Query 040702
Match_columns 797
No_of_seqs 732 out of 5698
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 17:41:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040702.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040702hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 4E-56 1.4E-60 532.6 28.9 436 2-448 228-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 8.5E-52 2.9E-56 495.1 30.1 422 2-437 205-721 (768)
3 3t6q_A CD180 antigen; protein- 100.0 1.9E-50 6.6E-55 472.2 31.3 418 2-438 38-565 (606)
4 3j0a_A TOLL-like receptor 5; m 100.0 7.2E-50 2.5E-54 483.4 27.7 423 2-438 29-565 (844)
5 3vq2_A TLR4, TOLL-like recepto 100.0 3.4E-49 1.2E-53 461.6 28.6 421 2-440 37-565 (606)
6 1ziw_A TOLL-like receptor 3; i 100.0 2E-48 6.7E-53 461.4 33.4 433 2-438 30-627 (680)
7 4eco_A Uncharacterized protein 100.0 6.6E-49 2.2E-53 459.5 20.6 418 2-434 86-601 (636)
8 4ecn_A Leucine-rich repeat pro 100.0 9.2E-49 3.2E-53 465.6 21.3 423 2-440 328-873 (876)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 1E-49 3.5E-54 416.6 10.3 246 512-780 32-301 (311)
10 2z63_A TOLL-like receptor 4, v 100.0 7.6E-48 2.6E-52 446.9 24.4 420 2-440 33-538 (570)
11 3t6q_A CD180 antigen; protein- 100.0 1.1E-46 3.7E-51 440.5 29.9 402 2-414 62-564 (606)
12 4asz_A BDNF/NT-3 growth factor 100.0 4.4E-48 1.5E-52 405.7 12.1 238 512-752 13-290 (299)
13 4aoj_A High affinity nerve gro 100.0 1.4E-47 4.8E-52 407.5 14.7 238 512-752 41-320 (329)
14 4eco_A Uncharacterized protein 100.0 1.7E-46 5.8E-51 439.1 24.2 393 21-432 81-578 (636)
15 3omv_A RAF proto-oncogene seri 100.0 4.4E-47 1.5E-51 397.9 15.5 236 511-750 35-299 (307)
16 3ubd_A Ribosomal protein S6 ki 100.0 5.5E-48 1.9E-52 403.7 5.7 243 512-780 24-292 (304)
17 4gt4_A Tyrosine-protein kinase 100.0 5.5E-47 1.9E-51 399.1 13.1 235 512-749 26-304 (308)
18 2z7x_B TOLL-like receptor 1, v 100.0 7.2E-46 2.5E-50 425.1 23.0 410 2-438 5-486 (520)
19 3vq2_A TLR4, TOLL-like recepto 100.0 3.7E-45 1.3E-49 427.5 29.2 390 2-415 61-563 (606)
20 1ziw_A TOLL-like receptor 3; i 100.0 1E-44 3.5E-49 429.6 33.3 414 2-432 9-492 (680)
21 4fih_A Serine/threonine-protei 100.0 2.6E-46 8.8E-51 396.9 16.4 226 512-744 74-323 (346)
22 2z81_A CD282 antigen, TOLL-lik 100.0 7.5E-46 2.5E-50 428.1 20.5 411 2-438 31-515 (549)
23 4ecn_A Leucine-rich repeat pro 100.0 4.9E-45 1.7E-49 433.6 25.4 391 21-434 323-841 (876)
24 4b9d_A Serine/threonine-protei 100.0 2E-46 6.7E-51 398.4 11.9 230 511-745 23-277 (350)
25 4g3f_A NF-kappa-beta-inducing 100.0 4.7E-46 1.6E-50 393.8 14.5 232 511-751 57-316 (336)
26 4fie_A Serine/threonine-protei 100.0 2.6E-45 8.9E-50 398.8 16.8 226 512-744 151-400 (423)
27 2z63_A TOLL-like receptor 4, v 100.0 3.7E-44 1.3E-48 415.9 26.6 390 2-416 57-537 (570)
28 4g31_A Eukaryotic translation 100.0 2.8E-45 9.7E-50 385.1 14.0 227 512-743 5-278 (299)
29 3j0a_A TOLL-like receptor 5; m 100.0 5.6E-44 1.9E-48 431.8 26.4 416 3-434 10-540 (844)
30 4g8a_A TOLL-like receptor 4; l 100.0 2.2E-43 7.5E-48 414.7 30.3 422 2-438 57-585 (635)
31 3v47_A TOLL-like receptor 5B a 100.0 1.1E-43 3.8E-48 399.9 26.6 374 24-415 13-413 (455)
32 3hyh_A Carbon catabolite-derep 100.0 7.3E-45 2.5E-49 374.9 14.7 225 512-744 13-262 (275)
33 4ase_A Vascular endothelial gr 100.0 3.5E-45 1.2E-49 392.2 12.1 249 501-752 53-348 (353)
34 2z81_A CD282 antigen, TOLL-lik 100.0 5.4E-44 1.8E-48 412.5 21.7 391 2-415 55-515 (549)
35 3fpq_A Serine/threonine-protei 100.0 1.4E-44 4.9E-49 376.1 14.1 221 515-744 29-282 (290)
36 3hmm_A TGF-beta receptor type- 100.0 2.1E-44 7.3E-49 380.5 15.2 238 512-752 3-298 (303)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.2E-43 3.1E-47 402.9 26.9 412 2-439 36-516 (562)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.6E-42 1.6E-46 397.0 28.3 387 2-414 57-514 (562)
39 2z7x_B TOLL-like receptor 1, v 100.0 4.3E-43 1.5E-47 402.1 18.6 388 2-414 26-485 (520)
40 3v47_A TOLL-like receptor 5B a 100.0 8.5E-42 2.9E-46 384.6 26.7 367 3-390 16-412 (455)
41 3v5w_A G-protein coupled recep 100.0 9.5E-43 3.3E-47 395.0 12.6 242 511-780 188-460 (689)
42 2id5_A Lingo-1, leucine rich r 100.0 6.4E-41 2.2E-45 379.7 22.3 345 81-437 15-360 (477)
43 4f9c_A Cell division cycle 7-r 100.0 1.8E-41 6.1E-46 366.1 15.1 190 510-708 19-245 (361)
44 1o6v_A Internalin A; bacterial 100.0 1.2E-39 3.9E-44 367.9 28.4 349 18-413 43-391 (466)
45 4b99_A Mitogen-activated prote 100.0 4.9E-41 1.7E-45 366.4 12.5 228 512-744 54-344 (398)
46 4g8a_A TOLL-like receptor 4; l 100.0 7.3E-39 2.5E-43 376.2 29.1 398 2-413 81-583 (635)
47 3uto_A Twitchin; kinase, muscl 100.0 1.6E-40 5.5E-45 380.4 14.5 228 511-744 156-410 (573)
48 1o6v_A Internalin A; bacterial 100.0 5.9E-39 2E-43 362.1 26.8 340 2-388 51-390 (466)
49 1jl5_A Outer protein YOPM; leu 100.0 2.8E-39 9.5E-44 361.8 21.3 364 2-433 16-409 (454)
50 2id5_A Lingo-1, leucine rich r 100.0 6.6E-39 2.3E-43 363.1 24.5 347 24-415 14-361 (477)
51 3bz5_A Internalin-J, INLJ; leu 100.0 1.9E-38 6.6E-43 355.2 22.9 348 8-416 29-393 (457)
52 3o6n_A APL1; leucine-rich repe 100.0 7.2E-38 2.5E-42 345.0 22.0 335 52-437 44-378 (390)
53 1jl5_A Outer protein YOPM; leu 100.0 1.1E-37 3.9E-42 348.7 22.4 351 17-434 7-371 (454)
54 3s95_A LIMK-1, LIM domain kina 100.0 5.1E-38 1.8E-42 334.8 16.9 240 511-753 9-284 (310)
55 3bz5_A Internalin-J, INLJ; leu 100.0 4.4E-37 1.5E-41 344.2 25.0 333 2-394 47-395 (457)
56 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.3E-38 4.5E-43 344.4 10.2 246 510-780 21-291 (353)
57 4dc2_A Protein kinase C IOTA t 100.0 6.3E-38 2.1E-42 343.0 15.0 223 511-739 51-307 (396)
58 2qkw_B Protein kinase; three-h 100.0 2.3E-38 7.8E-43 339.3 11.1 250 502-754 29-318 (321)
59 1o6l_A RAC-beta serine/threoni 100.0 8.3E-38 2.8E-42 335.9 15.2 228 511-744 4-260 (337)
60 3fxz_A Serine/threonine-protei 100.0 1.9E-37 6.6E-42 328.0 17.7 227 511-744 19-269 (297)
61 3oja_B Anopheles plasmodium-re 100.0 5.3E-37 1.8E-41 356.7 22.5 334 77-437 51-384 (597)
62 4aw2_A Serine/threonine-protei 100.0 2.4E-38 8.1E-43 351.0 10.3 270 503-781 65-350 (437)
63 1xjd_A Protein kinase C, theta 100.0 7.8E-38 2.7E-42 337.0 13.8 243 508-780 13-280 (345)
64 3kex_A Receptor tyrosine-prote 100.0 1E-37 3.5E-42 334.7 14.2 266 512-781 13-306 (325)
65 3uim_A Brassinosteroid insensi 100.0 1.7E-37 5.8E-42 333.3 15.6 251 497-748 15-308 (326)
66 3o6n_A APL1; leucine-rich repe 100.0 1.2E-36 4.3E-41 335.1 22.1 309 19-362 43-352 (390)
67 2psq_A Fibroblast growth facto 100.0 2.6E-37 8.9E-42 337.2 16.3 240 511-753 80-366 (370)
68 3soc_A Activin receptor type-2 100.0 1.6E-37 5.3E-42 332.8 14.2 236 511-752 23-319 (322)
69 2i0e_A Protein kinase C-beta I 100.0 9.6E-38 3.3E-42 337.4 11.9 245 510-780 18-287 (353)
70 3a8x_A Protein kinase C IOTA t 100.0 8.3E-38 2.8E-42 337.4 11.2 224 511-740 8-265 (345)
71 4fr4_A YANK1, serine/threonine 100.0 2.9E-37 9.8E-42 336.7 15.3 222 511-739 14-265 (384)
72 3v8s_A RHO-associated protein 100.0 1.9E-37 6.4E-42 341.2 13.7 202 504-711 61-274 (410)
73 2yab_A Death-associated protei 100.0 5.2E-37 1.8E-41 332.7 17.0 227 511-744 11-272 (361)
74 3niz_A Rhodanese family protei 100.0 3.6E-37 1.2E-41 328.2 14.7 239 511-780 20-311 (311)
75 1fot_A TPK1 delta, CAMP-depend 100.0 5E-37 1.7E-41 327.4 15.5 241 511-780 5-269 (318)
76 2c30_A Serine/threonine-protei 100.0 1.3E-36 4.3E-41 325.4 18.4 238 500-744 23-294 (321)
77 3kul_A Ephrin type-A receptor 100.0 2.9E-37 1E-41 330.9 13.2 241 512-755 49-317 (325)
78 3tt0_A Basic fibroblast growth 100.0 6.1E-37 2.1E-41 336.2 15.9 240 511-753 68-354 (382)
79 4fmz_A Internalin; leucine ric 100.0 8.8E-36 3E-40 322.9 24.4 305 51-410 42-346 (347)
80 3vhe_A Vascular endothelial gr 100.0 4E-37 1.4E-41 335.1 13.4 251 499-752 9-356 (359)
81 1rdq_E PKA C-alpha, CAMP-depen 100.0 6E-37 2E-41 331.2 14.3 219 511-738 40-282 (350)
82 3p86_A Serine/threonine-protei 100.0 4.8E-37 1.6E-41 326.7 13.0 239 509-752 34-299 (309)
83 3ugc_A Tyrosine-protein kinase 100.0 3.3E-37 1.1E-41 326.1 11.5 238 511-751 9-291 (295)
84 3fe3_A MAP/microtubule affinit 100.0 6.3E-37 2.1E-41 328.1 13.6 228 511-745 14-265 (328)
85 2nru_A Interleukin-1 receptor- 100.0 3E-36 1E-40 320.7 18.7 249 498-750 11-305 (307)
86 3zgw_A Maternal embryonic leuc 100.0 7.6E-37 2.6E-41 329.4 14.0 232 511-747 9-263 (347)
87 3cbl_A C-FES, proto-oncogene t 100.0 2.7E-37 9.3E-42 338.3 10.6 240 510-752 112-375 (377)
88 4fmz_A Internalin; leucine ric 100.0 2E-35 7E-40 320.0 24.8 307 17-386 40-346 (347)
89 2qol_A Ephrin receptor; recept 100.0 8E-37 2.7E-41 333.6 13.7 240 511-753 44-311 (373)
90 2r5t_A Serine/threonine-protei 100.0 4.2E-37 1.4E-41 334.8 11.2 224 511-740 37-285 (373)
91 3lb7_A RAF proto-oncogene seri 100.0 2.2E-36 7.4E-41 321.4 15.7 238 511-752 35-301 (307)
92 3c4z_A Rhodopsin kinase; Ser/T 100.0 8.3E-37 2.8E-41 345.8 13.2 224 511-739 184-438 (543)
93 4hcu_A Tyrosine-protein kinase 100.0 1.4E-36 4.6E-41 316.8 13.7 236 511-751 9-266 (269)
94 2vd5_A DMPK protein; serine/th 100.0 4.5E-37 1.6E-41 338.3 10.6 205 502-710 51-270 (412)
95 3l9p_A Anaplastic lymphoma kin 100.0 3.3E-37 1.1E-41 336.1 9.3 241 511-754 70-348 (367)
96 3poz_A Epidermal growth factor 100.0 1E-36 3.6E-41 327.1 12.8 242 511-756 14-283 (327)
97 1kob_A Twitchin; kinase, intra 100.0 2.5E-36 8.5E-41 330.4 15.4 228 511-744 50-304 (387)
98 3oja_B Anopheles plasmodium-re 100.0 1.7E-35 5.7E-40 344.1 23.2 314 100-437 49-362 (597)
99 2acx_A G protein-coupled recep 100.0 1.4E-36 4.7E-41 344.6 13.5 222 511-738 183-433 (576)
100 3a62_A Ribosomal protein S6 ki 100.0 5.5E-37 1.9E-41 329.1 9.6 223 511-739 16-266 (327)
101 1tki_A Titin; serine kinase, m 100.0 3.3E-36 1.1E-40 321.9 15.5 229 511-746 4-259 (321)
102 2izr_A Casein kinase I isoform 100.0 7.2E-36 2.5E-40 321.1 18.0 236 511-752 8-282 (330)
103 4ejn_A RAC-alpha serine/threon 100.0 9E-37 3.1E-41 342.0 10.5 227 511-743 147-403 (446)
104 3tki_A Serine/threonine-protei 100.0 1.7E-36 5.7E-41 324.7 12.1 231 511-745 6-262 (323)
105 2pmi_A Negative RE, cyclin-dep 100.0 4.3E-36 1.5E-40 320.8 15.0 246 510-786 3-310 (317)
106 1csn_A Casein kinase-1; phosph 100.0 2.9E-35 1E-39 311.5 20.8 236 511-752 9-284 (298)
107 3qd2_B Eukaryotic translation 100.0 8.6E-36 3E-40 320.7 16.7 231 511-744 5-325 (332)
108 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.6E-36 1.2E-40 322.8 13.6 228 511-746 8-260 (336)
109 1luf_A Muscle-specific tyrosin 100.0 1.5E-36 5E-41 328.5 10.6 241 509-752 44-336 (343)
110 2ivs_A Proto-oncogene tyrosine 100.0 4.4E-36 1.5E-40 320.4 14.1 238 511-751 22-311 (314)
111 3soa_A Calcium/calmodulin-depe 100.0 6.7E-36 2.3E-40 332.6 15.9 229 510-744 9-267 (444)
112 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.2E-36 1.1E-40 313.8 12.5 236 511-751 7-264 (268)
113 2y0a_A Death-associated protei 100.0 1.1E-35 3.7E-40 318.9 16.8 227 511-744 10-271 (326)
114 4fvq_A Tyrosine-protein kinase 100.0 3E-36 1E-40 317.7 12.0 232 511-751 7-275 (289)
115 4eqm_A Protein kinase; transfe 100.0 3.9E-36 1.3E-40 317.5 12.8 234 511-749 10-273 (294)
116 1rjb_A FL cytokine receptor; k 100.0 8.4E-36 2.9E-40 322.6 15.5 240 510-752 43-335 (344)
117 3pfq_A PKC-B, PKC-beta, protei 100.0 3.7E-36 1.3E-40 351.9 13.5 246 510-781 339-609 (674)
118 3gni_B Strad alpha; kinase fol 100.0 7.1E-36 2.4E-40 328.8 14.4 231 511-744 24-333 (389)
119 1t46_A HOMO sapiens V-KIT hard 100.0 7.5E-36 2.6E-40 318.5 14.0 239 511-752 22-308 (313)
120 3gen_A Tyrosine-protein kinase 100.0 6.6E-36 2.3E-40 314.1 13.2 238 510-752 22-281 (283)
121 3o0g_A Cell division protein k 100.0 1.7E-35 5.6E-40 312.5 16.3 227 512-744 2-282 (292)
122 3rp9_A Mitogen-activated prote 100.0 6.1E-36 2.1E-40 336.6 13.3 189 511-704 52-278 (458)
123 3lzb_A Epidermal growth factor 100.0 8.3E-36 2.8E-40 319.9 13.6 241 511-755 14-282 (327)
124 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.8E-36 9.5E-41 324.1 9.9 240 509-780 31-329 (329)
125 3c0i_A Peripheral plasma membr 100.0 7.5E-36 2.6E-40 323.5 13.3 229 511-744 23-286 (351)
126 4e5w_A Tyrosine-protein kinase 100.0 1.5E-35 5.1E-40 314.5 15.2 236 512-750 21-301 (302)
127 1mp8_A Focal adhesion kinase 1 100.0 4.7E-36 1.6E-40 314.8 11.2 238 511-753 14-278 (281)
128 3q4u_A Activin receptor type-1 100.0 1.5E-35 5.2E-40 314.2 15.0 234 511-749 7-300 (301)
129 2ac3_A MAP kinase-interacting 100.0 1.3E-35 4.6E-40 317.0 14.5 230 511-744 11-295 (316)
130 2pvf_A Fibroblast growth facto 100.0 1.4E-35 4.7E-40 319.5 14.5 241 511-754 34-321 (334)
131 3qup_A Tyrosine-protein kinase 100.0 7.1E-36 2.4E-40 320.2 12.1 240 510-752 21-299 (323)
132 2ft3_A Biglycan; proteoglycan, 100.0 3.2E-34 1.1E-38 308.5 24.9 287 22-359 34-330 (332)
133 3op5_A Serine/threonine-protei 100.0 1.8E-35 6.1E-40 322.5 15.4 238 511-752 34-330 (364)
134 2bdw_A Hypothetical protein K1 100.0 1E-35 3.5E-40 323.5 13.2 229 510-745 27-285 (362)
135 1k9a_A Carboxyl-terminal SRC k 100.0 2.3E-35 7.9E-40 330.4 16.0 233 510-752 191-446 (450)
136 2zv2_A Calcium/calmodulin-depe 100.0 1.7E-35 5.9E-40 313.4 14.2 227 511-744 12-292 (298)
137 2x4f_A Myosin light chain kina 100.0 1.3E-35 4.6E-40 323.7 13.7 224 515-744 92-342 (373)
138 2ft3_A Biglycan; proteoglycan, 100.0 4.3E-34 1.5E-38 307.5 25.2 289 77-408 33-331 (332)
139 4euu_A Serine/threonine-protei 100.0 2.7E-35 9.3E-40 315.1 15.7 232 511-748 8-306 (319)
140 3og7_A AKAP9-BRAF fusion prote 100.0 7.7E-36 2.6E-40 314.6 11.0 236 511-750 23-287 (289)
141 1p4o_A Insulin-like growth fac 100.0 3.3E-36 1.1E-40 322.6 8.3 245 502-749 15-297 (322)
142 1xku_A Decorin; proteoglycan, 100.0 6.5E-34 2.2E-38 305.9 26.2 290 21-360 31-330 (330)
143 3dls_A PAS domain-containing s 100.0 3.3E-35 1.1E-39 316.1 16.0 229 510-745 22-275 (335)
144 4f0f_A Serine/threonine-protei 100.0 4.6E-35 1.6E-39 308.3 16.5 228 511-748 18-286 (287)
145 2xir_A Vascular endothelial gr 100.0 9.6E-36 3.3E-40 318.1 11.4 249 501-752 16-311 (316)
146 3lxl_A Tyrosine-protein kinase 100.0 1.5E-35 5E-40 318.3 12.8 239 511-752 22-304 (327)
147 1ob3_A PFPK5, cell division co 100.0 1.2E-35 4.2E-40 312.9 11.9 227 512-744 2-280 (288)
148 4agu_A Cyclin-dependent kinase 100.0 2.3E-35 8E-40 314.4 14.1 227 512-744 3-284 (311)
149 3dtc_A Mitogen-activated prote 100.0 1.3E-35 4.5E-40 309.6 11.8 229 511-748 6-270 (271)
150 3uc3_A Serine/threonine-protei 100.0 3.1E-35 1.1E-39 319.7 15.2 228 511-746 19-276 (361)
151 3mtl_A Cell division protein k 100.0 4.5E-36 1.5E-40 321.7 8.4 227 512-744 2-281 (324)
152 3p1a_A MYT1 kinase, membrane-a 100.0 3.1E-35 1.1E-39 313.3 14.8 225 512-744 57-304 (311)
153 3n9x_A Phosphotransferase; mal 100.0 1.7E-35 5.7E-40 329.9 13.3 189 511-704 25-246 (432)
154 2i1m_A Macrophage colony-stimu 100.0 6.2E-36 2.1E-40 322.1 9.4 241 510-753 44-328 (333)
155 1opk_A P150, C-ABL, proto-onco 100.0 2E-35 6.7E-40 334.7 13.6 235 510-749 218-476 (495)
156 3lxp_A Non-receptor tyrosine-p 100.0 5.3E-35 1.8E-39 312.6 16.2 237 513-754 32-313 (318)
157 3t9t_A Tyrosine-protein kinase 100.0 2.2E-35 7.5E-40 307.2 12.7 236 511-751 7-264 (267)
158 1mqb_A Ephrin type-A receptor 100.0 3.7E-35 1.3E-39 315.8 14.8 240 512-754 44-312 (333)
159 2w1i_A JAK2; chromosomal rearr 100.0 3.5E-35 1.2E-39 315.2 14.6 239 511-752 40-323 (326)
160 2w4o_A Calcium/calmodulin-depe 100.0 2.9E-35 9.8E-40 318.5 13.7 226 510-744 51-305 (349)
161 2y94_A 5'-AMP-activated protei 100.0 5.7E-35 1.9E-39 327.2 16.3 228 511-745 15-267 (476)
162 3mdy_A Bone morphogenetic prot 100.0 1.1E-34 3.8E-39 312.8 18.0 238 508-753 33-333 (337)
163 3g33_A Cell division protein k 100.0 1.2E-34 4.2E-39 308.4 17.9 228 510-744 7-296 (308)
164 3kmu_A ILK, integrin-linked ki 100.0 2.9E-35 1E-39 306.8 12.7 230 511-750 9-269 (271)
165 3c1x_A Hepatocyte growth facto 100.0 2.1E-35 7.3E-40 322.0 12.1 238 512-752 89-356 (373)
166 3g2f_A Bone morphogenetic prot 100.0 5.2E-35 1.8E-39 315.3 15.0 244 511-762 12-329 (336)
167 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5E-35 1.7E-39 319.2 14.8 237 510-752 63-340 (365)
168 3cc6_A Protein tyrosine kinase 100.0 2.6E-35 8.8E-40 309.2 11.9 240 510-754 10-276 (281)
169 3kn6_A Ribosomal protein S6 ki 100.0 4.1E-35 1.4E-39 314.1 13.6 219 517-744 16-270 (325)
170 2eva_A TAK1 kinase - TAB1 chim 100.0 5.2E-35 1.8E-39 311.0 14.2 233 511-752 7-264 (307)
171 3f66_A Hepatocyte growth facto 100.0 4.1E-35 1.4E-39 310.4 13.1 239 511-752 24-292 (298)
172 1xku_A Decorin; proteoglycan, 100.0 1.2E-33 4E-38 303.8 24.5 295 77-408 31-330 (330)
173 3brb_A Proto-oncogene tyrosine 100.0 1E-34 3.5E-39 309.7 16.0 242 508-752 30-309 (313)
174 2qr7_A Ribosomal protein S6 ki 100.0 3.8E-35 1.3E-39 316.2 12.7 226 510-745 20-278 (342)
175 2a2a_A Death-associated protei 100.0 1.1E-34 3.9E-39 310.5 16.3 227 511-744 11-272 (321)
176 1u59_A Tyrosine-protein kinase 100.0 8.6E-35 2.9E-39 306.2 15.1 242 511-756 8-277 (287)
177 1xbb_A Tyrosine-protein kinase 100.0 4.3E-35 1.5E-39 309.2 12.7 238 510-752 14-280 (291)
178 1qcf_A Haematopoetic cell kina 100.0 1.9E-35 6.5E-40 331.7 10.6 235 509-749 185-442 (454)
179 3f3z_A Calcium/calmodulin-depe 100.0 8.5E-35 2.9E-39 304.5 14.9 227 511-745 8-262 (277)
180 3kfa_A Tyrosine-protein kinase 100.0 7.8E-35 2.7E-39 306.7 14.6 238 510-752 11-272 (288)
181 3i6u_A CDS1, serine/threonine- 100.0 5.4E-35 1.8E-39 324.3 13.8 227 510-744 133-399 (419)
182 4hgt_A Casein kinase I isoform 100.0 2.5E-34 8.5E-39 304.0 18.1 237 510-752 7-281 (296)
183 2wqm_A Serine/threonine-protei 100.0 5.9E-35 2E-39 311.1 13.3 241 511-756 31-302 (310)
184 3dbq_A Dual specificity protei 100.0 5.5E-35 1.9E-39 315.9 13.0 230 511-746 8-275 (343)
185 3cok_A Serine/threonine-protei 100.0 5.8E-35 2E-39 306.0 12.7 229 511-744 10-262 (278)
186 3pls_A Macrophage-stimulating 100.0 6.4E-35 2.2E-39 308.9 13.1 237 513-752 22-288 (298)
187 3ork_A Serine/threonine protei 100.0 3.7E-35 1.3E-39 312.8 11.0 230 511-744 11-273 (311)
188 3fdn_A Serine/threonine-protei 100.0 6.8E-35 2.3E-39 305.7 12.6 229 510-746 7-259 (279)
189 3uzp_A CKI-delta, CKID, casein 100.0 4.3E-34 1.5E-38 302.2 18.5 236 511-752 8-281 (296)
190 1u5q_A Serine/threonine protei 100.0 5.7E-35 2E-39 315.8 12.0 226 511-746 53-307 (348)
191 3sv0_A Casein kinase I-like; t 100.0 2.8E-34 9.5E-39 322.2 17.9 236 511-752 6-279 (483)
192 1ua2_A CAK, cell division prot 100.0 7.2E-35 2.4E-39 315.4 12.7 232 508-745 6-292 (346)
193 3oz6_A Mitogen-activated prote 100.0 8.1E-35 2.8E-39 320.2 13.2 230 510-745 7-329 (388)
194 2jii_A Serine/threonine-protei 100.0 1E-34 3.5E-39 315.0 13.7 232 512-752 42-337 (352)
195 2a19_B Interferon-induced, dou 100.0 1.7E-34 5.7E-39 303.4 14.7 233 510-752 9-275 (284)
196 3kk8_A Calcium/calmodulin depe 100.0 1.3E-34 4.4E-39 304.3 13.8 228 511-745 5-262 (284)
197 3nsz_A CK II alpha, casein kin 100.0 1.9E-34 6.6E-39 310.0 15.4 220 511-743 35-318 (330)
198 2eue_A Carbon catabolite derep 100.0 9.6E-35 3.3E-39 303.8 12.7 226 512-745 13-263 (275)
199 4eut_A Serine/threonine-protei 100.0 8.6E-35 2.9E-39 320.6 12.9 234 511-750 8-308 (396)
200 1nxk_A MAP kinase-activated pr 100.0 1.5E-34 5E-39 318.6 14.7 226 511-747 60-324 (400)
201 2yfx_A Tyrosine-protein kinase 100.0 4.5E-35 1.5E-39 314.5 10.4 241 511-754 29-307 (327)
202 3hko_A Calcium/calmodulin-depe 100.0 1.1E-34 3.6E-39 314.1 13.3 235 507-744 21-330 (345)
203 3gxj_A TGF-beta receptor type- 100.0 1.3E-35 4.3E-40 315.1 5.7 235 512-751 3-297 (303)
204 2zmd_A Dual specificity protei 100.0 1.3E-34 4.3E-39 318.2 13.7 228 512-745 56-321 (390)
205 2ozo_A Tyrosine-protein kinase 100.0 2.3E-34 7.8E-39 333.7 16.4 236 513-752 336-599 (613)
206 1qpc_A LCK kinase; alpha beta 100.0 7.5E-35 2.6E-39 305.3 11.1 236 511-752 12-270 (279)
207 2yex_A Serine/threonine-protei 100.0 1.9E-34 6.5E-39 301.6 14.1 231 510-744 5-261 (276)
208 2v62_A Serine/threonine-protei 100.0 1.1E-34 3.7E-39 313.9 12.4 233 512-749 37-326 (345)
209 1fvr_A Tyrosine-protein kinase 100.0 2.7E-34 9.3E-39 308.4 15.5 235 512-752 25-301 (327)
210 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.9E-35 1.7E-39 328.0 10.0 235 510-750 182-439 (452)
211 3ttj_A Mitogen-activated prote 100.0 1E-34 3.4E-39 325.7 12.4 224 511-744 61-355 (464)
212 3is5_A Calcium-dependent prote 100.0 2.1E-34 7.2E-39 302.9 14.0 227 511-744 21-278 (285)
213 3llt_A Serine/threonine kinase 100.0 6.5E-35 2.2E-39 317.8 10.3 202 499-710 22-259 (360)
214 2buj_A Serine/threonine-protei 100.0 1.9E-34 6.5E-39 308.2 13.8 237 511-750 28-305 (317)
215 1vzo_A Ribosomal protein S6 ki 100.0 5.1E-35 1.8E-39 317.4 9.4 229 511-744 53-321 (355)
216 4aaa_A Cyclin-dependent kinase 100.0 1.9E-34 6.5E-39 310.2 13.2 228 511-744 24-306 (331)
217 3lm5_A Serine/threonine-protei 100.0 1.5E-34 5E-39 310.4 12.0 230 508-743 24-286 (327)
218 3mi9_A Cell division protein k 100.0 4.8E-34 1.6E-38 309.7 15.9 230 511-744 16-311 (351)
219 1byg_A CSK, protein (C-termina 100.0 5.3E-35 1.8E-39 306.3 8.1 232 511-752 20-274 (278)
220 3bhy_A Death-associated protei 100.0 5.5E-34 1.9E-38 299.4 15.8 227 512-745 5-266 (283)
221 1ogq_A PGIP-2, polygalacturona 100.0 4.7E-34 1.6E-38 304.1 15.2 255 179-438 50-309 (313)
222 2rku_A Serine/threonine-protei 100.0 2.4E-34 8.2E-39 303.9 12.8 230 511-746 14-267 (294)
223 1x8b_A WEE1HU, WEE1-like prote 100.0 3.5E-34 1.2E-38 301.5 14.0 226 510-744 9-279 (289)
224 2jam_A Calcium/calmodulin-depe 100.0 3.5E-34 1.2E-38 304.3 14.0 227 511-745 8-262 (304)
225 3com_A Serine/threonine-protei 100.0 5.5E-34 1.9E-38 304.2 15.3 228 510-744 27-278 (314)
226 2h34_A Serine/threonine-protei 100.0 2.9E-34 1E-38 305.5 13.0 234 511-749 33-294 (309)
227 2vgo_A Serine/threonine-protei 100.0 4.3E-34 1.5E-38 300.4 14.1 227 511-745 13-263 (284)
228 3eqc_A Dual specificity mitoge 100.0 1.3E-34 4.4E-39 315.3 10.5 227 511-745 32-325 (360)
229 3byv_A Rhoptry kinase; malaria 100.0 6E-35 2.1E-39 319.8 7.9 224 511-744 72-359 (377)
230 1u46_A ACK-1, activated CDC42 100.0 2.1E-34 7.1E-39 303.8 11.5 237 511-751 17-284 (291)
231 3mwu_A Calmodulin-domain prote 100.0 8.9E-34 3E-38 321.3 17.4 227 511-745 21-277 (486)
232 1b6c_B TGF-B superfamily recep 100.0 1.3E-33 4.4E-38 305.2 17.8 241 507-752 37-337 (342)
233 3pg1_A Mitogen-activated prote 100.0 4.1E-34 1.4E-38 311.6 13.9 236 502-744 12-316 (362)
234 3a7i_A MST3 kinase, serine/thr 100.0 8.7E-34 3E-38 301.0 16.0 230 511-747 21-273 (303)
235 3ll6_A Cyclin G-associated kin 100.0 8.9E-34 3E-38 305.6 16.3 238 511-752 27-309 (337)
236 3lij_A Calcium/calmodulin depe 100.0 5.6E-34 1.9E-38 323.4 15.4 227 511-745 36-292 (494)
237 2owb_A Serine/threonine-protei 100.0 3.8E-34 1.3E-38 308.3 13.2 229 511-745 40-292 (335)
238 2clq_A Mitogen-activated prote 100.0 1.2E-33 4.1E-38 298.6 16.9 227 513-744 23-278 (295)
239 2j7t_A Serine/threonine-protei 100.0 1.7E-34 5.9E-39 306.3 10.3 228 511-743 18-274 (302)
240 1phk_A Phosphorylase kinase; g 100.0 4.7E-34 1.6E-38 302.3 13.5 228 510-744 15-283 (298)
241 4fl3_A Tyrosine-protein kinase 100.0 3.2E-34 1.1E-38 333.3 13.4 228 518-750 375-630 (635)
242 2pml_X PFPK7, Ser/Thr protein 100.0 2.5E-34 8.5E-39 311.6 11.5 226 511-743 30-321 (348)
243 3q60_A ROP5B; pseudokinase, tr 100.0 4.9E-35 1.7E-39 319.9 5.9 225 511-744 61-352 (371)
244 2y7j_A Phosphorylase B kinase 100.0 1.3E-33 4.6E-38 307.4 16.8 234 504-744 86-359 (365)
245 3q5i_A Protein kinase; CDPK, m 100.0 8.4E-34 2.9E-38 322.8 15.9 227 511-745 35-302 (504)
246 1zy4_A Serine/threonine-protei 100.0 5.8E-34 2E-38 302.1 13.0 230 510-744 4-283 (303)
247 2h6d_A 5'-AMP-activated protei 100.0 7.9E-34 2.7E-38 297.0 13.5 228 511-745 10-262 (276)
248 2h8h_A Proto-oncogene tyrosine 100.0 1.6E-34 5.5E-39 330.3 8.9 234 510-749 265-521 (535)
249 1cm8_A Phosphorylated MAP kina 100.0 6.9E-34 2.4E-38 309.8 13.1 223 511-744 24-307 (367)
250 3eb0_A Putative uncharacterize 100.0 1.1E-33 3.8E-38 310.5 14.8 232 508-750 3-329 (383)
251 3nyv_A Calmodulin-domain prote 100.0 4E-34 1.4E-38 324.2 11.2 227 511-745 25-282 (484)
252 1t4h_A Serine/threonine-protei 100.0 1.4E-33 4.8E-38 297.4 14.4 223 513-744 27-282 (290)
253 3qyz_A Mitogen-activated prote 100.0 1.2E-33 4E-38 308.2 14.1 229 511-745 26-314 (364)
254 4e7w_A Glycogen synthase kinas 100.0 8.4E-34 2.9E-38 312.2 13.0 224 511-744 39-321 (394)
255 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.8E-34 9.5E-39 307.2 8.4 239 510-752 31-303 (319)
256 2xrw_A Mitogen-activated prote 100.0 1E-33 3.5E-38 309.3 12.9 225 511-745 24-319 (371)
257 2j0j_A Focal adhesion kinase 1 100.0 1.3E-33 4.3E-38 329.5 14.4 237 511-752 389-652 (656)
258 2wtk_C Serine/threonine-protei 100.0 2.6E-33 9.1E-38 297.6 15.5 231 511-745 4-264 (305)
259 2x7f_A TRAF2 and NCK-interacti 100.0 4.1E-34 1.4E-38 306.9 8.8 238 501-744 13-286 (326)
260 2r3i_A Cell division protein k 100.0 1.4E-33 4.9E-38 298.7 12.7 227 512-744 3-283 (299)
261 2ycf_A Serine/threonine-protei 100.0 1.6E-33 5.5E-38 301.7 12.8 227 510-744 8-274 (322)
262 2w5a_A Serine/threonine-protei 100.0 3E-34 1E-38 300.7 6.9 231 511-746 5-269 (279)
263 2vwi_A Serine/threonine-protei 100.0 3.9E-34 1.3E-38 303.6 7.7 232 510-744 13-287 (303)
264 3kvw_A DYRK2, dual specificity 100.0 2E-33 6.9E-38 312.5 13.7 189 511-709 96-298 (429)
265 2i6l_A Mitogen-activated prote 100.0 2.1E-33 7.2E-38 300.4 13.3 228 511-744 10-305 (320)
266 3p23_A Serine/threonine-protei 100.0 1.1E-33 3.7E-38 314.4 11.1 228 510-744 22-283 (432)
267 1z7x_W Ribonuclease inhibitor; 100.0 4.4E-36 1.5E-40 338.5 -9.0 363 20-411 2-412 (461)
268 1wak_A Serine/threonine-protei 100.0 1.9E-33 6.6E-38 310.3 12.0 224 511-744 36-391 (397)
269 1blx_A Cyclin-dependent kinase 100.0 6.3E-33 2.2E-37 297.6 15.7 228 510-744 9-296 (326)
270 2b9h_A MAP kinase FUS3, mitoge 100.0 2.7E-33 9.4E-38 304.0 12.1 229 511-745 10-306 (353)
271 3fme_A Dual specificity mitoge 100.0 1.5E-33 5E-38 297.2 9.6 227 511-744 6-266 (290)
272 1ogq_A PGIP-2, polygalacturona 100.0 6.5E-33 2.2E-37 295.3 14.7 250 77-360 50-302 (313)
273 2eu9_A Dual specificity protei 100.0 5.6E-33 1.9E-37 301.7 14.1 190 511-710 18-239 (355)
274 3rgf_A Cyclin-dependent kinase 100.0 2.5E-33 8.5E-38 310.1 11.4 228 512-745 20-334 (405)
275 1z7x_W Ribonuclease inhibitor; 100.0 1.4E-35 4.7E-40 334.5 -6.9 357 53-433 3-411 (461)
276 3an0_A Dual specificity mitoge 100.0 1.5E-33 5E-38 304.5 9.3 228 511-745 50-311 (340)
277 2fst_X Mitogen-activated prote 100.0 1.1E-33 3.8E-38 307.8 8.2 224 511-745 28-312 (367)
278 3e3p_A Protein kinase, putativ 100.0 1E-32 3.4E-37 300.4 15.7 234 505-744 16-314 (360)
279 1j1b_A Glycogen synthase kinas 100.0 6.2E-33 2.1E-37 307.9 13.9 223 511-744 53-336 (420)
280 3a99_A Proto-oncogene serine/t 100.0 8.8E-33 3E-37 295.6 14.1 227 510-744 41-293 (320)
281 1z57_A Dual specificity protei 100.0 9.3E-33 3.2E-37 297.8 13.8 188 511-708 13-232 (339)
282 2vx3_A Dual specificity tyrosi 100.0 1.3E-32 4.6E-37 301.7 15.0 192 510-709 52-257 (382)
283 3cek_A Dual specificity protei 100.0 9.5E-33 3.2E-37 294.5 13.2 231 509-745 25-293 (313)
284 4exu_A Mitogen-activated prote 100.0 6.2E-33 2.1E-37 303.0 11.8 223 511-745 41-324 (371)
285 2iwi_A Serine/threonine-protei 100.0 7E-33 2.4E-37 295.3 11.1 231 506-744 25-283 (312)
286 2wei_A Calmodulin-domain prote 100.0 1E-32 3.4E-37 290.4 12.0 228 510-745 20-277 (287)
287 3fhr_A MAP kinase-activated pr 100.0 1.9E-32 6.4E-37 295.0 13.8 224 511-746 27-289 (336)
288 3aln_A Dual specificity mitoge 100.0 1.5E-32 5.1E-37 294.9 11.3 228 511-745 21-286 (327)
289 1q8y_A SR protein kinase; tran 100.0 1.7E-32 5.7E-37 300.2 11.9 225 511-745 18-334 (373)
290 2rio_A Serine/threonine-protei 100.0 1.6E-32 5.6E-37 305.8 11.8 226 512-744 15-295 (434)
291 3coi_A Mitogen-activated prote 100.0 1.5E-32 5.2E-37 298.1 10.3 223 511-745 23-306 (353)
292 3qa8_A MGC80376 protein; kinas 100.0 5E-32 1.7E-36 310.0 11.6 237 511-753 13-308 (676)
293 2dyl_A Dual specificity mitoge 100.0 4E-32 1.4E-36 290.3 10.0 228 511-745 24-284 (318)
294 2z80_A TOLL-like receptor 2, v 100.0 5.4E-31 1.8E-35 285.8 15.7 278 20-341 30-317 (353)
295 2pzi_A Probable serine/threoni 100.0 1.6E-31 5.5E-36 314.9 11.8 224 512-749 80-326 (681)
296 2vuw_A Serine/threonine-protei 100.0 6.5E-32 2.2E-36 291.0 7.7 178 511-700 19-266 (336)
297 2z80_A TOLL-like receptor 2, v 100.0 5.3E-31 1.8E-35 285.9 14.3 280 51-366 29-318 (353)
298 3uqc_A Probable conserved tran 100.0 1.7E-30 5.9E-35 272.7 14.5 207 512-754 31-268 (286)
299 2z66_A Variable lymphocyte rec 100.0 1.6E-30 5.3E-35 276.3 14.1 249 55-338 9-261 (306)
300 2z66_A Variable lymphocyte rec 100.0 6.7E-30 2.3E-34 271.4 17.5 280 23-348 9-297 (306)
301 3zyi_A Leucine-rich repeat-con 100.0 2.4E-29 8.1E-34 282.4 22.2 246 23-314 56-303 (452)
302 3zyj_A Leucine-rich repeat-con 100.0 2.4E-29 8.2E-34 281.3 21.8 246 23-314 45-292 (440)
303 3dzo_A Rhoptry kinase domain; 100.0 1.1E-30 3.9E-35 289.0 9.8 224 511-744 77-363 (413)
304 1ozn_A Reticulon 4 receptor; N 100.0 2.2E-29 7.4E-34 264.6 17.8 223 56-314 14-238 (285)
305 3m2w_A MAP kinase-activated pr 100.0 9.6E-30 3.3E-34 269.3 15.1 204 511-746 16-258 (299)
306 3g06_A SSPH2 (leucine-rich rep 100.0 3.1E-28 1.1E-32 280.4 27.6 267 55-397 42-308 (622)
307 3zyj_A Leucine-rich repeat-con 100.0 9.2E-29 3.1E-33 276.6 22.3 248 78-362 44-292 (440)
308 1ozn_A Reticulon 4 receptor; N 100.0 2.6E-29 8.8E-34 264.0 16.4 227 21-267 11-238 (285)
309 3zyi_A Leucine-rich repeat-con 100.0 9.1E-29 3.1E-33 277.6 21.5 242 3-290 60-302 (452)
310 3g06_A SSPH2 (leucine-rich rep 100.0 2.1E-28 7.1E-33 281.9 24.8 269 21-373 40-308 (622)
311 3o53_A Protein LRIM1, AGAP0063 100.0 1.1E-30 3.8E-35 278.7 3.3 253 83-357 16-270 (317)
312 3o53_A Protein LRIM1, AGAP0063 100.0 1.8E-30 6.1E-35 277.1 4.7 247 51-343 32-281 (317)
313 4fcg_A Uncharacterized protein 100.0 8.2E-29 2.8E-33 265.2 17.0 228 20-293 80-316 (328)
314 1wwl_A Monocyte differentiatio 100.0 6.2E-30 2.1E-34 272.3 4.1 250 50-338 40-309 (312)
315 1wwl_A Monocyte differentiatio 100.0 4.3E-30 1.5E-34 273.5 1.3 252 16-315 38-310 (312)
316 4fcg_A Uncharacterized protein 100.0 6.8E-28 2.3E-32 258.0 17.9 235 149-410 80-314 (328)
317 4azs_A Methyltransferase WBDD; 99.9 1.3E-28 4.6E-33 281.7 7.4 160 531-700 258-428 (569)
318 3oja_A Leucine-rich immune mol 99.9 3E-28 1E-32 275.1 8.1 122 233-357 147-270 (487)
319 3oja_A Leucine-rich immune mol 99.9 8.4E-28 2.9E-32 271.4 9.5 235 102-381 34-270 (487)
320 3ogk_B Coronatine-insensitive 99.9 2.2E-30 7.5E-35 301.5 -12.6 305 100-411 190-527 (592)
321 3ogk_B Coronatine-insensitive 99.9 3.3E-29 1.1E-33 291.6 -3.8 408 13-432 65-525 (592)
322 2z62_A TOLL-like receptor 4, v 99.9 1.2E-25 4.1E-30 234.8 21.2 208 78-315 29-238 (276)
323 2z62_A TOLL-like receptor 4, v 99.9 6.8E-26 2.3E-30 236.7 19.1 213 42-290 19-236 (276)
324 2o6q_A Variable lymphocyte rec 99.9 1.7E-25 5.8E-30 232.8 20.6 203 21-267 16-218 (270)
325 3rfs_A Internalin B, repeat mo 99.9 1.9E-25 6.5E-30 232.6 16.7 220 5-254 27-246 (272)
326 2o6q_A Variable lymphocyte rec 99.9 6.2E-25 2.1E-29 228.5 19.8 200 79-314 18-218 (270)
327 1p9a_G Platelet glycoprotein I 99.9 6.4E-25 2.2E-29 230.5 19.9 203 73-314 6-208 (290)
328 1p9a_G Platelet glycoprotein I 99.9 4.7E-25 1.6E-29 231.5 18.4 203 17-267 6-208 (290)
329 4ay9_X Follicle-stimulating ho 99.9 6.6E-25 2.3E-29 237.3 16.4 221 78-310 31-255 (350)
330 3en9_A Glycoprotease, O-sialog 99.9 6.3E-26 2.2E-30 258.2 7.5 178 512-703 336-531 (540)
331 2p1m_B Transport inhibitor res 99.9 4E-28 1.4E-32 282.6 -12.1 372 18-410 102-519 (594)
332 3m19_A Variable lymphocyte rec 99.9 1.2E-23 4.1E-28 216.2 19.6 183 21-221 14-196 (251)
333 2xwt_C Thyrotropin receptor; s 99.9 2.4E-24 8.3E-29 219.7 14.2 196 54-288 32-236 (239)
334 3rfs_A Internalin B, repeat mo 99.9 2.1E-24 7.2E-29 224.7 14.0 227 102-396 19-245 (272)
335 3goz_A Leucine-rich repeat-con 99.9 1.5E-25 5.3E-30 243.5 3.9 227 59-289 4-264 (362)
336 2xwt_C Thyrotropin receptor; s 99.9 3.7E-24 1.3E-28 218.4 13.8 207 64-312 22-237 (239)
337 2p1m_B Transport inhibitor res 99.9 5.7E-27 1.9E-31 272.8 -8.3 402 17-432 62-518 (594)
338 4ay9_X Follicle-stimulating ho 99.9 1.1E-23 3.9E-28 227.6 17.3 204 80-295 12-219 (350)
339 3goz_A Leucine-rich repeat-con 99.9 2.2E-25 7.5E-30 242.4 3.8 265 81-369 2-304 (362)
340 1h6u_A Internalin H; cell adhe 99.9 2.4E-23 8.1E-28 220.7 14.7 195 17-268 37-231 (308)
341 4glp_A Monocyte differentiatio 99.9 1.3E-23 4.3E-28 223.3 11.9 206 125-338 90-307 (310)
342 4glp_A Monocyte differentiatio 99.9 9.5E-24 3.2E-28 224.3 10.6 229 54-315 65-308 (310)
343 1h6u_A Internalin H; cell adhe 99.9 3.9E-24 1.3E-28 226.8 7.0 209 57-315 23-231 (308)
344 2ca6_A RAN GTPase-activating p 99.9 8.2E-25 2.8E-29 240.2 -0.9 276 117-407 23-340 (386)
345 2ca6_A RAN GTPase-activating p 99.9 5.5E-25 1.9E-29 241.6 -2.3 251 42-317 21-319 (386)
346 3m19_A Variable lymphocyte rec 99.9 1.9E-22 6.7E-27 207.2 16.8 127 79-215 16-142 (251)
347 2ast_B S-phase kinase-associat 99.9 5.6E-24 1.9E-28 228.9 1.8 252 104-415 49-311 (336)
348 2ast_B S-phase kinase-associat 99.9 9.6E-24 3.3E-28 227.0 3.1 253 55-347 49-315 (336)
349 2o6s_A Variable lymphocyte rec 99.9 8.7E-22 3E-26 196.2 15.0 152 24-192 10-161 (208)
350 2o6s_A Variable lymphocyte rec 99.9 9.9E-21 3.4E-25 188.5 17.1 182 55-255 9-190 (208)
351 3cvr_A Invasion plasmid antige 99.8 1E-20 3.5E-25 215.1 19.4 188 22-254 60-254 (571)
352 2xot_A Amphoterin-induced prot 99.8 5.2E-21 1.8E-25 207.5 15.9 180 24-217 21-202 (361)
353 1zar_A RIO2 kinase; serine kin 99.8 2.5E-22 8.6E-27 209.4 4.8 149 504-683 82-252 (282)
354 2v9t_B SLIT homolog 2 protein 99.8 2.3E-20 7.9E-25 187.3 16.0 153 24-193 14-166 (220)
355 3cvr_A Invasion plasmid antige 99.8 1.2E-20 4.1E-25 214.6 15.1 204 54-294 60-277 (571)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 2.6E-20 9.1E-25 186.9 15.7 153 24-193 14-167 (220)
357 1h6t_A Internalin B; cell adhe 99.8 1.1E-20 3.7E-25 198.4 12.9 172 17-217 42-213 (291)
358 2xot_A Amphoterin-induced prot 99.8 3.7E-20 1.3E-24 200.9 16.3 179 55-243 20-202 (361)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 3.4E-20 1.2E-24 186.1 14.8 154 2-166 16-169 (220)
360 3e6j_A Variable lymphocyte rec 99.8 1.2E-19 4.2E-24 183.3 17.2 154 23-194 21-174 (229)
361 1m9s_A Internalin B; cell inva 99.8 3.2E-20 1.1E-24 213.5 13.8 183 4-217 28-210 (605)
362 2v9t_B SLIT homolog 2 protein 99.8 1.8E-19 6.1E-24 180.8 16.3 154 55-218 13-166 (220)
363 1h6t_A Internalin B; cell adhe 99.8 3.3E-20 1.1E-24 194.7 10.8 142 57-217 28-169 (291)
364 1m9s_A Internalin B; cell inva 99.8 4.5E-20 1.5E-24 212.3 12.1 190 56-270 24-213 (605)
365 3sb4_A Hypothetical leucine ri 99.8 1.9E-20 6.6E-25 200.4 6.3 263 52-356 48-328 (329)
366 4b8c_D Glucose-repressible alc 99.8 1.8E-20 6.1E-25 221.1 6.2 225 20-291 172-404 (727)
367 1xeu_A Internalin C; cellular 99.8 1.1E-19 3.8E-24 187.6 10.8 163 3-194 25-187 (263)
368 1dce_A Protein (RAB geranylger 99.8 4.1E-21 1.4E-25 219.6 -2.1 166 216-404 397-567 (567)
369 3sb4_A Hypothetical leucine ri 99.8 3.8E-20 1.3E-24 198.1 5.4 288 52-380 24-328 (329)
370 3e6j_A Variable lymphocyte rec 99.8 1.6E-18 5.4E-23 175.1 16.3 155 55-220 21-175 (229)
371 4ezg_A Putative uncharacterize 99.8 7.3E-19 2.5E-23 173.3 12.3 151 52-217 43-194 (197)
372 1dce_A Protein (RAB geranylger 99.8 2.9E-21 1E-25 220.8 -5.8 216 123-380 346-567 (567)
373 1xeu_A Internalin C; cellular 99.8 6.4E-19 2.2E-23 181.9 11.8 172 226-413 17-188 (263)
374 4ezg_A Putative uncharacterize 99.8 8.7E-19 3E-23 172.7 11.4 155 17-193 40-195 (197)
375 4b8c_D Glucose-repressible alc 99.8 7.7E-19 2.6E-23 207.2 9.9 222 53-314 173-404 (727)
376 4fdw_A Leucine rich hypothetic 99.8 1.2E-17 4E-22 182.8 18.0 263 76-384 112-381 (401)
377 4fdw_A Leucine rich hypothetic 99.7 3.6E-17 1.2E-21 178.9 20.9 264 53-338 113-383 (401)
378 1w8a_A SLIT protein; signaling 99.7 8.3E-19 2.8E-23 172.0 6.9 129 257-388 11-141 (192)
379 1w8a_A SLIT protein; signaling 99.7 2E-17 6.9E-22 162.1 13.3 131 56-194 11-141 (192)
380 1zth_A RIO1 serine protein kin 99.7 7.6E-18 2.6E-22 173.3 8.9 133 514-658 49-219 (258)
381 2wfh_A SLIT homolog 2 protein 99.7 5.5E-17 1.9E-21 159.0 13.8 109 78-193 32-140 (193)
382 2ell_A Acidic leucine-rich nuc 99.7 2.7E-17 9.1E-22 157.5 11.2 137 20-166 23-163 (168)
383 2ell_A Acidic leucine-rich nuc 99.7 5E-17 1.7E-21 155.6 10.7 139 51-194 22-162 (168)
384 1a9n_A U2A', U2A'; complex (nu 99.7 1.7E-17 5.7E-22 160.2 7.0 148 1-164 1-154 (176)
385 2o6r_A Variable lymphocyte rec 99.7 2E-16 6.7E-21 152.9 14.1 131 56-195 10-140 (177)
386 2wfh_A SLIT homolog 2 protein 99.7 1.1E-16 3.9E-21 156.7 12.3 129 281-412 13-141 (193)
387 4fs7_A Uncharacterized protein 99.7 6.1E-16 2.1E-20 169.7 18.9 319 64-407 58-376 (394)
388 4fs7_A Uncharacterized protein 99.7 1E-15 3.6E-20 167.9 20.5 327 49-402 67-393 (394)
389 2o6r_A Variable lymphocyte rec 99.7 2.9E-16 1E-20 151.6 11.9 133 280-414 9-141 (177)
390 2je0_A Acidic leucine-rich nuc 99.7 1.6E-16 5.6E-21 148.7 8.7 128 20-158 16-148 (149)
391 2je0_A Acidic leucine-rich nuc 99.7 1.3E-16 4.5E-21 149.3 8.0 132 52-188 16-149 (149)
392 4gyi_A RIO2 kinase; protein ki 99.6 1.3E-16 4.3E-21 170.2 3.1 133 513-657 96-264 (397)
393 1a9n_A U2A', U2A'; complex (nu 99.6 1.3E-15 4.3E-20 147.0 8.8 136 49-191 15-152 (176)
394 1ds9_A Outer arm dynein; leuci 99.6 3.1E-17 1E-21 161.7 -6.3 167 17-193 14-186 (198)
395 4gt6_A Cell surface protein; l 99.5 1.1E-13 3.8E-18 151.7 19.3 327 49-409 59-390 (394)
396 3g39_A Variable lymphocyte rec 99.5 2E-14 6.9E-19 137.5 11.7 105 23-139 11-115 (170)
397 1ds9_A Outer arm dynein; leuci 99.5 9.8E-17 3.4E-21 158.1 -4.8 128 233-364 21-155 (198)
398 3g39_A Variable lymphocyte rec 99.5 3E-14 1E-18 136.4 12.2 107 79-194 11-117 (170)
399 2r9u_A Variable lymphocyte rec 99.5 3.9E-14 1.3E-18 136.0 12.0 104 24-139 15-118 (174)
400 4gt6_A Cell surface protein; l 99.5 2.4E-13 8.3E-18 149.0 19.7 333 10-385 52-390 (394)
401 2r9u_A Variable lymphocyte rec 99.5 5.5E-14 1.9E-18 135.0 12.2 106 80-194 15-120 (174)
402 3un9_A NLR family member X1; l 99.4 8.2E-15 2.8E-19 158.6 -5.5 164 53-218 72-253 (372)
403 4h09_A Hypothetical leucine ri 99.4 3.7E-11 1.3E-15 130.9 22.9 313 48-395 41-354 (379)
404 2ifg_A High affinity nerve gro 99.3 1.7E-12 5.8E-17 139.7 10.1 132 282-415 12-146 (347)
405 2ifg_A High affinity nerve gro 99.3 2.3E-12 7.9E-17 138.6 10.1 94 43-139 22-116 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.3 8.8E-12 3E-16 128.4 11.4 143 508-656 10-212 (263)
407 4h09_A Hypothetical leucine ri 99.3 1.1E-10 3.9E-15 127.0 18.7 303 71-407 40-343 (379)
408 3un9_A NLR family member X1; l 99.2 3.8E-13 1.3E-17 145.5 -3.4 159 253-411 71-253 (372)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 3.1E-10 1.1E-14 116.4 8.1 134 512-657 20-214 (264)
410 3dxp_A Putative acyl-COA dehyd 98.9 1.5E-09 5.1E-14 117.1 8.6 139 516-657 42-248 (359)
411 2ra8_A Uncharacterized protein 98.8 1.1E-09 3.8E-14 117.2 4.4 43 21-63 107-149 (362)
412 2ra8_A Uncharacterized protein 98.7 5E-09 1.7E-13 112.1 2.8 159 223-386 134-320 (362)
413 3r70_A Aminoglycoside phosphot 98.6 7E-08 2.4E-12 102.1 8.8 136 513-657 38-237 (320)
414 3sg8_A APH(2'')-ID; antibiotic 98.5 7.7E-08 2.6E-12 101.0 7.4 136 517-657 25-223 (304)
415 3rw6_A Nuclear RNA export fact 98.5 2.2E-08 7.6E-13 101.6 1.2 63 100-164 168-234 (267)
416 1io0_A Tropomodulin; LRR prote 98.5 2.2E-08 7.4E-13 96.7 0.2 116 48-164 31-165 (185)
417 3rw6_A Nuclear RNA export fact 98.5 2.9E-08 9.9E-13 100.7 1.0 99 93-196 132-237 (267)
418 1io0_A Tropomodulin; LRR prote 98.4 2.5E-08 8.5E-13 96.3 0.2 123 68-192 27-164 (185)
419 3tdw_A Gentamicin resistance p 98.3 8.8E-07 3E-11 92.8 9.4 136 517-657 24-224 (306)
420 4gkh_A Aminoglycoside 3'-phosp 98.3 3.3E-06 1.1E-10 86.7 11.7 131 519-657 31-223 (272)
421 3ovc_A Hygromycin-B 4-O-kinase 98.1 6.5E-06 2.2E-10 88.3 8.9 72 515-591 44-121 (362)
422 3d1u_A Putative fructosamine-3 98.1 9E-06 3.1E-10 84.1 9.3 73 515-591 18-97 (288)
423 3ats_A Putative uncharacterize 98.0 8.3E-06 2.8E-10 87.4 7.6 76 517-592 25-121 (357)
424 3e4g_A ATP synthase subunit S, 97.8 6.3E-06 2.1E-10 77.4 2.6 83 103-190 62-150 (176)
425 2q83_A YTAA protein; 2635576, 97.7 7.5E-05 2.6E-09 79.3 9.4 136 518-657 38-252 (346)
426 2olc_A MTR kinase, methylthior 97.7 0.0001 3.6E-09 80.1 9.8 71 517-589 35-120 (397)
427 3e4g_A ATP synthase subunit S, 97.6 2.2E-05 7.5E-10 73.7 3.5 83 301-383 61-149 (176)
428 3jr1_A Putative fructosamine-3 97.5 0.00024 8.1E-09 74.1 9.8 134 516-653 40-232 (312)
429 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00013 4.4E-09 69.8 2.0 119 73-192 37-170 (197)
430 3rfe_A Platelet glycoprotein I 97.1 0.00069 2.4E-08 60.5 5.9 37 127-163 32-68 (130)
431 3rfe_A Platelet glycoprotein I 97.0 0.001 3.5E-08 59.4 6.5 56 57-115 12-68 (130)
432 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00018 6.1E-09 68.8 1.2 112 50-162 38-169 (197)
433 3dxq_A Choline/ethanolamine ki 96.9 0.0026 8.8E-08 66.0 9.4 128 516-657 22-202 (301)
434 2ppq_A HSK, HK, homoserine kin 96.8 0.0034 1.2E-07 65.8 10.1 155 501-657 6-217 (322)
435 3csv_A Aminoglycoside phosphot 96.8 0.0028 9.7E-08 66.7 9.4 135 518-657 24-217 (333)
436 2pyw_A Uncharacterized protein 96.8 0.0021 7.3E-08 70.2 8.6 31 626-657 231-261 (420)
437 3f7w_A Putative fructosamine-3 96.6 0.0061 2.1E-07 62.7 10.0 74 513-590 16-96 (288)
438 1zyl_A Hypothetical protein YI 96.4 0.023 7.9E-07 59.4 12.9 154 500-657 9-223 (328)
439 1nw1_A Choline kinase (49.2 KD 95.9 0.0048 1.6E-07 67.4 4.5 67 518-590 79-158 (429)
440 2qg7_A Ethanolamine kinase PV0 95.8 0.014 4.8E-07 64.1 7.6 69 517-590 113-187 (458)
441 3feg_A Choline/ethanolamine ki 95.6 0.027 9.3E-07 60.1 8.9 135 518-657 56-254 (379)
442 3c5i_A Choline kinase; choline 95.3 0.015 5.1E-07 62.2 5.7 68 518-590 39-120 (369)
443 3i1a_A Spectinomycin phosphotr 95.1 0.079 2.7E-06 55.7 10.2 32 626-657 205-236 (339)
444 2yle_A Protein spire homolog 1 94.8 0.095 3.3E-06 50.3 8.7 138 590-746 34-196 (229)
445 3f2s_A CK, chetk-alpha, cholin 92.8 0.15 5E-06 54.6 6.8 32 626-657 243-280 (401)
446 3mes_A Choline kinase; malaria 90.7 0.6 2E-05 50.4 8.8 31 626-657 261-291 (424)
447 2ks1_B Epidermal growth factor 82.1 0.43 1.5E-05 32.7 1.0 17 469-485 24-40 (44)
448 2l2t_A Receptor tyrosine-prote 81.2 0.32 1.1E-05 33.3 0.1 19 468-486 22-40 (44)
449 4ano_A ESSB; membrane protein, 79.9 3.9 0.00013 39.2 7.3 84 562-656 48-132 (219)
450 3g15_A CK, chetk-alpha, cholin 78.2 0.51 1.7E-05 50.7 0.6 30 628-657 245-280 (401)
451 4ann_A ESSB; membrane protein, 73.9 2.9 0.0001 39.9 4.5 86 562-658 43-129 (215)
452 2lz0_A Uncharacterized protein 71.4 3.6 0.00012 34.1 4.0 47 113-160 7-53 (100)
453 3cxl_A N-chimerin; SH2, RHO-GA 67.8 0.78 2.7E-05 50.2 -1.2 56 516-574 146-214 (463)
454 2lz0_A Uncharacterized protein 67.0 9 0.00031 31.6 5.5 45 65-111 8-52 (100)
455 2k1k_A Ephrin type-A receptor 59.1 1.5 5E-05 29.0 -0.6 26 457-482 12-37 (38)
456 2jwa_A Receptor tyrosine-prote 55.6 1.9 6.4E-05 29.4 -0.6 6 459-464 15-20 (44)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4e-56 Score=532.57 Aligned_cols=436 Identities=34% Similarity=0.514 Sum_probs=368.0
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCcc--------------ccCCCccccCC-CCCCEEEcccCccc
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFI--------------LCEIPHEIDNL-HNMEWMAFSFNKVV 66 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~--------------l~~ip~~~~~l-~~L~~L~ls~N~i~ 66 (797)
++|++|.++|.+|..|+.+++|++|||++|++++.+|..- ...+|..+..+ ++|++|++++|+++
T Consensus 228 L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~ 307 (768)
T 3rgz_A 228 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFY 307 (768)
T ss_dssp EECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEE
T ss_pred EECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCC
Confidence 4556666666666666666666666666666665555421 12567776664 88888888888888
Q ss_pred ccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCC-CCCEEEccCCcCcccCCcc
Q 040702 67 GVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNAS-KLSELGLQKNSFSGSIPNT 145 (797)
Q Consensus 67 ~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~ 145 (797)
+..|..|+++++|++|+|++|.+++.+|...+..+++|++|+|++|++++.+|..+.+++ +|++|+|++|++++..|..
