Query 040700
Match_columns 512
No_of_seqs 316 out of 2166
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 17:39:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040700.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040700hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 2.8E-88 9.6E-93 723.7 48.7 490 20-512 3-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 7.6E-86 2.6E-90 703.4 47.4 476 23-511 1-495 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 1.2E-79 4.1E-84 660.6 43.2 475 19-511 6-497 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 2.7E-74 9.3E-79 613.0 39.7 446 23-510 2-472 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 5.2E-73 1.8E-77 605.8 37.8 445 36-509 6-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 5.6E-69 1.9E-73 578.8 38.5 450 24-509 23-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 1.1E-67 3.6E-72 569.0 40.7 456 18-510 15-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 9.2E-68 3.2E-72 569.8 39.9 461 22-511 15-529 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 6E-67 2.1E-71 561.2 39.7 448 19-510 4-479 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 1.2E-64 4E-69 538.6 33.4 428 39-509 13-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 4.3E-39 1.5E-43 348.1 32.6 209 20-243 30-257 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 5.7E-32 1.9E-36 291.1 33.5 180 62-244 53-251 (524)
13 3pm9_A Putative oxidoreductase 100.0 2.6E-30 9E-35 274.5 32.0 194 62-257 43-253 (476)
14 4bby_A Alkyldihydroxyacetoneph 100.0 7E-30 2.4E-34 281.9 20.7 189 63-252 198-405 (658)
15 4feh_A Oxidoreductase DPRE1; a 100.0 4.7E-29 1.6E-33 265.0 21.2 190 62-257 35-238 (481)
16 2uuu_A Alkyldihydroxyacetoneph 100.0 6.5E-29 2.2E-33 269.6 17.9 188 67-258 134-338 (584)
17 1wvf_A 4-cresol dehydrogenase 100.0 1.9E-28 6.4E-33 264.0 19.8 190 68-259 54-268 (520)
18 2i0k_A Oxidoreductase; MIX alp 99.9 2E-27 7E-32 257.5 15.6 188 39-235 9-225 (561)
19 2vfr_A Xylitol oxidase, aldito 99.9 6.5E-27 2.2E-31 245.9 14.4 165 62-235 12-187 (422)
20 3js8_A Cholesterol oxidase; ch 99.9 1.5E-26 5.2E-31 246.1 16.6 180 46-234 11-220 (540)
21 1e8g_A Vanillyl-alcohol oxidas 99.9 1.2E-25 4E-30 244.0 21.0 190 67-259 67-300 (560)
22 1f0x_A DLDH, D-lactate dehydro 99.9 5.2E-26 1.8E-30 245.4 12.2 187 67-256 42-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 4.2E-23 1.5E-27 207.8 11.3 154 68-233 52-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 8E-23 2.8E-27 207.9 10.9 156 68-233 28-199 (357)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 3.6E-22 1.2E-26 202.2 7.4 149 68-231 46-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 3.5E-21 1.2E-25 195.3 14.4 155 69-233 13-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.8 2.6E-20 8.8E-25 182.6 6.4 143 70-232 22-173 (268)
28 2yvs_A Glycolate oxidase subun 99.7 5.7E-17 1.9E-21 154.4 11.0 105 128-238 1-121 (219)
29 1ffv_C CUTM, flavoprotein of c 97.3 0.00049 1.7E-08 67.8 8.2 146 70-231 4-177 (287)
30 1n62_C Carbon monoxide dehydro 95.5 0.0099 3.4E-07 58.4 4.4 144 70-230 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 95.0 0.0094 3.2E-07 62.4 2.8 141 74-230 180-345 (462)
32 2vfr_A Xylitol oxidase, aldito 91.7 0.12 4.1E-06 53.3 4.3 59 429-504 355-414 (422)
33 1wvf_A 4-cresol dehydrogenase 87.2 0.57 1.9E-05 49.7 5.4 30 476-505 481-511 (520)
34 1t3q_C Quinoline 2-oxidoreduct 82.5 1.1 3.7E-05 43.6 4.6 140 70-229 4-174 (288)
35 4bby_A Alkyldihydroxyacetoneph 82.3 2 7E-05 46.8 7.1 29 475-503 625-654 (658)
36 3nvz_B Xanthine dehydrogenase/ 79.8 1.1 3.6E-05 44.1 3.4 67 70-144 9-81 (305)
37 3hrd_C Nicotinate dehydrogenas 78.1 1.6 5.4E-05 42.6 4.1 69 71-144 3-76 (296)
38 1e8g_A Vanillyl-alcohol oxidas 58.6 11 0.00037 40.1 5.7 23 483-505 523-545 (560)
39 4feh_A Oxidoreductase DPRE1; a 57.7 7.3 0.00025 40.6 4.1 28 475-504 446-473 (481)
40 1rm6_B 4-hydroxybenzoyl-COA re 55.2 9 0.00031 37.7 4.1 67 70-144 5-77 (324)
41 2i0k_A Oxidoreductase; MIX alp 51.2 6.1 0.00021 42.1 2.2 22 483-504 533-554 (561)
42 3js8_A Cholesterol oxidase; ch 43.0 8.4 0.00029 40.8 1.7 23 482-504 511-533 (540)
43 1xty_A PTH, peptidyl-tRNA hydr 40.2 29 0.00098 28.8 4.3 42 62-105 48-90 (120)
44 2uuu_A Alkyldihydroxyacetoneph 39.9 30 0.001 36.9 5.5 29 475-503 551-580 (584)
45 1f0x_A DLDH, D-lactate dehydro 38.1 15 0.00052 39.1 2.8 28 481-509 535-562 (571)
46 1rzw_A Protein AF2095(GR4); be 28.5 71 0.0024 26.5 4.8 38 69-106 47-85 (123)
47 1wn2_A Peptidyl-tRNA hydrolase 28.0 90 0.0031 25.7 5.4 38 68-105 53-91 (121)
48 2zv3_A PTH, peptidyl-tRNA hydr 26.1 94 0.0032 25.3 5.1 38 68-105 47-85 (115)
49 1rlk_A Hypothetical protein TA 25.3 98 0.0033 25.3 5.1 38 68-105 49-87 (117)
50 2g2c_A Putative molybdenum cof 23.3 1.3E+02 0.0044 26.0 5.8 41 72-112 47-87 (167)
51 1q7s_A BIT1, protein CGI-147; 22.1 1.3E+02 0.0046 24.5 5.3 41 62-104 45-86 (117)
52 3unc_A Xanthine dehydrogenase/ 20.9 46 0.0016 39.2 2.9 68 71-144 233-304 (1332)
53 1mkz_A Molybdenum cofactor bio 20.2 1.7E+02 0.0057 25.5 5.9 40 72-111 46-86 (172)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=2.8e-88 Score=723.73 Aligned_cols=490 Identities=49% Similarity=0.893 Sum_probs=412.8
Q ss_pred ccccHHhhhhhccCCCccccceEEcCCCcccHHHHhhcccccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEE
Q 040700 20 VEENFLQCLSMQSQSSIAISEAIYTSSNASFSSVLQSYVRNLRFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIRI 99 (512)
Q Consensus 20 ~~~~~~~c~~~~~~~~~~~~~~v~~p~d~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v 99 (512)
++++|.+||+.....+..+++.|++|+|+.|++++.++.+|.||+.....+|.+||+|+|++||+++|++|+++++|+++
T Consensus 3 ~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v 82 (518)
T 3vte_A 3 PRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRT 82 (518)
T ss_dssp HHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEE
Confidence 46789999999877778899999999999999998888999999998899999999999999999999999999999999
Q ss_pred eecccCCCCCCcccCCCeEEEEecCCccEEEeCCCCeEEEecCcc--------cc--cccccCccCCCCccccccccCCC
Q 040700 100 RSGGHDYDGLSYVSNVPFVILDMFNLRSINISLTDETAWVQAGAT--------AS--KIHGFPAGVCPTLGVGGHFSGGG 169 (512)
Q Consensus 100 ~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~--------~~--~g~~~~~G~~~~vgvgG~~~gGg 169 (512)
||||||+.+.+.....++++|||++|++|++|+++++++||+|++ .+ .|+.++.|.|++|||||+++|||
T Consensus 83 rggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg 162 (518)
T 3vte_A 83 RSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGG 162 (518)
T ss_dssp ESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCC
T ss_pred ECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCCC
Confidence 999999998874322248999999999999999999999999998 23 37889999999999999999999
Q ss_pred CCCccccccchhhheeeEEEEecCCeEEeccCCCchhHHHHhhcCCCceEEEEEEEEEEEecCceEEEEEEEeccc-chH
Q 040700 170 YGNMMRKFGLSVDNIVDAQIVDVQGRILDRKSMGEDLFWAIRGGGAASFCVILSWKIKLVQVPETVTVFRVVKTLE-QGA 248 (512)
Q Consensus 170 ~g~~s~~~G~~~D~v~~~~vV~a~G~~v~~~~~~~dLfwa~rG~g~g~fGvvt~~~~~l~p~~~~~~~~~~~~~~~-~~~ 248 (512)
+|+++++||+++|+|+++|||++||++++.+.+|+|||||+||||+|+|||||+++||++|.|+.+..|.+.+.++ +++
T Consensus 163 ~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~ 242 (518)
T 3vte_A 163 YGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGL 242 (518)
T ss_dssp CCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHH
T ss_pred CccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHH
Confidence 9999999999999999999999999999754568999999999855899999999999999998777787777654 557
Q ss_pred HHHHHHHHHHHhccCCcCceEEEEEeeecCC---CCCCceEEEEEEEEEeCCHHHHHHHHHhhCCcCCCCcccceecchH
Q 040700 249 TDLVAKWQQVAADKLDQDLFIRLFINAVNGS---KEGEKTVKVSFVAMFLGQTEKLLSLMKQSFPELGIQKKDCFEMRWV 325 (512)
Q Consensus 249 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (512)
.+++.+|+++. +++|+++++.+.+...++. ..+...+.+.+.++|.|+.+++.++|++.|++++.....+.+++|.
T Consensus 243 ~~~l~~~~~~~-~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~ 321 (518)
T 3vte_A 243 VKLFNKWQNIA-YKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWI 321 (518)
T ss_dssp HHHHHHHHHHG-GGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHH
T ss_pred HHHHHHHHHHH-HcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchh
Confidence 88999999999 8999999998887754321 1122234677889999999999999888787887766778899999
Q ss_pred HHHHhhcCCCCC-Cc---hhhhccCCCCCCccceeccccccCCCCHhHHHHHHHHHHHc--CceEEEEeecCcccCCCCC
Q 040700 326 ESVLFWFDQPIG-TP---LEVLLNRIPKSQVSLKRKSDYVQEPIPKTGLESIWKLMIEL--GEVGMQWNPYGGIMSEIPA 399 (512)
Q Consensus 326 ~~~~~~~~~~~~-~~---~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~--~~~~i~~~~~GGav~~v~~ 399 (512)
+.+.++..++.+ .+ .+.+.++......+||.||.|+.+++++++|+.+++.+.+. +.+.+.++++||++++++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~~ 401 (518)
T 3vte_A 322 DTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEISE 401 (518)
T ss_dssp HHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSCT
T ss_pred hhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCCC
Confidence 988887655433 33 45555664444557789999998889999999999988763 3577899999999999999
Q ss_pred CCCCCcccCCceeEEEEeeccCCCChhhhHHHHHHHHHHHHhhcccccCCCCccccccCCccCC-CC-CCC-Cccccchh
Q 040700 400 TETPFPHRAGNIFKIQYSANWNQPGIEVTNRYLNLTRTFYEAMTPYVSKNPREAFLNYRDIDIG-SN-TNG-TYEEGKIY 476 (512)
Q Consensus 400 ~~tAfp~R~~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~p~~~~~~~g~Y~Ny~d~~l~-~~-~~~-~~~~~~~w 476 (512)
++|||+||+++.|.+++.+.|.++ ++++++++|++++++.|.|+.++.+.|+|+||.|.+++ .+ ..+ +++.+..|
T Consensus 402 ~~TAf~hR~~~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~w 479 (518)
T 3vte_A 402 SAIPFPHRAGIMYELWYTASWEKQ--EDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARIW 479 (518)
T ss_dssp TSSSCCCCTTCCEEEEEEEEECCT--TTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHHH
T ss_pred CCCcccccCcceEEEEEEEecCCc--chhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhhH
Confidence 999999998558999999999765 45678899999999999999655567999999998876 21 111 12234579
Q ss_pred hhhcccccHHHHHHhhhccCCCCCCcCCCCCCCCCC
Q 040700 477 GIKYFKNNFDRLVRVKTSVDPDNFFTYEQSIPISPS 512 (512)
Q Consensus 477 ~~~yyG~ny~RL~~iK~kyDP~nvF~~~qsI~p~~~ 512 (512)
++.|||+||+||++||+||||+|+|+++|||+|+++
T Consensus 480 ~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 480 GEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred HHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 999999999999999999999999999999999764
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=7.6e-86 Score=703.37 Aligned_cols=476 Identities=39% Similarity=0.723 Sum_probs=406.1
Q ss_pred cHHhhhhhccCCCccccceEEcCCCcccHHHHhhcccccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeec
Q 040700 23 NFLQCLSMQSQSSIAISEAIYTSSNASFSSVLQSYVRNLRFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSG 102 (512)
Q Consensus 23 ~~~~c~~~~~~~~~~~~~~v~~p~d~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~gg 102 (512)
+|.+||+.....+ ++.|++|+|+.|+++++++.+|.||+.....+|.+||+|+|++||+++|++|+++++|+++|||
T Consensus 1 ~~~~cl~~~~~~~---~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGg 77 (495)
T 3fw9_A 1 DLLSCLTFNGVRN---HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSG 77 (495)
T ss_dssp CHHHHHHHTTCCC---EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESS
T ss_pred ChhHHHhhcCCCC---CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 4889999976433 7889999999999998778999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcccCCCeEEEEecCCccEEEeCCCCeEEEecCcc--------ccc--ccccCccCCCCccccccccCCCCCC
Q 040700 103 GHDYDGLSYVSNVPFVILDMFNLRSINISLTDETAWVQAGAT--------ASK--IHGFPAGVCPTLGVGGHFSGGGYGN 172 (512)
Q Consensus 103 Gh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~--------~~~--g~~~~~G~~~~vgvgG~~~gGg~g~ 172 (512)
|||+.|.+...+.++++|||++|++|++|+++++++||+|++ .++ |+.++.|.|++|||||+++|||+|+
T Consensus 78 Gh~~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~ 157 (495)
T 3fw9_A 78 GHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGM 157 (495)
T ss_dssp CCCTTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCT
T ss_pred CcCCCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcc
Confidence 999998877543358999999999999999999999999998 445 8899999999999999999999999
Q ss_pred ccccccchhhheeeEEEEecCCeEEeccCCCchhHHHHhhcCCCceEEEEEEEEEEEecCceEEEEEEEeccc-chHHHH
Q 040700 173 MMRKFGLSVDNIVDAQIVDVQGRILDRKSMGEDLFWAIRGGGAASFCVILSWKIKLVQVPETVTVFRVVKTLE-QGATDL 251 (512)
Q Consensus 173 ~s~~~G~~~D~v~~~~vV~a~G~~v~~~~~~~dLfwa~rG~g~g~fGvvt~~~~~l~p~~~~~~~~~~~~~~~-~~~~~~ 251 (512)
++++||+++|+|++++||++||++++++.+++|||||+|||++|+|||||+++||++|.|+.+..+.+.++++ +++.++
T Consensus 158 ~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~ 237 (495)
T 3fw9_A 158 MSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSL 237 (495)
T ss_dssp THHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHH
T ss_pred cccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHH
Confidence 9999999999999999999999999755578999999999665899999999999999998777777777654 557889
Q ss_pred HHHHHHHHhccCCcCceEEEEEeeecCCCCCCceEEEEEEEEEeCCHHHHHHHHHhhCCcCCCCcccceecchHHHHHhh
Q 040700 252 VAKWQQVAADKLDQDLFIRLFINAVNGSKEGEKTVKVSFVAMFLGQTEKLLSLMKQSFPELGIQKKDCFEMRWVESVLFW 331 (512)
Q Consensus 252 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (512)
+.+|++++ .++|+++++.+..... .....+.+.++|.|+.+++.+.|++.+++++.....+.+++|.+...++
T Consensus 238 l~~~~~~~-~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~ 310 (495)
T 3fw9_A 238 LHKWQFVA-EELEEDFTLSVLGGAD------EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYL 310 (495)
T ss_dssp HHHHHHHH-HHSCTTEEEEEEEEEE------TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHH
T ss_pred HHHHHHHH-hcCChhHeEEEEEcCC------CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHH
Confidence 99999999 8999999887764311 1234577889999999999998888777787766778899999988776
Q ss_pred cCCCCCCchhhhccCCCC-CCccceeccccccCCCCHhHHHHHHHHHHHcCceEEEEeecCcccCCCCCCCCCCcccCCc
Q 040700 332 FDQPIGTPLEVLLNRIPK-SQVSLKRKSDYVQEPIPKTGLESIWKLMIELGEVGMQWNPYGGIMSEIPATETPFPHRAGN 410 (512)
Q Consensus 332 ~~~~~~~~~~~~~~r~~~-~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~GGav~~v~~~~tAfp~R~~~ 410 (512)
+.++. .+.+.++... .+.+||.||.|+.+++++++++.+++.+.+.+...+.++++||++++++.++|||+||+++
T Consensus 311 ~~~~~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~hR~~~ 387 (495)
T 3fw9_A 311 AGLET---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHRSGT 387 (495)
T ss_dssp TTCSC---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCCCTTC
T ss_pred hcccc---hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCccccCcc
Confidence 54332 3344454332 3467899999999999999999999998877767789999999999999999999999855
Q ss_pred eeEEEEeeccCCCChhhhHHHHHHHHHHHHhhcccccCCCCccccccCCccCCCCCC-------CCccccchhhhhcccc
Q 040700 411 IFKIQYSANWNQPGIEVTNRYLNLTRTFYEAMTPYVSKNPREAFLNYRDIDIGSNTN-------GTYEEGKIYGIKYFKN 483 (512)
