKSQPPPYDDNSSSKATSANSFEPHVGGNTSSTRPQP

High Scoring Gene Products

Symbol, full name Information P value
AT2G36540 protein from Arabidopsis thaliana 1.2e-19
AT3G29760 protein from Arabidopsis thaliana 5.0e-12

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040695
        (169 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2044862 - symbol:AT2G36540 "AT2G36540" species...   213  1.2e-19   2
TAIR|locus:2091823 - symbol:AT3G29760 "AT3G29760" species...   170  5.0e-12   1


>TAIR|locus:2044862 [details] [associations]
            symbol:AT2G36540 "AT2G36540" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR004274 Pfam:PF03031 PROSITE:PS50969
            SMART:SM00577 EMBL:CP002685 GenomeReviews:CT485783_GR
            Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
            EMBL:AC006919 GO:GO:0016787 IPI:IPI00518305 PIR:G84781
            RefSeq:NP_181193.1 UniGene:At.37542 ProteinModelPortal:Q9SJQ4
            EnsemblPlants:AT2G36540.1 GeneID:818227 KEGG:ath:AT2G36540
            TAIR:At2g36540 HOGENOM:HOG000029061 InParanoid:Q9SJQ4 OMA:WSSACEL
            PhylomeDB:Q9SJQ4 ProtClustDB:CLSN2683935 Genevestigator:Q9SJQ4
            Uniprot:Q9SJQ4
        Length = 249

 Score = 213 (80.0 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
 Identities = 40/89 (44%), Positives = 57/89 (64%)

Query:    42 KGEYNETNTLLLDDSPYKALCNPAHTAIFPYPYDYRNAEDSSLGHGGNLRVYLEGLADAE 101
             KG ++ +NT+ +DD PYKAL NP +T +FP  YD  N +D+ L   G L  YLEGLA + 
Sbjct:   157 KG-FSASNTIFIDDEPYKALRNPDNTGLFPMSYDASNIKDNLLDPEGELCSYLEGLAKSS 215

Query:   102 NVQEYVRQNPFGQEAITERNPSWGFYSKI 130
             +VQ Y++ + FG+  I   +P W FYS +
Sbjct:   216 DVQAYIKVHSFGRPMIDSSHPDWSFYSNV 244

 Score = 35 (17.4 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
 Identities = 5/12 (41%), Positives = 10/12 (83%)

Query:     6 QCSETGLHSLEN 17
             +C+++G  +LEN
Sbjct:   128 ECTDSGYKTLEN 139


>TAIR|locus:2091823 [details] [associations]
            symbol:AT3G29760 "AT3G29760" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR004274 Pfam:PF03031 PROSITE:PS50969
            SMART:SM00577 EMBL:CP002686 Gene3D:3.40.50.1000 InterPro:IPR023214
            SUPFAM:SSF56784 GO:GO:0016787 IPI:IPI00544063 RefSeq:NP_189619.2
            UniGene:At.36864 ProteinModelPortal:F4J488 SMR:F4J488 PRIDE:F4J488
            EnsemblPlants:AT3G29760.1 GeneID:822663 KEGG:ath:AT3G29760
            OMA:VKNNDSC Uniprot:F4J488
        Length = 465

 Score = 170 (64.9 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 34/67 (50%), Positives = 40/67 (59%)

Query:     3 DASQCSETGLHSLENXXXXXXXXXXXXXXXXIDPNLPWKKGEYNETNTLLLDDSPYKALC 62
             D S C+ T + SLEN                 DP LPWK G+YNETNT+LLDDSPYKAL 
Sbjct:   388 DMSYCATTSVGSLENRYKYVVFKDLNRLWEKHDPRLPWKMGDYNETNTVLLDDSPYKALL 447

Query:    63 NPAHTAI 69
             NP ++ I
Sbjct:   448 NPQYSLI 454


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.309   0.129   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      169       153   0.00081  105 3  11 23  0.46    32
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  586 (62 KB)
  Total size of DFA:  156 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.64u 0.10s 16.74t   Elapsed:  00:00:01
  Total cpu time:  16.64u 0.10s 16.74t   Elapsed:  00:00:01
  Start:  Sat May 11 07:36:23 2013   End:  Sat May 11 07:36:24 2013

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