T Consensus 308 ~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~ 387 (768)
T 3rgz_A 308 GAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387 (768)
T ss_dssp ECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTT
T ss_pred CccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChh
Confidence 888888888888888888888887778877677888888888888888877888887776 7888888888887777776
Q ss_pred ccC--CCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChh
Q 040702 146 FGN--LRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEE 223 (797)
Q Consensus 146 f~~--l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~ 223 (797)
+.. +++|++|+|++|.++...+. .+.++++|++|++++|++++..|..|..++ +|+.|++++|.+.+.+|..
T Consensus 388 ~~~~~~~~L~~L~L~~n~l~~~~p~-----~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~ 461 (768)
T 3rgz_A 388 LCQNPKNTLQELYLQNNGFTGKIPP-----TLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLEGEIPQE 461 (768)
T ss_dssp TTCSTTCCCCEEECCSSEEEEECCG-----GGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCCEEECCSSCCCSCCCGG
T ss_pred hhhcccCCccEEECCCCccccccCH-----HHhcCCCCCEEECcCCcccCcccHHHhcCC-CCCEEECCCCcccCcCCHH
Confidence 666 77888888888888755443 377888899999999999988899999887 8999999999999999999
Q ss_pred hhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCC-CCCCCCCCCCc
Q 040702 224 INNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLT-SIPSTLWNLKD 302 (797)
Q Consensus 224 ~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~ 302 (797)
+..+++| ++|++++|++++..|..+..+++|++|+|++|++++..|..++.+++|++|+|++|.++ .+|..+..+++
T Consensus 462 ~~~l~~L--~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 539 (768)
T 3rgz_A 462 LMYVKTL--ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539 (768)
T ss_dssp GGGCTTC--CEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTT
T ss_pred HcCCCCc--eEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCC
Confidence 9999888 99999999999889999999999999999999999888999999999999999999994 78888888999
Q ss_pred ccEEEccCCcCCCCCCcc--------------------------------------------------------------
Q 040702 303 ILHLNLSSNFFTGPLPLK-------------------------------------------------------------- 320 (797)
Q Consensus 303 L~~L~l~~N~l~~~~~~~-------------------------------------------------------------- 320 (797)
|+.|++++|.+++.+|..
T Consensus 540 L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 619 (768)
T 3rgz_A 540 LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 619 (768)
T ss_dssp CCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCE
T ss_pred CCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccce
Confidence 999999999888666643
Q ss_pred --------ccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChh
Q 040702 321 --------IGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPIS 392 (797)
Q Consensus 321 --------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 392 (797)
++.+++|+.|||++|++++.+|..|+.+++|+.|+|++|++++.+|..++.+++|++|||++|+++|.+|..
T Consensus 620 ~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~ 699 (768)
T 3rgz_A 620 YGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA 699 (768)
T ss_dssp EEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGG
T ss_pred ecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChH
Confidence 334578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCeEEccCCcCcccCCCCCCCCCCCcccccCCccccCCCCcccccccccc
Q 040702 393 LEKLLDLKDINVSFNRLEGEIPREGPFRNLSAESFKGNELLCGMPNLQVLSCRTKI 448 (797)
Q Consensus 393 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~~~~~~~~~~~~~ 448 (797)
+.++++|+.|++++|+++|.+|..+.+.++....+.||+.+||.|.. .|....
T Consensus 700 l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~---~C~~~~ 752 (768)
T 3rgz_A 700 MSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP---RCDPSN 752 (768)
T ss_dssp GGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC---CCCSCC
T ss_pred HhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc---CCCCCc
Confidence 99999999999999999999999999999999999999999998842 686543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.5e-52 Score=495.12 Aligned_cols=422 Identities=33% Similarity=0.487 Sum_probs=339.8
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+||++|.+++.+|. |+.+++|++|||++|++++. +|..+..+++|++|++++|++.+..|.. .+++|++
T Consensus 205 L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~--------~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~ 273 (768)
T 3rgz_A 205 LDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGD--------FSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQY 273 (768)
T ss_dssp EECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSC--------HHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCE
T ss_pred EECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCc--------ccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCE
Confidence 45666666666665 66666777777776665443 3455667777777777777777666554 6677777
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCc-cccCCCCCCeeeccCc
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPN-TFGNLRNLKWLGLNDN 160 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~f~~l~~L~~L~L~~N 160 (797)
|+|++|++++.+|..++..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|. .|.++++|++|+|++|
T Consensus 274 L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n 353 (768)
T 3rgz_A 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 353 (768)
T ss_dssp EECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSS
T ss_pred EECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCC
Confidence 777777777677776665557788888888877777777777777788888888777755554 3777777777777777
Q ss_pred cCc-CCCCCccccc-------------------cCCC--CCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccc
Q 040702 161 YLT-SSTPELSSLS-------------------SLSN--CKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISG 218 (797)
Q Consensus 161 ~l~-~~~~~~~~~~-------------------~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~ 218 (797)
.++ .++..+..+. .+.. +++|++|++++|++.+..|..+.+++ +|+.|++++|.+++
T Consensus 354 ~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~ 432 (768)
T 3rgz_A 354 EFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS-ELVSLHLSFNYLSG 432 (768)
T ss_dssp EEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCT-TCCEEECCSSEEES
T ss_pred ccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCC-CCCEEECcCCcccC
Confidence 776 3343332211 1222 67788889999988888888998887 89999999999999
Q ss_pred cCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCC-CCCCCC
Q 040702 219 SIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLT-SIPSTL 297 (797)
Q Consensus 219 ~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~~ 297 (797)
.+|..++.+++| ++|++++|.+.+..|..+..+++|++|++++|++++..|..+.++++|++|+|++|+++ .+|.++
T Consensus 433 ~~p~~l~~l~~L--~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 510 (768)
T 3rgz_A 433 TIPSSLGSLSKL--RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510 (768)
T ss_dssp CCCGGGGGCTTC--CEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGG
T ss_pred cccHHHhcCCCC--CEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHH
Confidence 999999999988 99999999999999999999999999999999999889999999999999999999995 778888
Q ss_pred CCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccccCcc---------------------------------
Q 040702 298 WNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTK--------------------------------- 344 (797)
Q Consensus 298 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~--------------------------------- 344 (797)
..+++|+.|++++|++++..|..++.+++|+.|++++|++++.+|..
T Consensus 511 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (768)
T 3rgz_A 511 GRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGA 590 (768)
T ss_dssp GGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSS
T ss_pred hcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccc
Confidence 89999999999999999999999999999999999999988766643
Q ss_pred -------------------------------------ccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCC
Q 040702 345 -------------------------------------IGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSG 387 (797)
Q Consensus 345 -------------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 387 (797)
|..+++|+.|+|++|++++.+|..++.+++|+.|+|++|+++|
T Consensus 591 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g 670 (768)
T 3rgz_A 591 GNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 670 (768)
T ss_dssp EEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred ccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCC
Confidence 3345778999999999999999999999999999999999999
Q ss_pred CCChhhhccCCCCeEEccCCcCcccCCCC-CCCCCCCcccccCCccccCCC
Q 040702 388 TIPISLEKLLDLKDINVSFNRLEGEIPRE-GPFRNLSAESFKGNELLCGMP 437 (797)
Q Consensus 388 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~l~~~~~~~n~~~c~~~ 437 (797)
.+|..+.++++|+.|||++|+++|.+|.. ..++.++.+++++|++.-..|
T Consensus 671 ~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred CCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 99999999999999999999999999875 667889999999998765455
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.9e-50 Score=472.18 Aligned_cols=418 Identities=20% Similarity=0.191 Sum_probs=261.8
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+||++|.|+++.+.+|+.+++|++|||++|++++..|. .|.++++|++|++++|+++++.|.+|.++++|++
T Consensus 38 L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~--------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 109 (606)
T 3t6q_A 38 LEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHED--------TFQSQHRLDTLVLTANPLIFMAETALSGPKALKH 109 (606)
T ss_dssp EECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTT--------TTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCE
T ss_pred EEccCCccCcCChhHhccCccceEEECCCCccceeChh--------hccCccccCeeeCCCCcccccChhhhcccccccE
Confidence 57889999988888899999999999999987655443 3444455555555555555444444555555555
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCC------------
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNL------------ 149 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l------------ 149 (797)
|+|++|+++ .++...+..+++|++|+|++|++++..+..+..+++|++|+|++|+|+++.+..|.++
T Consensus 110 L~L~~n~i~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~ 188 (606)
T 3t6q_A 110 LFFIQTGIS-SIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNG 188 (606)
T ss_dssp EECTTSCCS-CGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTT
T ss_pred eeccccCcc-cCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCC
Confidence 555555444 3322333444444444444444443322223334444444444444444444444444
Q ss_pred --------------------------------------------------------------------------------
Q 040702 150 -------------------------------------------------------------------------------- 149 (797)
Q Consensus 150 -------------------------------------------------------------------------------- 149 (797)
T Consensus 189 n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~ 268 (606)
T 3t6q_A 189 NDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFN 268 (606)
T ss_dssp CCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSS
T ss_pred CccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCc
Confidence
Q ss_pred ---------CCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccC
Q 040702 150 ---------RNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSI 220 (797)
Q Consensus 150 ---------~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~ 220 (797)
++|++|+|++|.++.+|.. +..+++|++|++++|++.+..|..+..++ +|+.|++++|.+.+.+
T Consensus 269 ~~~~~~~~l~~L~~L~l~~n~l~~lp~~------l~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~~~~~~ 341 (606)
T 3t6q_A 269 ISSNTFHCFSGLQELDLTATHLSELPSG------LVGLSTLKKLVLSANKFENLCQISASNFP-SLTHLSIKGNTKRLEL 341 (606)
T ss_dssp CCTTTTTTCTTCSEEECTTSCCSCCCSS------CCSCTTCCEEECTTCCCSBGGGGCGGGCT-TCSEEECCSCSSCCBC
T ss_pred cCHHHhccccCCCEEeccCCccCCCChh------hcccccCCEEECccCCcCcCchhhhhccC-cCCEEECCCCCccccc
Confidence 4444444444444443332 34444555555555555544444555554 4555555555555333
Q ss_pred Ch-hhhhhhhhHhhhcccccccccCCC--chhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCC-CC-
Q 040702 221 PE-EINNLTNLILQLLSLEGNQLEGSI--PDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSI-PS- 295 (797)
Q Consensus 221 p~-~~~~l~~L~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~- 295 (797)
|. .+..+++| ++|++++|.+.+.. +..+..+++|++|++++|++.+..|..|..+++|+.|++++|.++.. |.
T Consensus 342 ~~~~~~~l~~L--~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 419 (606)
T 3t6q_A 342 GTGCLENLENL--RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQS 419 (606)
T ss_dssp CSSTTTTCTTC--CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCC
T ss_pred chhhhhccCcC--CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccch
Confidence 32 35555555 66666666665544 55566666777777777777666666777777777777777777443 32
Q ss_pred CCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccc---cCccccCCcccceecccCccccCCCChhhhcc
Q 040702 296 TLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCV---IPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDL 372 (797)
Q Consensus 296 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 372 (797)
.+..+++|+.|++++|.+.+..|..|..+++|++|++++|.+++. .+..+..+++|++|++++|++++..|..|..+
T Consensus 420 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 499 (606)
T 3t6q_A 420 PFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSL 499 (606)
T ss_dssp TTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred hhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccc
Confidence 366677777777777777777777777777788888888777652 23557777788888888888877777778888
Q ss_pred ccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCcccCCCC-CCCCCCCcccccCCccccCCCC
Q 040702 373 ISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGEIPRE-GPFRNLSAESFKGNELLCGMPN 438 (797)
Q Consensus 373 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~l~~~~~~~n~~~c~~~~ 438 (797)
++|++|+|++|++++..|..+..+++| .|++++|++++.+|.. ..+..++.+++.+|++.|+|+.
T Consensus 500 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 500 KMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp TTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred cCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 888888888888887778888888888 8888888888776653 4466778888889998888764
No 4
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7.2e-50 Score=483.35 Aligned_cols=423 Identities=22% Similarity=0.208 Sum_probs=329.9
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+||++|.|+++.+..|..+++|++|||++|...+.++ |..+.++++|++|+|++|++.++.|.+|.++++|++
T Consensus 29 LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~-------~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 29 LLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTID-------KEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp EEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEEC-------TTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred EECCCCcCCccChhHCcccccCeEEeCCCCCCccccC-------HHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 6899999999999999999999999999997433322 677899999999999999999999999999999999
Q ss_pred EEccCCcCcccCCC-ccccCCCCccEEEccCccccccCC-chhhCCCCCCEEEccCCcCcccCCccccCC--CCCCeeec
Q 040702 82 LYLHSNSLSGRLPS-SADVRLPNLKELHLWGNNFIGTIP-SFIFNASKLSELGLQKNSFSGSIPNTFGNL--RNLKWLGL 157 (797)
Q Consensus 82 L~Ls~N~l~~~l~~-~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l--~~L~~L~L 157 (797)
|+|++|.+++.+|. ..|..+++|++|+|++|.+++..+ ..|.++++|++|+|++|+|+++.+..|..+ ++|++|+|
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L 181 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSL 181 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEE
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEEC
Confidence 99999999865554 467899999999999999987765 579999999999999999999888888877 67777777
Q ss_pred cCccCcCCCCC-cccc------------------------------------------------------------ccCC
Q 040702 158 NDNYLTSSTPE-LSSL------------------------------------------------------------SSLS 176 (797)
Q Consensus 158 ~~N~l~~~~~~-~~~~------------------------------------------------------------~~l~ 176 (797)
++|.++...+. +..+ ..|.
T Consensus 182 ~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~ 261 (844)
T 3j0a_A 182 AANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFA 261 (844)
T ss_dssp CCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTT
T ss_pred CCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhh
Confidence 77766543221 0000 0011
Q ss_pred C--CCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCC
Q 040702 177 N--CKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLA 254 (797)
Q Consensus 177 ~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~ 254 (797)
+ .++|+.|++++|.+.+..+..|..++ +|+.|++++|.+.+..|..|.++++| ++|+|++|.+++..+..|..++
T Consensus 262 ~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L--~~L~Ls~N~l~~~~~~~~~~l~ 338 (844)
T 3j0a_A 262 GLARSSVRHLDLSHGFVFSLNSRVFETLK-DLKVLNLAYNKINKIADEAFYGLDNL--QVLNLSYNLLGELYSSNFYGLP 338 (844)
T ss_dssp TTTTSCCCEEECTTCCCCEECSCCSSSCC-CCCEEEEESCCCCEECTTTTTTCSSC--CEEEEESCCCSCCCSCSCSSCT
T ss_pred ccccCCccEEECCCCcccccChhhhhcCC-CCCEEECCCCcCCCCChHHhcCCCCC--CEEECCCCCCCccCHHHhcCCC
Confidence 1 25677777777777777777777776 78888888888877777777777777 7888888888777777788888
Q ss_pred CCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCC-------------------C-------------------
Q 040702 255 ALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPS-------------------T------------------- 296 (797)
Q Consensus 255 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-------------------~------------------- 296 (797)
+|+.|++++|+++.+.+..|.++++|+.|+|++|.++.++. .
T Consensus 339 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~ 418 (844)
T 3j0a_A 339 KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDI 418 (844)
T ss_dssp TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTT
T ss_pred CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCch
Confidence 88888888888877777777777788877777777765432 0
Q ss_pred ---CCCCCcccEEEccCCcCCCCCCc-cccccccccEEeccCcccc-----cccCccccCCcccceecccCccccCCCCh
Q 040702 297 ---LWNLKDILHLNLSSNFFTGPLPL-KIGNLNVLVQLDLSMNNFS-----CVIPTKIGGLKDLQYLFLEYNRLQGSIPN 367 (797)
Q Consensus 297 ---~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 367 (797)
+..+++|+.|++++|++++..+. .+..+++|+.|++++|.++ +..+..|.++++|+.|+|++|++++..|.
T Consensus 419 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 498 (844)
T 3j0a_A 419 LYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPG 498 (844)
T ss_dssp HHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTT
T ss_pred hhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChh
Confidence 11345555555555555543322 2344566666666666665 33445688889999999999999988888
Q ss_pred hhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCcccCCCCCCCCCCCcccccCCccccCCCC
Q 040702 368 SIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGEIPREGPFRNLSAESFKGNELLCGMPN 438 (797)
Q Consensus 368 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~~~ 438 (797)
.|..+++|+.|+|++|+|++..|..+. ++|+.|++++|++++.+|.. +..+..+++.+||+.|+|+.
T Consensus 499 ~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 499 VFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSC
T ss_pred HccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCccccccc
Confidence 899999999999999999987777766 88999999999999888854 56889999999999999874
No 5
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.4e-49 Score=461.63 Aligned_cols=421 Identities=21% Similarity=0.181 Sum_probs=348.0
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+||++|.++++.+..|..+++|++|||++|++++.. |..|.++++|++|+|++|+++++.|.+|.++++|++
T Consensus 37 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~--------~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 108 (606)
T 3vq2_A 37 IDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIE--------DKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLEN 108 (606)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEEC--------TTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCE
T ss_pred EECCCCCcCEeChhhccCCccCcEEeCCCCcccccC--------HHHhhchhhcCEeECCCCcccccChhhcCCcccCCE
Confidence 689999999999999999999999999999965443 456788999999999999999988999999999999
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCccccc-cCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCC----eee
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIG-TIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLK----WLG 156 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~----~L~ 156 (797)
|+|++|.++ .++...+.++++|++|+|++|.+++ .+|..|.++++|++|+|++|+++++.+..|..+++|+ +|+
T Consensus 109 L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~ 187 (606)
T 3vq2_A 109 LVAVETKLA-SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLD 187 (606)
T ss_dssp EECTTSCCC-CSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEE
T ss_pred EEccCCccc-cccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceee
Confidence 999999998 6776667899999999999999986 4689999999999999999999988888888777665 677
Q ss_pred ccCccCcCCCCCccc-----------------------------------------------------------------
Q 040702 157 LNDNYLTSSTPELSS----------------------------------------------------------------- 171 (797)
Q Consensus 157 L~~N~l~~~~~~~~~----------------------------------------------------------------- 171 (797)
+++|.++.+++....
T Consensus 188 l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~ 267 (606)
T 3vq2_A 188 MSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFR 267 (606)
T ss_dssp CTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEE
T ss_pred ccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhhee
Confidence 777777665543211
Q ss_pred --------------------------------cccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCccccc
Q 040702 172 --------------------------------LSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGS 219 (797)
Q Consensus 172 --------------------------------~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~ 219 (797)
++.+..+++|+.|++++|++. .+| .+ .++ +|+.|++++|...+.
T Consensus 268 l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~-~lp-~~-~l~-~L~~L~l~~n~~~~~ 343 (606)
T 3vq2_A 268 LTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLK-QFP-TL-DLP-FLKSLTLTMNKGSIS 343 (606)
T ss_dssp ECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCS-SCC-CC-CCS-SCCEEEEESCSSCEE
T ss_pred ccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCc-ccc-cC-CCC-ccceeeccCCcCccc
Confidence 001233344555555555552 333 22 443 555555555543332
Q ss_pred CChhhhhhhhhHhhhcccccccccCC--CchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCC--
Q 040702 220 IPEEINNLTNLILQLLSLEGNQLEGS--IPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPS-- 295 (797)
Q Consensus 220 ~p~~~~~l~~L~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-- 295 (797)
. .+..+++| ++|++++|.+++. .+..+..+++|++|++++|.+++. |..+..+++|+.|++++|.+..++.
T Consensus 344 ~--~~~~l~~L--~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~ 418 (606)
T 3vq2_A 344 F--KKVALPSL--SYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIM-SANFMGLEELQHLDFQHSTLKRVTEFS 418 (606)
T ss_dssp C--CCCCCTTC--CEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEE-CCCCTTCTTCCEEECTTSEEESTTTTT
T ss_pred h--hhccCCCC--CEEECcCCccCCCcchhhhhccCCcccEeECCCCccccc-hhhccCCCCCCeeECCCCccCCccChh
Confidence 2 45566777 8899999998866 378899999999999999999864 5889999999999999999976643
Q ss_pred CCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCccccc-ccCccccCCcccceecccCccccCCCChhhhcccc
Q 040702 296 TLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSC-VIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLIS 374 (797)
Q Consensus 296 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 374 (797)
.+..+++|+.|++++|.+.+..|..|..+++|++|++++|.+++ ..|..|..+++|+.|+|++|++++..|..|..+++
T Consensus 419 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 498 (606)
T 3vq2_A 419 AFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHR 498 (606)
T ss_dssp TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhccccc
Confidence 77889999999999999999899999999999999999999997 47899999999999999999999999999999999
Q ss_pred CCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCcccCCCCCCCC-CCCcccccCCccccCCCCcc
Q 040702 375 LKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGEIPREGPFR-NLSAESFKGNELLCGMPNLQ 440 (797)
Q Consensus 375 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~l~~~~~~~n~~~c~~~~~~ 440 (797)
|++|+|++|++++..|..+..+++|+.|++++|+++..++....+. .++.+++.+|++.|+|+..+
T Consensus 499 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 499 LQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQK 565 (606)
T ss_dssp CCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTHH
T ss_pred CCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccHH
Confidence 9999999999999999999999999999999999997665555554 58999999999999998543
No 6
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2e-48 Score=461.44 Aligned_cols=433 Identities=24% Similarity=0.288 Sum_probs=292.6
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCcc---------------ccCCCc-cccCCCCCCEEEcccCcc
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFI---------------LCEIPH-EIDNLHNMEWMAFSFNKV 65 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~---------------l~~ip~-~~~~l~~L~~L~ls~N~i 65 (797)
+||++|.++++.+..|+.+++|++|||++|++++..|..+ ++.+|. .++++++|++|++++|++
T Consensus 30 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l 109 (680)
T 1ziw_A 30 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSI 109 (680)
T ss_dssp EECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCC
T ss_pred EECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCcc
Confidence 3556666666555556666666666666666555554432 334444 356666666666666666
Q ss_pred cccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCcccc--------------------------ccCC
Q 040702 66 VGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFI--------------------------GTIP 119 (797)
Q Consensus 66 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~--------------------------~~~~ 119 (797)
+++.|..|.++++|++|+|++|.++ .++...+.++++|++|+|++|+++ +..|
T Consensus 110 ~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 188 (680)
T 1ziw_A 110 QKIKNNPFVKQKNLITLDLSHNGLS-STKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 188 (680)
T ss_dssp CCCCSCTTTTCTTCCEEECCSSCCS-CCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCT
T ss_pred CccChhHccccCCCCEEECCCCccc-ccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccCh
Confidence 6655556666666666666666665 222233334444444444444433 2222
Q ss_pred c---------------------------------------------------hhhCCC--CCCEEEccCCcCcccCCccc
Q 040702 120 S---------------------------------------------------FIFNAS--KLSELGLQKNSFSGSIPNTF 146 (797)
Q Consensus 120 ~---------------------------------------------------~~~~l~--~L~~L~L~~N~l~~~~~~~f 146 (797)
. .|.+++ +|++|+|++|+++++.|.+|
T Consensus 189 ~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~ 268 (680)
T 1ziw_A 189 GCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSF 268 (680)
T ss_dssp TGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTT
T ss_pred hhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccc
Confidence 2 222222 26666666666666666666
Q ss_pred cCCCCCCeeeccCccCcCCCCC-cccc----------------------c-----cCCCCCCCcEEEccCCCCCCCCChh
Q 040702 147 GNLRNLKWLGLNDNYLTSSTPE-LSSL----------------------S-----SLSNCKYLEYFSFSNNPLGGILPRA 198 (797)
Q Consensus 147 ~~l~~L~~L~L~~N~l~~~~~~-~~~~----------------------~-----~l~~l~~L~~L~Ls~N~l~~~~~~~ 198 (797)
.++++|++|+|++|.++..++. +..+ + .|..+++|++|++++|++.++.+..
T Consensus 269 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 348 (680)
T 1ziw_A 269 AWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNM 348 (680)
T ss_dssp TTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTT
T ss_pred cCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhH
Confidence 6677777777777766654432 1110 0 3556677777777777777777666
Q ss_pred hhccccCCcEEEcc----------------------------CCcccccCChhhhhhhhhHhhhcccccccccCCCc-hh
Q 040702 199 IGNLSQSMEDFWMD----------------------------NCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIP-DD 249 (797)
Q Consensus 199 ~~~l~~~L~~L~L~----------------------------~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~-~~ 249 (797)
|.+++ +|+.|+++ +|++++..|..|..+++| ++|++++|.+.+.++ ..
T Consensus 349 ~~~l~-~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~N~l~~~~~~~~ 425 (680)
T 1ziw_A 349 FTGLI-NLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHL--EVLDLGLNEIGQELTGQE 425 (680)
T ss_dssp TTTCT-TCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTC--CEEECCSSCCEEECCSGG
T ss_pred hcccc-CCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCC--CEEeCCCCcCccccCccc
Confidence 66654 45444444 444445555556666665 666666666654333 55
Q ss_pred hcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCC---CCCCCCCCCCcccEEEccCCcCCCCCCcccccccc
Q 040702 250 LCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLT---SIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNV 326 (797)
Q Consensus 250 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~---~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 326 (797)
|.++++|++|++++|++.+..+..|..+++|+.|++++|.++ .+|..+..+++|+.|++++|.+++..+..|.++++
T Consensus 426 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~ 505 (680)
T 1ziw_A 426 WRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEK 505 (680)
T ss_dssp GTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred ccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccc
Confidence 666666666666666666666666667777777777777663 45777888999999999999999888888999999
Q ss_pred ccEEeccCcccccccC--------ccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCC
Q 040702 327 LVQLDLSMNNFSCVIP--------TKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLD 398 (797)
Q Consensus 327 L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 398 (797)
|++|++++|++++..+ ..|.++++|+.|+|++|+++...+..|..+++|+.|+|++|++++..+..|..+++
T Consensus 506 L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~ 585 (680)
T 1ziw_A 506 LEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVS 585 (680)
T ss_dssp CCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred cCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCC
Confidence 9999999999986533 23788999999999999999666667999999999999999999888888899999
Q ss_pred CCeEEccCCcCcccCCCC-C-CCCCCCcccccCCccccCCCC
Q 040702 399 LKDINVSFNRLEGEIPRE-G-PFRNLSAESFKGNELLCGMPN 438 (797)
Q Consensus 399 L~~L~l~~N~l~~~~p~~-~-~~~~l~~~~~~~n~~~c~~~~ 438 (797)
|+.|++++|++++.+|.. . .+..+..+++.+|||.|+|+.
T Consensus 586 L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 586 LKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 999999999999877653 2 467899999999999999985
No 7
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.6e-49 Score=459.54 Aligned_cols=418 Identities=18% Similarity=0.268 Sum_probs=259.1
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCC------CC------cCCCc-------------cccCCCcccc------
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPP------SG------SIPSF-------------ILCEIPHEID------ 50 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~------~~------~~p~~-------------~l~~ip~~~~------ 50 (797)
+||++|.++|.+|++|+.+++|++|||++|.+ .| .+|.. +...+|..+.
T Consensus 86 L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l 165 (636)
T 4eco_A 86 LSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDC 165 (636)
T ss_dssp EECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHH
T ss_pred EEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHH
Confidence 68999999999999999999999999999975 11 01100 0001111111
Q ss_pred -------------CCCCCCEEEc--ccCcccccCCccccCCCCCCEEEccCCcCccc-----------------CCCccc
Q 040702 51 -------------NLHNMEWMAF--SFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGR-----------------LPSSAD 98 (797)
Q Consensus 51 -------------~l~~L~~L~l--s~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------l~~~~~ 98 (797)
....++.+.+ ..|++++ +|..|+++++|++|+|++|++++. +|..+.
T Consensus 166 ~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~ 244 (636)
T 4eco_A 166 INSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLK 244 (636)
T ss_dssp HHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCC
T ss_pred hhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhh
Confidence 0011111111 2456666 566666666777777777766643 555542
Q ss_pred -cCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCc-Ccc-cCCccccCC------CCCCeeeccCccCcCCCCCc
Q 040702 99 -VRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNS-FSG-SIPNTFGNL------RNLKWLGLNDNYLTSSTPEL 169 (797)
Q Consensus 99 -~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~f~~l------~~L~~L~L~~N~l~~~~~~~ 169 (797)
.++++|++|+|++|++.+.+|..|.++++|++|+|++|+ +++ ..|..++++ ++|++|+|++|+++.+|..
T Consensus 245 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~- 323 (636)
T 4eco_A 245 WDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVE- 323 (636)
T ss_dssp GGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCH-
T ss_pred hcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCch-
Confidence 256667777777766666666666666677777777766 665 556666555 6677777777766655540
Q ss_pred cccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhh-hHhhhcccccccccCCCch
Q 040702 170 SSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTN-LILQLLSLEGNQLEGSIPD 248 (797)
Q Consensus 170 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~-L~L~~L~Ls~N~l~~~~~~ 248 (797)
..+.++++|+.|++++|++.+.+| .|..++ +|+.|++++|.++ .+|..+..+++ | ++|++++|.++ .+|.
T Consensus 324 ---~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~-~L~~L~L~~N~l~-~lp~~l~~l~~~L--~~L~Ls~N~l~-~lp~ 394 (636)
T 4eco_A 324 ---TSLQKMKKLGMLECLYNQLEGKLP-AFGSEI-KLASLNLAYNQIT-EIPANFCGFTEQV--ENLSFAHNKLK-YIPN 394 (636)
T ss_dssp ---HHHTTCTTCCEEECCSCCCEEECC-CCEEEE-EESEEECCSSEEE-ECCTTSEEECTTC--CEEECCSSCCS-SCCS
T ss_pred ---hhhccCCCCCEEeCcCCcCccchh-hhCCCC-CCCEEECCCCccc-cccHhhhhhcccC--cEEEccCCcCc-ccch
Confidence 015556666667777776665555 666665 6666777776666 56666666666 6 66677777666 4555
Q ss_pred hhcCCC--CCcEEEccCCcCcccCCCCcc-------CCccccccccCCCCCCCCCCCCC-CCCcccEEEccCCcCCCCCC
Q 040702 249 DLCRLA--ALFQLDLGGNKLSGFVPACSG-------NLTNLRKLYLGSNLLTSIPSTLW-NLKDILHLNLSSNFFTGPLP 318 (797)
Q Consensus 249 ~~~~l~--~L~~L~Ls~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~lp~~~~-~l~~L~~L~l~~N~l~~~~~ 318 (797)
.+..+. +|++|++++|++++..|..+. .+++|++|+|++|.++.+|..++ .+++|+.|++++|.++...+
T Consensus 395 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~ 474 (636)
T 4eco_A 395 IFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPK 474 (636)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCS
T ss_pred hhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCH
Confidence 555543 666777777776666666665 56666777777777666666443 36666777777776663333
Q ss_pred cccccc-------ccccEEeccCcccccccCcccc--CCcccceecccCccccCCCChhhhccccCCeeee------cCC
Q 040702 319 LKIGNL-------NVLVQLDLSMNNFSCVIPTKIG--GLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNL------SNN 383 (797)
Q Consensus 319 ~~~~~l-------~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N 383 (797)
..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|++|+| ++|
T Consensus 475 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N 552 (636)
T 4eco_A 475 NSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGN 552 (636)
T ss_dssp SSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCC
T ss_pred HHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccC
Confidence 333322 26667777777666 4455554 66667777777777665 6666666677777766 445
Q ss_pred cCCCCCChhhhccCCCCeEEccCCcCcccCCCCCCCCCCCcccccCCcccc
Q 040702 384 NLSGTIPISLEKLLDLKDINVSFNRLEGEIPREGPFRNLSAESFKGNELLC 434 (797)
Q Consensus 384 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c 434 (797)
++.+.+|..+..+++|+.|++++|++ +.+|.. ..+.++.+++++|++.|
T Consensus 553 ~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 553 RTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNIS 601 (636)
T ss_dssp BCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCE
T ss_pred cccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCcc
Confidence 66666666666677777777777776 344443 12566666666666655
No 8
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=9.2e-49 Score=465.56 Aligned_cols=423 Identities=17% Similarity=0.176 Sum_probs=308.0
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeC-CCCCCCCcCCCc----------------------------------------
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYL-SYNPPSGSIPSF---------------------------------------- 40 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdL-s~N~~~~~~p~~---------------------------------------- 40 (797)
+||++|.++|.+|++|++|++|++||| ++|.++|..|..
T Consensus 328 L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~ 407 (876)
T 4ecn_A 328 LSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDA 407 (876)
T ss_dssp EECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHH
T ss_pred EECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHH
Confidence 689999999999999999999999999 999877763321
Q ss_pred ----------------------------cccCCCccccCCCCCCEEEcccCcccc-----------------cCCcccc-
Q 040702 41 ----------------------------ILCEIPHEIDNLHNMEWMAFSFNKVVG-----------------VVPTTIF- 74 (797)
Q Consensus 41 ----------------------------~l~~ip~~~~~l~~L~~L~ls~N~i~~-----------------~~p~~~~- 74 (797)
-++.||..++++++|++|+|++|++++ .+|..++
T Consensus 408 l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f 487 (876)
T 4ecn_A 408 INRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSW 487 (876)
T ss_dssp HHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCG
T ss_pred hhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhh
Confidence 012277788888888888888888887 3677766
Q ss_pred -CCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCcc-ccc-cCCchhhCCC-------CCCEEEccCCcCcccCCc
Q 040702 75 -NVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNN-FIG-TIPSFIFNAS-------KLSELGLQKNSFSGSIPN 144 (797)
Q Consensus 75 -~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l~-------~L~~L~L~~N~l~~~~~~ 144 (797)
++++|++|+|++|++.+.+|.. +.++++|++|+|++|+ +++ .+|..+..++ +|++|+|++|+|+ .+|.
T Consensus 488 ~~L~~L~~L~Ls~N~l~~~iP~~-l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~ 565 (876)
T 4ecn_A 488 SNLKDLTDVELYNCPNMTQLPDF-LYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPA 565 (876)
T ss_dssp GGCTTCCEEEEESCTTCCSCCGG-GGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCC
T ss_pred ccCCCCCEEECcCCCCCccChHH-HhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCC
Confidence 8888888888888877777744 4578888888888887 776 6777666555 8888888888888 4555
Q ss_pred --cccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCCh
Q 040702 145 --TFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPE 222 (797)
Q Consensus 145 --~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~ 222 (797)
.|.++++|++|+|++|.++.+| . |..+++|+.|+|++|++. .+|..+..++.+|+.|++++|.++ .+|.
T Consensus 566 ~~~l~~L~~L~~L~Ls~N~l~~lp-~------~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 566 SASLQKMVKLGLLDCVHNKVRHLE-A------FGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp HHHHTTCTTCCEEECTTSCCCBCC-C------CCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred hhhhhcCCCCCEEECCCCCcccch-h------hcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 7888888888888888887655 2 677778888888888888 566677777723888888888887 6677
Q ss_pred hhhhhhhhHhhhcccccccccCCCchhh---c--CCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCC
Q 040702 223 EINNLTNLILQLLSLEGNQLEGSIPDDL---C--RLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTL 297 (797)
Q Consensus 223 ~~~~l~~L~L~~L~Ls~N~l~~~~~~~~---~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~ 297 (797)
.+..++.-.|+.|+|++|++.+.+|... . .+++|+.|+|++|+++.+++..+..+++|+.|+|++|.++.+|..+
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~ 716 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENS 716 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTS
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHH
Confidence 7666554112788888888876655322 1 2347888888888888554445557788888888888888887765
Q ss_pred CCC--------CcccEEEccCCcCCCCCCcccc--ccccccEEeccCcccccccCccccCCcccceecccC------ccc
Q 040702 298 WNL--------KDILHLNLSSNFFTGPLPLKIG--NLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEY------NRL 361 (797)
Q Consensus 298 ~~l--------~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~------N~l 361 (797)
+.. ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |++
T Consensus 717 ~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l 794 (876)
T 4ecn_A 717 LKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRI 794 (876)
T ss_dssp SSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBC
T ss_pred hccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccc
Confidence 542 27888888888887 5666665 78888888888888876 577777888888888865 667
Q ss_pred cCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCcccCCCC-CCCCCCCcccccCCccc--cCCCC
Q 040702 362 QGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGEIPRE-GPFRNLSAESFKGNELL--CGMPN 438 (797)
Q Consensus 362 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~l~~~~~~~n~~~--c~~~~ 438 (797)
.+.+|..|..+++|+.|+|++|++ +.+|..+. ++|+.|++++|++....+.. .+........+.+|++. ++|+.
T Consensus 795 ~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I~gC~~ 871 (876)
T 4ecn_A 795 LRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRGCDA 871 (876)
T ss_dssp CCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEEESCGG
T ss_pred cccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccccCCCCC
Confidence 777888888888888888888888 56676654 57888888888876554322 11112333445555543 36665
Q ss_pred cc
Q 040702 439 LQ 440 (797)
Q Consensus 439 ~~ 440 (797)
+.
T Consensus 872 L~ 873 (876)
T 4ecn_A 872 LG 873 (876)
T ss_dssp GC
T ss_pred cc
Confidence 43
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1e-49 Score=416.61 Aligned_cols=246 Identities=24% Similarity=0.304 Sum_probs=211.0
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEec---cCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQ---YGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
++|+..+.||+|+||+||++ ++.||||++.+. .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 67999999999999999975 689999999865 2344578999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
|||+||+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999998754 4899999999999999999999 99999999999999999999999999999997754444
Q ss_pred cccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh----------------hhhhcccccchhc
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE----------------KHLMTKEQPMVRM 727 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~~ 727 (797)
.......+||+.|||||++.+..|+.++|+||+|+..++++.+..++.... .......+++++.
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~ 267 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEK 267 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHH
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccCHHHHHHHHH
Confidence 444567899999999999999999999999999999877776665543311 1233456788999
Q ss_pred cccCCCCCCCChHHHHHhHHHHHHHhccccccccccCCcccccceeeeeeeee
Q 040702 728 GTDLSLGQFPASYSISKYLVYIRELERGKVGITSVAAFPIVHHYLYRTVDYTI 780 (797)
Q Consensus 728 cl~~dp~~RPs~~~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 780 (797)
|+..||++||++.|+... ..+++||||++++|+-
T Consensus 268 lL~~dp~~R~t~~e~~~~-------------------~~i~~Hp~F~~idw~~ 301 (311)
T 4aw0_A 268 LLVLDATKRLGCEEMEGY-------------------GPLKAHPFFESVTWEN 301 (311)
T ss_dssp HSCSSGGGSTTSGGGTCH-------------------HHHHTSGGGTTCCCTT
T ss_pred HccCCHhHCcChHHHcCC-------------------HHHHCCCCcCCCCHHH
Confidence 999999999998876432 2346899999999974
No 10
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-48 Score=446.93 Aligned_cols=420 Identities=21% Similarity=0.216 Sum_probs=342.1
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+||++|.++++.+.+|..+++|++|||++|++++.. |..+.++++|++|++++|+++++.|.+|.++++|++
T Consensus 33 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~--------~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (570)
T 2z63_A 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIE--------DGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 104 (570)
T ss_dssp EECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEEC--------TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred EEccCCccCccChhHhhCCCCceEEECCCCcCCccC--------cccccCchhCCEEeCcCCcCCccCHhhhcCcccccc
Confidence 689999999999999999999999999999865432 356888999999999999999988999999999999
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCcccccc-CCchhhCCCCCCEEEccCCcCcccCCccccCCCCC----Ceee
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGT-IPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNL----KWLG 156 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L----~~L~ 156 (797)
|+|++|+++ .++...+..+++|++|+|++|.+++. +|..|.++++|++|++++|+++++.+..|..+++| +.|+
T Consensus 105 L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~ 183 (570)
T 2z63_A 105 LVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLD 183 (570)
T ss_dssp EECTTSCCC-CSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEE
T ss_pred ccccccccc-cCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcc
Confidence 999999998 77776688999999999999999863 68999999999999999999999989999999998 8999
Q ss_pred ccCccCcCCCCCcccc----------------------------------------------------------------
Q 040702 157 LNDNYLTSSTPELSSL---------------------------------------------------------------- 172 (797)
Q Consensus 157 L~~N~l~~~~~~~~~~---------------------------------------------------------------- 172 (797)
+++|.++.+++.....
T Consensus 184 l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~ 263 (570)
T 2z63_A 184 LSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFR 263 (570)
T ss_dssp CTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEE
T ss_pred cCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhh
Confidence 9999998876642100
Q ss_pred ------------ccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccc
Q 040702 173 ------------SSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGN 240 (797)
Q Consensus 173 ------------~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N 240 (797)
..|..+++|+.|++++|.+.. +|..+..+ +|+.|++++|.+. .+|. ..+++| +.|++++|
T Consensus 264 l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~--~L~~L~l~~n~~~-~l~~--~~l~~L--~~L~l~~n 335 (570)
T 2z63_A 264 LAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF--GWQHLELVNCKFG-QFPT--LKLKSL--KRLTFTSN 335 (570)
T ss_dssp EEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC--CCSEEEEESCBCS-SCCB--CBCSSC--CEEEEESC
T ss_pred hhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC--CccEEeeccCccc-ccCc--cccccc--CEEeCcCC
Confidence 012223444444444444442 23333333 3444444444444 2222 133333 55555555
Q ss_pred cccCCCchhhcCCCCCcEEEccCCcCcccC--CCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCC
Q 040702 241 QLEGSIPDDLCRLAALFQLDLGGNKLSGFV--PACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLP 318 (797)
Q Consensus 241 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~ 318 (797)
.+.+..+. ..+++|++|++++|++++.. +..+..+++|++|++++|.++.+|..+..+++|+.|++++|.+.+..+
T Consensus 336 ~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 413 (570)
T 2z63_A 336 KGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSE 413 (570)
T ss_dssp BSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTT
T ss_pred cccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccc
Confidence 55443332 56788999999999988664 667888999999999999998888778889999999999999997766
Q ss_pred -ccccccccccEEeccCcccccccCccccCCcccceecccCcccc-CCCChhhhccccCCeeeecCCcCCCCCChhhhcc
Q 040702 319 -LKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQ-GSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKL 396 (797)
Q Consensus 319 -~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 396 (797)
..+..+++|+.|++++|.+++..|..|.++++|++|++++|+++ +.+|..+..+++|++|++++|++++..|..|..+
T Consensus 414 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 493 (570)
T 2z63_A 414 FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 493 (570)
T ss_dssp SCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred hhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcc
Confidence 57899999999999999999999999999999999999999997 5789999999999999999999999999999999
Q ss_pred CCCCeEEccCCcCcccCCCC-CCCCCCCcccccCCccccCCCCcc
Q 040702 397 LDLKDINVSFNRLEGEIPRE-GPFRNLSAESFKGNELLCGMPNLQ 440 (797)
Q Consensus 397 ~~L~~L~l~~N~l~~~~p~~-~~~~~l~~~~~~~n~~~c~~~~~~ 440 (797)
++|+.|++++|++++.+|.. ..+..++.+++.+|++.|+|+...
T Consensus 494 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 494 SSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred cCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 99999999999999988763 678899999999999999998654
No 11
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.1e-46 Score=440.50 Aligned_cols=402 Identities=25% Similarity=0.227 Sum_probs=324.7
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCcc---------------ccCC-CccccCCCCCCEEEcccCcc
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFI---------------LCEI-PHEIDNLHNMEWMAFSFNKV 65 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~---------------l~~i-p~~~~~l~~L~~L~ls~N~i 65 (797)
+||++|.++++.|.+|+.+++|++|||++|++++..|..+ ++.+ |..+.++++|++|++++|++
T Consensus 62 L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l 141 (606)
T 3t6q_A 62 LDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHI 141 (606)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCC
T ss_pred EECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcc
Confidence 5778888888878888888888888888887766655432 1222 33455555566666666665
Q ss_pred cccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCcc--EEEc----------------------------------
Q 040702 66 VGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLK--ELHL---------------------------------- 109 (797)
Q Consensus 66 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~--~L~L---------------------------------- 109 (797)
.++.+..+.++++|++|+|++|.++ .++...|..+++|+ +|++
T Consensus 142 ~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~ 220 (606)
T 3t6q_A 142 SSIKLPKGFPTEKLKVLDFQNNAIH-YLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFK 220 (606)
T ss_dssp CCCCCCTTCCCTTCCEEECCSSCCC-EECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHH
T ss_pred cccCcccccCCcccCEEEcccCccc-ccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhh
Confidence 5544334444555555555555555 33333333444444 3444
Q ss_pred -----------------------------------------cCccccccCCchhhCCCCCCEEEccCCcCcccCCccccC
Q 040702 110 -----------------------------------------WGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGN 148 (797)
Q Consensus 110 -----------------------------------------~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~ 148 (797)
++|.+++..+..|.++++|++|+|++|+++ ..|..|.+
T Consensus 221 ~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~ 299 (606)
T 3t6q_A 221 GLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVG 299 (606)
T ss_dssp HTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCS
T ss_pred hccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcc
Confidence 444444444445777889999999999999 46778999
Q ss_pred CCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCC-hhhhccccCCcEEEccCCcccccC--Chhhh
Q 040702 149 LRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILP-RAIGNLSQSMEDFWMDNCNISGSI--PEEIN 225 (797)
Q Consensus 149 l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~~L~~L~L~~n~i~~~~--p~~~~ 225 (797)
+++|++|+|++|.++.+++. .+..+++|++|++++|.+.+..| ..+..++ +|+.|++++|.+.+.. +..+.
T Consensus 300 l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~ 373 (606)
T 3t6q_A 300 LSTLKKLVLSANKFENLCQI-----SASNFPSLTHLSIKGNTKRLELGTGCLENLE-NLRELDLSHDDIETSDCCNLQLR 373 (606)
T ss_dssp CTTCCEEECTTCCCSBGGGG-----CGGGCTTCSEEECCSCSSCCBCCSSTTTTCT-TCCEEECCSSCCCEEEESTTTTT
T ss_pred cccCCEEECccCCcCcCchh-----hhhccCcCCEEECCCCCcccccchhhhhccC-cCCEEECCCCccccccCcchhcc
Confidence 99999999999999988664 47889999999999999985554 5588887 8999999999999876 78899
Q ss_pred hhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCC-CccCCccccccccCCCCCCCC-CCCCCCCCcc
Q 040702 226 NLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPA-CSGNLTNLRKLYLGSNLLTSI-PSTLWNLKDI 303 (797)
Q Consensus 226 ~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L 303 (797)
.+++| ++|++++|.+.+..|..|..+++|++|++++|++.+..+. .+..+++|+.|++++|.++.. |..+..+++|
T Consensus 374 ~l~~L--~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 451 (606)
T 3t6q_A 374 NLSHL--QSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPAL 451 (606)
T ss_dssp TCTTC--CEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTC
T ss_pred cCCCC--CEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCC
Confidence 99998 9999999999999999999999999999999999877654 489999999999999999665 5578889999
Q ss_pred cEEEccCCcCCCC---CCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeee
Q 040702 304 LHLNLSSNFFTGP---LPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNL 380 (797)
Q Consensus 304 ~~L~l~~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 380 (797)
++|++++|.+.+. .+..+..+++|+.|++++|++++..|..|.++++|+.|+|++|++++..|..+..+++| .|+|
T Consensus 452 ~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L 530 (606)
T 3t6q_A 452 QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNL 530 (606)
T ss_dssp CEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEEC
T ss_pred CEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEEC
Confidence 9999999999862 33678999999999999999999999999999999999999999999999999999999 9999
Q ss_pred cCCcCCCCCChhhhccCCCCeEEccCCcCcccCC
Q 040702 381 SNNNLSGTIPISLEKLLDLKDINVSFNRLEGEIP 414 (797)
Q Consensus 381 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 414 (797)
++|++++.+|..+..+++|+.|++++|++.|..+
T Consensus 531 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 531 ASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred cCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 9999999999999999999999999999998765
No 12
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.4e-48 Score=405.73 Aligned_cols=238 Identities=22% Similarity=0.304 Sum_probs=200.9
Q ss_pred cCCCccccccccCCcceeec----------ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD----------GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~----------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 581 (797)
++|...+.||+|+||+||+| +..||||+++.......++|.+|++++++++|||||+++|+|.+++..|+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 57888899999999999986 46799999986655556789999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCC------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEE
Q 040702 582 VLEYMPLGSLEKCLYSGN------------YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHL 649 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~------------~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl 649 (797)
|||||++|+|.++++..+ ..++|.++..|+.|||+||+||| +++|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997542 36899999999999999999999 899999999999999999999999
Q ss_pred EeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccch----------------
Q 040702 650 SDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIR---------------- 712 (797)
Q Consensus 650 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~---------------- 712 (797)
+|||+|+.....+.........||+.|||||.+.++.|+.++||||+|+..++.+. +..++..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~ 249 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL 249 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCC
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC
Confidence 99999987654443333445679999999999999999999999999999876653 3333222
Q ss_pred -hhhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 713 -EEKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 713 -~~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
.+......+.+++..||+.||++|||+.|+.+.|+.+.+.