Q Consensus 411 ~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~p~~~~~~~g~Y~Ny~d~~l~~~~~-------~~~~~~~~w~~~yyG~ 483 (512)
.|.+++...|.++.++.++++++|++++++.|.|+..+.++|+|+||.|.+++.++. .+++.++.|++.|||+
T Consensus 388 ~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~ 467 (495)
T 3fw9_A 388 RLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLS 467 (495)
T ss_dssp CEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGG
T ss_pred ceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHh
Confidence 899999999975433456778899999999999997645578999999988753111 0112234799999999
Q ss_pred cHHHHHHhhhccCCCCCCcCCCCCCCCC
Q 040700 484 NFDRLVRVKTSVDPDNFFTYEQSIPISP 511 (512)
Q Consensus 484 ny~RL~~iK~kyDP~nvF~~~qsI~p~~ 511 (512)
||+||++||+||||+|+|+++|||+|++
T Consensus 468 n~~RL~~vK~~yDP~n~F~~~qsI~p~~ 495 (495)
T 3fw9_A 468 NYERLIRAKTLIDPNNVFNHPQSIPPMA 495 (495)
T ss_dssp GHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred HHHHHHHHHHhhCcHhhCCCCCCCCCCC
Confidence 9999999999999999999999999974
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=1.2e-79 Score=660.63 Aligned_cols=475 Identities=44% Similarity=0.834 Sum_probs=388.1
Q ss_pred cccccHHhhhhhccCCCccccceEEcCCCcccHHHHhhcccccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEE
Q 040700 19 SVEENFLQCLSMQSQSSIAISEAIYTSSNASFSSVLQSYVRNLRFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIR 98 (512)
Q Consensus 19 ~~~~~~~~c~~~~~~~~~~~~~~v~~p~d~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 98 (512)
+..++|.+||..... .+.|++|+|+.|.+++.++.+|.||+.....+|.+||+|+|++||+++|++|+++++||+
T Consensus 6 ~~~~~f~~~L~~~~~-----~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~ 80 (500)
T 3tsh_A 6 AAKEDFLGCLVKEIP-----PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIR 80 (500)
T ss_dssp ---CHHHHHHHHHSC-----GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEE
T ss_pred ccHHHHHHHHHhhCC-----CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEE
Confidence 456789999998653 356889999999999988999999999999999999999999999999999999999999
Q ss_pred EeecccCCCCCCccc--CCCeEEEEecCCccEEEeCCCCeEEEecCcc--------cccc--cccCccCCCCcccccccc
Q 040700 99 IRSGGHDYDGLSYVS--NVPFVILDMFNLRSINISLTDETAWVQAGAT--------ASKI--HGFPAGVCPTLGVGGHFS 166 (512)
Q Consensus 99 v~ggGh~~~g~s~~~--~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~--------~~~g--~~~~~G~~~~vgvgG~~~ 166 (512)
+|||||++.|.+.+. .+++++|||++||+|++|+++++++||+|++ .++| +.+++|.|++||+||+++
T Consensus 81 ~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~ 160 (500)
T 3tsh_A 81 VRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFA 160 (500)
T ss_dssp EESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHH
T ss_pred EEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccc
Confidence 999999999877542 1258999999999999999999999999998 3455 678899999999999999
Q ss_pred CCCCCCccccccchhhheeeEEEEecCCeEEeccCCCchhHHHHhhcCCCceEEEEEEEEEEEecCceEEEEEEEecccc
Q 040700 167 GGGYGNMMRKFGLSVDNIVDAQIVDVQGRILDRKSMGEDLFWAIRGGGAASFCVILSWKIKLVQVPETVTVFRVVKTLEQ 246 (512)
Q Consensus 167 gGg~g~~s~~~G~~~D~v~~~~vV~a~G~~v~~~~~~~dLfwa~rG~g~g~fGvvt~~~~~l~p~~~~~~~~~~~~~~~~ 246 (512)
|||+|+++++||+++|||+++|||++||++++++.+++|||||+||||+|+|||||+++||++|.|+.+..+...+...+
T Consensus 161 ~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~ 240 (500)
T 3tsh_A 161 GGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSE 240 (500)
T ss_dssp TCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTT
T ss_pred cccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHH
Confidence 99999999999999999999999999999998667789999999988878999999999999999988777777666666
Q ss_pred hHHHHHHHHHHHHhccCCcCceEEEEEeeecCCCCCCceEEEEEEEEEeCCHHHHHHHHHhhCCcCCCCcccceecchHH
Q 040700 247 GATDLVAKWQQVAADKLDQDLFIRLFINAVNGSKEGEKTVKVSFVAMFLGQTEKLLSLMKQSFPELGIQKKDCFEMRWVE 326 (512)
Q Consensus 247 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (512)
.+.+++.+|+.+. +++|+++...+.... ....+..+|.|+.+++.+.+.+.+++++.....+..++|.+
T Consensus 241 ~~~~~~~~~~~~~-~~~~~~l~~~~~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 309 (500)
T 3tsh_A 241 GAVDIINKWQVVA-PQLPADLMIRIIAQG----------PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQ 309 (500)
T ss_dssp THHHHHHHHHHHG-GGSCTTEEEEEEESS----------SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHH
T ss_pred HHHHHHHHHHHhh-hccChhhEEEEEecC----------CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhc
Confidence 6788999999998 889998877654321 13456778999998888877777777776666667778877
Q ss_pred HHHhhcCCCCCCchhhhccCCCCCCccceeccccccCCCCHhHHHHHHHHHHHcC-ceEEEEeecCcccCCCCCCCCCCc
Q 040700 327 SVLFWFDQPIGTPLEVLLNRIPKSQVSLKRKSDYVQEPIPKTGLESIWKLMIELG-EVGMQWNPYGGIMSEIPATETPFP 405 (512)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~-~~~i~~~~~GGav~~v~~~~tAfp 405 (512)
...+..........+.+.++......+.+.++.++.++++++.++.+++.+...+ ...+.++++||++++++.++|+|+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~ata~~ 389 (500)
T 3tsh_A 310 SIPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFP 389 (500)
T ss_dssp HHHHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTSSSCC
T ss_pred cchhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCccCcCc
Confidence 6554322221222223334433333445667777777788877777776654443 356778899999999999999999
Q ss_pred ccCCceeEEEEeeccCCCChhhhHHHHHHHHHHHHhhcccccCCCCccccccCCccCCCCCC----CCccccchhhhhcc
Q 040700 406 HRAGNIFKIQYSANWNQPGIEVTNRYLNLTRTFYEAMTPYVSKNPREAFLNYRDIDIGSNTN----GTYEEGKIYGIKYF 481 (512)
Q Consensus 406 ~R~~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~p~~~~~~~g~Y~Ny~d~~l~~~~~----~~~~~~~~w~~~yy 481 (512)
||++.++++++...|.++ +.+++.++|++++++.|.|+....+.++|+||+|.+++..+. ..+...++|++.||
T Consensus 390 ~R~~~l~~i~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~ 467 (500)
T 3tsh_A 390 HRKGVLFNIQYVNYWFAP--GAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYF 467 (500)
T ss_dssp CCTTCCEEEEEEEEECST--TCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHH
T ss_pred ccCCcEEEEEEEEecCCc--chhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhh
Confidence 999767888889999876 456678899999999999987656678999999998764321 01122357999999
Q ss_pred cccHHHHHHhhhccCCCCCCcCCCCCCCCC
Q 040700 482 KNNFDRLVRVKTSVDPDNFFTYEQSIPISP 511 (512)
Q Consensus 482 G~ny~RL~~iK~kyDP~nvF~~~qsI~p~~ 511 (512)
|+||+||++||+||||+|+|+++|||||..
T Consensus 468 g~Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~ 497 (500)
T 3tsh_A 468 KGNFERLAITKGKVDPTDYFRNEQSIPPLI 497 (500)
T ss_dssp GGGHHHHHHHHHHHCTTCCSCCTTSCCCCC
T ss_pred hHHHHHHHHHHHHhCcccccCCCCCCCCCC
Confidence 999999999999999999999999999974
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=2.7e-74 Score=612.99 Aligned_cols=446 Identities=22% Similarity=0.413 Sum_probs=358.2
Q ss_pred cHHhhhhhccCCCccccceEEcCCCcccHHHHhhcccccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeec
Q 040700 23 NFLQCLSMQSQSSIAISEAIYTSSNASFSSVLQSYVRNLRFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSG 102 (512)
Q Consensus 23 ~~~~c~~~~~~~~~~~~~~v~~p~d~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~gg 102 (512)
+|.+||+... ..|++|+|+.|+++++ . |+......|.+||+|+|++||+++|++|+++++|+.+|||
T Consensus 2 ~l~~cl~~~~-------~~v~~p~~~~y~~~~~--~----~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~gg 68 (473)
T 3rja_A 2 AIEACLSAAG-------VPIDIPGTADYERDVE--P----FNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSG 68 (473)
T ss_dssp HHHHHHHHTT-------CCBCCTTSHHHHHHTC--C----SBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESS
T ss_pred hHHHHHHhCC-------CcEECCCCCchHHHHH--H----hhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 5889999963 3589999999998853 4 4444457999999999999999999999999999999999
Q ss_pred ccCCCCCCcccCCCeEEEEecCCccEE-EeCCCCeEEEecCcc--------cccc-cccCccCCCCccccccccCCCCCC
Q 040700 103 GHDYDGLSYVSNVPFVILDMFNLRSIN-ISLTDETAWVQAGAT--------ASKI-HGFPAGVCPTLGVGGHFSGGGYGN 172 (512)
Q Consensus 103 Gh~~~g~s~~~~~~g~vIdl~~l~~i~-~d~~~~~v~v~~G~~--------~~~g-~~~~~G~~~~vgvgG~~~gGg~g~ 172 (512)
|||+.+.+....+++++|||++|++|. +|+++++++||+|++ .++| +.++.|.|++|||||+++|||+|+
T Consensus 69 Gh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~~~~p~G~~~~vgvgG~~~ggg~G~ 148 (473)
T 3rja_A 69 GHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKYGRAISHGTCPGVGISGHFAHGGFGF 148 (473)
T ss_dssp CCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHHSEECCCCSCTTCBHHHHHHTCCCCT
T ss_pred CCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcCCEEeccCCCCCcEeeeeccCCCCCc
Confidence 999986554322347999999999997 999999999999998 5667 889999999999999999999999
Q ss_pred ccccccchhhheeeEEEEecCCeEEe-ccCCCchhHHHHhhcCCCceEEEEEEEEEEEecCceEEEEEEEeccc-c-hHH
Q 040700 173 MMRKFGLSVDNIVDAQIVDVQGRILD-RKSMGEDLFWAIRGGGAASFCVILSWKIKLVQVPETVTVFRVVKTLE-Q-GAT 249 (512)
Q Consensus 173 ~s~~~G~~~D~v~~~~vV~a~G~~v~-~~~~~~dLfwa~rG~g~g~fGvvt~~~~~l~p~~~~~~~~~~~~~~~-~-~~~ 249 (512)
++++||+++|+|+++|||++||++++ ++.+++|||||+|||+ |+|||||+++||++|.|+.+..+.+.+.+. . ++.
T Consensus 149 ~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~ 227 (473)
T 3rja_A 149 SSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSAL 227 (473)
T ss_dssp THHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHH
T ss_pred ccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHH
Confidence 99999999999999999999999996 6667999999999997 899999999999999998777777777664 2 367
Q ss_pred HHHHHHHHHHhc-cCCcCceEEEEEeeecCCCCCCceEEEEEEEEEeCCHHHHHHHHHhhCCcCC-CCcccce-ecchHH
Q 040700 250 DLVAKWQQVAAD-KLDQDLFIRLFINAVNGSKEGEKTVKVSFVAMFLGQTEKLLSLMKQSFPELG-IQKKDCF-EMRWVE 326 (512)
Q Consensus 250 ~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~-~~~~~~~-~~~~~~ 326 (512)
+++++|+++. . ++|+++++.+.+. . + . .+.+.++|.|+.+++++++++++...+ +....+. +++|.+
T Consensus 228 ~~~~~~~~~~-~~~~p~~l~~~~~~~-~-~----~---~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~ 297 (473)
T 3rja_A 228 KGIEAVEDYA-RWVAPREVNFRIGDY-G-A----G---NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIE 297 (473)
T ss_dssp HHHHHHHHHH-HHTCCTTEEEEEEES-S-S----S---CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHH
T ss_pred HHHHHHHHHh-hhCCChhHEEEEEEc-C-C----C---cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHH
Confidence 8999999998 7 8999998877765 1 1 1 156678999999999888886543332 2445667 899999
Q ss_pred HHHhhcCCCCCCchhhhccCCCCCCccceeccccccCCCCHhHHHHHHHHHHHc-C-----ceEEEEeecCc---ccCCC
Q 040700 327 SVLFWFDQPIGTPLEVLLNRIPKSQVSLKRKSDYVQEPIPKTGLESIWKLMIEL-G-----EVGMQWNPYGG---IMSEI 397 (512)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~-~-----~~~i~~~~~GG---av~~v 397 (512)
...++.... ..+.... . ....++.|+.+. +++++++++.+++.+.+. + .+.++++++|| +++++
T Consensus 298 ~~~~~~~~~---~~~~~~~--~-~~~~~~~ks~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v 370 (473)
T 3rja_A 298 SVLSYSNFD---HVDFITP--Q-PVENFYAKSLTL-KSIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKV 370 (473)
T ss_dssp HHHHTSSSS---CCCCSSC--C-CCBEEEEEEEEE-SCCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGS
T ss_pred HHHhhhcCC---CcccccC--C-CCCcceEecccc-CCCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCC
Confidence 776654211 1111100 0 134567888875 469999999999988652 1 13577899998 67889
Q ss_pred CCCCCCCcccCCceeEEEEeeccCCCChhhhHHHHHHHHHHHHhhcccccCCCCccccccCCccCCCCCCCCccccchhh
Q 040700 398 PATETPFPHRAGNIFKIQYSANWNQPGIEVTNRYLNLTRTFYEAMTPYVSKNPREAFLNYRDIDIGSNTNGTYEEGKIYG 477 (512)
Q Consensus 398 ~~~~tAfp~R~~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~p~~~~~~~g~Y~Ny~d~~l~~~~~~~~~~~~~w~ 477 (512)
+.++|||+||+ +.|.+++...|.+.. +.+++..+|++++++.+.+.....+.|+|+||+|.+++ .++|+
T Consensus 371 ~~~~TAf~hR~-~~~~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~---------~~~~~ 439 (473)
T 3rja_A 371 TNAETAYPHRD-KLWLIQFYDRYDNNQ-TYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD---------RDYAT 439 (473)
T ss_dssp CTTTSSCCCTT-CSEEEEEEEEECTTS-CCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC---------HHHHH
T ss_pred CCCCCccccCC-ccEEEEEEEEeCCCC-ccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc---------chhHH
Confidence 99999999999 689999888996411 22344567777777766444322235899999998863 13699
Q ss_pred hhcccccHHHHHHhhhccCCCCCCcCCCCCCCC
Q 040700 478 IKYFKNNFDRLVRVKTSVDPDNFFTYEQSIPIS 510 (512)
Q Consensus 478 ~~yyG~ny~RL~~iK~kyDP~nvF~~~qsI~p~ 510 (512)
+.|||+||+||++||+||||+|+|+++|||+|.
T Consensus 440 ~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~ 472 (473)
T 3rja_A 440 KVYYGENLARLQKLKAKFDPTDRFYYPQAVRPV 472 (473)
T ss_dssp HHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC
T ss_pred HHHHHHHHHHHHHHhhccCchhhCCCCcCCCCC
Confidence 999999999999999999999999999999985
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=5.2e-73 Score=605.82 Aligned_cols=445 Identities=20% Similarity=0.322 Sum_probs=344.6
Q ss_pred ccccceEEcCCCcccHHHHhhcccccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcccCC
Q 040700 36 IAISEAIYTSSNASFSSVLQSYVRNLRFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVSNV 115 (512)
Q Consensus 36 ~~~~~~v~~p~d~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~ 115 (512)
..+.+.|++|+|+.|+++++ .||.|| ...|.+||+|+|++||+++|++|+++++|+++||||||+.+.+...+
T Consensus 6 ~s~~~~~~~p~~~~y~~~~~--~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~- 78 (501)
T 3pop_A 6 ASVPPFTVGREDPRYIELSH--SDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR- 78 (501)
T ss_dssp ---CCEEEETTSTTHHHHTC--CSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC-
T ss_pred ccCCCceECCCCcchHHHHH--HHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC-
Confidence 34678899999999999864 566666 46899999999999999999999999999999999999998876543
Q ss_pred CeEEEEecCCccEEEeCCCCeEEEecCcc--------c-ccccccCccCCCCccccccccCCCCCCccccccchhhheee
Q 040700 116 PFVILDMFNLRSINISLTDETAWVQAGAT--------A-SKIHGFPAGVCPTLGVGGHFSGGGYGNMMRKFGLSVDNIVD 186 (512)
Q Consensus 116 ~g~vIdl~~l~~i~~d~~~~~v~v~~G~~--------~-~~g~~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~ 186 (512)
++++|||++||+|++|++.++++||+|++ . .+|+.++.|.|++|||||+++|||+|+++++||+++|+|++
T Consensus 79 ~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~ 158 (501)
T 3pop_A 79 RDLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWNAALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHA 158 (501)
T ss_dssp CSEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHSBCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEE
T ss_pred CEEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcCeEeCCCCCCCceEeeccccCCCcccccccccHHHhEEE
Confidence 48999999999999999999999999998 2 46999999999999999999999999999999999999999
Q ss_pred EEEEe--cCCe--EEe----ccCCCchhHHHHhhcCCCceEEEEEEEEEE----------EecC-ceEEEEEEEecccc-
Q 040700 187 AQIVD--VQGR--ILD----RKSMGEDLFWAIRGGGAASFCVILSWKIKL----------VQVP-ETVTVFRVVKTLEQ- 246 (512)
Q Consensus 187 ~~vV~--a~G~--~v~----~~~~~~dLfwa~rG~g~g~fGvvt~~~~~l----------~p~~-~~~~~~~~~~~~~~- 246 (512)
+|||+ +||+ ++. ++.+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|+...
