BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040695
(169 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O94336|YHM3_SCHPO Uncharacterized FCP1 homology domain-containing protein C1271.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC1271.03c PE=4 SV=1
Length = 244
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 19 RKPLVLKELKKLWEKIDPNLPWKKGEYNETNTLLLDDSPYKALCNPA-HTAIFPYPYDYR 77
RK K L +WEKI + K +++ NT+++DDS K +P H A+ +
Sbjct: 118 RKVQTYKNLDTVWEKIHHDSTGKPVSWSQYNTIIVDDSKTKCAAHPYNHIAVSDFVAKSH 177
Query: 78 NAEDSSLGHGGNLRVYLEGLADAENVQEYVRQNPF 112
+ + +R YL+ L NV Y+ + PF
Sbjct: 178 SNIPKDIELACVIR-YLKHLKSVPNVSYYIYKFPF 211
>sp|P42685|FRK_HUMAN Tyrosine-protein kinase FRK OS=Homo sapiens GN=FRK PE=1 SV=1
Length = 505
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 28 KKLWEKIDPNLPWKKGEYNETNTLLLDDSPYKALCNP-----AHTAIFPYPYDYRNAEDS 82
++LWE ++P LP E +++ + ++P ALC+P H + + Y R AED
Sbjct: 6 QRLWEYLEPYLPCLSTEADKSTVI---ENP-GALCSPQSQRHGHYFVALFDYQARTAEDL 61
Query: 83 SLGHGGNLRV 92
S G L+V
Sbjct: 62 SFRAGDKLQV 71
>sp|Q7SXR3|MAEA_DANRE Macrophage erythroblast attacher OS=Danio rerio GN=maea PE=2 SV=2
Length = 396
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 56 SPYKALCNPAHTAIFPYPYDYRNAEDSSLGHGGNLRVYLE-GLADAENVQEYVRQNPFGQ 114
SPYK L +PA + + Y N LG+ + L+ GL+ + Q Y +
Sbjct: 252 SPYKDLLDPARWKMLIQQFRYDNYRLHQLGNNSVFTITLQAGLSAIKTPQCY-------K 304
Query: 115 EAITERNPSWGFYSKIFSTKSQPPPYDDNSSSKATSANSFE 155
E T +NP SK + +QP P ++S+ S E
Sbjct: 305 EDGTSKNPDCPVCSKSLNKLAQPLPMAHCANSRLVCKISGE 345
>sp|Q7VBM9|SYW_PROMA Tryptophan--tRNA ligase OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=trpS PE=3 SV=1
Length = 339
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 20 KPLVLKELKKLWEKIDPNLPWKKGEYNETNTLLLDDSP 57
KPL++KE K+ ID N+ K + NE + + L DSP
Sbjct: 181 KPLIMKEGGKIMSLIDGNMKMSKSDPNENSRIALLDSP 218
>sp|Q6GR10|MAEA_XENLA Macrophage erythroblast attacher OS=Xenopus laevis GN=maea PE=2
SV=2
Length = 396
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 56 SPYKALCNPAHTAIFPYPYDYRNAEDSSLGHGGNLRVYLE-GLADAENVQEYVRQNPFGQ 114
SPYK L +PA + + Y N LG+ + L+ GL+ + Q Y +
Sbjct: 252 SPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTITLQAGLSAIKTPQCY-------K 304
Query: 115 EAITERNPSWGFYSKIFSTKSQPPPYDDNSSSKATSANS 153
E T +NP SK + +QP P ++S+ S
Sbjct: 305 EDGTSKNPDCPVCSKSLNKLAQPLPLAHCANSRLVCKIS 343
>sp|Q7MH68|CAPP_VIBVY Phosphoenolpyruvate carboxylase OS=Vibrio vulnificus (strain YJ016)
GN=ppc PE=3 SV=2
Length = 877
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 74 YDYRNAEDSSLGHGGNLRVYLE----GLADAENVQEYVRQNPFGQEAITERN 121
YD R A+ S L G LR L+ + + EN + ++ +P+GQE+I RN
Sbjct: 780 YDERLADKSLLPLGDRLRDQLQSDIKAVLNVENNENLMQSDPWGQESIRLRN 831
>sp|Q8DCN2|CAPP_VIBVU Phosphoenolpyruvate carboxylase OS=Vibrio vulnificus (strain CMCP6)
GN=ppc PE=3 SV=1
Length = 877
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 74 YDYRNAEDSSLGHGGNLRVYLE----GLADAENVQEYVRQNPFGQEAITERN 121
YD R A+ S L G LR L+ + + EN + ++ +P+GQE+I RN
Sbjct: 780 YDERLADKSLLPLGDRLRDQLQSDIKAVLNVENNENLMQSDPWGQESIRLRN 831
>sp|P15330|DORS_DROME Embryonic polarity protein dorsal OS=Drosophila melanogaster GN=dl
PE=1 SV=2
Length = 999
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 120 RNPSWGFYSKIFSTKSQPPPY---DDNSSSKATSANSFEPHVG 159
R GF+SK+FS + P +NSS + ANS EP +G
Sbjct: 754 RQKKPGFFSKLFSRRKSKPDLAQGQENSSILDSKANSREPSIG 796
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.129 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,058,887
Number of Sequences: 539616
Number of extensions: 2989465
Number of successful extensions: 5261
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 5257
Number of HSP's gapped (non-prelim): 17
length of query: 169
length of database: 191,569,459
effective HSP length: 109
effective length of query: 60
effective length of database: 132,751,315
effective search space: 7965078900
effective search space used: 7965078900
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)