T Consensus 250 ~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 250 QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 1112334677899999999999999999999998887654
No 13
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-47 Score=407.54 Aligned_cols=238 Identities=21% Similarity=0.302 Sum_probs=194.1
Q ss_pred cCCCccccccccCCcceeec----------ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD----------GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~----------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 581 (797)
++|...++||+|+||+||+| +..||||+++.......++|.+|++++++++|||||+++|+|.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 56778899999999999986 47899999976655556789999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcE
Q 040702 582 VLEYMPLGSLEKCLYSGN--------------YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVA 647 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~--------------~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~ 647 (797)
|||||++|+|.++++... .+++|.++..|+.|||+||+||| +++|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999997542 25899999999999999999999 8999999999999999999999
Q ss_pred EEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccch--------------
Q 040702 648 HLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIR-------------- 712 (797)
Q Consensus 648 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~-------------- 712 (797)
||+|||+|+.....+........+||+.|||||.+.+..|+.++||||+|+..++.+. +..++..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~ 277 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR 277 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTC
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999997654443334456789999999999999999999999999999876654 3332221
Q ss_pred ---hhhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 713 ---EEKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 713 ---~~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
.+....+.+.++++.||+.||++|||+.||++.|+.+.+.
T Consensus 278 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 278 ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1112334677899999999999999999999999888664
No 14
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.7e-46 Score=439.12 Aligned_cols=393 Identities=18% Similarity=0.235 Sum_probs=330.8
Q ss_pred CCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCccc------c---------------------------
Q 040702 21 SSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVV------G--------------------------- 67 (797)
Q Consensus 21 ~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~------~--------------------------- 67 (797)
..++.|||++|.++|.+ |.++++|++|++|+|++|++. +
T Consensus 81 ~~V~~L~L~~~~l~g~l--------p~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~ 152 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRV--------PDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDY 152 (636)
T ss_dssp CCEEEEECTTSCCEEEE--------CGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCC
T ss_pred CCEEEEEecCcccCCcC--------ChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhcc
Confidence 57899999999977664 567899999999999999762 1
Q ss_pred cCCcccc-------------------CCCCCCEEEcc--CCcCcccCCCccccCCCCccEEEccCcccccc---------
Q 040702 68 VVPTTIF-------------------NVSTLKSLYLH--SNSLSGRLPSSADVRLPNLKELHLWGNNFIGT--------- 117 (797)
Q Consensus 68 ~~p~~~~-------------------~l~~L~~L~Ls--~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~--------- 117 (797)
..|..+. ....++.+++. +|++++ +|.. +.++++|++|+|++|.+++.
T Consensus 153 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 153 DPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKA-VMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp CGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGG-GGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred CchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHH-HhcccCCCEEECcCCcccccccccccccc
Confidence 1111111 11123333333 688986 8886 46899999999999999985
Q ss_pred --------CCchhh--CCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCcc-CcC--CCCCccccccCCCCCCCcEE
Q 040702 118 --------IPSFIF--NASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNY-LTS--STPELSSLSSLSNCKYLEYF 184 (797)
Q Consensus 118 --------~~~~~~--~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~-l~~--~~~~~~~~~~l~~l~~L~~L 184 (797)
+|..+. ++++|++|+|++|++.+..|..|+++++|++|+|++|+ ++. +|..+..+..+..+++|++|
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L 310 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEE
Confidence 899988 99999999999999999999999999999999999998 885 66655444445566899999
Q ss_pred EccCCCCCCCCCh--hhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCC-CcEEEc
Q 040702 185 SFSNNPLGGILPR--AIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAA-LFQLDL 261 (797)
Q Consensus 185 ~Ls~N~l~~~~~~--~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L 261 (797)
++++|+++ .+|. .+++++ +|+.|++++|.++|.+| .++.+++| ++|++++|+++ .+|..+..+++ |++|++
T Consensus 311 ~L~~n~l~-~ip~~~~l~~l~-~L~~L~L~~N~l~g~ip-~~~~l~~L--~~L~L~~N~l~-~lp~~l~~l~~~L~~L~L 384 (636)
T 4eco_A 311 YIGYNNLK-TFPVETSLQKMK-KLGMLECLYNQLEGKLP-AFGSEIKL--ASLNLAYNQIT-EIPANFCGFTEQVENLSF 384 (636)
T ss_dssp ECCSSCCS-SCCCHHHHTTCT-TCCEEECCSCCCEEECC-CCEEEEEE--SEEECCSSEEE-ECCTTSEEECTTCCEEEC
T ss_pred ECCCCcCC-ccCchhhhccCC-CCCEEeCcCCcCccchh-hhCCCCCC--CEEECCCCccc-cccHhhhhhcccCcEEEc
Confidence 99999999 6677 899998 89999999999999999 99999998 99999999999 77888999999 999999
Q ss_pred cCCcCcccCCCCccCCc--cccccccCCCCCCC-CCCCCC-------CCCcccEEEccCCcCCCCCCccccccccccEEe
Q 040702 262 GGNKLSGFVPACSGNLT--NLRKLYLGSNLLTS-IPSTLW-------NLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLD 331 (797)
Q Consensus 262 s~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~-lp~~~~-------~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 331 (797)
++|+++ .+|..+..++ +|+.|++++|.++. +|..+. .+++|+.|++++|.++...+..+..+++|+.|+
T Consensus 385 s~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~ 463 (636)
T 4eco_A 385 AHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSIN 463 (636)
T ss_dssp CSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEE
T ss_pred cCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEE
Confidence 999999 5677777655 89999999999954 566676 778999999999999966555677799999999
Q ss_pred ccCcccccccCccccCCc-------ccceecccCccccCCCChhhh--ccccCCeeeecCCcCCCCCChhhhccCCCCeE
Q 040702 332 LSMNNFSCVIPTKIGGLK-------DLQYLFLEYNRLQGSIPNSIG--DLISLKSLNLSNNNLSGTIPISLEKLLDLKDI 402 (797)
Q Consensus 332 Ls~N~l~~~~~~~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 402 (797)
+++|+++.+.+..+.... +|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|
T Consensus 464 Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L 541 (636)
T 4eco_A 464 LMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGF 541 (636)
T ss_dssp CCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEE
T ss_pred CCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEE
Confidence 999999965555555443 9999999999999 7888887 99999999999999997 89999999999999
Q ss_pred Ec------cCCcCcccCCCC-CCCCCCCcccccCCcc
Q 040702 403 NV------SFNRLEGEIPRE-GPFRNLSAESFKGNEL 432 (797)
Q Consensus 403 ~l------~~N~l~~~~p~~-~~~~~l~~~~~~~n~~ 432 (797)
++ ++|++.+.+|.. ..+..++.+++++|..
T Consensus 542 ~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 578 (636)
T 4eco_A 542 GIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI 578 (636)
T ss_dssp ECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred ECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC
Confidence 99 567788888764 5688899999999987
No 15
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.4e-47 Score=397.92 Aligned_cols=236 Identities=22% Similarity=0.316 Sum_probs=192.3
Q ss_pred hcCCCccccccccCCcceeecc--eEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEcc
Q 040702 511 TNRFSENNLIGRGGFGPVYKDG--MEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEYM 586 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~~--~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~~ 586 (797)
.++|...+.||+|+||+||+|. ..||||+++.... ...++|.+|++++++++|||||+++|++.+ +..|+|||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~ 113 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWC 113 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcC
Confidence 3577888999999999999973 6799999875432 234679999999999999999999999865 5689999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcccc
Q 040702 587 PLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLT 666 (797)
Q Consensus 587 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 666 (797)
++|+|.++++.....+++.++..|+.|||+||+||| +++|+||||||+|||+++++.+||+|||+|+..........
T Consensus 114 ~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~ 190 (307)
T 3omv_A 114 EGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp SSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---------
T ss_pred CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCccee
Confidence 999999999877667999999999999999999999 89999999999999999999999999999987644333334
Q ss_pred ccccccCccccccccccc---CccchHHHHHHHhhhhhhhhccccccchhh----------------------hhhhccc
Q 040702 667 QTQTLATIGYMAPDEIFS---GEMRLKCWVNDSLLISVMIVVDANLLIREE----------------------KHLMTKE 721 (797)
Q Consensus 667 ~~~~~gt~~y~aPE~~~~---~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~ 721 (797)
....+||+.|||||.+.. +.|+.++||||+|+..++.+.+..++.... .+....+
T Consensus 191 ~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l 270 (307)
T 3omv_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAM 270 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHH
T ss_pred ecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHH
Confidence 456789999999999863 468999999999999877666555443211 1122346
Q ss_pred ccchhccccCCCCCCCChHHHHHhHHHHH
Q 040702 722 QPMVRMGTDLSLGQFPASYSISKYLVYIR 750 (797)
Q Consensus 722 ~~l~~~cl~~dp~~RPs~~~i~~~l~~i~ 750 (797)
.+++..||+.||++|||+.|+++.++.++
T Consensus 271 ~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 271 KRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp HHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 77899999999999999999999988765
No 16
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=5.5e-48 Score=403.71 Aligned_cols=243 Identities=21% Similarity=0.268 Sum_probs=196.3
Q ss_pred cCCCccccccccCCcceeec--------ceEEEEEEEEecc--CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD--------GMEVAIKVFNLQY--GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~--------~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 581 (797)
++|+..+.||+|+||+||++ ++.||||++++.. ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999964 4689999997553 2234578899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
|||||+||+|.+++...+ .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999998755 4899999999999999999999 999999999999999999999999999999865332
Q ss_pred CccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhhh----------------hhhcccccch
Q 040702 662 DQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREEK----------------HLMTKEQPMV 725 (797)
Q Consensus 662 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~ 725 (797)
. ......+||+.|||||.+.+..|+.++|+||+|+..++++.+..++..... ...+..++++
T Consensus 180 ~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li 257 (304)
T 3ubd_A 180 E--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLL 257 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred C--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence 2 234557899999999999999999999999999998777766655443211 2234567888
Q ss_pred hccccCCCCCCCChHHHHHhHHHHHHHhccccccccccCCcccccceeeeeeeee
Q 040702 726 RMGTDLSLGQFPASYSISKYLVYIRELERGKVGITSVAAFPIVHHYLYRTVDYTI 780 (797)
Q Consensus 726 ~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 780 (797)
+.||+.||++||++.. ...+++++|+||+++||+-
T Consensus 258 ~~~L~~dP~~R~ta~~--------------------~~~~eil~Hp~f~~idw~~ 292 (304)
T 3ubd_A 258 RMLFKRNPANRLGAGP--------------------DGVEEIKRHSFFSTIDWNK 292 (304)
T ss_dssp HHHTCSSGGGSTTCST--------------------TTHHHHHTSGGGTTCCHHH
T ss_pred HHHcccCHHHCCCCCc--------------------CCHHHHHcCccccCCCHHH
Confidence 8899999999998532 1123456899999999974
No 17
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.5e-47 Score=399.15 Aligned_cols=235 Identities=20% Similarity=0.253 Sum_probs=196.9
Q ss_pred cCCCccccccccCCcceeecc----------eEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEE
Q 040702 512 NRFSENNLIGRGGFGPVYKDG----------MEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKA 580 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~~----------~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 580 (797)
++++..+.||+|+||+||+|. +.||||+++.... ...++|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 455667899999999999862 6899999975533 33578999999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC
Q 040702 581 LVLEYMPLGSLEKCLYSGN---------------YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM 645 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~ 645 (797)
+|||||++|+|.+++.... ..++|.++.+|+.|||+||+||| +++||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC
Confidence 9999999999999996532 25899999999999999999999 89999999999999999999
Q ss_pred cEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccch------------
Q 040702 646 VAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIR------------ 712 (797)
Q Consensus 646 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~------------ 712 (797)
.+||+|||+|+.....+........+||+.|||||.+.++.|+.++||||+|+..++.+. +..++..
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~ 262 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN 262 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHT
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 999999999987654444444456789999999999999999999999999999866553 3322222
Q ss_pred -----hhhhhhcccccchhccccCCCCCCCChHHHHHhHHHH
Q 040702 713 -----EEKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYI 749 (797)
Q Consensus 713 -----~~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i 749 (797)
.+.+....+.+++..||+.||++||++.||++.|+.+
T Consensus 263 ~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 263 RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1122334577889999999999999999999988754
No 18
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.2e-46 Score=425.14 Aligned_cols=410 Identities=21% Similarity=0.222 Sum_probs=322.8
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+|+++|.+++ +|..+. ++|++|||++|++++.. |..+.++++|++|++++|+++++.|.+|.++++|++
T Consensus 5 l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~--------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 73 (520)
T 2z7x_B 5 VDRSKNGLIH-VPKDLS--QKTTILNISQNYISELW--------TSDILSLSKLRILIISHNRIQYLDISVFKFNQELEY 73 (520)
T ss_dssp EECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCC--------HHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCE
T ss_pred EecCCCCccc-cccccc--ccccEEECCCCcccccC--------hhhccccccccEEecCCCccCCcChHHhhcccCCCE
Confidence 6899999996 666565 99999999999965432 357889999999999999999999999999999999
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCccccc-cCCchhhCCCCCCEEEccCCcCcccCCccccCCCCC--Ceeecc
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIG-TIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNL--KWLGLN 158 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L--~~L~L~ 158 (797)
|+|++|+|+ .+|.. .+++|++|+|++|++++ ..|..|.++++|++|+|++|+|++ ..|.++++| ++|+|+
T Consensus 74 L~Ls~N~l~-~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~ 146 (520)
T 2z7x_B 74 LDLSHNKLV-KISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLV 146 (520)
T ss_dssp EECCSSCCC-EEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEE
T ss_pred EecCCCcee-ecCcc---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEee
Confidence 999999998 78876 78999999999999987 468999999999999999999986 568888888 999999
Q ss_pred CccC--cCCCC-Cccccc--------------------cCCCCCCCcEEEccCCC-------CCCCCChhhhccc-----
Q 040702 159 DNYL--TSSTP-ELSSLS--------------------SLSNCKYLEYFSFSNNP-------LGGILPRAIGNLS----- 203 (797)
Q Consensus 159 ~N~l--~~~~~-~~~~~~--------------------~l~~l~~L~~L~Ls~N~-------l~~~~~~~~~~l~----- 203 (797)
+|.+ +...+ .+..+. .+.++++|+.|++++|. +.+.+| .+..++
T Consensus 147 ~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L 225 (520)
T 2z7x_B 147 LGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNL 225 (520)
T ss_dssp ECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEE
T ss_pred cccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhc
Confidence 9999 33322 222211 23456777777777776 332222 344443
Q ss_pred ---------------------cCCcEEEccCCcccccCChhh-----hhhhhhHhhhcccccccccCCCchhhcCC---C
Q 040702 204 ---------------------QSMEDFWMDNCNISGSIPEEI-----NNLTNLILQLLSLEGNQLEGSIPDDLCRL---A 254 (797)
Q Consensus 204 ---------------------~~L~~L~L~~n~i~~~~p~~~-----~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l---~ 254 (797)
.+|+.|++++|.+++.+|..+ +.+++| +.+++++|.+ ......+..+ .
T Consensus 226 ~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L--~~l~l~~n~~-~~p~~~~~~~~~~~ 302 (520)
T 2z7x_B 226 TLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKAL--SIHQVVSDVF-GFPQSYIYEIFSNM 302 (520)
T ss_dssp EEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEE--EEEEEEECCC-CSCTHHHHHHHHTC
T ss_pred cccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCcee--Eeccccccce-ecchhhhhcccccC
Confidence 145555555555555555555 555555 5555555555 2222333333 4
Q ss_pred CCcEEEccCCcCcccCCCCccCCccccccccCCCCCCC-CCCCCCCCCcccEEEccCCcCCC--CCCccccccccccEEe
Q 040702 255 ALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTS-IPSTLWNLKDILHLNLSSNFFTG--PLPLKIGNLNVLVQLD 331 (797)
Q Consensus 255 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-lp~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~ 331 (797)
+|+.|++++|.+.... .+..+++|++|++++|.++. +|..+..+++|+.|++++|++++ ..|..++.+++|++|+
T Consensus 303 ~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred ceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 5777777777765432 23688999999999999966 78889999999999999999996 4557799999999999
Q ss_pred ccCccccc-ccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCc
Q 040702 332 LSMNNFSC-VIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLE 410 (797)
Q Consensus 332 Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 410 (797)
+++|.+++ ..+..+..+++|++|++++|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|+.|++++|+++
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC
Confidence 99999998 4445688999999999999999887776664 79999999999999 78888889999999999999999
Q ss_pred ccCCC-CCCCCCCCcccccCCccccCCCC
Q 040702 411 GEIPR-EGPFRNLSAESFKGNELLCGMPN 438 (797)
Q Consensus 411 ~~~p~-~~~~~~l~~~~~~~n~~~c~~~~ 438 (797)
..++. ...+..++.+++.+|++.|+|+.
T Consensus 458 ~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 458 SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 76555 46788899999999999998874
No 19
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.7e-45 Score=427.47 Aligned_cols=390 Identities=19% Similarity=0.125 Sum_probs=326.3
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+||++|.++++.|.+|+.+++|++|||++|++++.. |..++++++|++|++++|+++++.|..|+++++|++
T Consensus 61 L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~--------p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 132 (606)
T 3vq2_A 61 LDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFS--------PGSFSGLTSLENLVAVETKLASLESFPIGQLITLKK 132 (606)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCC--------TTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCE
T ss_pred EeCCCCcccccCHHHhhchhhcCEeECCCCcccccC--------hhhcCCcccCCEEEccCCccccccccccCCCCCCCE
Confidence 689999999999999999999999999999965543 567888889999999999998888788888999999
Q ss_pred EEccCCcCcc-cCCCccccCCCCccEEEccCccccccCCchhhCCCCCC----EEEccCCcCcccCCcccc---------
Q 040702 82 LYLHSNSLSG-RLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLS----ELGLQKNSFSGSIPNTFG--------- 147 (797)
Q Consensus 82 L~Ls~N~l~~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~f~--------- 147 (797)
|+|++|.+++ .+|.. +.++++|++|+|++|++++..+..|..+++|+ +|++++|+++++.+..|.
T Consensus 133 L~L~~n~l~~~~lp~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L 211 (606)
T 3vq2_A 133 LNVAHNFIHSCKLPAY-FSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTL 211 (606)
T ss_dssp EECCSSCCCCCCCCGG-GGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEE
T ss_pred EeCCCCcccceechHh-HhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeec
Confidence 9999998874 34554 46888999999999888877777666555443 566666666554443332
Q ss_pred --------------------------------------------------------------------------------
Q 040702 148 -------------------------------------------------------------------------------- 147 (797)
Q Consensus 148 -------------------------------------------------------------------------------- 147 (797)
T Consensus 212 ~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~ 291 (606)
T 3vq2_A 212 RGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMS 291 (606)
T ss_dssp ESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEE
T ss_pred cCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEE
Confidence
Q ss_pred -------------CCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCC
Q 040702 148 -------------NLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNC 214 (797)
Q Consensus 148 -------------~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n 214 (797)
.+++|++|++++|.+..++ .+ .+++|+.|++++|+..+.. .+..++ +|+.|++++|
T Consensus 292 l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp-------~~-~l~~L~~L~l~~n~~~~~~--~~~~l~-~L~~L~ls~n 360 (606)
T 3vq2_A 292 LAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFP-------TL-DLPFLKSLTLTMNKGSISF--KKVALP-SLSYLDLSRN 360 (606)
T ss_dssp EESCCCCCCCCCCTTCCCSEEEEESCCCSSCC-------CC-CCSSCCEEEEESCSSCEEC--CCCCCT-TCCEEECCSS
T ss_pred ecCccchhhhhccccccCCEEEcccccCcccc-------cC-CCCccceeeccCCcCccch--hhccCC-CCCEEECcCC
Confidence 2334444444444443333 25 7899999999999655433 566777 8999999999
Q ss_pred ccccc--CChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCC-CCccCCccccccccCCCCCC
Q 040702 215 NISGS--IPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVP-ACSGNLTNLRKLYLGSNLLT 291 (797)
Q Consensus 215 ~i~~~--~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 291 (797)
.+++. .|..+..+++| ++|++++|.+.+ .|..|..+++|+.|++++|++.+..| ..+..+++|++|++++|.++
T Consensus 361 ~l~~~~~~~~~~~~~~~L--~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 437 (606)
T 3vq2_A 361 ALSFSGCCSYSDLGTNSL--RHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTK 437 (606)
T ss_dssp CEEEEEECCHHHHCCSCC--CEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCE
T ss_pred ccCCCcchhhhhccCCcc--cEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCC
Confidence 99977 48899999998 999999999996 55889999999999999999998877 68999999999999999995
Q ss_pred C-CCCCCCCCCcccEEEccCCcCCC-CCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhh
Q 040702 292 S-IPSTLWNLKDILHLNLSSNFFTG-PLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSI 369 (797)
Q Consensus 292 ~-lp~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 369 (797)
. .|..+..+++|+.|++++|.+++ ..|..|+.+++|+.|++++|++++..|..|.++++|++|+|++|++++..|..|
T Consensus 438 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 517 (606)
T 3vq2_A 438 IDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHY 517 (606)
T ss_dssp ECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGT
T ss_pred ccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHc
Confidence 5 56788899999999999999997 478899999999999999999999999999999999999999999999889999
Q ss_pred hccccCCeeeecCCcCCCCCChhhhccC-CCCeEEccCCcCcccCCC
Q 040702 370 GDLISLKSLNLSNNNLSGTIPISLEKLL-DLKDINVSFNRLEGEIPR 415 (797)
Q Consensus 370 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~ 415 (797)
..+++|++|+|++|+++ .+|..+..++ +|+.|++++|++.|..+.
T Consensus 518 ~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 518 NQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred cCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99999999999999999 5676799997 699999999999987654
No 20
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1e-44 Score=429.58 Aligned_cols=414 Identities=22% Similarity=0.232 Sum_probs=302.1
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+|.+++.++. +|..+. +++++|||++|++++.. |..+.++++|++|++++|+++++.|.+|.++++|++
T Consensus 9 ~~cs~~~L~~-ip~~~~--~~l~~L~Ls~n~l~~~~--------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 77 (680)
T 1ziw_A 9 ADCSHLKLTQ-VPDDLP--TNITVLNLTHNQLRRLP--------AANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKV 77 (680)
T ss_dssp EECCSSCCSS-CCSCSC--TTCSEEECCSSCCCCCC--------GGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCE
T ss_pred eECCCCCccc-cccccC--CCCcEEECCCCCCCCcC--------HHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCE
Confidence 4678888865 555453 89999999999965432 235888999999999999999999999999999999
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCcc
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNY 161 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~ 161 (797)
|+|++|+++ .+|...|.++++|++|+|++|++++..|..|.++++|++|+|++|+++++.+..|.++++|++|+|++|.
T Consensus 78 L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 156 (680)
T 1ziw_A 78 LNLQHNELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNK 156 (680)
T ss_dssp EECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSC
T ss_pred EECCCCccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCc
Confidence 999999998 8888888899999999999999998888899999999999999999999999999999999999999999
Q ss_pred CcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccc--------------------------cCCcEEEccCCc
Q 040702 162 LTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLS--------------------------QSMEDFWMDNCN 215 (797)
Q Consensus 162 l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--------------------------~~L~~L~L~~n~ 215 (797)
++..++... .+..+++|+.|++++|++.++.|..|..++ .+|+.|++++|.
T Consensus 157 l~~~~~~~~---~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~ 233 (680)
T 1ziw_A 157 IQALKSEEL---DIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQ 233 (680)
T ss_dssp CCCBCHHHH---GGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSC
T ss_pred ccccCHHHh---hccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCc
Confidence 988765421 123457889999999999888887776542 257778888888
Q ss_pred ccccCChhhhhhhh--hHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCC--
Q 040702 216 ISGSIPEEINNLTN--LILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLT-- 291 (797)
Q Consensus 216 i~~~~p~~~~~l~~--L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-- 291 (797)
+.+..|.+|.+++. | ++|++++|++.++.+..|..+++|++|++++|++.+..|..|.++++|+.|++++|...
T Consensus 234 l~~~~~~~~~~l~~~~L--~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~ 311 (680)
T 1ziw_A 234 LSTTSNTTFLGLKWTNL--TMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQS 311 (680)
T ss_dssp CCEECTTTTGGGGGSCC--CEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC-
T ss_pred ccccChhHhhccCcCCC--CEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcc
Confidence 88888888887765 6 88888888888888888888888888888888888877777777777777666665432
Q ss_pred ----CCCC----CCCCCCcccEEEccCCcCCCCCCccccccccccEEecc----------------------------Cc
Q 040702 292 ----SIPS----TLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLS----------------------------MN 335 (797)
Q Consensus 292 ----~lp~----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls----------------------------~N 335 (797)
.+|. .+..+++|++|++++|.+++..+..|.++++|++|+++ +|
T Consensus 312 ~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n 391 (680)
T 1ziw_A 312 ISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKN 391 (680)
T ss_dssp -----CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTS
T ss_pred cccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCC
Confidence 2332 44455666666666666665555555555444444443 44
Q ss_pred ccccccCccccCCcccceecccCccccCCCC-hhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCc--cc
Q 040702 336 NFSCVIPTKIGGLKDLQYLFLEYNRLQGSIP-NSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLE--GE 412 (797)
Q Consensus 336 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~ 412 (797)
+++++.|..|..+++|+.|+|++|++.+.+| ..|..+++|++|++++|++++..+..|..+++|+.|++++|.++ +.
T Consensus 392 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 471 (680)
T 1ziw_A 392 KISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDS 471 (680)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTC
T ss_pred CCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccccccccc
Confidence 4444555556666666666666666654333 45566666666666666665555555555555555555555554 22
Q ss_pred CCC-CCCCCCCCcccccCCcc
Q 040702 413 IPR-EGPFRNLSAESFKGNEL 432 (797)
Q Consensus 413 ~p~-~~~~~~l~~~~~~~n~~ 432 (797)
+|. ...+..++.+++++|..
T Consensus 472 ~p~~~~~l~~L~~L~Ls~N~l 492 (680)
T 1ziw_A 472 SPSPFQPLRNLTILDLSNNNI 492 (680)
T ss_dssp SSCTTTTCTTCCEEECCSSCC
T ss_pred CCcccccCCCCCEEECCCCCC
Confidence 222 24455566666666643
No 21
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.6e-46 Score=396.91 Aligned_cols=226 Identities=21% Similarity=0.211 Sum_probs=196.7
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEcc
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEYM 586 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~~ 586 (797)
+.|+..++||+|+||+||++ |+.||||+++.......+.+.+|+++|++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 56999999999999999985 6899999998776666788999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcccc
Q 040702 587 PLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLT 666 (797)
Q Consensus 587 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 666 (797)
+||+|.+++... .+++.++..|+.||+.||+||| +++|+||||||+|||++.+|.+||+|||+|+.+..... .
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--C
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--c
Confidence 999999999765 3899999999999999999999 99999999999999999999999999999987643322 3
Q ss_pred ccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh-------------------hhhhcccccchhc
Q 040702 667 QTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE-------------------KHLMTKEQPMVRM 727 (797)
Q Consensus 667 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~l~~~ 727 (797)
....+||+.|||||++.+..|+.++||||+|++.++++.+..++.... .......+++++.
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 306 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 306 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHH
Confidence 456789999999999999999999999999999877766655443211 1223456788999
Q ss_pred cccCCCCCCCChHHHHH
Q 040702 728 GTDLSLGQFPASYSISK 744 (797)
Q Consensus 728 cl~~dp~~RPs~~~i~~ 744 (797)
||..||++|||+.|+++
T Consensus 307 ~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 307 LLVRDPAQRATAAELLK 323 (346)
T ss_dssp HSCSSTTTSCCHHHHTT
T ss_pred HcCCChhHCcCHHHHhc
Confidence 99999999999887764
No 22
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7.5e-46 Score=428.09 Aligned_cols=411 Identities=22% Similarity=0.231 Sum_probs=302.4
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+||++|.+++..+..|..+++|++|||++|++++.. |..++.+++|++|++++|++++..|..|+++++|++
T Consensus 31 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~--------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 102 (549)
T 2z81_A 31 LDLSFNKITYIGHGDLRACANLQVLILKSSRINTIE--------GDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKY 102 (549)
T ss_dssp EECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEEC--------TTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCE
T ss_pred EECcCCccCccChhhhhcCCcccEEECCCCCcCccC--------hhhccccccCCEEECCCCccCccCHHHhccCCCCcE
Confidence 577888888887778888888888888888755433 345677778888888888888777777888888888
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCcc-ccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCc
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNN-FIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDN 160 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N 160 (797)
|+|++|.+++.-....+..+++|++|+|++|+ +....+..|.++++|++|+|++|++++..|..|.++++|++|++++|
T Consensus 103 L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 103 LNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLS 182 (549)
T ss_dssp EECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECS
T ss_pred EECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccC
Confidence 88888887631112345677888888888887 44344467777888888888888888777777777777777777777
Q ss_pred cCcCCCCCccccccCCCCCCCcEEEccCCCCCCCC--ChhhhccccCCc----------------------------EEE
Q 040702 161 YLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGIL--PRAIGNLSQSME----------------------------DFW 210 (797)
Q Consensus 161 ~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~~L~----------------------------~L~ 210 (797)
.+..++..+ +..+++|++|++++|++.+.. |..+.....+|+ .++
T Consensus 183 ~~~~~~~~~-----~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~ 257 (549)
T 2z81_A 183 ESAFLLEIF-----ADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVE 257 (549)
T ss_dssp BSTTHHHHH-----HHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEE
T ss_pred cccccchhh-----HhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccc
Confidence 665544321 334667777777777777642 111111111344 444
Q ss_pred ccCCcccccC-----------------------------------ChhhhhhhhhHhhhcccccccccCCCchhh-cCCC
Q 040702 211 MDNCNISGSI-----------------------------------PEEINNLTNLILQLLSLEGNQLEGSIPDDL-CRLA 254 (797)
Q Consensus 211 L~~n~i~~~~-----------------------------------p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~-~~l~ 254 (797)
+++|.+.+.. +..+....+| +.|++++|.+.. +|..+ ..++
T Consensus 258 l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L--~~L~l~~n~l~~-ip~~~~~~l~ 334 (549)
T 2z81_A 258 FDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKV--KRITVENSKVFL-VPCSFSQHLK 334 (549)
T ss_dssp EESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTC--CEEEEESSCCCC-CCHHHHHHCT
T ss_pred cccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccc--eEEEeccCcccc-CCHHHHhcCc
Confidence 4444333210 0111222344 788888888874 45444 6799
Q ss_pred CCcEEEccCCcCcccCC---CCccCCccccccccCCCCCCCCCC---CCCCCCcccEEEccCCcCCCCCCcccccccccc
Q 040702 255 ALFQLDLGGNKLSGFVP---ACSGNLTNLRKLYLGSNLLTSIPS---TLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLV 328 (797)
Q Consensus 255 ~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~lp~---~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 328 (797)
+|++|++++|++++..| ..++.+++|++|+|++|.++.+|. .+..+++|++|++++|+++ .+|..+..+++|+
T Consensus 335 ~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~ 413 (549)
T 2z81_A 335 SLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMR 413 (549)
T ss_dssp TCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCC
T ss_pred cccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhccccccc
Confidence 99999999999987653 457889999999999999988763 4778999999999999998 5677888999999
Q ss_pred EEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCc
Q 040702 329 QLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNR 408 (797)
Q Consensus 329 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 408 (797)
+|++++|.++.. |..+ .++|++|+|++|++++.. ..+++|++|+|++|+++ .+|. ...+++|+.|++++|+
T Consensus 414 ~L~Ls~N~l~~l-~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~ 484 (549)
T 2z81_A 414 FLNLSSTGIRVV-KTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQ 484 (549)
T ss_dssp EEECTTSCCSCC-CTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSC
T ss_pred EEECCCCCcccc-cchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCc
Confidence 999999999854 4333 268999999999998643 57899999999999998 5665 4679999999999999
Q ss_pred CcccCCC-CCCCCCCCcccccCCccccCCCC
Q 040702 409 LEGEIPR-EGPFRNLSAESFKGNELLCGMPN 438 (797)
Q Consensus 409 l~~~~p~-~~~~~~l~~~~~~~n~~~c~~~~ 438 (797)
+++.+|. ...+..++.+++++|++.|+|+.
T Consensus 485 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 485 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred cCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 9998886 46788899999999999998874
No 23
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.9e-45 Score=433.59 Aligned_cols=391 Identities=19% Similarity=0.285 Sum_probs=338.6
Q ss_pred CCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEc-ccCccccc-------------------------------
Q 040702 21 SSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAF-SFNKVVGV------------------------------- 68 (797)
Q Consensus 21 ~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~l-s~N~i~~~------------------------------- 68 (797)
..++.|||++|.++|.+ |.++++|++|++|+| ++|++.+.
T Consensus 323 ~~V~~L~Ls~~~L~G~i--------p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~ 394 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRV--------PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDY 394 (876)
T ss_dssp SCEEEEECTTTCCEEEE--------CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCC
T ss_pred CCEEEEECccCCCCCcC--------chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhcc
Confidence 67999999999977664 567899999999999 77765443
Q ss_pred ---------------------------------------------CCccccCCCCCCEEEccCCcCcc------------
Q 040702 69 ---------------------------------------------VPTTIFNVSTLKSLYLHSNSLSG------------ 91 (797)
Q Consensus 69 ---------------------------------------------~p~~~~~l~~L~~L~Ls~N~l~~------------ 91 (797)
+|..|+++++|+.|+|++|+|++
T Consensus 395 ~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~ 474 (876)
T 4ecn_A 395 DQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANS 474 (876)
T ss_dssp CGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred CcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCccccccccccc
Confidence 78899999999999999999996
Q ss_pred -----cCCCcc-ccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCc-Ccc-cCCccccCCC-------CCCeee
Q 040702 92 -----RLPSSA-DVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNS-FSG-SIPNTFGNLR-------NLKWLG 156 (797)
Q Consensus 92 -----~l~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~f~~l~-------~L~~L~ 156 (797)
.+|..+ |.++++|++|+|++|++.+.+|..|.++++|++|+|++|+ |++ ..|..|.+++ +|++|+
T Consensus 475 n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~ 554 (876)
T 4ecn_A 475 DYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554 (876)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEE
T ss_pred ccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEE
Confidence 288876 5689999999999999999999999999999999999998 987 6787666665 999999
Q ss_pred ccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhh-hHhhhc
Q 040702 157 LNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTN-LILQLL 235 (797)
Q Consensus 157 L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~-L~L~~L 235 (797)
|++|.++.+|.. ..|.++++|+.|+|++|++. .+| .|..++ +|+.|++++|.++ .+|..+..+++ | ++|
T Consensus 555 Ls~N~L~~ip~~----~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~-~L~~L~Ls~N~l~-~lp~~l~~l~~~L--~~L 624 (876)
T 4ecn_A 555 MGYNNLEEFPAS----ASLQKMVKLGLLDCVHNKVR-HLE-AFGTNV-KLTDLKLDYNQIE-EIPEDFCAFTDQV--EGL 624 (876)
T ss_dssp CCSSCCCBCCCH----HHHTTCTTCCEEECTTSCCC-BCC-CCCTTS-EESEEECCSSCCS-CCCTTSCEECTTC--CEE
T ss_pred eeCCcCCccCCh----hhhhcCCCCCEEECCCCCcc-cch-hhcCCC-cceEEECcCCccc-cchHHHhhccccC--CEE
Confidence 999999977750 02778899999999999999 666 888887 8999999999999 89989999998 8 999
Q ss_pred ccccccccCCCchhhcCCCC--CcEEEccCCcCcccCCCCc---c--CCccccccccCCCCCCCCCCCCC-CCCcccEEE
Q 040702 236 SLEGNQLEGSIPDDLCRLAA--LFQLDLGGNKLSGFVPACS---G--NLTNLRKLYLGSNLLTSIPSTLW-NLKDILHLN 307 (797)
Q Consensus 236 ~Ls~N~l~~~~~~~~~~l~~--L~~L~Ls~N~l~~~~~~~~---~--~l~~L~~L~L~~N~l~~lp~~~~-~l~~L~~L~ 307 (797)
+|++|.++ .+|..+..+.. |+.|+|++|++.+.+|... . .+++|+.|+|++|.++.+|..++ .+++|+.|+
T Consensus 625 ~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~ 703 (876)
T 4ecn_A 625 GFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTII 703 (876)
T ss_dssp ECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEE
T ss_pred ECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEE
Confidence 99999999 67788877654 9999999999998766432 2 34589999999999999998765 789999999
Q ss_pred ccCCcCCCCCCccccc-------cccccEEeccCcccccccCcccc--CCcccceecccCccccCCCChhhhccccCCee
Q 040702 308 LSSNFFTGPLPLKIGN-------LNVLVQLDLSMNNFSCVIPTKIG--GLKDLQYLFLEYNRLQGSIPNSIGDLISLKSL 378 (797)
Q Consensus 308 l~~N~l~~~~~~~~~~-------l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 378 (797)
+++|.++...+..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|
T Consensus 704 Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L 781 (876)
T 4ecn_A 704 LSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAF 781 (876)
T ss_dssp CCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEE
T ss_pred CCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEE
Confidence 9999999544444432 349999999999999 5677776 99999999999999997 79899999999999
Q ss_pred eecC------CcCCCCCChhhhccCCCCeEEccCCcCcccCCCCCCCCCCCcccccCCcccc
Q 040702 379 NLSN------NNLSGTIPISLEKLLDLKDINVSFNRLEGEIPREGPFRNLSAESFKGNELLC 434 (797)
Q Consensus 379 ~Ls~------N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c 434 (797)
+|++ |++.+.+|..+..+++|+.|++++|++ +.+|.. ....++.+++++|++..
T Consensus 782 ~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 782 GIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIADNPNIS 841 (876)
T ss_dssp ECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECCSCTTCE
T ss_pred ECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECCCCCCCc
Confidence 9976 889999999999999999999999999 566664 23689999999998754
No 24
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2e-46 Score=398.44 Aligned_cols=230 Identities=19% Similarity=0.221 Sum_probs=191.1
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
.++|+..+.||+|+||+||++ ++.||||++++.... ..+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 368999999999999999985 689999999866432 3467899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 584 EYMPLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+||+|.+++...+. .+++.+++.|+.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 99999999999976543 5789999999999999999999 9999999999999999999999999999999764321
Q ss_pred ccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh-----------------hhhhcccccch
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE-----------------KHLMTKEQPMV 725 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~l~ 725 (797)
......+||+.|||||++.+..|+.++|+||+|++.++++.+..++.... ......+++++
T Consensus 180 --~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li 257 (350)
T 4b9d_A 180 --ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLV 257 (350)
T ss_dssp --HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHH
T ss_pred --ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHH
Confidence 12345789999999999999999999999999999877766655443211 12234567899
Q ss_pred hccccCCCCCCCChHHHHHh
Q 040702 726 RMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 726 ~~cl~~dp~~RPs~~~i~~~ 745 (797)
+.||+.||++|||+.|+++.
T Consensus 258 ~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 258 SQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp HHHTCSSGGGSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999763
No 25
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.7e-46 Score=393.80 Aligned_cols=232 Identities=20% Similarity=0.225 Sum_probs=193.2
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
.+.|...++||+|+||+||++ ++.||||+++... ...+|+.++++++|||||++++++.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 356888899999999999985 6899999997542 234799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC-cEEEEeecCCccCCccCcc
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM-VAHLSDFGMAKPLLEEDQS 664 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~-~~kl~DFGla~~~~~~~~~ 664 (797)
|+||+|.++++..+ .+++..+..|+.||+.||+||| +++|+||||||+|||++.+| .+||+|||+|+.+..+...
T Consensus 132 ~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 99999999998755 4999999999999999999999 99999999999999999987 6999999999876443221
Q ss_pred ---ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccch-------------------hhhhhhcccc
Q 040702 665 ---LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIR-------------------EEKHLMTKEQ 722 (797)
Q Consensus 665 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~ 722 (797)
......+||+.|||||++.+..|+.++||||+|++.++++.+..++.. .+......+.
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~ 287 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTA 287 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHH
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHH
Confidence 122346899999999999999999999999999998776665544322 1122334567
Q ss_pred cchhccccCCCCCCCChHHHHHhHHHHHH
Q 040702 723 PMVRMGTDLSLGQFPASYSISKYLVYIRE 751 (797)
Q Consensus 723 ~l~~~cl~~dp~~RPs~~~i~~~l~~i~~ 751 (797)
++++.||+.||.+|||+.|+++.+.....
T Consensus 288 ~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 288 QAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 88999999999999999999988776543
No 26
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.6e-45 Score=398.77 Aligned_cols=226 Identities=21% Similarity=0.211 Sum_probs=197.0
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEcc
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEYM 586 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~~ 586 (797)
+.|+..+.||+|+||.||++ |+.||||+++.......+.+.+|+.+|++++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999985 6899999998776666788999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcccc
Q 040702 587 PLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLT 666 (797)
Q Consensus 587 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 666 (797)
+||+|.+++.... +++.++..|+.||+.||+||| +++|+||||||+|||++.+|.+||+|||+|+.+.... ..
T Consensus 231 ~gG~L~~~i~~~~--l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 303 (423)
T 4fie_A 231 EGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 303 (423)
T ss_dssp TTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--CC
T ss_pred CCCcHHHHHhccC--CCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--cc
Confidence 9999999997654 899999999999999999999 9999999999999999999999999999998764332 23
Q ss_pred ccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhhh-------------------hhhcccccchhc
Q 040702 667 QTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREEK-------------------HLMTKEQPMVRM 727 (797)
Q Consensus 667 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~l~~~ 727 (797)
....+||+.|||||++.+..|+.++||||+|++.++++.+..++..... .....++++++.
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHH
Confidence 4567899999999999999999999999999998777766555432111 123356788999
Q ss_pred cccCCCCCCCChHHHHH
Q 040702 728 GTDLSLGQFPASYSISK 744 (797)
Q Consensus 728 cl~~dp~~RPs~~~i~~ 744 (797)
||..||++|||+.|+++
T Consensus 384 ~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 384 LLVRDPAQRATAAELLK 400 (423)
T ss_dssp HSCSSTTTSCCHHHHTT
T ss_pred HcCCChhHCcCHHHHhc
Confidence 99999999999887754
No 27
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-44 Score=415.86 Aligned_cols=390 Identities=21% Similarity=0.214 Sum_probs=338.1
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+||++|.++++.+..|+.+++|++|||++|++++.. |..+.++++|++|++++|+++++.+..|+++++|++
T Consensus 57 L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~--------~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~ 128 (570)
T 2z63_A 57 LDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA--------LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKE 128 (570)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEEC--------TTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCE
T ss_pred EECCCCcCCccCcccccCchhCCEEeCcCCcCCccC--------HhhhcCccccccccccccccccCCCccccccccccE
Confidence 689999999999999999999999999999965433 356788899999999999998877777889999999
Q ss_pred EEccCCcCcc-cCCCccccCCCCccEEEccCccccccCCchhhCCCCC----CEEEccCCcCcccCCc------------
Q 040702 82 LYLHSNSLSG-RLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKL----SELGLQKNSFSGSIPN------------ 144 (797)
Q Consensus 82 L~Ls~N~l~~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~~L~L~~N~l~~~~~~------------ 144 (797)
|+|++|.+++ .+|.. +.++++|++|++++|++++..+..|..+++| ++|++++|.++++.++
T Consensus 129 L~L~~n~l~~~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l 207 (570)
T 2z63_A 129 LNVAHNLIQSFKLPEY-FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTL 207 (570)
T ss_dssp EECCSSCCCCCCCCGG-GGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEE
T ss_pred EecCCCccceecChhh-hcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEec
Confidence 9999999874 24544 5688999999999999888777888888777 7888888877665543
Q ss_pred ---------------------------------------------------------------------cccCCCCCCee
Q 040702 145 ---------------------------------------------------------------------TFGNLRNLKWL 155 (797)
Q Consensus 145 ---------------------------------------------------------------------~f~~l~~L~~L 155 (797)
.|..+++|++|
T Consensus 208 ~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L 287 (570)
T 2z63_A 208 RNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSF 287 (570)
T ss_dssp ESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEE
T ss_pred ccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEE
Confidence 34456788888
Q ss_pred eccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhc
Q 040702 156 GLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLL 235 (797)
Q Consensus 156 ~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L 235 (797)
++++|.++.++.. +..+ +|+.|++++|.+..+.. ..++ +|+.|++++|.+.+..+. ..+++| ++|
T Consensus 288 ~l~~~~l~~l~~~------~~~~-~L~~L~l~~n~~~~l~~---~~l~-~L~~L~l~~n~~~~~~~~--~~~~~L--~~L 352 (570)
T 2z63_A 288 SLVSVTIERVKDF------SYNF-GWQHLELVNCKFGQFPT---LKLK-SLKRLTFTSNKGGNAFSE--VDLPSL--EFL 352 (570)
T ss_dssp EEESCEECSCCBC------CSCC-CCSEEEEESCBCSSCCB---CBCS-SCCEEEEESCBSCCBCCC--CBCTTC--CEE
T ss_pred EecCccchhhhhh------hccC-CccEEeeccCcccccCc---cccc-ccCEEeCcCCcccccccc--ccCCCC--CEE
Confidence 8888888877654 5566 89999999999995543 3455 899999999999877765 667777 999
Q ss_pred ccccccccCCC--chhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCC--CCCCCCcccEEEccCC
Q 040702 236 SLEGNQLEGSI--PDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPS--TLWNLKDILHLNLSSN 311 (797)
Q Consensus 236 ~Ls~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~--~~~~l~~L~~L~l~~N 311 (797)
++++|.+++.. +..+..+++|++|++++|.+.+..+. +..+++|+.|++++|.++.++. .+..+++|+.|++++|
T Consensus 353 ~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n 431 (570)
T 2z63_A 353 DLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 431 (570)
T ss_dssp ECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTS
T ss_pred eCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCC
Confidence 99999998665 78899999999999999999987665 9999999999999999976643 6778999999999999
Q ss_pred cCCCCCCccccccccccEEeccCcccc-cccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCC
Q 040702 312 FFTGPLPLKIGNLNVLVQLDLSMNNFS-CVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIP 390 (797)
Q Consensus 312 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 390 (797)
.+.+..|..|.++++|+.|++++|.++ +..|..|..+++|++|++++|++++..|..|..+++|++|++++|++++..|
T Consensus 432 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 511 (570)
T 2z63_A 432 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPD 511 (570)
T ss_dssp CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCH
Confidence 999999999999999999999999997 5789999999999999999999998889999999999999999999999989
Q ss_pred hhhhccCCCCeEEccCCcCcccCCCC
Q 040702 391 ISLEKLLDLKDINVSFNRLEGEIPRE 416 (797)
Q Consensus 391 ~~~~~l~~L~~L~l~~N~l~~~~p~~ 416 (797)
..|..+++|+.|++++|+++|.+|..
T Consensus 512 ~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 512 GIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp TTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred HHhhcccCCcEEEecCCcccCCCcch
Confidence 99999999999999999999988764
No 28
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.8e-45 Score=385.10 Aligned_cols=227 Identities=22% Similarity=0.311 Sum_probs=176.6
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEeccCC-cchhHHHHHHHhhhccCCceeEeeeeeecCC--------
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG-AFKSFDIECGMMKRIRHRNLIKIISSCSNDD-------- 577 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~-------- 577 (797)
++|+..+.||+|+||+||++ ++.||||+++..... ..+.+.+|++++++++|||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 56999999999999999975 689999999865432 3467899999999999999999999987544
Q ss_pred ----eEEEEEEccCCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEe
Q 040702 578 ----FKALVLEYMPLGSLEKCLYSGNY--ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSD 651 (797)
Q Consensus 578 ----~~~lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 651 (797)
..|+|||||++|+|.+++..... ..++..++.|+.||++||+||| +++|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 36999999999999999987653 3566778899999999999999 99999999999999999999999999
Q ss_pred ecCCccCCccCcc----------ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh--------
Q 040702 652 FGMAKPLLEEDQS----------LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE-------- 713 (797)
Q Consensus 652 FGla~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~-------- 713 (797)
||+|+........ ...++.+||+.|||||++.+..|+.++|+||+|+..++++. |. ....
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~-Pf-~~~~~~~~~~~~ 239 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY-PF-STQMERVRTLTD 239 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS-CC-SSHHHHHHHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc-CC-CCccHHHHHHHH
Confidence 9999876433211 12244689999999999999999999999999999866553 21 1111
Q ss_pred ---------hhhhhcccccchhccccCCCCCCCChHHHH
Q 040702 714 ---------EKHLMTKEQPMVRMGTDLSLGQFPASYSIS 743 (797)
Q Consensus 714 ---------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~ 743 (797)
..+..+...++++.|++.||++|||+.|++
T Consensus 240 ~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil 278 (299)
T 4g31_A 240 VRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINII 278 (299)
T ss_dssp HHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 111222345789999999999999987764
No 29
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-44 Score=431.83 Aligned_cols=416 Identities=22% Similarity=0.198 Sum_probs=323.4
Q ss_pred CCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCccc-ccCCccccCCCCCCE
Q 040702 3 SLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVV-GVVPTTIFNVSTLKS 81 (797)
Q Consensus 3 ~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~-~~~p~~~~~l~~L~~ 81 (797)
|.+++.++++.. .+++|++||||+|++++.. |..+.++++|++|+|++|++. .+.|.+|.++++|++
T Consensus 10 dcs~~~L~~vP~----lp~~l~~LdLs~N~i~~i~--------~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~ 77 (844)
T 3j0a_A 10 FYRFCNLTQVPQ----VLNTTERLLLSFNYIRTVT--------ASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRI 77 (844)
T ss_dssp EESCCCSSCCCS----SCTTCCEEEEESCCCCEEC--------SSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCE
T ss_pred EccCCCCCCCCC----CCCCcCEEECCCCcCCccC--------hhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCE
Confidence 567778876543 5789999999999966443 567899999999999999554 445899999999999
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCccccccCCch--hhCCCCCCEEEccCCcCcccCC-ccccCCCCCCeeecc
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSF--IFNASKLSELGLQKNSFSGSIP-NTFGNLRNLKWLGLN 158 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~-~~f~~l~~L~~L~L~ 158 (797)
|+|++|+|+ .++...|.++++|++|+|++|.+++..|.. |.++++|++|+|++|.++++.+ ..|+++++|++|+|+
T Consensus 78 L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls 156 (844)
T 3j0a_A 78 LDLGSSKIY-FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFS 156 (844)
T ss_dssp EECTTCCCC-EECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEE
T ss_pred EECCCCcCc-ccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECC
Confidence 999999998 555566789999999999999999866654 8999999999999999998765 589999999999999
Q ss_pred CccCcCCCCC-cccc--------------------ccCCCCCC------CcEEEccCCCCCCCCChhhhcc---------
Q 040702 159 DNYLTSSTPE-LSSL--------------------SSLSNCKY------LEYFSFSNNPLGGILPRAIGNL--------- 202 (797)
Q Consensus 159 ~N~l~~~~~~-~~~~--------------------~~l~~l~~------L~~L~Ls~N~l~~~~~~~~~~l--------- 202 (797)
+|.++...+. +..+ ..+..+++ |+.|++++|.+.+..+..+...
T Consensus 157 ~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L 236 (844)
T 3j0a_A 157 SNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSL 236 (844)
T ss_dssp SSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEE
T ss_pred CCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccce
Confidence 9999876553 1111 01122222 7777777777665555444321
Q ss_pred ----------------------------ccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCC
Q 040702 203 ----------------------------SQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLA 254 (797)
Q Consensus 203 ----------------------------~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~ 254 (797)
..+++.|++++|.+.+..|..|..+++| +.|+|++|++.++.+.+|..++
T Consensus 237 ~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L--~~L~L~~n~i~~~~~~~~~~l~ 314 (844)
T 3j0a_A 237 ILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDL--KVLNLAYNKINKIADEAFYGLD 314 (844)
T ss_dssp ECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCC--CEEEEESCCCCEECTTTTTTCS
T ss_pred ecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCC--CEEECCCCcCCCCChHHhcCCC
Confidence 1367888888888888778888888877 8888888888888888888888
Q ss_pred CCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCC-CCCCCCcccEEEccCCcCCCCCC---------------
Q 040702 255 ALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPS-TLWNLKDILHLNLSSNFFTGPLP--------------- 318 (797)
Q Consensus 255 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~~~--------------- 318 (797)
+|++|+|++|+++++.|..|.++++|+.|++++|.++.++. .+..+++|+.|++++|.+++...
T Consensus 315 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~ 394 (844)
T 3j0a_A 315 NLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLV 394 (844)
T ss_dssp SCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCC
T ss_pred CCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcc
Confidence 88888888888887778888888888888888888877765 56678888888888887764211
Q ss_pred -------------------------ccccccccccEEeccCcccccccCc-cccCCcccceecccCcccc-----CCCCh
Q 040702 319 -------------------------LKIGNLNVLVQLDLSMNNFSCVIPT-KIGGLKDLQYLFLEYNRLQ-----GSIPN 367 (797)
Q Consensus 319 -------------------------~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~p~ 367 (797)
..+..+++|+.|++++|++++..+. .+..+++|+.|+|++|.++ +..+.
T Consensus 395 ~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~ 474 (844)
T 3j0a_A 395 TLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWD 474 (844)
T ss_dssp CCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSS
T ss_pred cccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchh
Confidence 0122456667777777777654332 3455677778888888776 34456
Q ss_pred hhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCcccCCCCCCCCCCCcccccCCcccc
Q 040702 368 SIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGEIPREGPFRNLSAESFKGNELLC 434 (797)
Q Consensus 368 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c 434 (797)
.|..+++|+.|+|++|++++.+|..|..+++|+.|++++|++++.+|.... ..++.+++++|....
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~ 540 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLA 540 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCC
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCC
Confidence 688899999999999999999999999999999999999999988776544 788889999887654
No 30
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.2e-43 Score=414.72 Aligned_cols=422 Identities=20% Similarity=0.212 Sum_probs=323.8
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
|||++|.|+++.+.+|..+++|++|||++|+++++. |..|.++++|++|+|++|+|+++.+.+|.++++|++
T Consensus 57 LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~--------~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~ 128 (635)
T 4g8a_A 57 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIE--------DGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 128 (635)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEEC--------TTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCE
T ss_pred EEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcC--------hhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCE
Confidence 688888888888888888888888888888855432 235788888888888888888888888888888888
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCcccccc-CCchhhCCCCCCEEEccCCcCcccCCccccCCCCCC----eee
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGT-IPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLK----WLG 156 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~----~L~ 156 (797)
|+|++|+|+ .+|...|.++++|++|+|++|.++.. .|..+..+++|++|+|++|+|+++.+..|..+++++ .++
T Consensus 129 L~Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ 207 (635)
T 4g8a_A 129 LVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLD 207 (635)
T ss_dssp EECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEE
T ss_pred EECCCCcCC-CCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhh
Confidence 888888887 77777788888888888888888753 567788888888888888888888888887766554 566
Q ss_pred ccCccCcCCCCCcccc----------------------------------------------------------------
Q 040702 157 LNDNYLTSSTPELSSL---------------------------------------------------------------- 172 (797)
Q Consensus 157 L~~N~l~~~~~~~~~~---------------------------------------------------------------- 172 (797)
++.|.++.+++.....
