BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040698
(309 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 158/286 (55%), Gaps = 5/286 (1%)
Query: 2 ELVKATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQ 61
EL A+ N+ +++LG GGFG VYKG L D TLVAVK+ K FQ ++ +IS
Sbjct: 32 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISM 91
Query: 62 INHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ-SSQVLKTWKTCLRIAAETASA 120
H+N++++ G C+ LLVY ++ NG++ +R + SQ W RIA +A
Sbjct: 92 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARG 151
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
L YLH P IIH DVK+ANILLD+ + A V DF + L+ D T+G +
Sbjct: 152 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR-GTIGHI 210
Query: 181 DPEYLFW---TEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLR 237
PEYL +EK+DV+ +GV+L+EL+TG+ LA+++ ++ + ++ L
Sbjct: 211 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 270
Query: 238 QILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDS 283
+++ + + EE+E + ++A C ++S ERP M +V L+
Sbjct: 271 ALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 160/287 (55%), Gaps = 7/287 (2%)
Query: 2 ELVKATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEV-FQHKMRIIS 60
EL A+ N+ +++LG GGFG VYKG L D LVAVK+ K ++ E+ FQ ++ +IS
Sbjct: 24 ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKE-ERTQGGELQFQTEVEMIS 82
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ-SSQVLKTWKTCLRIAAETAS 119
H+N++++ G C+ LLVY ++ NG++ +R + SQ W RIA +A
Sbjct: 83 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSAR 142
Query: 120 ALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGW 179
L YLH P IIH DVK+ANILLD+ + A V DF + L+ D +G
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR-GXIGH 201
Query: 180 LDPEYLFW---TEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSL 236
+ PEYL +EK+DV+ +GV+L+EL+TG+ LA+++ ++ + ++ L
Sbjct: 202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261
Query: 237 RQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDS 283
+++ + + EE+E + ++A C ++S ERP M +V L+
Sbjct: 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 158/294 (53%), Gaps = 12/294 (4%)
Query: 2 ELVKATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQ 61
+L +AT N+D + L+G G FG VYKGVL D VA+K+ + + E F+ ++ +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEIETLSF 91
Query: 62 INHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSS--QVLKTWKTCLRIAAETAS 119
H ++V ++G C E +L+Y+++ NG L +H+ Y S + +W+ L I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL-YGSDLPTMSMSWEQRLEICIGAAR 150
Query: 120 ALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGW 179
L YLH+ IIH DVKS NILLD+N+ K+ DF S + DQT T+G+
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 180 LDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSL 236
+DPEY TEKSDVYSFGVVL E+L + + V EM + + N L
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR--SAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 237 RQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHEN 290
QI++ +AD+ E + A KCL S +RP+M V +L+ RL E+
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 157/294 (53%), Gaps = 12/294 (4%)
Query: 2 ELVKATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQ 61
+L +AT N+D + L+G G FG VYKGVL D VA+K+ + + E F+ ++ +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEIETLSF 91
Query: 62 INHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSS--QVLKTWKTCLRIAAETAS 119
H ++V ++G C E +L+Y+++ NG L +H+ Y S + +W+ L I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL-YGSDLPTMSMSWEQRLEICIGAAR 150
Query: 120 ALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGW 179
L YLH+ IIH DVKS NILLD+N+ K+ DF S + QT T+G+
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 180 LDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSL 236
+DPEY TEKSDVYSFGVVL E+L + + V EM + + N L
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR--SAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 237 RQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHEN 290
QI++ +AD+ E + A KCL S +RP+M V +L+ RL E+
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 157/301 (52%), Gaps = 33/301 (10%)
Query: 2 ELVKATKNYDKRHL------LGEGGFGFVYKGVLPDNTLVAVKK-PKMVDKIL--INEVF 52
EL T N+D+R + +GEGGFG VYKG + +NT VAVKK MVD + + F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 77
Query: 53 QHKMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLR 112
+++++++ H+N+V++LG + LVY ++PNG+L + +W +
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 113 IAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
IA A+ +++LH IH D+KSANILLD+ +TAK++DF + QT ++
Sbjct: 138 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSR 194
Query: 173 EIETVGWLDPEYLFW--TEKSDVYSFGVVLVELLTG-------KHPRSYVALASNEMTRM 223
+ T ++ PE L T KSD+YSFGVVL+E++TG + P+ + +
Sbjct: 195 IVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEE 254
Query: 224 VPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDS 283
Y + + +N + + +E + +AS+CL +RP +++V + L
Sbjct: 255 KTIEDY------IDKKMN-----DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
Query: 284 L 284
+
Sbjct: 304 M 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 156/301 (51%), Gaps = 33/301 (10%)
Query: 2 ELVKATKNYDKRHL------LGEGGFGFVYKGVLPDNTLVAVKK-PKMVDKIL--INEVF 52
EL T N+D+R + +GEGGFG VYKG + +NT VAVKK MVD + + F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 77
Query: 53 QHKMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLR 112
+++++++ H+N+V++LG + LVY ++PNG+L + +W +
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 113 IAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
IA A+ +++LH IH D+KSANILLD+ +TAK++DF + QT +
Sbjct: 138 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXR 194
Query: 173 EIETVGWLDPEYLFW--TEKSDVYSFGVVLVELLTG-------KHPRSYVALASNEMTRM 223
+ T ++ PE L T KSD+YSFGVVL+E++TG + P+ + +
Sbjct: 195 IVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEE 254
Query: 224 VPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDS 283
Y + + +N + + +E + +AS+CL +RP +++V + L
Sbjct: 255 KTIEDY------IDKKMN-----DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
Query: 284 L 284
+
Sbjct: 304 M 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 155/301 (51%), Gaps = 33/301 (10%)
Query: 2 ELVKATKNYDKRHL------LGEGGFGFVYKGVLPDNTLVAVKK-PKMVDKIL--INEVF 52
EL T N+D+R + +GEGGFG VYKG + +NT VAVKK MVD + + F
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 71
Query: 53 QHKMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLR 112
+++++++ H+N+V++LG + LVY ++PNG+L + +W +
Sbjct: 72 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 131
Query: 113 IAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
IA A+ +++LH IH D+KSANILLD+ +TAK++DF + Q +
Sbjct: 132 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXR 188
Query: 173 EIETVGWLDPEYLFW--TEKSDVYSFGVVLVELLTG-------KHPRSYVALASNEMTRM 223
+ T ++ PE L T KSD+YSFGVVL+E++TG + P+ + +
Sbjct: 189 IVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEE 248
Query: 224 VPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDS 283
Y + + +N + + +E + +AS+CL +RP +++V + L
Sbjct: 249 KTIEDY------IDKKMN-----DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 297
Query: 284 L 284
+
Sbjct: 298 M 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 148/298 (49%), Gaps = 33/298 (11%)
Query: 2 ELVKATKNYDKRHL------LGEGGFGFVYKGVLPDNTLVAVKK-PKMVDKIL--INEVF 52
EL T N+D+R + GEGGFG VYKG + +NT VAVKK MVD + + F
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 68
Query: 53 QHKMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLR 112
++++ ++ H+N+V++LG + LVY + PNG+L + +W +
Sbjct: 69 DQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCK 128
Query: 113 IAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
IA A+ +++LH IH D+KSANILLD+ +TAK++DF + Q ++
Sbjct: 129 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSR 185
Query: 173 EIETVGWLDPEYLFW--TEKSDVYSFGVVLVELLTG-------KHPRSYVALASNEMTRM 223
+ T + PE L T KSD+YSFGVVL+E++TG + P+ + +
Sbjct: 186 IVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEE 245
Query: 224 VPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQL 281
Y + ++ + +E +AS+CL +RP +++V + L
Sbjct: 246 KTIEDYIDKK-----------XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 122/220 (55%), Gaps = 35/220 (15%)
Query: 10 YDKRHLLGEGGFGFVYKGVL-PDNTLVAVK---------KPKMVDKILINEVFQHKMRII 59
Y+K+ +G+GGFG V+KG L D ++VA+K + +M++K + FQ ++ I+
Sbjct: 23 YEKQ--IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF---QEFQREVFIM 77
Query: 60 SQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETAS 119
S +NH N+VK+ G L P +V EFVP G L+ + ++ + W LR+ + A
Sbjct: 78 SNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLDIAL 133
Query: 120 ALDYLHSLGSPPIIHGDVKSANILL---DDN--YTAKVADFASSVLISSHDQTATTTKEI 174
++Y+ + +PPI+H D++S NI L D+N AKVADF +S + + +
Sbjct: 134 GIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-----QQSVHSVSGLL 187
Query: 175 ETVGWLDPEYLF-----WTEKSDVYSFGVVLVELLTGKHP 209
W+ PE + +TEK+D YSF ++L +LTG+ P
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 122/220 (55%), Gaps = 35/220 (15%)
Query: 10 YDKRHLLGEGGFGFVYKGVL-PDNTLVAVK---------KPKMVDKILINEVFQHKMRII 59
Y+K+ +G+GGFG V+KG L D ++VA+K + +M++K + FQ ++ I+
Sbjct: 23 YEKQ--IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF---QEFQREVFIM 77
Query: 60 SQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETAS 119
S +NH N+VK+ G L P +V EFVP G L+ + ++ + W LR+ + A
Sbjct: 78 SNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLDIAL 133
Query: 120 ALDYLHSLGSPPIIHGDVKSANILL---DDN--YTAKVADFASSVLISSHDQTATTTKEI 174
++Y+ + +PPI+H D++S NI L D+N AKVADF+ S + + +
Sbjct: 134 GIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-----QQSVHSVSGLL 187
Query: 175 ETVGWLDPEYLF-----WTEKSDVYSFGVVLVELLTGKHP 209
W+ PE + +TEK+D YSF ++L +LTG+ P
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 35/220 (15%)
Query: 10 YDKRHLLGEGGFGFVYKGVL-PDNTLVAVK---------KPKMVDKILINEVFQHKMRII 59
Y+K+ +G+GGFG V+KG L D ++VA+K + +M++K + FQ ++ I+
Sbjct: 23 YEKQ--IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF---QEFQREVFIM 77
Query: 60 SQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETAS 119
S +NH N+VK+ G L P +V EFVP G L+ + ++ + W LR+ + A
Sbjct: 78 SNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLDIAL 133
Query: 120 ALDYLHSLGSPPIIHGDVKSANILL---DDN--YTAKVADFASSVLISSHDQTATTTKEI 174
++Y+ + +PPI+H D++S NI L D+N AKVADF S + + +
Sbjct: 134 GIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVHSVSGLL 187
Query: 175 ETVGWLDPEYLF-----WTEKSDVYSFGVVLVELLTGKHP 209
W+ PE + +TEK+D YSF ++L +LTG+ P
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 150/318 (47%), Gaps = 44/318 (13%)
Query: 6 ATKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHK 55
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKE 59
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMAT 118
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ +SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 119 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF- 174
Query: 176 TVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-I 231
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGI 216
Query: 232 ENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
+ + + ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 217 DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------F 270
Query: 292 WAQKNSEETEQLLGESST 309
S+E E+ LG+ T
Sbjct: 271 QESSISDEVEKELGKRGT 288
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 151/318 (47%), Gaps = 44/318 (13%)
Query: 6 ATKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHK 55
++ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKE 64
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMAT 123
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ +SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 124 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF- 179
Query: 176 TVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-I 231
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGI 221
Query: 232 ENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
+ + + ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 222 DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------F 275
Query: 292 WAQKNSEETEQLLGESST 309
S+E E+ LG+ T
Sbjct: 276 QESSISDEVEKELGKRGT 293
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 150/318 (47%), Gaps = 44/318 (13%)
Query: 6 ATKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHK 55
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKE 59
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMAT 118
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ +SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 119 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF- 174
Query: 176 TVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-I 231
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGI 216
Query: 232 ENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
+ + + ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 217 DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------F 270
Query: 292 WAQKNSEETEQLLGESST 309
S+E E+ LG+ T
Sbjct: 271 QESSISDEVEKELGKRGT 288
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 144/298 (48%), Gaps = 34/298 (11%)
Query: 13 RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+H LG G FG VY+GV +L K D + + E F + ++ +I H N+V++LG
Sbjct: 16 KHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLG 74
Query: 73 VCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPI 132
VC ++ EF+ G L ++R + Q + L +A + +SA++YL
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKKN---F 130
Query: 133 IHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE--- 189
IH D+ + N L+ +N+ KVADF S L++ TA + + W PE L + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAYNKFSI 189
Query: 190 KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IENNSLRQILNFQVADEN 248
KSDV++FGV+L E +A+ M+ PYP I+ + + ++L E
Sbjct: 190 KSDVWAFGVLLWE------------IATYGMS------PYPGIDPSQVYELLEKDYRMER 231
Query: 249 EMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFWAQKNSEETEQLLGE 306
E V +L C + + ++RP+ ++ + +++ F S+E E+ LG+
Sbjct: 232 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------FQESSISDEVEKELGK 283
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 150/316 (47%), Gaps = 44/316 (13%)
Query: 5 KATKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQH 54
+ + NYDK +H LG G +G VY+GV +L K D + + E F
Sbjct: 13 QGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLK 71
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
+ ++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A
Sbjct: 72 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMA 130
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
+ +SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 131 TQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 187
Query: 175 ETVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP- 230
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP
Sbjct: 188 -PIKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPG 228
Query: 231 IENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHEN 290
I+ + + ++L E E V +L C + + ++RP+ ++ + +++
Sbjct: 229 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------ 282
Query: 291 FWAQKNSEETEQLLGE 306
F S+E E+ LG+
Sbjct: 283 FQESSISDEVEKELGK 298
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 149/314 (47%), Gaps = 44/314 (14%)
Query: 7 TKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM 56
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 3 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA 61
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A +
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQ 120
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
+SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 121 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-P 176
Query: 177 VGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IE 232
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I+
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGID 218
Query: 233 NNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFW 292
+ + ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 219 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------FQ 272
Query: 293 AQKNSEETEQLLGE 306
S+E E+ LG+
Sbjct: 273 ESSISDEVEKELGK 286
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 149/314 (47%), Gaps = 44/314 (14%)
Query: 7 TKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM 56
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 4 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA 62
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQ 121
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
+SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 122 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF-P 177
Query: 177 VGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IE 232
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I+
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGID 219
Query: 233 NNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFW 292
+ + ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 220 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------FQ 273
Query: 293 AQKNSEETEQLLGE 306
S+E E+ LG+
Sbjct: 274 ESSISDEVEKELGK 287
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 148/314 (47%), Gaps = 44/314 (14%)
Query: 6 ATKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHK 55
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKE 59
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMAT 118
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ +SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 119 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF- 174
Query: 176 TVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-I 231
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGI 216
Query: 232 ENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
+ + + ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 217 DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------F 270
Query: 292 WAQKNSEETEQLLG 305
S+E E+ LG
Sbjct: 271 QESSISDEVEKELG 284
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 149/314 (47%), Gaps = 44/314 (14%)
Query: 7 TKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM 56
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 3 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA 61
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A +
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQ 120
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
+SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 121 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF-P 176
Query: 177 VGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IE 232
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I+
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGID 218
Query: 233 NNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFW 292
+ + ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 219 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------FQ 272
Query: 293 AQKNSEETEQLLGE 306
S+E E+ LG+
Sbjct: 273 ESSISDEVEKELGK 286
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 148/314 (47%), Gaps = 44/314 (14%)
Query: 6 ATKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHK 55
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKE 59
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMAT 118
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ +SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 119 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF- 174
Query: 176 TVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-I 231
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGI 216
Query: 232 ENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
+ + + ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 217 DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------F 270
Query: 292 WAQKNSEETEQLLG 305
S+E E+ LG
Sbjct: 271 QESSISDEVEKELG 284
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 44/317 (13%)
Query: 6 ATKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHK 55
++ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKE 64
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMAT 123
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ +SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 124 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF- 179
Query: 176 TVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-I 231
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGI 221
Query: 232 ENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
+ + + ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 222 DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------F 275
Query: 292 WAQKNSEETEQLLGESS 308
S+E E+ LG+
Sbjct: 276 QESSISDEVEKELGKQG 292
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 149/314 (47%), Gaps = 44/314 (14%)
Query: 7 TKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM 56
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 4 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA 62
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQ 121
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
+SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 122 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-P 177
Query: 177 VGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IE 232
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I+
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGID 219
Query: 233 NNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFW 292
+ + ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 220 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------FQ 273
Query: 293 AQKNSEETEQLLGE 306
S+E E+ LG+
Sbjct: 274 ESSISDEVEKELGK 287
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 148/312 (47%), Gaps = 44/312 (14%)
Query: 9 NYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRI 58
NYDK +H LG G +G VY+GV +L K D + + E F + +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 64
Query: 59 ISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETA 118
+ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQIS 123
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVG 178
SA++YL IH D+ + N L+ +N+ KVADF S L++ TA + +
Sbjct: 124 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIK 179
Query: 179 WLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IENN 234
W PE L + + KSDV++FGV+L E +A+ M+ PYP I+ +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGIDLS 221
Query: 235 SLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFWAQ 294
+ ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 222 QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------FQES 275
Query: 295 KNSEETEQLLGE 306
S+E E+ LG+
Sbjct: 276 SISDEVEKELGK 287
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 44/317 (13%)
Query: 7 TKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM 56
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 209 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA 267
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A +
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQ 326
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
+SA++YL IH ++ + N L+ +N+ KVADF S L++ TA +
Sbjct: 327 ISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-P 382
Query: 177 VGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IE 232
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I+
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGID 424
Query: 233 NNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFW 292
+ + ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 425 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------FQ 478
Query: 293 AQKNSEETEQLLGESST 309
S+E E+ LG+ T
Sbjct: 479 ESSISDEVEKELGKRGT 495
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 38/293 (12%)
Query: 6 ATKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHK 55
++ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKE 64
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMAT 123
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ +SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 124 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF- 179
Query: 176 TVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-I 231
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGI 221
Query: 232 ENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+ + + ++L E E V +L C + + ++RP+ ++ + +++
Sbjct: 222 DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 38/293 (12%)
Query: 6 ATKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHK 55
++ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKE 64
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMAT 123
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ +SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 124 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF- 179
Query: 176 TVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-I 231
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGI 221
Query: 232 ENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+ + + ++L E E V +L C + + ++RP+ ++ + +++
Sbjct: 222 DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 38/293 (12%)
Query: 6 ATKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHK 55
++ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKE 64
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-VVLLYMAT 123
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ +SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 124 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF- 179
Query: 176 TVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-I 231
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGI 221
Query: 232 ENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+ + + ++L E E V +L C + + ++RP+ ++ + +++
Sbjct: 222 DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 140/292 (47%), Gaps = 38/292 (13%)
Query: 7 TKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM 56
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 6 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA 64
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A +
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQ 123
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
+SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 124 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-P 179
Query: 177 VGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IE 232
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I+
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGID 221
Query: 233 NNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+ + ++L E E V +L C + + ++RP+ ++ + +++
Sbjct: 222 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 140/292 (47%), Gaps = 38/292 (13%)
Query: 7 TKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM 56
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA 60
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQ 119
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
+SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 120 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-P 175
Query: 177 VGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IE 232
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I+
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGID 217
Query: 233 NNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+ + ++L E E V +L C + + ++RP+ ++ + +++
Sbjct: 218 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 144/298 (48%), Gaps = 34/298 (11%)
Query: 13 RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+H LG G +G VY+GV +L K D + + E F + ++ +I H N+V++LG
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLG 74
Query: 73 VCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPI 132
VC ++ EF+ G L ++R + Q + L +A + +SA++YL
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKKN---F 130
Query: 133 IHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE--- 189
IH D+ + N L+ +N+ KVADF S L++ TA + + W PE L + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF-PIKWTAPESLAYNKFSI 189
Query: 190 KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IENNSLRQILNFQVADEN 248
KSDV++FGV+L E +A+ M+ PYP I+ + + ++L E
Sbjct: 190 KSDVWAFGVLLWE------------IATYGMS------PYPGIDPSQVYELLEKDYRMER 231
Query: 249 EMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFWAQKNSEETEQLLGE 306
E V +L C + + ++RP+ ++ + +++ F S+E E+ LG+
Sbjct: 232 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------FQESSISDEVEKELGK 283
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 140/292 (47%), Gaps = 38/292 (13%)
Query: 7 TKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM 56
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA 60
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQ 119
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
+SA++YL IH D+ + N L+ +N+ KVADF S L++ TA +
Sbjct: 120 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-P 175
Query: 177 VGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IE 232
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I+
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGID 217
Query: 233 NNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+ + ++L E E V +L C + + ++RP+ ++ + +++
Sbjct: 218 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 13 RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+H LG G +G VY+GV +L K D + + E F + ++ +I H N+V++LG
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLG 74
Query: 73 VCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPI 132
VC ++ EF+ G L ++R + Q + L +A + +SA++YL
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKKN---F 130
Query: 133 IHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE--- 189
IH D+ + N L+ +N+ KVADF S L++ TA + + W PE L + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAYNKFSI 189
Query: 190 KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IENNSLRQILNFQVADEN 248
KSDV++FGV+L E +A+ M+ PYP I+ + + ++L E
Sbjct: 190 KSDVWAFGVLLWE------------IATYGMS------PYPGIDPSQVYELLEKDYRMER 231
Query: 249 EMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
E V +L C + + ++RP+ ++ + +++
Sbjct: 232 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 32/280 (11%)
Query: 16 LGEGGFGFVYKGVL-PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+G G FG V+ G L DNTLVAVK + + F + RI+ Q +H N+V+++GVC
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 75 LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIH 134
+ + +V E V G +R + +++ KT L++ + A+ ++YL S IH
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARL--RVKTLLQMVGDAAAGMEYLE---SKCCIH 236
Query: 135 GDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKS 191
D+ + N L+ + K++DF S + A+ V W PE Y ++ +S
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 192 DVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IENNSLRQILNFQVADENEM 250
DV+SFG++L E + L ++ PYP + N R+ + +
Sbjct: 297 DVWSFGILLWETFS---------LGAS---------PYPNLSNQQTREFV--EKGGRLPC 336
Query: 251 EEI--EIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLH 288
E+ + V +L +C +RP+ + ++L S+R+ H
Sbjct: 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 149/314 (47%), Gaps = 44/314 (14%)
Query: 7 TKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM 56
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 206 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA 264
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A +
Sbjct: 265 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQ 323
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
+SA++YL IH ++ + N L+ +N+ KVADF S L++ TA +
Sbjct: 324 ISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-P 379
Query: 177 VGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IE 232
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I+
Sbjct: 380 IKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGID 421
Query: 233 NNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFW 292
+ + ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 422 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------FQ 475
Query: 293 AQKNSEETEQLLGE 306
S+E E+ LG+
Sbjct: 476 ESSISDEVEKELGK 489
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 149/314 (47%), Gaps = 44/314 (14%)
Query: 7 TKNYDK----------RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM 56
+ NYDK +H LG G +G VY+GV +L K D + + E F +
Sbjct: 248 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA 306
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
++ +I H N+V++LGVC ++ EF+ G L ++R + Q + L +A +
Sbjct: 307 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQ 365
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
+SA++YL IH ++ + N L+ +N+ KVADF S L++ TA +
Sbjct: 366 ISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-P 421
Query: 177 VGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IE 232
+ W PE L + + KSDV++FGV+L E +A+ M+ PYP I+
Sbjct: 422 IKWTAPESLAYNKFSIKSDVWAFGVLLWE------------IATYGMS------PYPGID 463
Query: 233 NNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFW 292
+ + ++L E E V +L C + + ++RP+ ++ + +++ F
Sbjct: 464 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM------FQ 517
Query: 293 AQKNSEETEQLLGE 306
S+E E+ LG+
Sbjct: 518 ESSISDEVEKELGK 531
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 32/280 (11%)
Query: 16 LGEGGFGFVYKGVL-PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+G G FG V+ G L DNTLVAVK + + F + RI+ Q +H N+V+++GVC
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 75 LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIH 134
+ + +V E V G +R + +++ KT L++ + A+ ++YL S IH
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARL--RVKTLLQMVGDAAAGMEYLE---SKCCIH 236
Query: 135 GDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKS 191
D+ + N L+ + K++DF S + A+ V W PE Y ++ +S
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 192 DVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP-IENNSLRQILNFQVADENEM 250
DV+SFG++L E + L ++ PYP + N R+ + +
Sbjct: 297 DVWSFGILLWETFS---------LGAS---------PYPNLSNQQTREFV--EKGGRLPC 336
Query: 251 EEI--EIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLH 288
E+ + V +L +C +RP+ + ++L S+R+ H
Sbjct: 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ ++ + L+ + +AA+ AS + Y+ + +H
Sbjct: 74 EEPI-XIVTEYMSKGSLLDFLKGETGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 128
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSD 187
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 188 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 226
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 227 PPECPESLHDLMCQCWRKEPEERPTF 252
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ ++ + L+ + +AA+ AS + Y+ + +H
Sbjct: 77 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 131
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 190
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 191 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 229
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 230 PPECPESLHDLMCQCWRKEPEERPTF 255
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 128/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ +I H+ +V++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ + + L+ + +AA+ AS + Y+ + +H
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 198 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 236
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ ++ + L+ + +AA+ AS + Y+ + +H
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 304
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 363
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 364 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 402
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ ++ + L+ + +AA+ AS + Y+ + +H
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 304
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 363
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 364 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 402
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 128/265 (48%), Gaps = 36/265 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ + + L+ + +AA+ AS + Y+ + +H
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 198 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 236
Query: 251 --EEIEIVAKLASKCLRTSGTERPT 273
E E + L +C R ERPT
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ ++ + L+ + +AA+ AS + Y+ + +H
Sbjct: 333 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 387
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 446
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 447 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 485
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 486 PPECPESLHDLMCQCWRKEPEERPTF 511
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ ++ + L+ + +AA+ AS + Y+ + +H
Sbjct: 250 EEPI-YIVGEYMSKGSLLDFLKGETGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 304
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 363
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 364 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 402
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 15/205 (7%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILIN-EVFQHKMRIISQINHKNVVKILGVC 74
+G G FG VYKG + VAVK K+VD + F++++ ++ + H N++ +G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 75 LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIH 134
+ + + V ++ +L++H+ Q ++ + IA +TA +DYLH+ IIH
Sbjct: 102 TKDNLAI-VTQWCEGSSLYKHLHVQETKFQMF--QLIDIARQTAQGMDYLHAKN---IIH 155
Query: 135 GDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE----- 189
D+KS NI L + T K+ DF + + S + + +V W+ PE + +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 190 -KSDVYSFGVVLVELLTGKHPRSYV 213
+SDVYS+G+VL EL+TG+ P S++
Sbjct: 216 FQSDVYSYGIVLYELMTGELPYSHI 240
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ + + L+ + +AA+ AS + Y+ + +H
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 198 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 236
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ + + L+ + +AA+ AS + Y+ + +H
Sbjct: 75 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 129
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 188
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 189 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 227
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 228 PPECPESLHDLMCQCWRKDPEERPTF 253
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ + + L+ + +AA+ AS + Y+ + +H
Sbjct: 84 EEPI-YIVCEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 198 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 236
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ + + L+ + +AA+ AS + Y+ + +H
Sbjct: 73 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 127
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 186
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 187 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 225
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 226 PPECPESLHDLMCQCWRKDPEERPTF 251
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 36/265 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G L ++ + + L+ + +AA+ AS + Y+ + +H
Sbjct: 84 EEPI-YIVMEYMSKGCLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 198 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 236
Query: 251 --EEIEIVAKLASKCLRTSGTERPT 273
E E + L +C R ERPT
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ + + L+ + +AA+ AS + Y+ + +H
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 198 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 236
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ ++ + L+ + ++A+ AS + Y+ + +H
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRL-PQLVDMSAQIASGMAYVERMN---YVHR 135
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF-PIKWTAPEAALYGRFTIKSD 194
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 195 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 233
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 234 PPECPESLHDLMCQCWRKEPEERPTF 259
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G L ++ + + L+ + +AA+ AS + Y+ + +H
Sbjct: 84 EEPI-YIVTEYMSKGCLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 198 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 236
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ ++ + L+ + ++A+ AS + Y+ + +H
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRL-PQLVDMSAQIASGMAYVERMN---YVHR 135
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 194
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 195 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 233
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 234 PPECPESLHDLMCQCWRKEPEERPTF 259
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 34/279 (12%)
Query: 13 RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+H LG G +G VY GV +L K D + + E F + ++ +I H N+V++LG
Sbjct: 37 KHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLG 95
Query: 73 VCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPI 132
VC +V E++P G L ++R + ++ T L +A + +SA++YL
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLR-ECNREEVTAVVLLYMATQISSAMEYLEKKN---F 151
Query: 133 IHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE--- 189
IH D+ + N L+ +N+ KVADF S L++ TA + + W PE L +
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNTFSI 210
Query: 190 KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENE 249
KSDV++FGV+L E +A+ M+ PYP L Q+ + +
Sbjct: 211 KSDVWAFGVLLWE------------IATYGMS------PYP--GIDLSQVYDL-LEKGYR 249
Query: 250 MEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
ME+ E V +L C + S +RP+ + + +++
Sbjct: 250 MEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + + E F + +++ ++ H+ +V++ V
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGN--MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ + + L+ + +AA+ AS + Y+ + +H
Sbjct: 251 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 305
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ +N KVADF LI ++ TA + + W PE Y +T KSD
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 364
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 365 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 403
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 404 PPECPESLHDLMCQCWRKDPEERPTF 429
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 36/266 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG+G FG V+ G T VA+K K + E F + +++ ++ H+ +V++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E + +V E++ G+L ++ + + L+ + +AA+ AS + Y+ + +H
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRL-PQLVDMAAQIASGMAYVERMN---YVHR 138
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+ +ANIL+ +N KVADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM-- 250
V+SFG++L EL T PYP N R++L+ QV M
Sbjct: 198 VWSFGILLTELTTKGR------------------VPYPGMVN--REVLD-QVERGYRMPC 236
Query: 251 --EEIEIVAKLASKCLRTSGTERPTM 274
E E + L +C R ERPT
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 107/202 (52%), Gaps = 16/202 (7%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVD--KILINEVFQHKMRIISQINHKNVVKILGV 73
+G G FG V++ + VAVK D +NE F ++ I+ ++ H N+V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPNIVLFMGA 102
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPII 133
+ +V E++ G+L++ + ++ + L +A + A ++YLH+ +PPI+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 134 HGDVKSANILLDDNYTAKVADFASSVLISS---HDQTATTTKEIETVGWLDPEYLF---W 187
H D+KS N+L+D YT KV DF S L +S + A T E W+ PE L
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPE-----WMAPEVLRDEPS 216
Query: 188 TEKSDVYSFGVVLVELLTGKHP 209
EKSDVYSFGV+L EL T + P
Sbjct: 217 NEKSDVYSFGVILWELATLQQP 238
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 40/277 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK--KPKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
LG G FG V+ G NT VA+K KP + E F + +I+ ++ H +V++ V
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP----ESFLEEAQIMKKLKHDKLVQLYAV 72
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPII 133
E + +V E++ G+L ++ + LK + +AA+ A+ + Y+ + I
Sbjct: 73 VSEEPI-YIVTEYMNKGSLLDFLKDGEGRALKL-PNLVDMAAQVAAGMAYIERMN---YI 127
Query: 134 HGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEK 190
H D++SANIL+ + K+ADF + LI ++ TA + + W PE Y +T K
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIK 186
Query: 191 SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM 250
SDV+SFG++L EL+T PYP NN R++L QV M
Sbjct: 187 SDVWSFGILLTELVTKGR------------------VPYPGMNN--REVLE-QVERGYRM 225
Query: 251 ---EEIEI-VAKLASKCLRTSGTERPTMRQVSEQLDS 283
++ I + +L C + ERPT + L+
Sbjct: 226 PCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLED 262
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 26/216 (12%)
Query: 16 LGEGGFGFVY----KGVLP--DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LGEG FG V+ +LP D LVAVK K + + FQ + +++ + H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES-ARQDFQREAELLTMLQHQHIVR 84
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQS--SQVLKTWKTC----------LRIAAET 117
GVC E + L+V+E++ +G L + +R +++L + L +A++
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
A+ + YL L +H D+ + N L+ K+ DF S I S D + + +
Sbjct: 145 AAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 178 GWLDPE---YLFWTEKSDVYSFGVVLVELLT-GKHP 209
W+ PE Y +T +SDV+SFGVVL E+ T GK P
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 26/216 (12%)
Query: 16 LGEGGFGFVY----KGVLP--DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LGEG FG V+ +LP D LVAVK K + + FQ + +++ + H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES-ARQDFQREAELLTMLQHQHIVR 78
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQS--SQVLKTWKTC----------LRIAAET 117
GVC E + L+V+E++ +G L + +R +++L + L +A++
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
A+ + YL L +H D+ + N L+ K+ DF S I S D + + +
Sbjct: 139 AAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 178 GWLDPE---YLFWTEKSDVYSFGVVLVELLT-GKHP 209
W+ PE Y +T +SDV+SFGVVL E+ T GK P
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 26/216 (12%)
Query: 16 LGEGGFGFVY----KGVLP--DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LGEG FG V+ +LP D LVAVK K + + FQ + +++ + H+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES-ARQDFQREAELLTMLQHQHIVR 107
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQS--SQVLKTWKTC----------LRIAAET 117
GVC E + L+V+E++ +G L + +R +++L + L +A++
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
A+ + YL L +H D+ + N L+ K+ DF S I S D + + +
Sbjct: 168 AAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 178 GWLDPE---YLFWTEKSDVYSFGVVLVELLT-GKHP 209
W+ PE Y +T +SDV+SFGVVL E+ T GK P
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 108/202 (53%), Gaps = 16/202 (7%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVD--KILINEVFQHKMRIISQINHKNVVKILGV 73
+G G FG V++ + VAVK D +NE F ++ I+ ++ H N+V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPNIVLFMGA 102
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPII 133
+ +V E++ G+L++ + ++ + L +A + A ++YLH+ +PPI+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 134 HGDVKSANILLDDNYTAKVADFASSVLISS---HDQTATTTKEIETVGWLDPEYLF---W 187
H ++KS N+L+D YT KV DF S L +S ++A T E W+ PE L
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE-----WMAPEVLRDEPS 216
Query: 188 TEKSDVYSFGVVLVELLTGKHP 209
EKSDVYSFGV+L EL T + P
Sbjct: 217 NEKSDVYSFGVILWELATLQQP 238
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 140/284 (49%), Gaps = 40/284 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK-------KPKMVDKILINEVFQHKMRIISQINHKNVV 68
+G G FG VYKG + VAVK P+ + + F++++ ++ + H N++
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL------QAFKNEVGVLRKTRHVNIL 71
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+G + ++ + V ++ +L+ H+ +S+ K + IA +TA +DYLH+
Sbjct: 72 LFMGYSTKPQLAI-VTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHA-- 126
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF-- 186
IIH D+KS NI L ++ T K+ DF + + S + + ++ W+ PE +
Sbjct: 127 -KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 187 ----WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
++ +SDVY+FG+VL EL+TG+ P S + +++ MV + + +R
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSLSPDLSKVRSNCP- 243
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
+ + +L ++CL+ ERP+ ++ +++ L R
Sbjct: 244 -----------KRMKRLMAECLKKKRDERPSFPRILAEIEELAR 276
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 36/240 (15%)
Query: 16 LGEGGFGFVYK----GVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+GEG FG V++ G+LP T+VAVK K + FQ + ++++ ++ N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWK------------------TC- 110
+LGVC K L++E++ G L + +R S + + +C
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 111 --LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTA 168
L IA + A+ + YL +H D+ + N L+ +N K+ADF S I S D
Sbjct: 175 EQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 169 TTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
+ + W+ PE +F +T +SDV+++GVVL E+ + G P Y +A E+ V
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP--YYGMAHEEVIYYV 289
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 85 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 139
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ D + K+ADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSD 198
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 199 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 239
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N EE+ + +L C + +RPT D LR + E+F
Sbjct: 240 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDF 273
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 87 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 141
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ D + K+ADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSD 200
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 201 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 241
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N EE+ + +L C + +RPT D LR + E+F
Sbjct: 242 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDF 275
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 139/284 (48%), Gaps = 40/284 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK-------KPKMVDKILINEVFQHKMRIISQINHKNVV 68
+G G FG VYKG + VAVK P+ + + F++++ ++ + H N++
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL------QAFKNEVGVLRKTRHVNIL 83
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+G + ++ + V ++ +L+ H+ +S+ K + IA +TA +DYLH+
Sbjct: 84 LFMGYSTKPQLAI-VTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHA-- 138
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF-- 186
IIH D+KS NI L ++ T K+ DF + S + + ++ W+ PE +
Sbjct: 139 -KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 187 ----WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
++ +SDVY+FG+VL EL+TG+ P S + +++ MV + + +R
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSLSPDLSKVRSNCP- 255
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
+ + +L ++CL+ ERP+ ++ +++ L R
Sbjct: 256 -----------KRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 88 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 142
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ D + K+ADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSD 201
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 202 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 242
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N EE+ + +L C + +RPT D LR + E+F
Sbjct: 243 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDF 276
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 79 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ D + K+ADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSD 192
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 193 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 233
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N EE+ + +L C + +RPT D LR + E+F
Sbjct: 234 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDF 267
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 89 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 143
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ D + K+ADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSD 202
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 203 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 243
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N EE+ + +L C + +RPT D LR + E+F
Sbjct: 244 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDF 277
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 81 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 135
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ D + K+ADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSD 194
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 195 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 235
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N EE+ + +L C + +RPT D LR + E+F
Sbjct: 236 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDF 269
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 79 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ D + K+ADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSD 192
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 193 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 233
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N EE+ + +L C + +RPT D LR + E+F
Sbjct: 234 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDF 267
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 80 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 134
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ D + K+ADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSD 193
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 194 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 234
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N EE+ + +L C + +RPT D LR + E+F
Sbjct: 235 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDF 268
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 85 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 139
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ D + K+ADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSD 198
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 199 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 239
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N EE+ + +L C + +RPT D LR + E+F
Sbjct: 240 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDF 273
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 12/198 (6%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
+G G FG V+ G + VA+K + + + E F + ++ +++H +V++ GVCL
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E LV+EF+ +G L ++R Q L +T L + + + YL +IH
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLE---EASVIHR 127
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+ + N L+ +N KV+DF + + DQ ++T V W PE + ++ KSD
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 193 VYSFGVVLVELLT-GKHP 209
V+SFGV++ E+ + GK P
Sbjct: 187 VWSFGVLMWEVFSEGKIP 204
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 84 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 138
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ D + K+ADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSD 197
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 198 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 238
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N EE+ + +L C + +RPT D LR + E+F
Sbjct: 239 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDF 272
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 45/285 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 74 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 128
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ D + K+ADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSD 187
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 188 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 228
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFW 292
N EE+ + +L C + +RPT D LR + E+F+
Sbjct: 229 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDFF 263
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 136/278 (48%), Gaps = 28/278 (10%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILIN-EVFQHKMRIISQINHKNVVKILGVC 74
+G G FG VYKG + VAVK + + F++++ ++ + H N++ +G
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 75 LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIH 134
++ + V ++ +L+ H+ +S+ K + IA +TA +DYLH+ IIH
Sbjct: 90 TAPQLAI-VTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHA---KSIIH 143
Query: 135 GDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF------WT 188
D+KS NI L ++ T K+ DF + S + + ++ W+ PE + ++
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 189 EKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADEN 248
+SDVY+FG+VL EL+TG+ P S + +++ MV + + +R
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSLSPDLSKVRSNCP------- 255
Query: 249 EMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
+ + +L ++CL+ ERP+ ++ +++ L R
Sbjct: 256 -----KRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 12/198 (6%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
+G G FG V+ G + VA+K + + + E F + ++ +++H +V++ GVCL
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E LV+EF+ +G L ++R Q L +T L + + + YL +IH
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLE---EACVIHR 125
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+ + N L+ +N KV+DF + + DQ ++T V W PE + ++ KSD
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 193 VYSFGVVLVELLT-GKHP 209
V+SFGV++ E+ + GK P
Sbjct: 185 VWSFGVLMWEVFSEGKIP 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 12/198 (6%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
+G G FG V+ G + VA+K + + + E F + ++ +++H +V++ GVCL
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E LV+EF+ +G L ++R Q L +T L + + + YL +IH
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLE---EACVIHR 127
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+ + N L+ +N KV+DF + + DQ ++T V W PE + ++ KSD
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 193 VYSFGVVLVELLT-GKHP 209
V+SFGV++ E+ + GK P
Sbjct: 187 VWSFGVLMWEVFSEGKIP 204
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 12/198 (6%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
+G G FG V+ G + VA+K + + + E F + ++ +++H +V++ GVCL
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E LV+EF+ +G L ++R Q L +T L + + + YL +IH
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLE---EACVIHR 130
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+ + N L+ +N KV+DF + + DQ ++T V W PE + ++ KSD
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 193 VYSFGVVLVELLT-GKHP 209
V+SFGV++ E+ + GK P
Sbjct: 190 VWSFGVLMWEVFSEGKIP 207
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 79 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ D + K+ADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSD 192
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 193 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 233
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N EE+ + +L C + +RPT D LR + E+F
Sbjct: 234 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDF 267
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 133/298 (44%), Gaps = 52/298 (17%)
Query: 15 LLGEGGFGFVYKGVLPDNTL---VAVKKPKMVDKILINEVFQHKMRIISQI-NHKNVVKI 70
++GEG FG V K + + L A+K+ K + F ++ ++ ++ +H N++ +
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKT---------------WKTCLRIAA 115
LG C L E+ P+G L +R S+VL+T + L AA
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLR--KSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ A +DYL IH D+ + NIL+ +NY AK+ADF L + T
Sbjct: 140 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFG---LSRGQEVYVKKTMGRL 193
Query: 176 TVGWLDPE---YLFWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPI 231
V W+ E Y +T SDV+S+GV+L E+++ G P Y + E+ +P
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--YCGMTCAELYEKLP------ 245
Query: 232 ENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHE 289
+ L + LN DE V L +C R ERP+ Q+ L SL R+ E
Sbjct: 246 QGYRLEKPLN--CDDE--------VYDLMRQCWREKPYERPSFAQI---LVSLNRMLE 290
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 41/289 (14%)
Query: 12 KRHLLGEGGFGFVYKGVLPDNT-----LVAVK--KPKMVDKILINEVFQHKMRIISQINH 64
++ ++G G FG VYKG+L ++ VA+K K +K ++ F + I+ Q +H
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD--FLGEAGIMGQFSH 105
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQ--VLKTWKTCLRIAAETASALD 122
N++++ GV + K +++ E++ NG L + +R + + VL+ IAA +
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA----GMK 161
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLD 181
YL ++ +H D+ + NIL++ N KV+DF S VL + T TT+ + W
Sbjct: 162 YLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 182 PE---YLFWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLR 237
PE Y +T SDV+SFG+V+ E++T G+ P Y L+++E+ + + N+ R
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERP--YWELSNHEVMKAI--------NDGFR 268
Query: 238 QILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
M+ + +L +C + RP + LD L R
Sbjct: 269 L--------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 133/298 (44%), Gaps = 52/298 (17%)
Query: 15 LLGEGGFGFVYKGVLPDNTL---VAVKKPKMVDKILINEVFQHKMRIISQI-NHKNVVKI 70
++GEG FG V K + + L A+K+ K + F ++ ++ ++ +H N++ +
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKT---------------WKTCLRIAA 115
LG C L E+ P+G L +R S+VL+T + L AA
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLR--KSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ A +DYL IH D+ + NIL+ +NY AK+ADF L + T
Sbjct: 150 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFG---LSRGQEVYVKKTMGRL 203
Query: 176 TVGWLDPE---YLFWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPI 231
V W+ E Y +T SDV+S+GV+L E+++ G P Y + E+ +P
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--YCGMTCAELYEKLP------ 255
Query: 232 ENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHE 289
+ L + LN DE V L +C R ERP+ Q+ L SL R+ E
Sbjct: 256 QGYRLEKPLN--CDDE--------VYDLMRQCWREKPYERPSFAQI---LVSLNRMLE 300
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 26/229 (11%)
Query: 16 LGEGGFGFVYKG----VLP--DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LGEG FG V+ + P D LVAVK K + F + +++ + H+++VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD-FHREAELLTNLQHEHIVK 79
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVL----------KTWKTCLRIAAETAS 119
GVC+E ++V+E++ +G L + +R + T L IA + A+
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 120 ALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGW 179
+ Y L S +H D+ + N L+ +N K+ DF S + S D + + W
Sbjct: 140 GMVY---LASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 180 LDPE---YLFWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
+ PE Y +T +SDV+S GVVL E+ T GK P + L++NE+ +
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP--WYQLSNNEVIECI 243
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG V G L VA+K K+ F + I+ Q +H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++K ++V E++ NG+L +R +Q T + + AS + YL +G
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMG-- 167
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YLF 186
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 168 -FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+T SDV+S+G+VL E+++ G+ P V A +E R+ P P L +L
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL--ML 284
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGT 269
+ D N + E + + K +R G+
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKLIRNPGS 313
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + +L S
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFL---AS 152
Query: 130 PPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
+H D+ + N +LD+ +T KVADF A +L D T V W+ E L
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 186 -FWTEKSDVYSFGVVLVELLTGKHP 209
+T KSDV+SFGV+L EL+T P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 12/198 (6%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
+G G FG V+ G + VA+K K + + + F + ++ +++H +V++ GVCL
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK--EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E LV+EF+ +G L ++R Q L +T L + + + YL +IH
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLE---EACVIHR 147
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+ + N L+ +N KV+DF + + DQ ++T V W PE + ++ KSD
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 193 VYSFGVVLVELLT-GKHP 209
V+SFGV++ E+ + GK P
Sbjct: 207 VWSFGVLMWEVFSEGKIP 224
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG V G L VA+K K+ F + I+ Q +H N++++
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 109
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++K ++V E++ NG+L +R +Q T + + AS + YL +G
Sbjct: 110 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMG-- 165
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YLF 186
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 166 -YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+T SDV+S+G+VL E+++ G+ P V A +E R+ P P L +L
Sbjct: 225 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL--ML 282
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGT 269
+ D N + E + + K +R G+
Sbjct: 283 DCWQKDRNNRPKFEQIVSILDKLIRNPGS 311
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG V G L VA+K K+ F + I+ Q +H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++K ++V E++ NG+L +R +Q T + + AS + YL +G
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMG-- 167
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YLF 186
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 168 -YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+T SDV+S+G+VL E+++ G+ P V A +E R+ P P L +L
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL--ML 284
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGT 269
+ D N + E + + K +R G+
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKLIRNPGS 313
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG V G L VA+K K+ F + I+ Q +H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++K ++V E++ NG+L +R +Q T + + AS + YL +G
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMG-- 167
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YLF 186
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 168 -YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+T SDV+S+G+VL E+++ G+ P V A +E R+ P P L +L
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL--ML 284
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGT 269
+ D N + E + + K +R G+
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKLIRNPGS 313
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG V G L VA+K K+ F + I+ Q +H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++K ++V E++ NG+L +R +Q T + + AS + YL +G
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMG-- 167
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YLF 186
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 168 -YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+T SDV+S+G+VL E+++ G+ P V A +E R+ P P L +L
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL--ML 284