T Consensus 159 ~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~ 238 (501)
T 3pop_A 159 VEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMI 238 (501)
T ss_dssp EEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGC
T ss_pred EEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhc
Confidence 99999 8999 443 246789999999999668999999999999 6654 35666666666432
Q ss_pred ---hHHHHHHHHHHHHhc--cCCcCc--eEEEEEeeecCCCCCCceEEEEEEEEEeCCHHHHHHHHHhhCCc----CC--
Q 040700 247 ---GATDLVAKWQQVAAD--KLDQDL--FIRLFINAVNGSKEGEKTVKVSFVAMFLGQTEKLLSLMKQSFPE----LG-- 313 (512)
Q Consensus 247 ---~~~~~~~~~~~~~~~--~~p~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~----~~-- 313 (512)
.+.+++..|+++. . ..|++. .+...+...+. ..+ .+.+..+|.|+.+++.+++++.+.. ++
T Consensus 239 ~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~ 312 (501)
T 3pop_A 239 DETSFVTVMRRFFEWH-ERHSEPGSPESSLFATFFVNHV-SSG----VLQLMVQQDADVDPEGEILARFVASLTEGTGVV 312 (501)
T ss_dssp CHHHHHHHHHHHHHHH-HHSCCTTCGGGGEEEEEEEECG-GGC----EEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCC
T ss_pred CHHHHHHHHHHHHHHH-hhccCCCccccceEEEEEecCC-CCC----eEEEEEEEeCChHHHHHHHHHHHHhhhhccCCC
Confidence 2357778888876 3 355542 23222222210 111 2445567788876655555543321 22
Q ss_pred CCcccceecchHHHHHhhcCCCCCCchhhhccCCCCCCccceeccccccCCCCHhHHHHHHHHHHHc---CceEEEEeec
Q 040700 314 IQKKDCFEMRWVESVLFWFDQPIGTPLEVLLNRIPKSQVSLKRKSDYVQEPIPKTGLESIWKLMIEL---GEVGMQWNPY 390 (512)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~---~~~~i~~~~~ 390 (512)
+... +.+++|.+...++. .+.+. .. ...++|.|+.++.+++++++++.+++.+.+. +.+.++++++
T Consensus 313 p~~~-~~~~~~~~~~~~~~-~~~~~--~~-------~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 381 (501)
T 3pop_A 313 GIPR-GGVMSWLTGTRYMS-QADCG--DV-------MGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSY 381 (501)
T ss_dssp CEEE-EEEEEHHHHHHHTC-BCSCG--GG-------TTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEEC
T ss_pred ccce-eEEeCHHHHHhhhc-CCCCC--cc-------cccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEec
Confidence 2223 67889988665432 11100 00 1235678899988889999999999988653 2467889999
Q ss_pred CcccCCCCCCCCCCcccCCceeEEEEeeccCCCChhhhHHHHHHHHHHHHhhccccc------CCCCccccccCCccCCC
Q 040700 391 GGIMSEIPATETPFPHRAGNIFKIQYSANWNQPGIEVTNRYLNLTRTFYEAMTPYVS------KNPREAFLNYRDIDIGS 464 (512)
Q Consensus 391 GGav~~v~~~~tAfp~R~~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~p~~~------~~~~g~Y~Ny~d~~l~~ 464 (512)
||++++++.++|||+||+ +.|++++...|.++ +.++++++|++++++.|.++.. +.+.|+|+||+|.+++.
T Consensus 382 GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~ 458 (501)
T 3pop_A 382 GGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDA--ELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLD 458 (501)
T ss_dssp CGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGC
T ss_pred CcccccCCCCCCCccCcC-ccEEEEEEEEeCCc--chHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccccc
Confidence 999999999999999998 68999999999765 4567788999999999976532 12468999999998763
Q ss_pred CCCCCccccchhhhhcccccHHHHHHhhhccCCCCCCcCCCCCCC
Q 040700 465 NTNGTYEEGKIYGIKYFKNNFDRLVRVKTSVDPDNFFTYEQSIPI 509 (512)
Q Consensus 465 ~~~~~~~~~~~w~~~yyG~ny~RL~~iK~kyDP~nvF~~~qsI~p 509 (512)
++++. .+..|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 459 ~~~~~--~~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 459 PARNR--SGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp TTTCC--SSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ccccc--ccchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 22211 12349999999999999999999999999999999997
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=5.6e-69 Score=578.77 Aligned_cols=450 Identities=23% Similarity=0.365 Sum_probs=336.8
Q ss_pred HHhhhhhccCCCccccceEEcCCCcccHHHHhhcccccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecc
Q 040700 24 FLQCLSMQSQSSIAISEAIYTSSNASFSSVLQSYVRNLRFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGG 103 (512)
Q Consensus 24 ~~~c~~~~~~~~~~~~~~v~~p~d~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggG 103 (512)
..+||... .+.|++|+|+.|++++ ...||.||. ..|.+||+|+|++||+++|++|+++++||.+||||
T Consensus 23 ~~~~l~~~-------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggG 90 (523)
T 2wdx_A 23 GERCLPPA-------GPVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGG 90 (523)
T ss_dssp ---CCCCC-------CCEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSC
T ss_pred chhhcccC-------CCeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCC
Confidence 34898875 4568999999999987 246788884 48999999999999999999999999999999999
Q ss_pred cCCCCCCcccCCCeEEEEecCCccEEEeCCCCeEEEecCcc--------c-ccccccCccCCCCccccccccCCCCCCcc
Q 040700 104 HDYDGLSYVSNVPFVILDMFNLRSINISLTDETAWVQAGAT--------A-SKIHGFPAGVCPTLGVGGHFSGGGYGNMM 174 (512)
Q Consensus 104 h~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~--------~-~~g~~~~~G~~~~vgvgG~~~gGg~g~~s 174 (512)
||+.+.+...+ ++++|||++||+|++|+++++++||+|++ . ++|+.++.|.|++|||||+++|||+|+++
T Consensus 91 h~~~g~~~~~~-~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g~~s 169 (523)
T 2wdx_A 91 HCFEDFVDNPD-VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWNVTIPGGVCGGVGVGGHICGGGYGPLS 169 (523)
T ss_dssp CCSSSSSSSTT-CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHSCCCCCCCCTTCBHHHHHHHTCCCTTH
T ss_pred CCCCCCccCCC-CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcCeEEccCCCCCCeeCccccCCCCCccc
Confidence 99998776532 38999999999999999999999999998 4 48999999999999999999999999999
Q ss_pred ccccchhhheeeEEEEecC--CeEEe---ccC-CCch--hHHHHhhcCCCceEEEEEEEEEE-----------EecCc-e
Q 040700 175 RKFGLSVDNIVDAQIVDVQ--GRILD---RKS-MGED--LFWAIRGGGAASFCVILSWKIKL-----------VQVPE-T 234 (512)
Q Consensus 175 ~~~G~~~D~v~~~~vV~a~--G~~v~---~~~-~~~d--Lfwa~rG~g~g~fGvvt~~~~~l-----------~p~~~-~ 234 (512)
++||+++|+|+++|||++| |+++. +.. +|+| ||||+||||+|+|||||+++||+ +|.|+ .
T Consensus 170 ~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~ 249 (523)
T 2wdx_A 170 RQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPAT 249 (523)
T ss_dssp HHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSE
T ss_pred ccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCccc
Confidence 9999999999999999955 99742 332 4555 99999987768999999999999 99876 4
Q ss_pred EEEEEEEeccc----chHHHHHHHHHHHHhcc--CCcCc--eEEEEEeeecCCCCCCceEEEEEEEEEeCCHHHHHHHHH
Q 040700 235 VTVFRVVKTLE----QGATDLVAKWQQVAADK--LDQDL--FIRLFINAVNGSKEGEKTVKVSFVAMFLGQTEKLLSLMK 306 (512)
Q Consensus 235 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~p~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~ 306 (512)
+..+.+.|+.. +...++++.|+++. .. .|++. .+...+...+. ..+...+.+.+..+|.|+.++..+.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~g~~~~~~~~l~ 327 (523)
T 2wdx_A 250 LLTSTVTFDWAGMTEAAFSRLLRNHGEWY-ERNSGPDSPYTGLWSQLMIGNE-VPGMGESGFMMPIQVDATRPDARRLLD 327 (523)
T ss_dssp EEEEEEECCGGGCCHHHHHHHHHHHHHHH-HHSCSTTCGGGGEEEEEEEECC-CTTCTTCSEEEEEEEETTSTTHHHHHH
T ss_pred EEEEEEEecccccCHHHHHHHHHHHHHHH-hhcCCCCccccceEEEEEeccC-CCCCcceeEEEEEEEeCCHHHHHHHHH
Confidence 55666666542 22357788888876 43 46552 22222222111 112101234556678888766666655
Q ss_pred hhCC---c-CC-CCcccceecchHHHHHhhcCCCCCCchhhhccCCCCCCccceeccccccCCCCHhHHHHHHHHHHHc-
Q 040700 307 QSFP---E-LG-IQKKDCFEMRWVESVLFWFDQPIGTPLEVLLNRIPKSQVSLKRKSDYVQEPIPKTGLESIWKLMIEL- 380 (512)
Q Consensus 307 ~~~~---~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~- 380 (512)
+.+. + ++ +....+..++|.+....+ .. . ..+++.++.++.++++.+.+..+++.+...
T Consensus 328 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 391 (523)
T 2wdx_A 328 AHIEAVIDGVPPAEVPEPIEQRWLASTPGR-------------GG-R--GPASKTKAGYLRKRLTDRQIQAVYENMTHMD 391 (523)
T ss_dssp HHHHHHHTTCTTCBCCCCEEEETTSSCCCC-------------CS-S--CCEEEEEEEEESSCCCHHHHHHHHHHHTCCT
T ss_pred HHHHHHHhhcCCCccccceeccHHHHHHhh-------------cC-C--CCceeeecccccCCCCHHHHHHHHHHHHhcC
Confidence 4322 1 23 222334455665421110 00 0 113456777776668888898898887643
Q ss_pred --CceEEEEeecCcccCCCCCCCCCCcccCCceeEEEEeeccCCCChhhhHHHHHHHHHHHHhhc------ccccCCCCc
Q 040700 381 --GEVGMQWNPYGGIMSEIPATETPFPHRAGNIFKIQYSANWNQPGIEVTNRYLNLTRTFYEAMT------PYVSKNPRE 452 (512)
Q Consensus 381 --~~~~i~~~~~GGav~~v~~~~tAfp~R~~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~------p~~~~~~~g 452 (512)
+.+.+.++.+||++++++.++|||+||+ ..+++++...|.++ +.++...+|++++++.+. |+......|
T Consensus 392 ~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g 468 (523)
T 2wdx_A 392 GIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANP--GNEAKHLTWVRKLYADVYAETGGVPVPNDVSDG 468 (523)
T ss_dssp TCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSG--GGHHHHHHHHHHHHHHHTGGGTTSCCSCSSBCC
T ss_pred CCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCC--ccHHHHHHHHHHHHHHHHhhhcCCCccCCCCCc
Confidence 2356778899999999999999999999 68889999999865 456778899999999887 431111358
Q ss_pred cccccCCccCCCCCCCCccccchhhhhcccccHHHHHHhhhccCCCCCCcCCCCCCC
Q 040700 453 AFLNYRDIDIGSNTNGTYEEGKIYGIKYFKNNFDRLVRVKTSVDPDNFFTYEQSIPI 509 (512)
Q Consensus 453 ~Y~Ny~d~~l~~~~~~~~~~~~~w~~~yyG~ny~RL~~iK~kyDP~nvF~~~qsI~p 509 (512)
+|+||+|.+++.+++|. ....|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 469 ~Y~Ny~d~~~~~~~~~~--s~~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 469 AYINYPDSDLADPGLNT--SGVPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp CCTTSCCGGGGCTTTCC--SSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ceecCCccccccccccc--chhHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 99999999864221110 01139999999999999999999999999999999987
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.1e-67 Score=568.97 Aligned_cols=456 Identities=22% Similarity=0.342 Sum_probs=333.4
Q ss_pred ccccccHHhhhhhccCCCccccceEEcCCCcccHHHHhhcccccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeE
Q 040700 18 ASVEENFLQCLSMQSQSSIAISEAIYTSSNASFSSVLQSYVRNLRFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQI 97 (512)
Q Consensus 18 ~~~~~~~~~c~~~~~~~~~~~~~~v~~p~d~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~ 97 (512)
.....+...|+... ...|++|+|+.|++++ ...||.||. ..|.+||+|+|++||+++|++|+++++|+
T Consensus 15 ~~~~~~~~~~~~~~-------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~ 82 (521)
T 2ipi_A 15 TIWEFDGGACGART-------ALVKVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRI 82 (521)
T ss_dssp ---------------------CCCEEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCE
T ss_pred hhhhccccccccCC-------CCeEECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeE
Confidence 34556777888875 3468999999999987 246788884 48999999999999999999999999999
Q ss_pred EEeecccCCCCCCcccCCCeEEEEecCCccEEEeCCCCeEEEecCcc--------c-ccccccCccCCCCccccccccCC
Q 040700 98 RIRSGGHDYDGLSYVSNVPFVILDMFNLRSINISLTDETAWVQAGAT--------A-SKIHGFPAGVCPTLGVGGHFSGG 168 (512)
Q Consensus 98 ~v~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~--------~-~~g~~~~~G~~~~vgvgG~~~gG 168 (512)
.|||||||+.+.+.... ++++|||++||+|++|+++++|+||+|++ . ++|+.++.|.|++|||||+++||
T Consensus 83 ~vrggGh~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gG 161 (521)
T 2ipi_A 83 AVRSGGHCFEGFVDDPA-VRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWGVTIPAGVCPQVGVGGHVLGG 161 (521)
T ss_dssp EEESSCCCTTCGGGCTT-CCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHSBCCCCCSCTTCBHHHHTTTT
T ss_pred EEECCCcCCCCCcccCC-CeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcCceeCCCCCCCcccCCcccCC
Confidence 99999999998765332 38999999999999999999999999998 3 58999999999999999999999
Q ss_pred CCCCccccccchhhheeeEEEEecC--CeEE--e-ccC-CCc--hhHHHHhhcCCCceEEEEEEEEEE-----------E
Q 040700 169 GYGNMMRKFGLSVDNIVDAQIVDVQ--GRIL--D-RKS-MGE--DLFWAIRGGGAASFCVILSWKIKL-----------V 229 (512)
Q Consensus 169 g~g~~s~~~G~~~D~v~~~~vV~a~--G~~v--~-~~~-~~~--dLfwa~rG~g~g~fGvvt~~~~~l-----------~ 229 (512)
|+|+++++||+++|+|+++|||++| |+++ . +.. +++ |||||+||||+|+|||||+++||+ +
T Consensus 162 g~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~ 241 (521)
T 2ipi_A 162 GYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLL 241 (521)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSS
T ss_pred CCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCccccc
Confidence 9999999999999999999999977 9864 2 322 445 599999997668999999999999 9
Q ss_pred ecCc-eEEEEEEEecccc----hHHHHHHHHHHHHhcc--CCcC--ceEEEEEeeecCCCCCCceEEEEEEEEEeCCHHH
Q 040700 230 QVPE-TVTVFRVVKTLEQ----GATDLVAKWQQVAADK--LDQD--LFIRLFINAVNGSKEGEKTVKVSFVAMFLGQTEK 300 (512)
Q Consensus 230 p~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ 300 (512)
|.|+ .+..+.+.|+... ...++++.|+++. .. .|++ ..+...+...+. ..+ .+.+...|.|+.++
T Consensus 242 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~p~~~~~~l~~~~~~~~~-~~~----~~~~~~~~~g~~~~ 315 (521)
T 2ipi_A 242 PKAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAWH-QSNSAAGTPYASMHSVFYLNSR-AAG----QILLDIQIDGGLDG 315 (521)
T ss_dssp CBCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHH-HHSCSSSSGGGGCEEEEEEECT-TSC----EEEEEEEEETTSTT
T ss_pred CCCCceEEEEEEEecccccCHHHHHHHHHHHHHHH-HhccCCCccccceEEEEEeccC-CCC----ceEEEEEeccCHHH
Confidence 8875 3555566665421 2357788888876 33 4554 122222222211 111 23445568888766
Q ss_pred HHHHHHhhCC---c-CC-CCcccceecchHHHHHhhcCCCCCCchhhhccCCCCCCccceeccccccCCCCHhHHHHHHH
Q 040700 301 LLSLMKQSFP---E-LG-IQKKDCFEMRWVESVLFWFDQPIGTPLEVLLNRIPKSQVSLKRKSDYVQEPIPKTGLESIWK 375 (512)
Q Consensus 301 ~~~~l~~~~~---~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~ 375 (512)
..+.+++.+. + ++ +....+..++|.+......... .. ..+++.++.++.++++.+.+.++++
T Consensus 316 ~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~~s~~~~~~~~~~~i~~~~~ 382 (521)
T 2ipi_A 316 AEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFDT------------GG-FDRTKSKGAYLRKPWTAAQAATLYR 382 (521)
T ss_dssp HHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCCC------------TT-CCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCCC------------CC-CccceeeccccccCCCHHHHHHHHH
Confidence 6655554321 1 23 2233445678877543221100 00 0234556777766788888999999
Q ss_pred HHHHcC--ceEEEEeecCcccCCCCCCCCCCcccCCceeEEEEeeccCCCChhhhHHHHHHHHHHHHhhc------cccc
Q 040700 376 LMIELG--EVGMQWNPYGGIMSEIPATETPFPHRAGNIFKIQYSANWNQPGIEVTNRYLNLTRTFYEAMT------PYVS 447 (512)
Q Consensus 376 ~~~~~~--~~~i~~~~~GGav~~v~~~~tAfp~R~~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~------p~~~ 447 (512)
.+.+.+ .+.+.++.+||++++++.++|||+||+ +.+++++...|.++ +.+++..+|++++++.+. |+..
T Consensus 383 ~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~g~p~~~ 459 (521)
T 2ipi_A 383 HLSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDP--AHDDANLAWIREIYREIFATTGGVPVPD 459 (521)
T ss_dssp HHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTTTTTSSCCSS
T ss_pred HHHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCC--CchHHHHHHHHHHHHHHHhhhcCCCccc
Confidence 887643 366788999999999998999999998 68889999999865 456677899999999987 3210
Q ss_pred CCCCccccccCCccCCCCCCCCccccchhhhhcccccHHHHHHhhhccCCCCCCcCCCCCCCC
Q 040700 448 KNPREAFLNYRDIDIGSNTNGTYEEGKIYGIKYFKNNFDRLVRVKTSVDPDNFFTYEQSIPIS 510 (512)
Q Consensus 448 ~~~~g~Y~Ny~d~~l~~~~~~~~~~~~~w~~~yyG~ny~RL~~iK~kyDP~nvF~~~qsI~p~ 510 (512)
....|+|+||+|.+++.++++. ....|++.|||+||+||++||+||||+|||+++|||+|.