T Consensus 208 ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~ 287 (635)
T 4g8a_A 208 LSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFR 287 (635)
T ss_dssp CTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEE
T ss_pred cccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhh
Confidence 7777766554431100
Q ss_pred ------------ccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhh----------------
Q 040702 173 ------------SSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEI---------------- 224 (797)
Q Consensus 173 ------------~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~---------------- 224 (797)
..+..+.+++.+++.+|.+..+. .+.... .++.|++.+|.+.+..+..+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~-~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~ 364 (635)
T 4g8a_A 288 LAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNF-GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNA 364 (635)
T ss_dssp EECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCC-CCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCB
T ss_pred hhhhcccccchhhhhhhhccccccccccccccccc--ccccch-hhhhhhcccccccCcCcccchhhhhcccccccCCCC
Confidence 00111112222222222222111 112222 45666666666554333222
Q ss_pred ---hhhhhhHhhhcccccccccC--CCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCC-C-CCC
Q 040702 225 ---NNLTNLILQLLSLEGNQLEG--SIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSI-P-STL 297 (797)
Q Consensus 225 ---~~l~~L~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l-p-~~~ 297 (797)
..+++| +.|++++|.+.. ..+..+..+.+|+.|+++.|.+... +..+..+++|+.+++++|..... + ..+
T Consensus 365 ~~~~~l~~L--~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~-~~~~~~l~~L~~l~l~~~~~~~~~~~~~~ 441 (635)
T 4g8a_A 365 FSEVDLPSL--EFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVF 441 (635)
T ss_dssp CCCCBCTTC--CEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEE-CSCCTTCTTCCEEECTTSEEESTTSSCTT
T ss_pred ccccccccc--ccchhhccccccccccccchhhhhhhhhhhccccccccc-cccccccccccchhhhhcccccccccccc
Confidence 234555 778888887753 3456667777888888888877653 55678899999999998888444 3 356
Q ss_pred CCCCcccEEEccCCcCCCCCCccccccccccEEeccCccc-ccccCccccCCcccceecccCccccCCCChhhhccccCC
Q 040702 298 WNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNF-SCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLK 376 (797)
Q Consensus 298 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 376 (797)
..+++++.++++.|.+.+..+..+..++.|+.|++++|.+ ....|..|..+++|++|+|++|++++..|..|.++++|+
T Consensus 442 ~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~ 521 (635)
T 4g8a_A 442 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 521 (635)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCC
Confidence 7799999999999999999999999999999999999975 456789999999999999999999999999999999999
Q ss_pred eeeecCCcCCCCCChhhhccCCCCeEEccCCcCcccCCCC-CCC-CCCCcccccCCccccCCCC
Q 040702 377 SLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGEIPRE-GPF-RNLSAESFKGNELLCGMPN 438 (797)
Q Consensus 377 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~-~~l~~~~~~~n~~~c~~~~ 438 (797)
+|+|++|+|++..|..|.++++|+.|++++|++++.+|.. ..+ ..++.+++++|||.|+|..
T Consensus 522 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 522 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp EEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred EEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 9999999999999999999999999999999999998875 344 6799999999999999874
No 31
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.1e-43 Score=399.92 Aligned_cols=374 Identities=19% Similarity=0.214 Sum_probs=269.7
Q ss_pred CEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCC
Q 040702 24 QTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPN 103 (797)
Q Consensus 24 ~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 103 (797)
+.++.+++. ++.+|. +. ++|++|+|++|+++++.|..|.++++|++|+|++|.+.+.++...|.++++
T Consensus 13 ~~~~c~~~~---------l~~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~ 80 (455)
T 3v47_A 13 YNAICINRG---------LHQVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSS 80 (455)
T ss_dssp TEEECCSSC---------CSSCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTT
T ss_pred cccCcCCCC---------cccCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECccccccccc
Confidence 457777776 445555 32 678888888888888888888888888888888888876777777788888
Q ss_pred ccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCc--cccCCCCCCeeeccCccCcCCCCCccccccCCCCCCC
Q 040702 104 LKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPN--TFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYL 181 (797)
Q Consensus 104 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L 181 (797)
|++|+|++|++++..|..|.++++|++|+|++|++++..+. .|.++++|++|+|++|.++.+.+.- .+.++++|
T Consensus 81 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~----~~~~l~~L 156 (455)
T 3v47_A 81 LIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS----FFLNMRRF 156 (455)
T ss_dssp CCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCG----GGGGCTTC
T ss_pred CCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccc----ccCCCCcc
Confidence 88888888888877788888888888888888888864433 4888888888888888888775531 16677888
Q ss_pred cEEEccCCCCCCCCChhhhccc-cCCcEEEccCCcccccCChhhh--------hhhhhHhhhcccccccccCCCchhhcC
Q 040702 182 EYFSFSNNPLGGILPRAIGNLS-QSMEDFWMDNCNISGSIPEEIN--------NLTNLILQLLSLEGNQLEGSIPDDLCR 252 (797)
Q Consensus 182 ~~L~Ls~N~l~~~~~~~~~~l~-~~L~~L~L~~n~i~~~~p~~~~--------~l~~L~L~~L~Ls~N~l~~~~~~~~~~ 252 (797)
++|++++|++.+..+..+..+. .+++.|++++|.+.+..+..++ .+++| ++|++++|++.+..|..+..
T Consensus 157 ~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L--~~L~Ls~n~l~~~~~~~~~~ 234 (455)
T 3v47_A 157 HVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSI--TTLDLSGNGFKESMAKRFFD 234 (455)
T ss_dssp CEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEE--EEEECTTSCCCHHHHHHHHH
T ss_pred cEEeCCCCcccccChhhhhccccccccccccccCcccccchhhcccccccccccccee--eeEecCCCcccccchhhhhc
Confidence 8888888888888887777652 2688888888888765554432 34455 78888888887777776655
Q ss_pred C---CCCcEEEccCCcCccc----------CCCCccC--CccccccccCCCCCCCC-CCCCCCCCcccEEEccCCcCCCC
Q 040702 253 L---AALFQLDLGGNKLSGF----------VPACSGN--LTNLRKLYLGSNLLTSI-PSTLWNLKDILHLNLSSNFFTGP 316 (797)
Q Consensus 253 l---~~L~~L~Ls~N~l~~~----------~~~~~~~--l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~l~~N~l~~~ 316 (797)
. ++|+.|++++|.+.+. .+..+.. .++|+.|++++|.++.+ |..+..+++|++|++++|.+++.
T Consensus 235 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 314 (455)
T 3v47_A 235 AIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKI 314 (455)
T ss_dssp HTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEE
T ss_pred cccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCccccc
Confidence 4 7788888887765432 1122222 24677777777777544 44566667777777777777766
Q ss_pred CCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhcc
Q 040702 317 LPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKL 396 (797)
Q Consensus 317 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 396 (797)
.|..|.++++|+.|++++|.+++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+
T Consensus 315 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 394 (455)
T 3v47_A 315 DDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRL 394 (455)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred ChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccC
Confidence 66667777777777777777766666667777777777777777776666677777777777777777776666666677
Q ss_pred CCCCeEEccCCcCcccCCC
Q 040702 397 LDLKDINVSFNRLEGEIPR 415 (797)
Q Consensus 397 ~~L~~L~l~~N~l~~~~p~ 415 (797)
++|+.|++++|+++|.+|.
T Consensus 395 ~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 395 TSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp TTCCEEECCSSCBCCCTTT
T ss_pred CcccEEEccCCCcccCCCc
Confidence 7777777777777766653
No 32
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.3e-45 Score=374.88 Aligned_cols=225 Identities=21% Similarity=0.300 Sum_probs=179.4
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
++|+..+.||+|+||+||++ ++.||||++++.. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999985 6899999997653 233467899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
||+ +|+|.+++...+ .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~- 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence 999 679999997765 4999999999999999999999 9999999999999999999999999999998654322
Q ss_pred cccccccccCcccccccccccCcc-chHHHHHHHhhhhhhhhccccccchhh----------------hhhhcccccchh
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEM-RLKCWVNDSLLISVMIVVDANLLIREE----------------KHLMTKEQPMVR 726 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~ 726 (797)
.....+||+.|||||.+.+..| +.++|+||+|+..++++.+..++.... ....+..+++++
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 244 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIK 244 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 3345789999999999988776 589999999999877776655543311 122345678999
Q ss_pred ccccCCCCCCCChHHHHH
Q 040702 727 MGTDLSLGQFPASYSISK 744 (797)
Q Consensus 727 ~cl~~dp~~RPs~~~i~~ 744 (797)
.|++.||++|||+.|+++
T Consensus 245 ~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 245 RMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHSCSSGGGSCCHHHHHH
T ss_pred HHccCChhHCcCHHHHHc
Confidence 999999999999998875
No 33
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.5e-45 Score=392.21 Aligned_cols=249 Identities=20% Similarity=0.270 Sum_probs=206.0
Q ss_pred ccCHHHHHHHhcCCCccccccccCCcceeec----------ceEEEEEEEEeccC-CcchhHHHHHHHhhhccC-CceeE
Q 040702 501 RFTYLELFQATNRFSENNLIGRGGFGPVYKD----------GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRH-RNLIK 568 (797)
Q Consensus 501 ~~~~~~l~~~~~~f~~~~~lg~G~~g~Vyk~----------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H-pniv~ 568 (797)
.++..++....++|+..+.||+|+||+||+| ++.||||+++.... ...++|.+|++++++++| ||||+
T Consensus 53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence 4555666666789999999999999999985 26799999975533 234679999999999965 99999
Q ss_pred eeeeeecC-CeEEEEEEccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEc
Q 040702 569 IISSCSND-DFKALVLEYMPLGSLEKCLYSGN---------------YILDIFQGLNIMIDVASALEYLHFGYSVPIIHC 632 (797)
Q Consensus 569 l~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHr 632 (797)
++|+|.++ +..|+|||||++|+|.++++... ..+++.++..|+.|||+||+||| +++||||
T Consensus 133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHR 209 (353)
T 4ase_A 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR 209 (353)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecC
Confidence 99999764 57899999999999999997532 24899999999999999999999 9999999
Q ss_pred CCCCCceEEcCCCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccc
Q 040702 633 DLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLI 711 (797)
Q Consensus 633 Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~ 711 (797)
||||+|||+++++.+||+|||+|+....+.........+||+.|||||.+.++.|+.++||||+|+..++.+. +..++.
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999997755544444556789999999999999999999999999999866653 333322
Q ss_pred hh------------------hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 712 RE------------------EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 712 ~~------------------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
.. +....+.+.+++..||+.||++|||+.|+++.|+.+.+.
T Consensus 290 ~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 290 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp TCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 21 111233567889999999999999999999999887554
No 34
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.4e-44 Score=412.53 Aligned_cols=391 Identities=20% Similarity=0.188 Sum_probs=323.2
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCccccc-CCccccCCCCCC
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGV-VPTTIFNVSTLK 80 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~-~p~~~~~l~~L~ 80 (797)
++|++|.+++..+.+|+.+++|++|||++|++++.. |..++++++|++|++++|+++++ .|..|.++++|+
T Consensus 55 L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~--------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 126 (549)
T 2z81_A 55 LILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLS--------SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ 126 (549)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCC--------HHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCC
T ss_pred EECCCCCcCccChhhccccccCCEEECCCCccCccC--------HHHhccCCCCcEEECCCCcccccchhhhhhccCCcc
Confidence 689999999999999999999999999999965432 23488999999999999999974 578899999999
Q ss_pred EEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCc
Q 040702 81 SLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDN 160 (797)
Q Consensus 81 ~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N 160 (797)
+|+|++|.+.+.+|...|.++++|++|+|++|++++..|..+..+++|++|+++.|.+..+.+..+..+++|++|+|++|
T Consensus 127 ~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 206 (549)
T 2z81_A 127 TLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT 206 (549)
T ss_dssp EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESC
T ss_pred EEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCC
Confidence 99999999555888888889999999999999999999999999999999999999998666556678999999999999
Q ss_pred cCcCCCCCccccccCCCC----------------------------CCCcEEEccCCCCCCC------------------
Q 040702 161 YLTSSTPELSSLSSLSNC----------------------------KYLEYFSFSNNPLGGI------------------ 194 (797)
Q Consensus 161 ~l~~~~~~~~~~~~l~~l----------------------------~~L~~L~Ls~N~l~~~------------------ 194 (797)
+++..+.... .....+ ++|+.|++++|.+.+.
T Consensus 207 ~l~~~~~~~~--~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~ 284 (549)
T 2z81_A 207 NLARFQFSPL--PVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVE 284 (549)
T ss_dssp BCTTCCCCCC--SSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCC
T ss_pred cccccccccc--chhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccc
Confidence 9988631100 011222 3333333333333221
Q ss_pred -----------------CChhhhccccCCcEEEccCCcccccCChhh-hhhhhhHhhhcccccccccCCCch---hhcCC
Q 040702 195 -----------------LPRAIGNLSQSMEDFWMDNCNISGSIPEEI-NNLTNLILQLLSLEGNQLEGSIPD---DLCRL 253 (797)
Q Consensus 195 -----------------~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~-~~l~~L~L~~L~Ls~N~l~~~~~~---~~~~l 253 (797)
.+..+... .+++.|++++|.+. .+|..+ ..+++| ++|++++|++.+..|. .+..+
T Consensus 285 ~L~l~~~~i~~~~~~~~l~~~~~~~-~~L~~L~l~~n~l~-~ip~~~~~~l~~L--~~L~Ls~N~l~~~~~~~~~~~~~l 360 (549)
T 2z81_A 285 TVTIRRLHIPQFYLFYDLSTVYSLL-EKVKRITVENSKVF-LVPCSFSQHLKSL--EFLDLSENLMVEEYLKNSACKGAW 360 (549)
T ss_dssp EEEEESCBCSCGGGSCCCCHHHHHS-TTCCEEEEESSCCC-CCCHHHHHHCTTC--CEEECCSSCCCHHHHHHHTCTTSS
T ss_pred cccccccccchhhhcccchhhhhhc-ccceEEEeccCccc-cCCHHHHhcCccc--cEEEccCCccccccccchhhhhcc
Confidence 01112222 37999999999998 566665 678988 9999999999976643 37789
Q ss_pred CCCcEEEccCCcCcccCC--CCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEe
Q 040702 254 AALFQLDLGGNKLSGFVP--ACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLD 331 (797)
Q Consensus 254 ~~L~~L~Ls~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 331 (797)
++|++|+|++|+++++.+ ..+..+++|++|++++|+++.+|..+..+++|+.|++++|.++.. |..+ .++|+.|+
T Consensus 361 ~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~~--~~~L~~L~ 437 (549)
T 2z81_A 361 PSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVV-KTCI--PQTLEVLD 437 (549)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSCC-CTTS--CTTCSEEE
T ss_pred ccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccccccEEECCCCCcccc-cchh--cCCceEEE
Confidence 999999999999987643 458899999999999999999999999999999999999999853 3333 26899999
Q ss_pred ccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCcc
Q 040702 332 LSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEG 411 (797)
Q Consensus 332 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 411 (797)
+++|++++.+ ..+++|++|+|++|+++ .+|. ...+++|++|+|++|++++.+|..+..+++|+.|++++|++.|
T Consensus 438 Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 511 (549)
T 2z81_A 438 VSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 511 (549)
T ss_dssp CCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCC
T ss_pred CCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccC
Confidence 9999998653 57899999999999999 5665 5789999999999999999999999999999999999999998
Q ss_pred cCCC
Q 040702 412 EIPR 415 (797)
Q Consensus 412 ~~p~ 415 (797)
..|.
T Consensus 512 ~~~~ 515 (549)
T 2z81_A 512 SCPR 515 (549)
T ss_dssp CHHH
T ss_pred CCcc
Confidence 8763
No 35
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-44 Score=376.14 Aligned_cols=221 Identities=20% Similarity=0.227 Sum_probs=182.6
Q ss_pred CccccccccCCcceeec-----ceEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeeec----CCeEEEEE
Q 040702 515 SENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCSN----DDFKALVL 583 (797)
Q Consensus 515 ~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~----~~~~~lv~ 583 (797)
+..++||+|+||.||++ +..||||++..... ...+.|.+|++++++++|||||+++++|.+ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56678999999999985 58899999976532 234679999999999999999999999865 34689999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCceEEcC-CCcEEEEeecCCccCCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVP--IIHCDLKPSNVLLDD-NMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~--ivHrDlkp~NIll~~-~~~~kl~DFGla~~~~~ 660 (797)
|||+||+|.+++.... .+++..+..|+.||+.||+||| +++ |+||||||+|||++. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999998754 4899999999999999999999 777 999999999999984 79999999999985422
Q ss_pred cCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh-------------------hhhhhccc
Q 040702 661 EDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE-------------------EKHLMTKE 721 (797)
Q Consensus 661 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~ 721 (797)
......+||+.|||||.+. +.|+.++||||+|+..++++.+..++... +....+.+
T Consensus 185 ----~~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 259 (290)
T 3fpq_A 185 ----SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 259 (290)
T ss_dssp ----TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHH
T ss_pred ----CccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHH
Confidence 1335578999999999775 57999999999999987666655544221 11122356
Q ss_pred ccchhccccCCCCCCCChHHHHH
Q 040702 722 QPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 722 ~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
+++++.||+.||++|||+.|+++
T Consensus 260 ~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 260 KEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHccCChhHCcCHHHHhc
Confidence 78999999999999999888753
No 36
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.1e-44 Score=380.47 Aligned_cols=238 Identities=22% Similarity=0.235 Sum_probs=183.8
Q ss_pred cCCCccccccccCCcceeec---ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCC----eEEEEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDD----FKALVLE 584 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~----~~~lv~e 584 (797)
++|...+.||+|+||+||+| |+.||||+++..... ...+..|+..+.+++|||||+++|+|.+++ ..|+|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 46778899999999999996 689999998654321 122344666667889999999999998654 5799999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHcc-----CCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFG-----YSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~-----~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
||++|+|.++++... ++|..+.+++.|+++||+|||+. +.++|+||||||+|||+|.++++||+|||+|+...
T Consensus 82 y~~~gsL~~~l~~~~--l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 82 YHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCCCcHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 999999999998764 89999999999999999999932 12399999999999999999999999999998654
Q ss_pred ccCcc--ccccccccCcccccccccccC------ccchHHHHHHHhhhhhhhhccccccch-------------------
Q 040702 660 EEDQS--LTQTQTLATIGYMAPDEIFSG------EMRLKCWVNDSLLISVMIVVDANLLIR------------------- 712 (797)
Q Consensus 660 ~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~dv~s~~~~~~~~~~~~~~~~~------------------- 712 (797)
..... ......+||+.|||||.+.+. .++.++||||+|+..++.+....+++.
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 33221 123456899999999988653 578899999999988665543221100
Q ss_pred --------------h-----hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 713 --------------E-----EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 713 --------------~-----~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
. ..+....+.++++.||+.||++|||+.|+++.|+++.+.
T Consensus 240 ~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 240 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 0 001122456789999999999999999999999887653
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.2e-43 Score=402.92 Aligned_cols=412 Identities=19% Similarity=0.195 Sum_probs=292.5
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+|+++|.+++ +|..+. ++|++|||++|++++.. |..+.++++|++|++++|+|+++.|.+|.++++|++
T Consensus 36 l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~--------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 104 (562)
T 3a79_B 36 VDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELR--------MPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEY 104 (562)
T ss_dssp EECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCC--------GGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCE
T ss_pred EEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccC--------hhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCE
Confidence 5778888886 554443 78888888888854332 246778888888888888888888888888888888
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCcccccc-CCchhhCCCCCCEEEccCCcCcccCCccccCCCCC--Ceeecc
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGT-IPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNL--KWLGLN 158 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L--~~L~L~ 158 (797)
|+|++|+|+ .+|.. .+++|++|+|++|++++. .|..|.++++|++|+|++|+|+.. .|.++++| ++|+|+
T Consensus 105 L~Ls~N~l~-~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~ 177 (562)
T 3a79_B 105 LDVSHNRLQ-NISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLD 177 (562)
T ss_dssp EECTTSCCC-EECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEE
T ss_pred EECCCCcCC-ccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEee
Confidence 888888887 77766 678888888888888763 357888888888888888888753 45555555 888888
Q ss_pred CccC--cCCCCC-ccccc--------------------cCCCCCCCcEEEccCCCCCC----CCChhhhccccCCcEEEc
Q 040702 159 DNYL--TSSTPE-LSSLS--------------------SLSNCKYLEYFSFSNNPLGG----ILPRAIGNLSQSMEDFWM 211 (797)
Q Consensus 159 ~N~l--~~~~~~-~~~~~--------------------~l~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~~L~~L~L 211 (797)
+|.+ +...+. +..+. .+..+++|+.|++++|+... .....+..++ .++.|++
T Consensus 178 ~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~-~L~~L~L 256 (562)
T 3a79_B 178 LVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGP-TLLNVTL 256 (562)
T ss_dssp ESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCS-SCEEEEE
T ss_pred cccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccC-cceEEEe
Confidence 8888 544332 11111 12234455555555553110 0011122222 2333333
Q ss_pred cCCcccccCChhhh---hhhhhHhhhcccccccccCCCchhh----------------------------cC---CCCCc
Q 040702 212 DNCNISGSIPEEIN---NLTNLILQLLSLEGNQLEGSIPDDL----------------------------CR---LAALF 257 (797)
Q Consensus 212 ~~n~i~~~~p~~~~---~l~~L~L~~L~Ls~N~l~~~~~~~~----------------------------~~---l~~L~ 257 (797)
.++.+.+.....+. ...+| ++|++++|.+.+.+|..+ .. ..+|+
T Consensus 257 ~~~~l~~~~~~~~~~~~~~~~L--~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~ 334 (562)
T 3a79_B 257 QHIETTWKCSVKLFQFFWPRPV--EYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIK 334 (562)
T ss_dssp EEEEECHHHHHHHHHHHTTSSE--EEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCS
T ss_pred cCCcCcHHHHHHHHHhhhcccc--cEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcce
Confidence 33222211110000 01122 555555555554444433 11 14588
Q ss_pred EEEccCCcCcccCCCCccCCccccccccCCCCCCC-CCCCCCCCCcccEEEccCCcCCCCC--CccccccccccEEeccC
Q 040702 258 QLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTS-IPSTLWNLKDILHLNLSSNFFTGPL--PLKIGNLNVLVQLDLSM 334 (797)
Q Consensus 258 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-lp~~~~~l~~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L~Ls~ 334 (797)
.|++++|.+.... .+..+++|++|++++|.++. +|..+..+++|+.|++++|++++.. |..|..+++|+.|++++
T Consensus 335 ~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~ 412 (562)
T 3a79_B 335 MLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSL 412 (562)
T ss_dssp EEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTT
T ss_pred EEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCC
Confidence 8888888876432 23788999999999999966 6788999999999999999999743 46689999999999999
Q ss_pred ccccc-ccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCcccC
Q 040702 335 NNFSC-VIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGEI 413 (797)
Q Consensus 335 N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 413 (797)
|.+++ ..+..+..+++|++|++++|++++..|..+. ++|++|+|++|+++ .+|..+..+++|+.|++++|+++..+
T Consensus 413 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~ 489 (562)
T 3a79_B 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVP 489 (562)
T ss_dssp SCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCC
T ss_pred CcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCC
Confidence 99998 5555688999999999999999877666554 78999999999998 66776779999999999999999766
Q ss_pred CC-CCCCCCCCcccccCCccccCCCCc
Q 040702 414 PR-EGPFRNLSAESFKGNELLCGMPNL 439 (797)
Q Consensus 414 p~-~~~~~~l~~~~~~~n~~~c~~~~~ 439 (797)
+. ...+..++.+++.+|++.|+|+..
T Consensus 490 ~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 490 DGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp TTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred HHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 65 567888999999999999988743
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.6e-42 Score=397.04 Aligned_cols=387 Identities=20% Similarity=0.204 Sum_probs=304.0
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+||++|.|+++.+.+|..+++|++|||++|++++.. |+.+..+++|++|++++|+|+.+ |.. .+++|++
T Consensus 57 L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--------~~~~~~l~~L~~L~Ls~N~l~~l-p~~--~l~~L~~ 125 (562)
T 3a79_B 57 LSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLD--------FHVFLFNQDLEYLDVSHNRLQNI-SCC--PMASLRH 125 (562)
T ss_dssp EECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEEC--------TTTTTTCTTCCEEECTTSCCCEE-CSC--CCTTCSE
T ss_pred EECCCCCccccChhhhccCCCccEEECCCCCCCcCC--------HHHhCCCCCCCEEECCCCcCCcc-Ccc--ccccCCE
Confidence 689999999999999999999999999999966543 45688999999999999999964 544 8999999
Q ss_pred EEccCCcCcccCCC-ccccCCCCccEEEccCccccccCCchhhCCCCC--CEEEccCCcC--cccCCccccCC-------
Q 040702 82 LYLHSNSLSGRLPS-SADVRLPNLKELHLWGNNFIGTIPSFIFNASKL--SELGLQKNSF--SGSIPNTFGNL------- 149 (797)
Q Consensus 82 L~Ls~N~l~~~l~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~~f~~l------- 149 (797)
|+|++|+++ .+|. ..|.++++|++|+|++|++++. .+..+++| ++|+|++|++ ++..|..|.++
T Consensus 126 L~Ls~N~l~-~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l 201 (562)
T 3a79_B 126 LDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHL 201 (562)
T ss_dssp EECCSSCCS-BCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEE
T ss_pred EECCCCCcc-ccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEE
Confidence 999999998 6553 5678999999999999999863 45556666 9999999999 77888777664
Q ss_pred -------------------CCCCeeeccCccCc--CCCCCccccccCCCC---------------------------CCC
Q 040702 150 -------------------RNLKWLGLNDNYLT--SSTPELSSLSSLSNC---------------------------KYL 181 (797)
Q Consensus 150 -------------------~~L~~L~L~~N~l~--~~~~~~~~~~~l~~l---------------------------~~L 181 (797)
++|+.|++++|... .++.. ...+..+ ++|
T Consensus 202 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~---~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L 278 (562)
T 3a79_B 202 VFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF---LSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPV 278 (562)
T ss_dssp EECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH---HHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSE
T ss_pred EecCccchhhhhhhcccccceEEEecccccccccchHHHH---HHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccc
Confidence 46777777776411 00000 0012222 256
Q ss_pred cEEEccCCCCCCCCChhh-----hccccCCcEEEccCCcccccCC-hhhhhh-hhhHhhhcccccccccCCCchhhcCCC
Q 040702 182 EYFSFSNNPLGGILPRAI-----GNLSQSMEDFWMDNCNISGSIP-EEINNL-TNLILQLLSLEGNQLEGSIPDDLCRLA 254 (797)
Q Consensus 182 ~~L~Ls~N~l~~~~~~~~-----~~l~~~L~~L~L~~n~i~~~~p-~~~~~l-~~L~L~~L~Ls~N~l~~~~~~~~~~l~ 254 (797)
++|++++|++.+.+|..+ ..+. .|+.+++..|.+ .+| ..+..+ ++..+++|++++|.+.... ....++
T Consensus 279 ~~L~l~~n~l~~~ip~~~~~~~~~~L~-~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~ 353 (562)
T 3a79_B 279 EYLNIYNLTITERIDREEFTYSETALK-SLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPS 353 (562)
T ss_dssp EEEEEEEEEECSCCCCCCCCCCSCSCC-EEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCC
T ss_pred cEEEEeccEeeccccchhhhcccccch-heehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCC
Confidence 666777776665555554 3333 444455555555 233 333332 2222489999999986432 126789
Q ss_pred CCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCC---CCCCCCCcccEEEccCCcCCC-CCCccccccccccEE
Q 040702 255 ALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIP---STLWNLKDILHLNLSSNFFTG-PLPLKIGNLNVLVQL 330 (797)
Q Consensus 255 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp---~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L 330 (797)
+|++|++++|++++..|..+.++++|+.|+|++|+++.++ ..+..+++|+.|++++|.+++ ..+..+..+++|++|
T Consensus 354 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L 433 (562)
T 3a79_B 354 SFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVL 433 (562)
T ss_dssp CCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEE
T ss_pred CceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEE
Confidence 9999999999999989999999999999999999998765 468889999999999999998 445568899999999
Q ss_pred eccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCc
Q 040702 331 DLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLE 410 (797)
Q Consensus 331 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 410 (797)
++++|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|++|+|++|++++..+..+..+++|+.|++++|++.
T Consensus 434 ~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 510 (562)
T 3a79_B 434 NLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWD 510 (562)
T ss_dssp ECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBC
T ss_pred ECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcC
Confidence 9999999877766554 79999999999999 67777779999999999999999554445999999999999999999
Q ss_pred ccCC
Q 040702 411 GEIP 414 (797)
Q Consensus 411 ~~~p 414 (797)
|..+
T Consensus 511 c~c~ 514 (562)
T 3a79_B 511 CTCP 514 (562)
T ss_dssp CCHH
T ss_pred CCcc
Confidence 8765
No 39
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.3e-43 Score=402.09 Aligned_cols=388 Identities=21% Similarity=0.241 Sum_probs=319.6
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+||++|.|++..+..|..+++|++|||++|++++.. |..++++++|++|++++|+|+++ |.. .+++|++
T Consensus 26 L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~--------~~~~~~l~~L~~L~Ls~N~l~~l-p~~--~l~~L~~ 94 (520)
T 2z7x_B 26 LNISQNYISELWTSDILSLSKLRILIISHNRIQYLD--------ISVFKFNQELEYLDLSHNKLVKI-SCH--PTVNLKH 94 (520)
T ss_dssp EECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEE--------GGGGTTCTTCCEEECCSSCCCEE-ECC--CCCCCSE
T ss_pred EECCCCcccccChhhccccccccEEecCCCccCCcC--------hHHhhcccCCCEEecCCCceeec-Ccc--ccCCccE
Confidence 689999999999999999999999999999965433 56788999999999999999964 544 8999999
Q ss_pred EEccCCcCcc-cCCCccccCCCCccEEEccCccccccCCchhhCCCCC--CEEEccCCcC--cccCCccccC--------
Q 040702 82 LYLHSNSLSG-RLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKL--SELGLQKNSF--SGSIPNTFGN-------- 148 (797)
Q Consensus 82 L~Ls~N~l~~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~~f~~-------- 148 (797)
|+|++|++++ .+|. .|..+++|++|+|++|++++ ..|..+++| ++|+|++|++ .+..|..|..
T Consensus 95 L~L~~N~l~~~~~p~-~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l 170 (520)
T 2z7x_B 95 LDLSFNAFDALPICK-EFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHI 170 (520)
T ss_dssp EECCSSCCSSCCCCG-GGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEE
T ss_pred EeccCCccccccchh-hhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEE
Confidence 9999999984 2444 45789999999999999986 467778888 9999999999 6666665555
Q ss_pred ------------------CCCCCeeeccCcc-------CcCCCCCccccccCC---------------------CCCCCc
Q 040702 149 ------------------LRNLKWLGLNDNY-------LTSSTPELSSLSSLS---------------------NCKYLE 182 (797)
Q Consensus 149 ------------------l~~L~~L~L~~N~-------l~~~~~~~~~~~~l~---------------------~l~~L~ 182 (797)
+++|+.|++++|. +....+.+..+..+. ..++|+
T Consensus 171 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~ 250 (520)
T 2z7x_B 171 VFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVW 250 (520)
T ss_dssp ECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCS
T ss_pred EeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCccc
Confidence 6677777777775 221111111111111 134799
Q ss_pred EEEccCCCCCCCCChhh-----hccccCCcEEEccCCcccccCC-hhhhhh---hhhHhhhcccccccccCCCchhhcCC
Q 040702 183 YFSFSNNPLGGILPRAI-----GNLSQSMEDFWMDNCNISGSIP-EEINNL---TNLILQLLSLEGNQLEGSIPDDLCRL 253 (797)
Q Consensus 183 ~L~Ls~N~l~~~~~~~~-----~~l~~~L~~L~L~~n~i~~~~p-~~~~~l---~~L~L~~L~Ls~N~l~~~~~~~~~~l 253 (797)
+|++++|++.+..|..+ ..++ +|+.+++++|.+ .+| ..+..+ .+| +.|++++|.+.... .+..+
T Consensus 251 ~L~l~~n~l~~~~p~~~~~~~~~~l~-~L~~l~l~~n~~--~~p~~~~~~~~~~~~L--~~L~l~~n~l~~~~--~~~~l 323 (520)
T 2z7x_B 251 YFSISNVKLQGQLDFRDFDYSGTSLK-ALSIHQVVSDVF--GFPQSYIYEIFSNMNI--KNFTVSGTRMVHML--CPSKI 323 (520)
T ss_dssp EEEEEEEEEESCCCCCCCCCCSCCCC-EEEEEEEEECCC--CSCTHHHHHHHHTCCC--SEEEEESSCCCCCC--CCSSC
T ss_pred EEEeecccccCccccchhhcccccCc-eeEeccccccce--ecchhhhhcccccCce--eEEEcCCCcccccc--chhhC
Confidence 99999999998888887 7777 899999999999 455 666665 445 99999999987543 12688
Q ss_pred CCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCC---CCCCCCCCcccEEEccCCcCCCCCC-ccccccccccE
Q 040702 254 AALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSI---PSTLWNLKDILHLNLSSNFFTGPLP-LKIGNLNVLVQ 329 (797)
Q Consensus 254 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l---p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~ 329 (797)
++|++|++++|++++..|..+..+++|++|++++|.++.+ |..+..+++|+.|++++|.+++..| ..+..+++|+.
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~ 403 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLS 403 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCE
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCE
Confidence 9999999999999998899999999999999999999864 4568889999999999999998455 45889999999
Q ss_pred EeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcC
Q 040702 330 LDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRL 409 (797)
Q Consensus 330 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 409 (797)
|++++|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|++|+|++|++++..+..+..+++|+.|++++|++
T Consensus 404 L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~ 480 (520)
T 2z7x_B 404 LNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPW 480 (520)
T ss_dssp EECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCC
Confidence 99999999887777664 79999999999999 7888888999999999999999955444599999999999999999
Q ss_pred cccCC
Q 040702 410 EGEIP 414 (797)
Q Consensus 410 ~~~~p 414 (797)
+|..+
T Consensus 481 ~c~c~ 485 (520)
T 2z7x_B 481 DCSCP 485 (520)
T ss_dssp CCCHH
T ss_pred cccCC
Confidence 98754
No 40
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=8.5e-42 Score=384.59 Aligned_cols=367 Identities=24% Similarity=0.262 Sum_probs=304.8
Q ss_pred CCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccc-cCCccccCCCCCCE
Q 040702 3 SLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVG-VVPTTIFNVSTLKS 81 (797)
Q Consensus 3 ~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~-~~p~~~~~l~~L~~ 81 (797)
+.+++.++.+ |. -.++|++|||++|++++.. |..++++++|++|++++|++.+ +.|..|.++++|++
T Consensus 16 ~c~~~~l~~l-p~---l~~~l~~L~Ls~n~i~~~~--------~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~ 83 (455)
T 3v47_A 16 ICINRGLHQV-PE---LPAHVNYVDLSLNSIAELN--------ETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLII 83 (455)
T ss_dssp ECCSSCCSSC-CC---CCTTCCEEECCSSCCCEEC--------TTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCE
T ss_pred CcCCCCcccC-CC---CCCccCEEEecCCccCcCC--------hhHhccCccccEEECcCCcccceECcccccccccCCE
Confidence 3455666543 32 3478999999999865433 5568889999999999999874 45678899999999
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCccccccCCch--hhCCCCCCEEEccCCcCcccCCcc-ccCCCCCCeeecc
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSF--IFNASKLSELGLQKNSFSGSIPNT-FGNLRNLKWLGLN 158 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~-f~~l~~L~~L~L~ 158 (797)
|+|++|+++ .++...|.++++|++|+|++|++++..+.. |..+++|++|+|++|+|+++.|.. |.++++|++|+|+
T Consensus 84 L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~ 162 (455)
T 3v47_A 84 LKLDYNQFL-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLT 162 (455)
T ss_dssp EECTTCTTC-EECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECT
T ss_pred EeCCCCccC-ccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCC
Confidence 999999998 554555678999999999999998754443 888999999999999999887776 8899999999999
Q ss_pred CccCcCCCCCccccccCCCC--CCCcEEEccCCCCCCCCChhhh--------ccccCCcEEEccCCcccccCChhhhhh-
Q 040702 159 DNYLTSSTPELSSLSSLSNC--KYLEYFSFSNNPLGGILPRAIG--------NLSQSMEDFWMDNCNISGSIPEEINNL- 227 (797)
Q Consensus 159 ~N~l~~~~~~~~~~~~l~~l--~~L~~L~Ls~N~l~~~~~~~~~--------~l~~~L~~L~L~~n~i~~~~p~~~~~l- 227 (797)
+|.++...+. .+..+ .+|+.|++++|.+....+..+. .++ +|+.|++++|.+.+..|..+...
T Consensus 163 ~n~l~~~~~~-----~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~-~L~~L~Ls~n~l~~~~~~~~~~~~ 236 (455)
T 3v47_A 163 FNKVKSICEE-----DLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNT-SITTLDLSGNGFKESMAKRFFDAI 236 (455)
T ss_dssp TCCBSCCCTT-----TSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTC-EEEEEECTTSCCCHHHHHHHHHHT
T ss_pred CCcccccChh-----hhhccccccccccccccCcccccchhhccccccccccccc-eeeeEecCCCcccccchhhhhccc
Confidence 9999887664 23333 6789999999999877654432 334 79999999999998888888765
Q ss_pred --hhhHhhhcccccccccCC----------CchhhcC--CCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCC
Q 040702 228 --TNLILQLLSLEGNQLEGS----------IPDDLCR--LAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSI 293 (797)
Q Consensus 228 --~~L~L~~L~Ls~N~l~~~----------~~~~~~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 293 (797)
+++ +.|++++|.+.+. .+..+.. .++|+.|++++|.+.+..|..+..+++|++|+|++|.++.+
T Consensus 237 ~~~~L--~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 314 (455)
T 3v47_A 237 AGTKI--QSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKI 314 (455)
T ss_dssp TTCCE--EEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEE
T ss_pred cccce--eeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCccccc
Confidence 555 8889888865432 2223333 36899999999999999999999999999999999999877
Q ss_pred -CCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhcc
Q 040702 294 -PSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDL 372 (797)
Q Consensus 294 -p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 372 (797)
|..+.++++|+.|++++|.+++..|..|..+++|++|++++|++++..|..|.++++|++|+|++|++++..+..|..+
T Consensus 315 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 394 (455)
T 3v47_A 315 DDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRL 394 (455)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred ChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccC
Confidence 4578899999999999999998889999999999999999999999989999999999999999999998777788999
Q ss_pred ccCCeeeecCCcCCCCCC
Q 040702 373 ISLKSLNLSNNNLSGTIP 390 (797)
Q Consensus 373 ~~L~~L~Ls~N~l~~~~p 390 (797)
++|++|++++|++++..|
T Consensus 395 ~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 395 TSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCCEEECCSSCBCCCTT
T ss_pred CcccEEEccCCCcccCCC
Confidence 999999999999998877
No 41
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=9.5e-43 Score=394.96 Aligned_cols=242 Identities=19% Similarity=0.239 Sum_probs=195.1
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHH---HHHhhhccCCceeEeeeeeecCCeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIE---CGMMKRIRHRNLIKIISSCSNDDFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E---~~~l~~l~Hpniv~l~~~~~~~~~~ 579 (797)
.++|+..+.||+|+||+||++ |+.||||++++.. ......+.+| +.+++.++|||||+++++|.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 368999999999999999974 6899999998652 2222334444 5666777899999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
|+|||||+||+|.+++...+ .+++..+..|+.||+.||+||| +++||||||||+|||++.+|++||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999999998755 4899999999999999999999 9999999999999999999999999999998764
Q ss_pred ccCccccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhhhh-------------------hhc
Q 040702 660 EEDQSLTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREEKH-------------------LMT 719 (797)
Q Consensus 660 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~~-------------------~~~ 719 (797)
.. .....+||+.|||||++.. ..|+.++|+||+|++.++++.+..++...... ...
T Consensus 344 ~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~ 419 (689)
T 3v5w_A 344 KK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 419 (689)
T ss_dssp SC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCH
T ss_pred CC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCH
Confidence 32 2345789999999999975 47999999999999998877776665432211 112
Q ss_pred ccccchhccccCCCCCCCChHHHHHhHHHHHHHhccccccccccCCcccccceeeeeeeee
Q 040702 720 KEQPMVRMGTDLSLGQFPASYSISKYLVYIRELERGKVGITSVAAFPIVHHYLYRTVDYTI 780 (797)
Q Consensus 720 ~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 780 (797)
..+++++.|+..||.+|++ .....+.++++|+||+++||+.
T Consensus 420 ~a~dLI~~lL~~dP~~Rl~--------------------~~~~ga~ei~~HpfF~~idW~~ 460 (689)
T 3v5w_A 420 ELRSLLEGLLQRDVNRRLG--------------------CLGRGAQEVKESPFFRSLDWQM 460 (689)
T ss_dssp HHHHHHHHHTCSCGGGCTT--------------------CSSSTHHHHTTSGGGTTCCHHH
T ss_pred HHHHHHHHHccCCHhHCCC--------------------CCCCCHHHHhcCccccCCCHHH
Confidence 3445555555555555554 3344567788999999999974
No 42
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.4e-41 Score=379.70 Aligned_cols=345 Identities=21% Similarity=0.209 Sum_probs=220.0
Q ss_pred EEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCc
Q 040702 81 SLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDN 160 (797)
Q Consensus 81 ~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N 160 (797)
.++.++++++ .+|.... +++++|+|++|+|++..+..|.++++|++|+|++|.|+++.|++|.++++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP---TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCCC---CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 3444444443 4443321 34444444444444444444444444444444444444444444444444444444444
Q ss_pred cCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccc
Q 040702 161 YLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGN 240 (797)
Q Consensus 161 ~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N 240 (797)
.++.+++. .|.++++|++|+|++|++.++.+..|..++ +|+.|++++|.+.+..+..|.++++| ++|++++|
T Consensus 91 ~l~~~~~~-----~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L--~~L~l~~n 162 (477)
T 2id5_A 91 RLKLIPLG-----VFTGLSNLTKLDISENKIVILLDYMFQDLY-NLKSLEVGDNDLVYISHRAFSGLNSL--EQLTLEKC 162 (477)
T ss_dssp CCCSCCTT-----SSTTCTTCCEEECTTSCCCEECTTTTTTCT-TCCEEEECCTTCCEECTTSSTTCTTC--CEEEEESC
T ss_pred cCCccCcc-----cccCCCCCCEEECCCCccccCChhHccccc-cCCEEECCCCccceeChhhccCCCCC--CEEECCCC
Confidence 44444433 144444455555555554444444444444 45555555555555555555555555 66667777
Q ss_pred cccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCC-CCCCCCCCCCCcccEEEccCCcCCCCCCc
Q 040702 241 QLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLL-TSIPSTLWNLKDILHLNLSSNFFTGPLPL 319 (797)
Q Consensus 241 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l-~~lp~~~~~l~~L~~L~l~~N~l~~~~~~ 319 (797)
+++++.+..|..+++|+.|+|++|.+.++.+..|..+++|+.|++++|.+ ..+|.......+|+.|++++|.+++..+.
T Consensus 163 ~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 242 (477)
T 2id5_A 163 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYL 242 (477)
T ss_dssp CCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHH
T ss_pred cCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHH
Confidence 77666666777777888888888888777777777888888888887765 66676666666888888888888866556
Q ss_pred cccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCC
Q 040702 320 KIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDL 399 (797)
Q Consensus 320 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 399 (797)
.|..+++|+.|+|++|.+++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|
T Consensus 243 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 322 (477)
T 2id5_A 243 AVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNL 322 (477)
T ss_dssp HHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGC
T ss_pred HhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCccc
Confidence 77888888888888888887777778888888888888888887778888888888888888888887777777888888
Q ss_pred CeEEccCCcCcccCCCCCCCCCCCcccccCCccccCCC
Q 040702 400 KDINVSFNRLEGEIPREGPFRNLSAESFKGNELLCGMP 437 (797)
Q Consensus 400 ~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~~ 437 (797)
+.|++++|++.|..+....+.......+.++...|..|
T Consensus 323 ~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 323 ETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp CEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred CEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 88888888887664321111222334556677777655
No 43
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.8e-41 Score=366.05 Aligned_cols=190 Identities=21% Similarity=0.265 Sum_probs=160.7
Q ss_pred HhcCCCccccccccCCcceeec--------ceEEEEEEEEeccCCcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD--------GMEVAIKVFNLQYGGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKA 580 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~--------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~ 580 (797)
..++|++.+.||+|+||+||++ ++.||||.+.... ...++.+|+++++.+ +|||||++++++.+.+..|
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 4578999999999999999975 4689999986443 346788999999998 6999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCC-CcEEEEeecCCccCC
Q 040702 581 LVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN-MVAHLSDFGMAKPLL 659 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~-~~~kl~DFGla~~~~ 659 (797)
+||||+++|+|.+++. .+++.+++.++.|++.||+||| +++|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 97 lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 97 IAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 9999999999999984 3889999999999999999999 9999999999999999876 799999999998553
Q ss_pred ccCcc--------------------------ccccccccCcccccccccccC-ccchHHHHHHHhhhhhhhhcccc
Q 040702 660 EEDQS--------------------------LTQTQTLATIGYMAPDEIFSG-EMRLKCWVNDSLLISVMIVVDAN 708 (797)
Q Consensus 660 ~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~s~~~~~~~~~~~~~ 708 (797)
+.... ......+||++|||||++.+. .|+.++|+||+|++.++++.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 22110 112345799999999999875 48999999999999877666543
No 44
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.2e-39 Score=367.87 Aligned_cols=349 Identities=29% Similarity=0.433 Sum_probs=305.0
Q ss_pred CCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCcc
Q 040702 18 GNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSA 97 (797)
Q Consensus 18 ~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~ 97 (797)
..+++++.|++++|.+ ..+| .+..+++|++|++++|+++++.| |.++++|++|+|++|.++ .++.
T Consensus 43 ~~l~~l~~L~l~~~~i---------~~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~-~~~~-- 107 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGI---------KSID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA-DITP-- 107 (466)
T ss_dssp HHHHTCCEEECCSSCC---------CCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCGG--
T ss_pred hHhccccEEecCCCCC---------ccCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccc-cChh--
Confidence 3467899999999984 3455 37889999999999999998755 999999999999999998 5554
Q ss_pred ccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCC
Q 040702 98 DVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSN 177 (797)
Q Consensus 98 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~ 177 (797)
+..+++|++|+|++|++++..+ +.++++|++|+|++|+++++. .+.++++|++|+++ |.+...+ .+.+
T Consensus 108 ~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~~-------~~~~ 175 (466)
T 1o6v_A 108 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDLK-------PLAN 175 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCCG-------GGTT
T ss_pred hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecC-CcccCch-------hhcc
Confidence 6789999999999999986543 899999999999999999753 59999999999996 5555443 3788
Q ss_pred CCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCc
Q 040702 178 CKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALF 257 (797)
Q Consensus 178 l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 257 (797)
+++|+.|++++|++..+ ..+..++ +|+.|++++|.+.+..| ++.+++| ++|++++|++++. ..+..+++|+
T Consensus 176 l~~L~~L~l~~n~l~~~--~~l~~l~-~L~~L~l~~n~l~~~~~--~~~l~~L--~~L~l~~n~l~~~--~~l~~l~~L~ 246 (466)
T 1o6v_A 176 LTTLERLDISSNKVSDI--SVLAKLT-NLESLIATNNQISDITP--LGILTNL--DELSLNGNQLKDI--GTLASLTNLT 246 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCT-TCSEEECCSSCCCCCGG--GGGCTTC--CEEECCSSCCCCC--GGGGGCTTCS
T ss_pred CCCCCEEECcCCcCCCC--hhhccCC-CCCEEEecCCccccccc--ccccCCC--CEEECCCCCcccc--hhhhcCCCCC
Confidence 89999999999999876 3477887 89999999999997665 7778888 9999999999864 4688999999
Q ss_pred EEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCccc
Q 040702 258 QLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNF 337 (797)
Q Consensus 258 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 337 (797)
.|++++|.+++..+ +..+++|+.|++++|.++.++. +..+++|+.|++++|++++..+ +..+++|+.|++++|++
T Consensus 247 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l 321 (466)
T 1o6v_A 247 DLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNI 321 (466)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCC
T ss_pred EEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcC
Confidence 99999999997755 8899999999999999988876 7889999999999999997654 88999999999999999
Q ss_pred ccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCcccC
Q 040702 338 SCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGEI 413 (797)
Q Consensus 338 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 413 (797)
++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++.+
T Consensus 322 ~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~p 391 (466)
T 1o6v_A 322 SDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAP 391 (466)
T ss_dssp SCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECCC
T ss_pred CCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCCc
Confidence 98766 78999999999999999865 478999999999999999998877 899999999999999999754
No 45
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=366.41 Aligned_cols=228 Identities=23% Similarity=0.265 Sum_probs=186.2
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeec------CCe
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSN------DDF 578 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~------~~~ 578 (797)
++|+..+.||+|+||+||++ |+.||||+++..... ..+.+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999985 689999999755322 24578899999999999999999998754 357
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccC
Q 040702 579 KALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 658 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~ 658 (797)
.|+|||||+ |+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 68999997655 5999999999999999999999 999999999999999999999999999999876
Q ss_pred CccCc--cccccccccCcccccccccccC-ccchHHHHHHHhhhhhhhhccccccchhh-h-------------------
Q 040702 659 LEEDQ--SLTQTQTLATIGYMAPDEIFSG-EMRLKCWVNDSLLISVMIVVDANLLIREE-K------------------- 715 (797)
Q Consensus 659 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-~------------------- 715 (797)
..... .......+||+.|||||++.+. .|+.++|+||+|++.++++.+..++.+.. .
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 43221 1234567899999999998875 46899999999999877666655543211 0
Q ss_pred ---------------------------hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 ---------------------------HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 ---------------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.......++++.|+..||++|||+.|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 01223457899999999999999998876
No 46
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=7.3e-39 Score=376.20 Aligned_cols=398 Identities=20% Similarity=0.176 Sum_probs=315.9
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCC-ccccCCCCCCEEEcccCcccccCCccccCCCCCC
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIP-HEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLK 80 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip-~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~ 80 (797)
|||++|.|+++.+.+|.++++|++|||++|+++ .+| ..|.++++|++|+|++|+++++.+..|+++++|+
T Consensus 81 L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~---------~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~ 151 (635)
T 4g8a_A 81 LDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ---------SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 151 (635)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTCCCC---------EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCC
T ss_pred EECCCCcCCCcChhHhcCCCCCCEEEccCCcCC---------CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccC
Confidence 689999999999999999999999999999954 344 3578999999999999999998888999999999
Q ss_pred EEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCC----CEEEccCCcCcccCCccccCCCCCCeee
Q 040702 81 SLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKL----SELGLQKNSFSGSIPNTFGNLRNLKWLG 156 (797)
Q Consensus 81 ~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~~L~L~~N~l~~~~~~~f~~l~~L~~L~ 156 (797)
+|+|++|.+++......+..+++|++|+|++|+|++..+..|..+.++ ..++++.|.++.+.++.+..+ .++.|+
T Consensus 152 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~-~~~~l~ 230 (635)
T 4g8a_A 152 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLT 230 (635)
T ss_dssp EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEE
T ss_pred eeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccch-hhhhhh
Confidence 999999999843234556789999999999999998888888766544 468888888876655444322 222222
Q ss_pred ccCccCc-----------------------------------------------------------CCCCC---------
Q 040702 157 LNDNYLT-----------------------------------------------------------SSTPE--------- 168 (797)
Q Consensus 157 L~~N~l~-----------------------------------------------------------~~~~~--------- 168 (797)
+++|... .....
T Consensus 231 l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 310 (635)
T 4g8a_A 231 LRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSS 310 (635)
T ss_dssp EESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSE
T ss_pred hhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccc
Confidence 2222110 00000
Q ss_pred -------ccccccCCCCCCCcEEEccCCCCCCCCChh-------------------hhccccCCcEEEccCCccc--ccC
Q 040702 169 -------LSSLSSLSNCKYLEYFSFSNNPLGGILPRA-------------------IGNLSQSMEDFWMDNCNIS--GSI 220 (797)
Q Consensus 169 -------~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~-------------------~~~l~~~L~~L~L~~n~i~--~~~ 220 (797)
+.....+.....|+.|++++|.+....+.. +..++ +|+.|++++|.+. +..
T Consensus 311 l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~-~L~~L~ls~n~l~~~~~~ 389 (635)
T 4g8a_A 311 FSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP-SLEFLDLSRNGLSFKGCC 389 (635)
T ss_dssp EEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT-TCCEEECCSSCCBEEEEC
T ss_pred ccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc-ccccchhhcccccccccc
Confidence 000112333445555555555544332222 23455 7999999999986 345
Q ss_pred ChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCC-CCccCCccccccccCCCCCCCC-CCCCC
Q 040702 221 PEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVP-ACSGNLTNLRKLYLGSNLLTSI-PSTLW 298 (797)
Q Consensus 221 p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~l-p~~~~ 298 (797)
+..+..+.+| ++|+++.|.+.. .+..+..+++|+.++++.|......+ ..|..+++++.++++.|.+..+ |..+.
T Consensus 390 ~~~~~~~~~L--~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~ 466 (635)
T 4g8a_A 390 SQSDFGTISL--KYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 466 (635)
T ss_dssp CHHHHSCSCC--CEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred ccchhhhhhh--hhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccc
Confidence 6667777777 999999999885 45678889999999999988765544 5788999999999999999665 45667
Q ss_pred CCCcccEEEccCCcCC-CCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCe
Q 040702 299 NLKDILHLNLSSNFFT-GPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKS 377 (797)
Q Consensus 299 ~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 377 (797)
.+++|+.|++++|.+. +..|..|..+++|+.|+|++|+|+++.|..|.++++|++|+|++|+|++..|..|..+++|++
T Consensus 467 ~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~ 546 (635)
T 4g8a_A 467 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 546 (635)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCE
T ss_pred cchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCE
Confidence 7999999999999854 467888999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcCCCCCChhhhcc-CCCCeEEccCCcCcccC
Q 040702 378 LNLSNNNLSGTIPISLEKL-LDLKDINVSFNRLEGEI 413 (797)
Q Consensus 378 L~Ls~N~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~ 413 (797)
|+|++|+|++..|..+..+ ++|+.|++++|++.|..
T Consensus 547 L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 547 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp EECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred EECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 9999999999999999998 68999999999999864
No 47
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.6e-40 Score=380.38 Aligned_cols=228 Identities=18% Similarity=0.212 Sum_probs=195.2
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
.++|++.+.||+|+||.||++ |+.||||++........+.+.+|+++|+.++|||||++++++.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 368999999999999999974 689999999876544567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCC--CcEEEEeecCCccCCccCc
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN--MVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~--~~~kl~DFGla~~~~~~~~ 663 (797)
|+||+|.+++......+++.++..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 9999999999766667999999999999999999999 9999999999999999854 899999999999764332
Q ss_pred cccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhccccc
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMTKEQP 723 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~ 723 (797)
.....+||+.|||||.+.+..|+.++|+||+|++.++++.+..++.... .......++
T Consensus 312 --~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~d 389 (573)
T 3uto_A 312 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 389 (573)
T ss_dssp --EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHH
T ss_pred --ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence 3345689999999999999999999999999999866665554433211 112335578
Q ss_pred chhccccCCCCCCCChHHHHH
Q 040702 724 MVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 724 l~~~cl~~dp~~RPs~~~i~~ 744 (797)
+++.||..||.+||++.|+++
T Consensus 390 li~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 390 FIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHccCChhHCcCHHHHhc
Confidence 899999999999999888754
No 48
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=5.9e-39 Score=362.06 Aligned_cols=340 Identities=25% Similarity=0.374 Sum_probs=299.3
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
++++++.++.+ + .+..+++|++|||++|++++ +|. +..+++|++|++++|++.++.| +.++++|++
T Consensus 51 L~l~~~~i~~l-~-~~~~l~~L~~L~Ls~n~l~~---------~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 51 LQADRLGIKSI-D-GVEYLNNLTQINFSNNQLTD---------ITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp EECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCC---------CGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred EecCCCCCccC-c-chhhhcCCCEEECCCCccCC---------chh-hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 46788888764 3 48899999999999999553 444 8899999999999999998766 999999999
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCcc
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNY 161 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~ 161 (797)
|+|++|.++ .++. +..+++|++|+|++|.+.+. + .+..+++|++|+++ |.+.+..+ |.++++|++|++++|.
T Consensus 117 L~L~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (466)
T 1o6v_A 117 LTLFNNQIT-DIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNK 188 (466)
T ss_dssp EECCSSCCC-CCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EECCCCCCC-CChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCc
Confidence 999999998 6654 67999999999999999854 3 58999999999997 56665543 9999999999999999
Q ss_pred CcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhccccccc
Q 040702 162 LTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQ 241 (797)
Q Consensus 162 l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~ 241 (797)
++.++ .+..+++|++|++++|++.+..| ++.++ +|+.|++++|.+.+. ..+..+++| ++|++++|.