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGT 269
+ D N + E + + K +R G+
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKLIRNPGS 313
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG V G L VA+K K+ F + I+ Q +H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++K ++V E++ NG+L +R +Q T + + AS + YL +G
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMG-- 167
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YLF 186
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 168 -YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+T SDV+S+G+VL E+++ G+ P V A +E R+ P P L +L
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL--ML 284
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGT 269
+ D N + E + + K +R G+
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKLIRNPGS 313
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG V G L VA+K K+ F + I+ Q +H N++++
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++K ++V E++ NG+L +R +Q T + + AS + YL +G
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMG-- 138
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YLF 186
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 139 -YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+T SDV+S+G+VL E+++ G+ P V A +E R+ P P L +L
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL--ML 255
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGT 269
+ D N + E + + K +R G+
Sbjct: 256 DCWQKDRNNRPKFEQIVSILDKLIRNPGS 284
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 45/285 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 75 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 129
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
++++ANIL+ D + K+ADF + LI ++ TA + + W PE Y +T KSD
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSD 188
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 189 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 229
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFW 292
N EE+ + +L C + +RPT D LR + E+F+
Sbjct: 230 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDFF 264
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG V G L VA+K K+ F + I+ Q +H N++++
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 99
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++K ++V E++ NG+L +R +Q T + + AS + YL +G
Sbjct: 100 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMG-- 155
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YLF 186
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 156 -YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 214
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+T SDV+S+G+VL E+++ G+ P V A +E R+ P P L +L
Sbjct: 215 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL--ML 272
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGT 269
+ D N + E + + K +R G+
Sbjct: 273 DCWQKDRNNRPKFEQIVSILDKLIRNPGS 301
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 43/289 (14%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
K + ++G G FG V K VA+K+ ++ + F ++R +S++NH N+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKD-VAIKQ---IESESERKAFIVELRQLSRVNHPNI 64
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLF------QHVRYQSSQVLKTWKTCLRIAAETASAL 121
VK+ G CL LV E+ G+L+ + + Y ++ +W CL+ + A
Sbjct: 65 VKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW--CLQCSQGVA--- 117
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATTTKEIETVGWL 180
YLHS+ +IH D+K N+LL T K+ DF ++ I +H T + W+
Sbjct: 118 -YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWM 171
Query: 181 DPEYL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLR 237
PE ++EK DV+S+G++L E++T + P + + + V +N R
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV--------HNGTR 223
Query: 238 QILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
L +N + IE L ++C ++RP+M ++ + + L R
Sbjct: 224 PPL-----IKNLPKPIE---SLMTRCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 43/289 (14%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
K + ++G G FG V K VA+K+ ++ + F ++R +S++NH N+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD-VAIKQ---IESESERKAFIVELRQLSRVNHPNI 63
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLF------QHVRYQSSQVLKTWKTCLRIAAETASAL 121
VK+ G CL LV E+ G+L+ + + Y ++ +W CL+ + A
Sbjct: 64 VKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW--CLQCSQGVA--- 116
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATTTKEIETVGWL 180
YLHS+ +IH D+K N+LL T K+ DF ++ I +H T + W+
Sbjct: 117 -YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWM 170
Query: 181 DPEYL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLR 237
PE ++EK DV+S+G++L E++T + P + + + V +N R
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV--------HNGTR 222
Query: 238 QILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
L +N + IE L ++C ++RP+M ++ + + L R
Sbjct: 223 PPL-----IKNLPKPIE---SLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPK----MVDKILINEVFQH-------KMRIISQIN- 63
LGEG FG V V+ + + KPK + K+L ++ + +M ++ I
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ E+ G L +++R + ++ T+K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ + A ++YL S IH D+ + N+L+ +N K+ADF + I++ D T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV++ E+ T G P Y + E+ +++
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLK- 273
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 274 -----EGHRMDKPANCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 287 LHEN 290
L N
Sbjct: 319 LTTN 322
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPK----MVDKILINEVFQH-------KMRIISQIN- 63
LGEG FG V V+ + + KPK + K+L ++ + +M ++ I
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ E+ G L +++R + ++ T+K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ + A ++YL S IH D+ + N+L+ +N K+ADF + I++ D T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV++ E+ T G P Y + E+ +++
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLK- 273
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 274 -----EGHRMDKPANCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 287 LHEN 290
L N
Sbjct: 319 LTTN 322
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
+G G FG V+ G + VA+K + + + E F + ++ +++H +V++ GVCL
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
E LV EF+ +G L ++R Q L +T L + + + YL +IH
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLE---EACVIHR 128
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+ + N L+ +N KV+DF + + DQ ++T V W PE + ++ KSD
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 193 VYSFGVVLVELLT-GKHP 209
V+SFGV++ E+ + GK P
Sbjct: 188 VWSFGVLMWEVFSEGKIP 205
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG V G L VA+K K+ F + I+ Q +H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++K ++V E + NG+L +R +Q T + + AS + YL +G+
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGA- 168
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YLF 186
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 169 --VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+T SDV+S+G+VL E+++ G+ P V A +E R+ P P L +L
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL--ML 284
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGT 269
+ D N + E + + K +R G+
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKLIRNPGS 313
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG V G L VA+K K+ F + I+ Q +H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++K ++V E++ NG+L +R +Q T + + AS + YL +G
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMG-- 167
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YLF 186
+H D+ + NIL++ N KV+DF + ++ + A TT+ + + W PE Y
Sbjct: 168 -YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+T SDV+S+G+VL E+++ G+ P V A +E R+ P P L +L
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL--ML 284
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGT 269
+ D N + E + + K +R G+
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKLIRNPGS 313
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPK----MVDKILINEVFQH-------KMRIISQIN- 63
LGEG FG V V+ + + KPK + K+L ++ + +M ++ I
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK 99
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ E+ G L +++R + ++ T+K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ + A ++YL S IH D+ + N+L+ +N K+ADF + I++ D T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV++ E+ T G P Y + E+ +++
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLK- 273
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 274 -----EGHRMDKPANCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 287 LHEN 290
L N
Sbjct: 319 LTTN 322
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPK----MVDKILINEVFQH-------KMRIISQIN- 63
LGEG FG V V+ + + KPK + K+L ++ + +M ++ I
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ E+ G L +++R + ++ T+K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ + A ++YL S IH D+ + N+L+ +N K+ADF + I++ D T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV++ E+ T G P Y + E+ +++
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLK- 273
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 274 -----EGHRMDKPANCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 287 LHEN 290
L N
Sbjct: 319 LTTN 322
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 133/298 (44%), Gaps = 52/298 (17%)
Query: 15 LLGEGGFGFVYKGVLPDNTL---VAVKKPKMVDKILINEVFQHKMRIISQI-NHKNVVKI 70
++GEG FG V K + + L A+K+ K + F ++ ++ ++ +H N++ +
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKT---------------WKTCLRIAA 115
LG C L E+ P+G L +R S+VL+T + L AA
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLR--KSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ A +DYL IH ++ + NIL+ +NY AK+ADF L + T
Sbjct: 147 DVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFG---LSRGQEVYVKKTMGRL 200
Query: 176 TVGWLDPE---YLFWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPI 231
V W+ E Y +T SDV+S+GV+L E+++ G P Y + E+ +P
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--YCGMTCAELYEKLP------ 252
Query: 232 ENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHE 289
+ L + LN DE V L +C R ERP+ Q+ L SL R+ E
Sbjct: 253 QGYRLEKPLN--CDDE--------VYDLMRQCWREKPYERPSFAQI---LVSLNRMLE 297
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + +L S
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFL---AS 149
Query: 130 PPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
+H D+ + N +LD+ +T KVADF A + D T V W+ E L
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 186 -FWTEKSDVYSFGVVLVELLTGKHP 209
+T KSDV+SFGV+L EL+T P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + +L S
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFL---AS 152
Query: 130 PPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
+H D+ + N +LD+ +T KVADF A + D T V W+ E L
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 186 -FWTEKSDVYSFGVVLVELLTGKHP 209
+T KSDV+SFGV+L EL+T P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 21/269 (7%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG V G L VA+K K+ F + I+ Q +H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++K ++V E++ NG+L +R +Q T + + AS + YL +G
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMG-- 167
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YLF 186
+H D+ + NIL++ N KV+DF ++ + A TT+ + + W PE Y
Sbjct: 168 -YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+T SDV+S+G+VL E+++ G+ P V A +E R+ P P L +L
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL--ML 284
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGT 269
+ D N + E + + K +R G+
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKLIRNPGS 313
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPK----MVDKILINEVFQH-------KMRIISQIN- 63
LGEG FG V V+ + + KPK + K+L ++ + +M ++ I
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ E+ G L +++R + ++ T+K
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ + A ++YL S IH D+ + N+L+ +N K+ADF + I++ D T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV++ E+ T G P Y + E+ +++
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLK- 273
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 274 -----EGHRMDKPANCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 287 LHEN 290
L N
Sbjct: 319 LTTN 322
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPK----MVDKILINEVFQH-------KMRIISQIN- 63
LGEG FG V V+ + + KPK + K+L ++ + +M ++ I
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ E+ G L +++R + ++ T+K
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ + A ++YL S IH D+ + N+L+ +N K+ADF + I++ D T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV++ E+ T G P Y + E+ +++
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLK- 273
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 274 -----EGHRMDKPANCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 287 LHEN 290
L N
Sbjct: 319 LTTN 322
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 40/284 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK-------KPKMVDKILINEVFQHKMRIISQINHKNVV 68
+G G FG VYKG + VAVK P+ + + F++++ ++ + H N++
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL------QAFKNEVGVLRKTRHVNIL 95
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+G + ++ + V ++ +L+ H+ ++ + IA +TA +DYLH+
Sbjct: 96 LFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA-- 150
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
IIH D+KS NI L ++ T K+ DF + + S + + ++ W+ PE +
Sbjct: 151 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 189 EK------SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+K SDVY+FG+VL EL+TG+ P S + +++ MV + + +R N
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDLSKVRS--NC 266
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
A + +L ++CL+ ERP Q+ ++ L R
Sbjct: 267 PKA----------MKRLMAECLKKKRDERPLFPQILASIELLAR 300
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + +L S
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFL---AS 151
Query: 130 PPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
+H D+ + N +LD+ +T KVADF A + D T V W+ E L
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 186 -FWTEKSDVYSFGVVLVELLTGKHP 209
+T KSDV+SFGV+L EL+T P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 40/284 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK-------KPKMVDKILINEVFQHKMRIISQINHKNVV 68
+G G FG VYKG + VAVK P+ + + F++++ ++ + H N++
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL------QAFKNEVGVLRKTRHVNIL 94
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+G + ++ + V ++ +L+ H+ ++ + IA +TA +DYLH+
Sbjct: 95 LFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA-- 149
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
IIH D+KS NI L ++ T K+ DF + + S + + ++ W+ PE +
Sbjct: 150 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 189 EK------SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+K SDVY+FG+VL EL+TG+ P S + +++ MV + + +R N
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDLSKVRS--NC 265
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
A + +L ++CL+ ERP Q+ ++ L R
Sbjct: 266 PKA----------MKRLMAECLKKKRDERPLFPQILASIELLAR 299
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 21/269 (7%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG V G L VA+K K+ F + I+ Q +H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++K ++V E + NG+L +R +Q T + + AS + YL +G
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMG-- 167
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YLF 186
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 168 -YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+T SDV+S+G+VL E+++ G+ P V A +E R+ P P L +L
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL--ML 284
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGT 269
+ D N + E + + K +R G+
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKLIRNPGS 313
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + +L S
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFL---AS 156
Query: 130 PPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
+H D+ + N +LD+ +T KVADF A + D T V W+ E L
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 186 -FWTEKSDVYSFGVVLVELLTGKHP 209
+T KSDV+SFGV+L EL+T P
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + +L S
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFL---AS 210
Query: 130 PPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
+H D+ + N +LD+ +T KVADF A + D T V W+ E L
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 186 -FWTEKSDVYSFGVVLVELLTGKHP 209
+T KSDV+SFGV+L EL+T P
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 40/284 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK-------KPKMVDKILINEVFQHKMRIISQINHKNVV 68
+G G FG VYKG + VAVK P+ + + F++++ ++ + H N++
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL------QAFKNEVGVLRKTRHVNIL 72
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+G + ++ + V ++ +L+ H+ ++ + IA +TA +DYLH+
Sbjct: 73 LFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA-- 127
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
IIH D+KS NI L ++ T K+ DF + + S + + ++ W+ PE +
Sbjct: 128 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 189 EK------SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+K SDVY+FG+VL EL+TG+ P S + +++ MV + + +R N
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDLSKVRS--NC 243
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
A + +L ++CL+ ERP Q+ ++ L R
Sbjct: 244 PKA----------MKRLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + +L S
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFL---AS 151
Query: 130 PPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
+H D+ + N +LD+ +T KVADF A + D T V W+ E L
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 186 -FWTEKSDVYSFGVVLVELLTGKHP 209
+T KSDV+SFGV+L EL+T P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 40/284 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK-------KPKMVDKILINEVFQHKMRIISQINHKNVV 68
+G G FG VYKG + VAVK P+ + + F++++ ++ + H N++
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL------QAFKNEVGVLRKTRHVNIL 72
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+G + ++ + V ++ +L+ H+ ++ + IA +TA +DYLH+
Sbjct: 73 LFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA-- 127
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
IIH D+KS NI L ++ T K+ DF + + S + + ++ W+ PE +
Sbjct: 128 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 189 EK------SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+K SDVY+FG+VL EL+TG+ P S + +++ MV + + +R N
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDLSKVRS--NC 243
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
A + +L ++CL+ ERP Q+ ++ L R
Sbjct: 244 PKA----------MKRLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 40/284 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK-------KPKMVDKILINEVFQHKMRIISQINHKNVV 68
+G G FG VYKG + VAVK P+ + + F++++ ++ + H N++
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL------QAFKNEVGVLRKTRHVNIL 69
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+G + ++ + V ++ +L+ H+ ++ + IA +TA +DYLH+
Sbjct: 70 LFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA-- 124
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
IIH D+KS NI L ++ T K+ DF + + S + + ++ W+ PE +
Sbjct: 125 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 189 EK------SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+K SDVY+FG+VL EL+TG+ P S + +++ MV + + +R N
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDLSKVRS--NC 240
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
A + +L ++CL+ ERP Q+ ++ L R
Sbjct: 241 PKA----------MKRLMAECLKKKRDERPLFPQILASIELLAR 274
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 21/269 (7%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG V G L VA+K K+ F + I+ Q +H N++++
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++K ++V E + NG+L +R +Q T + + AS + YL +G
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMG-- 138
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YLF 186
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 139 -YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+T SDV+S+G+VL E+++ G+ P V A +E R+ P P L +L
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL--ML 255
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGT 269
+ D N + E + + K +R G+
Sbjct: 256 DCWQKDRNNRPKFEQIVSILDKLIRNPGS 284
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 40/284 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK-------KPKMVDKILINEVFQHKMRIISQINHKNVV 68
+G G FG VYKG + VAVK P+ + + F++++ ++ + H N++
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL------QAFKNEVGVLRKTRHVNIL 67
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+G + ++ + V ++ +L+ H+ ++ + IA +TA +DYLH+
Sbjct: 68 LFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA-- 122
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
IIH D+KS NI L ++ T K+ DF + + S + + ++ W+ PE +
Sbjct: 123 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 189 EK------SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+K SDVY+FG+VL EL+TG+ P S + +++ MV + + +R N
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDLSKVRS--NC 238
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
A + +L ++CL+ ERP Q+ ++ L R
Sbjct: 239 PKA----------MKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 22/226 (9%)
Query: 16 LGEGGFGFVY----KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY KGV+ D T VA+K + F ++ ++ + N +VV+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVR-----YQSSQVLK--TWKTCLRIAAETASALD 122
+LGV + + L++ E + G L ++R +++ VL + +++A E A +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ +++T K+ DF + I D K + V W+ P
Sbjct: 138 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 183 EYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E L +T SDV+SFGVVL E+ T + P Y L++ ++ R V
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 238
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPK----MVDKILINEVFQH-------KMRIISQIN- 63
LGEG FG V V+ + + KPK + K+L ++ + +M ++ I
Sbjct: 32 LGEGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ E+ G L +++R + ++ T+K
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ + A ++YL S IH D+ + N+L+ +N K+ADF + I++ D T
Sbjct: 149 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV++ E+ T G P Y + E+ +++
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLK- 262
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 263 -----EGHRMDKPANCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 307
Query: 287 LHEN 290
L N
Sbjct: 308 LTTN 311
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 22/226 (9%)
Query: 16 LGEGGFGFVY----KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY KGV+ D T VA+K + F ++ ++ + N +VV+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVR-----YQSSQVLK--TWKTCLRIAAETASALD 122
+LGV + + L++ E + G L ++R +++ VL + +++A E A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ +++T K+ DF + I D K + V W+ P
Sbjct: 147 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 183 EYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E L +T SDV+SFGVVL E+ T + P Y L++ ++ R V
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 247
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 132/284 (46%), Gaps = 45/284 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G G V+ G +T VAVK K + + F + ++ Q+ H+ +V++ V
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ + ++ E++ NG+L ++ S L T L +AA+ A + ++ IH
Sbjct: 79 QEPI-YIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+++ANIL+ D + K+ADF + LI + TA + + W PE Y +T KSD
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF-PIKWTAPEAINYGTFTIKSD 192
Query: 193 VYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ-----VADE 247
V+SFG++L E++T H R PYP N I N + V +
Sbjct: 193 VWSFGILLTEIVT--HGR----------------IPYPGMTNP-EVIQNLERGYRMVRPD 233
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N EE+ + +L C + +RPT D LR + E+F
Sbjct: 234 NCPEELYQLMRL---CWKERPEDRPT-------FDYLRSVLEDF 267
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPK----MVDKILINEVFQH-------KMRIISQIN- 63
LGEG FG V V+ + + KPK + K+L ++ + +M ++ I
Sbjct: 35 LGEGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 91
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ E+ G L +++R + ++ T+K
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ + A ++YL S IH D+ + N+L+ +N K+ADF + I++ D T
Sbjct: 152 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV++ E+ T G P Y + E+ +++
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLK- 265
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 266 -----EGHRMDKPANCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 310
Query: 287 LHEN 290
L N
Sbjct: 311 LTTN 314
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + YL S
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYL---AS 150
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA------SSVLISSHDQTATTTKEIETVGWLDPE 183
+H D+ + N +LD+ +T KVADF S H++T V W+ E
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLP----VKWMALE 206
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L +T KSDV+SFGV+L EL+T P
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 135/284 (47%), Gaps = 40/284 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK-------KPKMVDKILINEVFQHKMRIISQINHKNVV 68
+G G FG VYKG + VAVK P+ + + F++++ ++ + H N++
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL------QAFKNEVGVLRKTRHVNIL 67
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+G ++ + V ++ +L+ H+ ++ + IA +TA +DYLH+
Sbjct: 68 LFMGYSTAPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA-- 122
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
IIH D+KS NI L ++ T K+ DF + + S + + ++ W+ PE +
Sbjct: 123 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 189 EK------SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+K SDVY+FG+VL EL+TG+ P S + +++ MV + + +R N
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDLSKVRS--NC 238
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
A + +L ++CL+ ERP Q+ ++ L R
Sbjct: 239 PKA----------MKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPK----MVDKILINEVFQH-------KMRIISQIN- 63
LGEG FG V V+ + + KPK + K+L ++ + +M ++ I
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ E+ G L +++R + ++ T+K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ + A ++YL S IH D+ + N+L+ +N ++ADF + I++ D T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV++ E+ T G P Y + E+ +++
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLK- 273
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 274 -----EGHRMDKPANCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 287 LHEN 290
L N
Sbjct: 319 LTTN 322
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILI-NEVFQHKMRIISQINHKNVV 68
LGEG FG V+ D LVAVK K D L + FQ + +++ + H+++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALK--DPTLAARKDFQREAELLTNLQHEHIV 80
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVL-------------KTWKTCLRIAA 115
K GVC + ++V+E++ +G L + +R + L IA+
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ AS + Y L S +H D+ + N L+ N K+ DF S + S D +
Sbjct: 141 QIASGMVY---LASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 176 TVGWLDPE---YLFWTEKSDVYSFGVVLVELLT-GKHP 209
+ W+ PE Y +T +SDV+SFGV+L E+ T GK P
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPK----MVDKILINEVFQH-------KMRIISQIN- 63
LGEG FG V V+ + + KPK + K+L ++ + +M ++ I
Sbjct: 30 LGEGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ E+ G L +++R + ++ T+K
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ + A ++YL S IH D+ + N+L+ +N K+ADF + I++ D T
Sbjct: 147 VSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV++ E+ T G P Y + E+ +++
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLK- 260
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 261 -----EGHRMDKPANCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 305
Query: 287 LHEN 290
L N
Sbjct: 306 LTTN 309
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + YL S
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYL---AS 151
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA------SSVLISSHDQTATTTKEIETVGWLDPE 183
+H D+ + N +LD+ +T KVADF S H++T V W+ E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP----VKWMALE 207
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L +T KSDV+SFGV+L EL+T P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPK----MVDKILINEVFQH-------KMRIISQIN- 63
LGEG FG V V+ + + KPK + K+L ++ + +M ++ I
Sbjct: 89 LGEGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 145
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ E+ G L +++R + ++ T+K
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ + A ++YL S IH D+ + N+L+ +N K+ADF + I++ D T
Sbjct: 206 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV++ E+ T G P Y + E+ +++
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLK- 319
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 320 -----EGHRMDKPANCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364
Query: 287 LHEN 290
L N
Sbjct: 365 LTTN 368
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + YL S
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYL---AS 150
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA------SSVLISSHDQTATTTKEIETVGWLDPE 183
+H D+ + N +LD+ +T KVADF S H++T V W+ E
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP----VKWMALE 206
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L +T KSDV+SFGV+L EL+T P
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + YL S
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYL---AS 143
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA------SSVLISSHDQTATTTKEIETVGWLDPE 183
+H D+ + N +LD+ +T KVADF S H++T V W+ E
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL----PVKWMALE 199
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L +T KSDV+SFGV+L EL+T P
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + YL S
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYL---AS 148
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA------SSVLISSHDQTATTTKEIETVGWLDPE 183
+H D+ + N +LD+ +T KVADF S H++T V W+ E
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL----PVKWMALE 204
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L +T KSDV+SFGV+L EL+T P
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + YL S
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYL---AS 170
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA------SSVLISSHDQTATTTKEIETVGWLDPE 183
+H D+ + N +LD+ +T KVADF S H++T V W+ E
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP----VKWMALE 226
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L +T KSDV+SFGV+L EL+T P
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + YL S
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYL---AS 149
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA------SSVLISSHDQTATTTKEIETVGWLDPE 183
+H D+ + N +LD+ +T KVADF S H++T V W+ E
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL----PVKWMALE 205
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L +T KSDV+SFGV+L EL+T P
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + YL S
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYL---AS 169
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA------SSVLISSHDQTATTTKEIETVGWLDPE 183
+H D+ + N +LD+ +T KVADF S H++T V W+ E
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP----VKWMALE 225
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L +T KSDV+SFGV+L EL+T P
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + YL S
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYL---AS 151
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA------SSVLISSHDQTATTTKEIETVGWLDPE 183
+H D+ + N +LD+ +T KVADF S H++T V W+ E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP----VKWMALE 207
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L +T KSDV+SFGV+L EL+T P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 15 LLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G FG VY G L DN AVK + I F + I+ +H NV+ +
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
LG+CL ++ PL+V ++ +G L +R ++ T K + + A + YL S
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYL---AS 146
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA------SSVLISSHDQTATTTKEIETVGWLDPE 183
+H D+ + N +LD+ +T KVADF S H++T V W+ E
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL----PVKWMALE 202
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L +T KSDV+SFGV+L EL+T P
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 144/298 (48%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 10 FEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 68
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ EF+P G+L ++++ ++ L+ ++
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI--KLLQYTSQI 126
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 127 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 244 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 131/301 (43%), Gaps = 54/301 (17%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQIN-HKNVV 68
LG G FG V + G+ ++ + VAVK K E +++I+S + H+N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHS-- 126
+LG C L++ E+ G L +R + S+VL+T IA TAS D LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLR-RKSRVLET-DPAFAIANSTASTRDLLHFSS 171
Query: 127 --------LGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVG 178
L S IH DV + N+LL + + AK+ DF + I + V
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 231
Query: 179 WLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP--IEN 233
W+ PE +F +T +SDV+S+G++L E+ + L N PYP + N
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN---------PYPGILVN 273
Query: 234 NSLRQILNFQVADENEMEEIEIVAK----LASKCLRTSGTERPTMRQVS----EQLDSLR 285
+ ++ V D +M + K + C T RPT +Q+ EQ R
Sbjct: 274 SKFYKL----VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 329
Query: 286 R 286
R
Sbjct: 330 R 330
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 135/284 (47%), Gaps = 40/284 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK-------KPKMVDKILINEVFQHKMRIISQINHKNVV 68
+G G FG VYKG + VAVK P+ + + F++++ ++ + H N++
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL------QAFKNEVGVLRKTRHVNIL 87
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+G + ++ + V ++ +L+ H+ ++ + IA +TA +DYLH+
Sbjct: 88 LFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA-- 142
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
IIH D+KS NI L ++ T K+ DF + S + + ++ W+ PE +
Sbjct: 143 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 189 EK------SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+K SDVY+FG+VL EL+TG+ P S + +++ MV + + +R N
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDLSKVRS--NC 258
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
A + +L ++CL+ ERP Q+ ++ L R
Sbjct: 259 PKA----------MKRLMAECLKKKRDERPLFPQILASIELLAR 292
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 135/284 (47%), Gaps = 40/284 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK-------KPKMVDKILINEVFQHKMRIISQINHKNVV 68
+G G FG VYKG + VAVK P+ + + F++++ ++ + H N++
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL------QAFKNEVGVLRKTRHVNIL 95
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+G + ++ + V ++ +L+ H+ ++ + IA +TA +DYLH+
Sbjct: 96 LFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA-- 150
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
IIH D+KS NI L ++ T K+ DF + S + + ++ W+ PE +
Sbjct: 151 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 189 EK------SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+K SDVY+FG+VL EL+TG+ P S + +++ MV + + +R N
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDLSKVRS--NC 266
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
A + +L ++CL+ ERP Q+ ++ L R
Sbjct: 267 PKA----------MKRLMAECLKKKRDERPLFPQILASIELLAR 300
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 135/284 (47%), Gaps = 40/284 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK-------KPKMVDKILINEVFQHKMRIISQINHKNVV 68
+G G FG VYKG + VAVK P+ + + F++++ ++ + H N++
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL------QAFKNEVGVLRKTRHVNIL 67
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+G + ++ + V ++ +L+ H+ ++ + IA +TA +DYLH+
Sbjct: 68 LFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA-- 122
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
IIH D+KS NI L ++ T K+ DF + S + + ++ W+ PE +
Sbjct: 123 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 189 EK------SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+K SDVY+FG+VL EL+TG+ P S + +++ MV + + +R N
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDLSKVRS--NC 238
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
A + +L ++CL+ ERP Q+ ++ L R
Sbjct: 239 PKA----------MKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 22/226 (9%)
Query: 16 LGEGGFGFVY----KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY KGV+ D T VA+K + F ++ ++ + N +VV+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVR-----YQSSQVLK--TWKTCLRIAAETASALD 122
+LGV + + L++ E + G L ++R +++ VL + +++A E A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ +++T K+ DF + I D K + V W+ P
Sbjct: 140 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 183 EYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E L +T SDV+SFGVVL E+ T + P Y L++ ++ R V
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 240
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 135/288 (46%), Gaps = 40/288 (13%)
Query: 15 LLGEGGFGFVYKGVLP--DNT--LVAVKKPKMVDKILINEV--FQHKMRIISQINHKNVV 68
+LGEG FG V +G L D T VAVK K+ D E+ F + + +H NV+
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKL-DNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 69 KILGVCLETKV-----PLLVYEFVPNGTLFQHVRYQSSQVLKT---WKTCLRIAAETASA 120
++LGVC+E P+++ F+ G L ++ Y + +T L+ + A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL + +H D+ + N +L D+ T VADF S I S D V W+
Sbjct: 160 MEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 181 DPEYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSL 236
E L +T KSDV++FGV + E+ T G P Y + ++EM + Y + + L
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTP--YPGVQNHEM------YDYLLHGHRL 268
Query: 237 RQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+Q E+ ++E+ ++ C RT +RPT + QL+ L
Sbjct: 269 KQ-------PEDCLDEL---YEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 22/226 (9%)
Query: 16 LGEGGFGFVY----KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY KGV+ D T VA+K + F ++ ++ + N +VV+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVR-----YQSSQVLK--TWKTCLRIAAETASALD 122
+LGV + + L++ E + G L ++R +++ VL + +++A E A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ +++T K+ DF + I D K + V W+ P
Sbjct: 147 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 183 EYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E L +T SDV+SFGVVL E+ T + P Y L++ ++ R V
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 247
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 22/226 (9%)
Query: 16 LGEGGFGFVY----KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY KGV+ D T VA+K + F ++ ++ + N +VV+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVR-----YQSSQVLK--TWKTCLRIAAETASALD 122
+LGV + + L++ E + G L ++R +++ VL + +++A E A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ +++T K+ DF + I D K + V W+ P
Sbjct: 146 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 183 EYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E L +T SDV+SFGVVL E+ T + P Y L++ ++ R V
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 246
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPK----MVDKILINEVFQH-------KMRIISQIN- 63
LGEG FG V V+ + + KPK + K+L ++ + +M ++ I
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ + G L +++R + ++ T+K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ + A ++YL S IH D+ + N+L+ +N K+ADF + I++ D T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV++ E+ T G P Y + E+ +++
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLK- 273
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 274 -----EGHRMDKPANCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 287 LHEN 290
L N
Sbjct: 319 LTTN 322
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 22/226 (9%)
Query: 16 LGEGGFGFVY----KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY KGV+ D T VA+K + F ++ ++ + N +VV+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVR-----YQSSQVLK--TWKTCLRIAAETASALD 122
+LGV + + L++ E + G L ++R +++ VL + +++A E A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ +++T K+ DF + I D K + V W+ P
Sbjct: 153 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 183 EYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E L +T SDV+SFGVVL E+ T + P Y L++ ++ R V
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 253
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 22/226 (9%)
Query: 16 LGEGGFGFVY----KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY KGV+ D T VA+K + F ++ ++ + N +VV+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVR-----YQSSQVLK--TWKTCLRIAAETASALD 122
+LGV + + L++ E + G L ++R +++ VL + +++A E A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ +++T K+ DF + I D K + V W+ P
Sbjct: 146 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 183 EYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E L +T SDV+SFGVVL E+ T + P Y L++ ++ R V
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 246
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 22/226 (9%)
Query: 16 LGEGGFGFVY----KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY KGV+ D T VA+K + F ++ ++ + N +VV+
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVR-----YQSSQVLK--TWKTCLRIAAETASALD 122
+LGV + + L++ E + G L ++R +++ VL + +++A E A +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ +++T K+ DF + I D K + V W+ P
Sbjct: 175 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 183 EYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E L +T SDV+SFGVVL E+ T + P Y L++ ++ R V
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 275
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 22/226 (9%)
Query: 16 LGEGGFGFVY----KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY KGV+ D T VA+K + F ++ ++ + N +VV+
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVR-----YQSSQVLK--TWKTCLRIAAETASALD 122
+LGV + + L++ E + G L ++R +++ VL + +++A E A +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ +++T K+ DF + I D K + V W+ P
Sbjct: 144 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 183 EYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E L +T SDV+SFGVVL E+ T + P Y L++ ++ R V
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 244
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPK----MVDKILINEVFQH-------KMRIISQIN- 63
LGEG FG V V+ + + KPK + K+L ++ + +M ++ I
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ + G L +++R + ++ T+K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ + A ++YL S IH D+ + N+L+ +N K+ADF + I++ D T
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV++ E+ T G P Y + E+ +++
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLK- 273
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 274 -----EGHRMDKPANCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 287 LHEN 290
L N
Sbjct: 319 LTTN 322
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 61/308 (19%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKI----------------LINEVFQHKMRII 59
LGEG FG V VL + + KP V K+ LI+E+ M++I
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM--EMMKMI 90
Query: 60 SQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------T 106
+ HKN++ +LG C + ++ E+ G L ++++ + L+ +
Sbjct: 91 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLS 148
Query: 107 WKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
K + A + A ++YL S IH D+ + N+L+ ++ K+ADF + I D
Sbjct: 149 SKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDX 205
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTR 222
TT V W+ PE LF +T +SDV+SFGV+L E+ T G P Y + E+ +
Sbjct: 206 XKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFK 263
Query: 223 MVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLD 282
++ E + + + N NE+ + C ++RPT +Q+ E LD
Sbjct: 264 LLK------EGHRMDKPSNCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 283 SLRRLHEN 290
+ L N
Sbjct: 308 RIVALTSN 315
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 107/203 (52%), Gaps = 22/203 (10%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V G VA+K K + + + F + +++ ++H+ +V++ GVC
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 76 ETKVPLLVYEFVPNGTLFQHV-----RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+ + ++ E++ NG L ++ R+Q+ Q+L+ + + A++YL S
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE-------MCKDVCEAMEYLE---SK 139
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE- 189
+H D+ + N L++D KV+DF S + ++T++ + V W PE L +++
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF-PVRWSPPEVLMYSKF 198
Query: 190 --KSDVYSFGVVLVELLT-GKHP 209
KSD+++FGV++ E+ + GK P
Sbjct: 199 SSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 61/308 (19%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKI----------------LINEVFQHKMRII 59
LGEG FG V VL + + KP V K+ LI+E+ M++I
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM--EMMKMI 79
Query: 60 SQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------T 106
+ HKN++ +LG C + ++ E+ G L ++++ + L+ +
Sbjct: 80 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 137
Query: 107 WKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
K + A + A ++YL S IH D+ + N+L+ ++ K+ADF + I D
Sbjct: 138 SKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 194
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTR 222
TT V W+ PE LF +T +SDV+SFGV+L E+ T G P Y + E+ +
Sbjct: 195 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFK 252
Query: 223 MVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLD 282
++ E + + + N NE+ + C ++RPT +Q+ E LD
Sbjct: 253 LLK------EGHRMDKPSNCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLD 296
Query: 283 SLRRLHEN 290
+ L N
Sbjct: 297 RIVALTSN 304
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 61/308 (19%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKI----------------LINEVFQHKMRII 59
LGEG FG V VL + + KP V K+ LI+E+ M++I
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM--EMMKMI 82
Query: 60 SQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------T 106
+ HKN++ +LG C + ++ E+ G L ++++ + L+ +
Sbjct: 83 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 140
Query: 107 WKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
K + A + A ++YL S IH D+ + N+L+ ++ K+ADF + I D
Sbjct: 141 SKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 197
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTR 222
TT V W+ PE LF +T +SDV+SFGV+L E+ T G P Y + E+ +
Sbjct: 198 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFK 255
Query: 223 MVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLD 282
++ E + + + N NE+ + C ++RPT +Q+ E LD
Sbjct: 256 LLK------EGHRMDKPSNCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLD 299
Query: 283 SLRRLHEN 290
+ L N
Sbjct: 300 RIVALTSN 307
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 61/308 (19%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKI----------------LINEVFQHKMRII 59
LGEG FG V VL + + KP V K+ LI+E+ M++I
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM--EMMKMI 90
Query: 60 SQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------T 106
+ HKN++ +LG C + ++ E+ G L ++++ + L+ +
Sbjct: 91 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLS 148
Query: 107 WKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
K + A + A ++YL S IH D+ + N+L+ ++ K+ADF + I D
Sbjct: 149 SKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 205
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTR 222
TT V W+ PE LF +T +SDV+SFGV+L E+ T G P Y + E+ +
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFK 263
Query: 223 MVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLD 282
++ E + + + N NE+ + C ++RPT +Q+ E LD
Sbjct: 264 LLK------EGHRMDKPSNCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 283 SLRRLHEN 290
+ L N
Sbjct: 308 RIVALTSN 315
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 61/308 (19%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKI----------------LINEVFQHKMRII 59
LGEG FG V VL + + KP V K+ LI+E+ M++I
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM--EMMKMI 131
Query: 60 SQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------T 106
+ HKN++ +LG C + ++ E+ G L ++++ + L+ +
Sbjct: 132 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 189
Query: 107 WKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
K + A + A ++YL S IH D+ + N+L+ ++ K+ADF + I D
Sbjct: 190 SKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 246
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTR 222
TT V W+ PE LF +T +SDV+SFGV+L E+ T G P Y + E+ +
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFK 304
Query: 223 MVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLD 282
++ E + + + N NE+ + C ++RPT +Q+ E LD
Sbjct: 305 LLK------EGHRMDKPSNCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLD 348
Query: 283 SLRRLHEN 290
+ L N
Sbjct: 349 RIVALTSN 356
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 134/304 (44%), Gaps = 53/304 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEV-----------FQHKMRIISQIN- 63
LGEG FG V VL + + KP V K+ + + +M ++ I
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------TWKTC 110
HKN++ +LG C + ++ E+ G L ++++ + L+ + K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 111 LRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT 170
+ A + A ++YL S IH D+ + N+L+ ++ K+ADF + I D T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 171 TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY 226
T V W+ PE LF +T +SDV+SFGV+L E+ T G P Y + E+ +++
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLK- 266
Query: 227 FPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
E + + + N NE+ + C ++RPT +Q+ E LD +
Sbjct: 267 -----EGHRMDKPSNCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
Query: 287 LHEN 290
L N
Sbjct: 312 LTSN 315
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 144/298 (48%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 68
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ + ++ L+ ++
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI--KLLQYTSQI 126
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 127 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 244 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 22/226 (9%)
Query: 16 LGEGGFGFVY----KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY KGV+ D T VA+K + F ++ ++ + N +VV+
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVR-----YQSSQVLK--TWKTCLRIAAETASALD 122
+LGV + + L++ E + G L ++R ++ VL + +++A E A +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ +++T K+ DF + I D K + V W+ P
Sbjct: 143 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 183 EYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E L +T SDV+SFGVVL E+ T + P Y L++ ++ R V
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 243
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 36/275 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
+G+G FG V G N VAVK + + F + +++Q+ H N+V++LGV +
Sbjct: 201 IGKGEFGDVMLGDYRGNK-VAVK---CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 76 ETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIH 134
E K L +V E++ G+L ++R + VL L+ + + A++YL +H
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG-DCLLKFSLDVCEAMEYLEGNN---FVH 312
Query: 135 GDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF---WTEKS 191
D+ + N+L+ ++ AKV+DF + SS T V W PE L ++ KS
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFSTKS 367
Query: 192 DVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM 250
DV+SFG++L E+ + G+ VPY P+++ R +++ +
Sbjct: 368 DVWSFGILLWEIYSFGR----------------VPYPRIPLKDVVPRVEKGYKMDAPDGC 411
Query: 251 EEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
V + C RPT Q+ EQL+ +R
Sbjct: 412 P--PAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 46/287 (16%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQH---KMRIISQINHKNVVKIL 71
++G GGFG VY+ + VAVK + I++ ++ + ++ + + H N++ +
Sbjct: 14 IIGIGGFGKVYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 72 GVCLETKVPLLVYEFVPNGTLFQHVRYQ--SSQVLKTWKTCLRIAAETASALDYLHSLGS 129
GVCL+ LV EF G L + + + +L W A + A ++YLH
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAI 126
Query: 130 PPIIHGDVKSANILL--------DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLD 181
PIIH D+KS+NIL+ N K+ DF ++ T W+
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFG----LAREWHRTTKMSAAGAYAWMA 182
Query: 182 PEYL---FWTEKSDVYSFGVVLVELLTGKHP-RSYVALASNEMTRMVPYFPYPIENNSLR 237
PE + +++ SDV+S+GV+L ELLTG+ P R LA Y + N L
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA----------VAYGVAMNKLA 232
Query: 238 QILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+ E AKL C RP+ + +QL ++
Sbjct: 233 LPIPSTCP--------EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 61/308 (19%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKI----------------LINEVFQHKMRII 59
LGEG FG V VL + + KP V K+ LI+E+ M++I
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM--EMMKMI 90
Query: 60 SQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------T 106
+ HKN++ +LG C + ++ E+ G L ++++ + L+ +
Sbjct: 91 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 148
Query: 107 WKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
K + A + A ++YL S IH D+ + N+L+ ++ K+ADF + I D
Sbjct: 149 SKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 205
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTR 222
TT V W+ PE LF +T +SDV+SFGV+L E+ T G P Y + E+ +
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFK 263
Query: 223 MVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLD 282
++ E + + + N NE+ + C ++RPT +Q+ E LD
Sbjct: 264 LLK------EGHRMDKPSNCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 283 SLRRLHEN 290
+ L N
Sbjct: 308 RIVALTSN 315
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 61/308 (19%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKI----------------LINEVFQHKMRII 59
LGEG FG V VL + + KP V K+ LI+E+ M++I
Sbjct: 21 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM--EMMKMI 75
Query: 60 SQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------T 106
+ HKN++ +LG C + ++ E+ G L ++++ + L+ +
Sbjct: 76 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS 133
Query: 107 WKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
K + A + A ++YL S IH D+ + N+L+ ++ K+ADF + I D
Sbjct: 134 SKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 190
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTR 222
TT V W+ PE LF +T +SDV+SFGV+L E+ T G P Y + E+ +
Sbjct: 191 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFK 248
Query: 223 MVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLD 282
++ E + + + N NE+ + C ++RPT +Q+ E LD
Sbjct: 249 LLK------EGHRMDKPSNCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLD 292
Query: 283 SLRRLHEN 290
+ L N
Sbjct: 293 RIVALTSN 300
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 22/226 (9%)
Query: 16 LGEGGFGFVY----KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY KGV+ D T VA+K + F ++ ++ + N +VV+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVR-----YQSSQVLK--TWKTCLRIAAETASALD 122
+LGV + + L++ E + G L ++R ++ VL + +++A E A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ +++T K+ DF + I D K + V W+ P
Sbjct: 153 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 183 EYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E L +T SDV+SFGVVL E+ T + P Y L++ ++ R V
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 253
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 61/308 (19%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKI----------------LINEVFQHKMRII 59
LGEG FG V VL + + KP V K+ LI+E+ M++I
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM--EMMKMI 83
Query: 60 SQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK-------------T 106
+ HKN++ +LG C + ++ E+ G L ++++ + L+ +
Sbjct: 84 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 141
Query: 107 WKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
K + A + A ++YL S IH D+ + N+L+ ++ K+ADF + I D
Sbjct: 142 SKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 198
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTR 222
TT V W+ PE LF +T +SDV+SFGV+L E+ T G P Y + E+ +
Sbjct: 199 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFK 256
Query: 223 MVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLD 282
++ E + + + N NE+ + C ++RPT +Q+ E LD
Sbjct: 257 LLK------EGHRMDKPSNCT----NEL------YMMMRDCWHAVPSQRPTFKQLVEDLD 300
Query: 283 SLRRLHEN 290
+ L N
Sbjct: 301 RIVALTSN 308
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 22/226 (9%)
Query: 16 LGEGGFGFVY----KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY KGV+ D T VA+K + F ++ ++ + N +VV+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVR-----YQSSQVLK--TWKTCLRIAAETASALD 122
+LGV + + L++ E + G L ++R +++ VL + +++A E A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N + +++T K+ DF + I D K + V W+ P
Sbjct: 140 YLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 183 EYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E L +T SDV+SFGVVL E+ T + P Y L++ ++ R V
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 240
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 106/203 (52%), Gaps = 22/203 (10%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V G VA+K K + + + F + +++ ++H+ +V++ GVC
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 76 ETKVPLLVYEFVPNGTLFQHV-----RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+ + ++ E++ NG L ++ R+Q+ Q+L+ + + A++YL S
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE-------MCKDVCEAMEYLE---SK 123
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE- 189
+H D+ + N L++D KV+DF S + + T++ + V W PE L +++
Sbjct: 124 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRWSPPEVLMYSKF 182
Query: 190 --KSDVYSFGVVLVELLT-GKHP 209
KSD+++FGV++ E+ + GK P
Sbjct: 183 SSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 68
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 126
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 127 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 244 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 106/203 (52%), Gaps = 22/203 (10%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V G VA+K K + + + F + +++ ++H+ +V++ GVC
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 76 ETKVPLLVYEFVPNGTLFQHV-----RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+ + ++ E++ NG L ++ R+Q+ Q+L+ + + A++YL S
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE-------MCKDVCEAMEYLE---SK 124
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE- 189
+H D+ + N L++D KV+DF S + + T++ + V W PE L +++
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRWSPPEVLMYSKF 183
Query: 190 --KSDVYSFGVVLVELLT-GKHP 209
KSD+++FGV++ E+ + GK P
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 12 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 70
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 71 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 128
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 129 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 185
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 186 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 245
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 246 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 295
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 83
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 141
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 142 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 258
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 259 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 83
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 141
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 142 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 258
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 259 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 65
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 123
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 124 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 241 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 106/203 (52%), Gaps = 22/203 (10%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V G VA+K K + + + F + +++ ++H+ +V++ GVC
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 76 ETKVPLLVYEFVPNGTLFQHV-----RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+ + ++ E++ NG L ++ R+Q+ Q+L+ + + A++YL S
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE-------MCKDVCEAMEYLE---SK 119
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE- 189
+H D+ + N L++D KV+DF S + + T++ + V W PE L +++
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRWSPPEVLMYSKF 178
Query: 190 --KSDVYSFGVVLVELLT-GKHP 209
KSD+++FGV++ E+ + GK P
Sbjct: 179 SSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 11 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 69
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 127
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 128 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 184
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 185 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 244
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 245 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 294
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 6 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 64
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 122
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 123 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 179
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 180 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 239
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 240 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 289
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 63
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 121
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 122 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 178
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 179 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 238
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 239 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 288
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 65
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 123
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 124 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 241 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 13 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 71
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 72 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 129
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 130 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 186
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 187 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 246
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 247 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 296
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 96
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 97 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 154
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 155 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 211
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 212 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 272 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 321
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 106/203 (52%), Gaps = 22/203 (10%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V G VA+K K + + + F + +++ ++H+ +V++ GVC
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 76 ETKVPLLVYEFVPNGTLFQHV-----RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+ + ++ E++ NG L ++ R+Q+ Q+L+ + + A++YL S
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE-------MCKDVCEAMEYLE---SK 139
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE- 189
+H D+ + N L++D KV+DF S + + T++ + V W PE L +++
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRWSPPEVLMYSKF 198
Query: 190 --KSDVYSFGVVLVELLT-GKHP 209
KSD+++FGV++ E+ + GK P
Sbjct: 199 SSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 106/203 (52%), Gaps = 22/203 (10%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V G VA+K K + + + F + +++ ++H+ +V++ GVC
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 76 ETKVPLLVYEFVPNGTLFQHV-----RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+ + ++ E++ NG L ++ R+Q+ Q+L+ + + A++YL S
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE-------MCKDVCEAMEYLE---SK 130
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE- 189
+H D+ + N L++D KV+DF S + + T++ + V W PE L +++
Sbjct: 131 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRWSPPEVLMYSKF 189
Query: 190 --KSDVYSFGVVLVELLT-GKHP 209
KSD+++FGV++ E+ + GK P
Sbjct: 190 SSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 130/301 (43%), Gaps = 54/301 (17%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQIN-HKNVV 68
LG G FG V + G+ ++ + VAVK K E +++I+S + H+N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHS-- 126
+LG C L++ E+ G L +R + S+VL+T IA T S D LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLR-RKSRVLET-DPAFAIANSTLSTRDLLHFSS 171
Query: 127 --------LGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVG 178
L S IH DV + N+LL + + AK+ DF + I + V
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 231
Query: 179 WLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP--IEN 233
W+ PE +F +T +SDV+S+G++L E+ + L N PYP + N
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN---------PYPGILVN 273
Query: 234 NSLRQILNFQVADENEMEEIEIVAK----LASKCLRTSGTERPTMRQVS----EQLDSLR 285
+ ++ V D +M + K + C T RPT +Q+ EQ R
Sbjct: 274 SKFYKL----VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 329
Query: 286 R 286
R
Sbjct: 330 R 330
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 14 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 72
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 73 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 130
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 131 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 187
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 188 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 247
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 248 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 297
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 106/203 (52%), Gaps = 22/203 (10%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V G VA+K K + + + F + +++ ++H+ +V++ GVC
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 76 ETKVPLLVYEFVPNGTLFQHV-----RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+ + ++ E++ NG L ++ R+Q+ Q+L+ + + A++YL S
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE-------MCKDVCEAMEYLE---SK 124
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE- 189
+H D+ + N L++D KV+DF S + + T++ + V W PE L +++
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKF-PVRWSPPEVLMYSKF 183
Query: 190 --KSDVYSFGVVLVELLT-GKHP 209
KSD+++FGV++ E+ + GK P