T Consensus 460 ~~~~g~Y~Ny~d~~~~~~~~~~--~~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 460 DRTEGTFINYPDVDLVDERWNT--SGVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SSBCCCCTTSCCGGGGCTTTSC--CSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred CCCCceEeCCCCcccccccccc--chhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 0135899999999864211110 112499999999999999999999999999999999984
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=9.2e-68 Score=569.75 Aligned_cols=461 Identities=23% Similarity=0.366 Sum_probs=333.9
Q ss_pred ccHHhhhhhccCCCc-cccceEEcCCCcccHHHHhhcccccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEe
Q 040700 22 ENFLQCLSMQSQSSI-AISEAIYTSSNASFSSVLQSYVRNLRFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIRIR 100 (512)
Q Consensus 22 ~~~~~c~~~~~~~~~-~~~~~v~~p~d~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ 100 (512)
-+++.|.+....... .-...|++|+|+.|+++++ .||.||. ..|.+||+|+|++||+++|++|+++++||++|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~v~~p~~~~Y~~~~~--~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ 88 (530)
T 2y3s_A 15 YDIPTTENLYFQGSEFMKHIDSVAPGDIRYEDLRR--GENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVR 88 (530)
T ss_dssp -------------------CCEECTTSTTHHHHTC--CSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccchhHHHHHhhhhhccCCceEECCCCccHHHHHh--Hhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEE
Confidence 356777776432211 1134689999999999864 5677774 48999999999999999999999999999999
Q ss_pred ecccCCCCCCcccCCCeEEEEecCCccEEEeCCCCeEEEecCcc--------c-ccccccCccCCCCccccccccCCCCC
Q 040700 101 SGGHDYDGLSYVSNVPFVILDMFNLRSINISLTDETAWVQAGAT--------A-SKIHGFPAGVCPTLGVGGHFSGGGYG 171 (512)
Q Consensus 101 ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~--------~-~~g~~~~~G~~~~vgvgG~~~gGg~g 171 (512)
|||||+.+.+.... ++++|||++|++|++|+++++|+||+|++ . .+|+.++.|.|++||+||+++|||+|
T Consensus 89 ggGh~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g 167 (530)
T 2y3s_A 89 SGGHCYEDFVANSD-VRVVMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWGVTLPGGACPDVGAGGHILGGGYG 167 (530)
T ss_dssp SSCCCSSSTTTCTT-CCEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHSCCCCCCSCTTCBHHHHHHTTCCC
T ss_pred CCCCCCCCCcccCC-CeEEEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcCeEEeCCCCCCCCcCCCcCCCCCC
Confidence 99999998765432 38999999999999999999999999998 3 37999999999999999999999999
Q ss_pred CccccccchhhheeeEEEEec--CCeEE--e-ccC-CCc--hhHHHHhhcCCCceEEEEEEEEEE------------Eec
Q 040700 172 NMMRKFGLSVDNIVDAQIVDV--QGRIL--D-RKS-MGE--DLFWAIRGGGAASFCVILSWKIKL------------VQV 231 (512)
Q Consensus 172 ~~s~~~G~~~D~v~~~~vV~a--~G~~v--~-~~~-~~~--dLfwa~rG~g~g~fGvvt~~~~~l------------~p~ 231 (512)
+++++||+++|+|+++|||++ +|+++ + +.+ +|+ |||||+||||+|+|||||+++||+ +|.
T Consensus 168 ~~s~~~G~~~D~v~~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~ 247 (530)
T 2y3s_A 168 PLSRMHGSIVDYLHAVEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPR 247 (530)
T ss_dssp TTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCC
T ss_pred cccccccchhhheeeEEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCC
Confidence 999999999999999999995 59974 2 332 455 599999998668999999999999 888
Q ss_pred Cc-eEEEEEEEeccc----chHHHHHHHHHHHHhcc--CCcCc--eEEEEEeeecCCCCCCceEEEEEEEEEeCCHHHHH
Q 040700 232 PE-TVTVFRVVKTLE----QGATDLVAKWQQVAADK--LDQDL--FIRLFINAVNGSKEGEKTVKVSFVAMFLGQTEKLL 302 (512)
Q Consensus 232 ~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~p~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~ 302 (512)
++ .+..+.+.|+.. +...++++.|+++. .. .|++. .....+...+ .... .+.+...|.|+.++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~p~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~g~~~~~~ 321 (530)
T 2y3s_A 248 PPAEVLLNTTVWPWEGLDEAAFARLVRNHGRWF-EQNSGPDSPWCDLYSVLALTR---SQSG--ALAMTTQLDATGPDAE 321 (530)
T ss_dssp CCSEEEEEEEEEESTTCCHHHHHHHHHHHHHHH-HHSCSTTCGGGGEEEEEEEEC---GGGS--EEEEEEEEECCSTTHH
T ss_pred CCceEEEEEEEecccccCHHHHHHHHHHHHHHh-hhcCCCCcccceeEEEEEecc---CCCC--cEEEEEEEeCCHHHHH
Confidence 75 455556666542 22356788888876 33 45542 2222222221 1111 2344556888876666
Q ss_pred HHHHhhCC---c-CC-CCcccceecchHHHHHhhcCCCCCCchhhhccCCCCCCccceeccccccCCCCHhHHHHHHHHH
Q 040700 303 SLMKQSFP---E-LG-IQKKDCFEMRWVESVLFWFDQPIGTPLEVLLNRIPKSQVSLKRKSDYVQEPIPKTGLESIWKLM 377 (512)
Q Consensus 303 ~~l~~~~~---~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~ 377 (512)
+.+++.+. . ++ +....+..++|.+..........+ . .. .+++.++.++.++++++.++.+++.+
T Consensus 322 ~~l~p~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~-~r~~~~s~~~~~~~~~~~i~~~~~~~ 390 (530)
T 2y3s_A 322 KRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWPGIAGDG--------D--MT-GRAKIKAAYARRSFDDRQIGTLYTRL 390 (530)
T ss_dssp HHHHHHHHHHHTTCSSCCEEEEEEEEHHHHTTCHHHHCCC--------C--CC-SEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCccceeeeccHHHHHHhhcCCCCC--------c--cc-ccceeeccccccCCCHHHHHHHHHHH
Confidence 66554321 1 23 223345667887743322110000 0 01 24566777877678889999999888
Q ss_pred HHcC----ceEEEEeecCcccCCCCCCCCCCcccCCceeEEEEeeccCCCChhhhHHHHHHHHHHHHhhc------cccc
Q 040700 378 IELG----EVGMQWNPYGGIMSEIPATETPFPHRAGNIFKIQYSANWNQPGIEVTNRYLNLTRTFYEAMT------PYVS 447 (512)
Q Consensus 378 ~~~~----~~~i~~~~~GGav~~v~~~~tAfp~R~~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~------p~~~ 447 (512)
.+.+ .+.+.++++||++++++.++|||+||+ +.+++++...|.++ +.+++..+|++++++.+. |+..
T Consensus 391 ~~~~~~~~~~~~~~~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~l~~~~~g~p~~~ 467 (530)
T 2y3s_A 391 TSTDYDNPAGVVALIAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDP--AQDPVHVRWIRELYRDVYADTGGVPVPG 467 (530)
T ss_dssp HCSSSCCTTCEEEEEECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCT--TCHHHHHHHHHHHHHHHTGGGTTSCCTT
T ss_pred HhcCCCCCceEEEEEecCCccccCCCCcCcccccc-cceeEEEEEecCCC--cchHHHHHHHHHHHHHHHhhhcCCCccc
Confidence 6531 366788999999999999999999998 68899999999866 345677899999999887 3311
Q ss_pred CCCCccccccCCccCCCCCCCCccccchhhhhcccccHHHHHHhhhccCCCCCCcCCCCCCCCC
Q 040700 448 KNPREAFLNYRDIDIGSNTNGTYEEGKIYGIKYFKNNFDRLVRVKTSVDPDNFFTYEQSIPISP 511 (512)
Q Consensus 448 ~~~~g~Y~Ny~d~~l~~~~~~~~~~~~~w~~~yyG~ny~RL~~iK~kyDP~nvF~~~qsI~p~~ 511 (512)
....|+|+||+|.+++.+++|. ....|++.|||+||+||++||+||||+|||+++|+|+|.|
T Consensus 468 ~~~~g~Y~Ny~d~~~~~~~~~~--s~~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~~ 529 (530)
T 2y3s_A 468 GAADGAYVNYPDVDLADEEWNT--SGVPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVPP 529 (530)
T ss_dssp TTBCCCCTTSCCGGGGCTTTCC--SSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred CCCCceEeCCcCcccccccccc--chhHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCCC
Confidence 1135899999999865221111 0124999999999999999999999999999999999865
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=6e-67 Score=561.18 Aligned_cols=448 Identities=21% Similarity=0.423 Sum_probs=341.5
Q ss_pred cccccHHhhhhhccCCCccccceEEcCCCcccHHHHhhcccccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEE
Q 040700 19 SVEENFLQCLSMQSQSSIAISEAIYTSSNASFSSVLQSYVRNLRFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIR 98 (512)
Q Consensus 19 ~~~~~~~~c~~~~~~~~~~~~~~v~~p~d~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 98 (512)
...+.|.+|+.... ..++.|+++.|+.... +|+......|.+||+|+|++||+++|++|+++++|+.
T Consensus 4 ~~~~~l~~~l~~~~-------~~~~~~~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 70 (503)
T 1zr6_A 4 AEFNSINACLAAAD-------VEFHEEDSEGWDMDGT------AFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQIS 70 (503)
T ss_dssp CTTCHHHHHHHHTT-------CEECCTTSHHHHHHTS------CSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHhhCcCC-------ceecCCCccchHHHhh------hhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEE
Confidence 35567999998642 3578999999998632 3554455699999999999999999999999999999
Q ss_pred EeecccCCCCCCcccCCCeEEEEecCCccEEEeCCCCeEEEecCcc--------ccc-ccccCccCCCCccccccccCCC
Q 040700 99 IRSGGHDYDGLSYVSNVPFVILDMFNLRSINISLTDETAWVQAGAT--------ASK-IHGFPAGVCPTLGVGGHFSGGG 169 (512)
Q Consensus 99 v~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~--------~~~-g~~~~~G~~~~vgvgG~~~gGg 169 (512)
+||||||+.+.+.+..+++++|||++||+|++| ++++++||+|++ ..+ |+.+|.|.|++|||||+++|||
T Consensus 71 v~ggGh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~gl~~~~G~~~~vgvgG~~~gGg 149 (503)
T 1zr6_A 71 AKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQGNRALSHGTCPAVGVGGHVLGGG 149 (503)
T ss_dssp EESSCCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTTSEECCCCSCTTSBHHHHHHHCC
T ss_pred EECCCcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcCCEEeCCCCCCcCchhhhhcCCC
Confidence 999999999866541124899999999999999 888999999998 234 6999999999999999999999
Q ss_pred CCCccccccchhhheeeEEEEecCCeEEe-ccCCCchhHHHHhhcCCCceEEEEEEEEEEEecCceEEEEEEEeccc-ch
Q 040700 170 YGNMMRKFGLSVDNIVDAQIVDVQGRILD-RKSMGEDLFWAIRGGGAASFCVILSWKIKLVQVPETVTVFRVVKTLE-QG 247 (512)
Q Consensus 170 ~g~~s~~~G~~~D~v~~~~vV~a~G~~v~-~~~~~~dLfwa~rG~g~g~fGvvt~~~~~l~p~~~~~~~~~~~~~~~-~~ 247 (512)
+|+++++||+++|+|+++|||++||++++ ++++|+|||||+|||+ |+|||||+++||++|.|+....+.+.+.+. +.
T Consensus 150 ~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~ 228 (503)
T 1zr6_A 150 YGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQ 228 (503)
T ss_dssp CSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCHHH
T ss_pred CCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCHHH
Confidence 99999999999999999999999999996 6677999999999999 699999999999999987666666666543 34
Q ss_pred HHHHHHHHHHHHhcc-CCcCceEEEEEeeecCCCCCCceEEEEEEEEEeCCHHHHHHHHHhhCCcCCC--Ccccceecch
Q 040700 248 ATDLVAKWQQVAADK-LDQDLFIRLFINAVNGSKEGEKTVKVSFVAMFLGQTEKLLSLMKQSFPELGI--QKKDCFEMRW 324 (512)
Q Consensus 248 ~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~--~~~~~~~~~~ 324 (512)
+.++++.|+++. .. +|++++..+.+.. . .+.+..+|+|+.+++.+.+++++..++. ....+..++|
T Consensus 229 ~~~~~~~~~~~~-~~~~p~~~~~~~~~~~--------~--~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~ 297 (503)
T 1zr6_A 229 HVAGLKALQDWA-QNTMPRELSMRLEINA--------N--ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDW 297 (503)
T ss_dssp HHHHHHHHHHHH-HHTCCTTBCCEEEEET--------T--EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECH
T ss_pred HHHHHHHHHHHH-hhcCChhHEEEEEEeC--------C--eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCH
Confidence 567888899987 55 8888877666542 1 3556678999998888777764333332 1233456678
Q ss_pred HHHHHhhcCCCCCCchhhhccCCCCCCccceeccccccCCCCHhHHHHHHHHHH-HcC----c-eEEEEeecCc---ccC
Q 040700 325 VESVLFWFDQPIGTPLEVLLNRIPKSQVSLKRKSDYVQEPIPKTGLESIWKLMI-ELG----E-VGMQWNPYGG---IMS 395 (512)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~-~~~----~-~~i~~~~~GG---av~ 395 (512)
.+....+.. ...... ..+...+..++.++.++.+ ++++.++.+++.+. ..+ . +.+.++++|| ++.
T Consensus 298 ~~~~~~~~~---~~~~~~--~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~ 371 (503)
T 1zr6_A 298 YGQINTYLY---GADLNI--TYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALA 371 (503)
T ss_dssp HHHHTTSCT---TCCSSC--SSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGG
T ss_pred HHHHHHHcC---CCcccc--cCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhc
Confidence 764432211 000000 0011122346677777766 88889999998887 432 1 3467889999 888
Q ss_pred CCCCCCCCCcccCCceeEEEEeecc-----CCCChhhhHHHHHHHHHHHHhhcccccCCCCccccccCCccCCCCCCCCc
Q 040700 396 EIPATETPFPHRAGNIFKIQYSANW-----NQPGIEVTNRYLNLTRTFYEAMTPYVSKNPREAFLNYRDIDIGSNTNGTY 470 (512)
Q Consensus 396 ~v~~~~tAfp~R~~~~~~~~~~~~W-----~~~~~~~~~~~~~w~~~~~~~l~p~~~~~~~g~Y~Ny~d~~l~~~~~~~~ 470 (512)
+++.++++|+||+ +.+++++...| .++ +.++...+|++++++.+.........|+|+||+|.+++
T Consensus 372 ~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~------- 441 (503)
T 1zr6_A 372 AVSNDETAYAHRD-QLWLWQFYDSIYDYENNTS--PYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT------- 441 (503)
T ss_dssp GSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCT--TTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-------
T ss_pred CCCcccCCccccc-ceeEEEEEeeeccccCCCc--cchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-------
Confidence 8888999999998 57877776666 222 12334456777666655433211123799999998742
Q ss_pred cccchhhhhcccccHHHHHHhhhccCCCCCCcCCCCCCCC
Q 040700 471 EEGKIYGIKYFKNNFDRLVRVKTSVDPDNFFTYEQSIPIS 510 (512)
Q Consensus 471 ~~~~~w~~~yyG~ny~RL~~iK~kyDP~nvF~~~qsI~p~ 510 (512)
..+|++.|||+||+||++||+||||+|||+++|+|+|.
T Consensus 442 --~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~ 479 (503)
T 1zr6_A 442 --KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPI 479 (503)
T ss_dssp --HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC
T ss_pred --cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCch
Confidence 12699999999999999999999999999999999985
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=1.2e-64 Score=538.63 Aligned_cols=428 Identities=19% Similarity=0.271 Sum_probs=324.4
Q ss_pred cceEEcCCCcccHHHHhhcccccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcccCCCeE
Q 040700 39 SEAIYTSSNASFSSVLQSYVRNLRFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVSNVPFV 118 (512)
Q Consensus 39 ~~~v~~p~d~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~g~ 118 (512)
++.|++|+|+.|+++++ +|+......|.+||+|+|++||+++|++|+++++|+.+||||||+.+.+...+ ++
T Consensus 13 ~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~~--gv 84 (459)
T 2bvf_A 13 QGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATNDG--GI 84 (459)
T ss_dssp SSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCSS--SE
T ss_pred CceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccCC--eE
Confidence 67899999999998753 36665667999999999999999999999999999999999999998775443 89
Q ss_pred EEEecCCccEEEeCCCCeEEEecCcc--------cccccccCccCCCCccccccccCCCCCCccccccchhhheeeEEEE
Q 040700 119 ILDMFNLRSINISLTDETAWVQAGAT--------ASKIHGFPAGVCPTLGVGGHFSGGGYGNMMRKFGLSVDNIVDAQIV 190 (512)
Q Consensus 119 vIdl~~l~~i~~d~~~~~v~v~~G~~--------~~~g~~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV 190 (512)
+|||++||+|++|+++.+++||+|++ .++|+.++.|.|+++||||+++|||+|+++++||+++|+|+++|||
T Consensus 85 vi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~vV 164 (459)
T 2bvf_A 85 VLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFGLAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGATLV 164 (459)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTTEEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEEEE
T ss_pred EEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcCCEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEEEE
Confidence 99999999999999999999999998 7789999999999999999999999999999999999999999999
Q ss_pred ecCCeEEe-ccCCCchhHHHHhhcCCCceEEEEEEEEEEEecCceEEEEEEEecccchHH--HHHHHHHHHHhccCCcCc
Q 040700 191 DVQGRILD-RKSMGEDLFWAIRGGGAASFCVILSWKIKLVQVPETVTVFRVVKTLEQGAT--DLVAKWQQVAADKLDQDL 267 (512)
Q Consensus 191 ~a~G~~v~-~~~~~~dLfwa~rG~g~g~fGvvt~~~~~l~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~ 267 (512)
++||++++ +..+|+|||||+|||+ |+|||||+++||++|.|+.+....+.|+.. ... ++++.|+++. ..+|+.+
T Consensus 165 ~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~ 241 (459)
T 2bvf_A 165 TATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPS-VSELAGLLTSLLDAL-NEMADHI 241 (459)
T ss_dssp CTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCC-HHHHHHHHHHHHHHH-HHTTTTC
T ss_pred cCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechH-HhhHHHHHHHHHHHH-HhCcHhh
Confidence 99999996 6667899999999998 899999999999999966555555556542 345 7888899887 6677776
Q ss_pred eEEEEEeeecCCCCCCceEEEEEEEEEeCCHHHHHHHHHhhCCcCC-CCcccceecchHHHHHhhcCCCCCCchhhhccC
Q 040700 268 FIRLFINAVNGSKEGEKTVKVSFVAMFLGQTEKLLSLMKQSFPELG-IQKKDCFEMRWVESVLFWFDQPIGTPLEVLLNR 346 (512)
Q Consensus 268 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 346 (512)
...+ .... ...+. ..+.+...|.|+.++..+.+++. .+++ .....+..++|.+...... . ....