T Consensus 189 l~~~~-------~l~~l~~L~~L~l~~n~l~~~~~--~~~l~-~L~~L~l~~n~l~~~--~~l~~l~~L--~~L~l~~n~ 254 (466)
T 1o6v_A 189 VSDIS-------VLAKLTNLESLIATNNQISDITP--LGILT-NLDELSLNGNQLKDI--GTLASLTNL--TDLDLANNQ 254 (466)
T ss_dssp CCCCG-------GGGGCTTCSEEECCSSCCCCCGG--GGGCT-TCCEEECCSSCCCCC--GGGGGCTTC--SEEECCSSC
T ss_pred CCCCh-------hhccCCCCCEEEecCCccccccc--ccccC-CCCEEECCCCCcccc--hhhhcCCCC--CEEECCCCc
Confidence 98764 37788999999999999998766 66676 899999999999864 468888888 999999999
Q ss_pred ccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccc
Q 040702 242 LEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKI 321 (797)
Q Consensus 242 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~ 321 (797)
+.+..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.++.++. +..+++|+.|++++|.+++..| +
T Consensus 255 l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~ 327 (466)
T 1o6v_A 255 ISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--V 327 (466)
T ss_dssp CCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG--G
T ss_pred cccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchh--h
Confidence 997655 8899999999999999997655 8899999999999999988876 7789999999999999998766 7
Q ss_pred cccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCC
Q 040702 322 GNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGT 388 (797)
Q Consensus 322 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 388 (797)
..+++|++|++++|.+++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|.+++.
T Consensus 328 ~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 328 SSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp GGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred ccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 8999999999999999976 478999999999999999998777 89999999999999999964
No 49
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.8e-39 Score=361.76 Aligned_cols=364 Identities=25% Similarity=0.321 Sum_probs=228.1
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCC-------------CCEEEcccCccccc
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHN-------------MEWMAFSFNKVVGV 68 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~-------------L~~L~ls~N~i~~~ 68 (797)
+++++|.+ |.+|++++.+++|++|||++|.++|.+ |.+++.+.+ +++|++++|+++++
T Consensus 16 L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~--------p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l 86 (454)
T 1jl5_A 16 PLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNA--------PPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL 86 (454)
T ss_dssp -------------------CCHHHHHHHHHHHHHTS--------CTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC
T ss_pred hhcccCch-hhCChhHhcccchhhhhccCCcccccC--------CcccccchhcchhhhhhhhccCCCEEEecCCccccC
Confidence 67889998 889999999999999999999866554 455555554 48888888888774
Q ss_pred CCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccC
Q 040702 69 VPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGN 148 (797)
Q Consensus 69 ~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~ 148 (797)
|.. .++|++|++++|.++ .+|.. +++|++|++++|++++. |.. .++|++|+|++|+|++ .| .|++
T Consensus 87 -p~~---~~~L~~L~l~~n~l~-~lp~~----~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~ 151 (454)
T 1jl5_A 87 -PEL---PPHLESLVASCNSLT-ELPEL----PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQN 151 (454)
T ss_dssp -CSC---CTTCSEEECCSSCCS-SCCCC----CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTT
T ss_pred -CCC---cCCCCEEEccCCcCC-ccccc----cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCC
Confidence 332 367888888888887 47743 37888888888888743 221 2678888888888886 44 5888
Q ss_pred CCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhh
Q 040702 149 LRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLT 228 (797)
Q Consensus 149 l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~ 228 (797)
+++|++|++++|+++.++.. .++|++|++++|+++++ | .+.+++ +|+.|++++|.+++ +|... +
T Consensus 152 l~~L~~L~l~~N~l~~lp~~---------~~~L~~L~L~~n~l~~l-~-~~~~l~-~L~~L~l~~N~l~~-l~~~~---~ 215 (454)
T 1jl5_A 152 SSFLKIIDVDNNSLKKLPDL---------PPSLEFIAAGNNQLEEL-P-ELQNLP-FLTAIYADNNSLKK-LPDLP---L 215 (454)
T ss_dssp CTTCCEEECCSSCCSCCCCC---------CTTCCEEECCSSCCSSC-C-CCTTCT-TCCEEECCSSCCSS-CCCCC---T
T ss_pred CCCCCEEECCCCcCcccCCC---------cccccEEECcCCcCCcC-c-cccCCC-CCCEEECCCCcCCc-CCCCc---C
Confidence 88888888888888876543 13788888888888864 4 477776 78888888888875 34332 2
Q ss_pred hhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEc
Q 040702 229 NLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNL 308 (797)
Q Consensus 229 ~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l 308 (797)
+| ++|++++|.++ .+| .+..+++|++|++++|+++++ |.. +++|+.|++++|.++.+|.. +++|+.|++
T Consensus 216 ~L--~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~~N~l~~l~~~---~~~L~~L~l 284 (454)
T 1jl5_A 216 SL--ESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTL-PDL---PPSLEALNVRDNYLTDLPEL---PQSLTFLDV 284 (454)
T ss_dssp TC--CEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSC-CSC---CTTCCEEECCSSCCSCCCCC---CTTCCEEEC
T ss_pred cc--cEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcc-ccc---ccccCEEECCCCcccccCcc---cCcCCEEEC
Confidence 44 78888888887 445 377888888888888888764 332 36788888888888777764 367788888
Q ss_pred cCCcCCCCCCccccccccccEEeccCcccccccCccccCC-cccceecccCccccCCCChhhhccccCCeeeecCCcCCC
Q 040702 309 SSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGL-KDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSG 387 (797)
Q Consensus 309 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 387 (797)
++|.+++.. .. .++|+.|++++|++++. + .+ ++|++|++++|++++ +|.. +++|++|++++|++++
T Consensus 285 s~N~l~~l~-~~---~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 285 SENIFSGLS-EL---PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp CSSCCSEES-CC---CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred cCCccCccc-Cc---CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc
Confidence 888877521 11 14677777777777642 2 22 467777777777764 4433 4667777777777763
Q ss_pred CCChhhhccCCCCeEEccCCcCcc--cCCCC-CCC-------------CCCCcccccCCccc
Q 040702 388 TIPISLEKLLDLKDINVSFNRLEG--EIPRE-GPF-------------RNLSAESFKGNELL 433 (797)
Q Consensus 388 ~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~-~~~-------------~~l~~~~~~~n~~~ 433 (797)
+|. .+++|+.|++++|++++ .+|.. ..+ ..++.+++++|++.
T Consensus 352 -lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~ 409 (454)
T 1jl5_A 352 -VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLR 409 (454)
T ss_dssp -CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC-----------------------
T ss_pred -ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCC
Confidence 444 35667777777777776 33332 222 45566666666554
No 50
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.6e-39 Score=363.14 Aligned_cols=347 Identities=20% Similarity=0.184 Sum_probs=239.3
Q ss_pred CEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCC
Q 040702 24 QTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPN 103 (797)
Q Consensus 24 ~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 103 (797)
+.++.++++ ++.+|..+. ++++.|+|++|+|+++.|..|.++++|++|+|++|.++ .++...|.++++
T Consensus 14 ~~v~c~~~~---------l~~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~ 81 (477)
T 2id5_A 14 RAVLCHRKR---------FVAVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVS-AVEPGAFNNLFN 81 (477)
T ss_dssp TEEECCSCC---------CSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCC-EECTTTTTTCTT
T ss_pred CEEEeCCCC---------cCcCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccC-EeChhhhhCCcc
Confidence 567777776 445555553 46788888888888777778888888888888888887 555555667788
Q ss_pred ccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcE
Q 040702 104 LKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEY 183 (797)
Q Consensus 104 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~ 183 (797)
|++|+|++|++++..+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|.++.+.+. .|.++++|+.
T Consensus 82 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~ 156 (477)
T 2id5_A 82 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR-----AFSGLNSLEQ 156 (477)
T ss_dssp CCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT-----SSTTCTTCCE
T ss_pred CCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh-----hccCCCCCCE
Confidence 88888888887766666677778888888888888777777788888888888888877776654 3677777777
Q ss_pred EEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccC
Q 040702 184 FSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGG 263 (797)
Q Consensus 184 L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 263 (797)
|+|++|+++++.+..|.+++ +|+.|++++| .+.++.+..|..+++|+.|++++
T Consensus 157 L~l~~n~l~~~~~~~l~~l~-~L~~L~l~~n--------------------------~i~~~~~~~~~~l~~L~~L~l~~ 209 (477)
T 2id5_A 157 LTLEKCNLTSIPTEALSHLH-GLIVLRLRHL--------------------------NINAIRDYSFKRLYRLKVLEISH 209 (477)
T ss_dssp EEEESCCCSSCCHHHHTTCT-TCCEEEEESC--------------------------CCCEECTTCSCSCTTCCEEEEEC
T ss_pred EECCCCcCcccChhHhcccC-CCcEEeCCCC--------------------------cCcEeChhhcccCcccceeeCCC
Confidence 77777777766666666655 4555544444 44444455566666666677766
Q ss_pred CcCcccCCCCccCCccccccccCCCCCCCCCC-CCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccccC
Q 040702 264 NKLSGFVPACSGNLTNLRKLYLGSNLLTSIPS-TLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIP 342 (797)
Q Consensus 264 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 342 (797)
|...+..|.......+|+.|+|++|.++.+|. .+..+++|+.|++++|.+++..+..|..+++|+.|+|++|++++..|
T Consensus 210 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 289 (477)
T 2id5_A 210 WPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP 289 (477)
T ss_dssp CTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECT
T ss_pred CccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECH
Confidence 66555555444445577777777777776664 45567777777777777776666667777777777777777777777
Q ss_pred ccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCcccCCC
Q 040702 343 TKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGEIPR 415 (797)
Q Consensus 343 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 415 (797)
..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|.+....+ ...-......+++.++...|..|.
T Consensus 290 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~-~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 290 YAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR-LLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp TTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG-GHHHHTTTTSSCCTTCCCBEEESG
T ss_pred HHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccc-hHhHHhhhhccccCccCceeCCch
Confidence 777777777777777777776666667777777788887777764322 111122334455666666665553
No 51
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.9e-38 Score=355.22 Aligned_cols=348 Identities=17% Similarity=0.157 Sum_probs=278.5
Q ss_pred CccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCC
Q 040702 8 FLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSN 87 (797)
Q Consensus 8 ~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N 87 (797)
.+.+..+.+++.+++|++|||++|++++ +| ++..+++|++|++++|+++++ | ++++++|++|+|++|
T Consensus 29 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~---------~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N 95 (457)
T 3bz5_A 29 EMQATDTISEEQLATLTSLDCHNSSITD---------MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSN 95 (457)
T ss_dssp TCCTTSEEEHHHHTTCCEEECCSSCCCC---------CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSS
T ss_pred CcCcccccChhHcCCCCEEEccCCCccc---------Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCC
Confidence 3455566678899999999999999554 44 578899999999999999985 4 899999999999999
Q ss_pred cCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCcc-CcCCC
Q 040702 88 SLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNY-LTSST 166 (797)
Q Consensus 88 ~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~-l~~~~ 166 (797)
.|+ .+| +..+++|++|+|++|++++. | +..+++|++|++++|+|+++ .++++++|++|++++|. +..+
T Consensus 96 ~l~-~~~---~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~- 164 (457)
T 3bz5_A 96 KLT-NLD---VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL- 164 (457)
T ss_dssp CCS-CCC---CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC-
T ss_pred CCc-eee---cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc-
Confidence 998 555 67899999999999999864 4 88999999999999999986 28899999999999994 4443
Q ss_pred CCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCC
Q 040702 167 PELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSI 246 (797)
Q Consensus 167 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~ 246 (797)
.+..+++|+.|++++|+++++. +..++ +|+.|++++|.+++. .++.+++| ++|++++|+++++
T Consensus 165 -------~~~~l~~L~~L~ls~n~l~~l~---l~~l~-~L~~L~l~~N~l~~~---~l~~l~~L--~~L~Ls~N~l~~i- 227 (457)
T 3bz5_A 165 -------DVTPQTQLTTLDCSFNKITELD---VSQNK-LLNRLNCDTNNITKL---DLNQNIQL--TFLDCSSNKLTEI- 227 (457)
T ss_dssp -------CCTTCTTCCEEECCSSCCCCCC---CTTCT-TCCEEECCSSCCSCC---CCTTCTTC--SEEECCSSCCSCC-
T ss_pred -------ccccCCcCCEEECCCCccceec---cccCC-CCCEEECcCCcCCee---ccccCCCC--CEEECcCCccccc-
Confidence 2678899999999999999863 67776 899999999999976 37788888 9999999999974
Q ss_pred chhhcCCCCCcEEEccCCcCcccCCCCccCCc-------cccccccCCCCC-CCCCCCCCCCCcccEEEccCCcCCCCCC
Q 040702 247 PDDLCRLAALFQLDLGGNKLSGFVPACSGNLT-------NLRKLYLGSNLL-TSIPSTLWNLKDILHLNLSSNFFTGPLP 318 (797)
Q Consensus 247 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-------~L~~L~L~~N~l-~~lp~~~~~l~~L~~L~l~~N~l~~~~~ 318 (797)
| +..+++|+.|++++|++++..+..+..++ +|+.|++++|.+ +.+| +..+++|+.|++++|...+.+|
T Consensus 228 p--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 228 D--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLD 303 (457)
T ss_dssp C--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEE
T ss_pred C--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceec
Confidence 4 88899999999999999987665555444 455666666654 4444 3567888889999887665544
Q ss_pred c--------cccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCC
Q 040702 319 L--------KIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIP 390 (797)
Q Consensus 319 ~--------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 390 (797)
. .+.++++|++|++++|++++. + +..+++|+.|++++|++++ ++.|..|++++|.++|.
T Consensus 304 ~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-- 370 (457)
T 3bz5_A 304 CQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-- 370 (457)
T ss_dssp CTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE--
T ss_pred cCCCcceEechhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec--
Confidence 3 245567788888888888764 2 7778888888888888774 24566777888888765
Q ss_pred hhhhccCCCCeEEccCCcCcccCCCC
Q 040702 391 ISLEKLLDLKDINVSFNRLEGEIPRE 416 (797)
Q Consensus 391 ~~~~~l~~L~~L~l~~N~l~~~~p~~ 416 (797)
..+..|+.+++++|+++|.+|..
T Consensus 371 ---~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 371 ---GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp ---EEEEECCCBCCBTTBEEEECCTT
T ss_pred ---ceeeecCccccccCcEEEEcChh
Confidence 35567888899999999888753
No 52
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=7.2e-38 Score=344.97 Aligned_cols=335 Identities=20% Similarity=0.206 Sum_probs=225.2
Q ss_pred CCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEE
Q 040702 52 LHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSEL 131 (797)
Q Consensus 52 l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 131 (797)
++++++|++++|.+..+.+..|.++++|++|+|++|.++ .++...|..+++|++|+|++|++++..|..|.++++|++|
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCccc-ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 345555555555555544444555555555555555554 4444444455555555555555555445555555555555
Q ss_pred EccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEc
Q 040702 132 GLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWM 211 (797)
Q Consensus 132 ~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L 211 (797)
+|++|+|+.+.+..|.++++|++|+|++|.++.+++. .|..+++|++|++++|+++++.
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~---------------- 181 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDD-----TFQATTSLQNLQLSSNRLTHVD---------------- 181 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTT-----TTSSCTTCCEEECCSSCCSBCC----------------
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChh-----hccCCCCCCEEECCCCcCCccc----------------
Confidence 5555555544444455555555555555555554443 2444555555555555554331
Q ss_pred cCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCC
Q 040702 212 DNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLT 291 (797)
Q Consensus 212 ~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 291 (797)
+..+++| +.|++++|.+.+ +....+|++|++++|.+..+.... .++|+.|++++|.++
T Consensus 182 ------------~~~l~~L--~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~n~l~ 239 (390)
T 3o6n_A 182 ------------LSLIPSL--FHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLT 239 (390)
T ss_dssp ------------GGGCTTC--SEEECCSSCCSE-----EECCSSCSEEECCSSCCCEEECCC---CSSCCEEECCSSCCC
T ss_pred ------------ccccccc--ceeecccccccc-----cCCCCcceEEECCCCeeeeccccc---cccccEEECCCCCCc
Confidence 2223333 566666666553 223457888999999888664332 478999999999998
Q ss_pred CCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhc
Q 040702 292 SIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGD 371 (797)
Q Consensus 292 ~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 371 (797)
.+ ..+..+++|++|++++|.+++..|..|..+++|+.|++++|++++ +|..+..+++|++|+|++|+++ .+|..+..
T Consensus 240 ~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~ 316 (390)
T 3o6n_A 240 DT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQ 316 (390)
T ss_dssp CC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHH
T ss_pred cc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccc
Confidence 76 467788999999999999998888999999999999999999986 4666788999999999999998 56778899
Q ss_pred cccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCcccCCCCCCCCCCCcccccCCccccCCC
Q 040702 372 LISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGEIPREGPFRNLSAESFKGNELLCGMP 437 (797)
Q Consensus 372 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~~ 437 (797)
+++|++|+|++|++++. | +..+++|+.|++++|++++.... ..+..+....+.+++..|.++
T Consensus 317 l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 317 FDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp HTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTT
T ss_pred cCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceeccc
Confidence 99999999999999855 3 67889999999999999875322 234445555677788888765
No 53
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.1e-37 Score=348.69 Aligned_cols=351 Identities=28% Similarity=0.331 Sum_probs=272.9
Q ss_pred CCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCC-------------CEEE
Q 040702 17 LGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTL-------------KSLY 83 (797)
Q Consensus 17 ~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L-------------~~L~ 83 (797)
--..++|++|++++|.+ .++|++++++++|++|++++|++.+..|..++++.+| ++|+
T Consensus 7 ~~~~~~L~~L~l~~n~l---------~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~ 77 (454)
T 1jl5_A 7 NVSNTFLQEPLRHSSNL---------TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELE 77 (454)
T ss_dssp ------------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEE
T ss_pred ccccccchhhhcccCch---------hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEE
Confidence 34578999999999983 5678899999999999999999999999999999875 9999
Q ss_pred ccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCc
Q 040702 84 LHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLT 163 (797)
Q Consensus 84 Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~ 163 (797)
+++|.++ .+|.. .++|++|++++|.+++ +|.. +++|++|++++|+++++... .++|++|+|++|.++
T Consensus 78 l~~~~l~-~lp~~----~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~~----~~~L~~L~L~~n~l~ 144 (454)
T 1jl5_A 78 LNNLGLS-SLPEL----PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSDL----PPLLEYLGVSNNQLE 144 (454)
T ss_dssp CTTSCCS-CCCSC----CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCSC----CTTCCEEECCSSCCS
T ss_pred ecCCccc-cCCCC----cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccCC----CCCCCEEECcCCCCC
Confidence 9999998 67762 4799999999999997 5643 48999999999999975421 279999999999999
Q ss_pred CCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhccccccccc
Q 040702 164 SSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLE 243 (797)
Q Consensus 164 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~ 243 (797)
.++ . |.++++|++|++++|+++++ |..+ .+|+.|++++|.+++ +| .++++++| ++|++++|+++
T Consensus 145 ~lp-~------~~~l~~L~~L~l~~N~l~~l-p~~~----~~L~~L~L~~n~l~~-l~-~~~~l~~L--~~L~l~~N~l~ 208 (454)
T 1jl5_A 145 KLP-E------LQNSSFLKIIDVDNNSLKKL-PDLP----PSLEFIAAGNNQLEE-LP-ELQNLPFL--TAIYADNNSLK 208 (454)
T ss_dssp SCC-C------CTTCTTCCEEECCSSCCSCC-CCCC----TTCCEEECCSSCCSS-CC-CCTTCTTC--CEEECCSSCCS
T ss_pred CCc-c------cCCCCCCCEEECCCCcCccc-CCCc----ccccEEECcCCcCCc-Cc-cccCCCCC--CEEECCCCcCC
Confidence 866 2 78899999999999999974 4332 389999999999997 56 68999998 99999999999
Q ss_pred CCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccc
Q 040702 244 GSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGN 323 (797)
Q Consensus 244 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 323 (797)
++ |.. .++|++|++++|+++. .| .++.+++|++|++++|+++.+|.. +++|+.|++++|++++ +|..
T Consensus 209 ~l-~~~---~~~L~~L~l~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~-l~~~--- 275 (454)
T 1jl5_A 209 KL-PDL---PLSLESIVAGNNILEE-LP-ELQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTD-LPEL--- 275 (454)
T ss_dssp SC-CCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSC-CCCC---
T ss_pred cC-CCC---cCcccEEECcCCcCCc-cc-ccCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccc-cCcc---
Confidence 63 332 2589999999999994 45 489999999999999999999864 4789999999999996 4433
Q ss_pred cccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhcc-ccCCeeeecCCcCCCCCChhhhccCCCCeE
Q 040702 324 LNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDL-ISLKSLNLSNNNLSGTIPISLEKLLDLKDI 402 (797)
Q Consensus 324 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 402 (797)
.++|+.|++++|++++. |.. .++|+.|++++|++++ ++ .+ ++|++|++++|++++ +|.. +++|+.|
T Consensus 276 ~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L 342 (454)
T 1jl5_A 276 PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERL 342 (454)
T ss_dssp CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEE
T ss_pred cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEE
Confidence 37899999999999874 221 2689999999999985 22 23 589999999999996 5543 5899999
Q ss_pred EccCCcCcccCCCCCCCCCCCcccccCCcccc
Q 040702 403 NVSFNRLEGEIPREGPFRNLSAESFKGNELLC 434 (797)
Q Consensus 403 ~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c 434 (797)
++++|+++.. |. .+..++.+++++|.+.+
T Consensus 343 ~L~~N~l~~l-p~--~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 343 IASFNHLAEV-PE--LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp ECCSSCCSCC-CC--CCTTCCEEECCSSCCSS
T ss_pred ECCCCccccc-cc--hhhhccEEECCCCCCCc
Confidence 9999999964 44 46889999999998766
No 54
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=334.82 Aligned_cols=240 Identities=23% Similarity=0.282 Sum_probs=201.2
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
.++|...+.||+|+||.||++ +..||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 468999999999999999984 688999998655445567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCccc
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSL 665 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~ 665 (797)
+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999886667999999999999999999999 9999999999999999999999999999998654332211
Q ss_pred ------------cccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh-------------------h
Q 040702 666 ------------TQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE-------------------E 714 (797)
Q Consensus 666 ------------~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~-------------------~ 714 (797)
......||+.|+|||.+.+..++.++|+|++|+..+..+....+.... +
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCP 245 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCC
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCC
Confidence 112467999999999999999999999999999875555333222111 1
Q ss_pred hhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHHh
Q 040702 715 KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELE 753 (797)
Q Consensus 715 ~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~ 753 (797)
......+.++++.|++.||++||++.++.+.++.++..-
T Consensus 246 ~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 246 PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 233456778999999999999999999999999887653
No 55
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.4e-37 Score=344.19 Aligned_cols=333 Identities=17% Similarity=0.190 Sum_probs=280.7
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+||++|.+++. | .|+.+++|++|||++|++++ +| ++.+++|++|++++|+++++ | |+++++|++
T Consensus 47 L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~---------~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~ 110 (457)
T 3bz5_A 47 LDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT---------LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTY 110 (457)
T ss_dssp EECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC---------CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCE
T ss_pred EEccCCCcccC-h-hhcccCCCCEEEccCCcCCe---------Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcCCE
Confidence 68999999986 4 69999999999999999654 33 78899999999999999985 3 899999999
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCcc
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNY 161 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~ 161 (797)
|+|++|+++ .+| +..+++|++|++++|++++. + +..+++|++|++++|+..+.. .|..+++|++|++++|+
T Consensus 111 L~L~~N~l~-~l~---~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~ 181 (457)
T 3bz5_A 111 LNCDTNKLT-KLD---VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNK 181 (457)
T ss_dssp EECCSSCCS-CCC---CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSC
T ss_pred EECCCCcCC-eec---CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCc
Confidence 999999998 565 57899999999999999974 3 889999999999999544333 58899999999999999
Q ss_pred CcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhccccccc
Q 040702 162 LTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQ 241 (797)
Q Consensus 162 l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~ 241 (797)
++.++ +..+++|+.|++++|+++++ .+..++ +|+.|++++|++++ +| ++.+++| ++|++++|+
T Consensus 182 l~~l~--------l~~l~~L~~L~l~~N~l~~~---~l~~l~-~L~~L~Ls~N~l~~-ip--~~~l~~L--~~L~l~~N~ 244 (457)
T 3bz5_A 182 ITELD--------VSQNKLLNRLNCDTNNITKL---DLNQNI-QLTFLDCSSNKLTE-ID--VTPLTQL--TYFDCSVNP 244 (457)
T ss_dssp CCCCC--------CTTCTTCCEEECCSSCCSCC---CCTTCT-TCSEEECCSSCCSC-CC--CTTCTTC--SEEECCSSC
T ss_pred cceec--------cccCCCCCEEECcCCcCCee---ccccCC-CCCEEECcCCcccc-cC--ccccCCC--CEEEeeCCc
Confidence 99864 56788999999999999987 377777 89999999999998 45 7888888 999999999
Q ss_pred ccCCCchhhcCCC-------CCcEEEccCCcCcccCCCCccCCccccccccCCCCC-CCCCC--------CCCCCCcccE
Q 040702 242 LEGSIPDDLCRLA-------ALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLL-TSIPS--------TLWNLKDILH 305 (797)
Q Consensus 242 l~~~~~~~~~~l~-------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l-~~lp~--------~~~~l~~L~~ 305 (797)
+++..+..+..+. +|+.|++++|.+.+..| ++.+++|+.|++++|.+ +.+|. .+.++++|+.
T Consensus 245 l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~ 322 (457)
T 3bz5_A 245 LTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVY 322 (457)
T ss_dssp CSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCE
T ss_pred CCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCE
Confidence 9987765555444 45556666666554444 56789999999999975 44443 3556789999
Q ss_pred EEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcC
Q 040702 306 LNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNL 385 (797)
Q Consensus 306 L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 385 (797)
|++++|++++. .++.+++|+.|++++|++++ ++.|..|++++|.+.|. +.+..|..+++++|++
T Consensus 323 L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l 386 (457)
T 3bz5_A 323 LYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSL 386 (457)
T ss_dssp EECTTCCCSCC---CCTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBE
T ss_pred EECCCCccccc---ccccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcE
Confidence 99999999985 38999999999999999985 35788899999999875 4677899999999999
Q ss_pred CCCCChhhh
Q 040702 386 SGTIPISLE 394 (797)
Q Consensus 386 ~~~~p~~~~ 394 (797)
+|.+|..+.
T Consensus 387 ~g~ip~~~~ 395 (457)
T 3bz5_A 387 TIAVSPDLL 395 (457)
T ss_dssp EEECCTTCB
T ss_pred EEEcChhHh
Confidence 999987654
No 56
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=344.44 Aligned_cols=246 Identities=21% Similarity=0.235 Sum_probs=196.8
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKA 580 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~ 580 (797)
..++|+..+.||+|+||.||++ ++.||||++++.. ....+.+.+|.++++.+ +||||+++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3478999999999999999974 6899999998652 23456788899999988 6999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCc
Q 040702 581 LVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~ 660 (797)
+||||+++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+....
T Consensus 101 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999997654 4899999999999999999999 89999999999999999999999999999985432
Q ss_pred cCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhhh----------------hhhcccccc
Q 040702 661 EDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREEK----------------HLMTKEQPM 724 (797)
Q Consensus 661 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l 724 (797)
.. ......+||+.|||||.+.+..++.++|+|++|+..++++.+..++..... .......++
T Consensus 177 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~l 254 (353)
T 3txo_A 177 NG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGI 254 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred CC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 22 234557899999999999988999999999999998766665554432211 123356678
Q ss_pred hhccccCCCCCCCChHHHHHhHHHHHHHhccccccccccCCcccccceeeeeeeee
Q 040702 725 VRMGTDLSLGQFPASYSISKYLVYIRELERGKVGITSVAAFPIVHHYLYRTVDYTI 780 (797)
Q Consensus 725 ~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 780 (797)
++.|+..||.+||++. ....+..+++|+||++++|+.
T Consensus 255 i~~lL~~dP~~R~~~~-------------------~~~~~~~il~hp~f~~~~w~~ 291 (353)
T 3txo_A 255 LKSFMTKNPTMRLGSL-------------------TQGGEHAILRHPFFKEIDWAQ 291 (353)
T ss_dssp HHHHTCSSGGGSTTSG-------------------GGTCTHHHHTSGGGTTCCHHH
T ss_pred HHHHhhhCHHHccCCc-------------------ccCCHHHHhhCCcccCCCHHH
Confidence 8889999999999852 112345567788888888864
No 57
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=6.3e-38 Score=343.01 Aligned_cols=223 Identities=21% Similarity=0.206 Sum_probs=188.1
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~l 581 (797)
.++|+..+.||+|+||.||++ ++.||||++++.. ....+.+.+|..++.++ +||||+++++++.+++..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 468999999999999999974 6899999998663 23346688999999887 89999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
||||+++|+|..++...+ .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999999997654 4899999999999999999999 999999999999999999999999999999863322
Q ss_pred CccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh-------------------------hhh
Q 040702 662 DQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE-------------------------EKH 716 (797)
Q Consensus 662 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~-------------------------~~~ 716 (797)
. ......+||+.|||||.+.+..++.++|+|++|+..++++.+..++... +..
T Consensus 207 ~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 207 G--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp T--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred C--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 2 2345678999999999999999999999999999987766665554210 111
Q ss_pred hhcccccchhccccCCCCCCCCh
Q 040702 717 LMTKEQPMVRMGTDLSLGQFPAS 739 (797)
Q Consensus 717 ~~~~~~~l~~~cl~~dp~~RPs~ 739 (797)
......++++.|+..||.+||++
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred CCHHHHHHHHHHhcCCHhHcCCC
Confidence 23355788899999999999986
No 58
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.3e-38 Score=339.31 Aligned_cols=250 Identities=30% Similarity=0.438 Sum_probs=207.4
Q ss_pred cCHHHHHHHhcCCCccccccccCCcceeec----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCC
Q 040702 502 FTYLELFQATNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDD 577 (797)
Q Consensus 502 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~ 577 (797)
+++.++...+++|+..+.||+|+||.||++ ++.||||++........+.+.+|++++++++||||+++++++...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 444455567899999999999999999985 6899999987666556678999999999999999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecC
Q 040702 578 FKALVLEYMPLGSLEKCLYSGN---YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGM 654 (797)
Q Consensus 578 ~~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGl 654 (797)
..++||||+++|+|.+++.... ..+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999986543 25899999999999999999999 89999999999999999999999999999
Q ss_pred CccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccch----------------------
Q 040702 655 AKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIR---------------------- 712 (797)
Q Consensus 655 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~---------------------- 712 (797)
++...............||+.|+|||.+.++.++.++|+|++|+..++.+.+..++..
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 9865433333233455699999999999999999999999999987555443322111
Q ss_pred -----------hhhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHHhc
Q 040702 713 -----------EEKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELER 754 (797)
Q Consensus 713 -----------~~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~ 754 (797)
...+....+.++++.|++.||++||++.|+++.++.+.+...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp CSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred HHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 112223345678889999999999999999999998876643
No 59
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=8.3e-38 Score=335.89 Aligned_cols=228 Identities=20% Similarity=0.234 Sum_probs=190.5
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEec---cCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQ---YGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|+..+.||+|+||.||++ ++.||||++++. .......+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 468999999999999999974 689999999865 234456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999987654 4899999999999999999999 8999999999999999999999999999998643222
Q ss_pred ccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh----------------hhhhcccccchh
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE----------------KHLMTKEQPMVR 726 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~ 726 (797)
......+||+.|+|||.+.+..++.++|+|++|+..++.+.+..++.... ........++++
T Consensus 160 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 237 (337)
T 1o6l_A 160 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLA 237 (337)
T ss_dssp --CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred --CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 23355789999999999999999999999999999866665554432211 112335577888
Q ss_pred ccccCCCCCCC-----ChHHHHH
Q 040702 727 MGTDLSLGQFP-----ASYSISK 744 (797)
Q Consensus 727 ~cl~~dp~~RP-----s~~~i~~ 744 (797)
.|+..||.+|| ++.|+++
T Consensus 238 ~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 238 GLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHhhcCHHHhcCCCCCCHHHHHc
Confidence 89999999998 5555543
No 60
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.9e-37 Score=327.98 Aligned_cols=227 Identities=23% Similarity=0.314 Sum_probs=195.5
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
.++|...+.||+|+||.||++ ++.||||++........+.+.+|+.++++++||||+++++++..++..|+||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 468999999999999999985 689999999877666667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCccc
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSL 665 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~ 665 (797)
+++|+|.+++.... +++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 99 ~~~~~L~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (297)
T ss_dssp CTTCBHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--
T ss_pred CCCCCHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--
Confidence 99999999998763 899999999999999999999 89999999999999999999999999999986543322
Q ss_pred cccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh-------------------hhhhhcccccchh
Q 040702 666 TQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE-------------------EKHLMTKEQPMVR 726 (797)
Q Consensus 666 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~l~~ 726 (797)
......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++... +......+.++++
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 251 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 251 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHH
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHH
Confidence 334567999999999999999999999999999986665554443221 1223334678999
Q ss_pred ccccCCCCCCCChHHHHH
Q 040702 727 MGTDLSLGQFPASYSISK 744 (797)
Q Consensus 727 ~cl~~dp~~RPs~~~i~~ 744 (797)
.|++.||++||++.|+++
T Consensus 252 ~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 252 RCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHSCSSTTTSCCHHHHTT
T ss_pred HHccCChhHCcCHHHHhh
Confidence 999999999999988864
No 61
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.3e-37 Score=356.69 Aligned_cols=334 Identities=20% Similarity=0.204 Sum_probs=225.9
Q ss_pred CCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeee
Q 040702 77 STLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLG 156 (797)
Q Consensus 77 ~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~ 156 (797)
++++.|++++|.++ .+|..+|..+++|++|+|++|.|++..|..|..+++|++|+|++|.|+++.|..|+++++|++|+
T Consensus 51 ~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 51 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp CCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 34455555555554 44444444455555555555555544444555555555555555555555555555555555555
Q ss_pred ccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcc
Q 040702 157 LNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLS 236 (797)
Q Consensus 157 L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~ 236 (797)
|++|.|+.+++.+ |.++++|++|+|++|.+.++.|..|..++ +|+.|++++|.+++.. ++.+++| +.|+
T Consensus 130 L~~n~l~~l~~~~-----~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~---~~~l~~L--~~L~ 198 (597)
T 3oja_B 130 LERNDLSSLPRGI-----FHNTPKLTTLSMSNNNLERIEDDTFQATT-SLQNLQLSSNRLTHVD---LSLIPSL--FHAN 198 (597)
T ss_dssp CCSSCCCCCCTTT-----TTTCTTCCEEECCSSCCCBCCTTTTTTCT-TCCEEECTTSCCSBCC---GGGCTTC--SEEE
T ss_pred eeCCCCCCCCHHH-----hccCCCCCEEEeeCCcCCCCChhhhhcCC-cCcEEECcCCCCCCcC---hhhhhhh--hhhh
Confidence 5555555544432 44455555555555555555555555544 4555555555555432 2233344 6667
Q ss_pred cccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCC
Q 040702 237 LEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGP 316 (797)
Q Consensus 237 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~ 316 (797)
+++|.+.+ +....+|+.|++++|.+..+.+..+ ++|+.|+|++|.++.. ..+..+++|+.|++++|.+++.
T Consensus 199 l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~~---~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~ 269 (597)
T 3oja_B 199 VSYNLLST-----LAIPIAVEELDASHNSINVVRGPVN---VELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKI 269 (597)
T ss_dssp CCSSCCSE-----EECCTTCSEEECCSSCCCEEECSCC---SCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEE
T ss_pred cccCcccc-----ccCCchhheeeccCCcccccccccC---CCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCC
Confidence 77776653 2344578899999999886654433 6899999999999775 5678899999999999999988
Q ss_pred CCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhcc
Q 040702 317 LPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKL 396 (797)
Q Consensus 317 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 396 (797)
.|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.+++.. +..+
T Consensus 270 ~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~ 344 (597)
T 3oja_B 270 MYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTH 344 (597)
T ss_dssp ESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTT
T ss_pred CHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhc
Confidence 89999999999999999999986 4667788999999999999998 67888999999999999999998653 6678
Q ss_pred CCCCeEEccCCcCcccCCCCCCCCCCCcccccCCccccCCC
Q 040702 397 LDLKDINVSFNRLEGEIPREGPFRNLSAESFKGNELLCGMP 437 (797)
Q Consensus 397 ~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~~ 437 (797)
++|+.|++++|+++|.... ..+..+....+.+++..|+.+
T Consensus 345 ~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 345 HTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 8999999999999876432 234455555677888888764
No 62
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.4e-38 Score=350.98 Aligned_cols=270 Identities=18% Similarity=0.204 Sum_probs=201.5
Q ss_pred CHHHHHHHhcCCCccccccccCCcceeec-----ceEEEEEEEEec---cCCcchhHHHHHHHhhhccCCceeEeeeeee
Q 040702 503 TYLELFQATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQ---YGGAFKSFDIECGMMKRIRHRNLIKIISSCS 574 (797)
Q Consensus 503 ~~~~l~~~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~ 574 (797)
.+.++...+++|+..+.||+|+||.||++ ++.||||++++. .......+.+|+.++..++||||++++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 44555667789999999999999999974 689999999864 2333456899999999999999999999999
Q ss_pred cCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecC
Q 040702 575 NDDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGM 654 (797)
Q Consensus 575 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGl 654 (797)
+++..|+||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhh
Confidence 999999999999999999999875556999999999999999999999 99999999999999999999999999999
Q ss_pred CccCCccCccccccccccCcccccccccc-----cCccchHHHHHHHhhhhhhhhccccccchhh-hhhhcccccchhcc
Q 040702 655 AKPLLEEDQSLTQTQTLATIGYMAPDEIF-----SGEMRLKCWVNDSLLISVMIVVDANLLIREE-KHLMTKEQPMVRMG 728 (797)
Q Consensus 655 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~c 728 (797)
|+....... ......+||+.|||||.+. .+.++.++|+|++|+..++++.+..++.... .+... .++...
T Consensus 222 a~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~---~i~~~~ 297 (437)
T 4aw2_A 222 CLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG---KIMNHK 297 (437)
T ss_dssp CEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---HHHTHH
T ss_pred hhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHH---hhhhcc
Confidence 986643322 2334568999999999987 5678999999999999877776655543322 11111 111110
Q ss_pred c-cCCCCCCCC-hHHHHHhHHHHHHHhccccccccccCCcccccceeeeeeeeec
Q 040702 729 T-DLSLGQFPA-SYSISKYLVYIRELERGKVGITSVAAFPIVHHYLYRTVDYTIS 781 (797)
Q Consensus 729 l-~~dp~~RPs-~~~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 781 (797)
. -.-|...+. ..++.+.++.+-..+..+.+ ...+.++++|+||++++|+..
T Consensus 298 ~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~--r~~~~eil~Hpff~~i~w~~l 350 (437)
T 4aw2_A 298 ERFQFPTQVTDVSENAKDLIRRLICSREHRLG--QNGIEDFKKHPFFSGIDWDNI 350 (437)
T ss_dssp HHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTT--TTTTHHHHTSGGGTTCCTTTG
T ss_pred ccccCCcccccCCHHHHHHHHHHhcccccccC--CCCHHHHhCCCccCCCCHHHH
Confidence 0 011221111 13334444433222222221 223556778999999998753
No 63
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=7.8e-38 Score=337.05 Aligned_cols=243 Identities=19% Similarity=0.246 Sum_probs=198.7
Q ss_pred HHHhcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhc-cCCceeEeeeeeecCCe
Q 040702 508 FQATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDF 578 (797)
Q Consensus 508 ~~~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~ 578 (797)
....++|...+.||+|+||.||++ ++.||||++++.. ....+.+..|..+++.+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345689999999999999999974 6899999998652 33456788899999887 89999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccC
Q 040702 579 KALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 658 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~ 658 (797)
.|+||||+++|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+|+..
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 999999999999999997654 4899999999999999999999 899999999999999999999999999999864
Q ss_pred CccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhhh----------------hhhcccc
Q 040702 659 LEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREEK----------------HLMTKEQ 722 (797)
Q Consensus 659 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ 722 (797)
.... ......+||+.|+|||.+.+..++.++|+|++|+..++.+.+..++..... .......
T Consensus 169 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~ 246 (345)
T 1xjd_A 169 MLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAK 246 (345)
T ss_dssp CCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred ccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccCHHHH
Confidence 3222 134557899999999999999999999999999998666655544332111 1223556
Q ss_pred cchhccccCCCCCCCChHHHHHhHHHHHHHhccccccccccCCcccccceeeeeeeee
Q 040702 723 PMVRMGTDLSLGQFPASYSISKYLVYIRELERGKVGITSVAAFPIVHHYLYRTVDYTI 780 (797)
Q Consensus 723 ~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 780 (797)
++++.|+..||++||++. ..+++|+||++++|+.
T Consensus 247 ~li~~lL~~dp~~R~~~~------------------------~~i~~hp~f~~~~w~~ 280 (345)
T 1xjd_A 247 DLLVKLFVREPEKRLGVR------------------------GDIRQHPLFREINWEE 280 (345)
T ss_dssp HHHHHHSCSSGGGSBTTB------------------------SCGGGSGGGTTCCHHH
T ss_pred HHHHHHhcCCHhHcCCCh------------------------HHHHcCccccCCCHHH
Confidence 788888888999888864 1456677777777753
No 64
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1e-37 Score=334.73 Aligned_cols=266 Identities=19% Similarity=0.208 Sum_probs=210.7
Q ss_pred cCCCccccccccCCcceeec-----ce----EEEEEEEEecc-CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GM----EVAIKVFNLQY-GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 581 (797)
++|...+.||+|+||.||++ +. .||+|.+.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57899999999999999985 22 47888775443 334567889999999999999999999986 456889
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999876556899999999999999999999 899999999999999999999999999999876544
Q ss_pred CccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchhh-----------------hhhhccccc
Q 040702 662 DQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIREE-----------------KHLMTKEQP 723 (797)
Q Consensus 662 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~~-----------------~~~~~~~~~ 723 (797)
..........||..|+|||.+.++.++.++|+|++|+..+..+. +..++.... ......+.+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYM 248 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTH
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHH
Confidence 43334455678889999999999999999999999999866554 443332211 112346778
Q ss_pred chhccccCCCCCCCChHHHHHhHHHHHHHhccccccccccCCcccccceeeeeeeeec
Q 040702 724 MVRMGTDLSLGQFPASYSISKYLVYIRELERGKVGITSVAAFPIVHHYLYRTVDYTIS 781 (797)
Q Consensus 724 l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 781 (797)
+++.|+..||.+||++.++++.++.+...+............+...++++.+++|+..
T Consensus 249 li~~~l~~dp~~Rps~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 306 (325)
T 3kex_A 249 VMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTNKKL 306 (325)
T ss_dssp HHHHHTCSCTTTSCCHHHHHHHHHHHTTSHHHHBCCCSSSSCCCBCCCCCCC------
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHHHhcchhhhccccCCCCCCCCCCccccchhhcc
Confidence 9999999999999999999999999877666555555555666677888888888754
No 65
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.7e-37 Score=333.31 Aligned_cols=251 Identities=30% Similarity=0.403 Sum_probs=208.3
Q ss_pred cccCccCHHHHHHHhcCCCccccccccCCcceeec----ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeee
Q 040702 497 ADQRRFTYLELFQATNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIIS 571 (797)
Q Consensus 497 ~~~~~~~~~~l~~~~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~ 571 (797)
.....+++.++...+++|...+.||+|+||.||++ ++.||||++..... .....+.+|+++++.++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 34567899999999999999999999999999984 68899999876532 23457899999999999999999999
Q ss_pred eeecCCeEEEEEEccCCCCHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEE
Q 040702 572 SCSNDDFKALVLEYMPLGSLEKCLYSGNY---ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAH 648 (797)
Q Consensus 572 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~k 648 (797)
++..++..++||||+++|+|.+++..... .+++..+..++.|++.||+|||..+..+|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 99999999999999999999999986543 589999999999999999999922222999999999999999999999
Q ss_pred EEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccch----------------
Q 040702 649 LSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIR---------------- 712 (797)
Q Consensus 649 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~---------------- 712 (797)
|+|||+++....... .......||+.|+|||.+.++.++.++|+|++|+..+..+.+..++..
T Consensus 175 l~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 175 VGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp ECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred eccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 999999986643322 233445699999999999999999999999999998666555444321
Q ss_pred -------------------hhhhhhcccccchhccccCCCCCCCChHHHHHhHHH
Q 040702 713 -------------------EEKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVY 748 (797)
Q Consensus 713 -------------------~~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~ 748 (797)
........+.+++..|++.||.+||++.|+++.|+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 111223456788889999999999999999998865
No 66
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-36 Score=335.06 Aligned_cols=309 Identities=20% Similarity=0.235 Sum_probs=236.9
Q ss_pred CCCCCCEEeCCCCCCCCcCCCccccCCCcc-ccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCcc
Q 040702 19 NPSSLQTLYLSYNPPSGSIPSFILCEIPHE-IDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSA 97 (797)
Q Consensus 19 ~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~-~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~ 97 (797)
.++++++|++++|. ++.+|.. +..+++|++|++++|++.++.+..|.++++|++|+|++|.++ .++...
T Consensus 43 ~l~~l~~l~l~~~~---------l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~ 112 (390)
T 3o6n_A 43 TLNNQKIVTFKNST---------MRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHV 112 (390)
T ss_dssp GGCCCSEEEEESCE---------ESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTT
T ss_pred ccCCceEEEecCCc---------hhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCC-cCCHHH
Confidence 46899999999998 5566665 688999999999999999998899999999999999999998 777777
Q ss_pred ccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCC
Q 040702 98 DVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSN 177 (797)
Q Consensus 98 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~ 177 (797)
|..+++|++|+|++|+++...+..|.++++|++|+|++|+|+++.+.+|.++++|++|+|++|.++.++ +..
T Consensus 113 ~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------~~~ 184 (390)
T 3o6n_A 113 FQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--------LSL 184 (390)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--------GGG
T ss_pred hcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc--------ccc
Confidence 889999999999999999766667899999999999999999999999999999999999999999874 456
Q ss_pred CCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCc
Q 040702 178 CKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALF 257 (797)
Q Consensus 178 l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 257 (797)
+++|+.|++++|.+.+.. .+.+++.|++++|.+....... .++| ++|++++|.+++. ..+..+++|+
T Consensus 185 l~~L~~L~l~~n~l~~~~------~~~~L~~L~l~~n~l~~~~~~~---~~~L--~~L~l~~n~l~~~--~~l~~l~~L~ 251 (390)
T 3o6n_A 185 IPSLFHANVSYNLLSTLA------IPIAVEELDASHNSINVVRGPV---NVEL--TILKLQHNNLTDT--AWLLNYPGLV 251 (390)
T ss_dssp CTTCSEEECCSSCCSEEE------CCSSCSEEECCSSCCCEEECCC---CSSC--CEEECCSSCCCCC--GGGGGCTTCS
T ss_pred ccccceeecccccccccC------CCCcceEEECCCCeeeeccccc---cccc--cEEECCCCCCccc--HHHcCCCCcc
Confidence 788999999999987542 2237888888888887543322 2344 7777777777643 4667777777
Q ss_pred EEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCccc
Q 040702 258 QLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNF 337 (797)
Q Consensus 258 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 337 (797)
+|++++|.+++..|..|..+++|+.|+|++|.++.+|..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|.+
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i 330 (390)
T 3o6n_A 252 EVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI 330 (390)
T ss_dssp EEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCC
T ss_pred EEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcc
Confidence 777777777776677777777777777777777766666656666666666666666 3344455556666666666665
Q ss_pred ccccCccccCCcccceecccCcccc
Q 040702 338 SCVIPTKIGGLKDLQYLFLEYNRLQ 362 (797)
Q Consensus 338 ~~~~~~~~~~l~~L~~L~Ls~N~l~ 362 (797)
+... +..+++|+.|++++|++.
T Consensus 331 ~~~~---~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 331 VTLK---LSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp CCCC---CCTTCCCSEEECCSSCEE
T ss_pred ceeC---chhhccCCEEEcCCCCcc
Confidence 5331 344445555555555444
No 67
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.6e-37 Score=337.23 Aligned_cols=240 Identities=23% Similarity=0.305 Sum_probs=199.7
Q ss_pred hcCCCccccccccCCcceeecc------------eEEEEEEEEeccC-CcchhHHHHHHHhhhc-cCCceeEeeeeeecC
Q 040702 511 TNRFSENNLIGRGGFGPVYKDG------------MEVAIKVFNLQYG-GAFKSFDIECGMMKRI-RHRNLIKIISSCSND 576 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~~------------~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 576 (797)
.++|...+.||+|+||.||++. ..||||+++.... ...+.+.+|+++++++ +||||++++++|.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 4789999999999999999752 4699999975432 2346789999999999 899999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE
Q 040702 577 DFKALVLEYMPLGSLEKCLYSGN---------------YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 641 (797)
Q Consensus 577 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll 641 (797)
+..|+||||+++|+|.+++.... ..+++..++.++.||+.||+||| +++|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999997643 24789999999999999999999 9999999999999999
Q ss_pred cCCCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchhh------
Q 040702 642 DDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIREE------ 714 (797)
Q Consensus 642 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~~------ 714 (797)
+.++.+||+|||+++...............||+.|+|||.+.+..++.++|+|++|+..++.+. +..++....
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~ 316 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999999986654433333445568899999999999999999999999999866554 333322211
Q ss_pred -----------hhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHHh
Q 040702 715 -----------KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELE 753 (797)
Q Consensus 715 -----------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~ 753 (797)
......+.++++.||+.||.+||++.|+++.|+.+....
T Consensus 317 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 317 LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 112235667899999999999999999999999987653
No 68
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.6e-37 Score=332.81 Aligned_cols=236 Identities=21% Similarity=0.228 Sum_probs=194.7
Q ss_pred hcCCCccccccccCCcceeec---ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCC----eEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDD----FKALVL 583 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~----~~~lv~ 583 (797)
.++|+..+.||+|+||.||++ ++.||||+++.... ....+..|+.++++++||||+++++++.... ..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEECCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 478999999999999999986 68999999965432 2345667899999999999999999998754 479999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCC----------CeEEcCCCCCceEEcCCCcEEEEeec
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSV----------PIIHCDLKPSNVLLDDNMVAHLSDFG 653 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~----------~ivHrDlkp~NIll~~~~~~kl~DFG 653 (797)
||+++|+|.+++.... +++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||
T Consensus 102 e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 102 AFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp ECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 9999999999998754 899999999999999999999 87 99999999999999999999999999
Q ss_pred CCccCCccCccccccccccCccccccccccc-----CccchHHHHHHHhhhhhhhhccccccchhh--------------
Q 040702 654 MAKPLLEEDQSLTQTQTLATIGYMAPDEIFS-----GEMRLKCWVNDSLLISVMIVVDANLLIREE-------------- 714 (797)
Q Consensus 654 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------- 714 (797)
+|+...............||+.|+|||.+.+ ..++.++|+|++|+..++.+.+..++....
T Consensus 177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 256 (322)
T 3soc_A 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH 256 (322)
T ss_dssp TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence 9987654433333445689999999999876 467789999999999866655433221100
Q ss_pred ---h----------------------hhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 715 ---K----------------------HLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 715 ---~----------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
. .....+.++++.||+.||++|||+.|+++.|+.+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 257 PSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0 0111267889999999999999999999999998875
No 69
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=9.6e-38 Score=337.44 Aligned_cols=245 Identities=20% Similarity=0.194 Sum_probs=199.1
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKA 580 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~ 580 (797)
..++|+..+.||+|+||.||++ ++.||||++++.. ....+.+..|..+++.+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3478999999999999999974 5789999998652 33456788999999988 7999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCc
Q 040702 581 LVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~ 660 (797)
+||||+++|+|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+|+....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999997654 4899999999999999999999 89999999999999999999999999999986432
Q ss_pred cCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh----------------hhhhcccccc
Q 040702 661 EDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE----------------KHLMTKEQPM 724 (797)
Q Consensus 661 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~l 724 (797)
.. ......+||+.|+|||.+.+..++.++|+|++|+..++.+.+..++.... ........++
T Consensus 174 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 251 (353)
T 2i0e_A 174 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAI 251 (353)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred CC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 22 23455789999999999999999999999999999876666555443211 1123355678
Q ss_pred hhccccCCCCCCCChHHHHHhHHHHHHHhccccccccccCCcccccceeeeeeeee
Q 040702 725 VRMGTDLSLGQFPASYSISKYLVYIRELERGKVGITSVAAFPIVHHYLYRTVDYTI 780 (797)
Q Consensus 725 ~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 780 (797)
++.|+..||.+||++. +..+.++++|+||++++|+.
T Consensus 252 i~~lL~~dP~~R~~~~--------------------~~~~~~i~~h~~f~~~~w~~ 287 (353)
T 2i0e_A 252 CKGLMTKHPGKRLGCG--------------------PEGERDIKEHAFFRYIDWEK 287 (353)
T ss_dssp HHHHTCSCTTSCTTCS--------------------TTHHHHHHTSGGGTTCCHHH
T ss_pred HHHHhhcCHHHcCCCC--------------------CCCHHHHhcCccccCCCHHH
Confidence 8889999999998742 11233445677777777754
No 70
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.3e-38 Score=337.45 Aligned_cols=224 Identities=21% Similarity=0.198 Sum_probs=187.8
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC---cchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG---AFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~---~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~l 581 (797)
.++|+..+.||+|+||.||++ ++.||||++++.... ..+.+.+|..+++++ +||||+++++++.+.+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 368999999999999999974 689999999866432 235678899999988 89999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
||||+++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 v~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999997654 4899999999999999999999 999999999999999999999999999999864322
Q ss_pred CccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccch-------------------------hhhh
Q 040702 662 DQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIR-------------------------EEKH 716 (797)
Q Consensus 662 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~-------------------------~~~~ 716 (797)
. ......+||+.|+|||.+.+..++.++|+|++|+..++.+.+..++.. .+..
T Consensus 164 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 241 (345)
T 3a8x_A 164 G--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 241 (345)
T ss_dssp T--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTT
T ss_pred C--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCC
Confidence 2 234556899999999999999999999999999998666665554421 0011
Q ss_pred hhcccccchhccccCCCCCCCChH
Q 040702 717 LMTKEQPMVRMGTDLSLGQFPASY 740 (797)
Q Consensus 717 ~~~~~~~l~~~cl~~dp~~RPs~~ 740 (797)
......++++.|+..||.+||++.
T Consensus 242 ~s~~~~~li~~lL~~dP~~R~~~~ 265 (345)
T 3a8x_A 242 LSVKAASVLKSFLNKDPKERLGCH 265 (345)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCC
T ss_pred CCHHHHHHHHHHhcCCHhHCCCCC
Confidence 233556888999999999999863
No 71
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=336.66 Aligned_cols=222 Identities=22% Similarity=0.227 Sum_probs=188.0
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|...+.||+|+||.||++ ++.||+|++.... ....+.+.+|+.+++.++|||||++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 368999999999999999974 6889999997652 33456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+|+......
T Consensus 94 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp ECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 99999999999998754 4899999999999999999999 9999999999999999999999999999998654322
Q ss_pred ccccccccccCccccccccccc---CccchHHHHHHHhhhhhhhhccccccch-------------------hhhhhhcc
Q 040702 663 QSLTQTQTLATIGYMAPDEIFS---GEMRLKCWVNDSLLISVMIVVDANLLIR-------------------EEKHLMTK 720 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~dv~s~~~~~~~~~~~~~~~~~-------------------~~~~~~~~ 720 (797)
.....+||+.|+|||.+.. ..++.++|+|++|+..+..+.+..++.. .+......
T Consensus 170 ---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~ 246 (384)
T 4fr4_A 170 ---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQE 246 (384)
T ss_dssp ---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHH
T ss_pred ---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHH
Confidence 3355789999999999863 4589999999999998766665554421 11122345
Q ss_pred cccchhccccCCCCCCCCh
Q 040702 721 EQPMVRMGTDLSLGQFPAS 739 (797)
Q Consensus 721 ~~~l~~~cl~~dp~~RPs~ 739 (797)
+.++++.|+..||.+||+.
T Consensus 247 ~~~li~~lL~~dP~~R~s~ 265 (384)
T 4fr4_A 247 MVSLLKKLLEPNPDQRFSQ 265 (384)
T ss_dssp HHHHHHHHSCSSGGGSCCS
T ss_pred HHHHHHHHhcCCHhHhccc
Confidence 6788999999999999983
No 72
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.9e-37 Score=341.16 Aligned_cols=202 Identities=23% Similarity=0.287 Sum_probs=173.3
Q ss_pred HHHHHHHhcCCCccccccccCCcceeec-----ceEEEEEEEEec---cCCcchhHHHHHHHhhhccCCceeEeeeeeec
Q 040702 504 YLELFQATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQ---YGGAFKSFDIECGMMKRIRHRNLIKIISSCSN 575 (797)
Q Consensus 504 ~~~l~~~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~ 575 (797)
+.++....++|+..+.||+|+||.||++ ++.||+|++++. .....+.+.+|+.+++.++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3445556789999999999999999974 688999999764 23345678899999999999999999999999
Q ss_pred CCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCC
Q 040702 576 DDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMA 655 (797)
Q Consensus 576 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla 655 (797)
++..|+||||+++|+|.+++.... +++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~~--~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEecccee
Confidence 999999999999999999997653 899999999999999999999 899999999999999999999999999999
Q ss_pred ccCCccCccccccccccCcccccccccccCc----cchHHHHHHHhhhhhhhhccccccc
Q 040702 656 KPLLEEDQSLTQTQTLATIGYMAPDEIFSGE----MRLKCWVNDSLLISVMIVVDANLLI 711 (797)
Q Consensus 656 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~dv~s~~~~~~~~~~~~~~~~ 711 (797)
+...... .......+||+.|||||.+.... ++.++|+|++|+..++.+.+..++.