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 27/220 (12%)
Query: 12 KRHLLGEGGFGFVYKGV-LPDNTLVAVKKP---KMVDKILINEVFQ---HKMRIISQINH 64
K +LG G FG V+KGV +P+ ++K P K+++ + FQ M I ++H
Sbjct: 35 KLKVLGSGVFGTVHKGVWIPEGE--SIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 92
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
++V++LG+C + + L V +++P G+L HVR Q+L W + A
Sbjct: 93 AHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKG 145
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
+ YL G ++H ++ + N+LL +VADF + L+ D+ ++ + W+
Sbjct: 146 MYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALA 216
E + +T +SDV+S+GV + EL+T G P + + LA
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 242
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 65
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 123
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++YL G+ IH D+ + NIL+++ K+ DF + ++ + + E+
Sbjct: 124 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP 180
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 241 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 27/220 (12%)
Query: 12 KRHLLGEGGFGFVYKGV-LPDNTLVAVKKP---KMVDKILINEVFQ---HKMRIISQINH 64
K +LG G FG V+KGV +P+ ++K P K+++ + FQ M I ++H
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGE--SIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
++V++LG+C + + L V +++P G+L HVR Q+L W + A
Sbjct: 75 AHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKG 127
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
+ YL G ++H ++ + N+LL +VADF + L+ D+ ++ + W+
Sbjct: 128 MYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 184
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALA 216
E + +T +SDV+S+GV + EL+T G P + + LA
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 224
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 15 LLGEGGFGFVYKGVL----PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G G V G L + VA+K K F + I+ Q +H N++++
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++ ++V E++ NG+L +R Q T + + + + YL LG
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF--TIMQLVGMLRGVGAGMRYLSDLG-- 171
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+L+D N KV+DF S VL D TTT + W PE +
Sbjct: 172 -YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP 209
++ SDV+SFGVV+ E+L G+ P
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 15 LLGEGGFGFVYKGVLPDNTL----VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G+G FG VY G D A+K + ++ E F + ++ +NH NV+ +
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 71 LGVCLETK-VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+G+ L + +P ++ ++ +G L Q +R S Q T K + + A ++YL
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIR--SPQRNPTVKDLISFGLQVARGMEYL---AE 142
Query: 130 PPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
+H D+ + N +LD+++T KVADF A +L + V W E L
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 186 -FWTEKSDVYSFGVVLVELLTGKHP 209
+T KSDV+SFGV+L ELLT P
Sbjct: 203 YRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 118/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L++ + +P G L +VR SQ L W C++I A
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 131
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 234
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 36/275 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
+G+G FG V G N VAVK + + F + +++Q+ H N+V++LGV +
Sbjct: 14 IGKGEFGDVMLGDYRGNK-VAVK---CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 76 ETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIH 134
E K L +V E++ G+L ++R + VL L+ + + A++YL +H
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG-DCLLKFSLDVCEAMEYLE---GNNFVH 125
Query: 135 GDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF---WTEKS 191
D+ + N+L+ ++ AKV+DF + SS T V W PE L ++ KS
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFSTKS 180
Query: 192 DVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM 250
DV+SFG++L E+ + G+ VPY P+++ R +++ +
Sbjct: 181 DVWSFGILLWEIYSFGR----------------VPYPRIPLKDVVPRVEKGYKMDAPDGC 224
Query: 251 EEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
V ++ C RP+ Q+ EQL+ ++
Sbjct: 225 P--PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 36/275 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
+G+G FG V G N VAVK + + F + +++Q+ H N+V++LGV +
Sbjct: 29 IGKGEFGDVMLGDYRGNK-VAVK---CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 76 ETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIH 134
E K L +V E++ G+L ++R + VL L+ + + A++YL +H
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG-DCLLKFSLDVCEAMEYLE---GNNFVH 140
Query: 135 GDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF---WTEKS 191
D+ + N+L+ ++ AKV+DF + SS T V W PE L ++ KS
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFSTKS 195
Query: 192 DVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM 250
DV+SFG++L E+ + G+ VPY P+++ R +++ +
Sbjct: 196 DVWSFGILLWEIYSFGR----------------VPYPRIPLKDVVPRVEKGYKMDAPDGC 239
Query: 251 EEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
V ++ C RP+ Q+ EQL+ ++
Sbjct: 240 P--PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 38/277 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ +T VAVK M + E F + ++ + H +VK+ V
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKT--MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV- 79
Query: 76 ETKVPL-LVYEFVPNGTLFQHVRYQ--SSQVLKTWKTCLRIAAETASALDYLHSLGSPPI 132
TK P+ ++ EF+ G+L ++ S Q L + +A+ A + ++
Sbjct: 80 -TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK---LIDFSAQIAEGMAFIEQRN---Y 132
Query: 133 IHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTE 189
IH D+++ANIL+ + K+ADF + +I ++ TA + + W PE + +T
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTI 191
Query: 190 KSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY-FPYPIENNSLRQILNFQVADE 247
KSDV+SFG++L+E++T G+ P Y +++ E+ R + + P N ++ N +
Sbjct: 192 KSDVWSFGILLMEIVTYGRIP--YPGMSNPEVIRALERGYRMPRPENCPEELYNIMM--- 246
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+C + ERPT + LD
Sbjct: 247 --------------RCWKNRPEERPTFEYIQSVLDDF 269
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 36/275 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
+G+G FG V G N VAVK + + F + +++Q+ H N+V++LGV +
Sbjct: 20 IGKGEFGDVMLGDYRGNK-VAVK---CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 76 ETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIH 134
E K L +V E++ G+L ++R + VL L+ + + A++YL +H
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG-DCLLKFSLDVCEAMEYLE---GNNFVH 131
Query: 135 GDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL---FWTEKS 191
D+ + N+L+ ++ AKV+DF + SS T V W PE L ++ KS
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREAAFSTKS 186
Query: 192 DVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENEM 250
DV+SFG++L E+ + G+ VPY P+++ R +++ +
Sbjct: 187 DVWSFGILLWEIYSFGR----------------VPYPRIPLKDVVPRVEKGYKMDAPDGC 230
Query: 251 EEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
V ++ C RP+ Q+ EQL+ ++
Sbjct: 231 P--PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 118/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L++ + +P G L +VR SQ L W C++I A
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 131
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 234
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 15 LLGEGGFGFVYKGVL----PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
++G G G V G L + VA+K K F + I+ Q +H N++++
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
GV ++ ++V E++ NG+L +R Q T + + + + YL LG
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF--TIMQLVGMLRGVGAGMRYLSDLG-- 171
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+L+D N KV+DF S VL D TTT + W PE +
Sbjct: 172 -YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP 209
++ SDV+SFGVV+ E+L G+ P
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 118/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L++ + +P G L +VR SQ L W C++I A
Sbjct: 81 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 133
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 134 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 236
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 126/285 (44%), Gaps = 38/285 (13%)
Query: 14 HLLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
++G G FG V G L + VA+K K+ F + I+ Q +H NVV
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ GV K ++V EF+ NG L +R Q T + + A+ + YL +G
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQF--TVIQLVGMLRGIAAGMRYLADMG- 165
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTA-TTTKEIETVGWLDPE---YL 185
+H D+ + NIL++ N KV+DF S +I + TTT V W PE Y
Sbjct: 166 --YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 186 FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVP---YFPYPIENNSLRQILN 241
+T SDV+S+G+V+ E+++ G+ P Y +++ ++ + + P P++ +
Sbjct: 224 KFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQDVIKAIEEGYRLPAPMDCPAG----- 276
Query: 242 FQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
+ +L C + ERP Q+ LD + R
Sbjct: 277 --------------LHQLMLDCWQKERAERPKFEQIVGILDKMIR 307
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 79 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 131
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 234
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 129
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 232
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 38/277 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ +T VAVK M + E F + ++ + H +VK+ V
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKT--MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV- 252
Query: 76 ETKVPL-LVYEFVPNGTLFQHVRYQ--SSQVLKTWKTCLRIAAETASALDYLHSLGSPPI 132
TK P+ ++ EF+ G+L ++ S Q L + +A+ A + ++
Sbjct: 253 -TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK---LIDFSAQIAEGMAFIEQRN---Y 305
Query: 133 IHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTE 189
IH D+++ANIL+ + K+ADF + +I ++ TA + + W PE + +T
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTI 364
Query: 190 KSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY-FPYPIENNSLRQILNFQVADE 247
KSDV+SFG++L+E++T G+ P Y +++ E+ R + + P N ++ N +
Sbjct: 365 KSDVWSFGILLMEIVTYGRIP--YPGMSNPEVIRALERGYRMPRPENCPEELYNIMM--- 419
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+C + ERPT + LD
Sbjct: 420 --------------RCWKNRPEERPTFEYIQSVLDDF 442
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I + +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAML 62
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 143/298 (47%), Gaps = 36/298 (12%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT +VAVKK + + + + F+ ++ I+
Sbjct: 8 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEIL 66
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+ H N+VK GVC + L+ E++P G+L +++ ++ L+ ++
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQI 124
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET- 176
++Y LG+ IH ++ + NIL+++ K+ DF + ++ + + E+
Sbjct: 125 CKGMEY---LGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP 181
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-----GKHPRSYVALASNE-MTRMVPYF 227
+ W PE L ++ SDV+SFGVVL EL T P ++ + N+ +M+ +
Sbjct: 182 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 241
Query: 228 PYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
+ N+ R DE + + ++C + +RP+ R ++ ++D +R
Sbjct: 242 LIELLKNNGRLPRPDGCPDE--------IYMIMTECWNNNVNQRPSFRDLALRVDQIR 291
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 136
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 137 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 239
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 118/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L++ + +P G L +VR SQ L W C++I A
Sbjct: 78 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 130
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 131 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 233
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 118/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L++ + +P G L +VR SQ L W C++I A
Sbjct: 77 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 129
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 232
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 62
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 118/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L++ + +P G L +VR SQ L W C++I A
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 131
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 234
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 118/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L++ + +P G L +VR SQ L W C++I A
Sbjct: 80 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 132
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 133 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 235
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 118/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L++ + +P G L +VR SQ L W C++I A
Sbjct: 81 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 133
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 134 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 236
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 111/215 (51%), Gaps = 25/215 (11%)
Query: 9 NYDKRHL-----LGEGGFGFVYKGVLP---DNT--LVAVK--KPKMVDKILINEVFQHKM 56
+++KR L LGEG FG V DNT VAVK KP+ + + + ++
Sbjct: 17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD--LKKEI 74
Query: 57 RIISQINHKNVVKILGVCLETKVP--LLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
I+ + H+N+VK G+C E L+ EF+P+G+L +++ +++ K L+ A
Sbjct: 75 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI--NLKQQLKYA 132
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
+ +DYL GS +H D+ + N+L++ + K+ DF + I + + T +
Sbjct: 133 VQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 189
Query: 175 ET-VGWLDPEYLFWTE---KSDVYSFGVVLVELLT 205
++ V W PE L ++ SDV+SFGV L ELLT
Sbjct: 190 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 111/215 (51%), Gaps = 25/215 (11%)
Query: 9 NYDKRHL-----LGEGGFGFVYKGVLP---DNT--LVAVK--KPKMVDKILINEVFQHKM 56
+++KR L LGEG FG V DNT VAVK KP+ + + + ++
Sbjct: 5 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD--LKKEI 62
Query: 57 RIISQINHKNVVKILGVCLETKVP--LLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
I+ + H+N+VK G+C E L+ EF+P+G+L +++ +++ K L+ A
Sbjct: 63 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI--NLKQQLKYA 120
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
+ +DYL GS +H D+ + N+L++ + K+ DF + I + + T +
Sbjct: 121 VQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 177
Query: 175 ET-VGWLDPEYLFWTE---KSDVYSFGVVLVELLT 205
++ V W PE L ++ SDV+SFGV L ELLT
Sbjct: 178 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 118/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L++ + +P G L +VR SQ L W C++I A
Sbjct: 78 PHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW--CVQI----AKG 130
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 131 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 31/226 (13%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKIL-------INEVFQHKMRIISQINHKN 66
+LG G FG VYKG+ +P+ VK P + KIL N F + I++ ++H +
Sbjct: 45 VLGSGAFGTVYKGIWVPEGE--TVKIPVAI-KILNETTGPKANVEFMDEALIMASMDHPH 101
Query: 67 VVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASALD 122
+V++LGVCL + LV + +P+G L ++V SQ+L W C++I A +
Sbjct: 102 LVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW--CVQI----AKGMM 154
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL ++H D+ + N+L+ K+ DF + L+ ++ + W+
Sbjct: 155 YLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 211
Query: 183 E---YLFWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E Y +T +SDV+S+GV + EL+T G P Y + + E+ ++
Sbjct: 212 ECIHYRKFTHQSDVWSYGVTIWELMTFGGKP--YDGIPTREIPDLL 255
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 31/226 (13%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKIL-------INEVFQHKMRIISQINHKN 66
+LG G FG VYKG+ +P+ VK P + KIL N F + I++ ++H +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGE--TVKIPVAI-KILNETTGPKANVEFMDEALIMASMDHPH 78
Query: 67 VVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASALD 122
+V++LGVCL + LV + +P+G L ++V SQ+L W C++I A +
Sbjct: 79 LVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW--CVQI----AKGMM 131
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL ++H D+ + N+L+ K+ DF + L+ ++ + W+
Sbjct: 132 YLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 183 E---YLFWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E Y +T +SDV+S+GV + EL+T G P Y + + E+ ++
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMTFGGKP--YDGIPTREIPDLL 232
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 87 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 139
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 140 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 242
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 7 TKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++D LGEG +G V V VAVK M + E + ++ I +NH+
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH 125
NVVK G E + L E+ G LF + + R + + + YLH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 126 SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL 185
+G I H D+K N+LLD+ K++DF + + +++ K T+ ++ PE L
Sbjct: 121 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 186 ----FWTEKSDVYSFGVVLVELLTGKHP 209
F E DV+S G+VL +L G+ P
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 129
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 232
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 132
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 133 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 235
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 102 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 154
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 155 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 257
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 132
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 133 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 235
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 79 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 131
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 234
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 83 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 135
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 136 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 238
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 132
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 133 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 235
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 136
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 137 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 239
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG +G V V VAVK M + E + ++ I +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW--CVQI----AKG 129
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 232
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 129
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 232
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 16 LGEGGFGFVYKGVLPD------NTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY+G D T VAVK + F ++ ++ +VV+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRY-------QSSQVLKTWKTCLRIAAETASALD 122
+LGV + + L+V E + +G L ++R + T + +++AAE A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ ++T K+ DF + I D K + V W+ P
Sbjct: 142 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMV 224
E L +T SD++SFGVVL E +T + Y L++ ++ + V
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFV 242
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 38/292 (13%)
Query: 16 LGEGGFGFVYKGVLPD------NTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY+G D T VAVK + F ++ ++ +VV+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRY-------QSSQVLKTWKTCLRIAAETASALD 122
+LGV + + L+V E + +G L ++R + T + +++AAE A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ ++T K+ DF + I D K + V W+ P
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E L +T SD++SFGVVL E +T + Y L++ ++ + V ++ L Q
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFV------MDGGYLDQP 254
Query: 240 LNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N E V L C + + RPT ++ L LH +F
Sbjct: 255 DNCP----------ERVTDLMRMCWQFNPNMRPTFLEIVNLLKD--DLHPSF 294
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 71 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 123
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 124 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 226
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 16 LGEGGFGFVYKGVLPD------NTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY+G D T VAVK + F ++ ++ +VV+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRY-------QSSQVLKTWKTCLRIAAETASALD 122
+LGV + + L+V E + +G L ++R + T + +++AAE A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ ++T K+ DF + I D K + V W+ P
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMV 224
E L +T SD++SFGVVL E +T + Y L++ ++ + V
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFV 245
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +LG G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 74 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AEG 126
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 127 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 229
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 122
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T+ T+ +L P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTELCGTLDYLPP 175
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 20/205 (9%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+LG+G FG K + V V K + F +++++ + H NV+K +GV
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 75 LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIH 134
+ K + E++ GTL ++ SQ W + A + AS + YLHS+ IIH
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQY--PWSQRVSFAKDIASGMAYLHSMN---IIH 131
Query: 135 GDVKSANILLDDNYTAKVADFASSVLISSHD---------QTATTTKEIETVG---WLDP 182
D+ S N L+ +N VADF + L+ + K VG W+ P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 183 EYL---FWTEKSDVYSFGVVLVELL 204
E + + EK DV+SFG+VL E++
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 139
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 140 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 192
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 148
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y HS +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 149 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 201
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 118/233 (50%), Gaps = 35/233 (15%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKM---------VDKILINEVFQHKMRII 59
+ K +LG G FG VYKG+ +P+ V + M +K +++E + ++
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAY-----VM 105
Query: 60 SQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAA 115
+ +++ +V ++LG+CL + V L+ + +P G L +VR SQ L W C++IA
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQIA- 161
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
++YL ++H D+ + N+L+ K+ DF + L+ + ++
Sbjct: 162 ---KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 215
Query: 176 TVGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
+ W+ E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 216 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 266
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 122
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPP 175
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 125
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 178
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 127
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 180
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQINH 64
+++D LG+G FG VY + + K ++K + + ++ I S + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYL 124
N++++ G + L+ E+ P GT+++ + Q +T I E A+AL Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYIT-ELANALSYC 128
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HS +IH D+K N+LL N K+ADF SV H ++ T T+ +L PE
Sbjct: 129 HS---KRVIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 181
Query: 185 L---FWTEKSDVYSFGVVLVELLTGKHP 209
+ EK D++S GV+ E L G P
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 123
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPP 176
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 127
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPP 180
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 122
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPP 175
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 122
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 175
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 125
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 178
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 11/211 (5%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
V +++D LGEG G V V VAVK M + E + ++ I +
Sbjct: 2 VPFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH+NVVK G E + L E+ G LF + + R + + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YLH +G I H D+K N+LLD+ K++DF + + +++ K T+ ++ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 183 EYL----FWTEKSDVYSFGVVLVELLTGKHP 209
E L F E DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 36/283 (12%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVK--KPKMVDKILINEVFQHKMRIISQINHKNVV 68
++G G FG V G L VA+K K DK + F + I+ Q +H N++
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD--FLSEASIMGQFDHPNII 93
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ GV + K +++ E++ NG+L +R + T + + S + YL +
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF--TVIQLVGMLRGIGSGMKYLSDMS 151
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---Y 184
+ +H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 152 A---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 185 LFWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ 243
+T SDV+S+G+V+ E+++ G+ P Y +++ ++ + + E L ++
Sbjct: 209 RKFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQDVIKAIE------EGYRLPPPMDCP 260
Query: 244 VADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
+A + +L C + ++RP Q+ LD L R
Sbjct: 261 IA----------LHQLMLDCWQKERSDRPKFGQIVNMLDKLIR 293
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 122
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTXLCGTLDYLPP 175
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 121
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 122 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 174
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 43/291 (14%)
Query: 14 HLLGEGGFGFVYKGVLP--DNTLVAVKKPKMVDKILIN---EVFQHKMRIISQINHKNVV 68
+LG+G FG V + L D + V V + I+ + E F + + + +H +V
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 69 KILGVCLETK------VPLLVYEFVPNGTLFQHVRYQSSQVLKT-----WKTCLRIAAET 117
K++GV L ++ +P+++ F+ +G L H +S++ + +T +R +
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDL--HAFLLASRIGENPFNLPLQTLVRFMVDI 146
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
A ++YL S IH D+ + N +L ++ T VADF S I S D V
Sbjct: 147 ACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPV 203
Query: 178 GWLDPEYL---FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIEN 233
WL E L +T SDV++FGV + E++T G+ P Y + + E+ + Y I
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP--YAGIENAEI------YNYLIGG 255
Query: 234 NSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
N L+Q E +E V L +C +RP+ + +L+++
Sbjct: 256 NRLKQ----------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 126
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 127 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 179
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY ++ + K ++K + + ++ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G ++ L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 122
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV S + A T+ +L P
Sbjct: 123 YCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG----TLDYLPP 175
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 16 LGEGGFGFVYKGVLPD------NTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY+G D T VAVK + F ++ ++ +VV+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRY-------QSSQVLKTWKTCLRIAAETASALD 122
+LGV + + L+V E + +G L ++R + T + +++AAE A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ ++T K+ DF + I D K + V W+ P
Sbjct: 144 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMV 224
E L +T SD++SFGVVL E +T + Y L++ ++ + V
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFV 244
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 38/292 (13%)
Query: 16 LGEGGFGFVYKGVLPD------NTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY+G D T VAVK + F ++ ++ +VV+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRY-------QSSQVLKTWKTCLRIAAETASALD 122
+LGV + + L+V E + +G L ++R + T + +++AAE A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ ++T K+ DF + I D K + V W+ P
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E L +T SD++SFGVVL E +T + Y L++ ++ + V ++ L Q
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFV------MDGGYLDQP 254
Query: 240 LNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N E V L C + + RPT ++ L LH +F
Sbjct: 255 DNCP----------ERVTDLMRMCWQFNPKMRPTFLEIVNLLKD--DLHPSF 294
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P G +++ + Q +T I E A+AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYIT-ELANALS 127
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y HS +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 128 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 180
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + K ++K + + ++ I S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 119
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 120 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 172
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 41/290 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G ++T VAVK K + + F + ++ + H +V++ V
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK--PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 76 ETKVPLLVYEFVPNGTLFQHVRY-QSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIH 134
+ ++ E++ G+L ++ + +VL + +A+ A + Y+ IH
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---YIH 133
Query: 135 GDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKS 191
D+++AN+L+ ++ K+ADF + +I ++ TA + + W PE + +T KS
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGCFTIKS 192
Query: 192 DVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENN-----SLRQILNFQVA 245
DV+SFG++L E++T GK PYP N +L Q
Sbjct: 193 DVWSFGILLYEIVTYGK-------------------IPYPGRTNADVMTALSQGYRMPRV 233
Query: 246 DENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFWAQK 295
EN +E+ + K+ C + ERPT + LD E + Q+
Sbjct: 234 -ENCPDELYDIMKM---CWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQ 279
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 117/228 (51%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +L G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L++ + +P G L +VR SQ L W C++I A
Sbjct: 84 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 136
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 137 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 239
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 127
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T T+ +L P
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 180
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 41/290 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ G ++T VAVK K + + F + ++ + H +V++ V
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK--PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 76 ETKVPLLVYEFVPNGTLFQHVRY-QSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIH 134
+ + ++ EF+ G+L ++ + +VL + +A+ A + Y+ IH
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVL--LPKLIDFSAQIAEGMAYIERKN---YIH 132
Query: 135 GDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKS 191
D+++AN+L+ ++ K+ADF + +I ++ TA + + W PE + +T KS
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGCFTIKS 191
Query: 192 DVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENN-----SLRQILNFQVA 245
+V+SFG++L E++T GK PYP N +L Q
Sbjct: 192 NVWSFGILLYEIVTYGK-------------------IPYPGRTNADVMSALSQGYRMPRM 232
Query: 246 DENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFWAQK 295
EN +E+ + K+ C + ERPT + LD E + Q+
Sbjct: 233 -ENCPDELYDIMKM---CWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQ 278
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +L G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 129
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 232
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDN----TLVAVKKPKMVDKILINEVFQHKMRIISQINH 64
+ K +L G FG VYKG+ +P+ VA+K+ + N+ + +++ +++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAETASA 120
+V ++LG+CL + V L+ + +P G L +VR SQ L W C++I A
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 136
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
++YL ++H D+ + N+L+ K+ DF + L+ + ++ + W+
Sbjct: 137 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 181 DPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
E + +T +SDV+S+GV + EL+T G P Y + ++E++ ++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKP--YDGIPASEISSIL 239
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 125
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV S + A T+ +L P
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG----TLDYLPP 178
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 131/283 (46%), Gaps = 36/283 (12%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVK--KPKMVDKILINEVFQHKMRIISQINHKNVV 68
++G G FG V G L VA+K K DK + F + I+ Q +H N++
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD--FLSEASIMGQFDHPNII 78
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ GV + K +++ E++ NG+L +R + T + + S + YL +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF--TVIQLVGMLRGIGSGMKYLSDMS 136
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---Y 184
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 137 ---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 185 LFWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ 243
+T SDV+S+G+V+ E+++ G+ P Y +++ ++ + + E L ++
Sbjct: 194 RKFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQDVIKAIE------EGYRLPPPMDCP 245
Query: 244 VADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
+A + +L C + ++RP Q+ LD L R
Sbjct: 246 IA----------LHQLMLDCWQKERSDRPKFGQIVNMLDKLIR 278
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 15 LLGEGGFGFVY---KGVLPDNTLVAVKKPKMVDKILINEVFQHKMR--IISQINHKNVVK 69
+LG+G FG V+ K PD+ + K + + + + KM I++ +NH VVK
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 70 ILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
L +T+ L L+ +F+ G LF + S +V+ T + AE A LD+LHSLG
Sbjct: 95 -LHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALGLDHLHSLG 150
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL--- 185
II+ D+K NILLD+ K+ DF S H++ A + TV ++ PE +
Sbjct: 151 ---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF--CGTVEYMAPEVVNRQ 205
Query: 186 FWTEKSDVYSFGVVLVELLTGKHP 209
+ +D +S+GV++ E+LTG P
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 20/205 (9%)
Query: 15 LLGEGGFG--FVYKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMR--IISQINHKNVV 68
+LG+G FG F+ K + + L A+K K + + + + KM I+ ++NH +V
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA-TLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 69 KILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
K L +T+ L L+ +F+ G LF + S +V+ T + AE A ALD+LHSL
Sbjct: 90 K-LHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
G II+ D+K NILLD+ K+ DF S H++ A + TV ++ PE +
Sbjct: 146 G---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF--CGTVEYMAPEVVNR 200
Query: 186 -FWTEKSDVYSFGVVLVELLTGKHP 209
T+ +D +SFGV++ E+LTG P
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 148
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y HS +IH D+K N+LL K+ADF SV H ++ T+ +L P
Sbjct: 149 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLPP 201
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 124
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T+ +L P
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPP 177
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 122
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV S + A T+ +L P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG----TLDYLPP 175
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 131/283 (46%), Gaps = 36/283 (12%)
Query: 15 LLGEGGFGFVYKGVLP----DNTLVAVK--KPKMVDKILINEVFQHKMRIISQINHKNVV 68
++G G FG V G L VA+K K DK + F + I+ Q +H N++
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD--FLSEASIMGQFDHPNII 72
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ GV + K +++ E++ NG+L +R + T + + S + YL +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF--TVIQLVGMLRGIGSGMKYLSDMS 130
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---Y 184
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE Y
Sbjct: 131 ---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 185 LFWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQ 243
+T SDV+S+G+V+ E+++ G+ P Y +++ ++ + + E L ++
Sbjct: 188 RKFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQDVIKAIE------EGYRLPPPMDCP 239
Query: 244 VADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
+A + +L C + ++RP Q+ LD L R
Sbjct: 240 IA----------LHQLMLDCWQKERSDRPKFGQIVNMLDKLIR 272
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 52/298 (17%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQIN-HKNVV 68
LG G FG V + G+ ++ + VAVK K E +++I+S + H+N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKT-------WKTCLRIAAETASAL 121
+LG C L++ E+ G L +R ++ L + L +++ A +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLD 181
+L S IH DV + N+LL + + AK+ DF + I + V W+
Sbjct: 174 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 182 PEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP--IENNSL 236
PE +F +T +SDV+S+G++L E+ + L N PYP + N+
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN---------PYPGILVNSKF 272
Query: 237 RQILNFQVADENEMEEIEIVAK----LASKCLRTSGTERPTMRQVS----EQLDSLRR 286
++ V D +M + K + C T RPT +Q+ EQ RR
Sbjct: 273 YKL----VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 326
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 124
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+A+F SV H ++ T T+ +L P
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLPP 177
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 20/205 (9%)
Query: 15 LLGEGGFG--FVYKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMR--IISQINHKNVV 68
+LG+G FG F+ K + + L A+K K + + + + KM I+ ++NH +V
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKAT-LKVRDRVRTKMERDILVEVNHPFIV 89
Query: 69 KILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
K L +T+ L L+ +F+ G LF + S +V+ T + AE A ALD+LHSL
Sbjct: 90 K-LHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
G II+ D+K NILLD+ K+ DF S H++ A + TV ++ PE +
Sbjct: 146 G---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF--CGTVEYMAPEVVNR 200
Query: 186 -FWTEKSDVYSFGVVLVELLTGKHP 209
T+ +D +SFGV++ E+LTG P
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 40/279 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V G VAVK K + + + F + + + +++H +VK GVC
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK--EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 76 ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHG 135
+ +V E++ NG L ++R + + L + + + +L S IH
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPS--QLLEMCYDVCEGMAFLE---SHQFIHR 128
Query: 136 DVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSD 192
D+ + N L+D + KV+DF + + DQ ++ V W PE Y ++ KSD
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 193 VYSFGVVLVELLT-GKHP-----RSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVAD 246
V++FG+++ E+ + GK P S V L ++ R+ Y P+ + ++++ QI+
Sbjct: 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRL--YRPH-LASDTIYQIMY----- 239
Query: 247 ENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLR 285
C +RPT +Q+ ++ LR
Sbjct: 240 ---------------SCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 20/205 (9%)
Query: 15 LLGEGGFG--FVYKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMR--IISQINHKNVV 68
+LG+G FG F+ K + + L A+K K + + + + KM I+ ++NH +V
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKAT-LKVRDRVRTKMERDILVEVNHPFIV 90
Query: 69 KILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
K L +T+ L L+ +F+ G LF + S +V+ T + AE A ALD+LHSL
Sbjct: 91 K-LHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHLHSL 146
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
G II+ D+K NILLD+ K+ DF S H++ A + TV ++ PE +
Sbjct: 147 G---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF--CGTVEYMAPEVVNR 201
Query: 186 -FWTEKSDVYSFGVVLVELLTGKHP 209
T+ +D +SFGV++ E+LTG P
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 127/290 (43%), Gaps = 30/290 (10%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPD-NTLVAVKK-PKMVDKILINEVFQHKMRIISQINHK 65
+ Y+K +GEG +G V+K D +VA+KK + D +I ++ ++R++ Q+ H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH 125
N+V +L V + LV+E+ + L + RYQ K+ I +T A+++ H
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKS---ITWQTLQAVNFCH 119
Query: 126 SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL 185
IH DVK NIL+ + K+ DF + L++ + E+ T + PE L
Sbjct: 120 KHNC---IHRDVKPENILITKHSVIKLCDFGFARLLTG--PSDYYDDEVATRWYRSPELL 174
Query: 186 F----WTEKSDVYSFGVVLVELLT------GKHPRSYVALASNEMTRMVPYFPYPIENNS 235
+ DV++ G V ELL+ GK + L + ++P N
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN- 233
Query: 236 LRQILNFQVADENEMEEIEI--------VAKLASKCLRTSGTERPTMRQV 277
+ ++ D +ME +E+ L CL TER T Q+
Sbjct: 234 -QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQL 282
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 125
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+A+F SV H ++ T T+ +L P
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLPP 178
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQINH 64
+++D LG+G FG VY + + K ++K + + ++ I S + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYL 124
N++++ G + L+ E+ P GT+++ + Q +T I E A+AL Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYIT-ELANALSYC 128
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HS +IH D+K N+LL N K+ADF SV H ++ T+ +L PE
Sbjct: 129 HS---KRVIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRDTLCGTLDYLPPEM 181
Query: 185 L---FWTEKSDVYSFGVVLVELLTGKHP 209
+ EK D++S GV+ E L G P
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 38/292 (13%)
Query: 16 LGEGGFGFVYKGVLPD------NTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY+G D T VAVK + F ++ ++ +VV+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRY-------QSSQVLKTWKTCLRIAAETASALD 122
+LGV + + L+V E + +G L ++R + T + +++AAE A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H ++ + N ++ ++T K+ DF + I D K + V W+ P
Sbjct: 145 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E L +T SD++SFGVVL E +T + Y L++ ++ + V ++ L Q
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFV------MDGGYLDQP 254
Query: 240 LNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N E V L C + + RPT ++ L LH +F
Sbjct: 255 DNCP----------ERVTDLMRMCWQFNPNMRPTFLEIVNLLKD--DLHPSF 294
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 37/232 (15%)
Query: 12 KRHLLGEGGFGFVYKGV-LPDN----TLVAVK------KPKMVDKILINEVFQHKMRIIS 60
K +LG G FG VYKG+ +PD VA+K PK +K +++E + +++
Sbjct: 21 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK-ANKEILDEAY-----VMA 74
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQ----SSQVLKTWKTCLRIAAE 116
+ V ++LG+CL + V L V + +P G L HVR SQ L W C++IA
Sbjct: 75 GVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNW--CMQIA-- 129
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
+ YL + ++H D+ + N+L+ K+ DF + L+ +
Sbjct: 130 --KGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP 184
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
+ W+ E + +T +SDV+S+GV + EL+T G P Y + + E+ ++
Sbjct: 185 IKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKP--YDGIPAREIPDLL 234
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 38/292 (13%)
Query: 16 LGEGGFGFVYKGVLPD------NTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY+G D T VAVK + F ++ ++ +VV+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRY-------QSSQVLKTWKTCLRIAAETASALD 122
+LGV + + L+V E + +G L ++R + T + +++AAE A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H ++ + N ++ ++T K+ DF + I D K + V W+ P
Sbjct: 146 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E L +T SD++SFGVVL E +T + Y L++ ++ + V ++ L Q
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFV------MDGGYLDQP 255
Query: 240 LNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N E V L C + + RPT ++ L LH +F
Sbjct: 256 DNCP----------ERVTDLMRMCWQFNPNMRPTFLEIVNLLKD--DLHPSF 295
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 125
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T+ +L P
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPP 178
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 123
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF S S +T + T+ +L P
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSG----TLDYLPP 176
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 123/277 (44%), Gaps = 41/277 (14%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPDN---TLVAVKKPKMVDKILINEVFQHKMRIISQINHKN 66
+ K +G+G FG V+KG+ DN +VA+K + + E Q ++ ++SQ +
Sbjct: 25 FTKLERIGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 67 VVKILGVCLETKVPLLVYEFVPNGTLFQHVR---YQSSQVLKTWKTCLRIAAETASALDY 123
V K G L+ ++ E++ G+ +R + Q+ K L+ LDY
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILK-------GLDY 135
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
LHS IH D+K+AN+LL + K+ADF + ++ D + T W+ PE
Sbjct: 136 LHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPE 190
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQIL 240
+ + K+D++S G+ +EL G+ P S +M M F P +NN +
Sbjct: 191 VIQQSAYDSKADIWSLGITAIELAKGEPPNS-------DMHPMRVLFLIP-KNNPPTLVG 242
Query: 241 NFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQV 277
+F + + CL + RPT +++
Sbjct: 243 DFTKS----------FKEFIDACLNKDPSFRPTAKEL 269
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 122
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T+ +L P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPP 175
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 123
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T+ +L P
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDTLCGTLDYLPP 176
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPD-NTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNV 67
+D LGEG +G VYK + + +VA+K+ P D + E+ + ++ I+ Q + +V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD---LQEIIK-EISIMQQCDSPHV 86
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
VK G + +V E+ G++ +R ++ + T I T L+YLH +
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTL--TEDEIATILQSTLKGLEYLHFM 144
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY--- 184
IH D+K+ NILL+ AK+ADF + ++ D A I T W+ PE
Sbjct: 145 RK---IHRDIKAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVIQE 199
Query: 185 LFWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP 230
+ + +D++S G+ +E+ GK P Y + M+P P P
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKPP--YADIHPMRAIFMIPTNPPP 243
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 52/301 (17%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQIN-HKNVV 68
LG G FG V + G+ ++ + VAVK K E +++I+S + H+N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHS-- 126
+LG C L++ E+ G L +R + L+ E S+ D LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 127 --------LGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVG 178
L S IH DV + N+LL + + AK+ DF + I + V
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 233
Query: 179 WLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP--IEN 233
W+ PE +F +T +SDV+S+G++L E+ + L N PYP + N
Sbjct: 234 WMAPESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN---------PYPGILVN 275
Query: 234 NSLRQILNFQVADENEMEEIEIVAK----LASKCLRTSGTERPTMRQVS----EQLDSLR 285
+ ++ V D +M + K + C T RPT +Q+ EQ R
Sbjct: 276 SKFYKL----VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 331
Query: 286 R 286
R
Sbjct: 332 R 332
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 48/289 (16%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQIN-HKNVV 68
LG G FG V + G+ ++ + VAVK K E +++I+S + H+N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKT-------WKTCLRIAAETASAL 121
+LG C L++ E+ G L +R ++ L + L +++ A +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLD 181
+L S IH DV + N+LL + + AK+ DF + I + V W+
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 182 PEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYP--IENNSL 236
PE +F +T +SDV+S+G++L E+ + L N PYP + N+
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN---------PYPGILVNSKF 264
Query: 237 RQILNFQVADENEMEEIEIVAK----LASKCLRTSGTERPTMRQVSEQL 281
++ V D +M + K + C T RPT +Q+ L
Sbjct: 265 YKL----VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 309
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P GT+++ + Q +T I E A+AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYI-TELANALS 125
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H S +IH D+K N+LL K+ADF SV H ++ T+ +L P
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLPP 178
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 35/225 (15%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLP-DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+++ LG GGFG V++ D+ A+K+ ++ ++ L E +++ ++++ H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTW------------KTCLRIAA 115
V+ LE + P L+ ++ + LK W CL I
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQT-------- 167
+ A A+++LHS G ++H D+K +NI + KV DF L+++ DQ
Sbjct: 126 QIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFG---LVTAMDQDEEEQTVLT 179
Query: 168 -----ATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELL 204
A T ++ T ++ PE + ++ K D++S G++L ELL
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQI 62
A ++++ LG+G FG VY + + K ++K + + ++ I S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ G + L+ E+ P G +++ + Q +T I E A+AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYIT-ELANALS 127
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y HS +IH D+K N+LL K+ADF SV H ++ T+ +L P
Sbjct: 128 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLXGTLDYLPP 180
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHP 209
E + EK D++S GV+ E L GK P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 38/292 (13%)
Query: 16 LGEGGFGFVYKGVLPD------NTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VY+G D T VAVK + F ++ ++ +VV+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRY-------QSSQVLKTWKTCLRIAAETASALD 122
+LGV + + L+V E + +G L ++R + T + +++AAE A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
YL++ +H D+ + N ++ ++T K+ DF + I K + V W+ P
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 183 EYL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E L +T SD++SFGVVL E +T + Y L++ ++ + V ++ L Q
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFV------MDGGYLDQP 254
Query: 240 LNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENF 291
N E V L C + + RPT ++ L LH +F
Sbjct: 255 DNCP----------ERVTDLMRMCWQFNPKMRPTFLEIVNLLKD--DLHPSF 294
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 14 HLLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
++G G FG V G L VA+K K+ F + I+ Q +H N++
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ GV ++K ++V E++ NG+L ++ Q T + + ++ + YL +G
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQF--TVIQLVGMLRGISAGMKYLSDMG- 144
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET-VGWLDPE---YL 185
+H D+ + NIL++ N KV+DF S ++ + A TT+ + + W PE +
Sbjct: 145 --YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 186 FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQV 244
+T SDV+S+G+V+ E+++ G+ P Y + + ++ + V E L ++
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYGERP--YWEMTNQDVIKAVE------EGYRLPSPMDCPA 254
Query: 245 ADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRR 286
A + +L C + RP ++ LD L R
Sbjct: 255 A----------LYQLMLDCWQKERNSRPKFDEIVNMLDKLIR 286
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 16 LGEGGFGFVYKGVL----PDNTLVAVKKPKMVDKI--LINEVFQHKMRIISQINHKNVVK 69
LGE FG VYKG L P AV + DK + E F+H+ + +++ H NVV
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQ-------HVRYQSSQVLKTWKTCL------RIAAE 116
+LGV + + +++ + +G L + H S+ +T K+ L + A+
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
A+ ++Y L S ++H D+ + N+L+ D K++D + + D +
Sbjct: 154 IAAGMEY---LSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 177 VGWLDPEYLFWTE---KSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
+ W+ PE + + + SD++S+GVVL E+ + G P Y ++ ++ M+
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP--YCGYSNQDVVEMI 260
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPDN---TLVAVKKPKMVDKILINEVFQHKMRIISQINHKN 66
+ K +G+G FG V+KG+ DN +VA+K + + E Q ++ ++SQ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 67 VVKILGVCLETKVPLLVYEFVPNGT---LFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
V K G L+ ++ E++ G+ L + +Q+ T LR E LDY
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI----ATILR---EILKGLDY 134
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
LHS IH D+K+AN+LL ++ K+ADF + ++ D + T W+ PE
Sbjct: 135 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPE 189
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHPRS 211
+ + K+D++S G+ +EL G+ P S
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEPPHS 220
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 132/300 (44%), Gaps = 43/300 (14%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT LVAVK+ + + FQ +++I+
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-FQREIQIL 62
Query: 60 SQINHKNVVKILGVCLETKVP--LLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ +VK GV P LV E++P+G L ++ +++ + L +++
Sbjct: 63 KALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDAS--RLLLYSSQI 120
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLIS-SHDQTATTTKEIET 176
++YL GS +H D+ + NIL++ K+ADF + L+ D
Sbjct: 121 CKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP 177
Query: 177 VGWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHPRSYV---ALASNEMTRM------V 224
+ W PE L ++ +SDV+SFGVVL EL T Y S E RM V
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT------YCDKSCSPSAEFLRMMGCERDV 231
Query: 225 PYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
P +E Q L A E+ E L C S +RP+ + QLD L
Sbjct: 232 PALCRLLELLEEGQRLPAPPACPAEVHE------LMKLCWAPSPQDRPSFSALGPQLDML 285
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPDN---TLVAVKKPKMVDKILINEVFQHKMRIISQINHKN 66
+ K +G+G FG V+KG+ DN +VA+K + + E Q ++ ++SQ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 67 VVKILGVCLETKVPLLVYEFVPNGT---LFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
V K G L+ ++ E++ G+ L + +Q+ T LR E LDY
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI----ATILR---EILKGLDY 119
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
LHS IH D+K+AN+LL ++ K+ADF + ++ D + T W+ PE
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPE 174
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHPRS 211
+ + K+D++S G+ +EL G+ P S
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHS 205
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 16 LGEGGFGFVYKGVL----PDNTLVAVKKPKMVDKI--LINEVFQHKMRIISQINHKNVVK 69
LGE FG VYKG L P AV + DK + E F+H+ + +++ H NVV
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQ-------HVRYQSSQVLKTWKTCL------RIAAE 116
+LGV + + +++ + +G L + H S+ +T K+ L + A+
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
A+ ++Y L S ++H D+ + N+L+ D K++D + + D +
Sbjct: 137 IAAGMEY---LSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 177 VGWLDPEYLFWTE---KSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
+ W+ PE + + + SD++S+GVVL E+ + G P Y ++ ++ M+
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP--YCGYSNQDVVEMI 243
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPDN---TLVAVKKPKMVDKILINEVFQHKMRIISQINHKN 66
+ K +G+G FG V+KG+ DN +VA+K + + E Q ++ ++SQ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 67 VVKILGVCLETKVPLLVYEFVPNGT---LFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
V K G L+ ++ E++ G+ L + +Q+ T LR E LDY
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI----ATILR---EILKGLDY 119
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
LHS IH D+K+AN+LL ++ K+ADF + ++ D + T W+ PE
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPE 174
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHPRS 211
+ + K+D++S G+ +EL G+ P S
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHS 205
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPDN---TLVAVKKPKMVDKILINEVFQHKMRIISQINHKN 66
+ K +G+G FG V+KG+ DN +VA+K + + E Q ++ ++SQ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 67 VVKILGVCLETKVPLLVYEFVPNGT---LFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
V K G L+ ++ E++ G+ L + +Q+ T LR E LDY
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI----ATILR---EILKGLDY 139
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
LHS IH D+K+AN+LL ++ K+ADF + ++ D + T W+ PE
Sbjct: 140 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPE 194
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHPRS 211
+ + K+D++S G+ +EL G+ P S
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPPHS 225
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 26/224 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVK--------KPKMVDKILINEVFQHKMRIISQINHKNV 67
LG GG VY L ++T++ +K P+ ++ L + F+ ++ SQ++H+N+
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETL--KRFEREVHNSSQLSHQNI 73
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
V ++ V E LV E++ TL +++ S + T + + + + H +
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYIE---SHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
I+H D+K NIL+D N T K+ DF + +S T T + TV + PE
Sbjct: 131 ---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKG 186
Query: 186 -FWTEKSDVYSFGVVLVELLTGKHP---RSYVALASNEMTRMVP 225
E +D+YS G+VL E+L G+ P + V++A + VP
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVP 230
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS++NH+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 255
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 256 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 14 HLLGEGGFGFVYKGVLPDNTL----VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+LGEG FG VY+GV ++ VAVK K + E F + I+ ++H ++VK
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
++G+ +E + ++ E P G L H ++ LK T + + + A+ YL S+
Sbjct: 74 LIGI-IEEEPTWIIMELYPYGEL-GHYLERNKNSLKV-LTLVLYSLQICKAMAYLESINC 130
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ NIL+ K+ DF S I D + + + W+ PE +
Sbjct: 131 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRR 186
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP 209
+T SDV+ F V + E+L+ GK P
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQP 210
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 49/311 (15%)
Query: 9 NYDKRHLLGEGGFGFVYKG-VLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+Y+ + ++G G V P VA+K+ + + +++ +SQ +H N+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRY------QSSQVLKTWKTCLRIAAETASAL 121
V + LV + + G++ +++ S VL T I E L
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE-STIATILREVLEGL 134
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKE--IETVG 178
+YLH G IH DVK+ NILL ++ + ++ADF S+ L + D T ++ + T
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 179 WLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENN 234
W+ PE + + K+D++SFG+ +EL TG PY YP
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATG----------------AAPYHKYPPMKV 235
Query: 235 SLRQILNFQVADENEMEEIEIVA-------KLASKCLRTSGTERPTMRQVSEQLDSLRRL 287
+ + N + E +++ E++ K+ S CL+ +RPT ++ LR
Sbjct: 236 LMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL------LR-- 287
Query: 288 HENFWAQKNSE 298
H+ F KN E
Sbjct: 288 HKFFQKAKNKE 298
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 14 HLLGEGGFGFVYKGVLPDNTL----VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+LGEG FG VY+GV ++ VAVK K + E F + I+ ++H ++VK
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
++G+ +E + ++ E P G L H ++ LK T + + + A+ YL S+
Sbjct: 90 LIGI-IEEEPTWIIMELYPYGEL-GHYLERNKNSLKV-LTLVLYSLQICKAMAYLESINC 146
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ NIL+ K+ DF S I D + + + W+ PE +
Sbjct: 147 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRR 202
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP 209
+T SDV+ F V + E+L+ GK P
Sbjct: 203 FTTASDVWMFAVCMWEILSFGKQP 226
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS+ NH+N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 281
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 282 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 14 HLLGEGGFGFVYKGVLPDNTL----VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+LGEG FG VY+GV ++ VAVK K + E F + I+ ++H ++VK
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
++G+ +E + ++ E P G L H ++ LK T + + + A+ YL S+
Sbjct: 78 LIGI-IEEEPTWIIMELYPYGEL-GHYLERNKNSLKV-LTLVLYSLQICKAMAYLESINC 134
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ NIL+ K+ DF S I D + + + W+ PE +
Sbjct: 135 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRR 190
Query: 187 WTEKSDVYSFGVVLVELLT-GKHP 209
+T SDV+ F V + E+L+ GK P
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS++NH+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 269
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 270 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 19/209 (9%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPDN---TLVAVKKPKMVDKILINEVFQHKMRIISQINHKN 66
+ K +G+G FG VYKG+ DN +VA+K + + E Q ++ ++SQ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGI--DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 67 VVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTW-KTCLRIAAETASALDYLH 125
+ + G L++ ++ E++ G+ ++ + +T+ T LR E LDYLH
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLK--PGPLEETYIATILR---EILKGLDYLH 133
Query: 126 SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL 185
S IH D+K+AN+LL + K+ADF + ++ D + T W+ PE +
Sbjct: 134 SERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVI 188
Query: 186 ---FWTEKSDVYSFGVVLVELLTGKHPRS 211
+ K+D++S G+ +EL G+ P S
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPPNS 217
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS+ NH+N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 271
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 272 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS+ NH+N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 261
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 262 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS+ NH+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 254
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 255 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS+ NH+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 254
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 255 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS+ NH+N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 295
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 296 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS+ NH+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 255
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 256 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS+ NH+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 269
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 270 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS+ NH+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 255
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 256 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS+ NH+N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 272
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 273 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS+ NH+N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 246
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 247 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 14 HLLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
++G G FG V +G L + VA+K K F + I+ Q H N+++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ GV + +++ EF+ NG L +R Q T + + AS + YL +
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF--TVIQLVGMLRGIASGMRYLAEMS- 138
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE---TVGWLDPE--- 183
+H D+ + NIL++ N KV+DF S + + T T + + W PE
Sbjct: 139 --YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 184 YLFWTEKSDVYSFGVVLVELLT-GKHP 209
+ +T SD +S+G+V+ E+++ G+ P
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG G FG VY+G + P VAVK V F + IIS+ NH+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 70 ILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLK-TWKTCLRIAAETASALDYLH 125
+GV L++ ++ E + G L + R + SQ L +A + A YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
IH D+ + N LL AK+ DF + I + V W+ P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQI 239
E +T K+D +SFGV+L E+ + + Y PYP ++N +++
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS------------------LGYMPYPSKSN--QEV 269
Query: 240 LNFQVADENEMEEIE----IVAKLASKCLRTSGTERPTMRQVSEQLD 282
L F V M+ + V ++ ++C + +RP + E+++
Sbjct: 270 LEF-VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 128/311 (41%), Gaps = 65/311 (20%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQIN-HKNVV 68
LG G FG V + G+ ++ + VAVK K E +++I+S + H+N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKT--------------------WK 108
+LG C L++ E+ G L +R ++ +L +
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 109 TCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTA 168
L +++ A + +L S IH DV + N+LL + + AK+ DF + I +
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 169 TTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVP 225
V W+ PE +F +T +SDV+S+G++L E+ + L N
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------LGLN------- 259
Query: 226 YFPYP--IENNSLRQILNFQVADENEMEEIEIVAK----LASKCLRTSGTERPTMRQVS- 278
PYP + N+ ++ V D +M + K + C T RPT +Q+
Sbjct: 260 --PYPGILVNSKFYKL----VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 313
Query: 279 ---EQLDSLRR 286
EQ RR
Sbjct: 314 FLQEQAQEDRR 324
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 14 HLLGEGGFGFVYKGVLP----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
++G G FG V +G L + VA+K K F + I+ Q H N+++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ GV + +++ EF+ NG L +R Q T + + AS + YL +
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF--TVIQLVGMLRGIASGMRYLAEMS- 136
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE---TVGWLDPE--- 183