T Consensus 242 ~~~~-~~~~--~~~~~--~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~ 306 (459)
T 2bvf_A 242 YPSV-FVGV--DENRA--PSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNA--------E-VGSF 306 (459)
T ss_dssp CCEE-EEEE--CTTCC--EEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHH--------H-HSCC
T ss_pred cccc-ccCc--ccCCC--ceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhccc--------c-cccC
Confidence 4333 2111 01122 24555678899987777777653 3343 2233456678876433211 0 0000
Q ss_pred CCCCCcccee-ccccccCCCCHhHHHHHHHHHHHcC-ce-EEEEeecCcccCCCCCCCCCCcccCCceeEEEEeeccCCC
Q 040700 347 IPKSQVSLKR-KSDYVQEPIPKTGLESIWKLMIELG-EV-GMQWNPYGGIMSEIPATETPFPHRAGNIFKIQYSANWNQP 423 (512)
Q Consensus 347 ~~~~~~~~~~-~s~~~~~~~~~~~i~~~~~~~~~~~-~~-~i~~~~~GGav~~v~~~~tAfp~R~~~~~~~~~~~~W~~~ 423 (512)
....+ .+.. ++.++.+.++.+.++.+++.+.+.+ .. ...++.+||++.+ .+.+||+||+ ..+ +.+...|.++
T Consensus 307 ~~~~~-~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~-~~~-~~~~~~w~~~ 381 (459)
T 2bvf_A 307 EDGMS-NLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRD-AMG-VLALAEWSGA 381 (459)
T ss_dssp CCSCE-EEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCS-SCE-EEEEEEECTT
T ss_pred CCCCc-ceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCC-cce-EEEEEEeCCC
Confidence 01111 2222 5666543344556666555543333 21 2333444887766 5678999999 467 8888899866
Q ss_pred ChhhhHHHHHHHHHHHHhhcccccCCCCccccccCCccCCCCCCCCccccchhhhhccccc-HHHHHHhhhccCCCCCCc
Q 040700 424 GIEVTNRYLNLTRTFYEAMTPYVSKNPREAFLNYRDIDIGSNTNGTYEEGKIYGIKYFKNN-FDRLVRVKTSVDPDNFFT 502 (512)
Q Consensus 424 ~~~~~~~~~~w~~~~~~~l~p~~~~~~~g~Y~Ny~d~~l~~~~~~~~~~~~~w~~~yyG~n-y~RL~~iK~kyDP~nvF~ 502 (512)
. ..++...+|++++++.|.|+......|+|+||+|.+. .+|++.|||+| |+||++||+||||+|+|+
T Consensus 382 ~-~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~-----------~~~~~~~yG~~n~~rL~~iK~kyDP~~vF~ 449 (459)
T 2bvf_A 382 A-PGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVT-----------AEMVAEVYKPEVYSRLAAVKREYDPENRFR 449 (459)
T ss_dssp S-TTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC-----------HHHHHHHHCHHHHHHHHHHHHHHCTTCCCC
T ss_pred c-cchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc-----------hHHHHHHhCcchHHHHHHHHHHhCcccccC
Confidence 3 1345578999999999998842112489999998762 26999999987 999999999999999999
Q ss_pred CCCCCCC
Q 040700 503 YEQSIPI 509 (512)
Q Consensus 503 ~~qsI~p 509 (512)
++|+|+|
T Consensus 450 ~~~~I~p 456 (459)
T 2bvf_A 450 HNYNIDP 456 (459)
T ss_dssp SSSCCCC
T ss_pred CCCCCCC
Confidence 9999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=4.3e-39 Score=348.09 Aligned_cols=209 Identities=20% Similarity=0.266 Sum_probs=165.7
Q ss_pred ccccHHhhhhhccCCCccccceEEcCCCcccHHHHhhcccccccCCCCCCCccEEEEcCCHHHHHHHHHHHHh--c-CCe
Q 040700 20 VEENFLQCLSMQSQSSIAISEAIYTSSNASFSSVLQSYVRNLRFATPTTLKPLVIVAAKHESHVQATVICSKK--F-GLQ 96 (512)
Q Consensus 20 ~~~~~~~c~~~~~~~~~~~~~~v~~p~d~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~--~-~~~ 96 (512)
..++|.+||..... .+.|.+ ++..+... ...|+......|.+||+|+|++||+++|++|++ + ++|
T Consensus 30 ~~~~~~~~l~~~~~-----~~~v~~-~~~~~~~~------~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~ 97 (534)
T 1w1o_A 30 RGRPWPASLAALAL-----DGKLRT-DSNATAAA------STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYT 97 (534)
T ss_dssp ----------CTTT-----TTCEEC-SHHHHHHT------SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCC
T ss_pred chHHHHHHHHhcCC-----CceEec-CHHHHHHH------hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCce
Confidence 55678888887321 345665 33334332 234666566789999999999999999999998 6 999
Q ss_pred EEEeecccCCCCCCcccCCCeEEEEecCCcc------EEEeCCCCeEEEecCcc--------cccccccCcc-CCCCccc
Q 040700 97 IRIRSGGHDYDGLSYVSNVPFVILDMFNLRS------INISLTDETAWVQAGAT--------ASKIHGFPAG-VCPTLGV 161 (512)
Q Consensus 97 ~~v~ggGh~~~g~s~~~~~~g~vIdl~~l~~------i~~d~~~~~v~v~~G~~--------~~~g~~~~~G-~~~~vgv 161 (512)
+++||||||+.|.+...+ +++|||++||+ +++|+++.+++||+|++ .++|+..+.+ .+..++|
T Consensus 98 v~~~G~G~~~~g~~~~~~--gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tv 175 (534)
T 1w1o_A 98 IAFRGRGHSLMGQAFAPG--GVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTV 175 (534)
T ss_dssp EEEESSCCCSSSTTCCTT--SEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBH
T ss_pred EEEECCCCCCCCCcCCCC--eEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCCcccCCCCCCCEEe
Confidence 999999999998877654 89999999998 48888888999999998 6788876543 3457889
Q ss_pred cccccCCCCCCccccccchhhheeeEEEEecCCeEEe-ccCCCchhHHHHhhcCCCceEEEEEEEEEEEecCceEEEEEE
Q 040700 162 GGHFSGGGYGNMMRKFGLSVDNIVDAQIVDVQGRILD-RKSMGEDLFWAIRGGGAASFCVILSWKIKLVQVPETVTVFRV 240 (512)
Q Consensus 162 gG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~~v~-~~~~~~dLfwa~rG~g~g~fGvvt~~~~~l~p~~~~~~~~~~ 240 (512)
||.+.++|+|.++++||+++|+|+++|||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+....+.+
T Consensus 176 GG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~~~~ 254 (534)
T 1w1o_A 176 GGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARWVRF 254 (534)
T ss_dssp HHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEEEEE
T ss_pred ceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEEEEE
Confidence 9999999999999999999999999999999999996 6667899999999998 7999999999999999986555555
Q ss_pred Eec
Q 040700 241 VKT 243 (512)
Q Consensus 241 ~~~ 243 (512)
.|.
T Consensus 255 ~~~ 257 (534)
T 1w1o_A 255 VYT 257 (534)
T ss_dssp EES
T ss_pred EeC
Confidence 554
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=5.7e-32 Score=291.14 Aligned_cols=180 Identities=22% Similarity=0.332 Sum_probs=155.2
Q ss_pred ccCCCCCCCccEEEEcCCHHHHHHHHHHHHh-cCCeEEEeecccCCCCCCcccCCCeEEEEecCCccEEEeC-----CC-
Q 040700 62 RFATPTTLKPLVIVAAKHESHVQATVICSKK-FGLQIRIRSGGHDYDGLSYVSNVPFVILDMFNLRSINISL-----TD- 134 (512)
Q Consensus 62 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~-~~~~~~v~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~-----~~- 134 (512)
.|+......|.+||+|+|++||+++|++|++ +++|+++||||||+.|.+...+ +++|||++||+|++|. ++
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~--gvvidl~~m~~i~i~~~~~~~~~~ 130 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG--GLVVDMSTTAENHFEVGYLSGGDA 130 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT--SEEEEGGGGTTSCEEEEECCSSSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC--EEEEECcCCCCcEEeecccCCCCC
Confidence 4665556789999999999999999999996 9999999999999998776544 8999999999987776 55
Q ss_pred -CeEEEecCcc---------cccccccCc-cCCCCccccccccCCCCCCccccccchhhheeeEEEEecCCeEEe-ccCC
Q 040700 135 -ETAWVQAGAT---------ASKIHGFPA-GVCPTLGVGGHFSGGGYGNMMRKFGLSVDNIVDAQIVDVQGRILD-RKSM 202 (512)
Q Consensus 135 -~~v~v~~G~~---------~~~g~~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~~v~-~~~~ 202 (512)
.+++||||++ .++|+..+. +.++.++|||.+.++|.|..+.+||.++|+|++++||++||++++ ...+
T Consensus 131 ~~~v~v~aGv~~~~l~~~~l~~~Gl~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~~ 210 (524)
T 2exr_A 131 TAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEIE 210 (524)
T ss_dssp SEEEEEETTCBHHHHHHHHHHHHSEECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEESSS
T ss_pred ceEEEEeCCcCHHHHHHHHHHHcCCCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECCCC
Confidence 7999999998 367887332 334568899999999999999999999999999999999999996 5557
Q ss_pred CchhHHHHhhcCCCceEEEEEEEEEEEecCceEEEEEEEecc
Q 040700 203 GEDLFWAIRGGGAASFCVILSWKIKLVQVPETVTVFRVVKTL 244 (512)
Q Consensus 203 ~~dLfwa~rG~g~g~fGvvt~~~~~l~p~~~~~~~~~~~~~~ 244 (512)
++||||++||+. |+|||||+++||++|.|+......+.|..
T Consensus 211 ~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~ 251 (524)
T 2exr_A 211 NSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTE 251 (524)
T ss_dssp SHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESC
T ss_pred ChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCC
Confidence 899999999998 89999999999999999866555555543
No 13
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.98 E-value=2.6e-30 Score=274.55 Aligned_cols=194 Identities=21% Similarity=0.226 Sum_probs=164.1
Q ss_pred ccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcccCCCeEEEEecCCccE-EEeCCCCeEEEe
Q 040700 62 RFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVSNVPFVILDMFNLRSI-NISLTDETAWVQ 140 (512)
Q Consensus 62 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~g~vIdl~~l~~i-~~d~~~~~v~v~ 140 (512)
.|+......|.+||+|+|++||+++|++|+++++|++++|||||+.|.+.... ++++|||++||+| ++|+++.+++||
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~-ggvvIdl~~m~~i~~id~~~~~v~V~ 121 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN-GEVVISLKRMDKIREIDTSSNTITVE 121 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS-SCEEEECTTCCCEEEEETTTTEEEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC-CcEEEEeeCCCceEEEcCCCCeEEEC
Confidence 47655567899999999999999999999999999999999999998776543 4899999999998 799999999999
Q ss_pred cCcc--------cccccccCc--cCCCCccccccccCCCCCCccccccchhhheeeEEEEecCCeEEe-c-----cCCCc
Q 040700 141 AGAT--------ASKIHGFPA--GVCPTLGVGGHFSGGGYGNMMRKFGLSVDNIVDAQIVDVQGRILD-R-----KSMGE 204 (512)
Q Consensus 141 ~G~~--------~~~g~~~~~--G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~~v~-~-----~~~~~ 204 (512)
||++ .++|+.++. +.+..++|||.+.+++.|..+.+||.++|+|+++|||++||++++ . ...++
T Consensus 122 aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~ 201 (476)
T 3pm9_A 122 AGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGY 201 (476)
T ss_dssp TTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSC
T ss_pred CCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCc
Confidence 9998 678988764 566678899999999999989999999999999999999999985 1 23467
Q ss_pred hhHHHHhhcCCCceEEEEEEEEEEEecCceEEEEEEEecccchHHHHHHHHHH
Q 040700 205 DLFWAIRGGGAASFCVILSWKIKLVQVPETVTVFRVVKTLEQGATDLVAKWQQ 257 (512)
Q Consensus 205 dLfwa~rG~g~g~fGvvt~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (512)
||+|+++|++ |+|||||+++||++|.|+......+.|+..+++.+++..++.
T Consensus 202 dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 202 DLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 9999999998 899999999999999998655555555543444455555544
No 14
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=99.97 E-value=7e-30 Score=281.89 Aligned_cols=189 Identities=22% Similarity=0.154 Sum_probs=160.3
Q ss_pred cCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcccC---CCeEEEEecCCccE-EEeCCCCeEE
Q 040700 63 FATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVSN---VPFVILDMFNLRSI-NISLTDETAW 138 (512)
Q Consensus 63 ~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~---~~g~vIdl~~l~~i-~~d~~~~~v~ 138 (512)
|+......|.+||+|+|++||+++|++|+++++||++||||||..|...... .++|+|||++||+| +||+++++++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 5555667999999999999999999999999999999999999876544321 24799999999997 8999999999
Q ss_pred EecCcc--------cccccccCc--cCCCCccccccccCCCCCCccccccchhhheeeEEEEecCCeEEe-----ccCCC
Q 040700 139 VQAGAT--------ASKIHGFPA--GVCPTLGVGGHFSGGGYGNMMRKFGLSVDNIVDAQIVDVQGRILD-----RKSMG 203 (512)
Q Consensus 139 v~~G~~--------~~~g~~~~~--G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~~v~-----~~~~~ 203 (512)
||||++ .++|+.++. ++....+|||++++++.|..+.+||.+.|+|+++|||++||++++ ....+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 999998 678988763 566677899999999999999999999999999999999999984 22346
Q ss_pred chhHHHHhhcCCCceEEEEEEEEEEEecCceEEEEEEEecccchHHHHH
Q 040700 204 EDLFWAIRGGGAASFCVILSWKIKLVQVPETVTVFRVVKTLEQGATDLV 252 (512)
Q Consensus 204 ~dLfwa~rG~g~g~fGvvt~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~ 252 (512)
+||+|.++|+. |+|||||+++|||+|.|+......+.|+..+++.+++
T Consensus 358 yDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av 405 (658)
T 4bby_A 358 PDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACL 405 (658)
T ss_dssp SCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHH
T ss_pred cCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccCCchhhhhhH
Confidence 89999999999 8999999999999999987665555555333333333
No 15
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.96 E-value=4.7e-29 Score=265.05 Aligned_cols=190 Identities=16% Similarity=0.190 Sum_probs=159.7
Q ss_pred ccCCCCCCCccEEEEcCCHHHHHHHHHHHHhc--CCeEEEeecccCCCCCCcccCCCeEEEEecCCccE-EEeCCCCeEE
Q 040700 62 RFATPTTLKPLVIVAAKHESHVQATVICSKKF--GLQIRIRSGGHDYDGLSYVSNVPFVILDMFNLRSI-NISLTDETAW 138 (512)
Q Consensus 62 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~--~~~~~v~ggGh~~~g~s~~~~~~g~vIdl~~l~~i-~~d~~~~~v~ 138 (512)
.|.. ....|.+|++|+|++||+++|++|+++ ++++.++|+|||+.+.+...+ |++|||++||+| ++|+++++|+
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~~--gvvIdl~~l~~i~~~d~~~~~v~ 111 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNGG--GLVIDMTPLNTIHSIDADTKLVD 111 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCTT--SEEEECTTCCCEEEEETTTTEEE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCcC--eEEEECccCCCceEEcCCCCEEE
Confidence 4754 477899999999999999999999999 799999999999987655333 899999999998 9999999999
Q ss_pred EecCcc--------cccccccCc-cCCCCccccccccCCCCCCccccccchhhheeeEEEEecCCeEEe-ccC-CCchhH
Q 040700 139 VQAGAT--------ASKIHGFPA-GVCPTLGVGGHFSGGGYGNMMRKFGLSVDNIVDAQIVDVQGRILD-RKS-MGEDLF 207 (512)
Q Consensus 139 v~~G~~--------~~~g~~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~~v~-~~~-~~~dLf 207 (512)
||||++ .++|+.++. +..+.++|||.+.+|++|..++.||..+|+|+++|||++||++++ +.. +|+|||
T Consensus 112 v~aGv~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~dLf 191 (481)
T 4feh_A 112 IDAGVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAELF 191 (481)
T ss_dssp EETTCBHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHHHH
T ss_pred EcCCccHHHHHHHHHHcCCEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChHHH
Confidence 999998 678988763 344567899999999999999999999999999999999999996 555 789999
Q ss_pred HHHhhcCCCceEEEEEEEEEEEecCceEEEEEEEecccchHHHHHHHHHH
Q 040700 208 WAIRGGGAASFCVILSWKIKLVQVPETVTVFRVVKTLEQGATDLVAKWQQ 257 (512)
Q Consensus 208 wa~rG~g~g~fGvvt~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (512)
||+|||+ |+|||||+++||++|.++...... .+.. .+..++++.|++
T Consensus 192 ~a~rgs~-G~~GIIt~~tl~l~p~~~~~~~~~-~~~~-~~l~~~~~~~~~ 238 (481)
T 4feh_A 192 WATVGGN-GLTGIIMRATIEMTPTSTAYFIAD-GDVT-ASLDETIALHSD 238 (481)
T ss_dssp HHHTTCT-TTTCEEEEEEEECEECSCSEEEEE-EEEC-SSHHHHHHHHSS
T ss_pred HHhhccC-CCceEEEEEEEEEEeCCccEEEEE-EEeC-CCHHHHHHHHHH
Confidence 9999998 899999999999999986432221 1222 235666666653
No 16
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.96 E-value=6.5e-29 Score=269.65 Aligned_cols=188 Identities=20% Similarity=0.217 Sum_probs=156.1
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcccC--CCeEEEEecCCccE-EEeCCCCeEEEecCc
Q 040700 67 TTLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVSN--VPFVILDMFNLRSI-NISLTDETAWVQAGA 143 (512)
Q Consensus 67 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~--~~g~vIdl~~l~~i-~~d~~~~~v~v~~G~ 143 (512)
....|.+||+|+|++||+++|++|+++++|++++|||||+.|.+.... +++++|||++||+| ++|+++.+++||||+
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv 213 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGI 213 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCC
Confidence 346899999999999999999999999999999999999987665421 24899999999998 899999999999999
Q ss_pred c--------cccccccCccC--CCCccccccccCCCCCCccccccchhhheeeEEEEecCCeEEe----ccCCCchhHHH
Q 040700 144 T--------ASKIHGFPAGV--CPTLGVGGHFSGGGYGNMMRKFGLSVDNIVDAQIVDVQGRILD----RKSMGEDLFWA 209 (512)
Q Consensus 144 ~--------~~~g~~~~~G~--~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~~v~----~~~~~~dLfwa 209 (512)
+ .++|+.++... ...++|||+++++++|+.+.+||.++|+|+++|||++||++++ +...++||+|+
T Consensus 214 ~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~ 293 (584)
T 2uuu_A 214 MGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHI 293 (584)
T ss_dssp BHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHH
T ss_pred cHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhh
Confidence 8 67888876543 2346899999999999999999999999999999999999875 33468999999
Q ss_pred HhhcCCCceEEEEEEEEEEEecCceEEEEEEEecccchHHHHHHHHHHH
Q 040700 210 IRGGGAASFCVILSWKIKLVQVPETVTVFRVVKTLEQGATDLVAKWQQV 258 (512)
Q Consensus 210 ~rG~g~g~fGvvt~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (512)
++|++ |+|||||+++||++|.|+....+.+.|+. ..++++.++++
T Consensus 294 ~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~---~~~a~~~~~~~ 338 (584)
T 2uuu_A 294 ILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPT---FAHAVSALQQI 338 (584)
T ss_dssp HTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESS---HHHHHHHHHHH
T ss_pred hccCC-CCcEEEEEEEEEEEecccceEEEEEEcCC---HHHHHHHHHHH
Confidence 99998 89999999999999999866555555543 23334444444
No 17
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.96 E-value=1.9e-28 Score=264.00 Aligned_cols=190 Identities=19% Similarity=0.210 Sum_probs=156.6
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCC-CCCcccCCCeEEEEecCCccE-EEeCCCCeEEEecCcc-
Q 040700 68 TLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYD-GLSYVSNVPFVILDMFNLRSI-NISLTDETAWVQAGAT- 144 (512)
Q Consensus 68 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~-g~s~~~~~~g~vIdl~~l~~i-~~d~~~~~v~v~~G~~- 144 (512)
...|.+||+|+|++||+++|++|+++++|+.++|+|||+. |.+.....++++|||++||+| ++|+++++++||||++
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~ 133 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTF 133 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCH
Confidence 4579999999999999999999999999999999999986 654421124899999999998 9999999999999998
Q ss_pred -------cccccccCcc---CCCCccccccccCCCCCCccccccchhhheeeEEEEecCCeEEec---cCCCchhHHHHh
Q 040700 145 -------ASKIHGFPAG---VCPTLGVGGHFSGGGYGNMMRKFGLSVDNIVDAQIVDVQGRILDR---KSMGEDLFWAIR 211 (512)
Q Consensus 145 -------~~~g~~~~~G---~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~~v~~---~~~~~dLfwa~r 211 (512)
.++|+.++.+ ....+||||.++++|.|.. +||.+.|+|+++|||++||++++. ..+|+|+|++.|
T Consensus 134 ~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~ 211 (520)
T 1wvf_A 134 GQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFK 211 (520)
T ss_dssp HHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCS
T ss_pred HHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhc
Confidence 6789887654 2336789999999998875 899999999999999999999962 246789877777
Q ss_pred hcCC---------CceEEEEEEEEEEEecCceEEEEEEEecccchHHHHHHHHHHHH
Q 040700 212 GGGA---------ASFCVILSWKIKLVQVPETVTVFRVVKTLEQGATDLVAKWQQVA 259 (512)
Q Consensus 212 G~g~---------g~fGvvt~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (512)
|+.| ++|||||+++||++|.|+....+.+.|+..+++.++++.++.+.