T Consensus 216 ~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~ 274 (410)
T 3v8s_A 216 MKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 274 (410)
T ss_dssp EECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTC
T ss_pred EeeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCC
Confidence 8664332 12334578999999999987655 8899999999999877666655543
No 73
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=5.2e-37 Score=332.74 Aligned_cols=227 Identities=20% Similarity=0.272 Sum_probs=191.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC------cchhHHHHHHHhhhccCCceeEeeeeeecCCeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG------AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 579 (797)
.++|...+.||+|+||.||++ ++.||||+++..... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 468999999999999999984 689999999876432 236789999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC----cEEEEeecCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM----VAHLSDFGMA 655 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~----~~kl~DFGla 655 (797)
|+||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 99999999999999997654 5899999999999999999999 89999999999999998776 7999999999
Q ss_pred ccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------h
Q 040702 656 KPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------K 715 (797)
Q Consensus 656 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~ 715 (797)
+...... .....+||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.... .
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 243 (361)
T 2yab_A 167 HEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243 (361)
T ss_dssp EECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHT
T ss_pred eEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhcc
Confidence 8764322 2345679999999999998899999999999998866555444432211 1
Q ss_pred hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 ~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......+++++.|+..||.+||++.|+++
T Consensus 244 ~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 244 QTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 22335678999999999999999988764
No 74
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.6e-37 Score=328.16 Aligned_cols=239 Identities=21% Similarity=0.286 Sum_probs=193.7
Q ss_pred hcCCCccccccccCCcceeec----ceEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
.++|+..+.||+|+||.||++ ++.||||+++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 478999999999999999985 58899999975532 224678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcc
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQS 664 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~ 664 (797)
|+++ ++.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-- 173 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV-- 173 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC--
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc--
Confidence 9975 888888776667999999999999999999999 9999999999999999999999999999998653222
Q ss_pred ccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhhh----------------------------
Q 040702 665 LTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREEK---------------------------- 715 (797)
Q Consensus 665 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~---------------------------- 715 (797)
.......||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..++.....
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence 22344678999999999876 5689999999999998665554443321100
Q ss_pred ------------------hhhcccccchhccccCCCCCCCChHHHHHhHHHHHHHhccccccccccCCcccccceeeeee
Q 040702 716 ------------------HLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELERGKVGITSVAAFPIVHHYLYRTVD 777 (797)
Q Consensus 716 ------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 777 (797)
.......++++.|+..||++|||+.|++ +|+||++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell-------------------------~hp~f~~~~ 308 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM-------------------------NHPYFKDLD 308 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHH-------------------------TSGGGTTSC
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHh-------------------------cCcccccCC
Confidence 0112345789999999999999987766 578888887
Q ss_pred eee
Q 040702 778 YTI 780 (797)
Q Consensus 778 ~~~ 780 (797)
++|
T Consensus 309 ~~i 311 (311)
T 3niz_A 309 PQI 311 (311)
T ss_dssp TTC
T ss_pred ccC
Confidence 764
No 75
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5e-37 Score=327.40 Aligned_cols=241 Identities=21% Similarity=0.224 Sum_probs=196.4
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|+..+.||+|+||.||++ ++.||+|++++.. ....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 368999999999999999974 6899999998652 23456788899999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+++|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 99999999999998765 4899999999999999999999 99999999999999999999999999999986532
Q ss_pred ccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh----------------hhhhcccccchh
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE----------------KHLMTKEQPMVR 726 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~ 726 (797)
.....+||+.|+|||.+.+..++.++|+|++|+..++.+.+..++.... ......+.++++
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~ 235 (318)
T 1fot_A 159 ---VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLS 235 (318)
T ss_dssp ---CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred ---ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 2234679999999999999999999999999999866665544432211 112234567788
Q ss_pred ccccCCCCCCCChHHHHHhHHHHHHHhccccccccccCCcccccceeeeeeeee
Q 040702 727 MGTDLSLGQFPASYSISKYLVYIRELERGKVGITSVAAFPIVHHYLYRTVDYTI 780 (797)
Q Consensus 727 ~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 780 (797)
.|+..||++||+. ....+.++++|+||++++|+.
T Consensus 236 ~lL~~dp~~R~~~--------------------~~~~~~~i~~hp~f~~~~~~~ 269 (318)
T 1fot_A 236 RLITRDLSQRLGN--------------------LQNGTEDVKNHPWFKEVVWEK 269 (318)
T ss_dssp HHTCSCTTTCTTS--------------------STTTTHHHHTSGGGSSCCHHH
T ss_pred HHhccCHHHcCCC--------------------cCCCHHHHhcCccccCCCHHH
Confidence 8888888888842 112234455677777777753
No 76
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.3e-36 Score=325.39 Aligned_cols=238 Identities=19% Similarity=0.196 Sum_probs=200.8
Q ss_pred CccCHHHHHHHhcC----------CCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCC
Q 040702 500 RRFTYLELFQATNR----------FSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHR 564 (797)
Q Consensus 500 ~~~~~~~l~~~~~~----------f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hp 564 (797)
..++++++..+++. |+..+.||+|+||.||++ ++.||||+++.......+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 56888998888864 677789999999999975 689999999877666667899999999999999
Q ss_pred ceeEeeeeeecCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCC
Q 040702 565 NLIKIISSCSNDDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN 644 (797)
Q Consensus 565 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~ 644 (797)
||+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 9999999999999999999999999999998754 4899999999999999999999 8999999999999999999
Q ss_pred CcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh-----------
Q 040702 645 MVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE----------- 713 (797)
Q Consensus 645 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~----------- 713 (797)
+.+||+|||+++....... ......||+.|+|||.+.++.++.++|+|++|+..+..+.+..++...
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 255 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD 255 (321)
T ss_dssp CCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred CcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 9999999999986543221 234567999999999999999999999999999886655544332211
Q ss_pred --------hhhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 714 --------EKHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 714 --------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.......+.++++.|++.||++||++.|+++
T Consensus 256 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 256 SPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp SSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1112334678899999999999999998875
No 77
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=330.92 Aligned_cols=241 Identities=23% Similarity=0.292 Sum_probs=196.9
Q ss_pred cCCCccccccccCCcceeecc--------eEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKDG--------MEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~~--------~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
++|...+.||+|+||.||++. ..||||+++.... ...+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 578888999999999999752 4599999975532 2346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999876667999999999999999999999 9999999999999999999999999999998764332
Q ss_pred cc-ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhccccc
Q 040702 663 QS-LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQP 723 (797)
Q Consensus 663 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~ 723 (797)
.. .......+|+.|+|||.+.+..++.++|+|++|+..+..+. +..++... +......+.+
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 285 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQ 285 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHH
Confidence 21 12234457889999999998999999999999999866554 33332211 1122345678
Q ss_pred chhccccCCCCCCCChHHHHHhHHHHHHHhcc
Q 040702 724 MVRMGTDLSLGQFPASYSISKYLVYIRELERG 755 (797)
Q Consensus 724 l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~ 755 (797)
+++.|++.||++||++.++++.|+.+.+.+..
T Consensus 286 li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 286 LMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999998765433
No 78
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-37 Score=336.22 Aligned_cols=240 Identities=24% Similarity=0.306 Sum_probs=201.3
Q ss_pred hcCCCccccccccCCcceeecc------------eEEEEEEEEeccC-CcchhHHHHHHHhhhc-cCCceeEeeeeeecC
Q 040702 511 TNRFSENNLIGRGGFGPVYKDG------------MEVAIKVFNLQYG-GAFKSFDIECGMMKRI-RHRNLIKIISSCSND 576 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~~------------~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 576 (797)
.++|...+.||+|+||.||++. ..||||+++.... ...+.+.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 4789999999999999999863 5799999975532 2346788999999999 899999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE
Q 040702 577 DFKALVLEYMPLGSLEKCLYSGN---------------YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 641 (797)
Q Consensus 577 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll 641 (797)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 99999999999999999997654 24899999999999999999999 8999999999999999
Q ss_pred cCCCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchhh------
Q 040702 642 DDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIREE------ 714 (797)
Q Consensus 642 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~~------ 714 (797)
+.++.+||+|||+|+...............||+.|+|||.+.+..++.++|+|++|+..+..+. +..++....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~ 304 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 304 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 9999999999999987654433334445668899999999999999999999999999865554 333322211
Q ss_pred -----------hhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHHh
Q 040702 715 -----------KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELE 753 (797)
Q Consensus 715 -----------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~ 753 (797)
......+.++++.||+.||++||++.|+++.|+.+....
T Consensus 305 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 305 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 112335678899999999999999999999999987664
No 79
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=8.8e-36 Score=322.87 Aligned_cols=305 Identities=28% Similarity=0.384 Sum_probs=193.2
Q ss_pred CCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCE
Q 040702 51 NLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSE 130 (797)
Q Consensus 51 ~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 130 (797)
.+++|+.|++++|++..+ | .+..+++|++|+|++|+++ .++. +..+++|++|+|++|.+++. ..|.++++|++
T Consensus 42 ~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~-~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~ 114 (347)
T 4fmz_A 42 ELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQIT-DISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRE 114 (347)
T ss_dssp HHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSE
T ss_pred hcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccc-cchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCE
Confidence 445555555555555442 2 2455555555555555554 3333 34555555555555555432 23555555555
Q ss_pred EEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEE
Q 040702 131 LGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFW 210 (797)
Q Consensus 131 L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~ 210 (797)
|+|++|+++++.+ +.++++|++|++++|......+ .+..+++|++|++++|.+....+
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~------~~~~l~~L~~L~l~~~~~~~~~~-------------- 172 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS------PLSNMTGLNYLTVTESKVKDVTP-------------- 172 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG------GGTTCTTCCEEECCSSCCCCCGG--------------
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCccccc------chhhCCCCcEEEecCCCcCCchh--------------
Confidence 5555555554332 5555555555555553322222 14444555555555555543322
Q ss_pred ccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCC
Q 040702 211 MDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLL 290 (797)
Q Consensus 211 L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 290 (797)
+..+++| ++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|.+
T Consensus 173 -------------~~~l~~L--~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l 233 (347)
T 4fmz_A 173 -------------IANLTDL--YSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKI 233 (347)
T ss_dssp -------------GGGCTTC--SEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred -------------hccCCCC--CEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCcc
Confidence 4444444 666666666654332 6677778888888887776544 67777888888888888
Q ss_pred CCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhh
Q 040702 291 TSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIG 370 (797)
Q Consensus 291 ~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 370 (797)
+.++. +..+++|++|++++|.+++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..|..++
T Consensus 234 ~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 308 (347)
T 4fmz_A 234 TDLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIG 308 (347)
T ss_dssp CCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHH
T ss_pred CCCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhh
Confidence 77765 66778888888888888753 3577788888888888888764 3577888888888888888877788888
Q ss_pred ccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCc
Q 040702 371 DLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLE 410 (797)
Q Consensus 371 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 410 (797)
.+++|++|++++|++++..| +..+++|+.|++++|+++
T Consensus 309 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 309 GLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp TCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 88888888888888887666 778888888888888775
No 80
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4e-37 Score=335.09 Aligned_cols=251 Identities=20% Similarity=0.274 Sum_probs=206.2
Q ss_pred cCccCHHHHHHHhcCCCccccccccCCcceeecc----------eEEEEEEEEeccC-CcchhHHHHHHHhhhc-cCCce
Q 040702 499 QRRFTYLELFQATNRFSENNLIGRGGFGPVYKDG----------MEVAIKVFNLQYG-GAFKSFDIECGMMKRI-RHRNL 566 (797)
Q Consensus 499 ~~~~~~~~l~~~~~~f~~~~~lg~G~~g~Vyk~~----------~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~Hpni 566 (797)
...+...+.....++|...+.||+|+||.||++. +.||||+++.... ...+.+.+|+++++++ +||||
T Consensus 9 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 88 (359)
T 3vhe_A 9 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 88 (359)
T ss_dssp GSCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred hCCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcce
Confidence 3455666666778999999999999999999863 7899999975432 2346789999999999 79999
Q ss_pred eEeeeeeecCC-eEEEEEEccCCCCHHHHHhcCCC---------------------------------------------
Q 040702 567 IKIISSCSNDD-FKALVLEYMPLGSLEKCLYSGNY--------------------------------------------- 600 (797)
Q Consensus 567 v~l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------- 600 (797)
+++++++.+.+ ..++||||+++|+|.+++.....
T Consensus 89 v~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 89 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp CCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 99999998765 48999999999999999976532
Q ss_pred --------------------CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCc
Q 040702 601 --------------------ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 601 --------------------~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~ 660 (797)
.+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 245 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence 1889999999999999999999 99999999999999999999999999999987654
Q ss_pred cCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh------------------hhhhhccc
Q 040702 661 EDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE------------------EKHLMTKE 721 (797)
Q Consensus 661 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~------------------~~~~~~~~ 721 (797)
...........||+.|+|||.+.+..++.++|+|++|+..+..+. +..++... +......+
T Consensus 246 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (359)
T 3vhe_A 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM 325 (359)
T ss_dssp CTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHH
T ss_pred cccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHH
Confidence 444334455678999999999999999999999999999866653 33332221 11123357
Q ss_pred ccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 722 QPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 722 ~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
.++++.|++.||.+||++.|+++.|+.+.+-
T Consensus 326 ~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 326 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 7889999999999999999999999987654
No 81
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6e-37 Score=331.22 Aligned_cols=219 Identities=21% Similarity=0.234 Sum_probs=187.1
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|+..+.||+|+||.||++ ++.||||++++.. ....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 368999999999999999974 6899999997653 23456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 99999999999998654 3899999999999999999999 999999999999999999999999999999865322
Q ss_pred ccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh----------------hhhhhcccccchh
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE----------------EKHLMTKEQPMVR 726 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~ 726 (797)
....+||+.|+|||.+.+..++.++|+|++|+..++.+.+..++... +......+.++++
T Consensus 195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~ 270 (350)
T 1rdq_E 195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270 (350)
T ss_dssp ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHH
T ss_pred ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 23467999999999999999999999999999986666554443221 1122345678889
Q ss_pred ccccCCCCCCCC
Q 040702 727 MGTDLSLGQFPA 738 (797)
Q Consensus 727 ~cl~~dp~~RPs 738 (797)
.|+..||.+||+
T Consensus 271 ~lL~~dp~~R~~ 282 (350)
T 1rdq_E 271 NLLQVDLTKRFG 282 (350)
T ss_dssp HHSCSCTTTCTT
T ss_pred HHhhcCHHhccC
Confidence 999999999997
No 82
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.8e-37 Score=326.69 Aligned_cols=239 Identities=24% Similarity=0.290 Sum_probs=191.2
Q ss_pred HHhcCCCccccccccCCcceeec---ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 509 QATNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 509 ~~~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
...++|+..+.||+|+||.||++ +..||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 34578999999999999999985 689999999765422 2457889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 584 EYMPLGSLEKCLYSGNY--ILDIFQGLNIMIDVASALEYLHFGYSVP--IIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~al~yLH~~~~~~--ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
||+++|+|.+++..... .+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 99999999999987543 4899999999999999999999 888 9999999999999999999999999998543
Q ss_pred ccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh------------------hhhhccc
Q 040702 660 EEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE------------------KHLMTKE 721 (797)
Q Consensus 660 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~------------------~~~~~~~ 721 (797)
.. ........||+.|+|||.+.+..++.++|+|++|+..+..+....++.... ......+
T Consensus 191 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 268 (309)
T 3p86_A 191 ST--FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQV 268 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHH
T ss_pred cc--ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHH
Confidence 22 122345679999999999999999999999999999866655444333211 1223356
Q ss_pred ccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 722 QPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 722 ~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
.++++.|++.||.+||++.++++.|+.+.+-
T Consensus 269 ~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 269 AAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 7899999999999999999999999887543
No 83
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.3e-37 Score=326.10 Aligned_cols=238 Identities=20% Similarity=0.294 Sum_probs=193.3
Q ss_pred hcCCCccccccccCCcceeec---------ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecC--CeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD---------GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSND--DFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~---------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~--~~~ 579 (797)
.++|+..+.||+|+||.||++ ++.||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 468999999999999999864 588999999765544557889999999999999999999998654 468
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
++||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999999887666899999999999999999999 8999999999999999999999999999998764
Q ss_pred ccCcc-ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh-------------------------
Q 040702 660 EEDQS-LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE------------------------- 713 (797)
Q Consensus 660 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~------------------------- 713 (797)
..... .......||..|+|||.+.+..++.++|+|++|+..+..+....+....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence 33221 1223445788899999999999999999999999875554432211111
Q ss_pred --------hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHH
Q 040702 714 --------EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRE 751 (797)
Q Consensus 714 --------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~ 751 (797)
+......+.++++.||+.||++||++.|+++.++.+.+
T Consensus 246 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 246 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 11223457789999999999999999999999988764
No 84
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.3e-37 Score=328.14 Aligned_cols=228 Identities=21% Similarity=0.248 Sum_probs=193.4
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
.++|...+.||+|+||.||++ ++.||||++...... ..+.+.+|+++++.++||||+++++++...+..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 468999999999999999974 689999999865432 3457889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 94 e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp CCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred ECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 9999999999997654 3899999999999999999999 9999999999999999999999999999998654322
Q ss_pred cccccccccCcccccccccccCccc-hHHHHHHHhhhhhhhhccccccchhhh----------------hhhcccccchh
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEMR-LKCWVNDSLLISVMIVVDANLLIREEK----------------HLMTKEQPMVR 726 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~dv~s~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~ 726 (797)
.....+||+.|+|||.+.+..+. .++|+|++|+..+..+.+..++..... .......++++
T Consensus 169 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 246 (328)
T 3fe3_A 169 --KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLK 246 (328)
T ss_dssp --GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred --ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 33556899999999999888775 899999999998666655544432111 12345678999
Q ss_pred ccccCCCCCCCChHHHHHh
Q 040702 727 MGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 727 ~cl~~dp~~RPs~~~i~~~ 745 (797)
.|+..||.+|||+.|+++.
T Consensus 247 ~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 247 RFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHCCSSTTTSCCHHHHTTC
T ss_pred HHCCCChhHCcCHHHHhcC
Confidence 9999999999999998763
No 85
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3e-36 Score=320.68 Aligned_cols=249 Identities=27% Similarity=0.388 Sum_probs=206.4
Q ss_pred ccCccCHHHHHHHhcCCCcc------ccccccCCcceeec---ceEEEEEEEEecc----CCcchhHHHHHHHhhhccCC
Q 040702 498 DQRRFTYLELFQATNRFSEN------NLIGRGGFGPVYKD---GMEVAIKVFNLQY----GGAFKSFDIECGMMKRIRHR 564 (797)
Q Consensus 498 ~~~~~~~~~l~~~~~~f~~~------~~lg~G~~g~Vyk~---~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~Hp 564 (797)
....|++.++..++++|... +.||+|+||.||++ ++.||||++.... ....+.+.+|+.++++++||
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 45689999999999999887 89999999999985 6899999997542 22346788999999999999
Q ss_pred ceeEeeeeeecCCeEEEEEEccCCCCHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEc
Q 040702 565 NLIKIISSCSNDDFKALVLEYMPLGSLEKCLYSG--NYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD 642 (797)
Q Consensus 565 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~ 642 (797)
||+++++++.+.+..++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEc
Confidence 9999999999999999999999999999998743 235899999999999999999999 89999999999999999
Q ss_pred CCCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------
Q 040702 643 DNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE-------- 714 (797)
Q Consensus 643 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------- 714 (797)
.++.+||+|||+++...............||+.|+|||.+. +.++.++|+|++|+..+..+.+..++....
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence 99999999999998654433332334567999999999765 568999999999998865555433332211
Q ss_pred -----------------------hhhhcccccchhccccCCCCCCCChHHHHHhHHHHH
Q 040702 715 -----------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIR 750 (797)
Q Consensus 715 -----------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~ 750 (797)
......+.++++.|++.||.+||++.++++.|+.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 247 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 111234567899999999999999999999998764
No 86
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.6e-37 Score=329.38 Aligned_cols=232 Identities=20% Similarity=0.252 Sum_probs=186.7
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
.++|+..+.||+|+||.||++ ++.||||++..... ...+.+.+|++++++++||||+++++++...+..|+|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 578999999999999999975 68999999976542 345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcc
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQS 664 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~ 664 (797)
|+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 89 ~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~- 163 (347)
T 3zgw_A 89 YCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD- 163 (347)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC-
Confidence 999999999997655 4899999999999999999999 89999999999999999999999999999986533221
Q ss_pred ccccccccCcccccccccccCcc-chHHHHHHHhhhhhhhhccccccchhhh----------------hhhcccccchhc
Q 040702 665 LTQTQTLATIGYMAPDEIFSGEM-RLKCWVNDSLLISVMIVVDANLLIREEK----------------HLMTKEQPMVRM 727 (797)
Q Consensus 665 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~dv~s~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~ 727 (797)
......+||+.|+|||.+.+..+ +.++|+|++|+..+..+.+..++..... .......++++.
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~ 243 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQ 243 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHH
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 22345679999999999988775 8999999999998666655444332111 123345678999
Q ss_pred cccCCCCCCCChHHHHHhHH
Q 040702 728 GTDLSLGQFPASYSISKYLV 747 (797)
Q Consensus 728 cl~~dp~~RPs~~~i~~~l~ 747 (797)
|+..||.+|||+.|+++.-.
T Consensus 244 ~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 244 MLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp HTCSSGGGSCCHHHHHTCHH
T ss_pred HcccCHhHCcCHHHHhcCcc
Confidence 99999999999999987643
No 87
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.7e-37 Score=338.28 Aligned_cols=240 Identities=22% Similarity=0.259 Sum_probs=197.4
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
..++|...+.||+|+||.||++ ++.||||+++.... ...+++.+|++++++++||||+++++++..++..|+||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3468899999999999999974 68899999875422 22457889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
||+++|+|.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999999876556899999999999999999999 99999999999999999999999999999986433211
Q ss_pred cccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchhh-----------------hhhhcccccch
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIREE-----------------KHLMTKEQPMV 725 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~~-----------------~~~~~~~~~l~ 725 (797)
........+++.|+|||.+..+.++.++|+|++|+..++.+. +..++.... ......+.+++
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 348 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLM 348 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 111122346778999999999999999999999999865553 333322211 11233567889
Q ss_pred hccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 726 RMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 726 ~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
+.||+.||++||++.++++.|+.+.+-
T Consensus 349 ~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 349 EQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 999999999999999999999988654
No 88
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2e-35 Score=320.02 Aligned_cols=307 Identities=26% Similarity=0.410 Sum_probs=241.0
Q ss_pred CCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCc
Q 040702 17 LGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSS 96 (797)
Q Consensus 17 ~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~ 96 (797)
+..+++|++|++++|.++ .+| .+..+++|++|++++|+++++.+ |.++++|++|+|++|.++ .+|
T Consensus 40 ~~~l~~L~~L~l~~~~i~---------~~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~-~~~-- 104 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA---------SIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT-DIS-- 104 (347)
T ss_dssp HHHHTTCSEEECCSSCCC---------CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCG--
T ss_pred chhcccccEEEEeCCccc---------cch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCccc-Cch--
Confidence 567899999999999843 444 38889999999999999998655 999999999999999998 665
Q ss_pred cccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCC
Q 040702 97 ADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLS 176 (797)
Q Consensus 97 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~ 176 (797)
.+..+++|++|+|++|.+++..+ +..+++|++|++++|...... ..+.++++|++|++++|.+...++ +.
T Consensus 105 ~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~-------~~ 174 (347)
T 4fmz_A 105 ALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP-------IA 174 (347)
T ss_dssp GGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG-------GG
T ss_pred HHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh-------hc
Confidence 36799999999999999986543 899999999999999765444 449999999999999999987764 67
Q ss_pred CCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCC
Q 040702 177 NCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAAL 256 (797)
Q Consensus 177 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L 256 (797)
.+++|+.|++++|++.++.+ +..++ +|+.|++++|.+. +..+ +..+++|
T Consensus 175 ~l~~L~~L~l~~n~l~~~~~--~~~l~-~L~~L~l~~n~l~--------------------------~~~~--~~~~~~L 223 (347)
T 4fmz_A 175 NLTDLYSLSLNYNQIEDISP--LASLT-SLHYFTAYVNQIT--------------------------DITP--VANMTRL 223 (347)
T ss_dssp GCTTCSEEECTTSCCCCCGG--GGGCT-TCCEEECCSSCCC--------------------------CCGG--GGGCTTC
T ss_pred cCCCCCEEEccCCccccccc--ccCCC-ccceeecccCCCC--------------------------CCch--hhcCCcC
Confidence 88999999999999986644 55555 5655555555554 3222 5556677
Q ss_pred cEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcc
Q 040702 257 FQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNN 336 (797)
Q Consensus 257 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 336 (797)
++|++++|++++..+ +..+++|++|++++|.++.++ .+..+++|+.|++++|.+++. ..+..+++|+.|++++|.
T Consensus 224 ~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~ 298 (347)
T 4fmz_A 224 NSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDIN-AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQ 298 (347)
T ss_dssp CEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSC
T ss_pred CEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCCh-hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCc
Confidence 777777777765543 667777777777777776663 466677888888888887754 357778888888888888
Q ss_pred cccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCC
Q 040702 337 FSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLS 386 (797)
Q Consensus 337 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 386 (797)
+++..+..|.++++|++|++++|++++..| +..+++|++|++++|.|+
T Consensus 299 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 299 LGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 887777888888888888888888886655 788888888888888875
No 89
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=8e-37 Score=333.59 Aligned_cols=240 Identities=21% Similarity=0.293 Sum_probs=188.5
Q ss_pred hcCCCccccccccCCcceeec--------ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD--------GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~--------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 581 (797)
.++|...+.||+|+||.||++ +..||||+++.... ...+++.+|+.++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 358999999999999999975 35699999975532 234679999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
||||+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999877667999999999999999999999 899999999999999999999999999999876433
Q ss_pred Ccc-ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcccc
Q 040702 662 DQS-LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQ 722 (797)
Q Consensus 662 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~ 722 (797)
... .......+|+.|+|||.+....++.++|+|++|+..++.+. +..++... +......+.
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~ 280 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 280 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHH
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHH
Confidence 211 11223346788999999999999999999999999865443 33322111 112234567
Q ss_pred cchhccccCCCCCCCChHHHHHhHHHHHHHh
Q 040702 723 PMVRMGTDLSLGQFPASYSISKYLVYIRELE 753 (797)
Q Consensus 723 ~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~ 753 (797)
+++..|++.||++||++.++++.|+.+.+.+
T Consensus 281 ~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred HHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 8899999999999999999999999986654
No 90
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4.2e-37 Score=334.80 Aligned_cols=224 Identities=23% Similarity=0.234 Sum_probs=179.0
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC---CcchhHHHHHHH-hhhccCCceeEeeeeeecCCeEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG---GAFKSFDIECGM-MKRIRHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~---~~~~~~~~E~~~-l~~l~Hpniv~l~~~~~~~~~~~l 581 (797)
.++|+..+.||+|+||.||++ ++.||||++++... .....+..|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 468999999999999999974 58899999986632 233456677776 577899999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
||||+++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.++++||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999997654 4889999999999999999999 999999999999999999999999999999864322
Q ss_pred CccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh----------------hhhhcccccch
Q 040702 662 DQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE----------------KHLMTKEQPMV 725 (797)
Q Consensus 662 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~ 725 (797)
. ......+||+.|+|||.+.+..++.++|+|++|+..++++.+..++.... ........+++
T Consensus 193 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li 270 (373)
T 2r5t_A 193 N--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLL 270 (373)
T ss_dssp C--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSSSCHHHHHHH
T ss_pred C--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Confidence 2 23455789999999999999999999999999999876665554432211 11233456788
Q ss_pred hccccCCCCCCCChH
Q 040702 726 RMGTDLSLGQFPASY 740 (797)
Q Consensus 726 ~~cl~~dp~~RPs~~ 740 (797)
+.|+..||.+||++.
T Consensus 271 ~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 271 EGLLQKDRTKRLGAK 285 (373)
T ss_dssp HHHTCSSGGGSTTTT
T ss_pred HHHcccCHHhCCCCC
Confidence 889999999999875
No 91
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.2e-36 Score=321.42 Aligned_cols=238 Identities=22% Similarity=0.313 Sum_probs=191.8
Q ss_pred hcCCCccccccccCCcceeec--ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEcc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD--GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEYM 586 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~--~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~~ 586 (797)
.++|...+.||+|+||.||++ ...+|+|+++..... ..+.+.+|++++++++||||+++++++.. +..++||||+
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e~~ 113 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWC 113 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred ccceEEEeEecCCCCeEEEEEEECCEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEecC
Confidence 468999999999999999986 467999998754322 34678899999999999999999998754 4578999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcccc
Q 040702 587 PLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLT 666 (797)
Q Consensus 587 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 666 (797)
++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..........
T Consensus 114 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~ 190 (307)
T 3lb7_A 114 EGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp SSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC---------
T ss_pred CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccccc
Confidence 999999999876667999999999999999999999 89999999999999999999999999999986543222233
Q ss_pred ccccccCcccccccccc---cCccchHHHHHHHhhhhhhhhccccccchhh----------------------hhhhccc
Q 040702 667 QTQTLATIGYMAPDEIF---SGEMRLKCWVNDSLLISVMIVVDANLLIREE----------------------KHLMTKE 721 (797)
Q Consensus 667 ~~~~~gt~~y~aPE~~~---~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~ 721 (797)
.....||+.|+|||.+. ...++.++|+|++|+..++.+.+..++.... ......+
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 270 (307)
T 3lb7_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAM 270 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHH
T ss_pred ccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHH
Confidence 44567999999999886 5678999999999999866655544432211 1123356
Q ss_pred ccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 722 QPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 722 ~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
.++++.|++.||++||++.|+++.++.++..
T Consensus 271 ~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 271 KRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 7889999999999999999999999887643
No 92
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=8.3e-37 Score=345.78 Aligned_cols=224 Identities=21% Similarity=0.270 Sum_probs=187.5
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|...+.||+|+||.||++ ++.||||++.+.. ....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 368999999999999999974 6899999997653 23456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 583 LEYMPLGSLEKCLYSGN---YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
|||++||+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999987643 25899999999999999999999 9999999999999999999999999999998764
Q ss_pred ccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhc
Q 040702 660 EEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMT 719 (797)
Q Consensus 660 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~ 719 (797)
.... .....+||+.|||||.+.+..++.++|+|++|+..++.+.+..++.... .....
T Consensus 341 ~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~ 418 (543)
T 3c4z_A 341 AGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSP 418 (543)
T ss_dssp TTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCH
T ss_pred CCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccCH
Confidence 3322 2344689999999999999999999999999999877666555443211 11233
Q ss_pred ccccchhccccCCCCCCCCh
Q 040702 720 KEQPMVRMGTDLSLGQFPAS 739 (797)
Q Consensus 720 ~~~~l~~~cl~~dp~~RPs~ 739 (797)
...++++.|+..||.+||++
T Consensus 419 ~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 419 ASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp HHHHHHHHHSCSSGGGSCCC
T ss_pred HHHHHHHHhccCCHhHCCCC
Confidence 45677788888888888864
No 93
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.4e-36 Score=316.80 Aligned_cols=236 Identities=22% Similarity=0.261 Sum_probs=198.5
Q ss_pred hcCCCccccccccCCcceeec----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEcc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEYM 586 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~~ 586 (797)
.++|+..+.||+|+||.||++ +..||||++..... ..+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 368899999999999999984 57899999975432 3467999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcccc
Q 040702 587 PLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLT 666 (797)
Q Consensus 587 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 666 (797)
++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 163 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 163 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc-ccc
Confidence 999999999877667899999999999999999999 9999999999999999999999999999998654322 122
Q ss_pred ccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchhh-----------------hhhhcccccchhcc
Q 040702 667 QTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIREE-----------------KHLMTKEQPMVRMG 728 (797)
Q Consensus 667 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~~-----------------~~~~~~~~~l~~~c 728 (797)
.....||+.|+|||.+....++.++|+|++|+..+..+. +..++.... ......+.++++.|
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 243 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 243 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHH
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHH
Confidence 344567889999999998999999999999999866554 333222111 11233566789999
Q ss_pred ccCCCCCCCChHHHHHhHHHHHH
Q 040702 729 TDLSLGQFPASYSISKYLVYIRE 751 (797)
Q Consensus 729 l~~dp~~RPs~~~i~~~l~~i~~ 751 (797)
++.||++||++.++++.++++.+
T Consensus 244 l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 244 WRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCCcccCcCHHHHHHHHHHHHH
Confidence 99999999999999999988764
No 94
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=338.31 Aligned_cols=205 Identities=21% Similarity=0.282 Sum_probs=175.3
Q ss_pred cCHHHHHHHhcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeee
Q 040702 502 FTYLELFQATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSC 573 (797)
Q Consensus 502 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~ 573 (797)
+.+.+.....++|+..+.||+|+||.||++ ++.||||++++.. ....+.+.+|..++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345555566789999999999999999974 6899999997642 23356789999999999999999999999
Q ss_pred ecCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeec
Q 040702 574 SNDDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFG 653 (797)
Q Consensus 574 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG 653 (797)
.+++..|+||||+++|+|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+|||++.++++||+|||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeech
Confidence 9999999999999999999999875546899999999999999999999 9999999999999999999999999999
Q ss_pred CCccCCccCccccccccccCcccccccccc-------cCccchHHHHHHHhhhhhhhhcccccc
Q 040702 654 MAKPLLEEDQSLTQTQTLATIGYMAPDEIF-------SGEMRLKCWVNDSLLISVMIVVDANLL 710 (797)
Q Consensus 654 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~dv~s~~~~~~~~~~~~~~~ 710 (797)
+++....... ......+||+.|||||.+. .+.++.++|+|++|+..++.+.+..++
T Consensus 208 la~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf 270 (412)
T 2vd5_A 208 SCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270 (412)
T ss_dssp TCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTT
T ss_pred hheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCC
Confidence 9987643322 2234468999999999987 467899999999999987766655544
No 95
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=336.13 Aligned_cols=241 Identities=20% Similarity=0.239 Sum_probs=197.3
Q ss_pred hcCCCccccccccCCcceeecc----------eEEEEEEEEecc-CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKDG----------MEVAIKVFNLQY-GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~~----------~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 579 (797)
.++|...+.||+|+||.||++. ..||||+++... ......+.+|+.++++++||||+++++++.+.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 3678999999999999999753 579999986442 22345788999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC---cEEEE
Q 040702 580 ALVLEYMPLGSLEKCLYSGN------YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM---VAHLS 650 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~---~~kl~ 650 (797)
++||||+++|+|.+++.... ..+++..++.++.||++||+||| +++|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997543 25899999999999999999999 99999999999999999555 59999
Q ss_pred eecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh----------------
Q 040702 651 DFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE---------------- 713 (797)
Q Consensus 651 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~---------------- 713 (797)
|||+|+...............||+.|+|||.+.++.++.++|+|++|+..++.+. +..++...
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~ 306 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 306 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 9999986533333333345678999999999999999999999999999866553 33222211
Q ss_pred -hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHHhc
Q 040702 714 -EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELER 754 (797)
Q Consensus 714 -~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~ 754 (797)
+......+.++++.||+.||++||++.++++.++.+.+.+.
T Consensus 307 ~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 307 PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 11223356789999999999999999999999998876543
No 96
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1e-36 Score=327.11 Aligned_cols=242 Identities=19% Similarity=0.214 Sum_probs=193.9
Q ss_pred hcCCCccccccccCCcceeecc---------eEEEEEEEEecc-CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKDG---------MEVAIKVFNLQY-GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKA 580 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~~---------~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 580 (797)
.++|+..+.||+|+||.||++. ..||+|.++... ....+.+.+|+.++++++||||++++++|..++ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 3679999999999999999852 246888775443 234578999999999999999999999998765 78
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCc
Q 040702 581 LVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~ 660 (797)
+|+||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999999999887667999999999999999999999 89999999999999999999999999999987654
Q ss_pred cCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchhh-----------------hhhhcccc
Q 040702 661 EDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIREE-----------------KHLMTKEQ 722 (797)
Q Consensus 661 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~~-----------------~~~~~~~~ 722 (797)
...........||+.|+|||.+.++.++.++|+|++|+..++.+. +..++.... ......+.
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVY 249 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHH
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHH
Confidence 433333445567889999999999999999999999999866554 433332211 11223466
Q ss_pred cchhccccCCCCCCCChHHHHHhHHHHHHHhccc
Q 040702 723 PMVRMGTDLSLGQFPASYSISKYLVYIRELERGK 756 (797)
Q Consensus 723 ~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~ 756 (797)
++++.||+.||++||++.++++.++.+...+...
T Consensus 250 ~li~~~l~~~p~~Rps~~ell~~l~~~~~~~~~~ 283 (327)
T 3poz_A 250 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 283 (327)
T ss_dssp HHHHHHTCSCGGGSCCHHHHHHHHHHHHTSHHHH
T ss_pred HHHHHHcCCChhhCCCHHHHHHHHHHHHhhhhhh
Confidence 7889999999999999999999999887654433
No 97
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-36 Score=330.38 Aligned_cols=228 Identities=18% Similarity=0.260 Sum_probs=193.4
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
.++|+..+.||+|+||.||++ ++.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 468999999999999999984 688999999866444456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC--CCcEEEEeecCCccCCccCc
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD--NMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~--~~~~kl~DFGla~~~~~~~~ 663 (797)
+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999999876656899999999999999999999 999999999999999974 5789999999998764332
Q ss_pred cccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhccccc
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMTKEQP 723 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~ 723 (797)
......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.... ......+.+
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 283 (387)
T 1kob_A 206 --IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283 (387)
T ss_dssp --CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHH
T ss_pred --ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHH
Confidence 2234579999999999999999999999999999866655544432211 112335678
Q ss_pred chhccccCCCCCCCChHHHHH
Q 040702 724 MVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 724 l~~~cl~~dp~~RPs~~~i~~ 744 (797)
+++.|+..||.+||++.|+++
T Consensus 284 li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 284 FIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp HHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCChhHCcCHHHHhh
Confidence 999999999999999998875
No 98
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.7e-35 Score=344.09 Aligned_cols=314 Identities=19% Similarity=0.210 Sum_probs=285.2
Q ss_pred CCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCC
Q 040702 100 RLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCK 179 (797)
Q Consensus 100 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~ 179 (797)
.+++++.|++++|.+..+.+..|.++++|++|+|++|.|+++.|.+|.++++|++|+|++|.|+.+++. .|.+++
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~ 123 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH-----VFQNVP 123 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCT
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHH-----HHcCCC
Confidence 468899999999999988778889999999999999999999999999999999999999999999886 388999
Q ss_pred CCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEE
Q 040702 180 YLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQL 259 (797)
Q Consensus 180 ~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 259 (797)
+|++|+|++|.++++++..|.+++ +|+.|++++|.+++..|..|+++++| ++|++++|.+++.. +..+++|+.|
T Consensus 124 ~L~~L~L~~n~l~~l~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L--~~L~L~~N~l~~~~---~~~l~~L~~L 197 (597)
T 3oja_B 124 LLTVLVLERNDLSSLPRGIFHNTP-KLTTLSMSNNNLERIEDDTFQATTSL--QNLQLSSNRLTHVD---LSLIPSLFHA 197 (597)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCBCCTTTTTTCTTC--CEEECTTSCCSBCC---GGGCTTCSEE
T ss_pred CCCEEEeeCCCCCCCCHHHhccCC-CCCEEEeeCCcCCCCChhhhhcCCcC--cEEECcCCCCCCcC---hhhhhhhhhh
Confidence 999999999999988888889988 89999999999999999999999998 99999999999764 5567899999
Q ss_pred EccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCccccc
Q 040702 260 DLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSC 339 (797)
Q Consensus 260 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 339 (797)
++++|.++++ ...++|+.|++++|.++.+|..+. ++|+.|++++|.+++ +..+..+++|+.|+|++|.+++
T Consensus 198 ~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~~--~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~ 268 (597)
T 3oja_B 198 NVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPVN--VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEK 268 (597)
T ss_dssp ECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSCC--SCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCE
T ss_pred hcccCccccc-----cCCchhheeeccCCcccccccccC--CCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCC
Confidence 9999999864 344689999999999998877553 689999999999996 4678999999999999999999
Q ss_pred ccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCcccCCCCCCC
Q 040702 340 VIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGEIPREGPF 419 (797)
Q Consensus 340 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 419 (797)
..|..|.++++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|++++.. ...+
T Consensus 269 ~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~ 344 (597)
T 3oja_B 269 IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTH 344 (597)
T ss_dssp EESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTT
T ss_pred CCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC--hhhc
Confidence 999999999999999999999995 5777788999999999999999 67888999999999999999998764 4567
Q ss_pred CCCCcccccCCccccCCC
Q 040702 420 RNLSAESFKGNELLCGMP 437 (797)
Q Consensus 420 ~~l~~~~~~~n~~~c~~~ 437 (797)
..+..+++.+|++.|.+.
T Consensus 345 ~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 345 HTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp CCCSEEECCSSCEEHHHH
T ss_pred CCCCEEEeeCCCCCChhH
Confidence 889999999999998753
No 99
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.4e-36 Score=344.56 Aligned_cols=222 Identities=21% Similarity=0.261 Sum_probs=186.8
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|...+.||+|+||.||++ ++.||||++.+.. ......+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999974 6899999997652 33456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 583 LEYMPLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
|||++||+|.+++..... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 999999999999976543 5899999999999999999999 899999999999999999999999999999876433
Q ss_pred CccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhccc
Q 040702 662 DQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMTKE 721 (797)
Q Consensus 662 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~ 721 (797)
. .....+||+.|||||.+.+..++.++|+|++|+..++.+.+..++.... .......
T Consensus 340 ~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~ 416 (576)
T 2acx_A 340 Q---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQA 416 (576)
T ss_dssp C---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred c---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHH
Confidence 2 2344689999999999999999999999999999876666554443211 1122345
Q ss_pred ccchhccccCCCCCCCC
Q 040702 722 QPMVRMGTDLSLGQFPA 738 (797)
Q Consensus 722 ~~l~~~cl~~dp~~RPs 738 (797)
.++++.|+..||.+||+
T Consensus 417 ~dLI~~lL~~dP~~R~g 433 (576)
T 2acx_A 417 RSLCSQLLCKDPAERLG 433 (576)
T ss_dssp HHHHHHHTCSSGGGSTT
T ss_pred HHHHHHhccCCHHHcCC
Confidence 67788888888888884
No 100
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5.5e-37 Score=329.12 Aligned_cols=223 Identities=21% Similarity=0.287 Sum_probs=176.1
Q ss_pred hcCCCccccccccCCcceee--------cceEEEEEEEEecc----CCcchhHHHHHHHhhhccCCceeEeeeeeecCCe
Q 040702 511 TNRFSENNLIGRGGFGPVYK--------DGMEVAIKVFNLQY----GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDF 578 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk--------~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 578 (797)
.++|+..+.||+|+||.||+ .++.||||+++... ......+.+|+.++++++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46899999999999999995 35789999997542 2234567889999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccC
Q 040702 579 KALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 658 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~ 658 (797)
.|+||||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999997654 4889999999999999999999 899999999999999999999999999999854
Q ss_pred CccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh----------------hhhhcccc
Q 040702 659 LEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE----------------KHLMTKEQ 722 (797)
Q Consensus 659 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 722 (797)
..... ......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.... ......+.
T Consensus 172 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 249 (327)
T 3a62_A 172 IHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEAR 249 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTSCHHHH
T ss_pred ccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 32221 2345679999999999999999999999999999866665554433211 11233556
Q ss_pred cchhccccCCCCCCCCh
Q 040702 723 PMVRMGTDLSLGQFPAS 739 (797)
Q Consensus 723 ~l~~~cl~~dp~~RPs~ 739 (797)
++++.|+..||.+||++
T Consensus 250 ~li~~~L~~dp~~R~~~ 266 (327)
T 3a62_A 250 DLLKKLLKRNAASRLGA 266 (327)
T ss_dssp HHHHHHSCSCGGGSTTS
T ss_pred HHHHHHHhcCHhhccCC
Confidence 78888888888888853
No 101
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-36 Score=321.90 Aligned_cols=229 Identities=17% Similarity=0.199 Sum_probs=194.5
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
.++|...+.||+|+||.||++ +..||+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999984 6899999987442 2345788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC--CCcEEEEeecCCccCCccCc
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD--NMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~--~~~~kl~DFGla~~~~~~~~ 663 (797)
+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999999999876656899999999999999999999 999999999999999987 7899999999998764332
Q ss_pred cccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhccccc
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMTKEQP 723 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~ 723 (797)
......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.... ......+.+
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T 1tki_A 159 --NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp --EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHH
T ss_pred --ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHH
Confidence 2344679999999999998889999999999998866555443332111 123445678
Q ss_pred chhccccCCCCCCCChHHHHHhH
Q 040702 724 MVRMGTDLSLGQFPASYSISKYL 746 (797)
Q Consensus 724 l~~~cl~~dp~~RPs~~~i~~~l 746 (797)
+++.|+..||.+|||+.|+++.-
T Consensus 237 li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 237 FVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHcCCChhHCcCHHHHhcCh
Confidence 99999999999999999998854
No 102
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=7.2e-36 Score=321.14 Aligned_cols=236 Identities=19% Similarity=0.220 Sum_probs=198.0
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
.++|...+.||+|+||.||++ ++.||||++.... ..+.+.+|+++++++ +||||+++++++..++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 367999999999999999975 6899999987553 246799999999999 89999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCc-----EEEEeecCCccCC
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV-----AHLSDFGMAKPLL 659 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~-----~kl~DFGla~~~~ 659 (797)
|+ +|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++...
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 89999999876556999999999999999999999 899999999999999998887 9999999998754
Q ss_pred ccCccc-----cccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhhh-------------------
Q 040702 660 EEDQSL-----TQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREEK------------------- 715 (797)
Q Consensus 660 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~------------------- 715 (797)
...... ......||+.|+|||.+.+..++.++|+|++|+..++.+.+..++.....
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 241 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI 241 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH
Confidence 332211 12456899999999999999999999999999998666655444332100
Q ss_pred ----hhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 716 ----HLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 716 ----~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
...+.+.++++.|++.||.+||++.++.+.++.+.+-
T Consensus 242 ~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 242 EVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 0022677889999999999999999999999876544
No 103
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9e-37 Score=341.96 Aligned_cols=227 Identities=21% Similarity=0.231 Sum_probs=179.7
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEec---cCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQ---YGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|+..+.||+|+||.||++ ++.||||+++.. .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 468999999999999999974 689999999865 223346778899999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYS-VPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~-~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
|||+++|+|.+++.... .+++..+..++.|++.||+||| + ++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999987654 4899999999999999999999 7 89999999999999999999999999999864322
Q ss_pred CccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh----------------hhhhcccccch
Q 040702 662 DQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE----------------KHLMTKEQPMV 725 (797)
Q Consensus 662 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~ 725 (797)
. ......+||+.|||||.+.+..++.++|+|++|+..++.+.+..++.... ......+.+++
T Consensus 303 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li 380 (446)
T 4ejn_A 303 G--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLL 380 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred C--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence 2 23345789999999999999999999999999999866665544432211 12233567888
Q ss_pred hccccCCCCCCC-----ChHHHH
Q 040702 726 RMGTDLSLGQFP-----ASYSIS 743 (797)
Q Consensus 726 ~~cl~~dp~~RP-----s~~~i~ 743 (797)
+.|++.||.+|| ++.|++
T Consensus 381 ~~~L~~dP~~R~~~~~~t~~ell 403 (446)
T 4ejn_A 381 SGLLKKDPKQRLGGGSEDAKEIM 403 (446)
T ss_dssp HHHTCSSTTTSTTCSTTTHHHHH
T ss_pred HHHcccCHHHhCCCCCCCHHHHH
Confidence 899999999999 655554
No 104
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.7e-36 Score=324.65 Aligned_cols=231 Identities=19% Similarity=0.242 Sum_probs=191.1
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
.++|+..+.||+|+||.||++ ++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..|+|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999985 68899999975532 334678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcc
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQS 664 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~ 664 (797)
|+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+......
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999887654 4899999999999999999999 999999999999999999999999999999865433333
Q ss_pred ccccccccCcccccccccccCcc-chHHHHHHHhhhhhhhhccccccchhh-------------------hhhhcccccc
Q 040702 665 LTQTQTLATIGYMAPDEIFSGEM-RLKCWVNDSLLISVMIVVDANLLIREE-------------------KHLMTKEQPM 724 (797)
Q Consensus 665 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~l 724 (797)
.......||+.|+|||.+.+..+ +.++|+|++|+..+..+.+..++.... ......+.++
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHH
Confidence 33445689999999999987776 789999999999866655544432211 1223355678
Q ss_pred hhccccCCCCCCCChHHHHHh
Q 040702 725 VRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 725 ~~~cl~~dp~~RPs~~~i~~~ 745 (797)
++.|++.||++||++.|+++.
T Consensus 242 i~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 242 LHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp HHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHccCChhhCcCHHHHhhC
Confidence 999999999999999998764
No 105
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.3e-36 Score=320.84 Aligned_cols=246 Identities=22% Similarity=0.283 Sum_probs=178.7
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
..++|+..+.||+|+||.||++ ++.||||+++.... ...+.+.+|++++++++||||+++++++..++..|+||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 3568999999999999999975 68999999986543 34567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccC
Q 040702 584 EYMPLGSLEKCLYSGN-----YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 658 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~ 658 (797)
||++ |+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9998 59999886432 24889999999999999999999 899999999999999999999999999999865
Q ss_pred CccCccccccccccCcccccccccccC-ccchHHHHHHHhhhhhhhhccccccchhhh----------------------
Q 040702 659 LEEDQSLTQTQTLATIGYMAPDEIFSG-EMRLKCWVNDSLLISVMIVVDANLLIREEK---------------------- 715 (797)
Q Consensus 659 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~---------------------- 715 (797)
..... ......||+.|+|||.+.+. .++.++|+|++|+..+..+.+..++.....
T Consensus 159 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 159 GIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp TSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGG
T ss_pred CCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhh
Confidence 32221 23445799999999998764 589999999999988665554443321110
Q ss_pred ----------------------------hhhcccccchhccccCCCCCCCChHHHHHhHHHHHHHhccccccccccCCcc
Q 040702 716 ----------------------------HLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELERGKVGITSVAAFPI 767 (797)
Q Consensus 716 ----------------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~~~~~~~~~~~~ 767 (797)
.....+.++++.|+..||++||++.|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l------------------------ 292 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQAL------------------------ 292 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHT------------------------
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHh------------------------
Confidence 1122455788889999999999976654
Q ss_pred cccceeeeeeeeecccchh
Q 040702 768 VHHYLYRTVDYTISSSTFN 786 (797)
Q Consensus 768 ~~~~~f~~~~~~~~~~~~~ 786 (797)
+|+||+...|.+..++-|
T Consensus 293 -~hp~f~~~~~~~~~~~~~ 310 (317)
T 2pmi_A 293 -HHPWFAEYYHHASMGGSR 310 (317)
T ss_dssp -TSGGGGGGCC--------
T ss_pred -CChhhhcccchhhccccc
Confidence 467777777766555443
No 106
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.9e-35 Score=311.52 Aligned_cols=236 Identities=15% Similarity=0.135 Sum_probs=198.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
.++|...+.||+|+||.||++ ++.||||++.... ..+.+.+|+++++++ +|+|++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 357999999999999999975 6899999986543 346789999999999 79999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCc-----EEEEeecCCccCC
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV-----AHLSDFGMAKPLL 659 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~-----~kl~DFGla~~~~ 659 (797)
|+ +++|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 89999999876666999999999999999999999 999999999999999987776 9999999998764
Q ss_pred ccCcc-----ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------
Q 040702 660 EEDQS-----LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE-------------------- 714 (797)
Q Consensus 660 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------------- 714 (797)
..... .......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++....
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 242 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH
Confidence 33221 12345679999999999999999999999999999866555444432210
Q ss_pred ----hhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 715 ----KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 715 ----~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
......+.++++.|++.||++||++.++.+.++.+.+-
T Consensus 243 ~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 243 RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 12234677899999999999999999999999987653
No 107
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.6e-36 Score=320.67 Aligned_cols=231 Identities=23% Similarity=0.310 Sum_probs=186.1
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCC-------
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDD------- 577 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~------- 577 (797)
.++|+..+.||+|+||.||++ ++.||||+++.... ...+.+.+|++++++++||||++++++|.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 468999999999999999974 68899999986543 34578999999999999999999999986543
Q ss_pred --------------------------------------------------eEEEEEEccCCCCHHHHHhcCCC--CCCHH
Q 040702 578 --------------------------------------------------FKALVLEYMPLGSLEKCLYSGNY--ILDIF 605 (797)
Q Consensus 578 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~--~l~~~ 605 (797)
..++||||+++|+|.+++..... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 37999999999999999987543 45667
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcc----------ccccccccCcc
Q 040702 606 QGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQS----------LTQTQTLATIG 675 (797)
Q Consensus 606 ~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~gt~~ 675 (797)
.++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++........ .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999 999999999999999999999999999999876543211 12244579999
Q ss_pred cccccccccCccchHHHHHHHhhhhhhhhccccccch---------------hhhhhhcccccchhccccCCCCCCCChH
Q 040702 676 YMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIR---------------EEKHLMTKEQPMVRMGTDLSLGQFPASY 740 (797)
Q Consensus 676 y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~~cl~~dp~~RPs~~ 740 (797)
|+|||.+.+..++.++|+|++|+..+..+........ ..........++++.|++.||++||++.
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 321 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEAT 321 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHH
Confidence 9999999999999999999999987555543222111 1112234557889999999999999998
Q ss_pred HHHH
Q 040702 741 SISK 744 (797)
Q Consensus 741 ~i~~ 744 (797)
|+++
T Consensus 322 ~~l~ 325 (332)
T 3qd2_B 322 DIIE 325 (332)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8874
No 108
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.6e-36 Score=322.84 Aligned_cols=228 Identities=23% Similarity=0.299 Sum_probs=191.8
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|...+.||+|+||.||++ ++.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 368999999999999999974 5899999997642 23356789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+ +|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++......
T Consensus 88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 679988887654 4899999999999999999999 8999999999999999999999999999998654332
Q ss_pred ccccccccccCcccccccccccCcc-chHHHHHHHhhhhhhhhccccccchh----------------hhhhhcccccch
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEM-RLKCWVNDSLLISVMIVVDANLLIRE----------------EKHLMTKEQPMV 725 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~dv~s~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~ 725 (797)
.....+||+.|+|||.+.+..+ +.++|+|++|+..+..+.+..++... +......+.+++
T Consensus 163 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li 239 (336)
T 3h4j_B 163 ---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLI 239 (336)
T ss_dssp ---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHH
T ss_pred ---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence 2345679999999999988776 68999999999986665554433321 112334567899
Q ss_pred hccccCCCCCCCChHHHHHhH
Q 040702 726 RMGTDLSLGQFPASYSISKYL 746 (797)
Q Consensus 726 ~~cl~~dp~~RPs~~~i~~~l 746 (797)
+.|+..||.+|||+.|+++.-
T Consensus 240 ~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 240 RRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp HTTSCSSGGGSCCHHHHTTCH
T ss_pred HHHcCCChhHCcCHHHHHhCh
Confidence 999999999999999998753
No 109
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-36 Score=328.46 Aligned_cols=241 Identities=23% Similarity=0.325 Sum_probs=198.0
Q ss_pred HHhcCCCccccccccCCcceeecc----------eEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCC
Q 040702 509 QATNRFSENNLIGRGGFGPVYKDG----------MEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDD 577 (797)
Q Consensus 509 ~~~~~f~~~~~lg~G~~g~Vyk~~----------~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~ 577 (797)
...++|...+.||+|+||.||++. +.||||+++.... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 346789999999999999999852 7899999975532 23467899999999999999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCC
Q 040702 578 FKALVLEYMPLGSLEKCLYSGN-----------------------YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDL 634 (797)
Q Consensus 578 ~~~lv~e~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDl 634 (797)
..|+||||+++|+|.+++.... ..+++.+++.++.||++||+||| +++|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 9999999999999999997642 35899999999999999999999 999999999
Q ss_pred CCCceEEcCCCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh
Q 040702 635 KPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE 713 (797)
Q Consensus 635 kp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~ 713 (797)
||+||+++.++.+||+|||+++...............||+.|+|||.+.++.++.++|+|++|+..+..+. +..++...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999986543332233345678999999999999999999999999999866554 33222211
Q ss_pred -----------------hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 714 -----------------EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 714 -----------------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
+......+.++++.|++.||++||++.++++.|+.+.+-
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 281 AHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred ChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 112233567899999999999999999999999886544
No 110
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.4e-36 Score=320.36 Aligned_cols=238 Identities=22% Similarity=0.309 Sum_probs=198.7
Q ss_pred hcCCCccccccccCCcceeec----------ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD----------GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~----------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 579 (797)
.++|...+.||+|+||.||++ +..||||+++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 478999999999999999985 27899999875432 2346788999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCC-----------------------CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNY-----------------------ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKP 636 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~-----------------------~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp 636 (797)
++||||+++|+|.+++..... .+++..++.++.|+++||+||| +++|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 999999999999999976432 3889999999999999999999 89999999999
Q ss_pred CceEEcCCCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh--
Q 040702 637 SNVLLDDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-- 713 (797)
Q Consensus 637 ~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-- 713 (797)
+||+++.++.+||+|||+++...............+|+.|+|||.+.+..++.++|+|++|+..+..+. +..++...