+H D+ + NIL++ N KV+DF S + + T T + + W PE
Sbjct: 137 --YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 184 YLFWTEKSDVYSFGVVLVELLT-GKHP 209
+ +T SD +S+G+V+ E+++ G+ P
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 7 TKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVK--KPKMVDKILINEVFQHKMRIISQIN 63
+ Y+ +LG GG V+ L D+ VAVK + + F+ + + + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 64 HKNVVKILGVC-LETK---VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETAS 119
H +V + ET +P +V E+V TL V + T K + + A+
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQ 127
Query: 120 ALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVG 178
AL++ H G IIH DVK ANIL+ KV DF + + S + T I T
Sbjct: 128 ALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 179 WLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
+L PE +SDVYS G VL E+LTG+ P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 7 TKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVK--KPKMVDKILINEVFQHKMRIISQIN 63
+ Y+ +LG GG V+ L D+ VAVK + + F+ + + + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 64 HKNVVKILGVC-LETK---VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETAS 119
H +V + ET +P +V E+V TL V + T K + + A+
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQ 127
Query: 120 ALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKE-IETVG 178
AL++ H G IIH DVK ANI++ KV DF + I+ + T T I T
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 179 WLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
+L PE +SDVYS G VL E+LTG+ P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 128/292 (43%), Gaps = 45/292 (15%)
Query: 9 NYDKRHLLGEGGFGFVYKG-VLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+Y+ + ++G G V P VA+K+ + + +++ +SQ +H N+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRY------QSSQVL--KTWKTCLRIAAETAS 119
V + LV + + G++ +++ S VL T T LR E
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR---EVLE 127
Query: 120 ALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKE--IET 176
L+YLH G IH DVK+ NILL ++ + ++ADF S+ L + D T ++ + T
Sbjct: 128 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 177 VGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIE 232
W+ PE + + K+D++SFG+ +EL TG PY YP
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG----------------AAPYHKYPPM 228
Query: 233 NNSLRQILNFQVADENEMEEIEIVA-------KLASKCLRTSGTERPTMRQV 277
+ + N + E +++ E++ K+ S CL+ +RPT ++
Sbjct: 229 KVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 280
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 48/277 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVCL 75
LG G FG V+ +T VAVK M + E F + ++ + H +VK+ V
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKT--MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV- 246
Query: 76 ETKVPL-LVYEFVPNGTLFQHVRYQ--SSQVLKTWKTCLRIAAETASALDYLHSLGSPPI 132
TK P+ ++ EF+ G+L ++ S Q L + +A+ A + ++
Sbjct: 247 -TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK---LIDFSAQIAEGMAFIEQRN---Y 299
Query: 133 IHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLFWTE 189
IH D+++ANIL+ + K+ADF + + + + W PE + +T
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKF-----------PIKWTAPEAINFGSFTI 348
Query: 190 KSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPY-FPYPIENNSLRQILNFQVADE 247
KSDV+SFG++L+E++T G+ P Y +++ E+ R + + P N ++ N +
Sbjct: 349 KSDVWSFGILLMEIVTYGRIP--YPGMSNPEVIRALERGYRMPRPENCPEELYNIMM--- 403
Query: 248 NEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+C + ERPT + LD
Sbjct: 404 --------------RCWKNRPEERPTFEYIQSVLDDF 426
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 7 TKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVK--KPKMVDKILINEVFQHKMRIISQIN 63
+ Y+ +LG GG V+ L D+ VAVK + + F+ + + + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 64 HKNVVKILGVC-LETK---VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETAS 119
H +V + ET +P +V E+V TL V + T K + + A+
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQ 127
Query: 120 ALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKE-IETVG 178
AL++ H G IIH DVK ANI++ KV DF + I+ + T T I T
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 179 WLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
+L PE +SDVYS G VL E+LTG+ P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 14 HLLGEGGFGFVYKGVL--PDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+GEG FG V++G+ P+N VA+K K + E F + + Q +H ++VK
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 70 ILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
++GV E V ++ E G L F VR S + + + A + ++AL YL
Sbjct: 78 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL----ASLILYAYQLSTALAYLE-- 130
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---Y 184
S +H D+ + N+L+ N K+ DF S + + ++ + W+ PE +
Sbjct: 131 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 188
Query: 185 LFWTEKSDVYSFGVVLVELL 204
+T SDV+ FGV + E+L
Sbjct: 189 RRFTSASDVWMFGVCMWEIL 208
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 14 HLLGEGGFGFVYKG--VLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
++G G FG V G LP VA+K K F + I+ Q +H NV+
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ GV ++ +++ EF+ NG+L +R Q T + + A+ + YL +
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF--TVIQLVGMLRGIAAGMKYLADMN- 155
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE---TVGWLDPE--- 183
+H D+ + NIL++ N KV+DF S + T T + + W PE
Sbjct: 156 --YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 184 YLFWTEKSDVYSFGVVLVELLT-GKHP 209
Y +T SDV+S+G+V+ E+++ G+ P
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 14 HLLGEGGFGFVYKGVL--PDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+GEG FG V++G+ P+N VA+K K + E F + + Q +H ++VK
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 70 ILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
++GV E V ++ E G L F VR S + + + A + ++AL YL
Sbjct: 76 LIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDL----ASLILYAYQLSTALAYLE-- 128
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---Y 184
S +H D+ + N+L+ N K+ DF S + + ++ + W+ PE +
Sbjct: 129 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL-PIKWMAPESINF 186
Query: 185 LFWTEKSDVYSFGVVLVELL 204
+T SDV+ FGV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 14 HLLGEGGFGFVYKGVL--PDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+GEG FG V++G+ P+N VA+K K + E F + + Q +H ++VK
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 70 ILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
++GV E V ++ E G L F VR S + + + A + ++AL YL
Sbjct: 79 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL----ASLILYAYQLSTALAYLE-- 131
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---Y 184
S +H D+ + N+L+ N K+ DF S + + ++ + W+ PE +
Sbjct: 132 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 189
Query: 185 LFWTEKSDVYSFGVVLVELL 204
+T SDV+ FGV + E+L
Sbjct: 190 RRFTSASDVWMFGVCMWEIL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 14 HLLGEGGFGFVYKGVL--PDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+GEG FG V++G+ P+N VA+K K + E F + + Q +H ++VK
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 70 ILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
++GV E V ++ E G L F VR S + + + A + ++AL YL
Sbjct: 73 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL----ASLILYAYQLSTALAYLE-- 125
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---Y 184
S +H D+ + N+L+ N K+ DF S + + ++ + W+ PE +
Sbjct: 126 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 183
Query: 185 LFWTEKSDVYSFGVVLVELL 204
+T SDV+ FGV + E+L
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 14 HLLGEGGFGFVYKGVL--PDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+GEG FG V++G+ P+N VA+K K + E F + + Q +H ++VK
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 70 ILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
++GV E V ++ E G L F VR S + + + A + ++AL YL
Sbjct: 81 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL----ASLILYAYQLSTALAYLE-- 133
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---Y 184
S +H D+ + N+L+ N K+ DF S + + ++ + W+ PE +
Sbjct: 134 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 191
Query: 185 LFWTEKSDVYSFGVVLVELL 204
+T SDV+ FGV + E+L
Sbjct: 192 RRFTSASDVWMFGVCMWEIL 211
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 118
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 176 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 117
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 175 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR----KIGSFDETCTRFYTAE 140
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 198 AQYVSPELL--TEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 14 HLLGEGGFGFVYKGVL--PDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+GEG FG V++G+ P+N VA+K K + E F + + Q +H ++VK
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 70 ILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
++GV E V ++ E G L F VR S + + + A + ++AL YL
Sbjct: 76 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL----ASLILYAYQLSTALAYLE-- 128
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---Y 184
S +H D+ + N+L+ N K+ DF S + + ++ + W+ PE +
Sbjct: 129 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 186
Query: 185 LFWTEKSDVYSFGVVLVELL 204
+T SDV+ FGV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 14 HLLGEGGFGFVYKGVL--PDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+GEG FG V++G+ P+N VA+K K + E F + + Q +H ++VK
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 70 ILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
++GV E V ++ E G L F VR S + + + A + ++AL YL
Sbjct: 104 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL----ASLILYAYQLSTALAYLE-- 156
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---Y 184
S +H D+ + N+L+ N K+ DF S + + ++ + W+ PE +
Sbjct: 157 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 214
Query: 185 LFWTEKSDVYSFGVVLVELL 204
+T SDV+ FGV + E+L
Sbjct: 215 RRFTSASDVWMFGVCMWEIL 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 18/198 (9%)
Query: 16 LGEGGFGFVYKGVL--PDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKIL 71
+GEG FG V++G+ P+N VA+K K + E F + + Q +H ++VK++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 72 GVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
GV E V ++ E G L F VR S + + + A + ++AL YL S
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDL----ASLILYAYQLSTALAYLE---S 129
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+L+ N K+ DF S + + ++ + W+ PE +
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRR 188
Query: 187 WTEKSDVYSFGVVLVELL 204
+T SDV+ FGV + E+L
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 116
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 174 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 46/225 (20%)
Query: 5 KATKNYDKRHLLGEGGFGFVYKGVLPD-NTLVAVKK------PKMVDKILINEVFQHKMR 57
++ + Y+ L+GEG +G V K D +VA+KK KMV KI + E+ +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREI-----K 76
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFV-----------PNGTLFQHVRYQSSQVLKT 106
++ Q+ H+N+V +L VC + K LV+EFV PNG +Q V+ Q++
Sbjct: 77 LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQII-- 134
Query: 107 WKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ + + HS IIH D+K NIL+ + K+ DF + +++ +
Sbjct: 135 ------------NGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179
Query: 167 TATTTKEIETVGWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
E+ T + PE L + + DV++ G ++ E+ G+
Sbjct: 180 VYDD--EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 60 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 115
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 173 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 17/159 (10%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLV-YEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AA 115
++S+++H VK L C + L + NG L +++R ++ +TC R A
Sbjct: 90 VMSRLDHPFFVK-LYFCFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA 144
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
E SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A +
Sbjct: 145 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 176 TVGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
T ++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 202 TAQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 141
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 199 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 52 FQHKMRIISQINHKNVVKILGVC-LETK---VPLLVYEFVPNGTLFQHVRYQSSQVLKTW 107
F+ + + + +NH +V + ET +P +V E+V TL V + T
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 115
Query: 108 KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQT 167
K + + A+ AL++ H G IIH DVK ANI++ KV DF + I+ +
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 168 ATTTKE-IETVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
T T I T +L PE +SDVYS G VL E+LTG+ P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 140
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 198 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 137
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 195 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 141
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 199 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 140
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 198 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 137
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 195 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 138
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 196 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 138
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 196 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 138
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 196 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 140
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 198 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 138
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 196 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 140
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 198 AQYVSPELL--TEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 88 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 143
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 201 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 140
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 198 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 134/320 (41%), Gaps = 61/320 (19%)
Query: 10 YDKRHL-----LGEGGFG----FVYKGVLPDNT----LVAVKKPKMVDKILINEVFQHKM 56
+ KR+L LGEG FG + Y P N +VAVK K ++ ++
Sbjct: 28 FHKRYLKKIRDLGEGHFGKVSLYCYD---PTNDGTGEMVAVKALKADAGPQHRSGWKQEI 84
Query: 57 RIISQINHKNVVKILGVCLETKVP--LLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
I+ + H++++K G C + LV E+VP G+L ++ S + + L A
Sbjct: 85 DILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL----LLFA 140
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKE 173
+ + YLH+ IH D+ + N+LLD++ K+ DF + + H+
Sbjct: 141 QQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDG 197
Query: 174 IETVGWLDP----EYLFWTEKSDVYSFGVVLVELLT----GKHPRS----YVALASNEMT 221
V W P EY F+ SDV+SFGV L ELLT + P + + +A +MT
Sbjct: 198 DSPVFWYAPECLKEYKFYY-ASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT 256
Query: 222 RMVPYFPYPIENNSLRQIL----NFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQV 277
+ L ++L D+ E V L C T + RPT +
Sbjct: 257 VL-----------RLTELLERGERLPRPDKCPAE----VYHLMKNCWETEASFRPTFENL 301
Query: 278 SEQLDSLRRLHENFWAQKNS 297
+ L+ +HE + Q S
Sbjct: 302 ---IPILKTVHEKYQGQAPS 318
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 18/198 (9%)
Query: 16 LGEGGFGFVYKGVL--PDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKIL 71
+GEG FG V++G+ P+N VA+K K + E F + + Q +H ++VK++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 72 GVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
GV E V ++ E G L F VR S + + + A + ++AL YL S
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDL----ASLILYAYQLSTALAYLE---S 509
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+L+ N K+ DF S + + ++ + W+ PE +
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRR 568
Query: 187 WTEKSDVYSFGVVLVELL 204
+T SDV+ FGV + E+L
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++S+++H VK+ + + + NG L +++R ++ +TC R AE
Sbjct: 67 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAE 122
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
SAL+YLH G IIH D+K NILL+++ ++ DF ++ ++S + A + T
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 177 VGWLDPEYLFWTEK-----SDVYSFGVVLVELLTGKHP 209
++ PE L TEK SD+++ G ++ +L+ G P
Sbjct: 180 AQYVSPELL--TEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 136/316 (43%), Gaps = 50/316 (15%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT LVAVK+ + + FQ +++I+
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-FQREIQIL 78
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ +VK GV + LV E++P+G L ++ +++ + L +++
Sbjct: 79 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDAS--RLLLYSSQI 136
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLIS-SHDQTATTTKEIET 176
++YL GS +H D+ + NIL++ K+ADF + L+ D
Sbjct: 137 CKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193
Query: 177 VGWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHPRSYV---ALASNEMTRM------V 224
+ W PE L ++ +SDV+SFGVVL EL T Y S E RM V
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT------YCDKSCSPSAEFLRMMGCERDV 247
Query: 225 PYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
P +E Q L A E+ E L C S +RP+ + QLD L
Sbjct: 248 PALSRLLELLEEGQRLPAPPACPAEVHE------LMKLCWAPSPQDRPSFSALGPQLDML 301
Query: 285 RRLHENFWAQKNSEET 300
W+ ET
Sbjct: 302 -------WSGSRGCET 310
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 132/300 (44%), Gaps = 43/300 (14%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT LVAVK+ + + FQ +++I+
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-FQREIQIL 65
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ +VK GV + LV E++P+G L ++ +++ + L +++
Sbjct: 66 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDAS--RLLLYSSQI 123
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLIS-SHDQTATTTKEIET 176
++YL GS +H D+ + NIL++ K+ADF + L+ D
Sbjct: 124 CKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 180
Query: 177 VGWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHPRSYV---ALASNEMTRM------V 224
+ W PE L ++ +SDV+SFGVVL EL T Y S E RM V
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT------YCDKSCSPSAEFLRMMGSERDV 234
Query: 225 PYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
P +E Q L A E+ E L C S +RP+ + QLD L
Sbjct: 235 PALSRLLELLEEGQRLPAPPACPAEVHE------LMKLCWAPSPQDRPSFSALGPQLDML 288
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 52 FQHKMRIISQINHKNVVKILGVC-LETK---VPLLVYEFVPNGTLFQHVRYQSSQVLKTW 107
F+ + + + +NH +V + ET +P +V E+V TL V + T
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 115
Query: 108 KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQT 167
K + + A+ AL++ H G IIH DVK ANI++ KV DF + I+ +
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 168 ATTTKE-IETVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
T T I T +L PE +SDVYS G VL E+LTG+ P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 16 LGEGGFGFVYKGVL--PDNTLVAVK----KPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG V +G P V+V KP ++ + + F ++ + ++H+N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ GV L + + V E P G+L +R L T R A + A + YL S
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 139
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYL--- 185
IH D+ + N+LL K+ DF L + D W PE L
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 186 FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEM 220
++ SD + FGV L E+ T G+ P ++ L +++
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQI 233
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 136/316 (43%), Gaps = 50/316 (15%)
Query: 10 YDKRHL-----LGEGGFGFV---YKGVLPDNT--LVAVKKPKMVDKILINEVFQHKMRII 59
+++RHL LG+G FG V L DNT LVAVK+ + + FQ +++I+
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-FQREIQIL 66
Query: 60 SQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ +VK GV + LV E++P+G L ++ +++ + L +++
Sbjct: 67 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDAS--RLLLYSSQI 124
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLIS-SHDQTATTTKEIET 176
++YL GS +H D+ + NIL++ K+ADF + L+ D
Sbjct: 125 CKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 181
Query: 177 VGWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHPRSYV---ALASNEMTRM------V 224
+ W PE L ++ +SDV+SFGVVL EL T Y S E RM V
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT------YCDKSCSPSAEFLRMMGCERDV 235
Query: 225 PYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
P +E Q L A E+ E L C S +RP+ + QLD L
Sbjct: 236 PALCRLLELLEEGQRLPAPPACPAEVHE------LMKLCWAPSPQDRPSFSALGPQLDML 289
Query: 285 RRLHENFWAQKNSEET 300
W+ ET
Sbjct: 290 -------WSGSRGCET 298
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 16 LGEGGFGFVYKGVL--PDNTLVAVK----KPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG V +G P V+V KP ++ + + F ++ + ++H+N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ GV L + + V E P G+L +R L T R A + A + YL S
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 129
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYL--- 185
IH D+ + N+LL K+ DF L + D W PE L
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 186 FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEM 220
++ SD + FGV L E+ T G+ P ++ L +++
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQI 223
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 125/307 (40%), Gaps = 66/307 (21%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVK------KPKMVDKILINEVFQHKMRIISQIN 63
LGEG FG V K T VAVK P + +L + ++ Q+N
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL------SEFNVLKQVN 84
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK------------------ 105
H +V+K+ G C + LL+ E+ G+L +R +S +V
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 106 ----TWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLI 161
T + A + + + YL + ++H D+ + NIL+ + K++DF S +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 162 SSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASN 218
D ++ V W+ E LF +T +SDV+SFGV+L E++T L N
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---------LGGN 251
Query: 219 EMTRMVPYFPYP-IENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQV 277
PYP I L +L E E + +L +C + +RP +
Sbjct: 252 ---------PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
Query: 278 SEQLDSL 284
S+ L+ +
Sbjct: 303 SKDLEKM 309
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 16 LGEGGFGFVYKGVL--PDNTLVAVK----KPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG V +G P V+V KP ++ + + F ++ + ++H+N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ GV L + + V E P G+L +R L T R A + A + YL S
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 133
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYL--- 185
IH D+ + N+LL K+ DF L + D W PE L
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 186 FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEM 220
++ SD + FGV L E+ T G+ P ++ L +++
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQI 227
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 10 YDKRHL-----LGEGGFG----FVYKGVLPDNT----LVAVKKPKMVDKILINEVFQHKM 56
+ KR+L LGEG FG + Y P N +VAVK K + +Q ++
Sbjct: 5 FHKRYLKKIRDLGEGHFGKVSLYCYD---PTNDGTGEMVAVKALKEGCGPQLRSGWQREI 61
Query: 57 RIISQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
I+ + H+++VK G C + K LV E+VP G+L ++ + + L A
Sbjct: 62 EILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL----LLFA 117
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKE 173
+ + YLH+ IH + + N+LLD++ K+ DF + + H+
Sbjct: 118 QQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 174
Query: 174 IETVGWLDPEYL----FWTEKSDVYSFGVVLVELLT 205
V W PE L F+ SDV+SFGV L ELLT
Sbjct: 175 DSPVFWYAPECLKECKFYY-ASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 10 YDKRHL-----LGEGGFG----FVYKGVLPDNT----LVAVKKPKMVDKILINEVFQHKM 56
+ KR+L LGEG FG + Y P N +VAVK K + +Q ++
Sbjct: 6 FHKRYLKKIRDLGEGHFGKVSLYCYD---PTNDGTGEMVAVKALKEGCGPQLRSGWQREI 62
Query: 57 RIISQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
I+ + H+++VK G C + K LV E+VP G+L ++ + + L A
Sbjct: 63 EILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL----LLFA 118
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKE 173
+ + YLH+ IH + + N+LLD++ K+ DF + + H+
Sbjct: 119 QQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 175
Query: 174 IETVGWLDPEYL----FWTEKSDVYSFGVVLVELLT 205
V W PE L F+ SDV+SFGV L ELLT
Sbjct: 176 DSPVFWYAPECLKECKFYY-ASDVWSFGVTLYELLT 210
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 16 LGEGGFGFVYKGVL--PDNTLVAVK----KPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG V +G P V+V KP ++ + + F ++ + ++H+N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ GV L + + V E P G+L +R L T R A + A + YL S
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 139
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYL--- 185
IH D+ + N+LL K+ DF L + D W PE L
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 186 FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEM 220
++ SD + FGV L E+ T G+ P ++ L +++
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQI 233
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 125/307 (40%), Gaps = 66/307 (21%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVK------KPKMVDKILINEVFQHKMRIISQIN 63
LGEG FG V K T VAVK P + +L + ++ Q+N
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL------SEFNVLKQVN 84
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK------------------ 105
H +V+K+ G C + LL+ E+ G+L +R +S +V
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 106 ----TWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLI 161
T + A + + + YL + ++H D+ + NIL+ + K++DF S +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 162 SSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASN 218
D ++ V W+ E LF +T +SDV+SFGV+L E++T L N
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---------LGGN 251
Query: 219 EMTRMVPYFPYP-IENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQV 277
PYP I L +L E E + +L +C + +RP +
Sbjct: 252 ---------PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
Query: 278 SEQLDSL 284
S+ L+ +
Sbjct: 303 SKDLEKM 309
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 16 LGEGGFGFVYKGVL--PDNTLVAVK----KPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG V +G P V+V KP ++ + + F ++ + ++H+N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ GV L + + V E P G+L +R L T R A + A + YL S
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 129
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYL--- 185
IH D+ + N+LL K+ DF L + D W PE L
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 186 FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEM 220
++ SD + FGV L E+ T G+ P ++ L +++
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQI 223
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 126/299 (42%), Gaps = 53/299 (17%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPD------NTLVAVKKPKMVDKILINEVFQHKMRIISQ 61
+N + +LG G FG V + VAVK K E ++++++Q
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 62 I-NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVR------------YQSSQVLK--- 105
+ +H+N+V +LG C + L++E+ G L ++R Y++ + L+
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 106 -----TWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVL 160
T++ L A + A +++L +H D+ + N+L+ K+ DF +
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 161 ISSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALAS 217
I S V W+ PE LF +T KSDV+S+G++L E+ + L
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS---------LGV 272
Query: 218 NEMTRMVPYFPYPIENNSLRQILNFQVADE--NEMEEIEIVAKLASKCLRTSGTERPTM 274
N PY P++ N + I N D+ EEI I+ + C +RP+
Sbjct: 273 N------PYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQ---SCWAFDSRKRPSF 322
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 52 FQHKMRIISQINHKNVVKILGVC-LETK---VPLLVYEFVPNGTLFQHVRYQSSQVLKTW 107
F+ + + + +NH +V + ET +P +V E+V TL V + T
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 132
Query: 108 KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQT 167
K + + A+ AL++ H G IIH DVK ANI++ KV DF + I+ +
Sbjct: 133 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 189
Query: 168 ATTTKE-IETVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
T T I T +L PE +SDVYS G VL E+LTG+ P
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 16 LGEGGFGFVYKGVL--PDNTLVAVK----KPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG V +G P V+V KP ++ + + F ++ + ++H+N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ GV L + + V E P G+L +R L T R A + A + YL S
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 129
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYL--- 185
IH D+ + N+LL K+ DF L + D W PE L
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 186 FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEM 220
++ SD + FGV L E+ T G+ P ++ L +++
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQI 223
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 16 LGEGGFGFVYKGVL--PDNTLVAVK----KPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG V +G P V+V KP ++ + + F ++ + ++H+N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ GV L + + V E P G+L +R L T R A + A + YL S
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 133
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYL--- 185
IH D+ + N+LL K+ DF L + D W PE L
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 186 FWTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEM 220
++ SD + FGV L E+ T G+ P ++ L +++
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQI 227
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 26/224 (11%)
Query: 1 SELVKATKNYDK---RHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVD----KILINEVF 52
S+L++ YD+ R +LG+G +G VY G L + +A+K+ D + L E+
Sbjct: 12 SDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIA 71
Query: 53 QHKMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLR 112
HK + HKN+V+ LG E + E VP G+L +R + + +T
Sbjct: 72 LHK-----HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF 126
Query: 113 IAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA--KVADFASSVLISSHDQTATT 170
+ L YLH I+H D+K N+L+ + Y+ K++DF +S ++ + T
Sbjct: 127 YTKQILEGLKYLH---DNQIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTET 182
Query: 171 TKEIETVGWLDPEYL-----FWTEKSDVYSFGVVLVELLTGKHP 209
T+ ++ PE + + + +D++S G ++E+ TGK P
Sbjct: 183 F--TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 62/274 (22%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKI-LINEVFQHKMRIISQINHKNVVK-ILG 72
L+G G +G VYKG L D VAVK ++ INE +++ ++ H N+ + I+G
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLME---HDNIARFIVG 75
Query: 73 ---VCLETKVP-LLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHS-- 126
V + ++ LLV E+ PNG+L +++ +S W + R+A L YLH+
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD----WVSSCRLAHSVTRGLAYLHTEL 131
Query: 127 -LGS---PPIIHGDVKSANILLDDNYTAKVADFASSV------LISSHDQTATTTKEIET 176
G P I H D+ S N+L+ ++ T ++DF S+ L+ ++ E+ T
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 177 VGWLDPEYLFWT----------EKSDVYSFGVVLVELL---------------------- 204
+ ++ PE L ++ D+Y+ G++ E+
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTE 251
Query: 205 TGKHP--RSYVALASNEMTRMVPYFPYPIENNSL 236
G HP L S E R P FP + NSL
Sbjct: 252 VGNHPTFEDMQVLVSREKQR--PKFPEAWKENSL 283
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 125/307 (40%), Gaps = 66/307 (21%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVK------KPKMVDKILINEVFQHKMRIISQIN 63
LGEG FG V K T VAVK P + +L + ++ Q+N
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL------SEFNVLKQVN 84
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLK------------------ 105
H +V+K+ G C + LL+ E+ G+L +R +S +V
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 106 ----TWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLI 161
T + A + + + YL + ++H D+ + NIL+ + K++DF S +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 162 SSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASN 218
D ++ V W+ E LF +T +SDV+SFGV+L E++T L N
Sbjct: 201 YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT---------LGGN 251
Query: 219 EMTRMVPYFPYP-IENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQV 277
PYP I L +L E E + +L +C + +RP +
Sbjct: 252 ---------PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
Query: 278 SEQLDSL 284
S+ L+ +
Sbjct: 303 SKDLEKM 309
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 10 YDKRHL-----LGEGGFG----FVYKGVLPDNT----LVAVKKPKMVDKILINEVFQHKM 56
+ KR+L LGEG FG + Y P N +VAVK K ++ ++
Sbjct: 11 FHKRYLKKIRDLGEGHFGKVSLYCYD---PTNDGTGEMVAVKALKADCGPQHRSGWKQEI 67
Query: 57 RIISQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
I+ + H++++K G C + K LV E+VP G+L ++ S + + L A
Sbjct: 68 DILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL----LLFA 123
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKE 173
+ + YLHS IH ++ + N+LLD++ K+ DF + + H+
Sbjct: 124 QQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 174 IETVGWLDPE----YLFWTEKSDVYSFGVVLVELLT 205
V W PE Y F+ SDV+SFGV L ELLT
Sbjct: 181 DSPVFWYAPECLKEYKFYY-ASDVWSFGVTLYELLT 215
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 16 LGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQ---HKMRIISQINHKNVVKIL 71
+G G FG VY N+ +VA+KK K NE +Q ++R + ++ H N ++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 72 GVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLR---IAAETASALDYLHSLG 128
G L LV E+ +S +L+ K L+ IAA T AL L L
Sbjct: 121 GCYLREHTAWLVMEYCLG---------SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF-- 186
S +IH DVK+ NILL + K+ DF S+ ++ A + T W+ PE +
Sbjct: 172 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAM 225
Query: 187 ----WTEKSDVYSFGVVLVELLTGKHP 209
+ K DV+S G+ +EL K P
Sbjct: 226 DEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 16 LGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQ---HKMRIISQINHKNVVKIL 71
+G G FG VY N+ +VA+KK K NE +Q ++R + ++ H N ++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 72 GVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLR---IAAETASALDYLHSLG 128
G L LV E+ +S +L+ K L+ IAA T AL L L
Sbjct: 82 GCYLREHTAWLVMEYCLGS---------ASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF-- 186
S +IH DVK+ NILL + K+ DF S+ ++ A + T W+ PE +
Sbjct: 133 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAM 186
Query: 187 ----WTEKSDVYSFGVVLVELLTGKHP 209
+ K DV+S G+ +EL K P
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L + F+++ ++I+ +++H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQGKAFKNRELQIMRKLDHCN 74
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYM-YQLF 132
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSR 186
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 14 HLLGEGGFGFVYKG--VLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
++G G FG V G LP VA+K K F + I+ Q +H NV+
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ GV ++ +++ EF+ NG+L +R Q T + + A+ + YL +
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF--TVIQLVGMLRGIAAGMKYLADMN- 129
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE---TVGWLDPE--- 183
+H + + NIL++ N KV+DF S + T T + + W PE
Sbjct: 130 --YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 184 YLFWTEKSDVYSFGVVLVELLT-GKHP 209
Y +T SDV+S+G+V+ E+++ G+ P
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 16 LGEGGFGFVYKGVLP-----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
LG G FG V KG V + K + D L +E+ + ++ Q+++ +V++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA-EANVMQQLDNPYIVRM 77
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+G+C E + +LV E G L +++ Q ++ +K K + + + + + YL
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEE---S 130
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+LL + AK++DF S L + + T V W PE Y
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 187 WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
++ KSDV+SFGV++ E + G+ P Y + +E+T M+
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 227
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 16 LGEGGFGFVYKGVLP-----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
LG G FG V KG V + K + D L +E+ + ++ Q+++ +V++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA-EANVMQQLDNPYIVRM 436
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+G+C E + +LV E G L +++ Q ++ +K K + + + + + YL
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN-- 490
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+LL + AK++DF S L + + T V W PE Y
Sbjct: 491 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 549
Query: 187 WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
++ KSDV+SFGV++ E + G+ P Y + +E+T M+
Sbjct: 550 FSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 586
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMR----IISQINH 64
++D LG+G FG VY N + K + L E +H++R I S + H
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALK-VLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYL 124
N++++ + K L+ EF P G L++ ++ + T + E A AL Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM---EELADALHYC 131
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
H +IH D+K N+L+ K+ADF SV H + T+ +L PE
Sbjct: 132 HERK---VIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEM 184
Query: 185 L---FWTEKSDVYSFGVVLVELLTGKHP 209
+ EK D++ GV+ E L G P
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 113/283 (39%), Gaps = 45/283 (15%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMR----IISQINH 64
++D LG+G FG VY N + K + L E +H++R I S + H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALK-VLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQ----HVRYQSSQVLKTWKTCLRIAAETASA 120
N++++ + K L+ EF P G L++ H R+ + E A A
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR-------SATFMEELADA 126
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
L Y H +IH D+K N+L+ K+ADF SV H + T+ +L
Sbjct: 127 LHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYL 179
Query: 181 DPEYL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLR 237
PE + EK D++ GV+ E L G +P F P + R
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVG-----------------MPPFDSPSHTETHR 222
Query: 238 QILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQ 280
+I+N + + + L SK LR +R ++ V E
Sbjct: 223 RIVNVDLKFPPFLSDGS--KDLISKLLRYHPPQRLPLKGVMEH 263
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 16 LGEGGFGFVYKGVLP-----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
LG G FG V KG V + K + D L +E+ + ++ Q+++ +V++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA-EANVMQQLDNPYIVRM 93
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+G+C E + +LV E G L +++ Q ++ +K K + + + + + YL
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN-- 147
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+LL + AK++DF S L + + T V W PE Y
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 187 WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
++ KSDV+SFGV++ E + G+ P Y + +E+T M+
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 243
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 16 LGEGGFGFVYKGVLP-----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
LG G FG V KG V + K + D L +E+ + ++ Q+++ +V++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA-EANVMQQLDNPYIVRM 93
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+G+C E + +LV E G L +++ Q ++ +K K + + + + + YL
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN-- 147
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+LL + AK++DF S L + + T V W PE Y
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 187 WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
++ KSDV+SFGV++ E + G+ P Y + +E+T M+
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 243
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 16 LGEGGFGFVYKGVLP-----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
LG G FG V KG V + K + D L +E+ + ++ Q+++ +V++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA-EANVMQQLDNPYIVRM 435
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+G+C E + +LV E G L +++ Q ++ +K K + + + + + YL
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN-- 489
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+LL + AK++DF S L + + T V W PE Y
Sbjct: 490 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 548
Query: 187 WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
++ KSDV+SFGV++ E + G+ P Y + +E+T M+
Sbjct: 549 FSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 585
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 10 YDKRHL-----LGEGGFG----FVYKGVLPDNT----LVAVKKPKMVDKILINEVFQHKM 56
+ KR+L LGEG FG + Y P N +VAVK K ++ ++
Sbjct: 11 FHKRYLKKIRDLGEGHFGKVSLYCYD---PTNDGTGEMVAVKALKADCGPQHRSGWKQEI 67
Query: 57 RIISQINHKNVVKILGVCLET--KVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
I+ + H++++K G C + K LV E+VP G+L ++ S + + L A
Sbjct: 68 DILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL----LLFA 123
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKE 173
+ + YLH+ IH ++ + N+LLD++ K+ DF + + H+
Sbjct: 124 QQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 174 IETVGWLDPE----YLFWTEKSDVYSFGVVLVELLT 205
V W PE Y F+ SDV+SFGV L ELLT
Sbjct: 181 DSPVFWYAPECLKEYKFYY-ASDVWSFGVTLYELLT 215
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 16 LGEGGFGFVYKGVLP-----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
LG G FG V KG V + K + D L +E+ + ++ Q+++ +V++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA-EANVMQQLDNPYIVRM 83
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+G+C E + +LV E G L +++ Q ++ +K K + + + + + YL
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEE---S 136
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+LL + AK++DF S L + + T V W PE Y
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 187 WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
++ KSDV+SFGV++ E + G+ P Y + +E+T M+
Sbjct: 197 FSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 233
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 108
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 166
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSR 220
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 16 LGEGGFGFVYKGVLP-----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
LG G FG V KG V + K + D L +E+ + ++ Q+++ +V++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA-EANVMQQLDNPYIVRM 71
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+G+C E + +LV E G L +++ Q ++ +K K + + + + + YL
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEE---S 124
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+LL + AK++DF S L + + T V W PE Y
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 187 WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
++ KSDV+SFGV++ E + G+ P Y + +E+T M+
Sbjct: 185 FSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 221
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 16 LGEGGFGFVYKGVLP-----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
LG G FG V KG V + K + D L +E+ + ++ Q+++ +V++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA-EANVMQQLDNPYIVRM 91
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+G+C E + +LV E G L +++ Q ++ +K K + + + + + YL
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN-- 145
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+LL + AK++DF S L + + T V W PE Y
Sbjct: 146 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 187 WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
++ KSDV+SFGV++ E + G+ P Y + +E+T M+
Sbjct: 205 FSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 241
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 86
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 144
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSR 198
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 16 LGEGGFGFVYKGVLP-----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
LG G FG V KG V + K + D L +E+ + ++ Q+++ +V++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA-EANVMQQLDNPYIVRM 73
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+G+C E + +LV E G L +++ Q ++ +K K + + + + + YL
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEE---S 126
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+LL + AK++DF S L + + T V W PE Y
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 187 WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
++ KSDV+SFGV++ E + G+ P Y + +E+T M+
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 223
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 118/289 (40%), Gaps = 37/289 (12%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVR--------YQSSQVLKTWKTCLRIAAETAS 119
+LG C + PL+V EF G L ++R Y+ + K + T + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 120 ALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGW 179
+ L S IH D+ + NILL + K+ DF + I + W
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKW 216
Query: 180 LDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNS 235
+ PE +F +T +SDV+SFGV+L E+ + G P V + E R
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR------------R 263
Query: 236 LRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
L++ + D E + + C ++RPT ++ E L +L
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 75
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 133
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSR 187
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 14 HLLGEGGFGFVYKGVL--PDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+GEG FG V++G+ P+N VA+K K + E F + + Q +H ++VK
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 70 ILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
++GV E V ++ E G L F VR S + + + A + ++AL YL
Sbjct: 76 LIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDL----ASLILYAYQLSTALAYLE-- 128
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---Y 184
S +H D+ + N+L+ K+ DF S + + ++ + W+ PE +
Sbjct: 129 -SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 186
Query: 185 LFWTEKSDVYSFGVVLVELL 204
+T SDV+ FGV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 93
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 151
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSR 205
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 74
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 132
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSR 186
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 82
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 140
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSR 194
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 16 LGEGGFGFVYKGVLP-----DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
LG G FG V KG V + K + D L +E+ + ++ Q+++ +V++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA-EANVMQQLDNPYIVRM 77
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+G+C E + +LV E G L +++ Q ++ +K K + + + + + YL
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEE---S 130
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+LL + AK++DF S L + + T V W PE Y
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 187 WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMV 224
++ KSDV+SFGV++ E + G+ P Y + +E+T M+
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAML 227
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 86
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 144
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSR 198
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 74
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 132
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSR 186
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 16 LGEGGFGFVYKGVL--PDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKIL 71
+GEG FG V++G+ P+N VA+K K + E F + + Q +H ++VK++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 72 GVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
GV E V ++ E G L F VR S + + + A + ++AL YL S
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDL----ASLILYAYQLSTALAYLE---S 509
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
+H D+ + N+L+ K+ DF S + + ++ + W+ PE +
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRR 568
Query: 187 WTEKSDVYSFGVVLVELL 204
+T SDV+ FGV + E+L
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L + F+++ ++I+ +++H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQGKAFKNRELQIMRKLDHCN 74
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 132
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSR 186
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L + F+++ ++I+ +++H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQGKAFKNRELQIMRKLDHCN 74
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 132
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSR 186
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMR----IISQINH 64
++D LG+G FG VY N + K + L E +H++R I S + H
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALK-VLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYL 124
N++++ + K L+ EF P G L++ ++ + T + E A AL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM---EELADALHYC 130
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
H +IH D+K N+L+ K+ADF SV H + T+ +L PE
Sbjct: 131 HERK---VIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEM 183
Query: 185 L---FWTEKSDVYSFGVVLVELLTGKHP 209
+ EK D++ GV+ E L G P
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 78
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 136
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSR 190
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 108
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 166
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSR 220
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 74
Query: 67 VVKIL------GVCLETKVPLLVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ G + LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 132
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX---ICSR 186
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 35/269 (13%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKK---PKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
LG+G FG VY + + K ++K + + ++ I + ++H N++++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 73 VCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPI 132
+ + L+ E+ P G L++ + Q S +T I E A AL Y H +
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTAT-IMEELADALMYCHGKK---V 144
Query: 133 IHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL---FWTE 189
IH D+K N+LL K+ADF SV H + T+ +L PE + E
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGWSV----HAPSLRRKTMCGTLDYLPPEMIEGRMHNE 200
Query: 190 KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADENE 249
K D++ GV+ ELL G P + + + NE R + ++ L F +
Sbjct: 201 KVDLWCIGVLCYELLVGNPP--FESASHNETYRRI-----------VKVDLKFPASVPTG 247
Query: 250 MEEIEIVAKLASKCLRTSGTERPTMRQVS 278
++ L SK LR + +ER + QVS
Sbjct: 248 AQD------LISKLLRHNPSERLPLAQVS 270
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 153
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 211
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSR 265
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 102
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 160
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSR 214
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 74
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 132
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSR 186
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 87
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 145
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSR 199
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 112
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 170
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSR 224
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 110
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 168
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSR 222
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 9 NYDKRHLLGEGGFGFV--YKGVLPDNTLVAVKKPKMVDKILINEVFQHKM----RIISQI 62
NY + +G+G F V + VL VAVK ++DK +N K+ RI+ +
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGRE-VAVK---IIDKTQLNPTSLQKLFREVRIMKIL 71
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
NH N+VK+ V K LV E+ G +F ++ K + R + SA+
Sbjct: 72 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQ 128
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
Y H I+H D+K+ N+LLD + K+ADF S + ++ T + + P
Sbjct: 129 YCHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCG---SPPYAAP 182
Query: 183 EYLFWTEKS-----DVYSFGVVLVELLTGKHP 209
E LF +K DV+S GV+L L++G P
Sbjct: 183 E-LFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDKILINEVFQHK-MRIISQINHKN 66
+Y ++G G FG VY+ L D+ LVA+K K+L ++ F+++ ++I+ +++H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQDKRFKNRELQIMRKLDHCN 79
Query: 67 VVKILGVCLET-----KVPL-LVYEFVPNGTLFQHVRY--QSSQVLKTWKTCLRIAAETA 118
+V++ + +V L LV ++VP T+++ R+ ++ Q L L + +
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM-YQLF 137
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+L Y+HS G I H D+K N+LLD D K+ DF S+ + + + I +
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSR 191
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T DV+S G VL ELL G+
Sbjct: 192 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 23/209 (11%)
Query: 13 RHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVD----KILINEVFQHKMRIISQINHKNV 67
R +LG+G +G VY G L + +A+K+ D + L E+ HK + HKN+
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK-----HLKHKNI 67
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
V+ LG E + E VP G+L +R + + +T + L YLH
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH-- 125
Query: 128 GSPPIIHGDVKSANILLDDNYTA--KVADFASSVLISSHDQTATTTKEIETVGWLDPEYL 185
I+H D+K N+L+ + Y+ K++DF +S ++ + T T+ ++ PE +
Sbjct: 126 -DNQIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMAPEII 181
Query: 186 -----FWTEKSDVYSFGVVLVELLTGKHP 209
+ + +D++S G ++E+ TGK P
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 125/295 (42%), Gaps = 50/295 (16%)
Query: 16 LGEGGFGFV-----YKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQI-NHKNVV 68
LG G FG V Y + D + VAVK K + E +++++S + NH N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI--------------- 113
+LG C L++ E+ G L +R + + + KT I
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS-KTSPAIMEDDELALDLEDLLS 172
Query: 114 -AAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
+ + A + + L S IH D+ + NILL K+ DF + I +
Sbjct: 173 FSYQVAKGMAF---LASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 173 EIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPY 229
V W+ PE +F +T +SDV+S+G+ L EL + L S+ PY
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LGSS------PYPGM 274
Query: 230 PIENNSLRQIL-NFQ-VADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLD 282
P+++ + I F+ ++ E+ E+ + K C +RPT +Q+ + ++
Sbjct: 275 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIE 326
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 119/290 (41%), Gaps = 38/290 (13%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVRYQSSQVL---------KTWKTCLRIAAETA 118
+LG C + PL+V EF G L ++R + ++ + K + T + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVG 178
+ L S IH D+ + NILL + K+ DF + I +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 179 WLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENN 234
W+ PE +F +T +SDV+SFGV+L E+ + G P V + E R
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR------------ 262
Query: 235 SLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
L++ + D E + + C ++RPT ++ E L +L
Sbjct: 263 RLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 31/273 (11%)
Query: 16 LGEGGFGFVYKG-VLPDNTLVAVKKPKMVDKI-------LINEVFQHKMRIISQINHKNV 67
+G G F VY+ L D VA+KK ++ D + I E+ ++ Q+NH NV
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEI-----DLLKQLNHPNV 94
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVR-YQSSQVLKTWKTCLRIAAETASALDYLHS 126
+K +E +V E G L + ++ ++ + L +T + + SAL+++HS
Sbjct: 95 IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154
Query: 127 LGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF 186
++H D+K AN+ + K+ D SS +T + T ++ PE +
Sbjct: 155 RR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERIH 209
Query: 187 ---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMV---PYFPYPIENNS--LRQ 238
+ KSD++S G +L E+ + P + + + + Y P P ++ S LRQ
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ 269
Query: 239 ILNFQVADENEMEE----IEIVAKLASKCLRTS 267
++N + + E + VAK C +S
Sbjct: 270 LVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 125/295 (42%), Gaps = 50/295 (16%)
Query: 16 LGEGGFGFV-----YKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQI-NHKNVV 68
LG G FG V Y + D + VAVK K + E +++++S + NH N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI--------------- 113
+LG C L++ E+ G L +R + + + KT I
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS-KTSPAIMEDDELALDLEDLLS 165
Query: 114 -AAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
+ + A + + L S IH D+ + NILL K+ DF + I +
Sbjct: 166 FSYQVAKGMAF---LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 173 EIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPY 229
V W+ PE +F +T +SDV+S+G+ L EL + L S+ PY
Sbjct: 223 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LGSS------PYPGM 267
Query: 230 PIENNSLRQIL-NFQ-VADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLD 282
P+++ + I F+ ++ E+ E+ + K C +RPT +Q+ + ++
Sbjct: 268 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIE 319
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 125/295 (42%), Gaps = 50/295 (16%)
Query: 16 LGEGGFGFV-----YKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQI-NHKNVV 68
LG G FG V Y + D + VAVK K + E +++++S + NH N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI--------------- 113
+LG C L++ E+ G L +R + + + KT I
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS-KTSPAIMEDDELALDLEDLLS 149
Query: 114 -AAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
+ + A + + L S IH D+ + NILL K+ DF + I +
Sbjct: 150 FSYQVAKGMAF---LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 173 EIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPY 229
V W+ PE +F +T +SDV+S+G+ L EL + L S+ PY
Sbjct: 207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LGSS------PYPGM 251
Query: 230 PIENNSLRQIL-NFQ-VADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLD 282
P+++ + I F+ ++ E+ E+ + K C +RPT +Q+ + ++
Sbjct: 252 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIE 303
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 125/295 (42%), Gaps = 50/295 (16%)
Query: 16 LGEGGFGFV-----YKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQI-NHKNVV 68
LG G FG V Y + D + VAVK K + E +++++S + NH N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI--------------- 113
+LG C L++ E+ G L +R + + + KT I
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS-KTSPAIMEDDELALDLEDLLS 167
Query: 114 -AAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
+ + A + + L S IH D+ + NILL K+ DF + I +
Sbjct: 168 FSYQVAKGMAF---LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 173 EIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPY 229
V W+ PE +F +T +SDV+S+G+ L EL + L S+ PY
Sbjct: 225 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LGSS------PYPGM 269
Query: 230 PIENNSLRQIL-NFQ-VADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLD 282
P+++ + I F+ ++ E+ E+ + K C +RPT +Q+ + ++
Sbjct: 270 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIE 321
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVRYQSSQVL----------KTWKTCLRIAAET 117
+LG C + PL+V EF G L ++R + ++ + K + T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ L S IH D+ + NILL + K+ DF + I +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIEN 233
W+ PE +F +T +SDV+SFGV+L E+ + G P V + E R
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR----------- 253
Query: 234 NSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
L++ + D E + + C ++RPT ++ E L +L
Sbjct: 254 -RLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVRYQSSQVL----------KTWKTCLRIAAET 117
+LG C + PL+V EF G L ++R + ++ + K + T + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ L S IH D+ + NILL + K+ DF + I +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIEN 233
W+ PE +F +T +SDV+SFGV+L E+ + G P V + E R
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR----------- 253
Query: 234 NSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
L++ + D E + + C ++RPT ++ E L +L
Sbjct: 254 -RLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 125/295 (42%), Gaps = 50/295 (16%)
Query: 16 LGEGGFGFV-----YKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQI-NHKNVV 68
LG G FG V Y + D + VAVK K + E +++++S + NH N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 69 KILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI--------------- 113
+LG C L++ E+ G L +R + + + KT I
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS-KTSPAIMEDDELALDLEDLLS 172
Query: 114 -AAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
+ + A + + L S IH D+ + NILL K+ DF + I +
Sbjct: 173 FSYQVAKGMAF---LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 173 EIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPY 229
V W+ PE +F +T +SDV+S+G+ L EL + L S+ PY
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------LGSS------PYPGM 274
Query: 230 PIENNSLRQIL-NFQ-VADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLD 282
P+++ + I F+ ++ E+ E+ + K C +RPT +Q+ + ++
Sbjct: 275 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIE 326
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 16 LGEGGFGFV-YKGVLPDNTLVAVKKPKMVDK----ILINEVFQHKMRIISQINHKNVVKI 70
+GEG G V V LVAVKK + + +L NEV I+ H+NVV++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV-----IMRDYQHENVVEM 213
Query: 71 LGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
L +V EF+ G L H R Q+ CL + AL LH+
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVL----QALSVLHAQ 266
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY--- 184
G +IH D+KS +ILL + K++DF +S + + T W+ PE
Sbjct: 267 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISR 321
Query: 185 LFWTEKSDVYSFGVVLVELLTGKHP 209
L + + D++S G++++E++ G+ P
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVRYQSSQVL----------KTWKTCLRIAAET 117
+LG C + PL+V EF G L ++R + ++ + K + T + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ L S IH D+ + NILL + K+ DF + I +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIEN 233
W+ PE +F +T +SDV+SFGV+L E+ + G P V + E R
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR----------- 262
Query: 234 NSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
L++ + D E + + C ++RPT ++ E L +L
Sbjct: 263 -RLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 35/287 (12%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVRYQSSQVL------KTWKTCLRIAAETASAL 121
+LG C + PL+V EF G L ++R + ++ + K + T + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLD 181
+ L S IH D+ + NILL + K+ DF + I + W+
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 214
Query: 182 PEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLR 237
PE +F +T +SDV+SFGV+L E+ + G P V + E R L+
Sbjct: 215 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR------------RLK 261
Query: 238 QILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+ + D E + + C ++RPT ++ E L +L
Sbjct: 262 EGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 13 RHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQ--------INH 64
R +L EGGF FVY+ V + + ++L NE + K R I Q H
Sbjct: 33 RRVLAEGGFAFVYEA-----QDVGSGREYALKRLLSNE--EEKNRAIIQEVCFMKKLSGH 85
Query: 65 KNVVKILGVCLETK-------VPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
N+V+ K L+ + G L + ++ S+ + T L+I +T
Sbjct: 86 PNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQT 145
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLIS-------SHDQTATT 170
A+ ++H PPIIH D+K N+LL + T K+ DF S+ IS S + A
Sbjct: 146 CRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALV 204
Query: 171 TKEI---ETVGWLDPEYLFW------TEKSDVYSFGVVLVELLTGKHP 209
+EI T + PE + EK D+++ G +L L +HP
Sbjct: 205 EEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 122/290 (42%), Gaps = 41/290 (14%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVRYQSSQVLK---------TWKTCLRIAAETA 118
+LG C + PL+V EF G L ++R + ++ + T + + + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVG 178
+++L S IH D+ + NILL + K+ DF + I +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 179 WLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENN 234
W+ PE +F +T +SDV+SFGV+L E+ + G P V + E R
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFXR------------ 258
Query: 235 SLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
L++ + D E + + C ++RPT ++ E L +L
Sbjct: 259 RLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 304
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 16 LGEGGFGFV-YKGVLPDNTLVAVKKPKMVDK----ILINEVFQHKMRIISQINHKNVVKI 70
+GEG G V V LVAVKK + + +L NEV I+ H+NVV++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV-----IMRDYQHENVVEM 136
Query: 71 LGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
L +V EF+ G L H R Q+ CL + AL LH+
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVL----QALSVLHAQ 189
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY--- 184
G +IH D+KS +ILL + K++DF +S + + T W+ PE
Sbjct: 190 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISR 244
Query: 185 LFWTEKSDVYSFGVVLVELLTGKHP 209
L + + D++S G++++E++ G+ P
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPD-NTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVV 68
++ + LG GGFG+V + + D VA+K+ + E + +++I+ ++NH NVV
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 69 KI------LGVCLETKVPLLVYEFVPNGTLFQHV-RYQSSQVLKTWKTCLRIAAETASAL 121
L +PLL E+ G L +++ ++++ LK + ++ +SAL
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE-GPIRTLLSDISSAL 135
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLD 181
YLH IIH D+K NI+L + DQ T+ + T+ +L
Sbjct: 136 RYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 192
Query: 182 PEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
PE L +T D +SFG + E +TG P
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPD-NTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVV 68
++ + LG GGFG+V + + D VA+K+ + E + +++I+ ++NH NVV
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 69 KI------LGVCLETKVPLLVYEFVPNGTLFQHV-RYQSSQVLKTWKTCLRIAAETASAL 121
L +PLL E+ G L +++ ++++ LK + ++ +SAL
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE-GPIRTLLSDISSAL 134
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLD 181
YLH IIH D+K NI+L + DQ T+ + T+ +L
Sbjct: 135 RYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 191
Query: 182 PEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
PE L +T D +SFG + E +TG P
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 8 KNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKK------PKMVDKILINEVFQHKMRIIS 60
K Y + +G+G G VY + + VA+++ PK +++INE+ ++
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEIL-----VMR 72