T Consensus 212 ~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 212 WGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp CCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred CCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 7642 59999999999999999866556666665455556666666654
No 18
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.95 E-value=2e-27 Score=257.49 Aligned_cols=188 Identities=14% Similarity=0.152 Sum_probs=155.4
Q ss_pred cceEEcC-CCcccHHHHhhcccccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcccC---
Q 040700 39 SEAIYTS-SNASFSSVLQSYVRNLRFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVSN--- 114 (512)
Q Consensus 39 ~~~v~~p-~d~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~--- 114 (512)
.+.+++| +|+.|++.. ..|+......|.+|+.|+|++||+++|++|+++++++.++|+|||+.+.+...+
T Consensus 9 ~~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 4567888 999999753 248776777899999999999999999999999999999999999875443221
Q ss_pred CCeEEEEe-cCCccEEEeC--CCCeEEEecCcc--------cccccccCc-cCCCCccccccccCCCCCCc---------
Q 040700 115 VPFVILDM-FNLRSINISL--TDETAWVQAGAT--------ASKIHGFPA-GVCPTLGVGGHFSGGGYGNM--------- 173 (512)
Q Consensus 115 ~~g~vIdl-~~l~~i~~d~--~~~~v~v~~G~~--------~~~g~~~~~-G~~~~vgvgG~~~gGg~g~~--------- 173 (512)
.++++||| ++||+|++|+ +.++|+||+|++ .++|+.++. +..+.++|||.+..|++|.+
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~ 162 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTL 162 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccCCcccccccCCcccc
Confidence 13899999 8999999998 788999999998 678888764 33355778888877666654
Q ss_pred -cccccchhhheeeEEEEecCCe---EEeccCCCchhHHHHhhcCCCceEEEEEEEEEEEecCceE
Q 040700 174 -MRKFGLSVDNIVDAQIVDVQGR---ILDRKSMGEDLFWAIRGGGAASFCVILSWKIKLVQVPETV 235 (512)
Q Consensus 174 -s~~~G~~~D~v~~~~vV~a~G~---~v~~~~~~~dLfwa~rG~g~g~fGvvt~~~~~l~p~~~~~ 235 (512)
+++||.++|+|+++|||++||+ +++...+|+||+|+++|.| + ||||+++||++|.++..
T Consensus 163 s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G-~--giIt~~tl~l~p~~~~~ 225 (561)
T 2i0k_A 163 PGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG-R--CFLTSVTMQAGPNFRQR 225 (561)
T ss_dssp TTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT-S--SCEEEEEEECEECCEEE
T ss_pred cccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC-C--EEEEEEEEEEEECCceE
Confidence 6679999999999999999999 6653335899999999665 4 89999999999998643
No 19
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.94 E-value=6.5e-27 Score=245.85 Aligned_cols=165 Identities=18% Similarity=0.237 Sum_probs=146.9
Q ss_pred ccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcccCCCeEEEEecCCccE-EEeCCCCeEEEe
Q 040700 62 RFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVSNVPFVILDMFNLRSI-NISLTDETAWVQ 140 (512)
Q Consensus 62 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~g~vIdl~~l~~i-~~d~~~~~v~v~ 140 (512)
.|+......|.+|++|+|++||+++|++| +++.++|||||+.+.+... .++++|||++||+| ++|+++++++||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~-~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPG-DGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCC-TTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCC-CCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 47777778999999999999999999998 8999999999998877621 24899999999997 899999999999
Q ss_pred cCcc--------cccccccCc-cCCCCccccccccCCCCCCccccccchhhheeeEEEEecCCeEEe-ccCCCchhHHHH
Q 040700 141 AGAT--------ASKIHGFPA-GVCPTLGVGGHFSGGGYGNMMRKFGLSVDNIVDAQIVDVQGRILD-RKSMGEDLFWAI 210 (512)
Q Consensus 141 ~G~~--------~~~g~~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~~v~-~~~~~~dLfwa~ 210 (512)
||++ .++|+.++. +.++.++|||.+.+|+||.. ..||.++|+|++++||++||++++ +..+|+ ||++
T Consensus 87 aG~~l~~l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f~~~ 163 (422)
T 2vfr_A 87 GGVRYAELARVVHARGLALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--FGGA 163 (422)
T ss_dssp TTCBHHHHHHHHHHTTEECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--GGGT
T ss_pred CCCCHHHHHHHHHHcCCcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--cceE
Confidence 9998 678998874 88888999999999999976 699999999999999999999996 445555 9999
Q ss_pred hhcCCCceEEEEEEEEEEEecCceE
Q 040700 211 RGGGAASFCVILSWKIKLVQVPETV 235 (512)
Q Consensus 211 rG~g~g~fGvvt~~~~~l~p~~~~~ 235 (512)
+|+. |++||||+++||++|.++..
T Consensus 164 ~g~~-G~lGvit~~~l~l~p~~~~~ 187 (422)
T 2vfr_A 164 VTSL-GALGVVTSLTLDLEPAYEME 187 (422)
T ss_dssp SSCT-TTTCEEEEEEEECEECCEEE
T ss_pred EecC-CCCEEEEEEEEEEEecCceE
Confidence 9998 89999999999999998744
No 20
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.94 E-value=1.5e-26 Score=246.08 Aligned_cols=180 Identities=16% Similarity=0.179 Sum_probs=146.5
Q ss_pred CCcccHHHHhhcccccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCccc---CCCeEEEEe
Q 040700 46 SNASFSSVLQSYVRNLRFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVS---NVPFVILDM 122 (512)
Q Consensus 46 ~d~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~---~~~g~vIdl 122 (512)
+-+.|+...+ .|+......|.+|++|+|++||+++|++|+++++|++++|+|||+.+..... ..++++|||
T Consensus 11 ~i~~y~~~~~------nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdl 84 (540)
T 3js8_A 11 EIPLYKQSFK------NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDT 84 (540)
T ss_dssp TSCCEEEEEE------CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEET
T ss_pred ccchhcceee------ccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEEC
Confidence 4456665421 4888888899999999999999999999999999999999999985222111 124899999
Q ss_pred c-CCccEEEeCC--CCeEEEecCcc--------cccccccCc-cCCCCccccccccCCCCCCc----------cccccch
Q 040700 123 F-NLRSINISLT--DETAWVQAGAT--------ASKIHGFPA-GVCPTLGVGGHFSGGGYGNM----------MRKFGLS 180 (512)
Q Consensus 123 ~-~l~~i~~d~~--~~~v~v~~G~~--------~~~g~~~~~-G~~~~vgvgG~~~gGg~g~~----------s~~~G~~ 180 (512)
+ +||+|++|++ .++|+||+|++ .++|+.++. +.++.++|||.+.+|++|.. +++||++
T Consensus 85 s~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~ 164 (540)
T 3js8_A 85 TRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSI 164 (540)
T ss_dssp TTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCG
T ss_pred cCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccH
Confidence 5 7999999975 57999999998 678998873 44567899999999999885 6899999
Q ss_pred hhheeeEEEEecCCe-----EEeccCCCchhHHHHhhcCCCceEEEEEEEEEEEecCce
Q 040700 181 VDNIVDAQIVDVQGR-----ILDRKSMGEDLFWAIRGGGAASFCVILSWKIKLVQVPET 234 (512)
Q Consensus 181 ~D~v~~~~vV~a~G~-----~v~~~~~~~dLfwa~rG~g~g~fGvvt~~~~~l~p~~~~ 234 (512)
+|+|++++||++||+ +++...+++||| ++|+|. |+ ||||+++||++|.++.
T Consensus 165 ~D~V~~levV~adG~~~~~~i~~~s~~~~DL~-a~r~G~-G~-gIVTevtlrl~P~~~l 220 (540)
T 3js8_A 165 SNLVLSLTAVVYDKASGAYALRKFARNDPQIA-PLLAHV-GR-SLIVEATLQAAPNQRL 220 (540)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTSGGGH-HHHTCT-TS-SCEEEEEEEEEECCEE
T ss_pred HHhEEEEEEEcCCCCCceeeEEEeCCCChhHH-HHHhcC-CC-eEEEEEEEEEEECCce
Confidence 999999999999998 665334689985 555555 45 5999999999999864
No 21
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.94 E-value=1.2e-25 Score=243.95 Aligned_cols=190 Identities=17% Similarity=0.137 Sum_probs=152.2
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCC-CCCcc-cCCCeEEEEe-cCCccE-EEeCCCCeEEEecC
Q 040700 67 TTLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYD-GLSYV-SNVPFVILDM-FNLRSI-NISLTDETAWVQAG 142 (512)
Q Consensus 67 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~-g~s~~-~~~~g~vIdl-~~l~~i-~~d~~~~~v~v~~G 142 (512)
....|.+||+|+|++||+++|++|+++++|+++||+|||+. |.+.. .. ++++||| ++||+| ++|+++++++||||
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~-~gvvidl~~~mn~il~id~~~~~v~v~aG 145 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVS-GSVVLDMGKNMNRVLEVNVEGAYCVVEPG 145 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSST-TCEEEECTTTCCCEEEEETTTTEEEECTT
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcC-CEEEEEchHhcCCeEEEcCCCCEEEEeCC
Confidence 34579999999999999999999999999999999999986 54442 22 3899999 999998 99999999999999
Q ss_pred cc--------cccccc--cC--ccCCCCccccccccCCCCCCccccccchhhheeeEEEEecCCeEEe-cc--CCCc---
Q 040700 143 AT--------ASKIHG--FP--AGVCPTLGVGGHFSGGGYGNMMRKFGLSVDNIVDAQIVDVQGRILD-RK--SMGE--- 204 (512)
Q Consensus 143 ~~--------~~~g~~--~~--~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~~v~-~~--~~~~--- 204 (512)
++ .++|+. ++ .+.....||||.+.++|.|.. +||..+|+|+++|||++||++++ .. .+++
T Consensus 146 v~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~ 223 (560)
T 1e8g_A 146 VTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRP 223 (560)
T ss_dssp CBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCG
T ss_pred CCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCccccc
Confidence 98 678888 64 233335678999988888864 89999999999999999999996 22 2231
Q ss_pred ------------hhHHHHhhcC----------CCceEEEEEEEEEEEecCceEEEEEEEecccchHHHHHHHHHHHH
Q 040700 205 ------------DLFWAIRGGG----------AASFCVILSWKIKLVQVPETVTVFRVVKTLEQGATDLVAKWQQVA 259 (512)
Q Consensus 205 ------------dLfwa~rG~g----------~g~fGvvt~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (512)
+++|+++++| +|+|||||+++||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 224 ~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 224 ETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp GGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred ccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 6677776541 379999999999999999876666666765455566666666654
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.93 E-value=5.2e-26 Score=245.38 Aligned_cols=187 Identities=12% Similarity=0.103 Sum_probs=152.2
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcccCC----CeEEEEecCCccE-EEeCCCCeEEEec
Q 040700 67 TTLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVSNV----PFVILDMFNLRSI-NISLTDETAWVQA 141 (512)
Q Consensus 67 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~----~g~vIdl~~l~~i-~~d~~~~~v~v~~ 141 (512)
....|.+||+|+|++||+++|++|+++++++.++||||++.|.+...+. ++++|||++||+| ++|+ +++++|+|
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~a 120 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYP 120 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECT
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcC
Confidence 3568999999999999999999999999999999999999887765431 2899999999998 7884 57999999
Q ss_pred Ccc--------cccccccCc---cCCCCccccccccCCCCCCccccccchhh----------------heeeEEEEecCC
Q 040700 142 GAT--------ASKIHGFPA---GVCPTLGVGGHFSGGGYGNMMRKFGLSVD----------------NIVDAQIVDVQG 194 (512)
Q Consensus 142 G~~--------~~~g~~~~~---G~~~~vgvgG~~~gGg~g~~s~~~G~~~D----------------~v~~~~vV~a~G 194 (512)
|++ .++|+.++. +.|..++|||.+..+++|..+.+||...| +|++++||++||
T Consensus 121 Gv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG 200 (571)
T 1f0x_A 121 GTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPE 200 (571)
T ss_dssp TCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHH
T ss_pred CcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCC
Confidence 998 678886643 34555678999999999999999999999 999999999999
Q ss_pred eEEe-cc---------------CCCc-------------------hhHHHH--hhcCCCceEEEEEEEEEEEecCceEEE
Q 040700 195 RILD-RK---------------SMGE-------------------DLFWAI--RGGGAASFCVILSWKIKLVQVPETVTV 237 (512)
Q Consensus 195 ~~v~-~~---------------~~~~-------------------dLfwa~--rG~g~g~fGvvt~~~~~l~p~~~~~~~ 237 (512)
++++ .. .+++ ||+|++ +|+. |+||| |+++||++|.|+....
T Consensus 201 ~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~~~ 278 (571)
T 1f0x_A 201 QILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQQV 278 (571)
T ss_dssp HHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSCEE
T ss_pred cEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeEEE
Confidence 9884 21 2232 888888 9998 89999 9999999999986555
Q ss_pred EEEEecccchHHHHHHHHH
Q 040700 238 FRVVKTLEQGATDLVAKWQ 256 (512)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~ 256 (512)
+.+.++..+++.+++..+.
T Consensus 279 ~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 279 FYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEESCHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHH
Confidence 5555543333444444443
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.88 E-value=4.2e-23 Score=207.84 Aligned_cols=154 Identities=21% Similarity=0.195 Sum_probs=124.9
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcccCCCeEEEEecCCccEEEeCCCCeEEEecCcc---
Q 040700 68 TLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVSNVPFVILDMFNLRSINISLTDETAWVQAGAT--- 144 (512)
Q Consensus 68 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~--- 144 (512)
...|.++|.|+|++||+++|++|+++++|+.++|+|||+.+.+.+.+ +++|||++|++|.+| +.+++|+||++
T Consensus 52 gg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~--gvvI~l~~~~~I~~d--~~~v~v~aG~~~~~ 127 (322)
T 3tx1_A 52 GGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIR--GVILHLDLLQTIERN--NTQIVAMSGAKLID 127 (322)
T ss_dssp CCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEE--EEEEECTTCCCEEEE--TTEEEEETTSBHHH
T ss_pred CceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCC--eEEEECCCCCcEEEC--CCEEEEecCcCHHH
Confidence 45799999999999999999999999999999999999886554343 899999999999886 35999999998
Q ss_pred -----ccccc---ccCccCCCCccccccccCCCCCCccccccchhhheeeEEEEecCCeEEeccCCCchhHHHHhhcCCC
Q 040700 145 -----ASKIH---GFPAGVCPTLGVGGHFSGGGYGNMMRKFGLSVDNIVDAQIVDVQGRILDRKSMGEDLFWAIRGGGAA 216 (512)
Q Consensus 145 -----~~~g~---~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~~v~~~~~~~dLfwa~rG~g~g 216 (512)
.++|+ .+..|.+.+||-...+.+||+| |.++|+|++++||++||++++.. ++|++|++|++..+
T Consensus 128 l~~~l~~~Gl~Gle~~~giPgTVGGav~~NaGgyG------g~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~s~~g 199 (322)
T 3tx1_A 128 TAKFALNESLSGLEFACGIPGSIGGALHMNAGAYG------GEISDVLEAATVLTQTGELKKLK--RSELKAAYRFSTIA 199 (322)
T ss_dssp HHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEETT------EEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-CTTT
T ss_pred HHHHHHHcCCcccccCCCCcchhHHHHHhCccCcc------cchHhhEEEEEEEcCCCCEEEec--hHHcCcchhhcccC
Confidence 44555 4777887776644444456655 89999999999999999999632 36999999988533
Q ss_pred -ceEEEEEEEEEEEecCc
Q 040700 217 -SFCVILSWKIKLVQVPE 233 (512)
Q Consensus 217 -~fGvvt~~~~~l~p~~~ 233 (512)
++||||+++||++|.++
T Consensus 200 ~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 200 EKNYIVLDATFSLALEEK 217 (322)
T ss_dssp GGGCEEEEEEEECEECCH
T ss_pred CCCEEEEEEEEEEEeCCH
Confidence 67999999999999864
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.88 E-value=8e-23 Score=207.92 Aligned_cols=156 Identities=13% Similarity=0.042 Sum_probs=135.4
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcccCCCeEEEEecCCccEEEeC--CCCeEEEecCcc-
Q 040700 68 TLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVSNVPFVILDMFNLRSINISL--TDETAWVQAGAT- 144 (512)
Q Consensus 68 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~--~~~~v~v~~G~~- 144 (512)
...|.++|+|+|++||+++|++|+++++|+.++|+|||..+.+. .+ |+||+++ |++|+++. +..+++|++|+.