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654433333445568899999999999999999999999999866554 33322211
Q ss_pred ---------------hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHH
Q 040702 714 ---------------EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRE 751 (797)
Q Consensus 714 ---------------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~ 751 (797)
+......+.++++.|++.||++||++.++++.++.+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11223456789999999999999999999999988754
No 111
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.7e-36 Score=332.59 Aligned_cols=229 Identities=18% Similarity=0.264 Sum_probs=191.8
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
..++|+..+.||+|+||.||++ ++.||+|++..... ...+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4578999999999999999974 68999999986532 2345788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEc---CCCcEEEEeecCCccCC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD---DNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~---~~~~~kl~DFGla~~~~ 659 (797)
|||+++|+|.+.+.... .+++..+..++.||+.||+||| +.+|+||||||+||+++ .++.+||+|||+|+...
T Consensus 89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999988765 4899999999999999999999 99999999999999998 46789999999998664
Q ss_pred ccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhc
Q 040702 660 EEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMT 719 (797)
Q Consensus 660 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~ 719 (797)
.... ......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.... .....
T Consensus 165 ~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 242 (444)
T 3soa_A 165 GEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP 242 (444)
T ss_dssp TTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCH
T ss_pred CCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCH
Confidence 3322 2345689999999999998899999999999999866555444332111 12234
Q ss_pred ccccchhccccCCCCCCCChHHHHH
Q 040702 720 KEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 720 ~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.+.++++.|++.||++||++.|+++
T Consensus 243 ~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 243 EAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHcCCChhHCCCHHHHhc
Confidence 5678999999999999999999887
No 112
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.2e-36 Score=313.76 Aligned_cols=236 Identities=22% Similarity=0.227 Sum_probs=197.6
Q ss_pred hcCCCccccccccCCcceeec----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEcc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEYM 586 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~~ 586 (797)
.++|+..+.||+|+||.||++ +..||||+++.... ..+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 468999999999999999975 57899999975543 3467899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcccc
Q 040702 587 PLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLT 666 (797)
Q Consensus 587 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 666 (797)
++|+|.+++......+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVS 161 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-EEE
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh-hhc
Confidence 999999999876556899999999999999999999 8999999999999999999999999999998654332 222
Q ss_pred ccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchhh-----------------hhhhcccccchhcc
Q 040702 667 QTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIREE-----------------KHLMTKEQPMVRMG 728 (797)
Q Consensus 667 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~~-----------------~~~~~~~~~l~~~c 728 (797)
.....+|+.|+|||.+.+..++.++|+|++|+..+..+. +..++.... ......+.++++.|
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 241 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSC 241 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHT
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHH
Confidence 344557788999999998899999999999998865554 333322111 11233567899999
Q ss_pred ccCCCCCCCChHHHHHhHHHHHH
Q 040702 729 TDLSLGQFPASYSISKYLVYIRE 751 (797)
Q Consensus 729 l~~dp~~RPs~~~i~~~l~~i~~ 751 (797)
++.||++||++.++++.++.+++
T Consensus 242 l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 242 WHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp TCSSGGGSCCHHHHHHHHGGGCC
T ss_pred cCCChhhCcCHHHHHHHHHHhhh
Confidence 99999999999999998877643
No 113
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=318.87 Aligned_cols=227 Identities=20% Similarity=0.265 Sum_probs=191.6
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC------cchhHHHHHHHhhhccCCceeEeeeeeecCCeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG------AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 579 (797)
.++|...+.||+|+||.||++ +..||||+++..... ..+.+.+|+.++++++||||+++++++.+++..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 467999999999999999984 689999999865322 246789999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC----cEEEEeecCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM----VAHLSDFGMA 655 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~----~~kl~DFGla 655 (797)
++||||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 99999999999999997654 4899999999999999999999 99999999999999999877 8999999999
Q ss_pred ccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh--------------------hh
Q 040702 656 KPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE--------------------EK 715 (797)
Q Consensus 656 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~--------------------~~ 715 (797)
+...... ......||+.|+|||.+....++.++|+|++|+..+..+.+..++... ..
T Consensus 166 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (326)
T 2y0a_A 166 HKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242 (326)
T ss_dssp EECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHT
T ss_pred eECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccc
Confidence 8664322 234467999999999998889999999999999886655544433211 11
Q ss_pred hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 ~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.....+.++++.|+..||++||++.|+++
T Consensus 243 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22335668899999999999999999876
No 114
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3e-36 Score=317.68 Aligned_cols=232 Identities=21% Similarity=0.256 Sum_probs=195.7
Q ss_pred hcCCCccccccccCCcceeecc------------eEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCe
Q 040702 511 TNRFSENNLIGRGGFGPVYKDG------------MEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDF 578 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~~------------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 578 (797)
.++|...+.||+|+||.||++. ..||+|++........+.+.+|+.++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 4689999999999999999852 5699999977665666789999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCc--------EEEE
Q 040702 579 KALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV--------AHLS 650 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~--------~kl~ 650 (797)
.++||||+++|+|.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999887666899999999999999999999 999999999999999998876 9999
Q ss_pred eecCCccCCccCccccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhcc-ccccchh---------------
Q 040702 651 DFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVD-ANLLIRE--------------- 713 (797)
Q Consensus 651 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~-~~~~~~~--------------- 713 (797)
|||+++..... ....||+.|+|||.+.+ ..++.++|+|++|+..+..+.. ..+....
T Consensus 164 Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (289)
T 4fvq_A 164 DPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQL 237 (289)
T ss_dssp CCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC
T ss_pred cCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCC
Confidence 99999754321 23458999999999987 6789999999999998666552 2222111
Q ss_pred hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHH
Q 040702 714 EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRE 751 (797)
Q Consensus 714 ~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~ 751 (797)
+......+.++++.|++.||++||++.++++.++.+..
T Consensus 238 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 238 PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 11223467789999999999999999999998877643
No 115
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.9e-36 Score=317.50 Aligned_cols=234 Identities=22% Similarity=0.335 Sum_probs=190.4
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC---cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG---AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~---~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|+..+.||+|+||.||++ +..||+|++...... ..+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 367999999999999999975 588999999765332 235788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999997654 4899999999999999999999 9999999999999999999999999999998654322
Q ss_pred ccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh---------------------hhhhccc
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE---------------------KHLMTKE 721 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~ 721 (797)
........||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.... .+....+
T Consensus 166 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (294)
T 4eqm_A 166 -LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSL 244 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHH
T ss_pred -ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHH
Confidence 122344679999999999999999999999999999866655544432211 1233457
Q ss_pred ccchhccccCCCCCCC-ChHHHHHhHHHH
Q 040702 722 QPMVRMGTDLSLGQFP-ASYSISKYLVYI 749 (797)
Q Consensus 722 ~~l~~~cl~~dp~~RP-s~~~i~~~l~~i 749 (797)
.+++.+|++.||.+|| ++.++.+.++.+
T Consensus 245 ~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 245 SNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred HHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 7899999999999999 778888777654
No 116
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.4e-36 Score=322.63 Aligned_cols=240 Identities=20% Similarity=0.310 Sum_probs=196.8
Q ss_pred HhcCCCccccccccCCcceeec----------ceEEEEEEEEecc-CCcchhHHHHHHHhhhc-cCCceeEeeeeeecCC
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD----------GMEVAIKVFNLQY-GGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDD 577 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~----------~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 577 (797)
..++|...+.||+|+||.||++ +..||||+++... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 4578999999999999999975 2579999997543 33457899999999999 8999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHhcCCC----------------------CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCC
Q 040702 578 FKALVLEYMPLGSLEKCLYSGNY----------------------ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLK 635 (797)
Q Consensus 578 ~~~lv~e~~~~g~L~~~l~~~~~----------------------~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlk 635 (797)
..++||||+++|+|.+++..... .+++..++.++.|++.||+||| +++|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 99999999999999999976542 3789999999999999999999 8999999999
Q ss_pred CCceEEcCCCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-
Q 040702 636 PSNVLLDDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE- 713 (797)
Q Consensus 636 p~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~- 713 (797)
|+||+++.++.+||+|||+++...............||+.|+|||.+.++.++.++|+|++|+..+..+. +..++...
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987654433333445668899999999999999999999999999866553 33332221
Q ss_pred -----------------hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 714 -----------------EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 714 -----------------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
+......+.++++.|++.||.+||++.++++.++.+...
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 280 VDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp CSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 111234567789999999999999999999999876443
No 117
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3.7e-36 Score=351.88 Aligned_cols=246 Identities=20% Similarity=0.190 Sum_probs=202.3
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEec---cCCcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQ---YGGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKA 580 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~ 580 (797)
..++|+..+.||+|+||.||++ ++.||||++++. .....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999974 578999999864 234456788899999988 6999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCc
Q 040702 581 LVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~ 660 (797)
+||||+++|+|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999998754 4899999999999999999999 99999999999999999999999999999986432
Q ss_pred cCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh----------------hhhhcccccc
Q 040702 661 EDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE----------------KHLMTKEQPM 724 (797)
Q Consensus 661 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~l 724 (797)
.. ......+||+.|||||.+.+..|+.++|+|++|+..++++.+..++.... ........++
T Consensus 495 ~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 572 (674)
T 3pfq_A 495 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAI 572 (674)
T ss_dssp TT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTSCHHHHHH
T ss_pred CC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHH
Confidence 22 23456789999999999999999999999999999877666555443321 1223456678
Q ss_pred hhccccCCCCCCCChHHHHHhHHHHHHHhccccccccccCCcccccceeeeeeeeec
Q 040702 725 VRMGTDLSLGQFPASYSISKYLVYIRELERGKVGITSVAAFPIVHHYLYRTVDYTIS 781 (797)
Q Consensus 725 ~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 781 (797)
++.|+..||++||++. +..+.++++|+||++++|+..
T Consensus 573 i~~lL~~dP~~R~~~~--------------------~~~~~ei~~h~ff~~i~w~~l 609 (674)
T 3pfq_A 573 CKGLMTKHPGKRLGCG--------------------PEGERDIKEHAFFRYIDWEKL 609 (674)
T ss_dssp HHHHSCSSSTTCTTCS--------------------TTHHHHHHSSGGGSSCCHHHH
T ss_pred HHHHccCCHHHCCCCC--------------------CCcHHHHhcCccccCCCHHHH
Confidence 8888888888888752 122345567888888888743
No 118
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.1e-36 Score=328.83 Aligned_cols=231 Identities=15% Similarity=0.172 Sum_probs=190.4
Q ss_pred hcCCCcccccccc--CCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEE
Q 040702 511 TNRFSENNLIGRG--GFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 511 ~~~f~~~~~lg~G--~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 581 (797)
.++|+..+.||+| +||.||++ ++.||||+++..... ..+.+.+|+.++++++|||||++++++.+++..|+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4789999999999 99999974 688999999866432 24578889999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCc
Q 040702 582 VLEYMPLGSLEKCLYSGN-YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~ 660 (797)
||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999997652 35899999999999999999999 99999999999999999999999999999865432
Q ss_pred cCcc-----ccccccccCccccccccccc--CccchHHHHHHHhhhhhhhhccccccchhh-------------------
Q 040702 661 EDQS-----LTQTQTLATIGYMAPDEIFS--GEMRLKCWVNDSLLISVMIVVDANLLIREE------------------- 714 (797)
Q Consensus 661 ~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~------------------- 714 (797)
.... .......||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..++....
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 2111 11233479999999999987 578999999999998866655444432210
Q ss_pred -------------------------------------------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 715 -------------------------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 715 -------------------------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......+.++++.|++.||++|||+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 112234567899999999999999999875
No 119
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.5e-36 Score=318.45 Aligned_cols=239 Identities=21% Similarity=0.290 Sum_probs=199.7
Q ss_pred hcCCCccccccccCCcceeec----------ceEEEEEEEEeccC-CcchhHHHHHHHhhhc-cCCceeEeeeeeecCCe
Q 040702 511 TNRFSENNLIGRGGFGPVYKD----------GMEVAIKVFNLQYG-GAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDF 578 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~----------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~ 578 (797)
.++|...+.||+|+||.||++ +..||||+++.... ...+.+.+|+.+++++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 468999999999999999975 37899999975532 2346789999999999 89999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCCC-----------------CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE
Q 040702 579 KALVLEYMPLGSLEKCLYSGNY-----------------ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 641 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~~-----------------~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll 641 (797)
.++||||+++|+|.+++..... .+++..++.++.|+++||+||| +++|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 9999999999999999976542 3899999999999999999999 8999999999999999
Q ss_pred cCCCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-------
Q 040702 642 DDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE------- 713 (797)
Q Consensus 642 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~------- 713 (797)
+.++.+||+|||+++...............||+.|+|||.+.+..++.++|+|++|+..+..+. +..++...
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 258 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHH
Confidence 9999999999999987654433333345568889999999999999999999999998865553 33322211
Q ss_pred -----------hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 714 -----------EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 714 -----------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
+......+.++++.|++.||.+||++.|+++.|+.+...
T Consensus 259 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 259 KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 112234567899999999999999999999999887553
No 120
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.6e-36 Score=314.06 Aligned_cols=238 Identities=20% Similarity=0.245 Sum_probs=196.0
Q ss_pred HhcCCCccccccccCCcceeec----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
..++|+..+.||+|+||.||++ +..||||+++.... ..+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 3578999999999999999974 57899999975532 347799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCccc
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSL 665 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~ 665 (797)
+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~ 176 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YT 176 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HH
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc-cc
Confidence 9999999999875556899999999999999999999 9999999999999999999999999999998654322 12
Q ss_pred cccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcccccchhc
Q 040702 666 TQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQPMVRM 727 (797)
Q Consensus 666 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~l~~~ 727 (797)
......+|+.|+|||.+....++.++|+|++|+..+..+. +..++... +......+.++++.
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 256 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYS 256 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHH
Confidence 2334557889999999998999999999999999866553 33332211 11123356688999
Q ss_pred cccCCCCCCCChHHHHHhHHHHHHH
Q 040702 728 GTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 728 cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
|++.||++||++.++++.++.+.+.
T Consensus 257 ~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 257 CWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HccCChhHCcCHHHHHHHHHHHhhc
Confidence 9999999999999999999887643
No 121
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.7e-35 Score=312.54 Aligned_cols=227 Identities=21% Similarity=0.261 Sum_probs=184.9
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
++|+..+.||+|+||.||++ ++.||||+++..... ..+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57899999999999999985 688999999865432 24678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcc
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQS 664 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~ 664 (797)
|+++ ++.+.+......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-- 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--
Confidence 9976 666666655556999999999999999999999 8999999999999999999999999999998653222
Q ss_pred ccccccccCcccccccccccCc-cchHHHHHHHhhhhhhhhccccc-cch-hhh--------------------------
Q 040702 665 LTQTQTLATIGYMAPDEIFSGE-MRLKCWVNDSLLISVMIVVDANL-LIR-EEK-------------------------- 715 (797)
Q Consensus 665 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~s~~~~~~~~~~~~~~-~~~-~~~-------------------------- 715 (797)
.......||+.|+|||.+.+.. ++.++|+|++|+..+..+....+ +.. ...
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 2334567899999999998766 79999999999988655532221 111 100
Q ss_pred ------------------hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 ------------------HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 ------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.......++++.|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 11123457899999999999999887763
No 122
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.1e-36 Score=336.63 Aligned_cols=189 Identities=24% Similarity=0.343 Sum_probs=148.7
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecC-----Ce
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSND-----DF 578 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~-----~~ 578 (797)
.++|+..+.||+|+||.||++ ++.||||++...... ..+.+.+|++++++++||||+++++++... +.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999975 688999999754322 346788999999999999999999998443 57
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccC
Q 040702 579 KALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 658 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~ 658 (797)
.|+||||+. |+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEeccc-cchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 899999985 69999987654 4899999999999999999999 899999999999999999999999999999875
Q ss_pred CccCcc-------------------------ccccccccCcccccccccc-cCccchHHHHHHHhhhhhhhh
Q 040702 659 LEEDQS-------------------------LTQTQTLATIGYMAPDEIF-SGEMRLKCWVNDSLLISVMIV 704 (797)
Q Consensus 659 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~~~-~~~~~~~~dv~s~~~~~~~~~ 704 (797)
...... ......+||++|||||.+. ...++.++|+|++|++.++.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ell 278 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHH
Confidence 422110 1234567899999999874 566999999999999986555
No 123
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.3e-36 Score=319.94 Aligned_cols=241 Identities=20% Similarity=0.235 Sum_probs=190.5
Q ss_pred hcCCCccccccccCCcceeec-----ce----EEEEEEEEecc-CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GM----EVAIKVFNLQY-GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKA 580 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 580 (797)
.++|+..+.||+|+||.||++ ++ .||+|.+.... ....+.+.+|+.++++++||||+++++++..++ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 368999999999999999985 23 46777765442 334578999999999999999999999998765 78
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCc
Q 040702 581 LVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~ 660 (797)
+|+||+++|+|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999887667999999999999999999999 99999999999999999999999999999987654
Q ss_pred cCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchhh-----------------hhhhcccc
Q 040702 661 EDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIREE-----------------KHLMTKEQ 722 (797)
Q Consensus 661 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~~-----------------~~~~~~~~ 722 (797)
...........||+.|+|||.+.+..++.++|+|++|+..+..+. +..++.... ......+.
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 249 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVY 249 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHH
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHH
Confidence 433333445567889999999999999999999999999866554 333332211 11233567
Q ss_pred cchhccccCCCCCCCChHHHHHhHHHHHHHhcc
Q 040702 723 PMVRMGTDLSLGQFPASYSISKYLVYIRELERG 755 (797)
Q Consensus 723 ~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~ 755 (797)
++++.|++.||.+||++.|+++.++.+...+..
T Consensus 250 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 282 (327)
T 3lzb_A 250 MIMRKCWMIDADSRPKFRELIIEFSKMARDPQR 282 (327)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHHHHhCcCc
Confidence 889999999999999999999999998765443
No 124
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.8e-36 Score=324.10 Aligned_cols=240 Identities=20% Similarity=0.307 Sum_probs=187.6
Q ss_pred HHhcCCCccccccccCCcceeec-----ceEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEE
Q 040702 509 QATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 509 ~~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 581 (797)
...++|...+.||+|+||.||++ ++.||||+++.... ...+.+.+|++++++++||||+++++++.+++..|+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34578999999999999999985 68999999975532 224567899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEc-----CCCcEEEEeecCCc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-----DNMVAHLSDFGMAK 656 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~-----~~~~~kl~DFGla~ 656 (797)
||||+++ +|.+++..... +++..+..++.|++.||+||| +.+|+||||||+||+++ ..+.+||+|||+++
T Consensus 111 v~e~~~~-~L~~~~~~~~~-~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNPD-VSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEECCSE-EHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEecCCC-CHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 9999975 99999987654 899999999999999999999 89999999999999994 45569999999998
Q ss_pred cCCccCccccccccccCcccccccccccCc-cchHHHHHHHhhhhhhhhccccccchhhh-h------------------
Q 040702 657 PLLEEDQSLTQTQTLATIGYMAPDEIFSGE-MRLKCWVNDSLLISVMIVVDANLLIREEK-H------------------ 716 (797)
Q Consensus 657 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~s~~~~~~~~~~~~~~~~~~~~-~------------------ 716 (797)
...... .......||+.|+|||.+.+.. ++.++|+|++|+..+..+....++..... +
T Consensus 186 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 186 AFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred ccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence 653221 1234457899999999998754 89999999999988665554443322110 0
Q ss_pred ---------------------------hhcccccchhccccCCCCCCCChHHHHHhHHHHHHHhccccccccccCCcccc
Q 040702 717 ---------------------------LMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELERGKVGITSVAAFPIVH 769 (797)
Q Consensus 717 ---------------------------~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~~~~~~~~~~~~~~ 769 (797)
....+.++++.|++.||++|||+.|++ +
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l-------------------------~ 318 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNAL-------------------------E 318 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHH-------------------------T
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHh-------------------------C
Confidence 123445789999999999999987764 6
Q ss_pred cceeeeeeeee
Q 040702 770 HYLYRTVDYTI 780 (797)
Q Consensus 770 ~~~f~~~~~~~ 780 (797)
|+||++++|+.
T Consensus 319 hp~f~~~~~~P 329 (329)
T 3gbz_A 319 HPYFSHNDFDP 329 (329)
T ss_dssp SGGGSSSCSCC
T ss_pred CcccCCCCCCC
Confidence 89999999974
No 125
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=7.5e-36 Score=323.49 Aligned_cols=229 Identities=21% Similarity=0.308 Sum_probs=190.5
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc-----CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY-----GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKA 580 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 580 (797)
.++|+..+.||+|+||.||++ ++.||||+++... ....+.+.+|+.+++.++||||+++++++.+++..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 467999999999999999984 6899999997542 123567899999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCc---EEEEeecC
Q 040702 581 LVLEYMPLGSLEKCLYSG---NYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV---AHLSDFGM 654 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~---~kl~DFGl 654 (797)
+||||+++|+|.+.+... ...+++..+..++.||++||+||| +++|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999998877542 235899999999999999999999 999999999999999986654 99999999
Q ss_pred CccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh-------------------h
Q 040702 655 AKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE-------------------K 715 (797)
Q Consensus 655 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------------~ 715 (797)
++...... ......+||+.|+|||.+.+..++.++|+|++|++.+..+.+..++.... .
T Consensus 180 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~~~ 257 (351)
T 3c0i_A 180 AIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS 257 (351)
T ss_dssp CEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHHHT
T ss_pred eeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCccccc
Confidence 98764322 12345679999999999999999999999999998866555443332211 1
Q ss_pred hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 ~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.....+.++++.|+..||++||++.|+++
T Consensus 258 ~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 258 HISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 23345678999999999999999999876
No 126
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.5e-35 Score=314.47 Aligned_cols=236 Identities=18% Similarity=0.286 Sum_probs=193.7
Q ss_pred cCCCccccccccCCcceeec---------ceEEEEEEEEecc-CCcchhHHHHHHHhhhccCCceeEeeeeeecC--CeE
Q 040702 512 NRFSENNLIGRGGFGPVYKD---------GMEVAIKVFNLQY-GGAFKSFDIECGMMKRIRHRNLIKIISSCSND--DFK 579 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~---------~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~--~~~ 579 (797)
++|+..+.||+|+||.||++ ++.||||+++... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 56899999999999999863 5899999997553 23457889999999999999999999999876 568
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
++||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999766556899999999999999999999 9999999999999999999999999999998764
Q ss_pred ccCcc-ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccch--------------------------
Q 040702 660 EEDQS-LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIR-------------------------- 712 (797)
Q Consensus 660 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~-------------------------- 712 (797)
..... .......||..|+|||.+.+..++.++|+|++|+..+..+....+...
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 43321 223445688899999999999999999999999987555543221100
Q ss_pred ------hhhhhhcccccchhccccCCCCCCCChHHHHHhHHHHH
Q 040702 713 ------EEKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIR 750 (797)
Q Consensus 713 ------~~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~ 750 (797)
.+......+.++++.|++.||.+||++.++++.++.+.
T Consensus 258 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 01122345778999999999999999999999998763
No 127
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4.7e-36 Score=314.83 Aligned_cols=238 Identities=22% Similarity=0.263 Sum_probs=184.9
Q ss_pred hcCCCccccccccCCcceeec--------ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD--------GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~--------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 581 (797)
.++|+..+.||+|+||.||++ +..||||+++.... ...+.+.+|+.++++++||||+++++++. ++..|+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 468999999999999999975 24699998865432 23467889999999999999999999984 456899
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999999877666899999999999999999999 899999999999999999999999999999866432
Q ss_pred CccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhccccc
Q 040702 662 DQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQP 723 (797)
Q Consensus 662 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~ 723 (797)
.. .......+|+.|+|||.+....++.++|+|++|+..+..+. +..++... +......+.+
T Consensus 170 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 248 (281)
T 1mp8_A 170 TY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 248 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred cc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 21 12234457889999999998899999999999998865553 33222211 1122335678
Q ss_pred chhccccCCCCCCCChHHHHHhHHHHHHHh
Q 040702 724 MVRMGTDLSLGQFPASYSISKYLVYIRELE 753 (797)
Q Consensus 724 l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~ 753 (797)
+++.|++.||++||++.++++.++.+.+..
T Consensus 249 li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 249 LMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 899999999999999999999999886654
No 128
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.5e-35 Score=314.21 Aligned_cols=234 Identities=23% Similarity=0.285 Sum_probs=186.2
Q ss_pred hcCCCccccccccCCcceeec---ceEEEEEEEEeccCCcchhHHHHHHHhhh--ccCCceeEeeeeeec----CCeEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGGAFKSFDIECGMMKR--IRHRNLIKIISSCSN----DDFKAL 581 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~Hpniv~l~~~~~~----~~~~~l 581 (797)
.++|+..+.||+|+||.||++ ++.||||++... ..+.+..|.+++.. ++||||+++++++.. ....|+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 468999999999999999986 689999998644 23556677777766 789999999998654 346899
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHcc-----CCCCeEEcCCCCCceEEcCCCcEEEEeecCCc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFG-----YSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 656 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~-----~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~ 656 (797)
||||+++|+|.++++.. .+++..+..++.|++.||+|||.. ++++|+||||||+||+++.++.+||+|||+|+
T Consensus 84 v~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 161 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161 (301)
T ss_dssp EECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence 99999999999999654 489999999999999999999932 26799999999999999999999999999997
Q ss_pred cCCccCcc--ccccccccCcccccccccccC------ccchHHHHHHHhhhhhhhhcc----------ccccch------
Q 040702 657 PLLEEDQS--LTQTQTLATIGYMAPDEIFSG------EMRLKCWVNDSLLISVMIVVD----------ANLLIR------ 712 (797)
Q Consensus 657 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~dv~s~~~~~~~~~~~----------~~~~~~------ 712 (797)
........ .......||+.|+|||.+.+. .++.++|+|++|+..++.+.+ ..++..
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~ 241 (301)
T 3q4u_A 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241 (301)
T ss_dssp EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence 65332211 112345799999999998876 567899999999988655543 111110
Q ss_pred ----------------------hhhhhhcccccchhccccCCCCCCCChHHHHHhHHHH
Q 040702 713 ----------------------EEKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYI 749 (797)
Q Consensus 713 ----------------------~~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i 749 (797)
........+.++++.||+.||++||++.++++.|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred chhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 0011223467899999999999999999999998875
No 129
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.3e-35 Score=317.03 Aligned_cols=230 Identities=20% Similarity=0.268 Sum_probs=183.7
Q ss_pred hcCCCcc-ccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEEEEE
Q 040702 511 TNRFSEN-NLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 511 ~~~f~~~-~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
.+.|.+. +.||+|+||.||++ ++.||||+++.......+.+.+|++++.++ +||||+++++++.+++..|+||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3567774 78999999999984 689999999876655567899999999985 7999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCc---EEEEeecCCccCCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV---AHLSDFGMAKPLLE 660 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~---~kl~DFGla~~~~~ 660 (797)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++....
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 9999999999997654 4899999999999999999999 899999999999999998766 99999999986532
Q ss_pred cCc-----cccccccccCccccccccccc-----CccchHHHHHHHhhhhhhhhccccccchhh----------------
Q 040702 661 EDQ-----SLTQTQTLATIGYMAPDEIFS-----GEMRLKCWVNDSLLISVMIVVDANLLIREE---------------- 714 (797)
Q Consensus 661 ~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~---------------- 714 (797)
... ........||+.|+|||.+.. ..++.++|+|++|+..+..+.+..++....
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 211 111234569999999999875 568899999999999866555444332110
Q ss_pred -------------------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 715 -------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 715 -------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......+.++++.|++.||++||++.|+++
T Consensus 247 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 247 NMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 112335678999999999999999888764
No 130
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.4e-35 Score=319.47 Aligned_cols=241 Identities=23% Similarity=0.308 Sum_probs=199.7
Q ss_pred hcCCCccccccccCCcceeec------------ceEEEEEEEEeccC-CcchhHHHHHHHhhhc-cCCceeEeeeeeecC
Q 040702 511 TNRFSENNLIGRGGFGPVYKD------------GMEVAIKVFNLQYG-GAFKSFDIECGMMKRI-RHRNLIKIISSCSND 576 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~------------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 576 (797)
.++|...+.||+|+||.||++ +..||||+++.... ...+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 478999999999999999975 35799999875432 2346788999999999 899999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHhcCCC---------------CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE
Q 040702 577 DFKALVLEYMPLGSLEKCLYSGNY---------------ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 641 (797)
Q Consensus 577 ~~~~lv~e~~~~g~L~~~l~~~~~---------------~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll 641 (797)
+..|+||||+++|+|.+++..... .+++..++.++.|+++||+||| +.+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 999999999999999999976532 3889999999999999999999 8999999999999999
Q ss_pred cCCCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchhh------
Q 040702 642 DDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIREE------ 714 (797)
Q Consensus 642 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~~------ 714 (797)
+.++.+||+|||+++...............+|+.|+|||.+.+..++.++|+|++|+..+..+. +..++....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 270 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHH
Confidence 9999999999999987654333223344567889999999999999999999999999865554 333322111
Q ss_pred -----------hhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHHhc
Q 040702 715 -----------KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELER 754 (797)
Q Consensus 715 -----------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~ 754 (797)
......+.++++.|++.||.+||++.++++.|+.+.....
T Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 271 LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 1123356788999999999999999999999999877643
No 131
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7.1e-36 Score=320.21 Aligned_cols=240 Identities=20% Similarity=0.297 Sum_probs=183.1
Q ss_pred HhcCCCccccccccCCcceeecc--------eEEEEEEEEecc--CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKDG--------MEVAIKVFNLQY--GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFK 579 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~~--------~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 579 (797)
..++|...+.||+|+||.||++. ..||||+++... ....+.+.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 45689999999999999999852 279999987652 33457899999999999999999999999877655
Q ss_pred ------EEEEEccCCCCHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEE
Q 040702 580 ------ALVLEYMPLGSLEKCLYSGN-----YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAH 648 (797)
Q Consensus 580 ------~lv~e~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~k 648 (797)
++||||+++|+|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999986432 14899999999999999999999 89999999999999999999999
Q ss_pred EEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh--------------
Q 040702 649 LSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-------------- 713 (797)
Q Consensus 649 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-------------- 713 (797)
|+|||+++...............+|+.|+|||.+.+..++.++|+|++|+..+..+. +..++...
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~ 257 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNR 257 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCC
Confidence 999999987654433333344567889999999999999999999999999866555 33332221
Q ss_pred ---hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 714 ---EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 714 ---~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
+......+.++++.|++.||++||++.++.+.++.+...
T Consensus 258 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 258 LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 112334577899999999999999999999999887554
No 132
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.2e-34 Score=308.52 Aligned_cols=287 Identities=24% Similarity=0.296 Sum_probs=155.9
Q ss_pred CCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCC
Q 040702 22 SLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRL 101 (797)
Q Consensus 22 ~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l 101 (797)
+++++++++|. ++.+|..+. +++++|++++|+++++.|..|.++++|++|+|++|+++ .++...|..+
T Consensus 34 ~l~~l~~~~~~---------l~~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l 101 (332)
T 2ft3_A 34 HLRVVQCSDLG---------LKAVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS-KIHEKAFSPL 101 (332)
T ss_dssp ETTEEECCSSC---------CSSCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECGGGSTTC
T ss_pred cCCEEECCCCC---------ccccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccC-ccCHhHhhCc
Confidence 46666666665 233444442 45666666666666666666666666666666666666 4444445566
Q ss_pred CCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcC--CCCCccccccCCCCC
Q 040702 102 PNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTS--STPELSSLSSLSNCK 179 (797)
Q Consensus 102 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~--~~~~~~~~~~l~~l~ 179 (797)
++|++|+|++|+++ .+|..+. ++|++|++++|+|+.+.+..|.++++|++|++++|.++. ..+. .|..+
T Consensus 102 ~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-----~~~~l- 172 (332)
T 2ft3_A 102 RKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPG-----AFDGL- 172 (332)
T ss_dssp TTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTT-----SSCSC-
T ss_pred CCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcc-----cccCC-
Confidence 66666666666665 3333332 566666666666666666666666666666666666653 2221 24444
Q ss_pred CCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEE
Q 040702 180 YLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQL 259 (797)
Q Consensus 180 ~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 259 (797)
+|+.|++++|+++++.. .+. ++| ++|++++|.+++..+..|..+++|+.|
T Consensus 173 ~L~~L~l~~n~l~~l~~-~~~---------------------------~~L--~~L~l~~n~i~~~~~~~l~~l~~L~~L 222 (332)
T 2ft3_A 173 KLNYLRISEAKLTGIPK-DLP---------------------------ETL--NELHLDHNKIQAIELEDLLRYSKLYRL 222 (332)
T ss_dssp CCSCCBCCSSBCSSCCS-SSC---------------------------SSC--SCCBCCSSCCCCCCTTSSTTCTTCSCC
T ss_pred ccCEEECcCCCCCccCc-ccc---------------------------CCC--CEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 56666666666554221 111 122 555555555555555555555566666
Q ss_pred EccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCcccccc------ccccEEecc
Q 040702 260 DLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNL------NVLVQLDLS 333 (797)
Q Consensus 260 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l------~~L~~L~Ls 333 (797)
+|++|+++++.+..+..+++|+.|+|++|.++.+|..+..+++|+.|++++|.+++..+..|... ..|+.|+++
T Consensus 223 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~ 302 (332)
T 2ft3_A 223 GLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLF 302 (332)
T ss_dssp BCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECC
T ss_pred ECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEee
Confidence 66666665555555555566666666666665555555555555555555555554444444332 334444444
Q ss_pred Ccccc--cccCccccCCcccceecccCc
Q 040702 334 MNNFS--CVIPTKIGGLKDLQYLFLEYN 359 (797)
Q Consensus 334 ~N~l~--~~~~~~~~~l~~L~~L~Ls~N 359 (797)
+|.+. +..|..|..+++|+.|++++|
T Consensus 303 ~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 303 NNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp SSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred cCcccccccCcccccccchhhhhhcccc
Confidence 44443 333444444444444444444
No 133
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.8e-35 Score=322.49 Aligned_cols=238 Identities=16% Similarity=0.137 Sum_probs=191.8
Q ss_pred hcCCCccccccccCCcceeec----------ceEEEEEEEEeccCC-----------cchhHHHHHHHhhhccCCceeEe
Q 040702 511 TNRFSENNLIGRGGFGPVYKD----------GMEVAIKVFNLQYGG-----------AFKSFDIECGMMKRIRHRNLIKI 569 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~----------~~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~Hpniv~l 569 (797)
.++|...+.||+|+||.||++ ++.||||++...... ....+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 468999999999999999986 378999998754311 11234445666777789999999
Q ss_pred eeeeecC----CeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEc--C
Q 040702 570 ISSCSND----DFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD--D 643 (797)
Q Consensus 570 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~--~ 643 (797)
++++... ...|+||||+ +|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCC
Confidence 9998764 4589999999 99999999887667999999999999999999999 89999999999999999 8
Q ss_pred CCcEEEEeecCCccCCccCccc-----cccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh----
Q 040702 644 NMVAHLSDFGMAKPLLEEDQSL-----TQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE---- 714 (797)
Q Consensus 644 ~~~~kl~DFGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~---- 714 (797)
++.+||+|||+|+.+....... ......||+.|||||.+.+..++.++|+|++|+..++.+.+..++....
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 8999999999998764332211 1234569999999999999899999999999999866665554444210
Q ss_pred -----------------------hhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 715 -----------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 715 -----------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
......+.++++.|++.||.+||++.++.+.++.+.+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 270 YVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp HHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 11134567889999999999999999999999887654
No 134
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1e-35 Score=323.46 Aligned_cols=229 Identities=19% Similarity=0.331 Sum_probs=192.1
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
..++|...+.||+|+||.||++ +..||||++...... ..+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3578999999999999999974 689999999865322 345788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC---cEEEEeecCCccCC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM---VAHLSDFGMAKPLL 659 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~---~~kl~DFGla~~~~ 659 (797)
|||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||+++...
T Consensus 107 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp ECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 99999999999987654 4899999999999999999999 89999999999999998654 59999999998664
Q ss_pred ccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhc
Q 040702 660 EEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMT 719 (797)
Q Consensus 660 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~ 719 (797)
... ......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.... .....
T Consensus 183 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 259 (362)
T 2bdw_A 183 DSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTP 259 (362)
T ss_dssp TCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCH
T ss_pred CCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCH
Confidence 322 2345679999999999998899999999999999866655444332111 12234
Q ss_pred ccccchhccccCCCCCCCChHHHHHh
Q 040702 720 KEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 720 ~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
.+.++++.|+..||++||++.|+++.
T Consensus 260 ~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 260 EAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 56789999999999999999998764
No 135
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.3e-35 Score=330.43 Aligned_cols=233 Identities=25% Similarity=0.303 Sum_probs=193.8
Q ss_pred HhcCCCccccccccCCcceeec---ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCC-eEEEEEEc
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDD-FKALVLEY 585 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~-~~~lv~e~ 585 (797)
..++|+..+.||+|+||.||++ ++.||||+++... ..+.|.+|++++++++||||+++++++...+ ..|+||||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred ChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 3468889999999999999985 6899999997543 4578999999999999999999999987665 79999999
Q ss_pred cCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcc
Q 040702 586 MPLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQS 664 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~ 664 (797)
+++|+|.+++..... .+++..+..++.|+++||+||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 999999999986543 4789999999999999999999 999999999999999999999999999999854221
Q ss_pred ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcccccchh
Q 040702 665 LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQPMVR 726 (797)
Q Consensus 665 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~l~~ 726 (797)
.....+|..|+|||.+.++.++.++|+|++|+..++.+. +..++... +......+.++++
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~ 420 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMK 420 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence 122367889999999999999999999999998865553 33222211 1122346678899
Q ss_pred ccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 727 MGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 727 ~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
.||+.||++||++.++.+.|+.+...
T Consensus 421 ~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 421 NCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 99999999999999999999887653
No 136
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=313.37 Aligned_cols=227 Identities=22% Similarity=0.290 Sum_probs=182.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC--------------------------CcchhHHHHHHHhh
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG--------------------------GAFKSFDIECGMMK 559 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~--------------------------~~~~~~~~E~~~l~ 559 (797)
.++|...+.||+|+||.||++ ++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 468999999999999999985 68999999975431 12367889999999
Q ss_pred hccCCceeEeeeeeec--CCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCC
Q 040702 560 RIRHRNLIKIISSCSN--DDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPS 637 (797)
Q Consensus 560 ~l~Hpniv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~ 637 (797)
+++||||+++++++.+ .+..|+||||+++|+|.++.... .+++..+..++.|+++||+||| +.+|+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999986 56899999999999998765433 5899999999999999999999 899999999999
Q ss_pred ceEEcCCCcEEEEeecCCccCCccCccccccccccCcccccccccccCc---cchHHHHHHHhhhhhhhhccccccchhh
Q 040702 638 NVLLDDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGE---MRLKCWVNDSLLISVMIVVDANLLIREE 714 (797)
Q Consensus 638 NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~dv~s~~~~~~~~~~~~~~~~~~~ 714 (797)
||+++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|+|++|+..+..+.+..++....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 99999999999999999986643321 234567999999999987655 4789999999998866555443332110
Q ss_pred ------------------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 715 ------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 715 ------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......+.++++.|++.||++||++.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 IMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 122345678999999999999999988764
No 137
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=323.73 Aligned_cols=224 Identities=20% Similarity=0.308 Sum_probs=184.5
Q ss_pred CccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEccCCC
Q 040702 515 SENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEYMPLG 589 (797)
Q Consensus 515 ~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~~~~g 589 (797)
...+.||+|+||.||++ +..||||+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 33578999999999984 6899999998765445678999999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE--cCCCcEEEEeecCCccCCccCccccc
Q 040702 590 SLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL--DDNMVAHLSDFGMAKPLLEEDQSLTQ 667 (797)
Q Consensus 590 ~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll--~~~~~~kl~DFGla~~~~~~~~~~~~ 667 (797)
+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++...... ..
T Consensus 172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~~ 245 (373)
T 2x4f_A 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KL 245 (373)
T ss_dssp EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---BC
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---cc
Confidence 999998776556899999999999999999999 8999999999999999 567899999999998764332 22
Q ss_pred cccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhcccccchhc
Q 040702 668 TQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMTKEQPMVRM 727 (797)
Q Consensus 668 ~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~l~~~ 727 (797)
....||+.|+|||.+..+.++.++|+|++|+..++.+.+..++.... ......+.++++.
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 325 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISK 325 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHT
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHH
Confidence 34579999999999998899999999999998866555444332111 1223456788999
Q ss_pred cccCCCCCCCChHHHHH
Q 040702 728 GTDLSLGQFPASYSISK 744 (797)
Q Consensus 728 cl~~dp~~RPs~~~i~~ 744 (797)
|+..||.+||++.|+++
T Consensus 326 ~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 326 LLIKEKSWRISASEALK 342 (373)
T ss_dssp TSCSSGGGSCCHHHHHH
T ss_pred HcCCChhhCCCHHHHhc
Confidence 99999999999999987
No 138
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=4.3e-34 Score=307.52 Aligned_cols=289 Identities=23% Similarity=0.257 Sum_probs=188.5
Q ss_pred CCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeee
Q 040702 77 STLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLG 156 (797)
Q Consensus 77 ~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~ 156 (797)
.+++.+++++|.++ .+|...+ ++|++|+|++|++++..|..|.++++|++|+|++|+|+++.|.+|.++++|++|+
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred ccCCEEECCCCCcc-ccCCCCC---CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 36888888888887 7887664 6888999999998887788889999999999999999988888999999999999
Q ss_pred ccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccc--cCChhhhhhhhhHhhh
Q 040702 157 LNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISG--SIPEEINNLTNLILQL 234 (797)
Q Consensus 157 L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~--~~p~~~~~l~~L~L~~ 234 (797)
|++|.++.++..+ + ++|++|++++|++.++.+..|.+++ +|+.|++++|.++. ..+..+..+ +| ++
T Consensus 109 L~~n~l~~l~~~~-----~---~~L~~L~l~~n~i~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~l-~L--~~ 176 (332)
T 2ft3_A 109 ISKNHLVEIPPNL-----P---SSLVELRIHDNRIRKVPKGVFSGLR-NMNCIEMGGNPLENSGFEPGAFDGL-KL--NY 176 (332)
T ss_dssp CCSSCCCSCCSSC-----C---TTCCEEECCSSCCCCCCSGGGSSCS-SCCEEECCSCCCBGGGSCTTSSCSC-CC--SC
T ss_pred CCCCcCCccCccc-----c---ccCCEEECCCCccCccCHhHhCCCc-cCCEEECCCCccccCCCCcccccCC-cc--CE
Confidence 9999998887653 2 6789999999999888777888887 78888888887752 445555444 33 56
Q ss_pred cccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCC
Q 040702 235 LSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFT 314 (797)
Q Consensus 235 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~ 314 (797)
|++++|+++++ |..+. ++|++|++++|++++..+..|..+++|+.|+|++|.++.+
T Consensus 177 L~l~~n~l~~l-~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~--------------------- 232 (332)
T 2ft3_A 177 LRISEAKLTGI-PKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI--------------------- 232 (332)
T ss_dssp CBCCSSBCSSC-CSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCC---------------------
T ss_pred EECcCCCCCcc-Ccccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcC---------------------
Confidence 66666666542 22222 3555555555555555545555555555555555555444
Q ss_pred CCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhc------cccCCeeeecCCcCC--
Q 040702 315 GPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGD------LISLKSLNLSNNNLS-- 386 (797)
Q Consensus 315 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~-- 386 (797)
.+..|..+++|++|++++|+++ .+|..+..+++|+.|++++|++++..+..|.. ...|+.|++++|.+.
T Consensus 233 --~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~ 309 (332)
T 2ft3_A 233 --ENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYW 309 (332)
T ss_dssp --CTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGG
T ss_pred --ChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccc
Confidence 3344444444444444444444 33344444445555555555554443333332 245666666666665
Q ss_pred CCCChhhhccCCCCeEEccCCc
Q 040702 387 GTIPISLEKLLDLKDINVSFNR 408 (797)
Q Consensus 387 ~~~p~~~~~l~~L~~L~l~~N~ 408 (797)
+..|..|..+++|+.+++++|+
T Consensus 310 ~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 310 EVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GSCGGGGTTBCCSTTEEC----
T ss_pred ccCcccccccchhhhhhccccc
Confidence 4556666666667777666663
No 139
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=315.06 Aligned_cols=232 Identities=20% Similarity=0.230 Sum_probs=191.7
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc-CCcchhHHHHHHHhhhccCCceeEeeeeeecCC--eEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY-GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDD--FKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~--~~~lv 582 (797)
.++|...+.||+|+||.||++ ++.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 367999999999999999985 6889999997553 234567889999999999999999999988765 78999
Q ss_pred EEccCCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE----cCCCcEEEEeecCCc
Q 040702 583 LEYMPLGSLEKCLYSGNY--ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL----DDNMVAHLSDFGMAK 656 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll----~~~~~~kl~DFGla~ 656 (797)
|||+++|+|.+++..... .+++..++.++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999976443 3899999999999999999999 9999999999999999 788889999999998
Q ss_pred cCCccCccccccccccCcccccccccc--------cCccchHHHHHHHhhhhhhhhccccccchh---------------
Q 040702 657 PLLEEDQSLTQTQTLATIGYMAPDEIF--------SGEMRLKCWVNDSLLISVMIVVDANLLIRE--------------- 713 (797)
Q Consensus 657 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~--------------- 713 (797)
...... ......||+.|+|||.+. +..++.++|+|++|+..++.+.+..++...
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp ECCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ecCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 764332 223467999999999876 577899999999999986666554443210
Q ss_pred ------------------------------hhhhhcccccchhccccCCCCCCCChHHHHHhHHH
Q 040702 714 ------------------------------EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVY 748 (797)
Q Consensus 714 ------------------------------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~ 748 (797)
.......+.++++.|++.||++||++.|+++...+
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 01122355678899999999999999999987654
No 140
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7.7e-36 Score=314.58 Aligned_cols=236 Identities=22% Similarity=0.298 Sum_probs=182.6
Q ss_pred hcCCCccccccccCCcceeec--ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEcc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD--GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEYM 586 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~--~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~~ 586 (797)
.++|...+.||+|+||.||++ ...||||+++..... ..+.+.+|+.++++++||||+++++++ ..+..++||||+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~ 101 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWC 101 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred ccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEec
Confidence 468999999999999999986 467999999765432 346789999999999999999999965 445689999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcccc
Q 040702 587 PLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLT 666 (797)
Q Consensus 587 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 666 (797)
++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 102 EGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp CEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 999999999776667999999999999999999999 89999999999999999999999999999986543222223
Q ss_pred ccccccCcccccccccc---cCccchHHHHHHHhhhhhhhhccccccchhh----------------------hhhhccc
Q 040702 667 QTQTLATIGYMAPDEIF---SGEMRLKCWVNDSLLISVMIVVDANLLIREE----------------------KHLMTKE 721 (797)
Q Consensus 667 ~~~~~gt~~y~aPE~~~---~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~ 721 (797)
.....||+.|+|||.+. ...++.++|+|++|+..+..+.+..++.... ......+
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 258 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHH
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHH
Confidence 34567999999999886 5678899999999998866555444332210 1122356
Q ss_pred ccchhccccCCCCCCCChHHHHHhHHHHH
Q 040702 722 QPMVRMGTDLSLGQFPASYSISKYLVYIR 750 (797)
Q Consensus 722 ~~l~~~cl~~dp~~RPs~~~i~~~l~~i~ 750 (797)
.++++.|++.||.+||++.++++.|+.+.
T Consensus 259 ~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 259 KRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 78899999999999999999999887753
No 141
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.3e-36 Score=322.61 Aligned_cols=245 Identities=19% Similarity=0.252 Sum_probs=198.8
Q ss_pred cCHHHHHHHhcCCCccccccccCCcceeec----------ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEee
Q 040702 502 FTYLELFQATNRFSENNLIGRGGFGPVYKD----------GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKII 570 (797)
Q Consensus 502 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vyk~----------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~ 570 (797)
+...++....++|...+.||+|+||.||++ +..||||++..... .....+.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 333444556789999999999999999975 46799999875432 2235688999999999999999999
Q ss_pred eeeecCCeEEEEEEccCCCCHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE
Q 040702 571 SSCSNDDFKALVLEYMPLGSLEKCLYSGN---------YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 641 (797)
Q Consensus 571 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll 641 (797)
+++.+.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEE
Confidence 99999999999999999999999986522 24688999999999999999999 8999999999999999
Q ss_pred cCCCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-------
Q 040702 642 DDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE------- 713 (797)
Q Consensus 642 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~------- 713 (797)
+.++.+||+|||+++...............||+.|+|||.+.++.++.++|+|++|+..+..+. ...++...
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 251 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 251 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHH
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHH
Confidence 9999999999999986544333233344567899999999999999999999999998865554 33322211
Q ss_pred ----------hhhhhcccccchhccccCCCCCCCChHHHHHhHHHH
Q 040702 714 ----------EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYI 749 (797)
Q Consensus 714 ----------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i 749 (797)
+......+.++++.|++.||.+||++.|+++.++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 252 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 112233567889999999999999999999887654
No 142
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.5e-34 Score=305.87 Aligned_cols=290 Identities=21% Similarity=0.237 Sum_probs=197.9
Q ss_pred CCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccC
Q 040702 21 SSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVR 100 (797)
Q Consensus 21 ~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~ 100 (797)
.++++++++++.+ +.+|..+. +++++|++++|+++++.+..|.++++|++|+|++|+++ .++...|..
T Consensus 31 c~l~~l~~~~~~l---------~~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~ 98 (330)
T 1xku_A 31 CHLRVVQCSDLGL---------EKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS-KISPGAFAP 98 (330)
T ss_dssp EETTEEECTTSCC---------CSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCC-CBCTTTTTT
T ss_pred CCCeEEEecCCCc---------cccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCC-eeCHHHhcC
Confidence 3677788887773 34454443 46778888888887777777778888888888888887 454445567
Q ss_pred CCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcC--CCCCccccccCCCC
Q 040702 101 LPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTS--STPELSSLSSLSNC 178 (797)
Q Consensus 101 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~--~~~~~~~~~~l~~l 178 (797)
+++|++|+|++|+++ .+|..+. ++|++|++++|+|+++.+..|.++++|++|+|++|.++. ..+. .|.++
T Consensus 99 l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-----~~~~l 170 (330)
T 1xku_A 99 LVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENG-----AFQGM 170 (330)
T ss_dssp CTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTT-----GGGGC
T ss_pred CCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChh-----hccCC
Confidence 788888888888777 3444443 678888888888877777777778888888888877764 2222 35667
Q ss_pred CCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcE
Q 040702 179 KYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQ 258 (797)
Q Consensus 179 ~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 258 (797)
++|++|++++|+++.+... +. .+| ++|++++|++++..+..|..+++|++
T Consensus 171 ~~L~~L~l~~n~l~~l~~~-~~---~~L--------------------------~~L~l~~n~l~~~~~~~~~~l~~L~~ 220 (330)
T 1xku_A 171 KKLSYIRIADTNITTIPQG-LP---PSL--------------------------TELHLDGNKITKVDAASLKGLNNLAK 220 (330)
T ss_dssp TTCCEEECCSSCCCSCCSS-CC---TTC--------------------------SEEECTTSCCCEECTGGGTTCTTCCE
T ss_pred CCcCEEECCCCccccCCcc-cc---ccC--------------------------CEEECCCCcCCccCHHHhcCCCCCCE
Confidence 7777777777777643221 11 133 55666666666666677777778888
Q ss_pred EEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCcccccc------ccccEEec
Q 040702 259 LDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNL------NVLVQLDL 332 (797)
Q Consensus 259 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l------~~L~~L~L 332 (797)
|+|++|++++..+..+..+++|+.|+|++|.++.+|..+..+++|+.|++++|++++..+..|... ..++.|++
T Consensus 221 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l 300 (330)
T 1xku_A 221 LGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSL 300 (330)
T ss_dssp EECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEEC
T ss_pred EECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEe
Confidence 888888887777777777888888888888888888777777888888888888876666665432 45666666
Q ss_pred cCccccc--ccCccccCCcccceecccCcc
Q 040702 333 SMNNFSC--VIPTKIGGLKDLQYLFLEYNR 360 (797)
Q Consensus 333 s~N~l~~--~~~~~~~~l~~L~~L~Ls~N~ 360 (797)
++|.+.. +.|..|..+.+++.++|++|+
T Consensus 301 ~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 301 FSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ecCcccccccCccccccccceeEEEecccC
Confidence 6666643 345556666666666666653
No 143
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.3e-35 Score=316.13 Aligned_cols=229 Identities=22% Similarity=0.260 Sum_probs=193.2
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccC--------CcchhHHHHHHHhhhccCCceeEeeeeeecC
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG--------GAFKSFDIECGMMKRIRHRNLIKIISSCSND 576 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~ 576 (797)
..++|...+.||+|+||.||++ ++.||||+++.... ...+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4578999999999999999985 68999999986532 1335678899999999999999999999999
Q ss_pred CeEEEEEEccCCC-CHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCC
Q 040702 577 DFKALVLEYMPLG-SLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMA 655 (797)
Q Consensus 577 ~~~~lv~e~~~~g-~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla 655 (797)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 9999998765 4899999999999999999999 899999999999999999999999999999
Q ss_pred ccCCccCccccccccccCcccccccccccCcc-chHHHHHHHhhhhhhhhccccccchhhh----------hhhcccccc
Q 040702 656 KPLLEEDQSLTQTQTLATIGYMAPDEIFSGEM-RLKCWVNDSLLISVMIVVDANLLIREEK----------HLMTKEQPM 724 (797)
Q Consensus 656 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~dv~s~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l 724 (797)
+...... ......||+.|+|||.+.+..+ +.++|+|++|+..+..+.+..++..... .....+.++
T Consensus 178 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~l~~l 254 (335)
T 3dls_A 178 AYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSL 254 (335)
T ss_dssp EECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCCCSSCCCHHHHHH
T ss_pred eECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhccCCCcccCHHHHHH
Confidence 8664332 2334679999999999988877 8999999999998666655544433221 123356789
Q ss_pred hhccccCCCCCCCChHHHHHh
Q 040702 725 VRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 725 ~~~cl~~dp~~RPs~~~i~~~ 745 (797)
++.|++.||++||++.++++.
T Consensus 255 i~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 255 VSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp HHHHTCSSGGGSCCHHHHHHC
T ss_pred HHHHccCChhhCcCHHHHhcC
Confidence 999999999999999998864
No 144
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.6e-35 Score=308.29 Aligned_cols=228 Identities=25% Similarity=0.342 Sum_probs=189.8
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCc-------chhHHHHHHHhhhccCCceeEeeeeeecCCe
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGA-------FKSFDIECGMMKRIRHRNLIKIISSCSNDDF 578 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~-------~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 578 (797)
.++|+..+.||+|+||.||++ ++.||||++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 368999999999999999974 6889999987653322 267889999999999999999999997665
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCceEEcCCCc-----EEEEe
Q 040702 579 KALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVP--IIHCDLKPSNVLLDDNMV-----AHLSD 651 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~--ivHrDlkp~NIll~~~~~-----~kl~D 651 (797)
++||||+++|+|.+++......+++..+..++.|++.||+||| +.+ |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 7999999999999999877667999999999999999999999 888 999999999999988776 99999
Q ss_pred ecCCccCCccCccccccccccCccccccccc--ccCccchHHHHHHHhhhhhhhhccccccchh----------------
Q 040702 652 FGMAKPLLEEDQSLTQTQTLATIGYMAPDEI--FSGEMRLKCWVNDSLLISVMIVVDANLLIRE---------------- 713 (797)
Q Consensus 652 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~---------------- 713 (797)
||+++.... ......||+.|+|||.+ ....++.++|+|++|+..+..+.+..++...