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVR---YQSSQVLKTWKTCLRIAAET 117
+ + N+V L L +V E++ G+L V Q+ + CL+
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----- 127
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
AL++LHS +IH D+KS NILL + + K+ DF I T +K E V
Sbjct: 128 --ALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI-----TPEQSKRSEMV 177
Query: 178 G---WLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
G W+ PE + + K D++S G++ +E++ G+ P
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 16 LGEGGFGFV-YKGVLPDNTLVAVKKPKMVDK----ILINEVFQHKMRIISQINHKNVVKI 70
+GEG G V V LVAVKK + + +L NEV I+ H+NVV++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV-----IMRDYQHENVVEM 93
Query: 71 LGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
L +V EF+ G L H R Q+ CL + AL LH+
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVL----QALSVLHAQ 146
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY--- 184
G +IH D+KS +ILL + K++DF +S + + T W+ PE
Sbjct: 147 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISR 201
Query: 185 LFWTEKSDVYSFGVVLVELLTGKHP 209
L + + D++S G++++E++ G+ P
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVRYQSSQVL----------KTWKTCLRIAAET 117
+LG C + PL+V EF G L ++R + ++ + K + T + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ L S IH D+ + NILL + K+ DF + I +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIEN 233
W+ PE +F +T +SDV+SFGV+L E+ + G P V + E R
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR----------- 262
Query: 234 NSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
L++ + D E + + C ++RPT ++ E L +L
Sbjct: 263 -RLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVRYQSSQVL----------KTWKTCLRIAAET 117
+LG C + PL+V EF G L ++R + ++ + K + T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ L S IH D+ + NILL + K+ DF + I +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIEN 233
W+ PE +F +T +SDV+SFGV+L E+ + G P V + E R
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR----------- 253
Query: 234 NSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
L++ + D E + + C ++RPT ++ E L +L
Sbjct: 254 -RLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 7 TKNYDKRHLLGEGGFGFVYKGVLPD-NTLVAVKKPKMVD----KILINEVFQHKMRIISQ 61
K Y+K LGEG F VYK + N +VA+KK K+ K IN +++++ +
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 62 INHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASAL 121
++H N++ +L LV++F+ V + + ++ T T L
Sbjct: 69 LSHPNIIGLLDAFGHKSNISLVFDFMETDL---EVIIKDNSLVLTPSHIKAYMLMTLQGL 125
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLD 181
+YLH I+H D+K N+LLD+N K+ADF + S ++ ++ T +
Sbjct: 126 EYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR--AYXHQVVTRWYRA 180
Query: 182 PEYLF----WTEKSDVYSFGVVLVELL 204
PE LF + D+++ G +L ELL
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVRYQSSQVL----------KTWKTCLRIAAET 117
+LG C + PL+V EF G L ++R + ++ + K + T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ L S IH D+ + NILL + K+ DF + I +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIEN 233
W+ PE +F +T +SDV+SFGV+L E+ + G P V + E R
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR----------- 253
Query: 234 NSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
L++ + D E + + C ++RPT ++ E L +L
Sbjct: 254 -RLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 32/215 (14%)
Query: 8 KNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKK------PKMVDKILINEVFQHKMRIIS 60
K Y + +G+G G VY + + VA+++ PK +++INE+ ++
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEIL-----VMR 72
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVR---YQSSQVLKTWKTCLRIAAET 117
+ + N+V L L +V E++ G+L V Q+ + CL+
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----- 127
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
AL++LHS +IH D+KS NILL + + K+ DF I+ +T + T
Sbjct: 128 --ALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM--VGTP 180
Query: 178 GWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
W+ PE + + K D++S G++ +E++ G+ P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVRYQSSQVL----------KTWKTCLRIAAET 117
+LG C + PL+V EF G L ++R + ++ + K + T + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ L S IH D+ + NILL + K+ DF + I +
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIEN 233
W+ PE +F +T +SDV+SFGV+L E+ + G P V + E R
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR----------- 264
Query: 234 NSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
L++ + D E + + C ++RPT ++ E L +L
Sbjct: 265 -RLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 310
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 41 KMVDKILINEVFQHKM----RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV 96
K++DK +N K+ RI+ +NH N+VK+ V K L+ E+ G +F ++
Sbjct: 43 KIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL 102
Query: 97 RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA 156
K ++ R + SA+ Y H I+H D+K+ N+LLD + K+ADF
Sbjct: 103 VAHGRMKEKEARSKFR---QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFG 156
Query: 157 SSVLISSHDQTATTTKEIETVGWLDPEYLFWTEKS-----DVYSFGVVLVELLTGKHP 209
S + + T + + PE LF +K DV+S GV+L L++G P
Sbjct: 157 FSNEFTVGGKLDTFCG---SPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 7 TKNYDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
++YD ++G G FG V +K + + K +M+ K + F + I++
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMI-KRSDSAFFWEERDIMAFA 132
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
N VV++ + K +V E++P G L + + V + W AE ALD
Sbjct: 133 NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFY--TAEVVLALD 188
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
+HS+G +IH DVK N+LLD + K+ADF + + + T + T ++ P
Sbjct: 189 AIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA-VGTPDYISP 244
Query: 183 EYL-------FWTEKSDVYSFGVVLVELLTGKHP 209
E L ++ + D +S GV L E+L G P
Sbjct: 245 EVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 16 LGEGGFGFV-YKGVLPDNTLVAVKKPKMVDK----ILINEVFQHKMRIISQINHKNVVKI 70
+GEG G V V LVAVKK + + +L NEV I+ H+NVV++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV-----IMRDYQHENVVEM 91
Query: 71 LGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
L +V EF+ G L H R Q+ CL + AL LH+
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVL----QALSVLHAQ 144
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY--- 184
G +IH D+KS +ILL + K++DF +S + + T W+ PE
Sbjct: 145 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISR 199
Query: 185 LFWTEKSDVYSFGVVLVELLTGKHP 209
L + + D++S G++++E++ G+ P
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVRYQSSQVL----------KTWKTCLRIAAET 117
+LG C + PL+V EF G L ++R + ++ + K + T + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ L S IH D+ + NILL + K+ DF + I +
Sbjct: 192 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 251
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIEN 233
W+ PE +F +T +SDV+SFGV+L E+ + G P V + E R
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR----------- 299
Query: 234 NSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
L++ + D E + + C ++RPT ++ E L +L
Sbjct: 300 -RLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 345
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVRYQSSQVL----------KTWKTCLRIAAET 117
+LG C + PL+V EF G L ++R + ++ + K + T + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ L S IH D+ + NILL + K+ DF + I +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIEN 233
W+ PE +F +T +SDV+SFGV+L E+ + G P V + E R
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR----------- 262
Query: 234 NSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
L++ + D E + + C ++RPT ++ E L +L
Sbjct: 263 -RLKEGTRMRAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 41 KMVDKILINEVFQHKM----RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV 96
K++DK +N K+ RI+ +NH N+VK+ V K LV E+ G +F ++
Sbjct: 45 KIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
Query: 97 RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA 156
K + R + SA+ Y H I+H D+K+ N+LLD + K+ADF
Sbjct: 105 VAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFG 158
Query: 157 SSVLISSHDQTATTTKEIETVGWLDPEYLFWTEKS-----DVYSFGVVLVELLTGKHP 209
S + ++ T + + PE LF +K DV+S GV+L L++G P
Sbjct: 159 FSNEFTFGNKLDTFCG---SPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 41 KMVDKILINEVFQHKM----RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV 96
K++DK +N K+ RI+ +NH N+VK+ V K LV E+ G +F ++
Sbjct: 45 KIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
Query: 97 RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA 156
K + R + SA+ Y H I+H D+K+ N+LLD + K+ADF
Sbjct: 105 VAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFG 158
Query: 157 SSVLISSHDQTATTTKEIETVGWLDPEYLFWTEKS-----DVYSFGVVLVELLTGKHP 209
S + ++ T + + PE LF +K DV+S GV+L L++G P
Sbjct: 159 FSNEFTFGNKLDTFCG---SPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 23/214 (10%)
Query: 7 TKNYDKRHLLGEGGFGFVY---KGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
+ Y + +LG+G FG V + V V + V + E +++++ Q++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCLRIAAETASAL 121
H N++K+ + LV E G LF + R + S+V RI + S +
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIRQVLSGI 163
Query: 122 DYLHSLGSPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKE-IETV 177
Y+H I+H D+K N+LL+ + ++ DF +S+H + + K+ I T
Sbjct: 164 TYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFG----LSTHFEASKKMKDKIGTA 216
Query: 178 GWLDPEYLFWT--EKSDVYSFGVVLVELLTGKHP 209
++ PE L T EK DV+S GV+L LL+G P
Sbjct: 217 YYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPP 250
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 23/214 (10%)
Query: 7 TKNYDKRHLLGEGGFGFVY---KGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
+ Y + +LG+G FG V + V V + V + E +++++ Q++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCLRIAAETASAL 121
H N++K+ + LV E G LF + R + S+V RI + S +
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIRQVLSGI 162
Query: 122 DYLHSLGSPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKE-IETV 177
Y+H I+H D+K N+LL+ + ++ DF +S+H + + K+ I T
Sbjct: 163 TYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFG----LSTHFEASKKMKDKIGTA 215
Query: 178 GWLDPEYLFWT--EKSDVYSFGVVLVELLTGKHP 209
++ PE L T EK DV+S GV+L LL+G P
Sbjct: 216 YYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPP 249
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 23/214 (10%)
Query: 7 TKNYDKRHLLGEGGFGFVY---KGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
+ Y + +LG+G FG V + V V + V + E +++++ Q++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCLRIAAETASAL 121
H N++K+ + LV E G LF + R + S+V RI + S +
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIRQVLSGI 139
Query: 122 DYLHSLGSPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKE-IETV 177
Y+H I+H D+K N+LL+ + ++ DF +S+H + + K+ I T
Sbjct: 140 TYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFG----LSTHFEASKKMKDKIGTA 192
Query: 178 GWLDPEYLFWT--EKSDVYSFGVVLVELLTGKHP 209
++ PE L T EK DV+S GV+L LL+G P
Sbjct: 193 YYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 16 LGEGGFGFV-YKGVLPDNTLVAVKKPKMVDK----ILINEVFQHKMRIISQINHKNVVKI 70
+GEG G V V LVAVKK + + +L NEV I+ H+NVV++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV-----IMRDYQHENVVEM 86
Query: 71 LGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
L +V EF+ G L H R Q+ CL + AL LH+
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVL----QALSVLHAQ 139
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY--- 184
G +IH D+KS +ILL + K++DF +S + + T W+ PE
Sbjct: 140 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISR 194
Query: 185 LFWTEKSDVYSFGVVLVELLTGKHP 209
L + + D++S G++++E++ G+ P
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 16 LGEGGFGFV-YKGVLPDNTLVAVKKPKMVDK----ILINEVFQHKMRIISQINHKNVVKI 70
+GEG G V V LVAVKK + + +L NEV I+ H+NVV++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV-----IMRDYQHENVVEM 82
Query: 71 LGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
L +V EF+ G L H R Q+ CL + AL LH+
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVL----QALSVLHAQ 135
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY--- 184
G +IH D+KS +ILL + K++DF +S + + T W+ PE
Sbjct: 136 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISR 190
Query: 185 LFWTEKSDVYSFGVVLVELLTGKHP 209
L + + D++S G++++E++ G+ P
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 23/214 (10%)
Query: 7 TKNYDKRHLLGEGGFGFVY---KGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
+ Y + +LG+G FG V + V V + V + E +++++ Q++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCLRIAAETASAL 121
H N++K+ + LV E G LF + R + S+V RI + S +
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIRQVLSGI 145
Query: 122 DYLHSLGSPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKE-IETV 177
Y+H I+H D+K N+LL+ + ++ DF +S+H + + K+ I T
Sbjct: 146 TYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFG----LSTHFEASKKMKDKIGTA 198
Query: 178 GWLDPEYLFWT--EKSDVYSFGVVLVELLTGKHP 209
++ PE L T EK DV+S GV+L LL+G P
Sbjct: 199 YYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPP 232
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 37/187 (19%)
Query: 41 KMVDKILINEVFQHKM----RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV 96
K++DK +N K+ RI+ +NH N+VK+ V K L+ E+ G +F ++
Sbjct: 46 KIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL 105
Query: 97 RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA 156
K ++ R + SA+ Y H I+H D+K+ N+LLD + K+ADF
Sbjct: 106 VAHGRMKEKEARSKFR---QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFG 159
Query: 157 SSVLISSHDQTATTTKEIETVGWLD-----PEY----LFWTEKS-----DVYSFGVVLVE 202
S E G LD P Y LF +K DV+S GV+L
Sbjct: 160 FS-------------NEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 206
Query: 203 LLTGKHP 209
L++G P
Sbjct: 207 LVSGSLP 213
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 55/291 (18%)
Query: 16 LGEGGFGFVYKGVLPD--------NTLVAVKKPKMVDKILIN--EVFQHKMRIISQINHK 65
LG+G F ++KGV + T V +K ++DK N E F ++S+++HK
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLK---VLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH 125
++V GVC+ +LV EFV G+L +++ + + WK L +A + A+A+ H
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQLAAAM---H 127
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTA-----KVADFASSVLISSHDQTATTTKEIETV 177
L +IHG+V + NILL +D T K++D S+ + D E +
Sbjct: 128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ------ERI 181
Query: 178 GWLDPEYLFWTEK----SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIEN 233
W+ PE + + +D +SFG L E+ +G + AL
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGD-KPLSAL------------------ 222
Query: 234 NSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+S R++ ++ + + +A L + C+ RP+ R + L+SL
Sbjct: 223 DSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 41 KMVDKILINEVFQHKM----RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV 96
+++DK +N K+ RI+ +NH N+VK+ V K LV E+ G +F ++
Sbjct: 45 RIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
Query: 97 RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA 156
K + R + SA+ Y H I+H D+K+ N+LLD + K+ADF
Sbjct: 105 VAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFG 158
Query: 157 SSVLISSHDQTATTTKEIETVGWLDPEYLFWTEKS-----DVYSFGVVLVELLTGKHP 209
S + ++ T + + PE LF +K DV+S GV+L L++G P
Sbjct: 159 FSNEFTFGNKLDTFCG---SPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPD-NTLVAVKKPKMVDKILINEVFQHKM---RIISQIN 63
++++ +LG+G FG V+ N A+K K D +L+++ + M R++S
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAW 76
Query: 64 HKNVVKILGVCLETKVPLL-VYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
+ + +TK L V E++ G L H+ QS + AAE L
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATF-YAAEIILGLQ 133
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
+LHS G I++ D+K NILLD + K+ADF D A T + T ++ P
Sbjct: 134 FLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--AKTNEFCGTPDYIAP 188
Query: 183 EYLF---WTEKSDVYSFGVVLVELLTGKHP 209
E L + D +SFGV+L E+L G+ P
Sbjct: 189 EILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 41 KMVDKILINEVFQHKM----RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV 96
+++DK +N K+ RI+ +NH N+VK+ V K LV E+ G +F ++
Sbjct: 45 RIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
Query: 97 RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA 156
K + R + SA+ Y H I+H D+K+ N+LLD + K+ADF
Sbjct: 105 VAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFG 158
Query: 157 SSVLISSHDQTATTTKEIETVG---WLDPEYLFWTEKS-----DVYSFGVVLVELLTGKH 208
S ++ K E G + PE LF +K DV+S GV+L L++G
Sbjct: 159 FS------NEFTFGNKLDEFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 209 P 209
P
Sbjct: 212 P 212
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 23/220 (10%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILIN---EVFQHKMRIISQINHKNVVKILG 72
+G G F VYKG L T V V ++ D+ L + F+ + + + H N+V+
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 73 VCLET----KVPLLVYEFVPNGTL---FQHVRYQSSQVLKTWKTCLRIAAETASALDYLH 125
T K +LV E +GTL + + +VL++W C +I L +LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW--CRQIL----KGLQFLH 146
Query: 126 SLGSPPIIHGDVKSANILLDD-NYTAKVADFASSVLI-SSHDQTATTTKEIETVGWLDPE 183
+ +PPIIH D+K NI + + K+ D + L +S + T E + +
Sbjct: 147 TR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEEK 205
Query: 184 YLFWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRM 223
Y E DVY+FG +E T ++P S A+ R+
Sbjct: 206 Y---DESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRV 242
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 130/310 (41%), Gaps = 46/310 (14%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPD-NTLVAVKKPKMVDKILINEVFQHKM---RIISQ 61
N++ +LG+G FG V + + L AVK K D IL ++ + M RI+S
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKK-DVILQDDDVECTMTEKRILSL 79
Query: 62 INHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASA 120
+ + L C +T L V EFV G L H+ Q S+ + AAE SA
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARF-YAAEIISA 136
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWL 180
L +LH G II+ D+K N+LLD K+ADF + TT T ++
Sbjct: 137 LMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFG--MCKEGICNGVTTATFCGTPDYI 191
Query: 181 DPEYL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLR 237
PE L + D ++ GV+L E+L G P F E++
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAP-----------------FEAENEDDLFE 234
Query: 238 QILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMR--QVSEQLDSLRRLHENF---- 291
ILN +V + E A+ L++ T+ PTMR +++ + H F
Sbjct: 235 AILNDEVVYPTWLHED------ATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID 288
Query: 292 WAQKNSEETE 301
WAQ N + E
Sbjct: 289 WAQLNHRQIE 298
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 15 LLGEGGFGFVYKGVLP-DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
L+G GGFG V+K D +K+ K NE + +++ +++++H N+V G
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYN-----NEKAEREVKALAKLDHVNIVHYNG- 71
Query: 74 CLE-----------------TKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
C + TK + EF GTL Q + + + L L + +
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV-LALELFEQ 130
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
+DY+HS +I+ D+K +NI L D K+ DF L++S + T
Sbjct: 131 ITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFG---LVTSLKNDGKRXRSKGT 184
Query: 177 VGWLDPEYLF---WTEKSDVYSFGVVLVELL 204
+ ++ PE + + ++ D+Y+ G++L ELL
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 2 ELVKATKNYDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMR 57
+L ++Y+ ++G G FG V +K + + K +M+ K + F +
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDSAFFWEERD 121
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
I++ N VV++ + + +V E++P G L + + V + W AE
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFY--TAEV 177
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
ALD +HS+G IH DVK N+LLD + K+ADF + + ++ T + T
Sbjct: 178 VLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA-VGTP 233
Query: 178 GWLDPEYL-------FWTEKSDVYSFGVVLVELLTGKHP 209
++ PE L ++ + D +S GV L E+L G P
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 2 ELVKATKNYDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMR 57
+L ++Y+ ++G G FG V +K + + K +M+ K + F +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDSAFFWEERD 126
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
I++ N VV++ + + +V E++P G L + + V + W AE
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFY--TAEV 182
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
ALD +HS+G IH DVK N+LLD + K+ADF + + ++ T + T
Sbjct: 183 VLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA-VGTP 238
Query: 178 GWLDPEYL-------FWTEKSDVYSFGVVLVELLTGKHP 209
++ PE L ++ + D +S GV L E+L G P
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 6 ATKNYDKRHLLGEGGFG--FVYKGVLPDNT-----LVAVKKPKMVDKILINEVFQHKMRI 58
+N++ +LG G +G F+ + + +T + +KK +V K E + + ++
Sbjct: 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV 111
Query: 59 ISQINHKNVVKILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
+ I + L +T+ L L+ +++ G LF H+ SQ + + ++I E
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL----SQRERFTEHEVQIYVGE 167
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
AL++LH LG II+ D+K NILLD N + DF S + D+T T
Sbjct: 168 IVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVA-DETERAYDFCGT 223
Query: 177 VGWLDPEYLFWTEKS-----DVYSFGVVLVELLTGKHP------RSYVALASNEMTRMVP 225
+ ++ P+ + + D +S GV++ ELLTG P ++ A S + + P
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP 283
Query: 226 YFPYPIENNSLRQIL 240
PYP E ++L + L
Sbjct: 284 --PYPQEMSALAKDL 296
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 2 ELVKATKNYDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMR 57
+L ++Y+ ++G G FG V +K + + K +M+ K + F +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDSAFFWEERD 126
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
I++ N VV++ + + +V E++P G L + + V + W AE
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFY--TAEV 182
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
ALD +HS+G IH DVK N+LLD + K+ADF + + ++ T + T
Sbjct: 183 VLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA-VGTP 238
Query: 178 GWLDPEYL-------FWTEKSDVYSFGVVLVELLTGKHP 209
++ PE L ++ + D +S GV L E+L G P
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 16 LGEGGFGFVYKGVLPD-NTLVAVKKPKMVDK----ILINEVFQHKMRIISQINHKNVVKI 70
+GEG G V VAVKK + + +L NEV I+ +H NVV +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVV-----IMRDYHHDNVVDM 107
Query: 71 LGVCLETKVPLLVYEFVPNGTL---FQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
L +V EF+ G L H R Q+ + LR AL YLH+
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLR-------ALSYLHNQ 160
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY--- 184
G +IH D+KS +ILL + K++DF +S + + T W+ PE
Sbjct: 161 G---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK--EVPKRKXLVGTPYWMAPEVISR 215
Query: 185 LFWTEKSDVYSFGVVLVELLTGKHP 209
L + + D++S G++++E++ G+ P
Sbjct: 216 LPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 41 KMVDKILINEVFQHKM----RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV 96
K++DK +N K+ RI+ +NH N+VK+ V K LV E+ G +F ++
Sbjct: 38 KIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 97
Query: 97 RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA 156
K + R + SA+ Y H I+H D+K+ N+LLD + K+ADF
Sbjct: 98 VAHGWMKEKEARAKFR---QIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFG 151
Query: 157 SSVLISSHDQTATTTKEIETVGWLDPEYLFWTEKS-----DVYSFGVVLVELLTGKHP 209
S + ++ T + + PE LF +K DV+S GV+L L++G P
Sbjct: 152 FSNEFTFGNKLDTFCG---SPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 8 KNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKK------PKMVDKILINEVFQHKMRIIS 60
K Y + +G+G G VY + + VA+++ PK +++INE+ ++
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEIL-----VMR 72
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVR---YQSSQVLKTWKTCLRIAAET 117
+ + N+V L L +V E++ G+L V Q+ + CL+
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----- 127
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
AL++LHS +IH D+KS NILL + + K+ DF I+ + + + + T
Sbjct: 128 --ALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSXMVGTP 180
Query: 178 GWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
W+ PE + + K D++S G++ +E++ G+ P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 8 KNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKK------PKMVDKILINEVFQHKMRIIS 60
K Y + +G+G G VY + + VA+++ PK +++INE+ ++
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEIL-----VMR 73
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVR---YQSSQVLKTWKTCLRIAAET 117
+ + N+V L L +V E++ G+L V Q+ + CL+
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----- 128
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
AL++LHS +IH D+KS NILL + + K+ DF I+ + + + + T
Sbjct: 129 --ALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSXMVGTP 181
Query: 178 GWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
W+ PE + + K D++S G++ +E++ G+ P
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 32/215 (14%)
Query: 8 KNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKK------PKMVDKILINEVFQHKMRIIS 60
K Y + +G+G G VY + + VA+++ PK +++INE+ ++
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEIL-----VMR 73
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVR---YQSSQVLKTWKTCLRIAAET 117
+ + N+V L L +V E++ G+L V Q+ + CL+
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----- 128
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
AL++LHS +IH ++KS NILL + + K+ DF I+ +T + T
Sbjct: 129 --ALEFLHS---NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM--VGTP 181
Query: 178 GWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
W+ PE + + K D++S G++ +E++ G+ P
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEV--FQHKMRIISQINHKNVVKILGV 73
LG+G FG VYK + +++A K ++D E+ + ++ I++ +H N+VK+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAK--VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPII 133
++ EF G + V + + L T + +T AL+YLH II
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELERPL-TESQIQVVCKQTLDALNYLHD---NKII 157
Query: 134 HGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVG---WLDPEYLF---- 186
H D+K+ NIL + K+ADF S T T + +G W+ PE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA-----KNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 187 ----WTEKSDVYSFGVVLVELLTGKHP 209
+ K+DV+S G+ L+E+ + P
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 129/291 (44%), Gaps = 55/291 (18%)
Query: 16 LGEGGFGFVYKGVLPD--------NTLVAVKKPKMVDKILIN--EVFQHKMRIISQINHK 65
LG+G F ++KGV + T V +K ++DK N E F ++S+++HK
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLK---VLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH 125
++V GVC +LV EFV G+L +++ + + WK L +A + A A+ H
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQLAWAM---H 127
Query: 126 SLGSPPIIHGDVKSANILL---DDNYTA-----KVADFASSVLISSHDQTATTTKEIETV 177
L +IHG+V + NILL +D T K++D S+ + D E +
Sbjct: 128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ------ERI 181
Query: 178 GWLDPEYLFWTEK----SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIEN 233
W+ PE + + +D +SFG L E+ +G + AL
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGD-KPLSAL------------------ 222
Query: 234 NSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+S R++ ++ + + +A L + C+ RP+ R + L+SL
Sbjct: 223 DSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 45/223 (20%)
Query: 15 LLGEGGFGFVYKGVLP-DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
L+G GGFG V+K D +++ K NE + +++ +++++H N+V G
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYN-----NEKAEREVKALAKLDHVNIVHYNGC 73
Query: 74 -------------CLE----------------TKVPLLVYEFVPNGTLFQHVRYQSSQVL 104
LE TK + EF GTL Q + + + L
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 105 KTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSH 164
L + + +DY+HS +IH D+K +NI L D K+ DF L++S
Sbjct: 134 DKV-LALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFG---LVTSL 186
Query: 165 DQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELL 204
T+ T+ ++ PE + + ++ D+Y+ G++L ELL
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 41 KMVDKILINEVFQHKM----RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV 96
K++DK +N K+ RI+ +NH N+VK+ V K LV E+ G +F ++
Sbjct: 45 KIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
Query: 97 RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA 156
K + R + SA+ Y H I+H D+K+ N+LLD + K+ADF
Sbjct: 105 VAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFG 158
Query: 157 SSVLISSHDQTATTTKEIETVGWLDPEYLFWTEKS-----DVYSFGVVLVELLTGKHP 209
S + ++ + PE LF +K DV+S GV+L L++G P
Sbjct: 159 FSNEFTFGNKLDAFCG---APPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 19/204 (9%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEV--FQHKMRIISQINHKNVVKILGV 73
LG+G FG VYK + +++A K ++D E+ + ++ I++ +H N+VK+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAK--VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPII 133
++ EF G + V + + L T + +T AL+YLH II
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELERPL-TESQIQVVCKQTLDALNYLHD---NKII 157
Query: 134 HGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF------- 186
H D+K+ NIL + K+ADF S + Q + I T W+ PE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF--IGTPYWMAPEVVMCETSKDR 215
Query: 187 -WTEKSDVYSFGVVLVELLTGKHP 209
+ K+DV+S G+ L+E+ + P
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 19 GGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIIS--QINHKNVVKILGV--- 73
G FG V+K L N VAVK + DK + +Q++ + S + H+N+++ +G
Sbjct: 35 GRFGCVWKAQLL-NEYVAVKIFPIQDK----QSWQNEYEVYSLPGMKHENILQFIGAEKR 89
Query: 74 CLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH------- 125
V L L+ F G+L ++ + +W IA A L YLH
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 126 SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL 185
P I H D+KS N+LL +N TA +ADF ++ + T ++ T ++ PE L
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205
Query: 186 -----FWTE---KSDVYSFGVVLVELLT 205
F + + D+Y+ G+VL EL +
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 15 LLGEGGFGFVYKGVLPD-NTLVAVKKPKMVDKILINEVFQHKM---RIISQINHKNVVKI 70
+LG+G FG V+ N A+K K D +L+++ + M R++S +
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 71 LGVCLETKVPLL-VYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ +TK L V E++ G L H+ QS + AAE L +LHS G
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATF-YAAEIILGLQFLHSKG- 138
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF--- 186
I++ D+K NILLD + K+ADF D A T T ++ PE L
Sbjct: 139 --IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--AKTNXFCGTPDYIAPEILLGQK 194
Query: 187 WTEKSDVYSFGVVLVELLTGKHP 209
+ D +SFGV+L E+L G+ P
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 7 TKNYDKRHLLGEGGFGFVY---KGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
+ Y + +LG+G FG V + V V + V + E +++++ Q++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCLRIAAETASAL 121
H N+ K+ + LV E G LF + R + S+V RI + S +
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIRQVLSGI 139
Query: 122 DYLHSLGSPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKE-IETV 177
Y H I+H D+K N+LL+ + ++ DF +S+H + + K+ I T
Sbjct: 140 TYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFG----LSTHFEASKKXKDKIGTA 192
Query: 178 GWLDPEYLFWT--EKSDVYSFGVVLVELLTGKHP 209
++ PE L T EK DV+S GV+L LL+G P
Sbjct: 193 YYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 16 LGEGGFGFVYKGVL---PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
LG G FG V +GV VA+K K + E + +I+ Q+++ +V+++G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 73 VCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPI 132
VC + + +LV E G L + + + ++ + + + + + YL
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEKN---F 131
Query: 133 IHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE-TVGWLDPE---YLFWT 188
+H D+ + N+LL + + AK++DF S + + D T + + W PE + ++
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 189 EKSDVYSFGVVLVELLT-GKHP 209
+SDV+S+GV + E L+ G+ P
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKP 213
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 41/233 (17%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGVLP-DNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
++ ++++ +LG+G FG V K D+ A+KK + ++ L ++ +++ +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVMLLASL 59
Query: 63 NHKNVVKILGVCLETK-------------VPLLVYEFVPNGTLFQ--HVRYQSSQVLKTW 107
NH+ VV+ LE + + E+ NGTL+ H + Q + W
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 108 KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASS--------- 158
R+ + AL Y+HS G IIH D+K NI +D++ K+ DF +
Sbjct: 120 ----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 159 VLISSHDQTATT---TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELL 204
+ + S + ++ T I T ++ E L + EK D+YS G++ E++
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 5 KATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEV--FQHKMRIISQI 62
K + NYD + LG+G F V + V L K K+ + + + RI ++
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 85
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N+V++ E LV++ V G LF+ + + C++ E+ +
Sbjct: 86 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---IA 142
Query: 123 YLHSLGSPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKEIETVGW 179
Y HS G I+H ++K N+LL K+ADF ++ ++ + T G+
Sbjct: 143 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG---TPGY 196
Query: 180 LDPEYLF---WTEKSDVYSFGVVLVELLTGKHP 209
L PE L +++ D+++ GV+L LL G P
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 87/211 (41%), Gaps = 24/211 (11%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
L+G G +G VYKG +A K V E+ Q + +H+N+ G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 75 LETKVP------LLVYEFVPNGTLFQHVRYQSSQVLKT-WKTCLRIAAETASALDYLHSL 127
++ P LV EF G++ ++ LK W I E L +LH
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW--IAYICREILRGLSHLHQH 148
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKE-IETVGWLDPEYLF 186
+IH D+K N+LL +N K+ DF S + D+T I T W+ PE +
Sbjct: 149 ---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTPYWMAPEVIA 202
Query: 187 WTE--------KSDVYSFGVVLVELLTGKHP 209
E KSD++S G+ +E+ G P
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEV--FQHKMRIISQINHKNVVKILGV 73
LG+G FG VYK + +++A K ++D E+ + ++ I++ +H N+VK+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAK--VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPII 133
++ EF G + V + + L T + +T AL+YLH II
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELERPL-TESQIQVVCKQTLDALNYLHD---NKII 157
Query: 134 HGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF------- 186
H D+K+ NIL + K+ADF S + Q I T W+ PE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXF--IGTPYWMAPEVVMCETSKDR 215
Query: 187 -WTEKSDVYSFGVVLVELLTGKHP 209
+ K+DV+S G+ L+E+ + P
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 48 INEVFQHKMRIISQI-NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKT 106
+ E + + I+ Q+ H +++ ++ + LV++ + G LF Y + +V +
Sbjct: 142 VREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFD---YLTEKVALS 198
Query: 107 WKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
K I A+ +LH+ I+H D+K NILLDDN +++DF S H +
Sbjct: 199 EKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFG----FSCHLE 251
Query: 167 TATTTKEI-ETVGWLDPEYL---------FWTEKSDVYSFGVVLVELLTGKHP 209
+E+ T G+L PE L + ++ D+++ GV+L LL G P
Sbjct: 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 5 KATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEV--FQHKMRIISQI 62
K + NYD + LG+G F V + V L K K+ + + + RI ++
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N+V++ E LV++ V G LF+ + + C++ E+ +
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---IA 118
Query: 123 YLHSLGSPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKEIETVGW 179
Y HS G I+H ++K N+LL K+ADF ++ ++ + T G+
Sbjct: 119 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG---TPGY 172
Query: 180 LDPEYLF---WTEKSDVYSFGVVLVELLTGKHP 209
L PE L +++ D+++ GV+L LL G P
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 54 HKMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCL 111
+++ ++ ++H N++K+ V + K LV EF G LF+ + R++ +
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC-----DAA 149
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYT---AKVADFASSVLISSHDQTA 168
I + S + YLH I+H D+K NILL++ + K+ DF S S +
Sbjct: 150 NIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDY 203
Query: 169 TTTKEIETVGWLDPEYL--FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ T ++ PE L + EK DV+S GV++ LL G P + ++ + V
Sbjct: 204 KLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPP--FGGQNDQDIIKKVEK 261
Query: 227 FPYPIENNSLRQI 239
Y + N + I
Sbjct: 262 GKYYFDFNDWKNI 274
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 5 KATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEV--FQHKMRIISQI 62
K + NYD + LG+G F V + V L K K+ + + + RI ++
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N+V++ E LV++ V G LF+ + + C++ E+ +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---IA 119
Query: 123 YLHSLGSPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKEIETVGW 179
Y HS G I+H ++K N+LL K+ADF ++ ++ + T G+
Sbjct: 120 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG---TPGY 173
Query: 180 LDPEYLF---WTEKSDVYSFGVVLVELLTGKHP 209
L PE L +++ D+++ GV+L LL G P
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 5 KATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEV--FQHKMRIISQI 62
K + NYD + LG+G F V + V L K K+ + + + RI ++
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N+V++ E LV++ V G LF+ + + C++ E+ +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---IA 119
Query: 123 YLHSLGSPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKEIETVGW 179
Y HS G I+H ++K N+LL K+ADF ++ ++ + T G+
Sbjct: 120 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG---TPGY 173
Query: 180 LDPEYLF---WTEKSDVYSFGVVLVELLTGKHP 209
L PE L +++ D+++ GV+L LL G P
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 41 KMVDKILINEVFQHKM----RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV 96
K++DK +N K+ RI +NH N+VK+ V K LV E+ G +F ++
Sbjct: 45 KIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYL 104
Query: 97 RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA 156
K + R + SA+ Y H I+H D+K+ N+LLD + K+ADF
Sbjct: 105 VAHGRXKEKEARAKFR---QIVSAVQYCHQ---KFIVHRDLKAENLLLDADXNIKIADFG 158
Query: 157 SSVLISSHDQTATTTKEIETVGWLDPEYLFWTEKS-----DVYSFGVVLVELLTGKHP 209
S + ++ + PE LF +K DV+S GV+L L++G P
Sbjct: 159 FSNEFTFGNKLDAFCG---APPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 32/214 (14%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHK-MRIISQINHKNVV 68
Y ++G G FG V++ L ++ VA+K K+L ++ F+++ ++I+ + H NVV
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIK------KVLQDKRFKNRELQIMRIVKHPNVV 95
Query: 69 KILGVCL-----ETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ETAS 119
+ + +V L LV E+VP T+++ R+ + LK L I +
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAK--LKQTMPMLLIKLYMYQLLR 152
Query: 120 ALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASS-VLISSHDQTATTTKEIETV 177
+L Y+HS+G I H D+K N+LLD + K+ DF S+ +LI+ +
Sbjct: 153 SLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY--- 206
Query: 178 GWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
+ PE +F +T D++S G V+ EL+ G+
Sbjct: 207 -YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 22/180 (12%)
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++S + H ++++ G + + ++ +++ G LF +R SQ AAE
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR--KSQRFPN-PVAKFYAAEV 115
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
AL+YLHS II+ D+K NILLD N K+ DF + + T T
Sbjct: 116 CLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTP 167
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHP-------RSYVALASNEMTRMVPYF 227
++ PE + + + D +SFG+++ E+L G P ++Y + + E+ R P+F
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL-RFPPFF 226
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 33/210 (15%)
Query: 19 GGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQ--INHKNVVKIL----- 71
G FG V+K L N VAVK + DK + +Q + I S + H+N+++ +
Sbjct: 26 GRFGCVWKAQLM-NDFVAVKIFPLQDK----QSWQSEREIFSTPGMKHENLLQFIAAEKR 80
Query: 72 GVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHS----- 126
G LE ++ L+ F G+L +++ + TW +A + L YLH
Sbjct: 81 GSNLEVEL-WLITAFHDKGSLTDYLKGN----IITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 127 ---LGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
P I H D KS N+LL + TA +ADF +V T ++ T ++ PE
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 184 YL-----FWTE---KSDVYSFGVVLVELLT 205
L F + + D+Y+ G+VL EL++
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 5 KATKNYDKRHLLGEGGFGFVYKGVLPDNT-------LVAVKKPKMVDKILINEVFQHKMR 57
++ + Y + +GEG FG K +L +T + + +M K E + ++
Sbjct: 21 QSMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKE--REESRREVA 75
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
+++ + H N+V+ E +V ++ G LF+ + Q VL L +
Sbjct: 76 VLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKG-VLFQEDQILDWFVQI 134
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
AL ++H I+H D+KS NI L + T ++ DF + +++S + A I T
Sbjct: 135 CLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC--IGTP 189
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMV 224
+L PE + KSD+++ G VL EL T KH A + M +V
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCTLKH-----AFEAGSMKNLV 234
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 122/310 (39%), Gaps = 67/310 (21%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINE----VFQHKMRIISQINHKNVVKI 70
L+G+G FG VY G + +++D NE F+ ++ Q H+NVV
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAI-----RLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+G C+ ++ TL+ VR + VL KT +IA E + YLH+ G
Sbjct: 95 MGACMSPPHLAIITSLCKGRTLYSVVR-DAKIVLDVNKT-RQIAQEIVKGMGYLHAKG-- 150
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA----SSVLISSHDQTATTTKEIETVGWL------ 180
I+H D+KS N+ DN + DF S VL + + + GWL
Sbjct: 151 -ILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQN----GWLCHLAPE 204
Query: 181 ---------DPEYLFWTEKSDVYSFGVVLVELLTGKHP---RSYVALASNEMTRMVPYFP 228
+ + L +++ SDV++ G + EL + P + A+ T M P
Sbjct: 205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS 264
Query: 229 YPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL---- 284
+ IL F A E E ERPT ++ + L+ L
Sbjct: 265 QIGMGKEISDILLFCWAFEQE--------------------ERPTFTKLMDMLEKLPKRN 304
Query: 285 RRLHE--NFW 292
RRL +FW
Sbjct: 305 RRLSHPGHFW 314
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 16 LGEGGFGFVYKGVL---PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
LG G FG V +GV VA+K K + E + +I+ Q+++ +V+++G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 73 VCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPI 132
VC + + +LV E G L + + + ++ + + + + + YL
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEKN---F 457
Query: 133 IHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE-TVGWLDPE---YLFWT 188
+H ++ + N+LL + + AK++DF S + + D T + + W PE + ++
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 189 EKSDVYSFGVVLVELLT-GKHP 209
+SDV+S+GV + E L+ G+ P
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKP 539
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 10 YDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKN 66
Y + +GEG +G V Y V T VA+KK + + +++I+ + H+N
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHV--RKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHEN 102
Query: 67 VVKILGV----CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
V+ I + LE + + + + L++ ++ SQ L C + L
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLK---SQQLSNDHICY-FLYQILRGLK 158
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLD 181
Y+HS ++H D+K +N+L++ K+ DF + + HD T T+ + T +
Sbjct: 159 YIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRA 215
Query: 182 PEYLF----WTEKSDVYSFGVVLVELLT------GKH 208
PE + +T+ D++S G +L E+L+ GKH
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILIN----EVFQHKMRIISQINHKNVVKI 70
+LG+G FG V K D K+++K ++ ++ +++H N++K+
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ ++ +V E G LF + R + S+ RI + S + Y+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-----HDAARIIKQVFSGITYMHK-- 139
Query: 129 SPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL 185
I+H D+K NILL+ + K+ DF L + Q I T ++ PE L
Sbjct: 140 -HNIVHRDLKPENILLESKEKDCDIKIIDFG---LSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 186 FWT--EKSDVYSFGVVLVELLTGKHP 209
T EK DV+S GV+L LL+G P
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGVLP-DNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
++ ++++ +LG+G FG V K D+ A+KK + ++ L ++ +++ +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVMLLASL 59
Query: 63 NHKNVVKILGVCLETK-------------VPLLVYEFVPNGTLFQ--HVRYQSSQVLKTW 107
NH+ VV+ LE + + E+ N TL+ H + Q + W
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 108 KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASS--------- 158
R+ + AL Y+HS G IIH D+K NI +D++ K+ DF +
Sbjct: 120 ----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 159 VLISSHDQTATT---TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELL 204
+ + S + ++ T I T ++ E L + EK D+YS G++ E++
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 27/208 (12%)
Query: 15 LLGEGGFGFVYKGVLPDNT----LVAVKKPKMVDKILINEVFQHKM---RIISQINHKNV 67
+LG+G FG K +L D L A+K K D ++ ++ + M R+++ ++
Sbjct: 26 VLGKGSFG---KVMLADRKGTEELYAIKILKK-DVVIQDDDVECTMVEKRVLALLDKPPF 81
Query: 68 VKILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKT-CLRIAAETASALDYLH 125
+ L C +T L V E+V G L H++ QV K + + AAE + L +LH
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ----QVGKFKEPQAVFYAAEISIGLFFLH 137
Query: 126 SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI-ETVGWLDPE- 183
G II+ D+K N++LD K+ADF + H TT+E T ++ PE
Sbjct: 138 KRG---IIYRDLKLDNVMLDSEGHIKIADFG---MCKEHMMDGVTTREFCGTPDYIAPEI 191
Query: 184 --YLFWTEKSDVYSFGVVLVELLTGKHP 209
Y + + D +++GV+L E+L G+ P
Sbjct: 192 IAYQPYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 15 LLGEGGFGFVYKGVLPDNTL-VAVK---KPKMVDKILINEVFQHKMRIISQINHKNVVKI 70
LLG+G F VY+ L VA+K K M ++ V Q++++I Q+ H +++++
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRV-QNEVKIHCQLKHPSILEL 76
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLR-IAAETASALDYLHSLGS 129
++ LV E NG + RY ++V + R + + + YLHS G
Sbjct: 77 YNYFEDSNYVYLVLEMCHNGEM---NRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG- 132
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
I+H D+ +N+LL N K+ADF ++ L H++ T T ++ PE +
Sbjct: 133 --ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCG---TPNYISPEIATRS 187
Query: 189 E---KSDVYSFGVVLVELLTGKHP 209
+SDV+S G + LL G+ P
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 10 YDKRHLLGEGGFGFV-----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN- 63
Y R LGEG FG V YK VA+K + + L+ + H MR+ +I+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYK----TQQKVALK---FISRQLLKKSDMH-MRVEREISY 62
Query: 64 -----HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETA 118
H +++K+ V ++V E+ G LF ++ + T R +
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRM---TEDEGRRFFQQII 118
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVG 178
A++Y H I+H D+K N+LLDDN K+ADF S +++ + T+ +
Sbjct: 119 CAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCG---SPN 172
Query: 179 WLDPEY----LFWTEKSDVYSFGVVLVELLTGKHP 209
+ PE L+ + DV+S G+VL +L G+ P
Sbjct: 173 YAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 15 LLGEGGFG--FVYKGVLPDN--TLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVK 69
+LG G F F+ K L L +KK P D L NE+ ++ +I H+N+V
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEI-----AVLKKIKHENIVT 70
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ + T LV + V G LF + + + T K + + SA+ YLH G
Sbjct: 71 LEDIYESTTHYYLVMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHENG- 126
Query: 130 PPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF 186
I+H D+K N+L ++N + DF +S +Q + T G++ PE L
Sbjct: 127 --IVHRDLKPENLLYLTPEENSKIMITDFG----LSKMEQNGIMSTACGTPGYVAPEVLA 180
Query: 187 ---WTEKSDVYSFGVVLVELLTGKHP 209
+++ D +S GV+ LL G P
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 33/211 (15%)
Query: 16 LGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VYK G L ++ K + ++ ++ ++ I++ +H +VK
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV------EIEILATCDHPYIVK 80
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+LG ++ EF P G + + + + L T + + AL++LHS
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGL-TEPQIQVVCRQMLEALNFLHS--- 135
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVG---WLDPEYLF 186
IIH D+K+ N+L+ ++ADF S T K +G W+ PE +
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSA-----KNLKTLQKRDSFIGTPYWMAPEVVM 190
Query: 187 --------WTEKSDVYSFGVVLVELLTGKHP 209
+ K+D++S G+ L+E+ + P
Sbjct: 191 CETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 56/305 (18%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDK---ILINEVFQHKMRIISQINHKNVVKILG 72
+G+G FG V++G VAVK ++ E++Q M + H+N++ +
Sbjct: 12 IGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREAEIYQTVM-----LRHENILGFIA 65
Query: 73 VCLETKVPL----LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH--- 125
+ LV ++ +G+LF ++ + V + +++A TAS L +LH
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEI 121
Query: 126 --SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE------TV 177
+ G P I H D+KS NIL+ N T +AD +V HD +AT T +I T
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHD-SATDTIDIAPNHRVGTK 177
Query: 178 GWLDPEYL--------FWT-EKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYF- 227
++ PE L F + +++D+Y+ G+V E+ ++ +PY+
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA------RRCSIGGIHEDYQLPYYD 231
Query: 228 --PYPIENNSLRQILNFQVADEN------EMEEIEIVAKLASKCLRTSGTERPTMRQVSE 279
P +R+++ Q N E + ++AK+ +C +G R T ++ +
Sbjct: 232 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 291
Query: 280 QLDSL 284
L L
Sbjct: 292 TLSQL 296
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 11 DKRHLLGE-GGFGFVYKGVLPDNTLVAVKKPKMVDKILINEV--FQHKMRIISQINHKNV 67
D ++GE G FG VYK + +++A K ++D E+ + ++ I++ +H N+
Sbjct: 12 DFWEIIGELGDFGKVYKAQNKETSVLAAAK--VIDTKSEEELEDYMVEIDILASCDHPNI 69
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
VK+L ++ EF G + V + + L T + +T AL+YLH
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPL-TESQIQVVCKQTLDALNYLHD- 126
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKE--IETVGWLDPEYL 185
IIH D+K+ NIL + K+ADF S + + +T ++ I T W+ PE +
Sbjct: 127 --NKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTXIQRRDSFIGTPYWMAPEVV 181
Query: 186 F--------WTEKSDVYSFGVVLVELLTGKHP 209
+ K+DV+S G+ L+E+ + P
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 35/242 (14%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI----NHKNVVKI 70
LGEG F K V N AVK I+ + + + I+ + H N+VK+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVK-------IISKRMEANTQKEITALKLCEGHPNIVKL 71
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQS--SQVLKTWKTCLRIAAETASALDYLHSLG 128
V + LV E + G LF+ ++ + S+ ++ I + SA+ ++H +G
Sbjct: 72 HEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVSAVSHMHDVG 126
Query: 129 SPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL 185
++H D+K N+L +DN K+ DF + L +Q T T+ + PE L
Sbjct: 127 ---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP--CFTLHYAAPELL 181
Query: 186 ---FWTEKSDVYSFGVVLVELLTGK-----HPRSYVALASNEMTRMVPYFPYPIENNSLR 237
+ E D++S GV+L +L+G+ H RS ++ E+ + + + E + +
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWK 241
Query: 238 QI 239
+
Sbjct: 242 NV 243
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 56/305 (18%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDK---ILINEVFQHKMRIISQINHKNVVKILG 72
+G+G FG V++G VAVK ++ E++Q M + H+N++ +
Sbjct: 17 IGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREAEIYQTVM-----LRHENILGFIA 70
Query: 73 VCLETKVPL----LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH--- 125
+ LV ++ +G+LF ++ + V + +++A TAS L +LH
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEI 126
Query: 126 --SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE------TV 177
+ G P I H D+KS NIL+ N T +AD +V HD +AT T +I T
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHD-SATDTIDIAPNHRVGTK 182
Query: 178 GWLDPEYL--------FWT-EKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYF- 227
++ PE L F + +++D+Y+ G+V E+ ++ +PY+
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA------RRCSIGGIHEDYQLPYYD 236
Query: 228 --PYPIENNSLRQILNFQVADEN------EMEEIEIVAKLASKCLRTSGTERPTMRQVSE 279
P +R+++ Q N E + ++AK+ +C +G R T ++ +
Sbjct: 237 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 296
Query: 280 QLDSL 284
L L
Sbjct: 297 TLSQL 301
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKM-VDKILINEVFQHKMRIISQINHKN 66
+ Y K +GEG +G VYK +VA+K+ ++ + I ++ ++ +++H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 67 VVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHS 126
+V ++ V + LV+EF+ +VL KT L+ + L
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDL---------KKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 127 LG---SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
+ I+H D+K N+L++ + K+ADF + + T E+ T+ + P+
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI--PVRSYTHEVVTLWYRAPD 189
Query: 184 YLFWTEKS----DVYSFGVVLVELLTGK 207
L ++K D++S G + E++TGK
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 56/305 (18%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDK---ILINEVFQHKMRIISQINHKNVVKILG 72
+G+G FG V++G VAVK ++ E++Q M + H+N++ +
Sbjct: 14 IGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREAEIYQTVM-----LRHENILGFIA 67
Query: 73 VCLETKVPL----LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH--- 125
+ LV ++ +G+LF ++ + V + +++A TAS L +LH
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEI 123
Query: 126 --SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE------TV 177
+ G P I H D+KS NIL+ N T +AD +V HD +AT T +I T
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHD-SATDTIDIAPNHRVGTK 179
Query: 178 GWLDPEYL--------FWT-EKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYF- 227
++ PE L F + +++D+Y+ G+V E+ ++ +PY+
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA------RRCSIGGIHEDYQLPYYD 233
Query: 228 --PYPIENNSLRQILNFQVADEN------EMEEIEIVAKLASKCLRTSGTERPTMRQVSE 279
P +R+++ Q N E + ++AK+ +C +G R T ++ +
Sbjct: 234 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 293
Query: 280 QLDSL 284
L L
Sbjct: 294 TLSQL 298
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 56/305 (18%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDK---ILINEVFQHKMRIISQINHKNVVKILG 72
+G+G FG V++G VAVK ++ E++Q M + H+N++ +
Sbjct: 11 IGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREAEIYQTVM-----LRHENILGFIA 64
Query: 73 VCLETKVPL----LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH--- 125
+ LV ++ +G+LF ++ + V + +++A TAS L +LH
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEI 120
Query: 126 --SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE------TV 177
+ G P I H D+KS NIL+ N T +AD +V HD +AT T +I T
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHD-SATDTIDIAPNHRVGTK 176
Query: 178 GWLDPEYL--------FWT-EKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYF- 227
++ PE L F + +++D+Y+ G+V E+ ++ +PY+
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA------RRCSIGGIHEDYQLPYYD 230
Query: 228 --PYPIENNSLRQILNFQVADEN------EMEEIEIVAKLASKCLRTSGTERPTMRQVSE 279
P +R+++ Q N E + ++AK+ +C +G R T ++ +
Sbjct: 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290
Query: 280 QLDSL 284
L L
Sbjct: 291 TLSQL 295
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 23/250 (9%)
Query: 5 KATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK--PK-MVDKILINEVFQHKMRIISQ 61
+ K Y + LG+GGF Y+ D V K PK M+ K E ++ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 62 INHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASAL 121
+++ +VV G + +V E +L + + + + + +R +T +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR---QTIQGV 155
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLD 181
YLH+ +IH D+K N+ L+D+ K+ DF + I + T T ++
Sbjct: 156 QYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL--CGTPNYIA 210
Query: 182 PEYLFWTEKS---DVYSFGVVLVELLTGKHP-------RSYVALASNEMTRMVPYFPYPI 231
PE L S D++S G +L LL GK P +Y+ + NE + VP P+
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS--VPRHINPV 268
Query: 232 ENNSLRQILN 241
+ +R++L+
Sbjct: 269 ASALIRRMLH 278
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKM-VDKILINEVFQHKMRIISQINHKN 66
+ Y K +GEG +G VYK +VA+K+ ++ + I ++ ++ +++H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 67 VVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHS 126
+V ++ V + LV+EF+ +VL KT L+ + L
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDL---------KKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 127 LG---SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
+ I+H D+K N+L++ + K+ADF + + T E+ T+ + P+
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI--PVRSYTHEVVTLWYRAPD 189
Query: 184 YLFWTEKS----DVYSFGVVLVELLTGK 207
L ++K D++S G + E++TGK
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILIN----EVFQHKMRIISQINHKNVVKI 70
+LG+G FG V K D K+++K ++ ++ +++H N++K+
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ ++ +V E G LF + R + S+ RI + S + Y+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-----HDAARIIKQVFSGITYMHKHN 141
Query: 129 SPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL 185
I+H D+K NILL+ + K+ DF L + Q I T ++ PE L
Sbjct: 142 ---IVHRDLKPENILLESKEKDCDIKIIDFG---LSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 186 FWT--EKSDVYSFGVVLVELLTGKHP 209
T EK DV+S GV+L LL+G P
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 56/305 (18%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDK---ILINEVFQHKMRIISQINHKNVVKILG 72
+G+G FG V++G VAVK ++ E++Q M + H+N++ +
Sbjct: 37 IGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREAEIYQTVM-----LRHENILGFIA 90
Query: 73 VCLETKVPL----LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH--- 125
+ LV ++ +G+LF ++ + V + +++A TAS L +LH
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEI 146
Query: 126 --SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE------TV 177
+ G P I H D+KS NIL+ N T +AD +V HD +AT T +I T
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHD-SATDTIDIAPNHRVGTK 202
Query: 178 GWLDPEYL--------FWT-EKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYF- 227
++ PE L F + +++D+Y+ G+V E+ ++ +PY+
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA------RRCSIGGIHEDYQLPYYD 256
Query: 228 --PYPIENNSLRQILNFQVADEN------EMEEIEIVAKLASKCLRTSGTERPTMRQVSE 279
P +R+++ Q N E + ++AK+ +C +G R T ++ +
Sbjct: 257 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 316
Query: 280 QLDSL 284
L L
Sbjct: 317 TLSQL 321
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILIN----EVFQHKMRIISQINHKNVVKI 70
+LG+G FG V K D K+++K ++ ++ +++H N++K+
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ ++ +V E G LF + R + S+ RI + S + Y+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-----HDAARIIKQVFSGITYMHKHN 141
Query: 129 SPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL 185
I+H D+K NILL+ + K+ DF L + Q I T ++ PE L
Sbjct: 142 ---IVHRDLKPENILLESKEKDCDIKIIDFG---LSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 186 FWT--EKSDVYSFGVVLVELLTGKHP 209
T EK DV+S GV+L LL+G P
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 33/211 (15%)
Query: 16 LGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G FG VYK G L ++ K + ++ ++ ++ I++ +H +VK
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV------EIEILATCDHPYIVK 72
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+LG ++ EF P G + + + + L T + + AL++LHS
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGL-TEPQIQVVCRQMLEALNFLHS--- 127
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVG---WLDPEYLF 186
IIH D+K+ N+L+ ++ADF S T K +G W+ PE +
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSA-----KNLKTLQKRDSFIGTPYWMAPEVVM 182
Query: 187 --------WTEKSDVYSFGVVLVELLTGKHP 209
+ K+D++S G+ L+E+ + P
Sbjct: 183 CETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 7 TKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+ ++ + LLGEG +G V P +VA+KK + DK L +++I+ H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 66 NVVKILGV----CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASAL 121
N++ I + E + + + + L R S+Q+L I +T A+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIY-QTLRAV 125
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLI--SSHDQTATT------TKE 173
LH +IH D+K +N+L++ N KV DF + +I S+ D + T T+
Sbjct: 126 KVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 174 IETVGWLDPEYLF----WTEKSDVYSFGVVLVELL 204
+ T + PE + ++ DV+S G +L EL
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 56/305 (18%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDK---ILINEVFQHKMRIISQINHKNVVKILG 72
+G+G FG V++G VAVK ++ E++Q M + H+N++ +
Sbjct: 50 IGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREAEIYQTVM-----LRHENILGFIA 103
Query: 73 VCLETKVPL----LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH--- 125
+ LV ++ +G+LF ++ + V + +++A TAS L +LH
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEI 159
Query: 126 --SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE------TV 177
+ G P I H D+KS NIL+ N T +AD +V HD +AT T +I T
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHD-SATDTIDIAPNHRVGTK 215
Query: 178 GWLDPEYL--------FWT-EKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYF- 227
++ PE L F + +++D+Y+ G+V E+ ++ +PY+
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA------RRCSIGGIHEDYQLPYYD 269
Query: 228 --PYPIENNSLRQILNFQVADEN------EMEEIEIVAKLASKCLRTSGTERPTMRQVSE 279
P +R+++ Q N E + ++AK+ +C +G R T ++ +
Sbjct: 270 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329
Query: 280 QLDSL 284
L L
Sbjct: 330 TLSQL 334
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 109/270 (40%), Gaps = 80/270 (29%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLP-DNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+++ +G GGFG V++ D+ A+K+ ++ ++ L E +++ ++++ H +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 68 VKILGVCLE-------------------TKVPL-----------------------LVYE 85
V+ LE T PL V +
Sbjct: 67 VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQ 126
Query: 86 FVPNGT---LFQHVRYQSSQVLKTW------------KTCLRIAAETASALDYLHSLGSP 130
P+ L+ ++ + LK W CL I + A A+++LHS G
Sbjct: 127 LQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG-- 184
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQT-------------ATTTKEIETV 177
++H D+K +NI + KV DF L+++ DQ AT ++ T
Sbjct: 185 -LMHRDLKPSNIFFTMDDVVKVGDFG---LVTAMDQDEEEQTVLTPMPAYATHXGQVGTK 240
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELL 204
++ PE + ++ K D++S G++L ELL
Sbjct: 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 16 LGEGGFGFVYKGVLPD---NTLVAVKKPKMVDKILIN---EVFQHKMRIISQINHKNVVK 69
+G G FG ++ D N LVAVK + +KI N E+ H+ + H N+V+
Sbjct: 27 IGSGNFGVAR--LMRDKQSNELVAVKYIERGEKIAANVKREIINHR-----SLRHPNIVR 79
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHV----RYQSSQVLKTWKTCLRIAAETASALDYLH 125
V L +V E+ G LF+ + R+ + ++ + S + Y H
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCH 132
Query: 126 SLGSPPIIHGDVKSANILLDDNYTA--KVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
++ + H D+K N LLD + K+ DF S H Q +T + T ++ PE
Sbjct: 133 AMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPE 186
Query: 184 YLFWTEK----SDVYSFGVVLVELLTGKHP 209
L E +DV+S GV L +L G +P
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 45 KILINEVFQHKMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTL---FQHVRYQSS 101
++L NEV I+ H NVV++ L + ++ EF+ G L VR
Sbjct: 87 ELLFNEVV-----IMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEE 141
Query: 102 QVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLI 161
Q+ + L+ AL YLH+ G +IH D+KS +ILL + K++DF I
Sbjct: 142 QIATVCEAVLQ-------ALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQI 191
Query: 162 SSHDQTATTTKEIETVGWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
S + T W+ PE + + + D++S G++++E++ G+ P
Sbjct: 192 SK--DVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 7 TKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+ ++ + LLGEG +G V P +VA+KK + DK L +++I+ H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 66 NVVKILGV----CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASAL 121
N++ I + E + + + + L R S+Q+L I +T A+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIY-QTLRAV 125
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLI--SSHDQTATT------TKE 173
LH +IH D+K +N+L++ N KV DF + +I S+ D + T T+
Sbjct: 126 KVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 174 IETVGWLDPEYLF----WTEKSDVYSFGVVLVELL 204
+ T + PE + ++ DV+S G +L EL
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 23/212 (10%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
LLGEG + V V L + AVK + + VF+ + +KN+++++
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPII 133
+ LV+E + G++ H++ Q + R+ + A+ALD+LH+ G I
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHIQKQKH---FNEREASRVVRDVAAALDFLHTKG---IA 133
Query: 134 HGDVKSANILLDDN---YTAKVADFA-SSVLISSHDQTATTTKEIET----VGWLDPEYL 185
H D+K NIL + K+ DF S + ++ T TT E+ T ++ PE +
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 186 --------FWTEKSDVYSFGVVLVELLTGKHP 209
F+ ++ D++S GVVL +L+G P
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 15 LLGEGGFGFVY--KGVLPDNT-----LVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+LG+GG+G V+ + V NT + +KK +V + + I+ ++ H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
V ++ L+ E++ G LF + + + T C +A E + AL +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDT--ACFYLA-EISMALGHLHQK 140
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFW 187
G II+ D+K NI+L+ K+ DF S HD T T T T+ ++ PE L
Sbjct: 141 G---IIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHTF-CGTIEYMAPEILMR 195
Query: 188 TEKS---DVYSFGVVLVELLTGKHP 209
+ + D +S G ++ ++LTG P
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 45/227 (19%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKM-RIIS 60
AT Y+ +G G +G VYK P + L +V+ P + + I+ V + + R +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 61 QINHKNVVKILGVCL------ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTW------- 107
H NVV+++ VC E KV L+ F+HV Q L+T+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLV----------FEHV----DQDLRTYLDKAPPP 107
Query: 108 ----KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISS 163
+T + + LD+LH+ I+H D+K NIL+ T K+ADF + + S
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY 164
Query: 164 HDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
A + T+ + PE L + D++S G + E+ K
Sbjct: 165 QMALAPV---VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 28/237 (11%)
Query: 7 TKN-YDKRHLLGEGGFGFVYKG-VLPDNTLVAVKKPKMV-------DKILINEVFQHKMR 57
TKN + + +LG+GGFG V V + A KK + + + +NE +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNE-----KQ 236
Query: 58 IISQINHKNVVKILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
I+ ++N + VV L ETK L LV + G L H+ Y Q + AAE
Sbjct: 237 ILEKVNSRFVVS-LAYAYETKDALCLVLTLMNGGDLKFHI-YHMGQAGFPEARAVFYAAE 294
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
L+ LH I++ D+K NILLDD+ +++D +V + + T + T
Sbjct: 295 ICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVGT 348
Query: 177 VGWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP--RSYVALASNEMTRMVPYFP 228
VG++ PE + +T D ++ G +L E++ G+ P + + E+ R+V P
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 28/237 (11%)