T Consensus 28 gg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~--GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~~ 103 (357)
T 3i99_A 28 EQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT--GMIVVNR-LNGIEHQQDDDYHRLHVAGGEDW 103 (357)
T ss_dssp SCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSBH
T ss_pred CccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC--eEEEEcC-CCceEEeccCCceEEEEeCCCcH
Confidence 45788999999999999999999999999999999999876654 44 8999998 99998853 456899999998
Q ss_pred -------cccccccCccCCCCccccccccCCCCCCccccccc-hhhheeeEEEEec-CCeEEeccCCCchhHHHHhhcCC
Q 040700 145 -------ASKIHGFPAGVCPTLGVGGHFSGGGYGNMMRKFGL-SVDNIVDAQIVDV-QGRILDRKSMGEDLFWAIRGGGA 215 (512)
Q Consensus 145 -------~~~g~~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~-~~D~v~~~~vV~a-~G~~v~~~~~~~dLfwa~rG~g~ 215 (512)
..+|+ .|.+..+||+| +.||+.+++.+.||. ++|+|++++||++ ||++++.. +.||+|+||++..
T Consensus 104 ~~l~~~a~~~Gl---~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~YR~s~~ 177 (357)
T 3i99_A 104 PSLVSWCVEQGI---GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGYRDSIF 177 (357)
T ss_dssp HHHHHHHHHTTC---TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBTTBCGG
T ss_pred HHHHHHHHHcCC---cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCcccccccC
Confidence 56777 57788888888 679999999999997 8999999999999 99999733 3599999999863
Q ss_pred ----CceEEEEEEEEEEEecCc
Q 040700 216 ----ASFCVILSWKIKLVQVPE 233 (512)
Q Consensus 216 ----g~fGvvt~~~~~l~p~~~ 233 (512)
+++||||+++|||+|.++
T Consensus 178 ~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 178 KHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp GTTTTTTEEEEEEEEEEESSCC
T ss_pred CCccCCCEEEEEEEEEEEeCCc
Confidence 379999999999999764
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.85 E-value=3.6e-22 Score=202.18 Aligned_cols=149 Identities=18% Similarity=0.195 Sum_probs=119.5
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcccCCCeEEEEecCCccEEEeCCCCeEEEecCcc---
Q 040700 68 TLKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVSNVPFVILDMFNLRSINISLTDETAWVQAGAT--- 144 (512)
Q Consensus 68 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~--- 144 (512)
...|.++++|+|++||+++|++|+++++|+.++|||||+.+.+.+.+ +++|||++||+|++| +++++||||++
T Consensus 46 ~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~--gvvI~l~~m~~i~id--~~~v~v~aGv~~~~ 121 (326)
T 1hsk_A 46 GGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR--GIVISLLSLDHIEVS--DDAIIAGSGAAIID 121 (326)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE--EEEEECTTCCCEEEE--TTEEEEETTSBHHH
T ss_pred CCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC--eEEEEeCCCCceEEc--CCEEEEeCCCcHHH
Confidence 45799999999999999999999999999999999999886555443 899999999999887 36999999998
Q ss_pred -----ccccc---ccCccCCCCccccccccCCCCCCcccccc-chhhheeeEEEEecCCeEEeccCCCchhHHHHhhcC-
Q 040700 145 -----ASKIH---GFPAGVCPTLGVGGHFSGGGYGNMMRKFG-LSVDNIVDAQIVDVQGRILDRKSMGEDLFWAIRGGG- 214 (512)
Q Consensus 145 -----~~~g~---~~~~G~~~~vgvgG~~~gGg~g~~s~~~G-~~~D~v~~~~vV~a~G~~v~~~~~~~dLfwa~rG~g- 214 (512)
.++|+ .+..+.+. .|||.+..++ +.|| .++|+|++++||++||++++... .|++|++|+..
T Consensus 122 l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~na-----ggyG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~~l 192 (326)
T 1hsk_A 122 VSRVARDYALTGLEFACGIPG--SIGGAVYMNA-----GAYGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNSII 192 (326)
T ss_dssp HHHHHHHTTEESCGGGTTCCS--BHHHHHHHTC-----EETTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBCHH
T ss_pred HHHHHHHCCCccccccCCCcc--hhhHHHhccc-----ccCchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCcccccc
Confidence 45565 23334433 3455554433 3378 99999999999999999986332 28899999742
Q ss_pred --CCceEEEEEEEEEEEec
Q 040700 215 --AASFCVILSWKIKLVQV 231 (512)
Q Consensus 215 --~g~fGvvt~~~~~l~p~ 231 (512)
.| ||||+++||++|.
T Consensus 193 ~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 193 QKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp HHTT--CEEEEEEEECEEC
T ss_pred CCCC--EEEEEEEEEEEcC
Confidence 13 9999999999998
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.85 E-value=3.5e-21 Score=195.30 Aligned_cols=155 Identities=14% Similarity=0.082 Sum_probs=132.9
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcccCCCeEEEEecCCccEE-EeCCC-CeEEEecCcc--
Q 040700 69 LKPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVSNVPFVILDMFNLRSIN-ISLTD-ETAWVQAGAT-- 144 (512)
Q Consensus 69 ~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~-~d~~~-~~v~v~~G~~-- 144 (512)
..|.++++|+|++||+++|++|+++++|+.++|||||..+.+. .+ |+||+|+ |+++. ++.++ .+++|++|++
T Consensus 13 g~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~--GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~~ 88 (340)
T 1uxy_A 13 HNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR--GTVIINR-IKGIEIHDEPDAWYLHVGAGENWH 88 (340)
T ss_dssp CBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSBHH
T ss_pred ccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC--eEEEEcc-CCCcEEEecCCCeEEEEecCCCHH
Confidence 4688999999999999999999999999999999999886554 44 8999997 99985 55555 6899999998
Q ss_pred ------cccccccCccCCCCccccccccCCCCCCccccccc-hhhheeeEEEEec-CCeEEeccCCCchhHHHHhhcCC-
Q 040700 145 ------ASKIHGFPAGVCPTLGVGGHFSGGGYGNMMRKFGL-SVDNIVDAQIVDV-QGRILDRKSMGEDLFWAIRGGGA- 215 (512)
Q Consensus 145 ------~~~g~~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~-~~D~v~~~~vV~a-~G~~v~~~~~~~dLfwa~rG~g~- 215 (512)
..+|+ .|.+..+||+| ++||+..++.+.||. ++|+|++++||++ +|++++.. +.|++|++|++..
T Consensus 89 ~l~~~~~~~Gl---~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR~s~~~ 162 (340)
T 1uxy_A 89 RLVKYTLQEGM---PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYRDSIFK 162 (340)
T ss_dssp HHHHHHHHTTC---CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTTBCGGG
T ss_pred HHHHHHHHCCC---CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccCcCccC
Confidence 55676 67778888888 779999999999995 8999999999996 99998633 3599999998742
Q ss_pred ---CceEEEEEEEEEEEecCc
Q 040700 216 ---ASFCVILSWKIKLVQVPE 233 (512)
Q Consensus 216 ---g~fGvvt~~~~~l~p~~~ 233 (512)
+++||||+++||++|.++
T Consensus 163 ~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 163 HEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp TTTTTTEEEEEEEEEEESSCC
T ss_pred CcCCCCEEEEEEEEEEEcCCC
Confidence 369999999999999864
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.80 E-value=2.6e-20 Score=182.56 Aligned_cols=143 Identities=16% Similarity=0.144 Sum_probs=120.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcccCCCeEEEEecCCccEEEeCCCCeEEEecCcc-----
Q 040700 70 KPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYVSNVPFVILDMFNLRSINISLTDETAWVQAGAT----- 144 (512)
Q Consensus 70 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~----- 144 (512)
.|. +|+|+|++||+++| ++|+.++|+|||..+.+.+.+ +|+||+|++|++|++| . +|++|+.
T Consensus 22 ~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~-~GvVI~l~~~~~I~vd--~---~v~aG~~~~~l~ 88 (268)
T 2gqt_A 22 PAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP-ERVIRLAGEFQTYDLK--G---WVGAGTLLPLLV 88 (268)
T ss_dssp EEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS-SEEEEECGGGGCBCTT--S---EEETTSBHHHHH
T ss_pred ceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC-CeEEEEcCCCCCcEEc--C---EEECCCCHHHHH
Confidence 456 99999999999999 899999999999887655432 3899999999999765 2 9999998
Q ss_pred ---cccccccCccCCCCccccccccCCCCCCcccccc-chhhheeeEEEEecCCeEEeccCCCchhHHHHhhcCCCceEE
Q 040700 145 ---ASKIHGFPAGVCPTLGVGGHFSGGGYGNMMRKFG-LSVDNIVDAQIVDVQGRILDRKSMGEDLFWAIRGGGAASFCV 220 (512)
Q Consensus 145 ---~~~g~~~~~G~~~~vgvgG~~~gGg~g~~s~~~G-~~~D~v~~~~vV~a~G~~v~~~~~~~dLfwa~rG~g~g~fGv 220 (512)
..+|+ .|.+..+|++| ++||++.++.+.|| .++|+|++++|| +||++++.. +.|++|+||++....-||
T Consensus 89 ~~~~~~Gl---~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~YR~s~~~~~gI 161 (268)
T 2gqt_A 89 QEAARAGL---SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFGYRKSHLPPGGI 161 (268)
T ss_dssp HHHHHTTE---ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCBTTBCCCSTTCE
T ss_pred HHHHHcCC---cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccccCCCCcCCCce
Confidence 56777 47788888888 78999999999999 699999999999 999999733 358999999986321249
Q ss_pred EEEEEEEEEecC
Q 040700 221 ILSWKIKLVQVP 232 (512)
Q Consensus 221 vt~~~~~l~p~~ 232 (512)
||+++|||+|.+
T Consensus 162 Vt~~~~~L~~~~ 173 (268)
T 2gqt_A 162 VTRVRLKLKERP 173 (268)
T ss_dssp EEEEEECCEECC
T ss_pred EEEEEEEEEeCC
Confidence 999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.69 E-value=5.7e-17 Score=154.37 Aligned_cols=105 Identities=18% Similarity=0.178 Sum_probs=89.9
Q ss_pred EEEeCCCCeEEEecCcc--------cccccccCc--cCCCCccccccccCCCCCCccccccchhhheeeEEEEecCCeEE
Q 040700 128 INISLTDETAWVQAGAT--------ASKIHGFPA--GVCPTLGVGGHFSGGGYGNMMRKFGLSVDNIVDAQIVDVQGRIL 197 (512)
Q Consensus 128 i~~d~~~~~v~v~~G~~--------~~~g~~~~~--G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~~v 197 (512)
+++|+++++++|++|++ .++|+.++. |.++. +|||++.+|++| ++||.. |+|++++||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 46889999999999998 678988776 55555 899999999998 899999 9999999999999998
Q ss_pred e-cc-----CCCchhHHHHhhcCCCceEEEEEEEEEEEecCceEEEE
Q 040700 198 D-RK-----SMGEDLFWAIRGGGAASFCVILSWKIKLVQVPETVTVF 238 (512)
Q Consensus 198 ~-~~-----~~~~dLfwa~rG~g~g~fGvvt~~~~~l~p~~~~~~~~ 238 (512)
+ +. ..++||||+++|++ |+|||||+++||++|.++....+
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~ 121 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLR 121 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEE
T ss_pred EECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEE
Confidence 5 22 23479999999997 89999999999999998755443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=97.30 E-value=0.00049 Score=67.79 Aligned_cols=146 Identities=16% Similarity=0.098 Sum_probs=90.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCC--Cc-ccCCCeEEEEec---CCccEEEeCCCCeEEEecCc
Q 040700 70 KPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGL--SY-VSNVPFVILDMF---NLRSINISLTDETAWVQAGA 143 (512)
Q Consensus 70 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~--s~-~~~~~g~vIdl~---~l~~i~~d~~~~~v~v~~G~ 143 (512)
.+--++.|+|.+|+.++++.. +.+..+.|||++.... .. .. .+++||++ .|+.|+.+ ++.+++|+|+
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~~--~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~ 76 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFAQ--PEHLIDINRIPELRGIREE--GSTVVIGAMT 76 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCC--CSEEEECTTCGGGCCEEEE--TTEEEEETTC
T ss_pred CcceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCC--CCEEEECCCChhhcceEec--CCEEEEccCC
Confidence 345689999999999988753 3578999999995431 11 12 26899998 47778764 4479999999
Q ss_pred c----ccc--------cccc----CccCC--CCccccccccCCCCCCccccccchhhhee----eEEEEecCCeEEeccC
Q 040700 144 T----ASK--------IHGF----PAGVC--PTLGVGGHFSGGGYGNMMRKFGLSVDNIV----DAQIVDVQGRILDRKS 201 (512)
Q Consensus 144 ~----~~~--------g~~~----~~G~~--~~vgvgG~~~gGg~g~~s~~~G~~~D~v~----~~~vV~a~G~~v~~~~ 201 (512)
+ ..+ ++.. ..|.. +..+|||.+..+.- .+-....++ .+++...+|+ ++-+
T Consensus 77 tl~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~------~~D~~~~l~Al~A~v~~~~~~G~-r~i~- 148 (287)
T 1ffv_C 77 VENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP------GNDHPALSIAVEAHFVLEGPNGR-RTVP- 148 (287)
T ss_dssp BHHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT------TCSHHHHHHHTTCEEEEEETTEE-EEEE-
T ss_pred cHHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC------cHHHHHHHHHcCcEEEEEcCCce-EEEE-
Confidence 8 111 2221 12110 12357787776531 132333333 6888889984 3322
Q ss_pred CCchhHHHHhhcCCCceEEEEEEEEEEEec
Q 040700 202 MGEDLFWAIRGGGAASFCVILSWKIKLVQV 231 (512)
Q Consensus 202 ~~~dLfwa~rG~g~g~fGvvt~~~~~l~p~ 231 (512)
-.|+|+++|-..-..-.|||+++|.+.+.
T Consensus 149 -~~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 149 -ADGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp -STTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred -HHHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 23888877632211225999999987653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=95.46 E-value=0.0099 Score=58.38 Aligned_cols=144 Identities=15% Similarity=0.093 Sum_probs=84.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCC-CcccCCCeEEEEecC---CccEEEeCCCCeEEEecCcc-
Q 040700 70 KPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGL-SYVSNVPFVILDMFN---LRSINISLTDETAWVQAGAT- 144 (512)
Q Consensus 70 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~-s~~~~~~g~vIdl~~---l~~i~~d~~~~~v~v~~G~~- 144 (512)
.+--++.|+|.+|+.++++.. +-+..+.+|||+.... .........+||+++ |+.|+.+ ++.+++|++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREE--GTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEE--TTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 345678999999999888643 3468899999995321 111011268899976 5677764 45899999998
Q ss_pred ---ccc--------cccc--CccCCC----CccccccccCCCCCCccccccchhhhee-------eEEEEecCCeEEecc
Q 040700 145 ---ASK--------IHGF--PAGVCP----TLGVGGHFSGGGYGNMMRKFGLSVDNIV-------DAQIVDVQGRILDRK 200 (512)
Q Consensus 145 ---~~~--------g~~~--~~G~~~----~vgvgG~~~gGg~g~~s~~~G~~~D~v~-------~~~vV~a~G~~v~~~ 200 (512)
..+ ++.- ..-..+ ..+|||.+..+. ..+|.+. .+++..++|+....
T Consensus 79 ~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~r~v~- 148 (288)
T 1n62_C 79 HALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGARIVA- 148 (288)
T ss_dssp HHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEEEEEE-
T ss_pred HHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCccEEEE-
Confidence 111 1110 001111 225788887652 2345443 66677788843222
Q ss_pred CCCchhHHHHhhcCCCceEEEEEEEEEEEe
Q 040700 201 SMGEDLFWAIRGGGAASFCVILSWKIKLVQ 230 (512)
Q Consensus 201 ~~~~dLfwa~rG~g~g~fGvvt~~~~~l~p 230 (512)
- .|+|.+++-..-.---|||++.|...+
T Consensus 149 ~--~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 149 A--RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp H--HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred H--HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 1 366655542111112589999987654
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=95.01 E-value=0.0094 Score=62.40 Aligned_cols=141 Identities=15% Similarity=0.092 Sum_probs=87.9
Q ss_pred EEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCC--CcccCCCeEEEEecC---CccEEEeCCCCeEEEecCcc----
Q 040700 74 IVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGL--SYVSNVPFVILDMFN---LRSINISLTDETAWVQAGAT---- 144 (512)
Q Consensus 74 vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~--s~~~~~~g~vIdl~~---l~~i~~d~~~~~v~v~~G~~---- 144 (512)
.+.|+|.+|+.++++.. . +..+.+||++.... .... ...++||+++ |+.|+.+ ++.+++|+|++
T Consensus 180 y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~-~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~l 252 (462)
T 2w3s_A 180 AFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALR-DLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAAL 252 (462)
T ss_dssp CBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCC-CCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHHH
T ss_pred EEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCC-CCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHHH
Confidence 57899999998888653 2 57889999997642 1111 1257899987 6778775 34799999998
Q ss_pred cc---ccc-------ccCccCC--CCccccccccCCCCCCccccccchhhhee----eEEEEecCCeEEeccCCCchhHH
Q 040700 145 AS---KIH-------GFPAGVC--PTLGVGGHFSGGGYGNMMRKFGLSVDNIV----DAQIVDVQGRILDRKSMGEDLFW 208 (512)
Q Consensus 145 ~~---~g~-------~~~~G~~--~~vgvgG~~~gGg~g~~s~~~G~~~D~v~----~~~vV~a~G~~v~~~~~~~dLfw 208 (512)
.. ..+ ....+.. +..+|||.+..+.+ .+-...-++ .+++..++|+ ++-+ -.|+|.