Query: 7 TKN-YDKRHLLGEGGFGFVYKG-VLPDNTLVAVKKPKMV-------DKILINEVFQHKMR 57
TKN + + +LG+GGFG V V + A KK + + + +NE +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNE-----KQ 236
Query: 58 IISQINHKNVVKILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
I+ ++N + VV L ETK L LV + G L H+ Y Q + AAE
Sbjct: 237 ILEKVNSRFVVS-LAYAYETKDALCLVLTLMNGGDLKFHI-YHMGQAGFPEARAVFYAAE 294
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
L+ LH I++ D+K NILLDD+ +++D +V + + T + T
Sbjct: 295 ICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVGT 348
Query: 177 VGWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP--RSYVALASNEMTRMVPYFP 228
VG++ PE + +T D ++ G +L E++ G+ P + + E+ R+V P
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 21/156 (13%)
Query: 62 INHKNVVKILGVCLETKVPLLVYEFVPNGTLF----QHVRYQSSQVLKTWKTCLRIAAET 117
H +++K+ V +V E+V G LF +H R + + + ++ L
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL------ 121
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
SA+DY H ++H D+K N+LLD + AK+ADF S ++S + T+ +
Sbjct: 122 -SAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCG---SP 174
Query: 178 GWLDPEY----LFWTEKSDVYSFGVVLVELLTGKHP 209
+ PE L+ + D++S GV+L LL G P
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 36/210 (17%)
Query: 16 LGEGGFGFVYKGVLPD---NTLVAVK---KPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+G G FG ++ D N LVAVK + + +D+ + E+ H+ + H N+V+
Sbjct: 27 IGAGNFGVAR--LMRDKQANELVAVKYIERGEKIDENVKREIINHR-----SLRHPNIVR 79
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHV----RYQSSQVLKTWKTCLRIAAETASALDYLH 125
V L +V E+ G LF+ + R+ + ++ + S + Y H
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYAH 132
Query: 126 SLGSPPIIHGDVKSANILLDDNYTA--KVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
++ + H D+K N LLD + K+ADF S H Q + + T ++ PE
Sbjct: 133 AMQ---VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA---VGTPAYIAPE 186
Query: 184 YLFWTEK----SDVYSFGVVLVELLTGKHP 209
L E +DV+S GV L +L G +P
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 7 TKNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+ ++ + LLGEG +G V P +VA+KK + DK L +++I+ H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 66 NVVKILGV----CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASAL 121
N++ I + E + + + + L R S+Q+L I +T A+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIY-QTLRAV 125
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLI--SSHDQTATTTKE------ 173
LH +IH D+K +N+L++ N KV DF + +I S+ D + T ++
Sbjct: 126 KVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 174 IETVGWLDPEYLF----WTEKSDVYSFGVVLVELL 204
+ T + PE + ++ DV+S G +L EL
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 47/234 (20%)
Query: 10 YDKRHLLGEGGFGFVYKGVLP-DNTLVAVKKPKMVDKILIN-EVFQHKMRIISQINHKNV 67
Y+ RHL+G G +G V + + +VA+KK V + LI+ + ++ I++++NH +V
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 68 VKILGVCLETKVP-----LLVYEFVPNG--TLFQHVRYQSSQVLKTWKTCLRIAAETASA 120
VK+L + + V +V E + LF+ Y + +KT L + +
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVK---- 170
Query: 121 LDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA------------SSVLISSHDQ-- 166
Y+HS G I+H D+K AN L++ + + KV DF S + IS +
Sbjct: 171 --YVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 167 ---TATTTKEIE--------TVGWLDPEYLF----WTEKSDVYSFGVVLVELLT 205
T TK ++ T + PE + +TE DV+S G + ELL
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 36/210 (17%)
Query: 16 LGEGGFGFVYKGVLPD---NTLVAVK---KPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+G G FG ++ D N LVAVK + + +D+ + E+ H+ + H N+V+
Sbjct: 26 IGSGNFGVAR--LMRDKQSNELVAVKYIERGEKIDENVKREIINHR-----SLRHPNIVR 78
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHV----RYQSSQVLKTWKTCLRIAAETASALDYLH 125
V L +V E+ G LF+ + R+ + ++ + S + Y H
Sbjct: 79 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCH 131
Query: 126 SLGSPPIIHGDVKSANILLDDNYTA--KVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
++ + H D+K N LLD + K+ DF S H Q +T + T ++ PE
Sbjct: 132 AMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPE 185
Query: 184 YLFWTEK----SDVYSFGVVLVELLTGKHP 209
L E +DV+S GV L +L G +P
Sbjct: 186 VLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 37/221 (16%)
Query: 7 TKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDK----------ILINEVFQHKM 56
+ Y + LG G +G V + D A + K++ K L++EV
Sbjct: 3 SDRYQRVKKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEV----- 55
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCLRIA 114
++ Q++H N++K+ + + LV E G LF + R + S+V I
Sbjct: 56 AVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-----DAAVIM 110
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTT 171
+ S YLH I+H D+K N+LL+ + K+ DF +S+H +
Sbjct: 111 KQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFG----LSAHFEVGGKM 163
Query: 172 KE-IETVGWLDPEYLF--WTEKSDVYSFGVVLVELLTGKHP 209
KE + T ++ PE L + EK DV+S GV+L LL G P
Sbjct: 164 KERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 37/221 (16%)
Query: 7 TKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDK----------ILINEVFQHKM 56
+ Y + LG G +G V + D A + K++ K L++EV
Sbjct: 20 SDRYQRVKKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEV----- 72
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCLRIA 114
++ Q++H N++K+ + + LV E G LF + R + S+V I
Sbjct: 73 AVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-----DAAVIM 127
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTT 171
+ S YLH I+H D+K N+LL+ + K+ DF +S+H +
Sbjct: 128 KQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFG----LSAHFEVGGKM 180
Query: 172 KE-IETVGWLDPEYLF--WTEKSDVYSFGVVLVELLTGKHP 209
KE + T ++ PE L + EK DV+S GV+L LL G P
Sbjct: 181 KERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 23/250 (9%)
Query: 5 KATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK--PK-MVDKILINEVFQHKMRIISQ 61
+ K Y + LG+GGF Y+ D V K PK M+ K E ++ I
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 62 INHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASAL 121
+++ +VV G + +V E +L + + + + + +R +T +
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR---QTIQGV 139
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLD 181
YLH+ +IH D+K N+ L+D+ K+ DF + I + T ++
Sbjct: 140 QYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL--CGTPNYIA 194
Query: 182 PEYLFWTEKS---DVYSFGVVLVELLTGKHP-------RSYVALASNEMTRMVPYFPYPI 231
PE L S D++S G +L LL GK P +Y+ + NE + VP P+
Sbjct: 195 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS--VPRHINPV 252
Query: 232 ENNSLRQILN 241
+ +R++L+
Sbjct: 253 ASALIRRMLH 262
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 23/250 (9%)
Query: 5 KATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK--PK-MVDKILINEVFQHKMRIISQ 61
+ K Y + LG+GGF Y+ D V K PK M+ K E ++ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 62 INHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASAL 121
+++ +VV G + +V E +L + + + + + +R +T +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR---QTIQGV 155
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLD 181
YLH+ +IH D+K N+ L+D+ K+ DF + I + T ++
Sbjct: 156 QYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL--CGTPNYIA 210
Query: 182 PEYLFWTEKS---DVYSFGVVLVELLTGKHP-------RSYVALASNEMTRMVPYFPYPI 231
PE L S D++S G +L LL GK P +Y+ + NE + VP P+
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS--VPRHINPV 268
Query: 232 ENNSLRQILN 241
+ +R++L+
Sbjct: 269 ASALIRRMLH 278
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AA 115
RI+ +N +VK+ + +V E+VP G +F H+R ++ + + R AA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAA 148
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ +YLHSL +I+ D+K N+L+D KVADF + + T E
Sbjct: 149 QIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-- 203
Query: 176 TVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHP 209
+L PE + + + D ++ GV++ E+ G P
Sbjct: 204 ---YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 23/250 (9%)
Query: 5 KATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK--PK-MVDKILINEVFQHKMRIISQ 61
+ K Y + LG+GGF Y+ D V K PK M+ K E ++ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 62 INHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASAL 121
+++ +VV G + +V E +L + + + + + +R +T +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR---QTIQGV 155
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLD 181
YLH+ +IH D+K N+ L+D+ K+ DF + I + T ++
Sbjct: 156 QYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL--CGTPNYIA 210
Query: 182 PEYLFWTEKS---DVYSFGVVLVELLTGKHP-------RSYVALASNEMTRMVPYFPYPI 231
PE L S D++S G +L LL GK P +Y+ + NE + VP P+
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS--VPRHINPV 268
Query: 232 ENNSLRQILN 241
+ +R++L+
Sbjct: 269 ASALIRRMLH 278
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 31/215 (14%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI-----S 54
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNG-TLFQHVRYQSSQVLKTWKTCLRIAAE 116
++ ++NH N+VK+L V LV+EF+ F + L K+ L +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQ 111
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
L + HS ++H D+K N+L++ K+ADF + T T E+ T
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVT 166
Query: 177 VGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ + PE L +++ D++S G + E++T +
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 53
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 54 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKS 107
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
L L S ++H D+K N+L++ K+ADF + T T E+
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVV 165
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 54
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 55 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKS 108
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
L L S ++H D+K N+L++ K+ADF + T T E+
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVV 166
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 7 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI-----S 58
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L L S ++H D+K N+L++ K+ADF + T T E+ T+
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTL 171
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ PE L +++ D++S G + E++T +
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI-----S 54
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L L S ++H D+K N+L++ K+ADF + T T E+ T+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTL 167
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ PE L +++ D++S G + E++T +
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+GEG +G V Y V + VA+KK + + +++I+ + H+N++ I
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 73 VC----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ +E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN 144
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 145 ---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 187 ---WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 102
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 158
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T T E +L PE
Sbjct: 159 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE-----YLAPEI 210
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI-----S 54
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L L S ++H D+K N+L++ K+ADF + T T E+ T+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTL 167
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ PE L +++ D++S G + E++T +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI-----S 53
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L L S ++H D+K N+L++ K+ADF + T T E+ T+
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTL 166
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ PE L +++ D++S G + E++T +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI-----S 61
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L L S ++H D+K N+L++ K+ADF + T T E+ T+
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTL 174
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ PE L +++ D++S G + E++T +
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI-----S 53
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L L S ++H D+K N+L++ K+ADF + T T E+ T+
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTL 166
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ PE L +++ D++S G + E++T +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+GEG +G V Y V + VA+KK + + +++I+ + H+N++ I
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 73 VC----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ +E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN 144
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 145 ---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 187 ---WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI-----S 61
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L L S ++H D+K N+L++ K+ADF + T T E+ T+
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTL 174
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ PE L +++ D++S G + E++T +
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 45 KILINEVFQHKMRIISQINHKNVVKILGVCLE-TKVPL-LVYEFVPNGTLFQHVR--YQS 100
++L++EV ++ ++ H N+V+ ++ T L +V E+ G L + +
Sbjct: 50 QMLVSEV-----NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 101 SQVLKTWKTCLRIAAETASALDYLH--SLGSPPIIHGDVKSANILLDDNYTAKVADFASS 158
Q L + LR+ + AL H S G ++H D+K AN+ LD K+ DF +
Sbjct: 105 RQYLDE-EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Query: 159 VLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSDVYSFGVVLVELLTGKHPRSYVAL 215
++ +HD + T + T ++ PE + + EKSD++S G +L EL P + A
Sbjct: 164 RIL-NHDTSFAKTF-VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP--FTAF 219
Query: 216 ASNEMT--------RMVPYFPYPIENNSLRQILNFQVADENEMEEI 253
+ E+ R +PY N + ++LN + +EEI
Sbjct: 220 SQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+GEG +G V Y V + VA+KK + + +++I+ + H+N++ I
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 73 VC----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ +E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN 144
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 145 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 187 ---WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 87
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 88 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 143
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T T E +L PE
Sbjct: 144 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE-----YLAPEI 195
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+GEG +G V Y V + VA+KK + + +++I+ + H+N++ I
Sbjct: 39 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 73 V----CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ +E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN 152
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 153 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 187 ---WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 210 SKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+GEG +G V Y V + VA+KK + + +++I+ + H+N++ I
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 73 V----CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ +E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN 144
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 145 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 187 ---WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+GEG +G V Y V + VA+KK + + +++I+ + H+N++ I
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 73 V----CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ +E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN 146
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 147 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 187 ---WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 45 KILINEVFQHKMRIISQINHKNVVKILGVCLE-TKVPL-LVYEFVPNGTLFQHVRY--QS 100
++L++EV ++ ++ H N+V+ ++ T L +V E+ G L + +
Sbjct: 50 QMLVSEV-----NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 101 SQVLKTWKTCLRIAAETASALDYLH--SLGSPPIIHGDVKSANILLDDNYTAKVADFASS 158
Q L + LR+ + AL H S G ++H D+K AN+ LD K+ DF +
Sbjct: 105 RQYLDE-EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Query: 159 VLISSHDQTATTTKEIETVGWLDPE---YLFWTEKSDVYSFGVVLVELLTGKHPRSYVAL 215
++ +HD T+ + T ++ PE + + EKSD++S G +L EL P + A
Sbjct: 164 RIL-NHD-TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP--FTAF 219
Query: 216 ASNEMT--------RMVPYFPYPIENNSLRQILNFQVADENEMEEI 253
+ E+ R +PY N + ++LN + +EEI
Sbjct: 220 SQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKM-RIIS 60
AT Y+ +G G +G VYK P + L +V+ P + + I+ V + + R +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 61 QINHKNVVKILGVCL------ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTW------- 107
H NVV+++ VC E KV L+ F+HV Q L+T+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLV----------FEHV----DQDLRTYLDKAPPP 107
Query: 108 ----KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISS 163
+T + + LD+LH+ I+H D+K NIL+ T K+ADF + + S
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY 164
Query: 164 HDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ T+ + PE L + D++S G + E+ K
Sbjct: 165 Q---MALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+GEG +G V N + VA+KK + + +++I+ + H+N++ I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 75 ----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN-- 148
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF--- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 187 -WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+GEG +G V Y V + VA+KK + + +++I+ + H+N++ I
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 73 VC----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ +E + + + L++ ++ +Q L C + L Y+HS
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN 164
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 165 ---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 187 ---WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 47/236 (19%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGVLP-DNTLVAVKKPKMVDKILINEVFQHKMRIISQI 62
++ ++++ +LG+G FG V K D+ A+KK + ++ L ++ +++ +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVXLLASL 59
Query: 63 NHKNVVKILGVCLETK-------------VPLLVYEFVPNGTLFQ--HVRYQSSQVLKTW 107
NH+ VV+ LE + + E+ N TL+ H + Q + W
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 108 KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA----------- 156
R+ + AL Y+HS G IIH ++K NI +D++ K+ DF
Sbjct: 120 ----RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 157 ----SSVLISSHDQTATTTKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELL 204
S L S D T I T ++ E L + EK D YS G++ E +
Sbjct: 173 LKLDSQNLPGSSD---NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+GEG +G V Y V + VA+KK + + +++I+ + H+N++ I
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 73 VC----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ +E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN 144
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 145 ---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 187 ---WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 15 LLGEGGFGFVY--KGVLPDNT-----LVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+LG+GG+G V+ + V NT + +KK +V + + I+ ++ H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
V ++ L+ E++ G LF + + + T C +A E + AL +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDT--ACFYLA-EISMALGHLHQK 140
Query: 128 GSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFW 187
G II+ D+K NI+L+ K+ DF S HD T T T+ ++ PE L
Sbjct: 141 G---IIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHXF-CGTIEYMAPEILMR 195
Query: 188 TEKS---DVYSFGVVLVELLTGKHP 209
+ + D +S G ++ ++LTG P
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+GEG +G V Y V + VA+KK + + +++I+ + H+N++ I
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 73 VC----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ +E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN 164
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 165 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 187 ---WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 94
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFEYL 150
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 151 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 202
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 52 FQHKMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCL 111
F+++++II+ I ++ + G+ ++YE++ N ++ + Y VL TC
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFF--VLDKNYTCF 147
Query: 112 -------RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISS 163
I ++ Y+H+ I H DVK +NIL+D N K++DF S ++
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 164 HDQTATTTKEIETVGWLDPEYLFWTEKSDVYSFGVVLVELLTGKHPR----SYVALASNE 219
+ + T E + E + K D++S G+ L + P S V L +N
Sbjct: 206 KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
Query: 220 MTRMVPY------FPYPIEN 233
T+ + Y F YP+ N
Sbjct: 266 RTKNIEYPLDRNHFLYPLTN 285
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V +K + + K K+V I K RI +N
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RIQQAVNFP 102
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+ P G +F H+R ++ + + R AA+ +YL
Sbjct: 103 FLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 158
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D KVADF + + T E +L PE
Sbjct: 159 HSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AA 115
RI+ +N +VK+ + +V E++P G +F H+R ++ + + R AA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR----RIGRFSEPHARFYAA 148
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ +YLHSL +I+ D+K N+L+D KVADF + + T E
Sbjct: 149 QIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-- 203
Query: 176 TVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHP 209
+L PE + + + D ++ GV++ E+ G P
Sbjct: 204 ---YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 57 RIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AA 115
RI+ +N +VK+ + +V E++P G +F H+R ++ + + R AA
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR----RIGRFSEPHARFYAA 148
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ +YLHSL +I+ D+K N+L+D KVADF + + T E
Sbjct: 149 QIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-- 203
Query: 176 TVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHP 209
+L PE + + + D ++ GV++ E+ G P
Sbjct: 204 ---YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+GEG +G V N + VA+KK + + +++I+ + H+N++ I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 75 ----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN-- 148
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF--- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 187 -WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+GEG +G V N + VA+KK + + +++I+ + H+N++ I +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 75 ----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN-- 142
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF--- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 187 -WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+GEG +G V N + VA+KK + + +++I+ + H+N++ I +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 75 ----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN-- 149
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF--- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 208
Query: 187 -WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+GEG +G V N + VA+KK + + +++I+ + H+N++ I +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 75 ----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN-- 150
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF--- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 151 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 209
Query: 187 -WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 210 GYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+GEG +G V N + VA+KK + + +++I+ + H+N++ I +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 75 ----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN-- 141
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF--- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 142 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 200
Query: 187 -WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 201 GYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+GEG +G V N + VA+KK + + +++I+ + H+N++ I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 75 ----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN-- 148
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF--- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 187 -WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 122
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 178
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 179 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 230
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+GEG +G V N + VA+KK + + +++I+ + H+N++ I +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 75 ----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN-- 142
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF--- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 187 -WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNR 223
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 102
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 158
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 159 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 102
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 158
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 159 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 102
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 158
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 159 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHKM-RIIS 60
AT Y+ +G G +G VYK P + L +V+ P + + I+ V + + R +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 61 QINHKNVVKILGVCL------ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTW------- 107
H NVV+++ VC E KV L+ F+HV Q L+T+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLV----------FEHV----DQDLRTYLDKAPPP 107
Query: 108 ----KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISS 163
+T + + LD+LH+ I+H D+K NIL+ T K+ADF + + S
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY 164
Query: 164 HDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ T+ + PE L + D++S G + E+ K
Sbjct: 165 Q---MALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 21/156 (13%)
Query: 62 INHKNVVKILGVCLETKVPLLVYEFVPNGTLF----QHVRYQSSQVLKTWKTCLRIAAET 117
H +++K+ V +V E+V G LF +H R + + + ++ L
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL------ 121
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
SA+DY H ++H D+K N+LLD + AK+ADF S ++S + + +
Sbjct: 122 -SAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCG---SP 174
Query: 178 GWLDPEY----LFWTEKSDVYSFGVVLVELLTGKHP 209
+ PE L+ + D++S GV+L LL G P
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 16 LGEGGFGFVYKG---VLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
LG G FG V G + V + + + + + + +++ + H +++K+
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 73 VCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPI 132
V +V E+V G LF ++ K R+ + S +DY H +
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYI---CKNGRLDEKESRRLFQQILSGVDYCHRHM---V 137
Query: 133 IHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY----LFWT 188
+H D+K N+LLD + AK+ADF S ++S + + + + PE L+
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCG---SPNYAAPEVISGRLYAG 194
Query: 189 EKSDVYSFGVVLVELLTGKHP 209
+ D++S GV+L LL G P
Sbjct: 195 PEVDIWSSGVILYALLCGTLP 215
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 94
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 150
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 151 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 202
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 9 NYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
NY LGEG FG V Y + + K++ K + + ++ + + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH 125
+++K+ V ++V E+ N LF ++ + + + R + SA++Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKM---SEQEARRFFQQIISAVEYCH 130
Query: 126 SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY- 184
I+H D+K N+LLD++ K+ADF S +++ + T+ + + PE
Sbjct: 131 R---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVI 184
Query: 185 ---LFWTEKSDVYSFGVVLVELLTGKHP 209
L+ + DV+S GV+L +L + P
Sbjct: 185 SGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 123/294 (41%), Gaps = 46/294 (15%)
Query: 9 NYDKRHLLGEGGFGFVYK-GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+++K LG G G V+K P ++A K + K I +++++ + N +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQS---SQVLKTWKTCLRIAAETASALDYL 124
V G + E + G+L Q ++ Q+L +++ L YL
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------KVSIAVIKGLTYL 123
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE 183
I+H DVK +NIL++ K+ DF S LI D+ A + T ++ PE
Sbjct: 124 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DEMANEF--VGTRSYMSPE 176
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHPRSYVALAS------NEMTRMVPYFPY----- 229
L ++ +SD++S G+ LVE+ G++PR +A+ NE +P +
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQ 236
Query: 230 ----------PIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPT 273
P E L+Q++ ++ EE++ L S T G +P+
Sbjct: 237 DFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCS----TIGLNQPS 286
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 14 HLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM---RIISQINHKNVVKI 70
+LG GGFG V+ + + K ++ + +Q M +I+++++ + +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS- 249
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI--AAETASALDYLHSLG 128
L ETK L + + NG ++ Y + ++ I A+ S L++LH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
II+ D+K N+LLDD+ +++D +V + + QT T T G++ PE L
Sbjct: 310 ---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-QTKTKGY-AGTPGFMAPELLLGE 364
Query: 189 EKS---DVYSFGVVLVELLTGKHP 209
E D ++ GV L E++ + P
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+GEG +G V N + VA+KK + + +++I+ + H+N++ I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 75 ----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+E + + + + L++ ++ Q L C + + L Y+HS
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK---CQHLSNDHICYFLY-QILRGLKYIHSAN-- 148
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF--- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 187 -WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 14 HLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM---RIISQINHKNVVKI 70
+LG GGFG V+ + + K ++ + +Q M +I+++++ + +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS- 249
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI--AAETASALDYLHSLG 128
L ETK L + + NG ++ Y + ++ I A+ S L++LH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
II+ D+K N+LLDD+ +++D +V + + QT T T G++ PE L
Sbjct: 310 ---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-QTKTKGY-AGTPGFMAPELLLGE 364
Query: 189 EKS---DVYSFGVVLVELLTGKHP 209
E D ++ GV L E++ + P
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 14 HLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM---RIISQINHKNVVKI 70
+LG GGFG V+ + + K ++ + +Q M +I+++++ + +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS- 249
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI--AAETASALDYLHSLG 128
L ETK L + + NG ++ Y + ++ I A+ S L++LH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
II+ D+K N+LLDD+ +++D +V + + QT T T G++ PE L
Sbjct: 310 ---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-QTKTKGY-AGTPGFMAPELLLGE 364
Query: 189 EKS---DVYSFGVVLVELLTGKHP 209
E D ++ GV L E++ + P
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 9 NYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
NY LGEG FG V Y + + K++ K + + ++ + + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH 125
+++K+ V ++V E+ N LF ++ + + + R + SA++Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKM---SEQEARRFFQQIISAVEYCH 129
Query: 126 SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY- 184
I+H D+K N+LLD++ K+ADF S +++ + T+ + + PE
Sbjct: 130 R---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVI 183
Query: 185 ---LFWTEKSDVYSFGVVLVELLTGKHP 209
L+ + DV+S GV+L +L + P
Sbjct: 184 SGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 14 HLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKM---RIISQINHKNVVKI 70
+LG GGFG V+ + + K ++ + +Q M +I+++++ + +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS- 249
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI--AAETASALDYLHSLG 128
L ETK L + + NG ++ Y + ++ I A+ S L++LH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWT 188
II+ D+K N+LLDD+ +++D +V + + QT T T G++ PE L
Sbjct: 310 ---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-QTKTKGY-AGTPGFMAPELLLGE 364
Query: 189 EKS---DVYSFGVVLVELLTGKHP 209
E D ++ GV L E++ + P
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 132/299 (44%), Gaps = 46/299 (15%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPDNTLVAVKKP-KMVDKILI----NEVFQHKMRIISQINH 64
Y + LG G +G V +L + + V++ K++ K + N ++ ++ ++H
Sbjct: 39 YQRVKKLGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCLRIAAETASALD 122
N++K+ + + LV E G LF + R + ++V I + S +
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEV-----DAAVIIKQVLSGVT 150
Query: 123 YLHSLGSPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKEIETVGW 179
YLH I+H D+K N+LL+ + K+ DF S + + + + + T +
Sbjct: 151 YLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM---KERLGTAYY 204
Query: 180 LDPEYLF--WTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIEN---- 233
+ PE L + EK DV+S GV+L LL G P + E+ R V Y ++
Sbjct: 205 IAPEVLRKKYDEKCDVWSIGVILFILLAGYPP--FGGQTDQEILRKVEKGKYTFDSPEWK 262
Query: 234 -------NSLRQILNF----QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQL 281
+ ++Q+L F +++ + +E + ++ SK + SG E P++ E +
Sbjct: 263 NVSEGAKDLIKQMLQFDSQRRISAQQALEH-PWIKEMCSK--KESGIELPSLANAIENM 318
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+GEG +G V Y V + VA+KK + + +++I+ H+N++ I
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 73 VC----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ +E + + + + L++ ++ +Q L C + + L Y+HS
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICYFLY-QILRGLKYIHSAN 146
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 147 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 187 ---WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
+GEG +G V Y V + VA+KK + + +++I+ H+N++ I
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 73 V----CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
+ +E + + + + L++ ++ +Q L C + + L Y+HS
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICYFLY-QILRGLKYIHSAN 146
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 147 ---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 187 ---WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 9 NYDKRHLL---GEGGFGFVYKGVLPD-NTLVAVK---KPKMVDKILINEVFQHKMRIISQ 61
N+D +L G+G FG V D + A+K K K V++ + VF+ +++I+
Sbjct: 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK-ELQIMQG 71
Query: 62 INHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASAL 121
+ H +V + + + +V + + G L H++ V +T E AL
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ---QNVHFKEETVKLFICELVMAL 128
Query: 122 DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLD 181
DYL + IIH D+K NILLD++ + DF + ++ Q T T ++
Sbjct: 129 DYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAG---TKPYMA 182
Query: 182 PEYLFWTEKSDVYSF-------GVVLVELLTGKHP 209
PE +F + K YSF GV ELL G+ P
Sbjct: 183 PE-MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 124/305 (40%), Gaps = 79/305 (25%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKK--PKMVDKILINEVFQHKMRIISQINHKNVVKILG 72
LG+G +G V+K + +VAVKK + F+ M + H+N+V +L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 73 VC--------------LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETA 118
V +ET + ++ + Q+V YQ +V+K
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIK------------- 123
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA------------SSVLISSHDQ 166
YLHS G ++H D+K +NILL+ KVADF +++ +S ++
Sbjct: 124 ----YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 167 TAT-------TTKEIETVGWLDPEYLF----WTEKSDVYSFGVVLVELLTGKHPRSYVAL 215
T T + T + PE L +T+ D++S G +L E+L GK
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK-------- 228
Query: 216 ASNEMTRMVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMR 275
P FP N L +I+ V D E++E + +K + S E+ +R
Sbjct: 229 ---------PIFPGSSTMNQLERIIG--VIDFPSNEDVESIQSPFAKTMIESLKEKVEIR 277
Query: 276 QVSEQ 280
Q +++
Sbjct: 278 QSNKR 282
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 9 NYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
NY LGEG FG V Y + + K++ K + + ++ + + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH 125
+++K+ V ++V E+ N LF ++ + + + R + SA++Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKM---SEQEARRFFQQIISAVEYCH 124
Query: 126 SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY- 184
I+H D+K N+LLD++ K+ADF S +++ + T+ + + PE
Sbjct: 125 R---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVI 178
Query: 185 ---LFWTEKSDVYSFGVVLVELLTGKHP 209
L+ + DV+S GV+L +L + P
Sbjct: 179 SGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 45 KILINEVFQHKMRIISQINHKNVVKILGVCLE-TKVPL-LVYEFVPNGTLFQHVRY--QS 100
++L++EV ++ ++ H N+V+ ++ T L +V E+ G L + +
Sbjct: 50 QMLVSEV-----NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 101 SQVLKTWKTCLRIAAETASALDYLH--SLGSPPIIHGDVKSANILLDDNYTAKVADFASS 158
Q L + LR+ + AL H S G ++H D+K AN+ LD K+ DF +
Sbjct: 105 RQYLDE-EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Query: 159 VLISSHDQTATTTKE-IETVGWLDPE---YLFWTEKSDVYSFGVVLVELLTGKHPRSYVA 214
++ +HD+ KE + T ++ PE + + EKSD++S G +L EL P + A
Sbjct: 164 RIL-NHDEDF--AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP--FTA 218
Query: 215 LASNEMT--------RMVPYFPYPIENNSLRQILNFQVADENEMEEI 253
+ E+ R +PY N + ++LN + +EEI
Sbjct: 219 FSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 9 NYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
NY LGEG FG V Y + + K++ K + + ++ + + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH 125
+++K+ V ++V E+ N LF ++ + + + R + SA++Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKM---SEQEARRFFQQIISAVEYCH 120
Query: 126 SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY- 184
I+H D+K N+LLD++ K+ADF S +++ + T+ + + PE
Sbjct: 121 R---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVI 174
Query: 185 ---LFWTEKSDVYSFGVVLVELLTGKHP 209
L+ + DV+S GV+L +L + P
Sbjct: 175 SGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 53
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHV-RYQSSQVLKTWKTCLRIA 114
++ ++NH N+VK+L V LV+EF L Q + ++ + L L I
Sbjct: 54 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPL-IK 106
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
+ L L S ++H D+K N+L++ K+ADF + T E+
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEV 164
Query: 175 ETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 102
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+ P G +F H+R ++ + + R AA+ +YL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 158
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+++D KV DF + + T E +L PE
Sbjct: 159 HSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI-----S 53
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNG-TLFQHVRYQSSQVLKTWKTCLRIAAE 116
++ ++NH N+VK+L V LV+E V F + L K+ L +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYL---FQ 110
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
L + HS ++H D+K N+L++ K+ADF + T T E+ T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVT 165
Query: 177 VGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ + PE L +++ D++S G + E++T +
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+GEG +G V N + VA++K + + +++I+ + H+N++ I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 75 ----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN-- 148
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF--- 186
++H D+K +N+LL+ K+ DF + V HD T T+ + T + PE +
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 187 -WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 122
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 178
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T T E +L PE
Sbjct: 179 HSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE-----YLAPEI 230
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 102
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFEYL 158
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 159 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 56
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVP-NGTLFQHVRYQSSQVLKTWKTCLRIA 114
++ ++NH N+VK+L V LV+EF+ + F + L K+ L
Sbjct: 57 -SLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL--- 112
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
+ L + HS ++H D+K N+L++ K+ADF + T E+
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEV 167
Query: 175 ETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 15 LLGEGGFGFVY----KGVLPDNTLVAVKKPKMVDKILINEVFQHKM---RIISQINHKNV 67
+LG+G FG V KG + L AVK K D ++ ++ + M R+++
Sbjct: 348 VLGKGSFGKVMLSERKGT---DELYAVKILKK-DVVIQDDDVECTMVEKRVLALPGKPPF 403
Query: 68 VKILGVCLETKVPL-LVYEFVPNGTLFQHV----RYQSSQVLKTWKTCLRIAAETASALD 122
+ L C +T L V E+V G L H+ R++ + AAE A L
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAV-------FYAAEIAIGLF 456
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI-ETVGWLD 181
+L S G II+ D+K N++LD K+ADF + + TTK T ++
Sbjct: 457 FLQSKG---IIYRDLKLDNVMLDSEGHIKIADFG---MCKENIWDGVTTKXFCGTPDYIA 510
Query: 182 PE---YLFWTEKSDVYSFGVVLVELLTGKHP 209
PE Y + + D ++FGV+L E+L G+ P
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 56
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNG-TLFQHVRYQSSQVLKTWKTCLRIA 114
++ ++NH N+VK+L V LV+EF+ F + L K+ L
Sbjct: 57 -SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYL--- 112
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
+ L + HS ++H D+K N+L++ K+ADF + T E+
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEV 167
Query: 175 ETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 53
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 54 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKS 107
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
L L S ++H D+K N+L++ K+ADF + T E+
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVV 165
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 54
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 55 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKS 108
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
L L S ++H D+K N+L++ K+ADF + T E+
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVV 166
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 56
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 57 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKS 110
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
L L S ++H D+K N+L++ K+ADF + T E+
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVV 168
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 55
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 56 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKS 109
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
L L S ++H D+K N+L++ K+ADF + T E+
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVV 167
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI-----S 53
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L L S ++H D+K N+L++ K+ADF + T E+ T+
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTL 166
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ PE L +++ D++S G + E++T +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 55
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 56 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKS 109
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
L L S ++H D+K N+L++ K+ADF + T E+
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVV 167
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 53
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 54 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKS 107
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
L L S ++H D+K N+L++ K+ADF + T E+
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVV 165
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 54
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 55 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKS 108
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
L L S ++H D+K N+L++ K+ADF + T E+
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVV 166
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 54
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVP-NGTLFQHVRYQSSQVLKTWKTCLRIA 114
++ ++NH N+VK+L V LV+EF+ + F + L K+ L
Sbjct: 55 -SLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL--- 110
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
+ L + HS ++H D+K N+L++ K+ADF + T E+
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEV 165
Query: 175 ETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 113/259 (43%), Gaps = 47/259 (18%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGVLPD-NTLVAVKK-PKMVDKILINEVFQHKMRIISQ 61
VK NY+ +HL+G G +G+VY + N VA+KK +M + ++ + ++ I+++
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 62 INHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASAL 121
+ ++++ + +P + +F L+ + S + K +KT + + + +
Sbjct: 84 LKSDYIIRLHDLI----IPEDLLKF---DELYIVLEIADSDLKKLFKTPIFLTEQHVKTI 136
Query: 122 DYLHSLG-----SPPIIHGDVKSANILLDDNYTAKVADFASSVLISS------------- 163
Y LG IIH D+K AN LL+ + + K+ DF + I+S
Sbjct: 137 LYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEK 196
Query: 164 --------HDQT--ATTTKEIETVGWLDPEYLF----WTEKSDVYSFGVVLVELLTGKHP 209
H++ T + T + PE + +T D++S G + ELL
Sbjct: 197 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMM-- 254
Query: 210 RSYVALASNEMTRMVPYFP 228
+S++ N T P FP
Sbjct: 255 KSHI----NNPTNRFPLFP 269
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 57
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 58 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKS 111
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
L L S ++H D+K N+L++ K+ADF + T E+
Sbjct: 112 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVV 169
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 53
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVR-YQSSQVLKTWKTCLRIA 114
++ ++NH N+VK+L V LV+EF L Q ++ + + L L I
Sbjct: 54 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPL-IK 106
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
+ L L S ++H D+K N+L++ K+ADF + T E+
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEV 164
Query: 175 ETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 55
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 56 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKS 109
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
L L S ++H D+K N+L++ K+ADF + T E+
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVV 167
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 53
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 54 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKS 107
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
L L S ++H D+K N+L++ K+ADF + T E+
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVV 165
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI-----S 53
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L L S ++H D+K N+L++ K+ADF + T E+ T+
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTL 166
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ PE L +++ D++S G + E++T +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+ K ++ V I E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALXKIRLDTETEGVPSTAIREI-----S 54
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L L S ++H D+K N+L++ K+ADF + T T E+ T+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTL 167
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ PE L +++ D++S G + E++T +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 33/229 (14%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKP------KMVDKILINEV-----FQH 54
+++D ++G G + V LV +KK K+V K L+N+ Q
Sbjct: 18 GLQDFDLLRVIGRGSYAKV--------LLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT 69
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI 113
+ + Q ++ + L C +T+ L V E+V G L H++ Q K + R
Sbjct: 70 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR----KLPEEHARF 125
Query: 114 -AAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
+AE + AL+YLH G II+ D+K N+LLD K+ D+ + TT+
Sbjct: 126 YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYG--MCKEGLRPGDTTSX 180
Query: 173 EIETVGWLDPEYLFWTEKS---DVYSFGVVLVELLTGKHPRSYVALASN 218
T ++ PE L + D ++ GV++ E++ G+ P V + N
Sbjct: 181 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 229
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+ K ++ V I E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALXKIRLDTETEGVPSTAIREI-----S 53
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L L S ++H D+K N+L++ K+ADF + T T E+ T+
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTL 166
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ PE L +++ D++S G + E++T +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 102
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 158
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 159 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 56
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 57 -SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKS 110
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
L L S ++H D+K N+L++ K+ADF + T E+
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVV 168
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 16 LGEGGFGFVYKGVLPD---NTLVAVK---KPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+G G FG ++ D N LVAVK + + +D+ + E+ H+ + H N+V+
Sbjct: 27 IGSGNFGVAR--LMRDKQSNELVAVKYIERGEKIDENVKREIINHR-----SLRHPNIVR 79
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHV----RYQSSQVLKTWKTCLRIAAETASALDYLH 125
V L +V E+ G LF+ + R+ + ++ + S + Y H
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCH 132
Query: 126 SLGSPPIIHGDVKSANILLDDNYTA--KVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
++ + H D+K N LLD + K+ F S H Q +T + T ++ PE
Sbjct: 133 AMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST---VGTPAYIAPE 186
Query: 184 YLFWTEK----SDVYSFGVVLVELLTGKHP 209
L E +DV+S GV L +L G +P
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHKMR 57
+N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI-----S 55
Query: 58 IISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ ++NH N+VK+L V LV+EF L Q ++ T I +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L L S ++H D+K N+L++ K+ADF + T E+ T+
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTL 168
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
+ PE L +++ D++S G + E++T +
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+VP G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 15 LLGEGGFGFVY----KGVLPDNTLVAVKKPKMVDKILINEVFQHKM---RIISQINHKNV 67
+LG+G FG V KG + L AVK K D ++ ++ + M R+++
Sbjct: 27 VLGKGSFGKVMLSERKGT---DELYAVKILKK-DVVIQDDDVECTMVEKRVLALPGKPPF 82
Query: 68 VKILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKT--CLRIAAETASALDYL 124
+ L C +T L V E+V G L H+ Q + +K + AAE A L +L
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI-ETVGWLDPE 183
S G II+ D+K N++LD K+ADF + + TTK T ++ PE
Sbjct: 138 QSKG---IIYRDLKLDNVMLDSEGHIKIADFG---MCKENIWDGVTTKXFCGTPDYIAPE 191
Query: 184 ---YLFWTEKSDVYSFGVVLVELLTGKHP 209
Y + + D ++FGV+L E+L G+ P
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 55
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVP-NGTLFQHVRYQSSQVLKTWKTCLRIA 114
++ ++NH N+VK+L V LV+EF+ + F + L K+ L
Sbjct: 56 -SLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL--- 111
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
+ L + HS ++H D+K N+L++ K+ADF + T E+
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEV 166
Query: 175 ETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 56
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVP-NGTLFQHVRYQSSQVLKTWKTCLRIA 114
++ ++NH N+VK+L V LV+EF+ + F + L K+ L
Sbjct: 57 -SLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL--- 112
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
+ L + HS ++H D+K N+L++ K+ADF + T E+
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEV 167
Query: 175 ETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILIN-EVFQHKMRIISQINHKNVVKILGVC 74
LG G FG V+ + L V K D+ + E + ++ ++ ++H N++KI V
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 75 LETKVPLLVYEFVPNGTLFQH-VRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPII 133
+ +V E G L + V Q+ + + + +AL Y H S ++
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVV 146
Query: 134 HGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFW--T 188
H D+K NIL D + K+ DF + L S + +T T ++ PE T
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVFKRDVT 203
Query: 189 EKSDVYSFGVVLVELLTGKHPRSYVAL 215
K D++S GVV+ LLTG P + +L
Sbjct: 204 FKCDIWSAGVVMYFLLTGCLPFTGTSL 230
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 33/229 (14%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKP------KMVDKILINE-----VFQH 54
+++D ++G G + V LV +KK K+V K L+N+ Q
Sbjct: 3 GLQDFDLLRVIGRGSYAKV--------LLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT 54
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI 113
+ + Q ++ + L C +T+ L V E+V G L H++ Q K + R
Sbjct: 55 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR----KLPEEHARF 110
Query: 114 -AAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
+AE + AL+YLH G II+ D+K N+LLD K+ D+ + TT+
Sbjct: 111 YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYG--MCKEGLRPGDTTSX 165
Query: 173 EIETVGWLDPEYLFWTEKS---DVYSFGVVLVELLTGKHPRSYVALASN 218
T ++ PE L + D ++ GV++ E++ G+ P V + N
Sbjct: 166 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 214
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+GEG +G V N + VA+KK + + +++I+ + H+N++ I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 75 ----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN-- 148
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF--- 186
++H D+K +N+LL+ K+ DF + V HD T + + T + PE +
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 207
Query: 187 -WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
+GEG +G V N + VA+KK + + +++I+ + H+N++ I +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 75 ----LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+E + + + + L++ ++ +Q L C + L Y+HS
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICY-FLYQILRGLKYIHSAN-- 149
Query: 131 PIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPEYLF--- 186
++H D+K +N+LL+ K+ DF + V HD T + + T + PE +
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 208
Query: 187 -WTEKSDVYSFGVVLVELLTGK 207
+T+ D++S G +L E+L+ +
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNR 230
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPD----NTLVAVKK-PKMVDKILINEVFQHKMRIISQI 62
K ++ + LG G F V VL + L AVK PK K + + ++++ ++ +I
Sbjct: 22 KIFEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSI-ENEIAVLRKI 77
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H+N+V + + LV + V G LF + + K T +R + A+
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR---QVLDAVY 134
Query: 123 YLHSLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGW 179
YLH +G I+H D+K N+L D+ ++DF S + D +T T G+
Sbjct: 135 YLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACG---TPGY 188
Query: 180 LDPEYLF---WTEKSDVYSFGVVLVELLTGKHP 209
+ PE L +++ D +S GV+ LL G P
Sbjct: 189 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 88
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 89 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 144
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D+ +V DF + + T E +L PE
Sbjct: 145 HSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 196
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 197 ILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 137/346 (39%), Gaps = 84/346 (24%)
Query: 3 LVKATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEV-------FQHK 55
L++ K Y + +G+G +G V + +N A++ K+++K I ++ + +
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAI--ENQTRAIRAIKIMNKNKIRQINPKDVERIKTE 78
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQ--------------------- 94
+R++ +++H N+ ++ V + + LV E G L
Sbjct: 79 VRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQ 138
Query: 95 ----------------HVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVK 138
H +S ++ K I + SAL YLH+ G I H D+K
Sbjct: 139 ICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIK 195
Query: 139 SANILLDDN--YTAKVADFASS---VLISSHDQTATTTKEIETVGWLDPEYLFWTE---- 189
N L N + K+ DF S +++ + TTK T ++ PE L T
Sbjct: 196 PENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYG 254
Query: 190 -KSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNFQVADEN 248
K D +S GV+L LL G P FP + +++ Q+LN ++ EN
Sbjct: 255 PKCDAWSAGVLLHLLLMGAVP-----------------FPGVNDADTISQVLNKKLCFEN 297
Query: 249 EMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSLRRLHENFWAQ 294
+++ LA L R V E+ D++R L + +Q
Sbjct: 298 --PNYNVLSPLARDLLSNL-----LNRNVDERFDAMRALQHPWISQ 336
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 96
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 97 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFEYL 152
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 153 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 204
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 205 ILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 122
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFEYL 178
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 179 HSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 230
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+ P G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+++D KV DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 33/229 (14%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKP------KMVDKILINEV-----FQH 54
+++D ++G G + V LV +KK K+V K L+N+ Q
Sbjct: 7 GLQDFDLLRVIGRGSYAKV--------LLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT 58
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI 113
+ + Q ++ + L C +T+ L V E+V G L H++ Q K + R
Sbjct: 59 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR----KLPEEHARF 114
Query: 114 -AAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
+AE + AL+YLH G II+ D+K N+LLD K+ D+ + TT+
Sbjct: 115 YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYG--MCKEGLRPGDTTSX 169
Query: 173 EIETVGWLDPEYLFWTEKS---DVYSFGVVLVELLTGKHPRSYVALASN 218
T ++ PE L + D ++ GV++ E++ G+ P V + N
Sbjct: 170 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 218
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Query: 82 LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSAN 141
V +++ G LF H++ + + + AAE ASAL YLHSL I++ D+K N
Sbjct: 116 FVLDYINGGELFYHLQRERCFLEPRARF---YAAEIASALGYLHSLN---IVYRDLKPEN 169
Query: 142 ILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGV 198
ILLD + DF + + + +TT+ T +L PE L + D + G
Sbjct: 170 ILLDSQGHIVLTDFG--LCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGA 227
Query: 199 VLVELLTGKHP 209
VL E+L G P
Sbjct: 228 VLYEMLYGLPP 238
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 37/254 (14%)
Query: 16 LGEGGFGFV--YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
LGEGGF +V +G L D A+K+ + + E Q + + NH N+++++
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKR-ILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 74 CLETKVP----LLVYEFVPNGTLFQHV-RYQSSQVLKTWKTCLRIAAETASALDYLHSLG 128
CL + L+ F GTL+ + R + T L + L+ +H+ G
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG 154
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE-------TVGWLD 181
H D+K NILL D + D S H + + ++ T+ +
Sbjct: 155 ---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 182 PE------YLFWTEKSDVYSFGVVLVELLTGKHPRSY-------VALA-SNEMTRMVPYF 227
PE + E++DV+S G VL ++ G+ P VALA N+++ +P
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS--IPQS 269
Query: 228 PYPIENNSLRQILN 241
P +++L Q+LN
Sbjct: 270 PR--HSSALWQLLN 281
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 18/156 (11%)
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ LV++ + G LF ++ + + K + +R E AL
Sbjct: 82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH 141
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
L+ I+H D+K NILLDD+ K+ DF S + ++ + T +L P
Sbjct: 142 KLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCG---TPSYLAP 192
Query: 183 EYL---------FWTEKSDVYSFGVVLVELLTGKHP 209
E + + ++ D++S GV++ LL G P
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 33/227 (14%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKP------KMVDKILINEV-----FQHKM 56
+++D ++G G + V LV +KK ++V K L+N+ Q +
Sbjct: 52 QDFDLLRVIGRGSYAKV--------LLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEK 103
Query: 57 RIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-A 114
+ Q ++ + L C +T+ L V E+V G L H++ Q K + R +
Sbjct: 104 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR----KLPEEHARFYS 159
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
AE + AL+YLH G II+ D+K N+LLD K+ D+ + TT+
Sbjct: 160 AEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYG--MCKEGLRPGDTTSTFC 214
Query: 175 ETVGWLDPEYLFWTEKS---DVYSFGVVLVELLTGKHPRSYVALASN 218
T ++ PE L + D ++ GV++ E++ G+ P V + N
Sbjct: 215 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 261
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 52/260 (20%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGVLPDNTL--VAVKK-PKMVDKILINEVFQHKMRIIS 60
V NY +HL+G G +G+VY NT VA+KK +M + ++ + ++ I++
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAY-DKNTEKNVAIKKVNRMFEDLIDCKRILREITILN 80
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASA 120
++ ++++ + +P + +F L+ + S + K +KT + + E
Sbjct: 81 RLKSDYIIRLYDLI----IPDDLLKF---DELYIVLEIADSDLKKLFKTPIFLTEEHIKT 133
Query: 121 L--------DYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATT-- 170
+ +++H G IIH D+K AN LL+ + + KV DF + I+S T
Sbjct: 134 ILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVND 190
Query: 171 ------------------TKEIETVGWLDPEYLF----WTEKSDVYSFGVVLVELLTGKH 208
T + T + PE + +T+ D++S G + ELL
Sbjct: 191 LEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNML- 249
Query: 209 PRSYVALASNEMTRMVPYFP 228
+S++ N+ T P FP
Sbjct: 250 -QSHI----NDPTNRFPLFP 264
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFAEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 102
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 158
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 159 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 48/230 (20%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNT-LVAVKKPKMVDK------ILINEVFQHKM-R 57
AT Y+ +G G +G VYK P + VA+K ++ + + I+ V + + R
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 58 IISQINHKNVVKILGVCL------ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTW---- 107
+ H NVV+++ VC E KV L+ F+HV Q L+T+
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLV----------FEHV----DQDLRTYLDKA 112
Query: 108 -------KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVL 160
+T + + LD+LH+ I+H D+K NIL+ T K+ADF + +
Sbjct: 113 PPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 169
Query: 161 ISSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
S T + T+ + PE L + D++S G + E+ K
Sbjct: 170 YSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 16 LGEGGFGFVYKGVLPD---NTLVAVK---KPKMVDKILINEVFQHKMRIISQINHKNVVK 69
+G G FG ++ D N LVAVK + + +D+ + E+ H+ + H N+V+
Sbjct: 27 IGSGNFGVAR--LMRDKQSNELVAVKYIERGEKIDENVKREIINHR-----SLRHPNIVR 79
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHV----RYQSSQVLKTWKTCLRIAAETASALDYLH 125
V L +V E+ G LF+ + R+ + ++ + S + Y H
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCH 132
Query: 126 SLGSPPIIHGDVKSANILLDDNYTA--KVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
++ + H D+K N LLD + K+ F S H Q T + T ++ PE
Sbjct: 133 AMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT---VGTPAYIAPE 186
Query: 184 YLFWTEK----SDVYSFGVVLVELLTGKHP 209
L E +DV+S GV L +L G +P
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 7 TKNYDKRHLLGEGGFGFVYKGVLPDN----TLVAVKKPKMVDKILINEVFQHK----MRI 58
++ Y LG G FGFV+ V + + +KK K+++ I + K + I
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 59 ISQINHKNVVKILGVCLETKVPLLVYEFVPNG-TLFQHVRYQS--SQVLKTWKTCLRIAA 115
+S++ H N++K+L + LV E +G LF + + L ++ I
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY-----IFR 137
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ SA+ YL IIH D+K NI++ +++T K+ DF S+ + T IE
Sbjct: 138 QLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIE 194
Query: 176 TVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHP 209
+ PE L + + +++S GV L L+ ++P
Sbjct: 195 ---YCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+ P G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+++D KV DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDK---ILINEVFQHKMRIISQINHKNVVKILG 72
+G+G +G V++G VAVK D+ E++ M + H+N++ +
Sbjct: 16 VGKGRYGEVWRGSWQGEN-VAVKIFSSRDEKSWFRETELYNTVM-----LRHENILGFIA 69
Query: 73 VCLETKVP----LLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH--- 125
+ ++ L+ + G+L+ +++ + + +CLRI AS L +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEI 125
Query: 126 --SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVL--ISSHDQTATTTKEIETVGWLD 181
+ G P I H D+KS NIL+ N +AD +V+ S++ + T ++
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 182 PEYLFWT---------EKSDVYSFGVVLVEL 203
PE L T ++ D+++FG+VL E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 55 KMRIISQINHKNVVKILGVCLETKV--PLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLR 112
++RI S H NV+ +LG C P L+ ++P G+L+ +V ++ + + ++
Sbjct: 60 RLRIFS---HPNVLPVLGACQSPPAPHPTLITHWMPYGSLY-NVLHEGTNFVVDQSQAVK 115
Query: 113 IAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
A + A + +LH+L P I + S ++++D++ TA+++ ++ + +
Sbjct: 116 FALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARIS-------MADVKFSFQSPG 167
Query: 173 EIETVGWLDPEYLFWTEK------SDVYSFGVVLVELLTGKHP 209
+ W+ PE L + +D++SF V+L EL+T + P
Sbjct: 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 9 NYDKRHLLGEGGFGFVYK-GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+++K LG G G V+K P ++A K + K I +++++ + N +
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQS---SQVLKTWKTCLRIAAETASALDYL 124
V G + E + G+L Q ++ Q+L +++ L YL
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------KVSIAVIKGLTYL 139
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE 183
I+H DVK +NIL++ K+ DF S LI S + T+ ++ PE
Sbjct: 140 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPE 192
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L ++ +SD++S G+ LVE+ G++P
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDK---ILINEVFQHKMRIISQINHKNVVKILG 72
+G+G +G V++G VAVK D+ E++ M + H+N++ +
Sbjct: 16 VGKGRYGEVWRGSWQGEN-VAVKIFSSRDEKSWFRETELYNTVM-----LRHENILGFIA 69
Query: 73 VCLETKVP----LLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH--- 125
+ ++ L+ + G+L+ +++ + + +CLRI AS L +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEI 125
Query: 126 --SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVL--ISSHDQTATTTKEIETVGWLD 181
+ G P I H D+KS NIL+ N +AD +V+ S++ + T ++
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 182 PEYLFWT---------EKSDVYSFGVVLVEL 203
PE L T ++ D+++FG+VL E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 48/222 (21%)
Query: 16 LGEGGFGFVYKGVLPD-NTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKI---- 70
LG GG G V+ V D + VA+KK + D + + +++II +++H N+VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALR-EIKIIRRLDHDNIVKVFEIL 77
Query: 71 ----------LGVCLETKVPLLVYEF--------VPNGTLFQ-HVRYQSSQVLKTWKTCL 111
+G E +V E+ + G L + H R Q+L+
Sbjct: 78 GPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLR------ 131
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTATT 170
L Y+HS ++H D+K AN+ ++ ++ K+ DF + ++ H
Sbjct: 132 --------GLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGH 180
Query: 171 TKEIETVGWL-DPEYLF----WTEKSDVYSFGVVLVELLTGK 207
E W P L +T+ D+++ G + E+LTGK
Sbjct: 181 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 111/258 (43%), Gaps = 52/258 (20%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPD-NTLVAVKKPKMVDKIL-INEVFQHKMRIISQINHK 65
+ Y+K +GEG +G V+K + + +VA+K+ ++ D + ++ ++ ++ HK
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 66 NVVKILGVCLETKVPLLVYEFVP----------NGTLFQHVRYQSSQVLKTWKTCLRIAA 115
N+V++ V K LV+EF NG L +++K++
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL-------DPEIVKSF------LF 108
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ L + HS ++H D+K N+L++ N K+ADF + + E+
Sbjct: 109 QLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGI--PVRCYSAEVV 163
Query: 176 TVGWLDPEYLF----WTEKSDVYSFGVVLVELLTGKHP------------RSYVALAS-- 217
T+ + P+ LF ++ D++S G + EL P R + L +
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPT 223
Query: 218 ----NEMTRMVPYFPYPI 231
MT++ Y PYP+
Sbjct: 224 EEQWPSMTKLPDYKPYPM 241
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ LV++ + G LF ++ + + K + +R E AL
Sbjct: 69 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH 128
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
L+ I+H D+K NILLDD+ K+ DF S + ++ T +L P
Sbjct: 129 KLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG---TPSYLAP 179
Query: 183 EYL---------FWTEKSDVYSFGVVLVELLTGKHP 209
E + + ++ D++S GV++ LL G P
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 9 NYDKRHLLGEGGFGFVYK-GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+++K LG G G V+K P ++A K + K I +++++ + N +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQS---SQVLKTWKTCLRIAAETASALDYL 124
V G + E + G+L Q ++ Q+L +++ L YL
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------KVSIAVIKGLTYL 147
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE 183
I+H DVK +NIL++ K+ DF S LI S + T+ ++ PE
Sbjct: 148 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPE 200
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L ++ +SD++S G+ LVE+ G++P
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+ P G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+++D KV DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++++ LV++ + G LF ++ + + K + +R E AL
Sbjct: 82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH 141
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDP 182
L+ I+H D+K NILLDD+ K+ DF S + ++ T +L P
Sbjct: 142 KLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG---TPSYLAP 192
Query: 183 EYL---------FWTEKSDVYSFGVVLVELLTGKHP 209
E + + ++ D++S GV++ LL G P
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPK--MVDKILINEVFQHKMRIISQINHKN 66
++D LLG+G FG V LV K KIL EV K + +
Sbjct: 9 DFDYLKLLGKGTFGKV--------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 67 VVK--------ILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
V++ L +T L V E+ G LF H+ S + + T + AE
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEI 117
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
SAL+YLHS +++ D+K N++LD + K+ DF + AT T
Sbjct: 118 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFG--LCKEGISDGATMKTFCGTP 172
Query: 178 GWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
+L PE L + D + GVV+ E++ G+ P
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 9 NYDKRHLLGEGGFGFVYK-GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+++K LG G G V+K P ++A K + K I +++++ + N +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQS---SQVLKTWKTCLRIAAETASALDYL 124
V G + E + G+L Q ++ Q+L +++ L YL
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------KVSIAVIKGLTYL 182
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE 183
I+H DVK +NIL++ K+ DF S LI S + T+ ++ PE
Sbjct: 183 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPE 235
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L ++ +SD++S G+ LVE+ G++P
Sbjct: 236 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDK---ILINEVFQHKMRIISQINHKNVVKILG 72
+G+G +G V++G VAVK D+ E++ M + H+N++ +
Sbjct: 45 VGKGRYGEVWRGSWQGEN-VAVKIFSSRDEKSWFRETELYNTVM-----LRHENILGFIA 98
Query: 73 VCLETKVP----LLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH--- 125
+ ++ L+ + G+L+ +++ + + +CLRI AS L +LH
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEI 154
Query: 126 --SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVL--ISSHDQTATTTKEIETVGWLD 181
+ G P I H D+KS NIL+ N +AD +V+ S++ + T ++
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 182 PEYLFWT---------EKSDVYSFGVVLVEL 203
PE L T ++ D+++FG+VL E+
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPK--MVDKILINEVFQHKMRIISQINHKN 66
++D LLG+G FG V LV K KIL EV K + +
Sbjct: 6 DFDYLKLLGKGTFGKV--------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 67 VVK--------ILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
V++ L +T L V E+ G LF H+ S + + T + AE
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEI 114
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
SAL+YLHS +++ D+K N++LD + K+ DF + AT T
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFG--LCKEGISDGATMKXFCGTP 169
Query: 178 GWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
+L PE L + D + GVV+ E++ G+ P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPK--MVDKILINEVFQHKMRIISQINHKN 66
++D LLG+G FG V LV K KIL EV K + +
Sbjct: 6 DFDYLKLLGKGTFGKV--------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 67 VVK--------ILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
V++ L +T L V E+ G LF H+ S + + T + AE
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEI 114
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
SAL+YLHS +++ D+K N++LD + K+ DF + AT T
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFG--LCKEGISDGATMKXFCGTP 169
Query: 178 GWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
+L PE L + D + GVV+ E++ G+ P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 9 NYDKRHLLGEGGFGFVYK-GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+++K LG G G V+K P ++A K + K I +++++ + N +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQS---SQVLKTWKTCLRIAAETASALDYL 124
V G + E + G+L Q ++ Q+L +++ L YL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------KVSIAVIKGLTYL 120
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE 183
I+H DVK +NIL++ K+ DF S LI S + T+ ++ PE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPE 173
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L ++ +SD++S G+ LVE+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 9 NYDKRHLLGEGGFGFVYK-GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+++K LG G G V+K P ++A K + K I +++++ + N +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQS---SQVLKTWKTCLRIAAETASALDYL 124
V G + E + G+L Q ++ Q+L +++ L YL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------KVSIAVIKGLTYL 120
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE 183
I+H DVK +NIL++ K+ DF S LI S + T+ ++ PE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPE 173
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L ++ +SD++S G+ LVE+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 27/212 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y +L N VA+KK + + N+ + + ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + QV++ R++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + T E+ T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMTPEVVTR 189
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
+ PE + + E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPK--MVDKILINEVFQHKMRIISQINHKN 66
++D LLG+G FG V LV K KIL EV K + +
Sbjct: 11 DFDYLKLLGKGTFGKV--------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 67 VVK--------ILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
V++ L +T L V E+ G LF H+ S + + T + AE
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEI 119
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
SAL+YLHS +++ D+K N++LD + K+ DF + AT T
Sbjct: 120 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFG--LCKEGISDGATMKXFCGTP 174
Query: 178 GWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
+L PE L + D + GVV+ E++ G+ P
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 6 ATKNYDKRHLLGEGGFGFVYKGVLPDNTL----VAVKKPKM------VDKILINEVFQHK 55
+ +N+ K +GEG +G VYK N L VA+KK ++ V I E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREI---- 56
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNG-TLFQHVRYQSSQVLKTWKTCLRIA 114
++ ++NH N+VK+L V LV+E V F + L K+ L
Sbjct: 57 -SLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYL--- 112
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
+ L + HS ++H D+K N+L++ K+ADF + T E+
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEV 167
Query: 175 ETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGK 207
T+ + PE L +++ D++S G + E++T +
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPK--MVDKILINEVFQHKMRIISQINHKN 66
++D LLG+G FG V LV K KIL EV K + +
Sbjct: 6 DFDYLKLLGKGTFGKV--------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 67 VVK--------ILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
V++ L +T L V E+ G LF H+ S + + T + AE
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEI 114
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
SAL+YLHS +++ D+K N++LD + K+ DF + AT T
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFG--LCKEGISDGATMKXFCGTP 169
Query: 178 GWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
+L PE L + D + GVV+ E++ G+ P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 127 LGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF 186
L S IH D+ + NILL +N K+ DF + I + + W+ PE +F
Sbjct: 215 LSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIF 274
Query: 187 ---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
++ KSDV+S+GV+L E+ + G P V + + +R LR+ +
Sbjct: 275 DKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSR-------------LREGMRM 321
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+ + + E +I+ C ERP ++ E+L L
Sbjct: 322 RAPEYSTPEIYQIML----DCWHRDPKERPRFAELVEKLGDL 359
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 16 LGEGGFGFVYKGVL------PDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + P VAVK K + +++I++ I H NVV
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 69 KILGVCLETKVPLLV-YEFVPNGTLFQHVR 97
+LG C + PL+V E+ G L +++
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLK 124
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 9 NYDKRHLLGEGGFGFVYK-GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+++K LG G G V+K P ++A K + K I +++++ + N +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQS---SQVLKTWKTCLRIAAETASALDYL 124
V G + E + G+L Q ++ Q+L +++ L YL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------KVSIAVIKGLTYL 120
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE 183
I+H DVK +NIL++ K+ DF S LI S + T+ ++ PE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPE 173
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L ++ +SD++S G+ LVE+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPK--MVDKILINEVFQHKMRIISQINHKN 66
++D LLG+G FG V LV K KIL EV K + +
Sbjct: 6 DFDYLKLLGKGTFGKV--------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 67 VVK--------ILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
V++ L +T L V E+ G LF H+ S + + T + AE
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEI 114
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
SAL+YLHS +++ D+K N++LD + K+ DF + AT T
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFG--LCKEGISDGATMKTFCGTP 169
Query: 178 GWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
+L PE L + D + GVV+ E++ G+ P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA-----LAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 9 NYDKRHLLGEGGFGFVYK-GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+++K LG G G V+K P ++A K + K I +++++ + N +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQS---SQVLKTWKTCLRIAAETASALDYL 124
V G + E + G+L Q ++ Q+L +++ L YL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------KVSIAVIKGLTYL 120
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE 183
I+H DVK +NIL++ K+ DF S LI S + T+ ++ PE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPE 173
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L ++ +SD++S G+ LVE+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 102
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+ K+ + +V E+ P G +F H+R ++ + + R AA+ +YL
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFEYL 158
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+++D KV DF + + T E +L PE
Sbjct: 159 HSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+++D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 IISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPK--MVDKILINEVFQHKMRIISQINHKN 66
++D LLG+G FG V LV K KIL EV K + +
Sbjct: 6 DFDYLKLLGKGTFGKV--------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 67 VVK--------ILGVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
V++ L +T L V E+ G LF H+ S + + T + AE
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEI 114
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
SAL+YLHS +++ D+K N++LD + K+ DF + AT T
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFG--LCKEGISDGATMKTFCGTP 169
Query: 178 GWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
+L PE L + D + GVV+ E++ G+ P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+ P G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+++D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 8 KNYDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDK-ILINEVFQHKMRI--ISQIN 63
K Y+ +G GGF V + +VA+K ++DK L +++ + K I + +
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIK---IMDKNTLGSDLPRIKTEIEALKNLR 66
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H+++ ++ V +V E+ P G LF ++ Q + + R + SA+ Y
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR---QIVSAVAY 123
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISS----HDQTATTTKEIETVGW 179
+HS G H D+K N+L D+ + K+ DF H QT ++ +
Sbjct: 124 VHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCG-----SLAY 175
Query: 180 LDPEYL----FWTEKSDVYSFGVVLVELLTGKHP 209
PE + + ++DV+S G++L L+ G P
Sbjct: 176 AAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 9 NYDKRHLLGEGGFGFVYK-GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
+++K LG G G V+K P ++A K + K I +++++ + N +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQS---SQVLKTWKTCLRIAAETASALDYL 124
V G + E + G+L Q ++ Q+L +++ L YL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------KVSIAVIKGLTYL 120
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLDPE 183
I+H DVK +NIL++ K+ DF S LI S + T+ ++ PE
Sbjct: 121 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPE 173
Query: 184 YL---FWTEKSDVYSFGVVLVELLTGKHP 209
L ++ +SD++S G+ LVE+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 102
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+ K+ + +V E+ P G +F H+R ++ + + R AA+ +YL
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 158
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+++D KV DF + + T E +L PE
Sbjct: 159 HSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK--------- 55
K Y +G G G V Y +L N VA+KK ++ FQ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK--------LSRPFQNQTHAKRAYRE 73
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
+ ++ +NHKN++ +L V K + EF + + + SQV++ R++
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 116 ---ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
+ + +LHS G IIH D+K +NI++ + T K+ DF L + + T
Sbjct: 131 LLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG---LARTAGTSFMMTP 184
Query: 173 EIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
+ T + PE + + E D++S GV++ E++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 24/217 (11%)
Query: 5 KATKNYDKRHLLGEGGFGFVYKGVLPDNT------LVAVKKPKMVDKILINEVFQHKMRI 58
+ T +Y LG+G F V + V T ++ KK D ++ + + RI
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARD----HQKLEREARI 83
Query: 59 ISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETA 118
+ H N+V++ E LV++ V G LF+ + + C+ E+
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILES- 142
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKEIE 175
++++H I+H D+K N+LL K+ADF ++ + Q
Sbjct: 143 --VNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA--G 195
Query: 176 TVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHP 209
T G+L PE L + + D+++ GV+L LL G P
Sbjct: 196 TPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 39/180 (21%)
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATT 170
+I T AL++L + IIH D+K +NILLD + K+ DF S L+ S
Sbjct: 129 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS----IAK 182
Query: 171 TKEIETVGWLDPEYL-------FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRM 223
T++ ++ PE + + +SDV+S G+ L EL TG+
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR---------------- 226
Query: 224 VPYFPYPIENNSLRQILNF------QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQV 277
FPYP N+ Q+ Q+++ E E + CL ++RP +++
Sbjct: 227 ---FPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 102
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+ K+ + +V E+ P G +F H+R ++ + + R AA+ +YL
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 158
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+++D KV DF + + T E +L PE
Sbjct: 159 HSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK--------- 55
K Y +G G G V Y +L N VA+KK ++ FQ++
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERN--VAIKK--------LSRPFQNQTHAKRAYRE 73
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
+ ++ +NHKN++ +L V K + EF + + + SQV++ R++
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 116 ---ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
+ + +LHS G IIH D+K +NI++ + T K+ DF L + + T
Sbjct: 131 LLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG---LARTAGTSFMMTP 184
Query: 173 EIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
+ T + PE + + E D++S GV++ E++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 117/271 (43%), Gaps = 38/271 (14%)
Query: 53 QHKMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLR 112
+ ++ I+ ++NH ++KI + + +V E + G LF V ++ LK TC
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKL 118
Query: 113 IAAETASALDYLHSLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTAT 169
+ A+ YLH G IIH D+K N+LL +++ K+ DF S ++ +T+
Sbjct: 119 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSL 172
Query: 170 TTKEIETVGWLDPEYLF------WTEKSDVYSFGVVLVELLTGKHP----RSYVALASNE 219
T +L PE L + D +S GV+L L+G P R+ V+L
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 220 MTRMVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSE 279
+ + P +V E + +++V KL + T +R
Sbjct: 233 TSGKYNFIP--------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
Query: 280 QLDSLRRLHENFWAQKN-SEETEQLLGESST 309
Q + ++R ++ +++N S Q+L + ST
Sbjct: 279 QDEDMKRKFQDLLSEENESTALPQVLAQPST 309
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+ P G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+++D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 49 NEVFQHKMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWK 108
++ + + RI + H N+V++ E LV++ V G LF+ + +
Sbjct: 47 HQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS 106
Query: 109 TCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA---KVADFASSVLISSHD 165
C++ + A+ + H +G ++H D+K N+LL K+ADF ++ +
Sbjct: 107 HCIQ---QILEAVLHCHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ 160
Query: 166 QTATTTKEIETVGWLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
Q T G+L PE L + + D+++ GV+L LL G P
Sbjct: 161 QAWFGFA--GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 31/257 (12%)
Query: 15 LLGEGGFGFVYKG-VLPDNTLVAVKK-PK--------MVDKILINEVFQHKMRIISQINH 64
LLG+GGFG V+ G L D VA+K P+ + D + ++ + H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 65 KNVVKILGVCLETKVPLLVYEF-VPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
V+++L + +LV E +P LF ++ + + + C + +A+ +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT-EKGPLGEGPSRCF--FGQVVAAIQH 154
Query: 124 LHSLGSPPIIHGDVKSANILLD-DNYTAKVADFASSVLISSHDQTAT---TTKEIETVGW 179
HS G ++H D+K NIL+D AK+ DF S L+ HD+ T T+ W
Sbjct: 155 CHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL--HDEPYTDFDGTRVYSPPEW 209
Query: 180 LDPEYLFWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNS---L 236
+ + + + V+S G++L +++ G P E+ +FP + + +
Sbjct: 210 IS-RHQYHALPATVWSLGILLYDMVCGDIPFER----DQEILEAELHFPAHVSPDCCALI 264
Query: 237 RQILNFQVADENEMEEI 253
R+ L + + +EEI
Sbjct: 265 RRCLAPKPSSRPSLEEI 281
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 38/269 (14%)
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
++ I+ ++NH ++KI + + +V E + G LF V ++ LK TC
Sbjct: 64 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKLYF 119
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTT 171
+ A+ YLH G IIH D+K N+LL +++ K+ DF S ++ +T+
Sbjct: 120 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMR 173
Query: 172 KEIETVGWLDPEYLF------WTEKSDVYSFGVVLVELLTGKHP----RSYVALASNEMT 221
T +L PE L + D +S GV+L L+G P R+ V+L +
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 233
Query: 222 RMVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQL 281
+ P +V E + +++V KL + T +R Q
Sbjct: 234 GKYNFIP--------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
Query: 282 DSLRRLHENFWAQKN-SEETEQLLGESST 309
+ ++R ++ +++N S Q+L + ST
Sbjct: 280 EDMKRKFQDLLSEENESTALPQVLAQPST 308
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 38/269 (14%)
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
++ I+ ++NH ++KI + + +V E + G LF V ++ LK TC
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKLYF 120
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTT 171
+ A+ YLH G IIH D+K N+LL +++ K+ DF S ++ +T+
Sbjct: 121 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMR 174
Query: 172 KEIETVGWLDPEYLF------WTEKSDVYSFGVVLVELLTGKHP----RSYVALASNEMT 221
T +L PE L + D +S GV+L L+G P R+ V+L +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 222 RMVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQL 281
+ P +V E + +++V KL + T +R Q
Sbjct: 235 GKYNFIP--------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
Query: 282 DSLRRLHENFWAQKN-SEETEQLLGESST 309
+ ++R ++ +++N S Q+L + ST
Sbjct: 281 EDMKRKFQDLLSEENESTALPQVLAQPST 309
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 38/269 (14%)
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
++ I+ ++NH ++KI + + +V E + G LF V ++ LK TC
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKLYF 120
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTT 171
+ A+ YLH G IIH D+K N+LL +++ K+ DF S ++ +T+
Sbjct: 121 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMR 174
Query: 172 KEIETVGWLDPEYLF------WTEKSDVYSFGVVLVELLTGKHP----RSYVALASNEMT 221
T +L PE L + D +S GV+L L+G P R+ V+L +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 222 RMVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQL 281
+ P +V E + +++V KL + T +R Q
Sbjct: 235 GKYNFIP--------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
Query: 282 DSLRRLHENFWAQKN-SEETEQLLGESST 309
+ ++R ++ +++N S Q+L + ST
Sbjct: 281 EDMKRKFQDLLSEENESTAKPQVLAQPST 309
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 38/269 (14%)
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
++ I+ ++NH ++KI + + +V E + G LF V ++ LK TC
Sbjct: 71 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKLYF 126
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTT 171
+ A+ YLH G IIH D+K N+LL +++ K+ DF S ++ +T+
Sbjct: 127 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMR 180
Query: 172 KEIETVGWLDPEYLF------WTEKSDVYSFGVVLVELLTGKHP----RSYVALASNEMT 221
T +L PE L + D +S GV+L L+G P R+ V+L +
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 240
Query: 222 RMVPYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQL 281
+ P +V E + +++V KL + T +R Q
Sbjct: 241 GKYNFIP--------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
Query: 282 DSLRRLHENFWAQKN-SEETEQLLGESST 309
+ ++R ++ +++N S Q+L + ST
Sbjct: 287 EDMKRKFQDLLSEENESTALPQVLAQPST 315
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
++ I+ ++NH ++KI + + +V E + G LF V ++ LK TC
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKLYF 245
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTT 171
+ A+ YLH G IIH D+K N+LL +++ K+ DF S ++ +T+
Sbjct: 246 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMR 299
Query: 172 KEIETVGWLDPEYLF------WTEKSDVYSFGVVLVELLTGKHPRS 211
T +L PE L + D +S GV+L L+G P S
Sbjct: 300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGVC 74
LG G + VYKG+ VA+K+ K+ + ++ ++ ++ H+N+V++ V
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 75 LETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG---SPP 131
LV+EF+ N +Y S+ + L + L L
Sbjct: 73 HTENKLTLVFEFMDNDL----KKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK 128
Query: 132 IIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF----W 187
I+H D+K N+L++ K+ DF + T + E+ T+ + P+ L +
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGI--PVNTFSSEVVTLWYRAPDVLMGSRTY 186
Query: 188 TEKSDVYSFGVVLVELLTGK 207
+ D++S G +L E++TGK
Sbjct: 187 STSIDIWSCGCILAEMITGK 206
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFV----YKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+D+ LG G FG V +K + + K K+V I K RI+ +N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L P
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPAI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 27/212 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y +L N VA+KK + + N+ + + ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + SQV++ R++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + T + T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMTPYVVTR 189
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
+ PE + + E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA 114
++ I+ ++NH ++KI + + +V E + G LF V ++ LK TC
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV--VGNKRLKE-ATCKLYF 259
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTT 171
+ A+ YLH G IIH D+K N+LL +++ K+ DF S ++ +T+
Sbjct: 260 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMR 313
Query: 172 KEIETVGWLDPEYLF------WTEKSDVYSFGVVLVELLTGKHPRS 211
T +L PE L + D +S GV+L L+G P S
Sbjct: 314 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 359
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 132 IIHGDVKSANILLDDNYTAKVADFASS---VLISSHDQTATTTKEI--ETVGWLDPEYLF 186
+IH DVK +NILLD+ K+ DF S V + D++A + E + DP
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPD 205
Query: 187 WTEKSDVYSFGVVLVELLTGKHP 209
+ ++DV+S G+ LVEL TG+ P
Sbjct: 206 YDIRADVWSLGISLVELATGQFP 228
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 52/258 (20%)
Query: 8 KNYDKRHLLGEGGFGFVYKGVLPD-NTLVAVKKPKMVDKI-LINEVFQHKMRIISQINHK 65
+ Y+K +GEG +G V+K + + +VA+K+ ++ D + ++ ++ ++ HK
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 66 NVVKILGVCLETKVPLLVYEFVP----------NGTLFQHVRYQSSQVLKTWKTCLRIAA 115
N+V++ V K LV+EF NG L +++K++
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL-------DPEIVKSF------LF 108
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIE 175
+ L + HS ++H D+K N+L++ N K+A+F + + E+
Sbjct: 109 QLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGI--PVRCYSAEVV 163
Query: 176 TVGWLDPEYLF----WTEKSDVYSFGVVLVELLTGKHP------------RSYVALAS-- 217
T+ + P+ LF ++ D++S G + EL P R + L +
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223
Query: 218 ----NEMTRMVPYFPYPI 231
MT++ Y PYP+
Sbjct: 224 EEQWPSMTKLPDYKPYPM 241
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 7 TKNYDKRHLLGEGGFGFVYKGV-LPDN-----TLVAVKKPKMVDKILINEVFQHKMRIIS 60
T Y LG+G F V + + +P ++ KK D ++ + + RI
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD----HQKLEREARICR 58
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASA 120
+ H N+V++ E LV++ V G LF+ + + C++ E+
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILES--- 115
Query: 121 LDYLHSLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+++ H G I+H D+K N+LL K+ADF ++ + Q T
Sbjct: 116 VNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTP 170
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHP 209
G+L PE L + + D+++ GV+L LL G P
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 10 YDKRHLLGEGGFGFVY--KGVLPDN--TLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+++ LG G FG V K + N + + K K+V I K RI+ +N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFP 101
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAETASALDYL 124
+VK+ + +V E+V G +F H+R ++ + + R AA+ +YL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
HSL +I+ D+K N+L+D +V DF + + T E +L PE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 185 LF---WTEKSDVYSFGVVLVELLTGKHP 209
+ + + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 27/212 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y +L N VA+KK + + N+ + + ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + SQV++ R++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + T + T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG---LARTAGTSFMMTPYVVTR 189
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
+ PE + + E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 82 LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSAN 141
V E+ G LF H+ S + + + AE SALDYLHS +++ D+K N
Sbjct: 228 FVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLEN 282
Query: 142 ILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL---FWTEKSDVYSFGV 198
++LD + K+ DF + AT T +L PE L + D + GV
Sbjct: 283 LMLDKDGHIKITDFG--LCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 340
Query: 199 VLVELLTGKHP 209
V+ E++ G+ P
Sbjct: 341 VMYEMMCGRLP 351
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 82 LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSAN 141
V E+ G LF H+ S + + + AE SALDYLHS +++ D+K N
Sbjct: 87 FVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLEN 141
Query: 142 ILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL---FWTEKSDVYSFGV 198
++LD + K+ DF + AT T +L PE L + D + GV
Sbjct: 142 LMLDKDGHIKITDFG--LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 199
Query: 199 VLVELLTGKHP 209
V+ E++ G+ P
Sbjct: 200 VMYEMMCGRLP 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 82 LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSAN 141
V E+ G LF H+ S + + + AE SALDYLHS +++ D+K N
Sbjct: 85 FVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLEN 139
Query: 142 ILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL---FWTEKSDVYSFGV 198
++LD + K+ DF + AT T +L PE L + D + GV
Sbjct: 140 LMLDKDGHIKITDFG--LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 197
Query: 199 VLVELLTGKHP 209
V+ E++ G+ P
Sbjct: 198 VMYEMMCGRLP 208
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 34/209 (16%)
Query: 16 LGEGGFGFVYKGVLPDNTL---VAVKKPKMVDKILINEVFQ-HKMRIISQINHKNVVKIL 71
LG G FG V++ + D AVKK ++ EVF+ ++ + + +V +
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVRL-------EVFRAEELMACAGLTSPRIVPLY 132
Query: 72 GVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPP 131
G E + E + G+L Q V+ Q L + L+YLHS
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCL---PEDRALYYLGQALEGLEYLHSRR--- 186
Query: 132 IIHGDVKSANILL-DDNYTAKVADFASSVLISSHDQTATTTKEIETVGW-------LDPE 183
I+HGDVK+ N+LL D A + DF +V + Q K++ T + + PE
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCL----QPDGLGKDLLTGDYIPGTETHMAPE 242
Query: 184 YLFWTE---KSDVYSFGVVLVELLTGKHP 209
+ K DV+S +++ +L G HP
Sbjct: 243 VVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 82 LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSAN 141
V E+ G LF H+ S + + + AE SALDYLHS +++ D+K N
Sbjct: 86 FVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLEN 140
Query: 142 ILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL---FWTEKSDVYSFGV 198
++LD + K+ DF + AT T +L PE L + D + GV
Sbjct: 141 LMLDKDGHIKITDFG--LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 198
Query: 199 VLVELLTGKHP 209
V+ E++ G+ P
Sbjct: 199 VMYEMMCGRLP 209
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 82 LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSAN 141
V E+ G LF H+ S + + + AE SALDYLHS +++ D+K N
Sbjct: 225 FVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLEN 279
Query: 142 ILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL---FWTEKSDVYSFGV 198
++LD + K+ DF + AT T +L PE L + D + GV
Sbjct: 280 LMLDKDGHIKITDFG--LCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 337
Query: 199 VLVELLTGKHP 209
V+ E++ G+ P
Sbjct: 338 VMYEMMCGRLP 348
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 7 TKNYDKRHLLGEGGFGFVYKGV-LPDNT-----LVAVKKPKMVDKILINEVFQHKMRIIS 60
T Y LG+G F V + + +P ++ KK D ++ + + RI
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD----HQKLEREARICR 58
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASA 120
+ H N+V++ E LV++ V G LF+ + + C++ E+
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILES--- 115
Query: 121 LDYLHSLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+++ H G I+H D+K N+LL K+ADF ++ + Q T
Sbjct: 116 VNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTP 170
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHP 209
G+L PE L + + D+++ GV+L LL G P
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 27/212 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y +L N VA+KK + + N+ + + ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + SQV++ R++ +
Sbjct: 79 VVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + T + T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG---LARTAGTSFMMTPYVVTR 189
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
+ PE + + E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 20/138 (14%)
Query: 82 LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHS-----LGSPPIIHGD 136
L+ ++ NG+L+ +++ S L K+ L++A + S L +LH+ G P I H D
Sbjct: 112 LITDYHENGSLYDYLK---STTLDA-KSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRD 167
Query: 137 VKSANILLDDNYTAKVADFASSV-LISSHDQT-ATTTKEIETVGWLDPEYL--------F 186
+KS NIL+ N T +AD +V IS ++ + T ++ PE L F
Sbjct: 168 LKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHF 227
Query: 187 WTE-KSDVYSFGVVLVEL 203
+ +D+YSFG++L E+
Sbjct: 228 QSYIMADMYSFGLILWEV 245
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 36/219 (16%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQ----HKMRIISQINH 64
Y+K +G+G FG V+K VA+KK M ++ E F +++I+ + H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---KEGFPITALREIKILQLLKH 76
Query: 65 KNVVKILGVCLETKVPL--------LVYEFVPN--GTLFQHV--RYQSSQVLKTWKTCLR 112
+NVV ++ +C P LV++F + L +V ++ S++ + + L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL- 135
Query: 113 IAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATT 170
+ L Y+H I+H D+K+AN+L+ + K+ADF A + ++ + Q
Sbjct: 136 ------NGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 171 TKEIETVGWLDPEYLF----WTEKSDVYSFGVVLVELLT 205
+ T+ + PE L + D++ G ++ E+ T
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPDNTLVAVKK----PKMVDKILINEVFQHKMRIISQINHK 65
YD LG G FG V++ V V V K P +DK + ++++ I++Q++H
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV----KNEISIMNQLHHP 108
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH 125
++ + + +L+ EF+ G LF + + ++ + + + L ++H
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEA--EVINYMRQACEGLKHMH 166
Query: 126 SLGSPPIIHGDVKSANILLDDNYTA--KVADFASSVLISSHD--QTATTTKEIETVGWLD 181
I+H D+K NI+ + + K+ DF + ++ + + T T E +D
Sbjct: 167 EHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD 223
Query: 182 PEYL-FWTEKSDVYSFGVVLVELLTGKHP 209
E + F+T D+++ GV+ LL+G P
Sbjct: 224 REPVGFYT---DMWAIGVLGYVLLSGLSP 249
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 30/170 (17%)
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATT 170
+IA AL++LHS S +IH DVK +N+L++ K+ DF S L+ S +T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 171 -TKEIETVGWLDPEY--LFWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMV--- 224
K ++PE ++ KSD++S G+ ++EL + P ++ ++V
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 274
Query: 225 -PYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPT 273
P P AD+ E ++ S+CL+ + ERPT
Sbjct: 275 SPQLP----------------ADKFSAEFVD----FTSQCLKKNSKERPT 304
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 9 NYDKRHLLGEGGFGFVYK-GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNV 67
++++ LG G G V K P ++A K + K I +++++ + N +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCL-----RIAAETASALD 122
V G + E + G+L QVLK K +++ L
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSL--------DQVLKEAKRIPEEILGKVSIAVLRGLA 128
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISSHDQTATTTKEIETVGWLD 181
YL I+H DVK +NIL++ K+ DF S LI S + T+ ++
Sbjct: 129 YLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMA 181
Query: 182 PEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
PE L ++ +SD++S G+ LVEL G++P
Sbjct: 182 PERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 50/233 (21%)
Query: 3 LVKATKNYDKRHLLGEGGFGFVYKGVLPDN--TLVAVKKPKM------VDKILINEVFQH 54
L +A + Y+ +GEG +G V+K N VA+K+ ++ + I EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV--A 63
Query: 55 KMRIISQINHKNVVKILGVCL------ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTW- 107
+R + H NVV++ VC ETK+ L+ F+HV Q L T+
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLV----------FEHV----DQDLTTYL 109
Query: 108 ----------KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFAS 157
+T + + LD+LHS ++H D+K NIL+ + K+ADF
Sbjct: 110 DKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 166
Query: 158 SVLISSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ + S Q A T+ + T+ + PE L + D++S G + E+ K
Sbjct: 167 ARIYSF--QMALTSV-VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 27/212 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y +L N VA+KK + + N+ + + ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + SQV++ R++ +
Sbjct: 79 VVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + T + T
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG---LARTAGTSFMMTPYVVTR 189
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
+ PE + + E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 33/232 (14%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPD-NTLVAVK-------KPKMVDKILINEVFQHKMRIIS 60
++ ++G GGFG VY D + A+K K K + + +NE ++S
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI-----MLS 243
Query: 61 QINHKNVVKILGVCLETKVP---LLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++ + I+ + P + + + G L H+ SQ + +R AAE
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAE 299
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
L+++H+ +++ D+K ANILLD++ +++D + S A+ + T
Sbjct: 300 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGT 352
Query: 177 VGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHP-RSYVALASNEMTRM 223
G++ PE L + +D +S G +L +LL G P R + +E+ RM
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 404
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 33/232 (14%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPD-NTLVAVK-------KPKMVDKILINEVFQHKMRIIS 60
++ ++G GGFG VY D + A+K K K + + +NE ++S
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI-----MLS 244
Query: 61 QINHKNVVKILGVCLETKVP---LLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRI-AAE 116
++ + I+ + P + + + G L H+ SQ + +R AAE
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAE 300
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
L+++H+ +++ D+K ANILLD++ +++D + S A+ + T
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGT 353
Query: 177 VGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHP-RSYVALASNEMTRM 223
G++ PE L + +D +S G +L +LL G P R + +E+ RM
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 405
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 129
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ T +
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPAF 183
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
+ PE + + ++D++S GV+ LL+G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 50/233 (21%)
Query: 3 LVKATKNYDKRHLLGEGGFGFVYKGVLPDN--TLVAVKKPKM------VDKILINEVFQH 54
L +A + Y+ +GEG +G V+K N VA+K+ ++ + I EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV--A 63
Query: 55 KMRIISQINHKNVVKILGVCL------ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTW- 107
+R + H NVV++ VC ETK+ L+ F+HV Q L T+
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLV----------FEHV----DQDLTTYL 109
Query: 108 ----------KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFAS 157
+T + + LD+LHS ++H D+K NIL+ + K+ADF
Sbjct: 110 DKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 166
Query: 158 SVLISSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ + S Q A T+ + T+ + PE L + D++S G + E+ K
Sbjct: 167 ARIYSF--QMALTSV-VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 16 LGEGGFGFVYKGVLPDNTL---VAVKKPKMVDKILINEVFQ-HKMRIISQINHKNVVKIL 71
LG G FG V++ + D AVKK ++ EVF+ ++ + + +V +
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVRL-------EVFRAEELMACAGLTSPRIVPLY 151
Query: 72 GVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPP 131
G E + E + G+L Q V+ Q L + L+YLHS
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCL---PEDRALYYLGQALEGLEYLHSRR--- 205
Query: 132 IIHGDVKSANILL-DDNYTAKVADFASSVLISSH--DQTATTTKEIE-TVGWLDPEYLFW 187
I+HGDVK+ N+LL D A + DF +V + ++ T I T + PE +
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 188 TE---KSDVYSFGVVLVELLTGKHP 209
K DV+S +++ +L G HP
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 16 LGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVK 69
LG+G F V + G ++ KK D ++ + + RI + H N+V+
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARD----HQKLEREARICRLLKHPNIVR 85
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
+ E L+++ V G LF+ + + C++ + A+ + H +G
Sbjct: 86 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ---QILEAVLHCHQMG- 141
Query: 130 PPIIHGDVKSANILLDDNYTA---KVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF 186
++H D+K N+LL K+ADF ++ + Q T G+L PE L
Sbjct: 142 --VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLR 197
Query: 187 ---WTEKSDVYSFGVVLVELLTGKHP 209
+ + D+++ GV+L LL G P
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 36/219 (16%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQ----HKMRIISQINH 64
Y+K +G+G FG V+K VA+KK M ++ E F +++I+ + H
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---KEGFPITALREIKILQLLKH 75
Query: 65 KNVVKILGVCLETKVPL--------LVYEFVPN--GTLFQHV--RYQSSQVLKTWKTCLR 112
+NVV ++ +C P LV++F + L +V ++ S++ + + L
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL- 134
Query: 113 IAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATT 170
+ L Y+H I+H D+K+AN+L+ + K+ADF A + ++ + Q
Sbjct: 135 ------NGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 171 TKEIETVGWLDPEYLF----WTEKSDVYSFGVVLVELLT 205
+ T+ + PE L + D++ G ++ E+ T
Sbjct: 186 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 31/231 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPD-NTLVAVK-------KPKMVDKILINEVFQHKMRIIS 60
++ ++G GGFG VY D + A+K K K + + +NE ++S
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI-----MLS 244
Query: 61 QINHKNVVKILGVCLETKVP---LLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ + I+ + P + + + G L H+ S + + AAE
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL---SQHGVFSEADMRFYAAEI 301
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L+++H+ +++ D+K ANILLD++ +++D + S A+ + T
Sbjct: 302 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTH 354
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHP-RSYVALASNEMTRM 223
G++ PE L + +D +S G +L +LL G P R + +E+ RM
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 405
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 31/231 (13%)
Query: 9 NYDKRHLLGEGGFGFVYKGVLPD-NTLVAVK-------KPKMVDKILINEVFQHKMRIIS 60
++ ++G GGFG VY D + A+K K K + + +NE ++S
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI-----MLS 244
Query: 61 QINHKNVVKILGVCLETKVP---LLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAET 117
++ + I+ + P + + + G L H+ S + + AAE
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL---SQHGVFSEADMRFYAAEI 301
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
L+++H+ +++ D+K ANILLD++ +++D + S A+ + T
Sbjct: 302 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTH 354
Query: 178 GWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHP-RSYVALASNEMTRM 223
G++ PE L + +D +S G +L +LL G P R + +E+ RM
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 405
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 43/218 (19%)
Query: 16 LGEGGFGFVYKGVLP-DNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VA+KK P D + + +++I+ H N++ I +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 74 CLETKVPLLVYEFV-----------------PNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
L VP ++ V +HVRY Q+L+
Sbjct: 123 -LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR----------- 170
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATTTKEI 174
L Y+HS +IH D+K +N+L+++N K+ DF A + S + T+ +
Sbjct: 171 ---GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 224
Query: 175 ETVGWLDPEYLF----WTEKSDVYSFGVVLVELLTGKH 208
T + PE + +T+ D++S G + E+L +
Sbjct: 225 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 36/219 (16%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQ----HKMRIISQINH 64
Y+K +G+G FG V+K VA+KK M ++ E F +++I+ + H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---KEGFPITALREIKILQLLKH 76
Query: 65 KNVVKILGVCLETKVPL--------LVYEFVPN--GTLFQHV--RYQSSQVLKTWKTCLR 112
+NVV ++ +C P LV++F + L +V ++ S++ + + L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL- 135
Query: 113 IAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATT 170
+ L Y+H I+H D+K+AN+L+ + K+ADF A + ++ + Q
Sbjct: 136 ------NGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 171 TKEIETVGWLDPEYLF----WTEKSDVYSFGVVLVELLT 205
+ T+ + PE L + D++ G ++ E+ T
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 12 KRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKIL 71
K +LG G FG V+K L K + E ++++ +++Q++H N++++
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLY 152
Query: 72 GVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPP 131
+LV E+V G LF + +S + T + + + ++H +
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNL--TELDTILFMKQICEGIRHMHQM---Y 207
Query: 132 IIHGDVKSANILL--DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE---YLF 186
I+H D+K NIL D K+ DF L + T +L PE Y F
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFG---LARRYKPREKLKVNFGTPEFLAPEVVNYDF 264
Query: 187 WTEKSDVYSFGVVLVELLTGKHP 209
+ +D++S GV+ LL+G P
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 36/219 (16%)
Query: 10 YDKRHLLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQ----HKMRIISQINH 64
Y+K +G+G FG V+K VA+KK M ++ E F +++I+ + H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---KEGFPITALREIKILQLLKH 76
Query: 65 KNVVKILGVCLETKVPL--------LVYEFVPN--GTLFQHV--RYQSSQVLKTWKTCLR 112
+NVV ++ +C P LV++F + L +V ++ S++ + + L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL- 135
Query: 113 IAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATT 170
+ L Y+H I+H D+K+AN+L+ + K+ADF A + ++ + Q
Sbjct: 136 ------NGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 171 TKEIETVGWLDPEYLF----WTEKSDVYSFGVVLVELLT 205
+ T+ + PE L + D++ G ++ E+ T
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 50/233 (21%)
Query: 3 LVKATKNYDKRHLLGEGGFGFVYKGVLPDN--TLVAVKKPKM------VDKILINEVFQH 54
L +A + Y+ +GEG +G V+K N VA+K+ ++ + I EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV--A 63
Query: 55 KMRIISQINHKNVVKILGVCL------ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTW- 107
+R + H NVV++ VC ETK+ L+ F+HV Q L T+
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLV----------FEHV----DQDLTTYL 109
Query: 108 ----------KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFAS 157
+T + + LD+LHS ++H D+K NIL+ + K+ADF
Sbjct: 110 DKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 166
Query: 158 SVLISSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ + S Q A T+ + T+ + PE L + D++S G + E+ K
Sbjct: 167 ARIYSF--QMALTSV-VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHK----MRIISQINHKNVVKI 70
+G G +G V + VA+KK + + +E+F + + ++ + H+NV+ +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKK---LSRPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
Query: 71 LGVCLETKVPLLVYEF---VPNGTLFQHVRYQSSQVLKTWKTCLR-IAAETASALDYLHS 126
L V Y+F +P F Q LK + ++ + + L Y+HS
Sbjct: 89 LDVFTPASSLRNFYDFYLVMP----FMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS 144
Query: 127 LGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE--- 183
G ++H D+K N+ ++++ K+ DF ++ H A T + T + PE
Sbjct: 145 AG---VVHRDLKPGNLAVNEDCELKILDFG----LARH-ADAEMTGYVVTRWYRAPEVIL 196
Query: 184 -YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ E+LTGK
Sbjct: 197 SWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y +L N VA+KK + + N+ + + ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + QV++ R++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + T + T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMTPYVVTR 189
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
+ PE + + E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 129
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ E V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA- 185
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 186 --PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIISQINHKNVVKIL 71
+G G +G V V D A K + + +E+F + +R++ + H+NV+ +L
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 72 GVCLETKVP------LLVYEFVPN--GTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
V + LV F+ G L +H + ++ + + L Y
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQ-------FLVYQMLKGLRY 143
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
+H+ G IIH D+K N+ ++++ K+ DF + S T+ PE
Sbjct: 144 IHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRA-----PE 195
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ +T+ D++S G ++ E++TGK
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKM------VDKILINEVFQHKMRIISQINHKNVVK 69
+GEG +G VYK A+KK ++ + I E+ I+ ++ H N+VK
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREI-----SILKELKHSNIVK 64
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG- 128
+ V K +LV F+H+ ++L + L + L L+ +
Sbjct: 65 LYDVIHTKKRLVLV---------FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 129 --SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF 186
++H D+K N+L++ K+ADF + T EI T+ + P+ L
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI--PVRKYTHEIVTLWYRAPDVLM 173
Query: 187 WTEKS----DVYSFGVVLVELLTG 206
++K D++S G + E++ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 43/217 (19%)
Query: 16 LGEGGFGFVYKGVLP-DNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VA+KK P D + + +++I+ H N++ I +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 74 CLETKVPLLVYEFV-----------------PNGTLFQHVRYQSSQVLKTWKTCLRIAAE 116
L VP ++ V +HVRY Q+L+
Sbjct: 122 -LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR----------- 169
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATTTKEI 174
L Y+HS +IH D+K +N+L+++N K+ DF A + S + T+ +
Sbjct: 170 ---GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 223
Query: 175 ETVGWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
T + PE + +T+ D++S G + E+L +
Sbjct: 224 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 18/209 (8%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEV--FQHKMRIISQINHKNV 67
Y + +G G +G V V + + K + K + +V F+ ++ I+ ++H N+
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIR--RAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 85
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
+++ + LV E G LF+ V ++ +V + RI + SA+ Y H L
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELFERVVHK--RVFRE-SDAARIMKDVLSAVAYCHKL 142
Query: 128 GSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
+ H D+K N L + K+ DF + T ++ T ++ P+
Sbjct: 143 N---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT---KVGTPYYVSPQV 196
Query: 185 L--FWTEKSDVYSFGVVLVELLTGKHPRS 211
L + + D +S GV++ LL G P S
Sbjct: 197 LEGLYGPECDEWSAGVMMYVLLCGYPPFS 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y +L N VA+KK + + N+ + + ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + QV++ R++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + T + T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMTPYVVTR 189
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
+ PE + + E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 129
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ E V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA- 185
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 186 --PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 49/224 (21%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y VL N VA+KK + + N+ + + ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAE-- 116
+NHKN++ +L V F P TL FQ V Y +++ C I E
Sbjct: 79 XVNHKNIISLLNV------------FTPQKTLEEFQDV-YLVMELMDA-NLCQVIQMELD 124
Query: 117 ----------TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ +LHS G IIH D+K +NI++ + T K+ DF L +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG---LARTAGT 178
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ T + T + PE + + E D++S G ++ E++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILI-----NEVFQHKMRIISQINHKNVVK 69
LG+GGF ++ + D V K+V K L+ E ++ I + H++VV
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
G + +V E +L + + + + + LR + YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRNR- 137
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE 189
+IH D+K N+ L+++ K+ DF + + + T T ++ PE L
Sbjct: 138 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL--CGTPNYIAPEVLSKKG 193
Query: 190 KS---DVYSFGVVLVELLTGKHP-------RSYVALASNEMTRMVPYFPYPIENNSLRQI 239
S DV+S G ++ LL GK P +Y+ + NE + +P P
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINP--------- 242
Query: 240 LNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQV 277
+ A L K L+T T RPT+ ++
Sbjct: 243 ---------------VAASLIQKMLQTDPTARPTINEL 265
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 129
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ E V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA- 185
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 186 --PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 18/209 (8%)
Query: 10 YDKRHLLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEV--FQHKMRIISQINHKNV 67
Y + +G G +G V V + + K + K + +V F+ ++ I+ ++H N+
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIR--RAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 68 VKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSL 127
+++ + LV E G LF+ V ++ +V + RI + SA+ Y H L
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERVVHK--RVFRE-SDAARIMKDVLSAVAYCHKL 125
Query: 128 GSPPIIHGDVKSANILL---DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEY 184
+ H D+K N L + K+ DF + T ++ T ++ P+
Sbjct: 126 N---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT---KVGTPYYVSPQV 179
Query: 185 L--FWTEKSDVYSFGVVLVELLTGKHPRS 211
L + + D +S GV++ LL G P S
Sbjct: 180 LEGLYGPECDEWSAGVMMYVLLCGYPPFS 208
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
AE A+D +H L +H D+K NIL+D N ++ADF S + + D T ++ +
Sbjct: 182 AEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLME-DGTVQSSVAV 237
Query: 175 ETVGWLDPEYLFWTE--------KSDVYSFGVVLVELLTGKHP 209
T ++ PE L E + D +S GV + E+L G+ P
Sbjct: 238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 129
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ E V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA- 185
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 186 --PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y +L N VA+KK + + N+ + + ++
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 79
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + QV++ R++ +
Sbjct: 80 CVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + T + T
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMTPYVVTR 190
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
+ PE + + E D++S G ++ E++ G
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 128
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ E V
Sbjct: 129 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA- 184
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 185 --PEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 129
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ E V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA- 185
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 186 --PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 37/218 (16%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK--------- 55
K Y +G G G V Y VL N VA+KK ++ FQ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK--------LSRPFQNQTHAKRAYRE 73
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA 115
+ ++ +NHKN++ +L V K + EF + + + QV++ R++
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSY 130
Query: 116 ---ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
+ + +LHS G IIH D+K +NI++ + T K+ DF L + + T
Sbjct: 131 LLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG---LARTAGTSFMMTP 184
Query: 173 EIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ T + PE + + E D++S G ++ E++ K
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILI-----NEVFQHKMRIISQINHKNVVK 69
LG+GGF ++ + D V K+V K L+ E ++ I + H++VV
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
G + +V E +L + + + + + LR + YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRNR- 137
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE 189
+IH D+K N+ L+++ K+ DF + + + T T ++ PE L
Sbjct: 138 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL--CGTPNYIAPEVLSKKG 193
Query: 190 KS---DVYSFGVVLVELLTGKHP-------RSYVALASNEMTRMVPYFPYPIENNSLRQI 239
S DV+S G ++ LL GK P +Y+ + NE + +P P
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINP--------- 242
Query: 240 LNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQV 277
+ A L K L+T T RPT+ ++
Sbjct: 243 ---------------VAASLIQKMLQTDPTARPTINEL 265
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 129
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ E V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA- 185
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 186 --PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 109/278 (39%), Gaps = 51/278 (18%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILI-----NEVFQHKMRIISQINHKNVVK 69
LG+GGF ++ + D V K+V K L+ E ++ I + H++VV
Sbjct: 28 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 85
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
G + +V E +L + + + + + LR + YLH
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRNR- 141
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE 189
+IH D+K N+ L+++ K+ DF + + + T T ++ PE L
Sbjct: 142 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL--CGTPNYIAPEVLSKKG 197
Query: 190 KS---DVYSFGVVLVELLTGKHP-------RSYVALASNEMTRMVPYFPYPIENNSLRQI 239
S DV+S G ++ LL GK P +Y+ + NE S+ +
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--------------SIPKH 243
Query: 240 LNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQV 277
+N + A L K L+T T RPT+ ++
Sbjct: 244 IN------------PVAASLIQKMLQTDPTARPTINEL 269
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 59/229 (25%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK--------- 55
K Y +G G G V Y VL N VA+KK ++ FQ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK--------LSRPFQNQTHAKRAYRE 73
Query: 56 MRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRI 113
+ ++ +NHKN++ +L V F P TL FQ V Y +++ C I
Sbjct: 74 LVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDV-YLVMELMDA-NLCQVI 119
Query: 114 AAE------------TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLI 161
E + +LHS G IIH D+K +NI++ + T K+ DF L
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LA 173
Query: 162 SSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ + T + T + PE + + E D++S G ++ E++ K
Sbjct: 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 49/224 (21%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y VL N VA+KK + + N+ + + ++
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 79
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAE-- 116
+NHKN++ +L V F P TL FQ V Y +++ C I E
Sbjct: 80 CVNHKNIISLLNV------------FTPQKTLEEFQDV-YLVMELMDA-NLCQVIQMELD 125
Query: 117 ----------TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ +LHS G IIH D+K +NI++ + T K+ DF L +
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGT 179
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ T + T + PE + + E D++S G ++ E++ K
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 128
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ E V
Sbjct: 129 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA- 184
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 185 --PEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 49/224 (21%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y VL N VA+KK + + N+ + + ++
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 72
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAE-- 116
+NHKN++ +L V F P TL FQ V Y +++ C I E
Sbjct: 73 CVNHKNIISLLNV------------FTPQKTLEEFQDV-YLVMELMDA-NLCQVIQMELD 118
Query: 117 ----------TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ +LHS G IIH D+K +NI++ + T K+ DF L +
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGT 172
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ T + T + PE + + E D++S G ++ E++ K
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 5 KATKNYDKRHLLGEGGFGFVYKGV--LPDNTLVAV----KKPKMVDKILINEVFQHKMRI 58
+ T+ Y LG+G F V + V L A+ KK D ++ + + RI
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARD----HQKLEREARI 63
Query: 59 ISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETA 118
+ H N+V++ E L+++ V G LF+ + + C++ +
Sbjct: 64 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ---QIL 120
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLDDNYTA---KVADFASSVLISSHDQTATTTKEIE 175
A+ + H +G ++H ++K N+LL K+ADF ++ + Q
Sbjct: 121 EAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--G 175
Query: 176 TVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHP 209
T G+L PE L + + D+++ GV+L LL G P
Sbjct: 176 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 49/224 (21%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y VL N VA+KK + + N+ + + ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAE-- 116
+NHKN++ +L V F P TL FQ V Y +++ C I E
Sbjct: 79 CVNHKNIISLLNV------------FTPQKTLEEFQDV-YLVMELMDA-NLCQVIQMELD 124
Query: 117 ----------TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ +LHS G IIH D+K +NI++ + T K+ DF L +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGT 178
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ T + T + PE + + E D++S G ++ E++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 49/224 (21%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y VL N VA+KK + + N+ + + ++
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 79
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAE-- 116
+NHKN++ +L V F P TL FQ V Y +++ C I E
Sbjct: 80 CVNHKNIISLLNV------------FTPQKTLEEFQDV-YLVMELMDA-NLCQVIQMELD 125
Query: 117 ----------TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ +LHS G IIH D+K +NI++ + T K+ DF L +
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGT 179
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ T + T + PE + + E D++S G ++ E++ K
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 8 KNYDKRHLLGEGGFGFVYKGV--LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHK 65
+ Y K LGEG + VYKG L DN LVA+K+ ++ + ++ ++ + H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 66 NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH 125
N+V + + K LV+E++ + L Q++ ++ L + + L Y H
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLD-DCGNIINMHNVKLFLF-QLLRGLAYCH 117
Query: 126 SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL 185
++H D+K N+L+++ K+ADF + S T T E+ T+ + P+ L
Sbjct: 118 R---QKVLHRDLKPQNLLINERGELKLADFGLARAKSI--PTKTYDNEVVTLWYRPPDIL 172
Query: 186 F----WTEKSDVYSFGVVLVELLTGK 207
++ + D++ G + E+ TG+
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 49/224 (21%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y VL N VA+KK + + N+ + + ++
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 71
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAE-- 116
+NHKN++ +L V F P TL FQ V Y +++ C I E
Sbjct: 72 CVNHKNIISLLNV------------FTPQKTLEEFQDV-YLVMELMDA-NLCQVIQMELD 117
Query: 117 ----------TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ +LHS G IIH D+K +NI++ + T K+ DF L +
Sbjct: 118 HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGT 171
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ T + T + PE + + E D++S G ++ E++ K
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 129
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ E V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA- 185
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 186 --PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 49/224 (21%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y VL N VA+KK + + N+ + + ++
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 77
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAE-- 116
+NHKN++ +L V F P TL FQ V Y +++ C I E
Sbjct: 78 CVNHKNIISLLNV------------FTPQKTLEEFQDV-YLVMELMDA-NLCQVIQMELD 123
Query: 117 ----------TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ +LHS G IIH D+K +NI++ + T K+ DF L +
Sbjct: 124 HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGT 177
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ T + T + PE + + E D++S G ++ E++ K
Sbjct: 178 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 49/224 (21%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y VL N VA+KK + + N+ + + ++
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 72
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAE-- 116
+NHKN++ +L V F P TL FQ V Y +++ C I E
Sbjct: 73 CVNHKNIISLLNV------------FTPQKTLEEFQDV-YLVMELMDA-NLCQVIQMELD 118
Query: 117 ----------TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ +LHS G IIH D+K +NI++ + T K+ DF L +
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGT 172
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ T + T + PE + + E D++S G ++ E++ K
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 129
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ E V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA- 185