T Consensus 253 ~~~l~~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~-R~vp--~~dF~~ 323 (462)
T 2w3s_A 253 RAFAEGPHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQER-RRMP--LEDFFL 323 (462)
T ss_dssp HHHHTTTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBC-CCCB--GGGGEE
T ss_pred HHHHHHHhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCce-EEEE--HHHhhc
Confidence 11 111 1111111 12357888877653 356666677 7888888884 2222 247777
Q ss_pred HHhhcCCCceEEEEEEEEEEEe
Q 040700 209 AIRGGGAASFCVILSWKIKLVQ 230 (512)
Q Consensus 209 a~rG~g~g~fGvvt~~~~~l~p 230 (512)
++|-.--..-.|||+++|...+
T Consensus 324 g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 324 EYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp ETTEESCCTTCEEEEEEEESCC
T ss_pred ccccccCCCCcEEEEEEEecCC
Confidence 6653211112499999987654
No 32
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=91.67 E-value=0.12 Score=53.33 Aligned_cols=59 Identities=15% Similarity=0.241 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhhcccccCCCCcc-ccccCCccCCCCCCCCccccchhhhhcccccHHHHHHhhhccCCCCCCcCC
Q 040700 429 NRYLNLTRTFYEAMTPYVSKNPREA-FLNYRDIDIGSNTNGTYEEGKIYGIKYFKNNFDRLVRVKTSVDPDNFFTYE 504 (512)
Q Consensus 429 ~~~~~w~~~~~~~l~p~~~~~~~g~-Y~Ny~d~~l~~~~~~~~~~~~~w~~~yyG~ny~RL~~iK~kyDP~nvF~~~ 504 (512)
+...++++++.+.+..+. |. |..+ |.... .+..... |+ +++++++||++|||+++|.+.
T Consensus 355 ~~~~~~~~~~~~lv~~~g-----G~~~wgk-~~~~~---------~~~~~~~-Yp-~~~~f~~vk~~~DP~g~f~n~ 414 (422)
T 2vfr_A 355 AAVLPVVRRLEEALVPFA-----ARPHWGK-VFTVP---------AGELRAL-YP-RLADFGALAGALDPAGKFTNA 414 (422)
T ss_dssp HHHHHHHHHHHHHHGGGT-----CEECTTS-CCCCC---------HHHHHTT-CT-THHHHHHHHHHHCTTCTTCCH
T ss_pred hhHHHHHHHHHHHHHHcC-----Ccccccc-cCCCC---------HHHHHHH-Cc-CHHHHHHHHHHhCCCCccCCH
Confidence 345567777777776662 22 3233 22211 1234444 45 899999999999999999864
No 33
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=87.23 E-value=0.57 Score=49.66 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=23.4
Q ss_pred hhhhcccccH-HHHHHhhhccCCCCCCcCCC
Q 040700 476 YGIKYFKNNF-DRLVRVKTSVDPDNFFTYEQ 505 (512)
Q Consensus 476 w~~~yyG~ny-~RL~~iK~kyDP~nvF~~~q 505 (512)
|...+||+++ +-+++||+.+||+|+|+-..
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGk 511 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGR 511 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTG
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 4477888765 55599999999999997544
No 34
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=82.52 E-value=1.1 Score=43.64 Aligned_cols=140 Identities=18% Similarity=0.106 Sum_probs=79.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCC---CcccCCCeEEEEecC---CccEEEeCCCCeEEEecCc
Q 040700 70 KPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGL---SYVSNVPFVILDMFN---LRSINISLTDETAWVQAGA 143 (512)
Q Consensus 70 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~---s~~~~~~g~vIdl~~---l~~i~~d~~~~~v~v~~G~ 143 (512)
.|--++.|+|.+|+.++++- +-...+.+|||+.... .... ...+||+++ |+.|+.+ ++.+++|+++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~--~~~lIdl~~i~eL~~I~~~--~~~l~IGA~v 75 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVY--PSCLVDLRNVSELFEISQS--AGILSVGAMV 75 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCC--CSEEEECTTCGGGGCEEEE--TTEEEEETTC
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCC--CCEEEECCCChhhcCeEEc--CCEEEEcCCC
Confidence 44567899999999888863 2346778999994311 1111 247899987 5667653 4589999999
Q ss_pred c----ccc--------ccc-----cCccCC-CCccccccccCCCCCCccccccchhhhee-------eEEEEecCCeEEe
Q 040700 144 T----ASK--------IHG-----FPAGVC-PTLGVGGHFSGGGYGNMMRKFGLSVDNIV-------DAQIVDVQGRILD 198 (512)
Q Consensus 144 ~----~~~--------g~~-----~~~G~~-~~vgvgG~~~gGg~g~~s~~~G~~~D~v~-------~~~vV~a~G~~v~ 198 (512)
+ ..+ .+. +.+... +..++||.+..+- ..+|... .+++..++|+...
T Consensus 76 t~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~v 146 (288)
T 1t3q_C 76 THFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRSV 146 (288)
T ss_dssp BHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEEE
T ss_pred cHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEEE
Confidence 8 111 111 101000 1225778776431 2456554 6677777875332
Q ss_pred ccCCCchhHHHHhhcCCCceEEEEEEEEEEE
Q 040700 199 RKSMGEDLFWAIRGGGAASFCVILSWKIKLV 229 (512)
Q Consensus 199 ~~~~~~dLfwa~rG~g~g~fGvvt~~~~~l~ 229 (512)
. - .|+|-+.+--.-.---|||++.|...
T Consensus 147 p-~--~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 147 S-A--TDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp E-H--HHHEEETTEESCCTTCEEEEEEEECC
T ss_pred E-H--HHHhcCcccccCCCCCEEEEEEecCC
Confidence 1 1 25554432100011248999887543
No 35
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=82.28 E-value=2 Score=46.77 Aligned_cols=29 Identities=31% Similarity=0.363 Sum_probs=24.4
Q ss_pred hhhhhccc-ccHHHHHHhhhccCCCCCCcC
Q 040700 475 IYGIKYFK-NNFDRLVRVKTSVDPDNFFTY 503 (512)
Q Consensus 475 ~w~~~yyG-~ny~RL~~iK~kyDP~nvF~~ 503 (512)
.|-..++| ..++.+++||+.|||+|+|+-
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 46667777 479999999999999999973
No 36
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=79.77 E-value=1.1 Score=44.14 Aligned_cols=67 Identities=9% Similarity=-0.033 Sum_probs=46.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCC---CcccCCCeEEEEecC---CccEEEeCCCCeEEEecCc
Q 040700 70 KPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGL---SYVSNVPFVILDMFN---LRSINISLTDETAWVQAGA 143 (512)
Q Consensus 70 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~---s~~~~~~g~vIdl~~---l~~i~~d~~~~~v~v~~G~ 143 (512)
.+...++|+|.+|+.++++. +. ...+.+||++.... .... ...+||+++ |+.|+.+ ++.+++|+++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~--~~~lIdl~~i~eL~~I~~~--~~~l~IGA~v 80 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQL--FPMIICPAWIPELNAVEHG--PEGISFGAAC 80 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCC--CSEEEECTTCGGGGCEEEC--SSEEEEETTC
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCC--CCEEEECCCChhhcceEEC--CCeEEEccCC
Confidence 34568999999999887643 22 35788999986422 1111 257899986 5567653 5689999999
Q ss_pred c
Q 040700 144 T 144 (512)
Q Consensus 144 ~ 144 (512)
+
T Consensus 81 t 81 (305)
T 3nvz_B 81 A 81 (305)
T ss_dssp B
T ss_pred c
Confidence 9
No 37
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=78.15 E-value=1.6 Score=42.65 Aligned_cols=69 Identities=20% Similarity=0.193 Sum_probs=45.9
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhcCC-eEEEeecccCCCCC-CcccCCCeEEEEecCC---ccEEEeCCCCeEEEecCcc
Q 040700 71 PLVIVAAKHESHVQATVICSKKFGL-QIRIRSGGHDYDGL-SYVSNVPFVILDMFNL---RSINISLTDETAWVQAGAT 144 (512)
Q Consensus 71 p~~vv~p~s~~dv~~~v~~a~~~~~-~~~v~ggGh~~~g~-s~~~~~~g~vIdl~~l---~~i~~d~~~~~v~v~~G~~ 144 (512)
|--.++|+|.+|..++++ +++- ...+.+||++.... -........+||++++ +.|+. +++.+++|++++
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 76 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALST 76 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCB
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCc
Confidence 345789999999877664 3332 46788999985421 0100012578999875 55665 456899999998
No 38
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=58.58 E-value=11 Score=40.11 Aligned_cols=23 Identities=17% Similarity=0.212 Sum_probs=19.4
Q ss_pred ccHHHHHHhhhccCCCCCCcCCC
Q 040700 483 NNFDRLVRVKTSVDPDNFFTYEQ 505 (512)
Q Consensus 483 ~ny~RL~~iK~kyDP~nvF~~~q 505 (512)
..++-+++||+.+||+|+|+-..
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk 545 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGK 545 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTG
T ss_pred HHHHHHHHHHHHcCccCCCCCCc
Confidence 36888999999999999997543
No 39
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=57.70 E-value=7.3 Score=40.64 Aligned_cols=28 Identities=25% Similarity=0.501 Sum_probs=23.6
Q ss_pred hhhhhcccccHHHHHHhhhccCCCCCCcCC
Q 040700 475 IYGIKYFKNNFDRLVRVKTSVDPDNFFTYE 504 (512)
Q Consensus 475 ~w~~~yyG~ny~RL~~iK~kyDP~nvF~~~ 504 (512)
.+...| .++++.++||+++||+++|.+.
T Consensus 446 ~~~~~Y--P~~~~F~~lr~~~DP~g~F~n~ 473 (481)
T 4feh_A 446 TFHAMY--PRVDEWISVRRKVDPLRVFASD 473 (481)
T ss_dssp HHHHHC--TTHHHHHHHHHHHCTTCCBCCH
T ss_pred HHHHhC--cCHHHHHHHHHhhCCccccCCH
Confidence 466555 7899999999999999999864
No 40
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=55.20 E-value=9 Score=37.75 Aligned_cols=67 Identities=15% Similarity=0.128 Sum_probs=46.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCC---CCcccCCCeEEEEecCC---ccEEEeCCCCeEEEecCc
Q 040700 70 KPLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDG---LSYVSNVPFVILDMFNL---RSINISLTDETAWVQAGA 143 (512)
Q Consensus 70 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g---~s~~~~~~g~vIdl~~l---~~i~~d~~~~~v~v~~G~ 143 (512)
.|--.+.|+|.+|..++++ + -.-.+.+||++... ..... ...+||++++ +.|+.+ +++.++||+++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~k~~~~~--p~~lIdi~~i~eL~~I~~~-~~~~l~IGA~v 76 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---A--EATLPLGAGTDLLPNLRRGLGH--PAALVDLTGIDGLATISTL-ADGSLRIGAGA 76 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHHHTTSCC--CSEEEECTTSTTTTCEEEC-TTSCEEEETTC
T ss_pred CceEEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHHhccCCC--CCEEEECCCChhhcceEEC-CCCeEEEccCC
Confidence 3445789999999988876 2 24678899998632 11111 2578999875 567654 33479999999
Q ss_pred c
Q 040700 144 T 144 (512)
Q Consensus 144 ~ 144 (512)
+
T Consensus 77 t 77 (324)
T 1rm6_B 77 T 77 (324)
T ss_dssp B
T ss_pred c
Confidence 8
No 41
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=51.17 E-value=6.1 Score=42.11 Aligned_cols=22 Identities=27% Similarity=0.442 Sum_probs=20.6
Q ss_pred ccHHHHHHhhhccCCCCCCcCC
Q 040700 483 NNFDRLVRVKTSVDPDNFFTYE 504 (512)
Q Consensus 483 ~ny~RL~~iK~kyDP~nvF~~~ 504 (512)
.++++.+++|+++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 8999999999999999999875
No 42
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=43.02 E-value=8.4 Score=40.78 Aligned_cols=23 Identities=22% Similarity=0.346 Sum_probs=21.1
Q ss_pred cccHHHHHHhhhccCCCCCCcCC
Q 040700 482 KNNFDRLVRVKTSVDPDNFFTYE 504 (512)
Q Consensus 482 G~ny~RL~~iK~kyDP~nvF~~~ 504 (512)
|+|++.-+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 43
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=40.25 E-value=29 Score=28.77 Aligned_cols=42 Identities=14% Similarity=0.245 Sum_probs=34.6
Q ss_pred ccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeE-EEeecccC
Q 040700 62 RFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQI-RIRSGGHD 105 (512)
Q Consensus 62 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~v~ggGh~ 105 (512)
+|.. ...|..|+++.+++++.++.+.|++.|++. .++=.|+.
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 4643 357889999999999999999999999996 56667764
No 44
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=39.93 E-value=30 Score=36.87 Aligned_cols=29 Identities=14% Similarity=0.272 Sum_probs=18.7
Q ss_pred hhhhhcccc-cHHHHHHhhhccCCCCCCcC
Q 040700 475 IYGIKYFKN-NFDRLVRVKTSVDPDNFFTY 503 (512)
Q Consensus 475 ~w~~~yyG~-ny~RL~~iK~kyDP~nvF~~ 503 (512)
.|....+|+ .++-+++||+.+||+|+|+-
T Consensus 551 ~~l~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 551 PWMTRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp --------CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHHHHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 355566664 68999999999999999973
No 45
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=38.12 E-value=15 Score=39.09 Aligned_cols=28 Identities=18% Similarity=0.126 Sum_probs=21.5
Q ss_pred ccccHHHHHHhhhccCCCCCCcCCCCCCC
Q 040700 481 FKNNFDRLVRVKTSVDPDNFFTYEQSIPI 509 (512)
Q Consensus 481 yG~ny~RL~~iK~kyDP~nvF~~~qsI~p 509 (512)
|++... |++||+.+||.|+|+-..-+.|
T Consensus 535 ~~~~~~-m~~iK~~~DP~~ilNPGk~~t~ 562 (571)
T 1f0x_A 535 YKAPET-LQKFYRENDPTNSMNPGIGKTS 562 (571)
T ss_dssp SCCCHH-HHHHHHHHCTTCCBSTTTTTCC
T ss_pred cCCHHH-HHHHHHHhCCCCCCCCCcCcCC
Confidence 344444 9999999999999986665544
No 46
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=28.51 E-value=71 Score=26.55 Aligned_cols=38 Identities=13% Similarity=0.133 Sum_probs=32.6
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHhcCCeE-EEeecccCC
Q 040700 69 LKPLVIVAAKHESHVQATVICSKKFGLQI-RIRSGGHDY 106 (512)
Q Consensus 69 ~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~v~ggGh~~ 106 (512)
..+..|+++.+++++.++.+.|++.|++. .|+-.|+.-
T Consensus 47 G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~Te 85 (123)
T 1rzw_A 47 GQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLTE 85 (123)
T ss_dssp CSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCCS
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCcc
Confidence 36789999999999999999999999986 667777753
No 47
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=27.96 E-value=90 Score=25.74 Aligned_cols=38 Identities=24% Similarity=0.251 Sum_probs=32.6
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHhcCCeE-EEeecccC
Q 040700 68 TLKPLVIVAAKHESHVQATVICSKKFGLQI-RIRSGGHD 105 (512)
Q Consensus 68 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~v~ggGh~ 105 (512)
...|..|+++.+++++.++.+.|++.|++. .++-.|+.
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 357889999999999999999999999986 56677774
No 48
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=26.05 E-value=94 Score=25.34 Aligned_cols=38 Identities=24% Similarity=0.266 Sum_probs=31.0
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHhcCCeE-EEeecccC
Q 040700 68 TLKPLVIVAAKHESHVQATVICSKKFGLQI-RIRSGGHD 105 (512)
Q Consensus 68 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~v~ggGh~ 105 (512)
...|..|+++.+++++.++.+.|++.|++. .++-.|+.
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 457889999999999999999999999986 55566654
No 49
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=25.32 E-value=98 Score=25.33 Aligned_cols=38 Identities=8% Similarity=0.121 Sum_probs=32.5
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHhcCCeE-EEeecccC
Q 040700 68 TLKPLVIVAAKHESHVQATVICSKKFGLQI-RIRSGGHD 105 (512)
Q Consensus 68 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~v~ggGh~ 105 (512)
...|..|+++.+++++.++.+.|++.|++. .++-.|+.
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 457889999999999999999999999986 56666664
No 50
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=23.27 E-value=1.3e+02 Score=26.03 Aligned_cols=41 Identities=17% Similarity=0.198 Sum_probs=34.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCCcc
Q 040700 72 LVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLSYV 112 (512)
Q Consensus 72 ~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s~~ 112 (512)
...+.|.+.++++++++.+.+.+..+.+..||.+....+..
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D~t 87 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQT 87 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCCH
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcCh
Confidence 35788999999999999988766889999999987655443
No 51
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=22.07 E-value=1.3e+02 Score=24.49 Aligned_cols=41 Identities=27% Similarity=0.418 Sum_probs=33.1
Q ss_pred ccCCCCCCCccEEEEcCCHHHHHHHHHHHHhcCCeE-EEeeccc
Q 040700 62 RFATPTTLKPLVIVAAKHESHVQATVICSKKFGLQI-RIRSGGH 104 (512)
Q Consensus 62 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~v~ggGh 104 (512)
+|.. ...|..+++..+++++.++.+.|++.|++. .++=.|+
T Consensus 45 ~W~~--~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 45 QWEY--CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred HHHh--CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3643 345889999999999999999999999985 5666666
No 52
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=20.86 E-value=46 Score=39.17 Aligned_cols=68 Identities=9% Similarity=0.008 Sum_probs=44.9
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhcCCeEEEeecccCCCCCC-cccCCCeEEEEecC---CccEEEeCCCCeEEEecCcc
Q 040700 71 PLVIVAAKHESHVQATVICSKKFGLQIRIRSGGHDYDGLS-YVSNVPFVILDMFN---LRSINISLTDETAWVQAGAT 144 (512)
Q Consensus 71 p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~s-~~~~~~g~vIdl~~---l~~i~~d~~~~~v~v~~G~~ 144 (512)
+...++|.|.+|+.++++- + -.-.+.+||++....- ........+||+++ |+.|+.+ ++.++||++++
T Consensus 233 ~~~~~~P~sl~ea~~ll~~---~-~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~--~~~l~IGA~vt 304 (1332)
T 3unc_A 233 RVTWIQASTLKELLDLKAQ---H-PEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACA 304 (1332)
T ss_dssp SCEEEECCSHHHHHHHHHH---C-TTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCB
T ss_pred ceEEEccCCHHHHHHHHhh---C-CCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEe--CCEEEEEecCh
Confidence 4468999999999887643 2 1246778998854211 00001247899987 4566654 55799999998
No 53
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=20.23 E-value=1.7e+02 Score=25.49 Aligned_cols=40 Identities=13% Similarity=0.095 Sum_probs=33.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHhc-CCeEEEeecccCCCCCCc
Q 040700 72 LVIVAAKHESHVQATVICSKKF-GLQIRIRSGGHDYDGLSY 111 (512)
Q Consensus 72 ~~vv~p~s~~dv~~~v~~a~~~-~~~~~v~ggGh~~~g~s~ 111 (512)
...+.|.+.++++++|+.+.+. +..+.+..||.+....+.
T Consensus 46 ~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D~ 86 (172)
T 1mkz_A 46 DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQ 86 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCCC
Confidence 3578899999999999998876 688999999988765443
Done!