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 186 --PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y VL N VA+KK + + N+ + + ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + QV++ R++ +
Sbjct: 79 XVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + T + T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG---LARTAGTSFMMTPYVVTR 189
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ PE + + E D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 129
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ E V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA- 185
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 186 --PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKM------VDKILINEVFQHKMRIISQINHKNVVK 69
+GEG +G VYK A+KK ++ + I E+ I+ ++ H N+VK
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREI-----SILKELKHSNIVK 64
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG- 128
+ V K +LV F+H+ ++L + L + L L+ +
Sbjct: 65 LYDVIHTKKRLVLV---------FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 129 --SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF 186
++H D+K N+L++ K+ADF + T E+ T+ + P+ L
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI--PVRKYTHEVVTLWYRAPDVLM 173
Query: 187 WTEKS----DVYSFGVVLVELLTG 206
++K D++S G + E++ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKM------VDKILINEVFQHKMRIISQINHKNVVK 69
+GEG +G VYK A+KK ++ + I E+ I+ ++ H N+VK
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREI-----SILKELKHSNIVK 64
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLG- 128
+ V K +LV F+H+ ++L + L + L L+ +
Sbjct: 65 LYDVIHTKKRLVLV---------FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 129 --SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF 186
++H D+K N+L++ K+ADF + T E+ T+ + P+ L
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI--PVRKYTHEVVTLWYRAPDVLM 173
Query: 187 WTEKS----DVYSFGVVLVELLTG 206
++K D++S G + E++ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y +L N VA+KK + + N+ + + ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + QV++ R++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + E+ T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMEPEVVTR 189
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ PE + + E D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 49/224 (21%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y VL N VA+KK + + N+ + + ++
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 116
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAE-- 116
+NHKN++ +L V F P TL FQ V Y +++ C I E
Sbjct: 117 CVNHKNIISLLNV------------FTPQKTLEEFQDV-YLVMELMDA-NLCQVIQMELD 162
Query: 117 ----------TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ +LHS G IIH D+K +NI++ + T K+ DF L +
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGT 216
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ T + T + PE + + E D++S G ++ E++ K
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 129
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ E V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA- 185
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 186 --PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 49/224 (21%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y VL N VA+KK + + N+ + + ++
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 116
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAE-- 116
+NHKN++ +L V F P TL FQ V Y +++ C I E
Sbjct: 117 CVNHKNIISLLNV------------FTPQKTLEEFQDV-YLVMELMDA-NLCQVIQMELD 162
Query: 117 ----------TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ +LHS G IIH D+K +NI++ + T K+ DF L +
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGT 216
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ T + T + PE + + E D++S G ++ E++ K
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
E A+D +H L +H D+K N+LLD N ++ADF S + ++ D T ++ +
Sbjct: 182 GEMVLAIDSIHQL---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMND-DGTVQSSVAV 237
Query: 175 ETVGWLDPEYLFWTE--------KSDVYSFGVVLVELLTGKHP 209
T ++ PE L E + D +S GV + E+L G+ P
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 120 ALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKE-----I 174
ALDY+H +G +H VK+++IL+ + ++ S++ + SH Q + +
Sbjct: 140 ALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 196
Query: 175 ETVGWLDPEYL-----FWTEKSDVYSFGVVLVELLTGKHP 209
+ + WL PE L + KSD+YS G+ EL G P
Sbjct: 197 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ K + + E + ++ I+ +I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S T + + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYY 129
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTA----KVADFASSVLISSHDQTATTTKEIETVGW 179
LHSL I H D+K NI+L D K+ DF + I ++ E V
Sbjct: 130 LHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA- 185
Query: 180 LDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 186 --PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y VL N VA+KK + + N+ + + ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + QV++ R++ +
Sbjct: 79 CVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + T + T
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG---LARTAGTSFMMTPYVVTR 189
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ PE + + E D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
E A+D +H L +H D+K N+LLD N ++ADF S + ++ D T ++ +
Sbjct: 198 GEMVLAIDSIHQL---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMND-DGTVQSSVAV 253
Query: 175 ETVGWLDPEYLFWTE--------KSDVYSFGVVLVELLTGKHP 209
T ++ PE L E + D +S GV + E+L G+ P
Sbjct: 254 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 55 KMRIISQINHKNVVKILGVCLETKV--PLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLR 112
++RI S H NV+ +LG C P L+ + P G+L+ +V ++ + + ++
Sbjct: 60 RLRIFS---HPNVLPVLGACQSPPAPHPTLITHWXPYGSLY-NVLHEGTNFVVDQSQAVK 115
Query: 113 IAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTK 172
A + A +LH+L P I + S ++ +D++ TA+++ S +
Sbjct: 116 FALDXARGXAFLHTL-EPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAP-- 172
Query: 173 EIETVGWLDPEYLFWTEK------SDVYSFGVVLVELLTGKHPRSYVALASNEMTRMV 224
W+ PE L + +D +SF V+L EL+T + P + L++ E+ V
Sbjct: 173 -----AWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVP--FADLSNXEIGXKV 223
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 120 ALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKE-----I 174
ALDY+H +G +H VK+++IL+ + ++ S++ + SH Q + +
Sbjct: 124 ALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 180
Query: 175 ETVGWLDPEYL-----FWTEKSDVYSFGVVLVELLTGKHP 209
+ + WL PE L + KSD+YS G+ EL G P
Sbjct: 181 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 220
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 9 NYDKRHLLGEGGFGFVYK----GVLPDNTLVAVKKPKMVD--KILINEVFQHKMRIISQI 62
+Y+ LG G F V K G + +KK ++ + + E + ++ I+ +I
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++ + + +L+ E V G LF + + S L+ LD
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK------QILD 140
Query: 123 YLHSLGSPPIIHGDVKSANILLDD----NYTAKVADFASSVLISSHDQTATTTKEIETVG 178
+H L S I H D+K NI+L D N K+ DF + I + ++ E V
Sbjct: 141 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 200
Query: 179 WLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 201 ---PEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 9 NYDKRHLLGEGGFGFVYK----GVLPDNTLVAVKKPKMVD--KILINEVFQHKMRIISQI 62
+Y+ LG G F V K G + +KK ++ + + E + ++ I+ +I
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++ + + +L+ E V G LF + + S L+ LD
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK------QILD 119
Query: 123 YLHSLGSPPIIHGDVKSANILLDD----NYTAKVADFASSVLISSHDQTATTTKEIETVG 178
+H L S I H D+K NI+L D N K+ DF + I + ++ E V
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 179
Query: 179 WLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 180 ---PEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHK----MRIISQINHKNVVKI 70
+G G +G V + VA+KK + + +E+F + + ++ + H+NV+ +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKK---LSRPFQSEIFAKRAYRELLLLKHMQHENVIGL 106
Query: 71 LGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
L V Y+F Q + + + + + + L Y+HS G
Sbjct: 107 LDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG-- 164
Query: 131 PIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----YLF 186
++H D+K N+ ++++ K+ DF ++ H A T + T + PE ++
Sbjct: 165 -VVHRDLKPGNLAVNEDCELKILDFG----LARH-ADAEMTGYVVTRWYRAPEVILSWMH 218
Query: 187 WTEKSDVYSFGVVLVELLTGK 207
+ + D++S G ++ E+LTGK
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGK 239
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y VL N VA+KK + + N+ + + ++
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 71
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + QV++ R++ +
Sbjct: 72 CVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 128
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + T + T
Sbjct: 129 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG---LARTAGTSFMMTPYVVTR 182
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ PE + + E D++S G ++ E++ K
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 49/223 (21%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y + +G G G V + VL N VAVKK + + N+ + + ++
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGIN--VAVKK---LSRPFQNQTHAKRAYRELVLLK 76
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAE-- 116
+NHKN++ +L V F P TL FQ V Y +++ C I E
Sbjct: 77 CVNHKNIISLLNV------------FTPQKTLEEFQDV-YLVMELMDA-NLCQVIHMELD 122
Query: 117 ----------TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ +LHS G IIH D+K +NI++ + T K+ DF L +
Sbjct: 123 HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAST 176
Query: 167 TATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
T + T + PE + + E D++S G ++ EL+ G
Sbjct: 177 NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 37/213 (17%)
Query: 16 LGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI--NHKNVVKILGV 73
+G+G +G V++G+ + VAVK D+ + + + I + + H N++ +
Sbjct: 16 VGKGRYGEVWRGLWHGES-VAVKIFSSRDE----QSWFRETEIYNTVLLRHDNILGFIAS 70
Query: 74 CLETKVP----LLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLH---- 125
+ ++ L+ + +G+L+ ++ Q+ + LR+A A L +LH
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP----HLALRLAVSAACGLAHLHVEIF 126
Query: 126 -SLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTAT-----TTKEIETVGW 179
+ G P I H D KS N+L+ N +AD +V+ H Q + + T +
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVM---HSQGSDYLDIGNNPRVGTKRY 183
Query: 180 LDPEYL--------FWTEK-SDVYSFGVVLVEL 203
+ PE L F + K +D+++FG+VL E+
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 9 NYDKRHLLGEGGFGFVYK----GVLPDNTLVAVKKPKMVD--KILINEVFQHKMRIISQI 62
+Y+ LG G F V K G + +KK ++ + + E + ++ I+ +I
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++ + + +L+ E V G LF + + S L+ LD
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK------QILD 126
Query: 123 YLHSLGSPPIIHGDVKSANILLDD----NYTAKVADFASSVLISSHDQTATTTKEIETVG 178
+H L S I H D+K NI+L D N K+ DF + I + ++ E V
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 186
Query: 179 WLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
PE + + ++D++S GV+ LL+G P
Sbjct: 187 ---PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 28/175 (16%)
Query: 48 INEVFQHKMRIISQINHKNVVKILGVCLETKVP--LLVYEFVPNGTLFQHVRYQSSQVLK 105
I +V+Q ++ I+ +++H NVVK++ V + +V+E V G + + +
Sbjct: 80 IEQVYQ-EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME---------VP 129
Query: 106 TWKTCLRIAA-----ETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVL 160
T K A + ++YLH IIH D+K +N+L+ ++ K+ADF S
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 161 ISSHDQTATTTKEIETVGWLDPEYLFWTEKS------DVYSFGVVLVELLTGKHP 209
D + T + T ++ PE L T K DV++ GV L + G+ P
Sbjct: 187 FKGSDALLSNT--VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 127 LGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF 186
L S IH D+ + NILL + K+ DF + I + W+ PE +F
Sbjct: 207 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 266
Query: 187 ---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+T +SDV+SFGV+L E+ + G P V + E R L++
Sbjct: 267 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR------------RLKEGTRM 313
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+ D E + + C ++RPT ++ E L +L
Sbjct: 314 RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 351
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 69 KILGVCLETKVPLLVY-EFVPNGTLFQHVRYQSSQVL 104
+LG C + PL+V EF G L ++R + ++ +
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 124
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 127 LGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF 186
L S IH D+ + NILL + K+ DF + I + W+ PE +F
Sbjct: 209 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 268
Query: 187 ---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+T +SDV+SFGV+L E+ + G P V + E R L++
Sbjct: 269 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR------------RLKEGTRM 315
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+ D E + + C ++RPT ++ E L +L
Sbjct: 316 RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 353
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 69 KILGVCLETKVPLLV-YEFVPNGTLFQHVRYQSSQVL 104
+LG C + PL+V EF G L ++R + ++ +
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 126
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y +L N VA+KK + + N+ + + ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + QV++ R++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + E+ T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMEPEVVTR 189
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ PE + + E D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 42/192 (21%)
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTT 171
+IA AL++LHS S +IH DVK +N+L++ K+ DF S +
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL-----VDDVA 165
Query: 172 KEIETVG--WLDPEYL-------FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTR 222
K+I+ ++ PE + ++ KSD++S G+ ++EL + P ++ +
Sbjct: 166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ 225
Query: 223 MV----PYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVS 278
+V P P AD+ E ++ S+CL+ + ERPT ++
Sbjct: 226 VVEEPSPQLP----------------ADKFSAEFVD----FTSQCLKKNSKERPTYPELM 265
Query: 279 EQLDSLRRLHEN 290
+ LHE+
Sbjct: 266 QH--PFFTLHES 275
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 127 LGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF 186
L S IH D+ + NILL + K+ DF + I + W+ PE +F
Sbjct: 214 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 273
Query: 187 ---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+T +SDV+SFGV+L E+ + G P V + E R L++
Sbjct: 274 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR------------RLKEGTRM 320
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+ D E + + C ++RPT ++ E L +L
Sbjct: 321 RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 358
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 69 KILGVCLETKVPLLV-YEFVPNGTLFQHVRYQSSQVL 104
+LG C + PL+V EF G L ++R + ++ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 15 LLGEGGFGFVYKGVLPD-NTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+LG+G V++G L A+K + + +V + ++ ++NHKN+VK+ +
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 74 CLE--TKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPP 131
E T+ +L+ EF P G+L+ + S+ L + + +++L G
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--- 132
Query: 132 IIHGDVKSANILL----DDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
I+H ++K NI+ D K+ DF ++ + +Q + E +L P+
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEE---YLHPDMYER 189
Query: 186 ---------FWTEKSDVYSFGVVLVELLTGKHP 209
+ D++S GV TG P
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 127 LGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF 186
L S IH D+ + NILL + K+ DF + I + W+ PE +F
Sbjct: 216 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 275
Query: 187 ---WTEKSDVYSFGVVLVELLT-GKHPRSYVALASNEMTRMVPYFPYPIENNSLRQILNF 242
+T +SDV+SFGV+L E+ + G P V + E R L++
Sbjct: 276 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR------------RLKEGTRM 322
Query: 243 QVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDSL 284
+ D E + + C ++RPT ++ E L +L
Sbjct: 323 RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNL 360
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 16 LGEGGFGFVYK----GVLPDNTL--VAVKKPKMVDKILINEVFQHKMRIISQINHK-NVV 68
LG G FG V + G+ T VAVK K + +++I+ I H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 69 KILGVCLETKVPLLV-YEFVPNGTLFQHVRYQSSQVL 104
+LG C + PL+V EF G L ++R + ++ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 133
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 43/213 (20%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK-MRIISQINHKNVVKIL 71
+G G +G V Y L VAVKK + LI+ ++ +R++ + H+NV+ +L
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 72 GVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQV---LKTWKTCLRIAAETAS------- 119
V F P ++ F V ++ + L C ++ E
Sbjct: 86 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 133
Query: 120 -ALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVG 178
L Y+HS G IIH D+K +N+ ++++ ++ DF L D+ T + T
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFG---LARQADEEMTGY--VATRW 185
Query: 179 WLDPE----YLFWTEKSDVYSFGVVLVELLTGK 207
+ PE ++ + + D++S G ++ ELL GK
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK K I+ + ++R++ + H+NV+ +L V
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 102 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 209
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 43/213 (20%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK-MRIISQINHKNVVKIL 71
+G G +G V Y L VAVKK + LI+ ++ +R++ + H+NV+ +L
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 72 GVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQV---LKTWKTCLRIAAETAS------- 119
V F P ++ F V ++ + L C ++ E
Sbjct: 94 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 141
Query: 120 -ALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVG 178
L Y+HS G IIH D+K +N+ ++++ ++ DF L D+ T + T
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFG---LARQADEEMTGY--VATRW 193
Query: 179 WLDPE----YLFWTEKSDVYSFGVVLVELLTGK 207
+ PE ++ + + D++S G ++ ELL GK
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 107/278 (38%), Gaps = 51/278 (18%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILI-----NEVFQHKMRIISQINHKNVVK 69
LG+GGF ++ + D V K+V K L+ E ++ I + H++VV
Sbjct: 22 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 79
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
G + +V E +L + + + + + LR + YLH
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRNR- 135
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE 189
+IH D+K N+ L+++ K+ DF + + + T ++ PE L
Sbjct: 136 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--CGTPNYIAPEVLSKKG 191
Query: 190 KS---DVYSFGVVLVELLTGKHP-------RSYVALASNEMTRMVPYFPYPIENNSLRQI 239
S DV+S G ++ LL GK P +Y+ + NE + +P P
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINP--------- 240
Query: 240 LNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQV 277
+ A L K L+T T RPT+ ++
Sbjct: 241 ---------------VAASLIQKMLQTDPTARPTINEL 263
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 15 LLGEGGFGFVYKGVLPD-NTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+LG+G V++G L A+K + + +V + ++ ++NHKN+VK+ +
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 74 CLE--TKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPP 131
E T+ +L+ EF P G+L+ + S+ L + + +++L G
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--- 132
Query: 132 IIHGDVKSANILL----DDNYTAKVADFASSVLISSHDQ 166
I+H ++K NI+ D K+ DF ++ + +Q
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 95 F----TPARSLEEFNDVYLVTHL---MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 202
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y +L N VA+KK + + N+ + + ++
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 80
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + QV++ R++ +
Sbjct: 81 CVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 137
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + + T
Sbjct: 138 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMVPFVVTR 191
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
+ PE + + E D++S G ++ E++ G
Sbjct: 192 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILI-----NEVFQHKMRIISQINHKNVVK 69
LG+GGF ++ + D V K+V K L+ E ++ I + H++VV
Sbjct: 46 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 103
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
G + +V E +L + + + + + LR + YLH
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRNR- 159
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE 189
+IH D+K N+ L+++ K+ DF + + + T ++ PE L
Sbjct: 160 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--CGTPNYIAPEVLSKKG 215
Query: 190 KS---DVYSFGVVLVELLTGKHP-------RSYVALASNEMTRMVPYFPYPIENNSLRQI 239
S DV+S G ++ LL GK P +Y+ + NE S+ +
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--------------SIPKH 261
Query: 240 LNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQV 277
+N + A L K L+T T RPT+ ++
Sbjct: 262 IN------------PVAASLIQKMLQTDPTARPTINEL 287
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 47/215 (21%)
Query: 16 LGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK-MRIISQINHKNVVKIL 71
+G G +G V Y L VAVKK + LI+ ++ +R++ + H+NV+ +L
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 72 GV--------------CLETKVPLLVYEFVPNGTLF-QHVRYQSSQVLKTWKTCLRIAAE 116
V + T + + V + L +HV++ Q+L+
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLR----------- 142
Query: 117 TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIET 176
L Y+HS G IIH D+K +N+ ++++ ++ DF L D+ T + T
Sbjct: 143 ---GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFG---LARQADEEMTGY--VAT 191
Query: 177 VGWLDPE----YLFWTEKSDVYSFGVVLVELLTGK 207
+ PE ++ + + D++S G ++ ELL GK
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 33/258 (12%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI--------NHK 65
LLG GGFG VY G+ + DN VA+K + D+I + R+ ++
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFS 73
Query: 66 NVVKILGVCLETKVPLLVYEFV-PNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYL 124
V+++L +L+ E + P LF + + + + ++ + A+ +
Sbjct: 74 GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF---WQVLEAVRHC 130
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
H+ G ++H D+K NIL+D N K+ DF S L+ T + + PE
Sbjct: 131 HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYS----PPE 183
Query: 184 YL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPYFPYPIENNS---L 236
++ + + V+S G++L +++ G P + E+ R +F + + +
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSSECQHLI 239
Query: 237 RQILNFQVADENEMEEIE 254
R L + +D EEI+
Sbjct: 240 RWCLALRPSDRPTFEEIQ 257
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y +L N VA+KK + + N+ + + ++
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 83
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + QV++ R++ +
Sbjct: 84 CVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 140
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + T + T
Sbjct: 141 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMTPYVVTR 194
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ PE + + E D++S G ++ E++ K
Sbjct: 195 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 15 LLGEGGFGFVYKGVLPDNTLVAVKKPKMVDKILI-----NEVFQHKMRIISQINHKNVVK 69
LG+GGF ++ + D V K+V K L+ E ++ I + H++VV
Sbjct: 48 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 70 ILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGS 129
G + +V E +L + + + + + LR + YLH
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRNR- 161
Query: 130 PPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLFWTE 189
+IH D+K N+ L+++ K+ DF + + + T ++ PE L
Sbjct: 162 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--CGTPNYIAPEVLSKKG 217
Query: 190 KS---DVYSFGVVLVELLTGKHP-------RSYVALASNEMTRMVPYFPYPIENNSLRQI 239
S DV+S G ++ LL GK P +Y+ + NE S+ +
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--------------SIPKH 263
Query: 240 LNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQV 277
+N + A L K L+T T RPT+ ++
Sbjct: 264 IN------------PVAASLIQKMLQTDPTARPTINEL 289
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y +G G G V Y +L N VA+KK + + N+ + + ++
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK---LSRPFQNQTHAKRAYRELVLMK 72
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAA---ET 117
+NHKN++ +L V K + EF + + + QV++ R++ +
Sbjct: 73 CVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
+ +LHS G IIH D+K +NI++ + T K+ DF L + + T + T
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMTPYVVTR 183
Query: 178 GWLDPEYLF---WTEKSDVYSFGVVLVELLTGK 207
+ PE + + E D++S G ++ E++ K
Sbjct: 184 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 27/205 (13%)
Query: 16 LGEGGFGFVY----KGVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKIL 71
LG G VY KG L +KK VDK ++ + ++ ++ +++H N++K+
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKK--TVDK----KIVRTEIGVLLRLSHPNIIKLK 114
Query: 72 GVCLETKVPL-LVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSP 130
+ ET + LV E V G LF + + + ++ + A+ YLH G
Sbjct: 115 EI-FETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK---QILEAVAYLHENG-- 168
Query: 131 PIIHGDVKSANILLDD---NYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYL-- 185
I+H D+K N+L + K+ADF S ++ T T G+ PE L
Sbjct: 169 -IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCG---TPGYCAPEILRG 224
Query: 186 -FWTEKSDVYSFGVVLVELLTGKHP 209
+ + D++S G++ LL G P
Sbjct: 225 CAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 97 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARH-TADEMTGYVATRWYRAPE 199
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 118 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 173
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 174 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 217
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 218 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 269
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + + +R L + +D EEI+
Sbjct: 270 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 300
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 95 F----TPARSLEEFNDVYLVTHL---MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 202
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 96 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 203
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 97 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARH-TADEMTGYVATRWYRAPE 199
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 90 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 145
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 146 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 189
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 190 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 241
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + + +R L + +D EEI+
Sbjct: 242 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 272
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 91 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 146
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 147 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 190
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 191 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 242
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + + +R L + +D EEI+
Sbjct: 243 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 273
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGX-VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 103 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 158
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 159 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 202
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 203 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 254
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + + +R L + +D EEI+
Sbjct: 255 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 285
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 96 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 203
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 97 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 199
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 95 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 197
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 76 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 131
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 132 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 175
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 176 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 227
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + + +R L + +D EEI+
Sbjct: 228 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 258
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 89 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 136
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 191
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 101 F----TPARSLEEFNDVYLVTHL---MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 154 SADIIHRDLKPSNLAVNEDXELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 208
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 102 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 209
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 92 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 199
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 102 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 209
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 96 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 149 SADIIHRDLKPSNLAVNEDSELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 203
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 92 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 199
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 113 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 215
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 75 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 130
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 131 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 174
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 175 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 226
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + + +R L + +D EEI+
Sbjct: 227 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 257
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 97 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARH-TADEMTGYVATRWYRAPE 199
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 90 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 197
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 71 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 126
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 127 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 170
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 171 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 222
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + + +R L + +D EEI+
Sbjct: 223 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 253
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 74 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 129
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 130 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 173
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 174 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 225
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + + +R L + +D EEI+
Sbjct: 226 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 256
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 95 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 197
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 101 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 154 SADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 208
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 92 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 194
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 76 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 131
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 132 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 175
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 176 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 227
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + + +R L + +D EEI+
Sbjct: 228 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 258
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 92 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 145 SADIIHRDLKPSNLAVNEDSELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 199
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 110 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 165
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 166 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 209
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 210 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 261
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + + +R L + +D EEI+
Sbjct: 262 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 292
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 76 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 131
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 132 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 175
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 176 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 227
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + + +R L + +D EEI+
Sbjct: 228 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 258
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 110 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 212
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 109 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 211
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 87 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 189
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 87 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 189
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 91 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 146
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 147 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 190
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 191 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 242
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + +R L + +D EEI+
Sbjct: 243 FRQRVSXECQHLIRWCLALRPSDRPTFEEIQ 273
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 192
Query: 184 YLF----WTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 86 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 188
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 90 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 145
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 146 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 189
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 190 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 241
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + +R L + +D EEI+
Sbjct: 242 FRQRVSXECQHLIRWCLALRPSDRPTFEEIQ 272
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 88 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 135
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 136 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 190
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVD-------------KILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 118 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 173
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 174 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 217
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 218 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 269
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + +R L + +D EEI+
Sbjct: 270 FRQRVSXECQHLIRWCLALRPSDRPTFEEIQ 300
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVD-------------KILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 123 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 178
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 179 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 222
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 223 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 274
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + +R L + +D EEI+
Sbjct: 275 FRQRVSXECQHLIRWCLALRPSDRPTFEEIQ 305
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+LGEG V + L + AVK + + + VF+ + H+NV++++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 74 CLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPP 131
E LV+E + G++ H+ R +++ + + + ASALD+LH+ G
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASALDFLHNKG--- 131
Query: 132 IIHGDVKSANILLDDN---YTAKVADFA-SSVLISSHDQTATTTKEIET----VGWLDPE 183
I H D+K NIL + K+ DF S + + D + +T E+ T ++ PE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 184 YL--------FWTEKSDVYSFGVVLVELLTGKHP 209
+ + ++ D++S GV+L LL+G P
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFA-SSVLISS-HDQTAT 169
+IA AL++LHS S +IH DVK +N+L++ K DF S L+
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 170 TTKEIETVGWLDPEY--LFWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMV--- 224
K ++PE ++ KSD++S G+ +EL + P ++ ++V
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEP 257
Query: 225 -PYFPYPIENNSLRQILNFQVADENEMEEIEIVAKLASKCLRTSGTERPTMRQVSEQLDS 283
P P AD+ E ++ S+CL+ + ERPT ++ +
Sbjct: 258 SPQLP----------------ADKFSAEFVD----FTSQCLKKNSKERPTYPELXQH--P 295
Query: 284 LRRLHEN 290
LHE+
Sbjct: 296 FFTLHES 302
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 98 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 153
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 154 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 197
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 198 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 249
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + +R L + +D EEI+
Sbjct: 250 FRQRVSXECQHLIRWCLALRPSDRPTFEEIQ 280
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 57/227 (25%)
Query: 8 KNYDKRHLLGEGGFGFV---YKGVLPDNTLVAVKKPKMVDKILINEVFQHK----MRIIS 60
K Y + +G G G V + VL N VAVKK + + N+ + + ++
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGIN--VAVKK---LSRPFQNQTHAKRAYRELVLLK 78
Query: 61 QINHKNVVKILGVCLETKVPLLVYEFVPNGTL--FQHVRYQSSQVLKTWKTCLRIAAE-- 116
+NHKN++ +L V F P TL FQ V Y +++ C I E
Sbjct: 79 CVNHKNIISLLNV------------FTPQKTLEEFQDV-YLVMELMDA-NLCQVIHMELD 124
Query: 117 ----------TASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ +LHS G IIH D+K +NI++ + T K+ DF + +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA-------R 174
Query: 167 TATT----TKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
TA T T + T + PE + + D++S G ++ EL+ G
Sbjct: 175 TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQS-SQVLKTWKT----CLRIAAETASALDYLHSLG 128
P E + L H+ + ++K K + + L Y+HS
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDXELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 197
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 66/233 (28%)
Query: 16 LGEGGFGFVYKGV--LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKN------V 67
LGEG FG V + + VAVK K VD+ E + +++++ +N +
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYC--EAARSEIQVLEHLNTTDPNSTFRC 79
Query: 68 VKIL-------GVCLETKV-PLLVYEFVP-NGTL---FQHVRYQSSQVLKTWKTCLRIAA 115
V++L +C+ ++ L Y+F+ NG L H+R + Q+ K+
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKS--------- 130
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILL-DDNYTA------------------KVADFA 156
+++LHS + H D+K NIL +YT KV DF
Sbjct: 131 -----VNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 157 SSVLISSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
S+ H T +T+ PE + W++ DV+S G +L+E G
Sbjct: 183 SATYDDEHHSTLVSTRHYRA-----PEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQS-SQVLKTWKT----CLRIAAETASALDYLHSLG 128
P E + L H+ + ++K K + + L Y+HS
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 197
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQS-SQVLKTWKT----CLRIAAETASALDYLHSLG 128
P E + L H+ + ++K+ K + + L Y+HS
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
IIH D+K +N+ ++++ K+ DF + H T + T + PE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDSELKILDFG----LCRHTDDEMTGY-VATRWYRAPEIMLNW 197
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEI 174
AE A+D +H LG +H D+K NILLD ++ADF S + + + D T + +
Sbjct: 169 AEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRA-DGTVRSLVAV 224
Query: 175 ETVGWLDPEYL----------FWTEKSDVYSFGVVLVELLTGKHP 209
T +L PE L + + D ++ GV E+ G+ P
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 91 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 146
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 147 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 190
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 191 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 242
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + +R L + D EEI+
Sbjct: 243 FRQRVSXECQHLIRWCLALRPXDRPTFEEIQ 273
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ D+ ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDYG----LARHTDDEMTGY-VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 59/271 (21%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 71 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 126
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 127 -------------HNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 170
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHPRSYVALASNEMTRMVPY 226
+ + PE++ + + V+S G++L +++ G P + E+ R +
Sbjct: 171 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVF 222
Query: 227 FPYPIENNS---LRQILNFQVADENEMEEIE 254
F + +R L + +D EEI+
Sbjct: 223 FRQRVSXECQHLIRWCLALRPSDRPTFEEIQ 253
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+LGEG V + L + AVK + + + VF+ + H+NV++++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 74 CLETKVPLLVYEFVPNGTLFQHV--RYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPP 131
E LV+E + G++ H+ R +++ + + + ASALD+LH+ G
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASALDFLHNKG--- 131
Query: 132 IIHGDVKSANILLDDN---YTAKVADF--ASSVLISSHDQTATTTKEIETVG---WLDPE 183
I H D+K NIL + K+ DF S + ++ +T + + G ++ PE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 184 YL--------FWTEKSDVYSFGVVLVELLTGKHP 209
+ + ++ D++S GV+L LL+G P
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 96 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 203
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V + L +AVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 119 F----TPATSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 171
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 172 SADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 226
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + D++S G ++ ELLTG+
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 100 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 147
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 148 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 202
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 113 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H + T + PE +
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMXGY-VATRWYRAPEIMLNW 220
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 96/223 (43%), Gaps = 28/223 (12%)
Query: 4 VKATKNYDKRHLLGEGGFGFVYKGVLPDNTLV--AVKKPKMVDKILINEV---FQHKMRI 58
K Y LLGEG +G V K VL TL AVK K I + ++++
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQL 59
Query: 59 ISQINHKNVVKILGVCL--ETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIA-- 114
+ ++ HKNV++++ V E + +V E+ G S K + C
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM----QEMLDSVPEKRFPVCQAHGYF 115
Query: 115 AETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADF--ASSVLISSHDQTATTT- 171
+ L+YLHS G I+H D+K N+LL T K++ A ++ + D T T+
Sbjct: 116 CQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 172 -----KEIETVGWLDPEYLFWTEKSDVYSFGVVLVELLTGKHP 209
+ E LD F K D++S GV L + TG +P
Sbjct: 173 GSPAFQPPEIANGLD---TFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 16 LGEGGFGFVYKGVLPDNTL---VAVKKPKMVDKILINEVFQ-HKMRIISQINHKNVVKIL 71
LG G FG V++ + D AVKK ++ EVF+ ++ + ++ +V +
Sbjct: 80 LGRGSFGEVHR--MKDKQTGFQCAVKKVRL-------EVFRVEELVACAGLSSPRIVPLY 130
Query: 72 GVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPP 131
G E + E + G+L Q ++ L + L+YLH+
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCL---PEDRALYYLGQALEGLEYLHTR---R 184
Query: 132 IIHGDVKSANILL-DDNYTAKVADFASSVLISSH--DQTATTTKEIE-TVGWLDPEYLF- 186
I+HGDVK+ N+LL D A + DF ++ + ++ T I T + PE +
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 187 --WTEKSDVYSFGVVLVELLTGKHP 209
K D++S +++ +L G HP
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 47 LINEVFQHKMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTL-FQHVRYQSSQVLK 105
L E + + I + H ++V++L + +V+EF+ L F+ V+ + +
Sbjct: 68 LSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY 127
Query: 106 TWKTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILL---DDNYTAKVADFASSVLIS 162
+ + AL Y H IIH DVK N+LL +++ K+ DF ++ +
Sbjct: 128 SEAVASHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG 184
Query: 163 SHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTGKHP 209
A + T ++ PE + + + DV+ GV+L LL+G P
Sbjct: 185 ESGLVAGG--RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 86 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRG 133
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 188
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 110 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE +
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPEIMLNW 217
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 109 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 211
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 86 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGY-VATRWYRAPE 188
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDF----YLARHTDDEMTGY-VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 52/223 (23%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 104 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 159
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 160 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 203
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHP 209
+ + PE++ + + V+S G++L +++ G P
Sbjct: 204 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 52/223 (23%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVD-------------KILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 104 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 159
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 160 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 203
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHP 209
+ + PE++ + + V+S G++L +++ G P
Sbjct: 204 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 52/223 (23%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 103 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 158
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 159 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 202
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHP 209
+ + PE++ + + V+S G++L +++ G P
Sbjct: 203 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 52/223 (23%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 104 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 159
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 160 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 203
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHP 209
+ + PE++ + + V+S G++L +++ G P
Sbjct: 204 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 52/223 (23%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 104 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 159
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 160 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 203
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHP 209
+ + PE++ + + V+S G++L +++ G P
Sbjct: 204 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 52/223 (23%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 103 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 158
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 159 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 202
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHP 209
+ + PE++ + + V+S G++L +++ G P
Sbjct: 203 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 52/223 (23%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 103 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 158
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 159 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 202
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHP 209
+ + PE++ + + V+S G++L +++ G P
Sbjct: 203 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQI-NHKNVVKILGV 73
LG G + V++ + + +N V VK K V K I + +++I+ + N++ + +
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKNKI----KREIKILENLRGGPNIITLADI 100
Query: 74 CLE--TKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPP 131
+ ++ P LV+E V N T F+ Q Q L + + E ALDY HS+G
Sbjct: 101 VKDPVSRTPALVFEHV-NNTDFK----QLYQTLTDYDIRFYMY-EILKALDYCHSMG--- 151
Query: 132 IIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATTTKEIETVGWLDPE----YLF 186
I+H DVK N+++D + ++ D+ L + + + + PE Y
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 187 WTEKSDVYSFGVVLVELLTGKHP 209
+ D++S G +L ++ K P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 36/121 (29%)
Query: 114 AAETASALDYLHSLGSPPIIHGDVKSANILLDDNY------------------------- 148
E AL+YL + + H D+K NILLDD Y
Sbjct: 143 CIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKST 199
Query: 149 TAKVADFASSVLISSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLT 205
K+ DF + S + + T++ PE + W SD++SFG VL EL T
Sbjct: 200 GIKLIDFGCATFKSDYHGSIINTRQYRA-----PEVILNLGWDVSSDMWSFGCVLAELYT 254
Query: 206 G 206
G
Sbjct: 255 G 255
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 52/223 (23%)
Query: 15 LLGEGGFGFVYKGV-LPDNTLVAVK---KPKMVDK-------------ILINEV---FQH 54
LLG GGFG VY G+ + DN VA+K K ++ D +L+ +V F
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 55 KMRIISQINHKNVVKILGVCLETKVPLL-VYEFVPNGTLFQH--VRYQSSQVLKTWKTCL 111
+R++ + ++ LE P+ +++F+ Q R QVL+ + C
Sbjct: 71 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 126
Query: 112 RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTA-KVADFASSVLISSHDQTATT 170
H+ G ++H D+K NIL+D N K+ DF S L+ T
Sbjct: 127 -------------HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 170
Query: 171 TKEIETVGWLDPEYL----FWTEKSDVYSFGVVLVELLTGKHP 209
+ + PE++ + + V+S G++L +++ G P
Sbjct: 171 GTRVYS----PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 36/168 (21%)
Query: 53 QHKMRIISQINHK-----NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTW 107
H ++++ NHK +VV + V E + L + ++ G +V+ S Q+L
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL-IKKYEHRGIPLIYVKQISKQLL--- 141
Query: 108 KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILL------DDNYTAKVADFASSVLI 161
LDY+H IIH D+K N+L+ ++ K+AD ++
Sbjct: 142 -----------LGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY 188
Query: 162 SSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
H + T+E + PE L W +D++S ++ EL+TG
Sbjct: 189 DEHYTNSIQTREYRS-----PEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 36/168 (21%)
Query: 53 QHKMRIISQINHK-----NVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTW 107
H ++++ NHK +VV + V E + L + ++ G +V+ S Q+L
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL-IKKYEHRGIPLIYVKQISKQLL--- 141
Query: 108 KTCLRIAAETASALDYLHSLGSPPIIHGDVKSANILL------DDNYTAKVADFASSVLI 161
LDY+H IIH D+K N+L+ ++ K+AD ++
Sbjct: 142 -----------LGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY 188
Query: 162 SSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
H + T+E + PE L W +D++S ++ EL+TG
Sbjct: 189 DEHYTNSIQTREYRS-----PEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ + + + E + ++ I+ Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H N++ + V +L+ E V G LF + + S + + ++ + ++Y
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK---QILDGVNY 130
Query: 124 LHSLGSPPIIHGDVKSANI-LLDDNYT---AKVADFASSVLISSHDQTATTTKEI-ETVG 178
LH+ I H D+K NI LLD N K+ DF ++ + K I T
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG----LAHEIEDGVEFKNIFGTPE 183
Query: 179 WLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
++ PE + + ++D++S GV+ LL+G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ F ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILGFG----LARHTDDEMTGY-VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 92/225 (40%), Gaps = 26/225 (11%)
Query: 1 SELVKATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK-----------PKMVDKILIN 49
+EL Y + + G +G V GV + VA+K+ + D L
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 50 EVFQHKMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKT 109
V + ++R+++ +H N++ + + + + P + ++ + + +R +QV+ +
Sbjct: 75 RVLR-EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYL----VTELMRTDLAQVIHDQRI 129
Query: 110 CL---RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ I L LH L ++H D+ NILL DN + DF L
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFN---LAREDTA 186
Query: 167 TATTTKEIETVGWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
A T + + PE + +T+ D++S G V+ E+ K
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 92/225 (40%), Gaps = 26/225 (11%)
Query: 1 SELVKATKNYDKRHLLGEGGFGFVYKGVLPDNTLVAVKK-----------PKMVDKILIN 49
+EL Y + + G +G V GV + VA+K+ + D L
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 50 EVFQHKMRIISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKT 109
V + ++R+++ +H N++ + + + + P + ++ + + +R +QV+ +
Sbjct: 75 RVLR-EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYL----VTELMRTDLAQVIHDQRI 129
Query: 110 CL---RIAAETASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQ 166
+ I L LH L ++H D+ NILL DN + DF L
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFN---LAREDTA 186
Query: 167 TATTTKEIETVGWLDPEYLF----WTEKSDVYSFGVVLVELLTGK 207
A T + + PE + +T+ D++S G V+ E+ K
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF + + D+ A + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF---VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 90 F----TPARSLEEFNDVYLVTHLM---GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ DF + + D+ A + T + PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF---VATRWYRAPEIMLNW 197
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 16 LGEGGFGFVYKGVLPDNTL---VAVKKPKMVDKILINEVFQ-HKMRIISQINHKNVVKIL 71
+G G FG V++ + D AVKK ++ EVF+ ++ + ++ +V +
Sbjct: 66 VGRGSFGEVHR--MKDKQTGFQCAVKKVRL-------EVFRVEELVACAGLSSPRIVPLY 116
Query: 72 GVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPP 131
G E + E + G+L Q ++ L + L+YLH+
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCL---PEDRALYYLGQALEGLEYLHTR---R 170
Query: 132 IIHGDVKSANILL-DDNYTAKVADFASSVLISSHDQTATTTKEIETVGW-------LDPE 183
I+HGDVK+ N+LL D A + DF ++ + Q K + T + + PE
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCL----QPDGLGKSLLTGDYIPGTETHMAPE 226
Query: 184 YLF---WTEKSDVYSFGVVLVELLTGKHP 209
+ K D++S +++ +L G HP
Sbjct: 227 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 15/154 (9%)
Query: 63 NHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALD 122
H N++ + V + K LV E + G L + Q + L +T ++
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT---VE 135
Query: 123 YLHSLGSPPIIHGDVKSANILLDDNY----TAKVADFASSVLISSHDQTATTTKEIETVG 178
YLHS G ++H D+K +NIL D ++ DF + + + + T T
Sbjct: 136 YLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT--PCYTAN 190
Query: 179 WLDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
++ PE L + E D++S G++L +L G P
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 16 LGEGGFGFVYKGVLPDNTL---VAVKKPKMVDKILINEVFQ-HKMRIISQINHKNVVKIL 71
+G G FG V++ + D AVKK ++ EVF+ ++ + ++ +V +
Sbjct: 82 VGRGSFGEVHR--MKDKQTGFQCAVKKVRL-------EVFRVEELVACAGLSSPRIVPLY 132
Query: 72 GVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPP 131
G E + E + G+L Q ++ L + L+YLH+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCL---PEDRALYYLGQALEGLEYLHTR---R 186
Query: 132 IIHGDVKSANILL-DDNYTAKVADFASSVLISSH--DQTATTTKEIE-TVGWLDPEYLF- 186
I+HGDVK+ N+LL D A + DF ++ + ++ T I T + PE +
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 187 --WTEKSDVYSFGVVLVELLTGKHP 209
K D++S +++ +L G HP
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ D ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDAG----LARHTDDEMTGY-VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY-----LHSLG 128
P E + L H+ L C ++ + L Y L +
Sbjct: 90 F----TPARSLEEFNDVYLVTHL---MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 129 SPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE----Y 184
S IIH D+K +N+ ++++ K+ D ++ H T + T + PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDRG----LARHTDDEMTGY-VATRWYRAPEIMLNW 197
Query: 185 LFWTEKSDVYSFGVVLVELLTGK 207
+ + + D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H N++ + V + K LV E + G L + Q + L +T ++Y
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT---VEY 136
Query: 124 LHSLGSPPIIHGDVKSANILLDDNY----TAKVADFASSVLISSHDQTATTTKEIETVGW 179
LHS G ++H D+K +NIL D ++ DF + + + + T T +
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CYTANF 191
Query: 180 LDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
+ PE L + E D++S G++L +L G P
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ + + + E + ++ I+ Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S + + ++ + ++Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK---QILDGVNY 130
Query: 124 LHSLGSPPIIHGDVKSANI-LLDDNYT---AKVADFASSVLISSHDQTATTTKEI-ETVG 178
LH+ I H D+K NI LLD N K+ DF ++ + K I T
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG----LAHEIEDGVEFKNIFGTPE 183
Query: 179 WLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
++ PE + + ++D++S GV+ LL+G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ + + + E + ++ I+ Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S + + ++ + ++Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK---QILDGVNY 130
Query: 124 LHSLGSPPIIHGDVKSANI-LLDDNYT---AKVADFASSVLISSHDQTATTTKEI-ETVG 178
LH+ I H D+K NI LLD N K+ DF ++ + K I T
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG----LAHEIEDGVEFKNIFGTPE 183
Query: 179 WLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
++ PE + + ++D++S GV+ LL+G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 110 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF ++ H + T + PE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMXGX-VATRWYRAPE 212
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ + + + E + ++ I+ Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S + + ++ + ++Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK---QILDGVNY 130
Query: 124 LHSLGSPPIIHGDVKSANI-LLDDNYT---AKVADFASSVLISSHDQTATTTKEI-ETVG 178
LH+ I H D+K NI LLD N K+ DF ++ + K I T
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG----LAHEIEDGVEFKNIFGTPE 183
Query: 179 WLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
++ PE + + ++D++S GV+ LL+G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGV-LPDNTLVAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 86 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ DF + + D+ A + T + PE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF---VATRWYRAPE 188
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 10 YDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRIISQIN 63
YD LG G F V K G+ + ++ + + + E + ++ I+ Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H NV+ + V +L+ E V G LF + + S + + ++ + ++Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK---QILDGVNY 130
Query: 124 LHSLGSPPIIHGDVKSANI-LLDDNYT---AKVADFASSVLISSHDQTATTTKEI-ETVG 178
LH+ I H D+K NI LLD N K+ DF ++ + K I T
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG----LAHEIEDGVEFKNIFGTPE 183
Query: 179 WLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
++ PE + + ++D++S GV+ LL+G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 24/219 (10%)
Query: 5 KATKNYDKRHLLGEGGFGFVYK------GVLPDNTLVAVKKPKMVDKILINEVFQHKMRI 58
K YD LG G F V K G+ + ++ + + + E + ++ I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 59 ISQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETA 118
+ Q+ H NV+ + V +L+ E V G LF + + S + + ++ +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK---QIL 125
Query: 119 SALDYLHSLGSPPIIHGDVKSANI-LLDDNYT---AKVADFASSVLISSHDQTATTTKEI 174
++YLH+ I H D+K NI LLD N K+ DF ++ + K I
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG----LAHEIEDGVEFKNI 178
Query: 175 -ETVGWLDPEYLFWTE---KSDVYSFGVVLVELLTGKHP 209
T ++ PE + + ++D++S GV+ LL+G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 16 LGEGGFGFVYKGVLPDNTL-VAVKK-PKMVDKILINEVFQHKMRIISQINHKNVVKILGV 73
+G G +G V L VAVKK + I+ + ++R++ + H+NV+ +L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 74 CLETKVPLLVYEFVPNGTLFQH-----VRYQSSQVLKTWKTCLRIAAETASALDY----- 123
F P +L + V + L C ++ + L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
L + S IIH D+K +N+ ++++ K+ D ++ H T + T + PE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDGG----LARHTDDEMTGY-VATRWYRAPE 192
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGK 207
++ + + D++S G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 28/208 (13%)
Query: 8 KNYDKRHLLGEGGFGFVYK-GVLPDNTLVAVKK-------PKMVDKILINEVFQHKMRII 59
+++ + LG G +G V+K D L AVK+ PK + L EV H+ +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLA-EVGSHEK--V 113
Query: 60 SQINHKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQV--LKTWKTCLRIAAET 117
Q H V++ E + L E +L QH + + + W LR +T
Sbjct: 114 GQ--HPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGY-LR---DT 166
Query: 118 ASALDYLHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETV 177
AL +LHS G ++H DVK ANI L K+ DF +L+ A +E +
Sbjct: 167 LLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFG--LLVELGTAGAGEVQEGDPR 221
Query: 178 GWLDPEYL--FWTEKSDVYSFGVVLVEL 203
++ PE L + +DV+S G+ ++E+
Sbjct: 222 -YMAPELLQGSYGTAADVFSLGLTILEV 248
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 66/233 (28%)
Query: 16 LGEGGFGFVYKGV--LPDNTLVAVKKPKMVDKILINEVFQHKMRIISQINHKN------V 67
LGEG FG V + + VAVK K VD+ E + +++++ +N +
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYC--EAARSEIQVLEHLNTTDPNSTFRC 79
Query: 68 VKIL-------GVCLETKV-PLLVYEFVP-NGTL---FQHVRYQSSQVLKTWKTCLRIAA 115
V++L +C+ ++ L Y+F+ NG L H+R + Q+ K+
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKS--------- 130
Query: 116 ETASALDYLHSLGSPPIIHGDVKSANILL-DDNYTA------------------KVADFA 156
+++LHS + H D+K NIL +YT KV DF
Sbjct: 131 -----VNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 157 SSVLISSHDQTATTTKEIETVGWLDPEYLF---WTEKSDVYSFGVVLVELLTG 206
S+ H T + PE + W++ DV+S G +L+E G
Sbjct: 183 SATYDDEHHSTLVXXRHYRA-----PEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 64 HKNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
H N++ + V + K +V E + G L + Q + L +T ++Y
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKT---VEY 131
Query: 124 LHSLGSPPIIHGDVKSANILLDDNY----TAKVADFASSVLISSHDQTATTTKEIETVGW 179
LH+ G ++H D+K +NIL D + ++ DF + + + + T T +
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT--PCYTANF 186
Query: 180 LDPEYL---FWTEKSDVYSFGVVLVELLTGKHP 209
+ PE L + D++S GV+L +LTG P
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLDDNYTA--KVADFASSVLISSHDQTATTTKEIET 176
S L L +L IIH D+K NILL + KV DF SS H + T I++
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY--EHQRVYTX---IQS 262
Query: 177 VGWLDPEYLFWTEKS---DVYSFGVVLVELLTG 206
+ PE + D++S G +L ELLTG
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 119 SALDYLHSLGSPPIIHGDVKSANILLDDNYTA--KVADFASSVLISSHDQTATTTKEIET 176
S L L +L IIH D+K NILL + KV DF SS H + T I++
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY--EHQRVYTX---IQS 262
Query: 177 VGWLDPEYLFWTEKS---DVYSFGVVLVELLTG 206
+ PE + D++S G +L ELLTG
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 66 NVVKILGVCLE--TKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
N++K++ + +K P LV+E++ N T F+ Q Q+L + + E ALDY
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYI-NNTDFK----QLYQILTDFDIRFYMY-ELLKALDY 147
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
HS G I+H DVK N+++D + K L + + + + PE
Sbjct: 148 CHSKG---IMHRDVKPHNVMID--HQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPE 202
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGKHP 209
Y + D++S G +L ++ + P
Sbjct: 203 LLVDYQMYDYSLDMWSLGCMLASMIFRREP 232
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 66 NVVKILGVCLE--TKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDY 123
N++K++ + +K P LV+E++ N T F+ Q Q+L + + E ALDY
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYI-NNTDFK----QLYQILTDFDIRFYMY-ELLKALDY 152
Query: 124 LHSLGSPPIIHGDVKSANILLDDNYTAKVADFASSVLISSHDQTATTTKEIETVGWLDPE 183
HS G I+H DVK N+++D + K L + + + + PE
Sbjct: 153 CHSKG---IMHRDVKPHNVMID--HQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPE 207
Query: 184 ----YLFWTEKSDVYSFGVVLVELLTGKHP 209
Y + D++S G +L ++ + P
Sbjct: 208 LLVDYQMYDYSLDMWSLGCMLASMIFRREP 237
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 17/138 (12%)
Query: 77 TKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYLHSLGSPPIIHGD 136
++ P LV+E V N T F+ +R Q L + + E ALDY HS+G I+H D
Sbjct: 106 SRTPALVFEHV-NNTDFKQLR----QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRD 156
Query: 137 VKSANILLDDNYTA-KVADFASSVLISSHDQTATTTKEIETVGWLDPE----YLFWTEKS 191
VK N+++D + ++ D+ L + + + + PE Y +
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 192 DVYSFGVVLVELLTGKHP 209
D++S G +L ++ K P
Sbjct: 214 DMWSLGCMLASMIFRKEP 231
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 15/207 (7%)
Query: 9 NYDKRHLLGEGGFGFVYKGV--LPDNTLVA--VKKPKMVDKILINEVFQHKMRIISQINH 64
+YD LG G FG V++ N A V P DK E + +++ +S + H
Sbjct: 52 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK----ETVRKEIQTMSVLRH 107
Query: 65 KNVVKILGVCLETKVPLLVYEFVPNGTLFQHVRYQSSQVLKTWKTCLRIAAETASALDYL 124
+V + + +++YEF+ G LF+ V + +++ + + + L ++
Sbjct: 108 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE--DEAVEYMRQVCKGLCHM 165
Query: 125 HSLGSPPIIHGDVKSANILLDDNYTA--KVADFASSVLISSHDQTATTTKEIETVGWLDP 182
H +H D+K NI+ + K+ DF + + TT E
Sbjct: 166 HENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 222
Query: 183 EYLFWTEKSDVYSFGVVLVELLTGKHP 209
E +D++S GV+ LL+G P
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSP 249
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,717,976
Number of Sequences: 62578
Number of extensions: 334676
Number of successful extensions: 3588
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 472
Number of HSP's that attempted gapping in prelim test: 1331
Number of HSP's gapped (non-prelim): 1165
length of query: 309
length of database: 14,973,337
effective HSP length: 99
effective length of query: 210
effective length of database: 8,778,115
effective search space: 1843404150
effective search space used: 1843404150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)