T Consensus 173 fg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 247 (287)
T 4f0f_A 173 FGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL 247 (287)
T ss_dssp CTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC
T ss_pred CCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC
Confidence 999985422 23446799999999998 4556789999999999886665544443221
Q ss_pred ----hhhhhcccccchhccccCCCCCCCChHHHHHhHHH
Q 040702 714 ----EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVY 748 (797)
Q Consensus 714 ----~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~ 748 (797)
+......+.++++.|++.||++||++.++++.|++
T Consensus 248 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 248 RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 11223356789999999999999999999998864
No 145
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=9.6e-36 Score=318.05 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=204.3
Q ss_pred ccCHHHHHHHhcCCCccccccccCCcceeec----------ceEEEEEEEEeccCC-cchhHHHHHHHhhhc-cCCceeE
Q 040702 501 RFTYLELFQATNRFSENNLIGRGGFGPVYKD----------GMEVAIKVFNLQYGG-AFKSFDIECGMMKRI-RHRNLIK 568 (797)
Q Consensus 501 ~~~~~~l~~~~~~f~~~~~lg~G~~g~Vyk~----------~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l-~Hpniv~ 568 (797)
.+...+.....++|...+.||+|+||.||++ ++.||||+++..... ..+.+.+|+.+++++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 4555555566789999999999999999985 378999999755322 345788999999999 6999999
Q ss_pred eeeeeecCC-eEEEEEEccCCCCHHHHHhcCCC---------------CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEc
Q 040702 569 IISSCSNDD-FKALVLEYMPLGSLEKCLYSGNY---------------ILDIFQGLNIMIDVASALEYLHFGYSVPIIHC 632 (797)
Q Consensus 569 l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~---------------~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHr 632 (797)
+++++...+ ..++||||+++|+|.+++..... .+++..+..++.|+++||.||| +.+|+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 999987755 58999999999999999987543 2789999999999999999999 8999999
Q ss_pred CCCCCceEEcCCCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccc
Q 040702 633 DLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLI 711 (797)
Q Consensus 633 Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~ 711 (797)
||||+||+++.++.+||+|||+++...............||+.|+|||.+.+..++.++|+|++|+..+..+. +..++.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999987654433333445678999999999999999999999999999865553 333322
Q ss_pred hh------------------hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 712 RE------------------EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 712 ~~------------------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
.. +......+.+++..|++.||.+||++.++++.++.+.+-
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp TCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 11 111233567889999999999999999999999988654
No 146
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.5e-35 Score=318.32 Aligned_cols=239 Identities=19% Similarity=0.229 Sum_probs=196.8
Q ss_pred hcCCCccccccccCCcceeec---------ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeee--cCCeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD---------GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCS--NDDFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~---------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~--~~~~~ 579 (797)
.++|+..+.||+|+||.||++ +..||||++........+.+.+|++++++++||||+++++++. +.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 368999999999999999864 4789999997665444567999999999999999999999886 45578
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
++||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 9999999999999999875556899999999999999999999 8999999999999999999999999999998764
Q ss_pred ccCcc-ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh------------------------
Q 040702 660 EEDQS-LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE------------------------ 714 (797)
Q Consensus 660 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~------------------------ 714 (797)
..... .......||+.|+|||.+.+..++.++|+|++|+..+..+....++....
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 33221 12334568899999999999999999999999998865554333221111
Q ss_pred --------hhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 715 --------KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 715 --------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
......+.++++.|++.||++||++.|+++.|+.+...
T Consensus 259 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 259 EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 11234577899999999999999999999999887544
No 147
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.2e-35 Score=312.87 Aligned_cols=227 Identities=22% Similarity=0.288 Sum_probs=183.3
Q ss_pred cCCCccccccccCCcceeec----ceEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 512 NRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
++|...+.||+|+||.||++ ++.||||+++.... ...+.+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57899999999999999985 68899999975532 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCccc
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSL 665 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~ 665 (797)
+++ +|.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--R 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--c
Confidence 975 999999876566899999999999999999999 8999999999999999999999999999997653221 1
Q ss_pred cccccccCcccccccccccC-ccchHHHHHHHhhhhhhhhccccccchhhh-----------------------------
Q 040702 666 TQTQTLATIGYMAPDEIFSG-EMRLKCWVNDSLLISVMIVVDANLLIREEK----------------------------- 715 (797)
Q Consensus 666 ~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~----------------------------- 715 (797)
......||+.|+|||.+.+. .++.++|+|++|+..+..+.+..++.....
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccc
Confidence 23445789999999998764 589999999999988665554443322110
Q ss_pred ----------------hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 ----------------HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 ----------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.......++++.|++.||++||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 01122347899999999999999887753
No 148
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=314.39 Aligned_cols=227 Identities=21% Similarity=0.230 Sum_probs=181.5
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
++|+..+.||+|+||.||++ ++.||||++...... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57999999999999999974 688999998655332 24567899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcc
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQS 664 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~ 664 (797)
|++++++.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp CCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 999999998887654 4899999999999999999999 99999999999999999999999999999986543222
Q ss_pred ccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhhh----------------------------
Q 040702 665 LTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREEK---------------------------- 715 (797)
Q Consensus 665 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~---------------------------- 715 (797)
......||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..++.....
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 158 -YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred -ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 2344579999999999876 5679999999999987665554433221110
Q ss_pred -------------------hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 -------------------HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 -------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.....+.++++.|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 11123557899999999999999988874
No 149
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.3e-35 Score=309.61 Aligned_cols=229 Identities=22% Similarity=0.306 Sum_probs=181.7
Q ss_pred hcCCCccccccccCCcceeec---ceEEEEEEEEeccC----CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYG----GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~----~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
.++|+..+.||+|+||.||++ +..||||+++.... ...+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 368899999999999999986 68999999875532 22467889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC---eEEcCCCCCceEEcC--------CCcEEEEee
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVP---IIHCDLKPSNVLLDD--------NMVAHLSDF 652 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~---ivHrDlkp~NIll~~--------~~~~kl~DF 652 (797)
||+++++|.+++... .+++..+..++.|+++||+||| +.+ |+||||||+||+++. ++.+||+||
T Consensus 86 e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp ECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999998654 4899999999999999999999 777 999999999999985 678999999
Q ss_pred cCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh------------------
Q 040702 653 GMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE------------------ 714 (797)
Q Consensus 653 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~------------------ 714 (797)
|+++...... .....||+.|+|||.+.+..++.++|+|++|+..+..+....++....
T Consensus 161 g~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (271)
T 3dtc_A 161 GLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP 236 (271)
T ss_dssp CC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCC
T ss_pred Cccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCC
Confidence 9998653322 234579999999999999999999999999998866555444332211
Q ss_pred hhhhcccccchhccccCCCCCCCChHHHHHhHHH
Q 040702 715 KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVY 748 (797)
Q Consensus 715 ~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~ 748 (797)
......+.++++.|++.||.+||++.|+++.|+.
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 1223456789999999999999999999998864
No 150
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.1e-35 Score=319.67 Aligned_cols=228 Identities=21% Similarity=0.217 Sum_probs=182.3
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
.++|...+.||+|+||.||++ ++.||||++..... ..+.+.+|+.+++.++||||+++++++.+++..|+||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 468999999999999999974 68899999975432 346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCc--EEEEeecCCccCCccCc
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV--AHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~--~kl~DFGla~~~~~~~~ 663 (797)
+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+|+......
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~- 172 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 172 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence 99999999987654 4899999999999999999999 999999999999999987765 9999999998432221
Q ss_pred cccccccccCcccccccccccCccchH-HHHHHHhhhhhhhhccccccchhhh----------------------hhhcc
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEMRLK-CWVNDSLLISVMIVVDANLLIREEK----------------------HLMTK 720 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~~~~-~dv~s~~~~~~~~~~~~~~~~~~~~----------------------~~~~~ 720 (797)
......||+.|+|||.+.+..+..+ +|+|++|+..+..+.+..++..... .....
T Consensus 173 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 250 (361)
T 3uc3_A 173 --QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPE 250 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHH
T ss_pred --CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHH
Confidence 2344679999999999988887655 8999999998666655544432111 12335
Q ss_pred cccchhccccCCCCCCCChHHHHHhH
Q 040702 721 EQPMVRMGTDLSLGQFPASYSISKYL 746 (797)
Q Consensus 721 ~~~l~~~cl~~dp~~RPs~~~i~~~l 746 (797)
+.++++.|+..||++|||+.|+++.-
T Consensus 251 ~~~li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 251 CCHLISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred HHHHHHHHccCChhHCcCHHHHHhCc
Confidence 56899999999999999999998753
No 151
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.5e-36 Score=321.74 Aligned_cols=227 Identities=20% Similarity=0.284 Sum_probs=180.5
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
++|...+.||+|+||.||++ ++.||||+++.... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57899999999999999985 58899999975532 2234566799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCccc
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSL 665 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~ 665 (797)
++ |+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--K 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--c
Confidence 97 5999999877667899999999999999999999 9999999999999999999999999999998553222 1
Q ss_pred cccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhhh-----------------------------
Q 040702 666 TQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREEK----------------------------- 715 (797)
Q Consensus 666 ~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~----------------------------- 715 (797)
......||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..++.....
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhc
Confidence 2344578999999999876 5689999999999998666555443322110
Q ss_pred -----------------hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 -----------------HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 -----------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.......++++.|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 11223468999999999999999988875
No 152
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=313.31 Aligned_cols=225 Identities=20% Similarity=0.189 Sum_probs=182.3
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEeccCCc--chhHHHHHHHhhhc-cCCceeEeeeeeecCCeEEEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGA--FKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~--~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
++|+..++||+|+||.||++ ++.||||++....... ...+..|+..+.++ +||||++++++|.+++..|+||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 68999999999999999984 6899999986543322 23455666666655 8999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
||+ +|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 67999988776667999999999999999999999 8999999999999999999999999999998654322
Q ss_pred cccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccc-cch--------------hhhhhhcccccchhcc
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANL-LIR--------------EEKHLMTKEQPMVRMG 728 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~-~~~--------------~~~~~~~~~~~l~~~c 728 (797)
......||+.|+|||.+.+ .++.++|+|++|+..++.+.+..+ ... ........+.++++.|
T Consensus 212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 288 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMM 288 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHHHH
T ss_pred --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHHHH
Confidence 2344569999999998764 789999999999987665544222 111 1222345677899999
Q ss_pred ccCCCCCCCChHHHHH
Q 040702 729 TDLSLGQFPASYSISK 744 (797)
Q Consensus 729 l~~dp~~RPs~~~i~~ 744 (797)
++.||++||++.|+++
T Consensus 289 L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 289 LEPDPKLRATAEALLA 304 (311)
T ss_dssp SCSSTTTSCCHHHHHT
T ss_pred cCCChhhCcCHHHHHh
Confidence 9999999999998874
No 153
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.7e-35 Score=329.92 Aligned_cols=189 Identities=26% Similarity=0.360 Sum_probs=158.0
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecC-----Ce
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSND-----DF 578 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~-----~~ 578 (797)
.++|...+.||+|+||.||++ ++.||||++...... ..+.+.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999985 689999999754322 346788999999999999999999999766 57
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccC
Q 040702 579 KALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 658 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~ 658 (797)
.|+||||++ |+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999996 59999997754 4899999999999999999999 999999999999999999999999999999876
Q ss_pred CccCcc--------------------ccccccccCccccccccc-ccCccchHHHHHHHhhhhhhhh
Q 040702 659 LEEDQS--------------------LTQTQTLATIGYMAPDEI-FSGEMRLKCWVNDSLLISVMIV 704 (797)
Q Consensus 659 ~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~dv~s~~~~~~~~~ 704 (797)
...... ......+||++|+|||.+ ....++.++|+|++|++.++.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell 246 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHH
Confidence 432211 123567899999999986 4566999999999999985555
No 154
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.2e-36 Score=322.13 Aligned_cols=241 Identities=21% Similarity=0.304 Sum_probs=198.2
Q ss_pred HhcCCCccccccccCCcceeecc----------eEEEEEEEEeccC-CcchhHHHHHHHhhhc-cCCceeEeeeeeecCC
Q 040702 510 ATNRFSENNLIGRGGFGPVYKDG----------MEVAIKVFNLQYG-GAFKSFDIECGMMKRI-RHRNLIKIISSCSNDD 577 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~~----------~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 577 (797)
..++|...+.||+|+||.||++. ..||||.++.... ...+.+.+|+.+++++ +||||+++++++..++
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 45789999999999999999852 4799999975532 2346788999999999 8999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHhcC-------------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCC
Q 040702 578 FKALVLEYMPLGSLEKCLYSG-------------NYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN 644 (797)
Q Consensus 578 ~~~lv~e~~~~g~L~~~l~~~-------------~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~ 644 (797)
..++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCC
Confidence 999999999999999998653 124789999999999999999999 8999999999999999999
Q ss_pred CcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh----------
Q 040702 645 MVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE---------- 713 (797)
Q Consensus 645 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~---------- 713 (797)
+.+||+|||+++...............||+.|+|||.+.+..++.++|+|++|+..+..+. +..++...
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 280 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 280 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHH
Confidence 9999999999986644433333344567889999999999999999999999999865553 33222210
Q ss_pred --------hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHHh
Q 040702 714 --------EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELE 753 (797)
Q Consensus 714 --------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~ 753 (797)
+......+.++++.|++.||.+||++.++++.|+.+....
T Consensus 281 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 281 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 1112335678999999999999999999999998876543
No 155
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2e-35 Score=334.74 Aligned_cols=235 Identities=20% Similarity=0.310 Sum_probs=196.2
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
...+|...+.||+|+||.||++ +..||||+++... ...++|.+|+.++++++||||++++++|...+..|+|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 3467889999999999999985 5889999987543 235789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 585 YMPLGSLEKCLYSGN-YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
|+++|+|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 372 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT- 372 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-
Confidence 999999999998643 35899999999999999999999 8999999999999999999999999999998654322
Q ss_pred cccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcccccch
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQPMV 725 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~l~ 725 (797)
........+|..|+|||.+..+.++.++|||++|+..++.+. +..++... +......+.+++
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 452 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 452 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 222334557889999999999999999999999999865554 32222211 112234567889
Q ss_pred hccccCCCCCCCChHHHHHhHHHH
Q 040702 726 RMGTDLSLGQFPASYSISKYLVYI 749 (797)
Q Consensus 726 ~~cl~~dp~~RPs~~~i~~~l~~i 749 (797)
+.||+.||++||++.++++.|+.+
T Consensus 453 ~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 453 RACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHcCcChhHCcCHHHHHHHHHHH
Confidence 999999999999999999888764
No 156
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=5.3e-35 Score=312.59 Aligned_cols=237 Identities=22% Similarity=0.295 Sum_probs=194.9
Q ss_pred CCCccccccccCCcceee---------cceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecC--CeEE
Q 040702 513 RFSENNLIGRGGFGPVYK---------DGMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSND--DFKA 580 (797)
Q Consensus 513 ~f~~~~~lg~G~~g~Vyk---------~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~--~~~~ 580 (797)
.|+..+.||+|+||.||+ .++.||||+++.... ...+.+.+|++++++++||||+++++++.+. ...+
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 348899999999999964 358899999975532 2346789999999999999999999999874 5789
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCc
Q 040702 581 LVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~ 660 (797)
+||||+++|+|.+++.... +++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 112 lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 9999999999999997764 899999999999999999999 89999999999999999999999999999987644
Q ss_pred cCcc-ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh-------------------------
Q 040702 661 EDQS-LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE------------------------- 714 (797)
Q Consensus 661 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~------------------------- 714 (797)
.... .......||..|+|||.+.+..++.++|+|++|+..+..+....++....
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 3221 12344568889999999999999999999999999866555433322111
Q ss_pred -------hhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHHhc
Q 040702 715 -------KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELER 754 (797)
Q Consensus 715 -------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~ 754 (797)
......+.++++.|++.||++||++.|+++.|+.+.+-..
T Consensus 267 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 1123457789999999999999999999999998876544
No 157
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.2e-35 Score=307.16 Aligned_cols=236 Identities=22% Similarity=0.256 Sum_probs=197.9
Q ss_pred hcCCCccccccccCCcceeec----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEcc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEYM 586 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~~ 586 (797)
.++|...+.||+|+||.||++ +..||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 367899999999999999974 57899999975543 3468999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcccc
Q 040702 587 PLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLT 666 (797)
Q Consensus 587 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 666 (797)
++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~ 161 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 161 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc-ccc
Confidence 999999999877667899999999999999999999 9999999999999999999999999999998653321 112
Q ss_pred ccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcccccchhcc
Q 040702 667 QTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQPMVRMG 728 (797)
Q Consensus 667 ~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~l~~~c 728 (797)
.....||+.|+|||.+....++.++|+|++|+..+..+. +..++... +......+.++++.|
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~ 241 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 241 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHH
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHH
Confidence 234567889999999998899999999999998866554 33322211 111233567889999
Q ss_pred ccCCCCCCCChHHHHHhHHHHHH
Q 040702 729 TDLSLGQFPASYSISKYLVYIRE 751 (797)
Q Consensus 729 l~~dp~~RPs~~~i~~~l~~i~~ 751 (797)
++.||++||++.++++.|+.+.+
T Consensus 242 l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 242 WRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999988764
No 158
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-35 Score=315.80 Aligned_cols=240 Identities=22% Similarity=0.309 Sum_probs=190.4
Q ss_pred cCCCccccccccCCcceeecc---------eEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKDG---------MEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~~---------~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 581 (797)
++|...+.||+|+||.||++. ..||||+++.... .....+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467778999999999999852 3599999975432 234578899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
||||+++|+|.+++......+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999876667999999999999999999999 899999999999999999999999999999876433
Q ss_pred Ccc-ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcccc
Q 040702 662 DQS-LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQ 722 (797)
Q Consensus 662 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~ 722 (797)
... .......+|+.|+|||.+....++.++|+|++|+..+..+. +..++... +......+.
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 280 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIY 280 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHH
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHH
Confidence 211 12233456889999999998899999999999998865543 33222111 112234567
Q ss_pred cchhccccCCCCCCCChHHHHHhHHHHHHHhc
Q 040702 723 PMVRMGTDLSLGQFPASYSISKYLVYIRELER 754 (797)
Q Consensus 723 ~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~ 754 (797)
++++.||+.||.+||++.++++.++.+.....
T Consensus 281 ~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 281 QLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 88999999999999999999999988765533
No 159
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.5e-35 Score=315.15 Aligned_cols=239 Identities=20% Similarity=0.295 Sum_probs=196.9
Q ss_pred hcCCCccccccccCCcceeec---------ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCC--eE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD---------GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDD--FK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~---------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~--~~ 579 (797)
.++|+..+.||+|+||.||++ ++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 357899999999999999964 5889999998665555678999999999999999999999987654 68
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
++||||+++|+|.+++......+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999999887666899999999999999999999 8999999999999999999999999999998764
Q ss_pred ccCccc-cccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh-------------------------
Q 040702 660 EEDQSL-TQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE------------------------- 713 (797)
Q Consensus 660 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~------------------------- 713 (797)
...... ......+|..|+|||.+.+..++.++|+|++|+..+..+....+....
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 276 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence 432211 123345788899999999999999999999999875554432221110
Q ss_pred --------hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 714 --------EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 714 --------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
+......+.++++.|++.||++||++.++++.++.+++.
T Consensus 277 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 277 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 111224567899999999999999999999999988654
No 160
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=318.54 Aligned_cols=226 Identities=22% Similarity=0.284 Sum_probs=174.6
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
..++|+..+.||+|+||.||++ ++.||||+++... ..+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3578999999999999999984 5789999997553 34678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC---CCcEEEEeecCCccCCcc
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~---~~~~kl~DFGla~~~~~~ 661 (797)
|+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 999999999997654 4899999999999999999999 899999999999999975 889999999999865322
Q ss_pred CccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh---------------------hhhhcc
Q 040702 662 DQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE---------------------KHLMTK 720 (797)
Q Consensus 662 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~---------------------~~~~~~ 720 (797)
. ......||+.|+|||.+.+..++.++|+|++|+..++.+.+..++.... ......
T Consensus 205 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 281 (349)
T 2w4o_A 205 V---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLN 281 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHH
T ss_pred c---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHH
Confidence 1 2344679999999999998899999999999998866555443322111 112335
Q ss_pred cccchhccccCCCCCCCChHHHHH
Q 040702 721 EQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 721 ~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
+.++++.|+..||++||++.|+++
T Consensus 282 ~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 282 AKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 667999999999999999988765
No 161
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=5.7e-35 Score=327.16 Aligned_cols=228 Identities=22% Similarity=0.292 Sum_probs=192.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|...+.||+|+||.||++ ++.||||++.... ....+.+.+|+.+++.++||||+++++++..++..|+|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 368999999999999999975 6899999997652 23346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 99999999999997654 4899999999999999999999 9999999999999999999999999999998654322
Q ss_pred ccccccccccCcccccccccccCcc-chHHHHHHHhhhhhhhhccccccchh----------------hhhhhcccccch
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEM-RLKCWVNDSLLISVMIVVDANLLIRE----------------EKHLMTKEQPMV 725 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~dv~s~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~ 725 (797)
.....+||+.|+|||.+.+..+ +.++|+|++|+..+..+.+..++... +......+.+++
T Consensus 171 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~Li 247 (476)
T 2y94_A 171 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLL 247 (476)
T ss_dssp ---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTTCCHHHHHHH
T ss_pred ---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCccCCHHHHHHH
Confidence 2345679999999999988766 68999999999986665544433221 111234567899
Q ss_pred hccccCCCCCCCChHHHHHh
Q 040702 726 RMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 726 ~~cl~~dp~~RPs~~~i~~~ 745 (797)
+.|+..||++||++.|+++.
T Consensus 248 ~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 248 KHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp HHHTCSSTTTSCCHHHHHTC
T ss_pred HHHcCCCchhCcCHHHHHhC
Confidence 99999999999999999874
No 162
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-34 Score=312.80 Aligned_cols=238 Identities=22% Similarity=0.251 Sum_probs=187.5
Q ss_pred HHHhcCCCccccccccCCcceeec---ceEEEEEEEEeccCCcchhHHHHHHHhhhc--cCCceeEeeeeeecC----Ce
Q 040702 508 FQATNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGGAFKSFDIECGMMKRI--RHRNLIKIISSCSND----DF 578 (797)
Q Consensus 508 ~~~~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l--~Hpniv~l~~~~~~~----~~ 578 (797)
....++|+..+.||+|+||.||++ ++.||||++.... ...+..|.+++... +||||+++++++... ..
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred cccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 334578999999999999999985 6899999986442 24455566666554 899999999999877 68
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCC--------CeEEcCCCCCceEEcCCCcEEEE
Q 040702 579 KALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSV--------PIIHCDLKPSNVLLDDNMVAHLS 650 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~--------~ivHrDlkp~NIll~~~~~~kl~ 650 (797)
.|+||||+++|+|.++++... +++..++.++.|++.||+||| +. +|+||||||+||+++.++.+||+
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred eEEEEeccCCCcHHHHhhccC--CCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 999999999999999997763 899999999999999999999 77 99999999999999999999999
Q ss_pred eecCCccCCccCccc--cccccccCcccccccccccCccch------HHHHHHHhhhhhhhhccc----------cccch
Q 040702 651 DFGMAKPLLEEDQSL--TQTQTLATIGYMAPDEIFSGEMRL------KCWVNDSLLISVMIVVDA----------NLLIR 712 (797)
Q Consensus 651 DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~------~~dv~s~~~~~~~~~~~~----------~~~~~ 712 (797)
|||+++......... ......||+.|+|||.+.+..+.. ++|+|++|+..++.+.+. .++..
T Consensus 185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 999997654332211 123457999999999987665444 499999999886555431 11110
Q ss_pred h----------------------------hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHHh
Q 040702 713 E----------------------------EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELE 753 (797)
Q Consensus 713 ~----------------------------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~ 753 (797)
. .......+.++++.||+.||++||++.++++.|+.+.+..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 265 LVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred hcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 0 0122234678999999999999999999999999887653
No 163
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=308.35 Aligned_cols=228 Identities=23% Similarity=0.317 Sum_probs=185.2
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccC-----CcchhHHHHHHHhhhcc---CCceeEeeeeeecC
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-----GAFKSFDIECGMMKRIR---HRNLIKIISSCSND 576 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~---Hpniv~l~~~~~~~ 576 (797)
.+++|+..+.||+|+||.||++ ++.||||+++.... .....+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3679999999999999999975 58999999976532 12356788888888775 99999999999876
Q ss_pred C-----eEEEEEEccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEE
Q 040702 577 D-----FKALVLEYMPLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLS 650 (797)
Q Consensus 577 ~-----~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 650 (797)
. ..++||||+. |+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 5 5899999997 599999987653 4899999999999999999999 8999999999999999999999999
Q ss_pred eecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhhh---------------
Q 040702 651 DFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREEK--------------- 715 (797)
Q Consensus 651 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~--------------- 715 (797)
|||+++...... ......||+.|+|||.+.+..++.++|+|++|+..+..+....++.....
T Consensus 163 Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 163 DFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239 (308)
T ss_dssp SCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred eCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 999998653322 23456799999999999999999999999999988666555444322111
Q ss_pred ----------------------------hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 ----------------------------HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 ----------------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
+....+.++++.|++.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 11223457899999999999999988774
No 164
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.9e-35 Score=306.83 Aligned_cols=230 Identities=17% Similarity=0.293 Sum_probs=192.5
Q ss_pred hcCCCccccccccCCcceeec---ceEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeeecC--CeEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCSND--DFKALVL 583 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~--~~~~lv~ 583 (797)
.++|...+.||+|+||.||++ +..||||+++.... ...+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 368999999999999999986 68999999986532 2345789999999999999999999999887 7889999
Q ss_pred EccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCceEEcCCCcEEEEeecCCccCCc
Q 040702 584 EYMPLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVP--IIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~--ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~ 660 (797)
||+++|+|.+++..... .+++..+..++.|+++||+||| +.+ |+||||||+||+++.++.++|+|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~- 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ- 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeec-
Confidence 99999999999987654 5899999999999999999999 888 9999999999999999999999999886432
Q ss_pred cCccccccccccCcccccccccccCccc---hHHHHHHHhhhhhhhhccccccchh------------------hhhhhc
Q 040702 661 EDQSLTQTQTLATIGYMAPDEIFSGEMR---LKCWVNDSLLISVMIVVDANLLIRE------------------EKHLMT 719 (797)
Q Consensus 661 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~dv~s~~~~~~~~~~~~~~~~~~------------------~~~~~~ 719 (797)
.....||+.|+|||.+.+..++ .++|+|++|+..++.+.+..++... +.....
T Consensus 165 ------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (271)
T 3kmu_A 165 ------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISP 238 (271)
T ss_dssp ------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCH
T ss_pred ------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCH
Confidence 2235689999999998876544 4899999999986655554443221 112234
Q ss_pred ccccchhccccCCCCCCCChHHHHHhHHHHH
Q 040702 720 KEQPMVRMGTDLSLGQFPASYSISKYLVYIR 750 (797)
Q Consensus 720 ~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~ 750 (797)
.+.++++.|++.||++||++.++++.++.+.
T Consensus 239 ~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 239 HVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 5678999999999999999999999988764
No 165
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-35 Score=321.97 Aligned_cols=238 Identities=20% Similarity=0.267 Sum_probs=184.5
Q ss_pred cCCCccccccccCCcceeecc--------eEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeec-CCeEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKDG--------MEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSN-DDFKAL 581 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~~--------~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~-~~~~~l 581 (797)
..|...+.||+|+||.||++. ..||||.++.... ...+++.+|+.++++++||||+++++++.. ++..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 356777899999999999752 4689998865432 335679999999999999999999998754 457899
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
||||+++|+|.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999999877667899999999999999999999 899999999999999999999999999999865432
Q ss_pred Ccc--ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhccc
Q 040702 662 DQS--LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKE 721 (797)
Q Consensus 662 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~ 721 (797)
... .......+|+.|+|||.+.+..++.++|+|++|+..++.+. ...++... +......+
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l 325 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 325 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHH
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHH
Confidence 211 12234567889999999999999999999999999866554 22222111 11123456
Q ss_pred ccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 722 QPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 722 ~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
.++++.||+.||++||++.|+++.|+.+...
T Consensus 326 ~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 326 YEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 7889999999999999999999999887554
No 166
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.2e-35 Score=315.33 Aligned_cols=244 Identities=24% Similarity=0.289 Sum_probs=185.7
Q ss_pred hcCCCccccccccCCcceeec---ceEEEEEEEEeccCCcchhHHHHHHH--hhhccCCceeEeeeeee-----cCCeEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGGAFKSFDIECGM--MKRIRHRNLIKIISSCS-----NDDFKA 580 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~~~~~~~E~~~--l~~l~Hpniv~l~~~~~-----~~~~~~ 580 (797)
.++|+..+.||+|+||.||++ ++.||||++.... ...+..|.++ +..++||||+++++++. .....+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 478999999999999999986 6899999997543 2344445444 45689999999998543 233678
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCC---------CeEEcCCCCCceEEcCCCcEEEEe
Q 040702 581 LVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSV---------PIIHCDLKPSNVLLDDNMVAHLSD 651 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~---------~ivHrDlkp~NIll~~~~~~kl~D 651 (797)
+||||+++|+|.+++.... .++..+..++.|+++||+||| +. +|+||||||+|||++.++.+||+|
T Consensus 89 lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp EEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 9999999999999998765 588999999999999999999 77 999999999999999999999999
Q ss_pred ecCCccCCccCc------cccccccccCccccccccccc-------CccchHHHHHHHhhhhhhhhccccc-cchhh---
Q 040702 652 FGMAKPLLEEDQ------SLTQTQTLATIGYMAPDEIFS-------GEMRLKCWVNDSLLISVMIVVDANL-LIREE--- 714 (797)
Q Consensus 652 FGla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~dv~s~~~~~~~~~~~~~~-~~~~~--- 714 (797)
||+++.+..... ........||+.|+|||.+.+ ..++.++|+|++|+..++.+.+..+ +....
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~ 243 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence 999986543211 112234579999999999876 4677899999999998655543221 11000
Q ss_pred --------------------------------h------hhhcccccchhccccCCCCCCCChHHHHHhHHHHHHHhccc
Q 040702 715 --------------------------------K------HLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELERGK 756 (797)
Q Consensus 715 --------------------------------~------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~ 756 (797)
. .....+.++++.||+.||++|||+.|+++.|+.+.......
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 244 YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp CCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred HHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence 0 01124778999999999999999999999999987765555
Q ss_pred cccccc
Q 040702 757 VGITSV 762 (797)
Q Consensus 757 ~~~~~~ 762 (797)
.+..+.
T Consensus 324 ~~~~~~ 329 (336)
T 3g2f_A 324 KSVSPT 329 (336)
T ss_dssp ------
T ss_pred ccCCCc
Confidence 544433
No 167
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=5e-35 Score=319.17 Aligned_cols=237 Identities=16% Similarity=0.178 Sum_probs=194.5
Q ss_pred HhcCCCccccccccCCcceeec----------ceEEEEEEEEeccCCcchhHHHHHHHhhhcc---CCceeEeeeeeecC
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD----------GMEVAIKVFNLQYGGAFKSFDIECGMMKRIR---HRNLIKIISSCSND 576 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~----------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---Hpniv~l~~~~~~~ 576 (797)
..++|...+.||+|+||.||++ ++.||||+++.. ...++..|++++++++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 3578999999999999999987 478999998643 3467788888888886 99999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC---------
Q 040702 577 DFKALVLEYMPLGSLEKCLYS----GNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD--------- 643 (797)
Q Consensus 577 ~~~~lv~e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~--------- 643 (797)
+..|+||||+++|+|.+++.. ....+++..++.|+.||+.||+||| +++|+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999974 2336999999999999999999999 999999999999999988
Q ss_pred --CCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhhh------
Q 040702 644 --NMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREEK------ 715 (797)
Q Consensus 644 --~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~------ 715 (797)
++.+||+|||+|+.+............+||+.|||||.+.+..++.++|+|++|+..++.+.+..++.....
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~ 296 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPE 296 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEEC
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeec
Confidence 899999999999765333333344567899999999999999999999999999998776665543322111
Q ss_pred ------hhhcccccchhccccCCCCCCC-ChHHHHHhHHHHHHH
Q 040702 716 ------HLMTKEQPMVRMGTDLSLGQFP-ASYSISKYLVYIREL 752 (797)
Q Consensus 716 ------~~~~~~~~l~~~cl~~dp~~RP-s~~~i~~~l~~i~~~ 752 (797)
.......+++..|++.+|.+|| ++.++.+.++.+..-
T Consensus 297 ~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 297 GLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp SCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 1123456788889999999985 677788777776443
No 168
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.6e-35 Score=309.20 Aligned_cols=240 Identities=20% Similarity=0.280 Sum_probs=194.5
Q ss_pred HhcCCCccccccccCCcceeecc--------eEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKDG--------MEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKA 580 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~~--------~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 580 (797)
..++|...+.||+|+||.||++. ..||||.++.... ...+.+.+|+.++++++||||+++++++.++ ..|
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 35789999999999999999852 4599999875532 2356789999999999999999999998754 568
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCc
Q 040702 581 LVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~ 660 (797)
+||||+++++|.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999999876656899999999999999999999 99999999999999999999999999999986543
Q ss_pred cCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcccc
Q 040702 661 EDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQ 722 (797)
Q Consensus 661 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~ 722 (797)
... .......+|+.|+|||.+.+..++.++|+|++|+..+..+. +..++... +......+.
T Consensus 166 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 244 (281)
T 3cc6_A 166 EDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLY 244 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHH
T ss_pred ccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHH
Confidence 221 12334567889999999988899999999999998866553 33332110 111233567
Q ss_pred cchhccccCCCCCCCChHHHHHhHHHHHHHhc
Q 040702 723 PMVRMGTDLSLGQFPASYSISKYLVYIRELER 754 (797)
Q Consensus 723 ~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~ 754 (797)
++++.|++.||++||++.|+++.|+.+.+..+
T Consensus 245 ~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 276 (281)
T 3cc6_A 245 TLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276 (281)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence 89999999999999999999999999877644
No 169
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.1e-35 Score=314.13 Aligned_cols=219 Identities=19% Similarity=0.246 Sum_probs=166.2
Q ss_pred cccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhcc-CCceeEeeeeeecCCeEEEEEEccCCCC
Q 040702 517 NNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIR-HRNLIKIISSCSNDDFKALVLEYMPLGS 590 (797)
Q Consensus 517 ~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~lv~e~~~~g~ 590 (797)
.+.||+|+||.||++ ++.||||++... ....+.+|+.+++.+. ||||+++++++.+++..|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999984 688999999754 2467788999999997 9999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC---cEEEEeecCCccCCccCccccc
Q 040702 591 LEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM---VAHLSDFGMAKPLLEEDQSLTQ 667 (797)
Q Consensus 591 L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~---~~kl~DFGla~~~~~~~~~~~~ 667 (797)
|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++....... ..
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~~ 166 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PL 166 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--cc
Confidence 999998765 4899999999999999999999 99999999999999998665 899999999986543222 23
Q ss_pred cccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh---------------------------hhhhcc
Q 040702 668 TQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE---------------------------KHLMTK 720 (797)
Q Consensus 668 ~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~ 720 (797)
...+||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.... ......
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 246 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQE 246 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHH
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHH
Confidence 45678999999999999999999999999999866655544433211 123445
Q ss_pred cccchhccccCCCCCCCChHHHHH
Q 040702 721 EQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 721 ~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
+.++++.|+..||.+||++.|+++
T Consensus 247 ~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 247 AKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred HHHHHHHHCCCChhHCCCHHHHhc
Confidence 678999999999999999888754
No 170
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-35 Score=310.95 Aligned_cols=233 Identities=25% Similarity=0.335 Sum_probs=186.7
Q ss_pred hcCCCccccccccCCcceeec---ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEccC
Q 040702 511 TNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEYMP 587 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~~~ 587 (797)
.++|+..+.||+|+||.||++ ++.||||.+... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred HhHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 367889999999999999985 688999998633 345789999999999999999999999874 4799999999
Q ss_pred CCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCc-EEEEeecCCccCCccCcc
Q 040702 588 LGSLEKCLYSGNY--ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV-AHLSDFGMAKPLLEEDQS 664 (797)
Q Consensus 588 ~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~-~kl~DFGla~~~~~~~~~ 664 (797)
+|+|.+++..... .+++..++.++.|+++||+|||+.+.++|+||||||+||+++.++. +||+|||+++.....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999987653 4788899999999999999999322289999999999999998886 799999999754321
Q ss_pred ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh-------------------hhhhhcccccch
Q 040702 665 LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE-------------------EKHLMTKEQPMV 725 (797)
Q Consensus 665 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~l~ 725 (797)
.....||+.|+|||.+.+..++.++|+|++|+..++.+.+..++... .......+.+++
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 237 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 237 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHH
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHH
Confidence 23346999999999999889999999999999886665554443211 011233567889
Q ss_pred hccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 726 RMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 726 ~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
+.|++.||++||++.++++.++.+.+.
T Consensus 238 ~~~l~~dp~~Rps~~ell~~L~~~~~~ 264 (307)
T 2eva_A 238 TRCWSKDPSQRPSMEEIVKIMTHLMRY 264 (307)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred HHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999887655
No 171
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.1e-35 Score=310.44 Aligned_cols=239 Identities=21% Similarity=0.272 Sum_probs=193.4
Q ss_pred hcCCCccccccccCCcceeecc--------eEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeee-cCCeEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKDG--------MEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCS-NDDFKA 580 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~~--------~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~-~~~~~~ 580 (797)
..+|...+.||+|+||.||++. ..||||.+..... ...+.+.+|+.++++++||||+++++++. .++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3578888999999999999752 3589998865432 23467889999999999999999999865 456789
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCc
Q 040702 581 LVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~ 660 (797)
+||||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999999876667899999999999999999999 99999999999999999999999999999986643
Q ss_pred cCc--cccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcc
Q 040702 661 EDQ--SLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTK 720 (797)
Q Consensus 661 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~ 720 (797)
... ........||+.|+|||.+.+..++.++|+|++|+..+..+. ...++... +......
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 260 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHH
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHH
Confidence 321 122344568889999999999999999999999999865554 22222111 1112335
Q ss_pred cccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 721 EQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 721 ~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
+.++++.|++.||++||++.++++.++.+...
T Consensus 261 l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 261 LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 67899999999999999999999999887553
No 172
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.2e-33 Score=303.83 Aligned_cols=295 Identities=19% Similarity=0.220 Sum_probs=187.8
Q ss_pred CCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeee
Q 040702 77 STLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLG 156 (797)
Q Consensus 77 ~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~ 156 (797)
.+++.++++++.++ .+|.... ++|++|+|++|++++..+..|.++++|++|+|++|+|+++.|.+|.++++|++|+
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCCeEEEecCCCcc-ccCccCC---CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 36788888888887 7776553 6888899999988877777888899999999999999988888999999999999
Q ss_pred ccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccc--cCChhhhhhhhhHhhh
Q 040702 157 LNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISG--SIPEEINNLTNLILQL 234 (797)
Q Consensus 157 L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~--~~p~~~~~l~~L~L~~ 234 (797)
|++|.++.++..+ + ++|+.|++++|++.++.+..|.+++ +|+.|++++|.+.. ..+..+..+++| ++
T Consensus 107 Ls~n~l~~l~~~~-----~---~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~l~~L--~~ 175 (330)
T 1xku_A 107 LSKNQLKELPEKM-----P---KTLQELRVHENEITKVRKSVFNGLN-QMIVVELGTNPLKSSGIENGAFQGMKKL--SY 175 (330)
T ss_dssp CCSSCCSBCCSSC-----C---TTCCEEECCSSCCCBBCHHHHTTCT-TCCEEECCSSCCCGGGBCTTGGGGCTTC--CE
T ss_pred CCCCcCCccChhh-----c---ccccEEECCCCcccccCHhHhcCCc-cccEEECCCCcCCccCcChhhccCCCCc--CE
Confidence 9999998887653 2 6788999999998888777888877 78888888877753 445555555555 55
Q ss_pred cccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCC-CCCCCCcccEEEccCCcC
Q 040702 235 LSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPS-TLWNLKDILHLNLSSNFF 313 (797)
Q Consensus 235 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~l~~N~l 313 (797)
|++++|.++.+ |..+. ++|++|++++|++++..+..|..+++|+.|+|++|.++.++. .+..+++|+.|++++|.+
T Consensus 176 L~l~~n~l~~l-~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 252 (330)
T 1xku_A 176 IRIADTNITTI-PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL 252 (330)
T ss_dssp EECCSSCCCSC-CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCC
T ss_pred EECCCCccccC-Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcC
Confidence 55555555532 22221 455555555555555555555555555555555555544433 344444555555555554
Q ss_pred CCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCC--CCCh
Q 040702 314 TGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSG--TIPI 391 (797)
Q Consensus 314 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~ 391 (797)
+ .+|..+..+++|++|++++|+|+++.+..|.... .......++.|++++|.+.. ..|.
T Consensus 253 ~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~~l~~l~l~~N~~~~~~i~~~ 313 (330)
T 1xku_A 253 V-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGVSLFSNPVQYWEIQPS 313 (330)
T ss_dssp S-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSCCCSEEECCSSSSCGGGSCGG
T ss_pred c-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc------------------cccccccccceEeecCcccccccCcc
Confidence 4 3344444444444444444444444333332210 00012456666666666642 4556
Q ss_pred hhhccCCCCeEEccCCc
Q 040702 392 SLEKLLDLKDINVSFNR 408 (797)
Q Consensus 392 ~~~~l~~L~~L~l~~N~ 408 (797)
.|..+.+++.+++++|+
T Consensus 314 ~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 314 TFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp GGTTCCCGGGEEC----
T ss_pred ccccccceeEEEecccC
Confidence 66666777777776664
No 173
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1e-34 Score=309.73 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=185.7
Q ss_pred HHHhcCCCccccccccCCcceeec--------ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCC
Q 040702 508 FQATNRFSENNLIGRGGFGPVYKD--------GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDD 577 (797)
Q Consensus 508 ~~~~~~f~~~~~lg~G~~g~Vyk~--------~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~ 577 (797)
....++|...+.||+|+||.||++ +..||||+++..... ..+.+.+|+.++++++||||+++++++...+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 335578999999999999999974 347999998765322 3467889999999999999999999998765
Q ss_pred -----eEEEEEEccCCCCHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcE
Q 040702 578 -----FKALVLEYMPLGSLEKCLYS-----GNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVA 647 (797)
Q Consensus 578 -----~~~lv~e~~~~g~L~~~l~~-----~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~ 647 (797)
..++||||+++|+|.+++.. ....+++..++.++.|+++||.||| +.+|+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcE
Confidence 35999999999999999843 2235899999999999999999999 9999999999999999999999
Q ss_pred EEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-------------
Q 040702 648 HLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE------------- 713 (797)
Q Consensus 648 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~------------- 713 (797)
||+|||+++...............+++.|+|||.+.+..++.++|+|++|+..+..+. +..++...
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 266 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH 266 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCC
Confidence 9999999987644333233344567889999999999999999999999998866555 33222211
Q ss_pred ----hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 714 ----EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 714 ----~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
+......+.++++.|+..||.+||++.++++.|+.+.+.
T Consensus 267 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 267 RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 112234577899999999999999999999999887543
No 174
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.8e-35 Score=316.22 Aligned_cols=226 Identities=19% Similarity=0.286 Sum_probs=188.0
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
..++|+..+.||+|+||.||++ ++.||||+++... ....+|++++.++ +||||+++++++.+++..|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3578999999999999999974 6899999997553 3356788889888 7999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCC----CcEEEEeecCCccCC
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN----MVAHLSDFGMAKPLL 659 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~----~~~kl~DFGla~~~~ 659 (797)
||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||++.+. +.+||+|||+++...
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999997665 4899999999999999999999 9999999999999998533 359999999998654
Q ss_pred ccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh-----------------------hh
Q 040702 660 EEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE-----------------------KH 716 (797)
Q Consensus 660 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-----------------------~~ 716 (797)
.... .....+||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.... ..
T Consensus 172 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 249 (342)
T 2qr7_A 172 AENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS 249 (342)
T ss_dssp CTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTT
T ss_pred CCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcccccc
Confidence 3322 2345689999999999988889999999999999866665544433210 12
Q ss_pred hhcccccchhccccCCCCCCCChHHHHHh
Q 040702 717 LMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 717 ~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
....+.++++.|+..||++||++.++++.
T Consensus 250 ~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 250 VSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 23456789999999999999999998874
No 175
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.1e-34 Score=310.52 Aligned_cols=227 Identities=20% Similarity=0.275 Sum_probs=191.7
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC------cchhHHHHHHHhhhccCCceeEeeeeeecCCeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG------AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 579 (797)
.++|...+.||+|+||.||++ ++.||||+++..... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467999999999999999984 688999999866432 245789999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC----cEEEEeecCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM----VAHLSDFGMA 655 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~----~~kl~DFGla 655 (797)
++||||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 99999999999999997654 4899999999999999999999 89999999999999999887 7999999999
Q ss_pred ccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh--------------------hh
Q 040702 656 KPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE--------------------EK 715 (797)
Q Consensus 656 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~--------------------~~ 715 (797)
+...... ......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++... ..
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 243 (321)
T 2a2a_A 167 HEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243 (321)
T ss_dssp EECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHT
T ss_pred eecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhc
Confidence 8654322 224457999999999999889999999999999886555544433211 11
Q ss_pred hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 ~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.....+.++++.|+..||++||++.|+++
T Consensus 244 ~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 244 HTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp TCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 22335678999999999999999988875
No 176
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.6e-35 Score=306.22 Aligned_cols=242 Identities=19% Similarity=0.222 Sum_probs=197.2
Q ss_pred hcCCCccc-cccccCCcceeec-------ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEE
Q 040702 511 TNRFSENN-LIGRGGFGPVYKD-------GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 511 ~~~f~~~~-~lg~G~~g~Vyk~-------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 581 (797)
.++|...+ .||+|+||.||++ +..||||+++.... ...+.+.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 35666665 9999999999974 46799999976532 2356789999999999999999999999 4556899
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
||||+++|+|.+++......+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 99999999999999776667999999999999999999999 899999999999999999999999999999876433
Q ss_pred Ccc-ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccch-----------------hhhhhhcccc
Q 040702 662 DQS-LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIR-----------------EEKHLMTKEQ 722 (797)
Q Consensus 662 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~-----------------~~~~~~~~~~ 722 (797)
... .......||+.|+|||.+.+..++.++|+|++|+..+..+. +..++.. .+......+.
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~ 243 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELY 243 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHH
Confidence 221 12233457899999999988899999999999998866553 3333221 1112334667
Q ss_pred cchhccccCCCCCCCChHHHHHhHHHHHHHhccc
Q 040702 723 PMVRMGTDLSLGQFPASYSISKYLVYIRELERGK 756 (797)
Q Consensus 723 ~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~ 756 (797)
++++.|++.||++||++.++++.++.+..-....
T Consensus 244 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 244 ALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 7899999999999999999999999986654443
No 177
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.3e-35 Score=309.22 Aligned_cols=238 Identities=20% Similarity=0.233 Sum_probs=192.3
Q ss_pred HhcCCCccc-cccccCCcceeec-------ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCCeE
Q 040702 510 ATNRFSENN-LIGRGGFGPVYKD-------GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFK 579 (797)
Q Consensus 510 ~~~~f~~~~-~lg~G~~g~Vyk~-------~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 579 (797)
..++|...+ .||+|+||.||++ ++.||||+++..... ..+++.+|+++++.++||||+++++++ ..+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 346788877 9999999999986 578999999765322 246789999999999999999999999 56678
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
++||||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 99999999999999998765 4899999999999999999999 8999999999999999999999999999998664
Q ss_pred ccCcc-ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcc
Q 040702 660 EEDQS-LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTK 720 (797)
Q Consensus 660 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~ 720 (797)
..... .......||+.|+|||.+.+..++.++|+|++|+..+..+. +..++... +......
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE 248 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHH
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHH
Confidence 33221 11233457789999999998899999999999998866554 33332221 1122346
Q ss_pred cccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 721 EQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 721 ~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
+.++++.|++.||.+||++.++++.|+.+-..
T Consensus 249 l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 249 MYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 77899999999999999999999999887544
No 178
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.9e-35 Score=331.69 Aligned_cols=235 Identities=20% Similarity=0.263 Sum_probs=194.3
Q ss_pred HHhcCCCccccccccCCcceeec----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 509 QATNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 509 ~~~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
...++|...+.||+|+||.||++ +..||||+++... ...+.|.+|+.++++++||||+++++++. .+..|+|||
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 34578999999999999999985 5789999997543 34678999999999999999999999986 567899999
Q ss_pred ccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 585 YMPLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
|+++|+|.+++..... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~- 338 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE- 338 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-
Confidence 9999999999975432 5788999999999999999999 8999999999999999999999999999998654321
Q ss_pred cccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcccccch
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQPMV 725 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~l~ 725 (797)
........+|..|+|||.+..+.++.++|||++|+..++.+. +..++... +......+.+++
T Consensus 339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li 418 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIM 418 (454)
T ss_dssp HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHH
T ss_pred eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 112234457889999999998999999999999999866554 33332211 112234567889
Q ss_pred hccccCCCCCCCChHHHHHhHHHH
Q 040702 726 RMGTDLSLGQFPASYSISKYLVYI 749 (797)
Q Consensus 726 ~~cl~~dp~~RPs~~~i~~~l~~i 749 (797)
+.||+.||++||++.++.+.|+.+
T Consensus 419 ~~cl~~dp~~RPt~~~i~~~L~~~ 442 (454)
T 1qcf_A 419 MRCWKNRPEERPTFEYIQSVLDDF 442 (454)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHccCChhHCcCHHHHHHHHHHH
Confidence 999999999999999999888765
No 179
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=8.5e-35 Score=304.55 Aligned_cols=227 Identities=22% Similarity=0.283 Sum_probs=191.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
.++|...+.||+|+||.||++ +..||+|.+........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 468999999999999999985 578999999877666678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE---cCCCcEEEEeecCCccCCccC
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll---~~~~~~kl~DFGla~~~~~~~ 662 (797)
+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999999887654 4899999999999999999999 9999999999999999 788999999999998654332
Q ss_pred ccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhcccc
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMTKEQ 722 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~ 722 (797)
......||+.|+|||.+. +.++.++|+|++|+..+..+....++.... ......+.
T Consensus 164 ---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (277)
T 3f3z_A 164 ---MMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAE 239 (277)
T ss_dssp ---CBCCCCSCTTTCCHHHHT-TCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHH
T ss_pred ---chhccCCCCCccChHHhc-ccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHH
Confidence 234467999999999875 458999999999998765554443322111 02344677
Q ss_pred cchhccccCCCCCCCChHHHHHh
Q 040702 723 PMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 723 ~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
++++.|++.||++||++.++++.
T Consensus 240 ~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 240 SLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 89999999999999999988764
No 180
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=7.8e-35 Score=306.66 Aligned_cols=238 Identities=21% Similarity=0.303 Sum_probs=199.2
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
..++|...+.||+|+||.||++ +..||||++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4578999999999999999985 6889999997543 345788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 585 YMPLGSLEKCLYSGN-YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
|+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 165 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT- 165 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc-
Confidence 999999999997643 35899999999999999999999 8999999999999999999999999999998664332
Q ss_pred cccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcccccch
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQPMV 725 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~l~ 725 (797)
........+|+.|+|||.+.+..++.++|+|++|+..+..+. +..++... +......+.+++
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 245 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 245 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHH
Confidence 223344567889999999998999999999999999865554 33222211 112233567899
Q ss_pred hccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 726 RMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 726 ~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
+.|+..||.+||++.++++.++.+...
T Consensus 246 ~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 246 RACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999887554
No 181
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.4e-35 Score=324.32 Aligned_cols=227 Identities=22% Similarity=0.228 Sum_probs=178.3
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEecc--------CCcchhHHHHHHHhhhccCCceeEeeeeeecC
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY--------GGAFKSFDIECGMMKRIRHRNLIKIISSCSND 576 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~ 576 (797)
..++|...+.||+|+||.||++ ++.||||++.... ......+.+|+.++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 4678999999999999999985 5899999997642 1123468899999999999999999999754
Q ss_pred CeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC---cEEEEeec
Q 040702 577 DFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM---VAHLSDFG 653 (797)
Q Consensus 577 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~---~~kl~DFG 653 (797)
+..|+||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++ .+||+|||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecc
Confidence 45799999999999999887654 4899999999999999999999 89999999999999997544 59999999
Q ss_pred CCccCCccCccccccccccCccccccccccc---CccchHHHHHHHhhhhhhhhccccccchh-----------------
Q 040702 654 MAKPLLEEDQSLTQTQTLATIGYMAPDEIFS---GEMRLKCWVNDSLLISVMIVVDANLLIRE----------------- 713 (797)
Q Consensus 654 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~dv~s~~~~~~~~~~~~~~~~~~----------------- 713 (797)
+|+...... .....+||+.|+|||.+.. ..++.++|+|++|+..+..+.+..++...
T Consensus 288 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~ 364 (419)
T 3i6u_A 288 HSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 364 (419)
T ss_dssp TTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCC
T ss_pred cceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCC
Confidence 998764322 2345679999999999863 67889999999999886655544333211
Q ss_pred ----hhhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 714 ----EKHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 714 ----~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.......+.++++.|++.||++||++.|+++
T Consensus 365 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 365 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0123345678999999999999999988765
No 182
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.5e-34 Score=303.99 Aligned_cols=237 Identities=21% Similarity=0.268 Sum_probs=191.8
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeee-ecCCeEEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSC-SNDDFKALVL 583 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~-~~~~~~~lv~ 583 (797)
..++|+..+.||+|+||.||++ ++.||||++..... .+.+.+|+++++.++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 3578999999999999999975 58999998765533 36789999999999988777666655 6677889999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE---cCCCcEEEEeecCCccCCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll---~~~~~~kl~DFGla~~~~~ 660 (797)
||+ +|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 89999999866556999999999999999999999 9999999999999999 7889999999999986643
Q ss_pred cCcc-----ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh---------------------
Q 040702 661 EDQS-----LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------- 714 (797)
Q Consensus 661 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------- 714 (797)
.... .......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++....
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 240 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhh
Confidence 3221 12235679999999999999999999999999998866555444332210
Q ss_pred ---hhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 715 ---KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 715 ---~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
......+.++++.|++.||++||++.++++.++.+.+-
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 241 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 11244678899999999999999999999999887654
No 183
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.9e-35 Score=311.10 Aligned_cols=241 Identities=22% Similarity=0.295 Sum_probs=187.3
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC---CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG---GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|...+.||+|+||.||++ +..||||+++.... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 468999999999999999974 68999999975422 2345788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 583 LEYMPLGSLEKCLYS---GNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
|||+++|+|.+++.. ....+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999864 2345899999999999999999999 8999999999999999999999999999998653
Q ss_pred ccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhc
Q 040702 660 EEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMT 719 (797)
Q Consensus 660 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~ 719 (797)
.... ......||+.|+|||.+.+..++.++|+|++|+..+..+....++.... .....
T Consensus 188 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (310)
T 2wqm_A 188 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE 265 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCH
T ss_pred CCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCH
Confidence 3221 2234579999999999999999999999999998755554433322110 12234
Q ss_pred ccccchhccccCCCCCCCChHHHHHhHHHHHHHhccc
Q 040702 720 KEQPMVRMGTDLSLGQFPASYSISKYLVYIRELERGK 756 (797)
Q Consensus 720 ~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~~~ 756 (797)
.+.++++.|++.||++||++.++++.++.++....+.
T Consensus 266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 5778899999999999999999999999987764443
No 184
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=315.89 Aligned_cols=230 Identities=20% Similarity=0.251 Sum_probs=183.4
Q ss_pred hcCCCccccccccCCcceeec----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccC--CceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRH--RNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~H--pniv~l~~~~~~~~~~~lv 582 (797)
.++|+..+.||+|+||.||++ ++.||||++...... ..+.+.+|+.++++++| |||+++++++..++..|+|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 357999999999999999975 688999999865432 24678899999999986 9999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
||+ .+|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++ ++.+||+|||+++......
T Consensus 88 ~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp ECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred EeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 995 5789999998765 4899999999999999999999 89999999999999997 5789999999998765443
Q ss_pred ccccccccccCccccccccccc-----------CccchHHHHHHHhhhhhhhhccccccchh------------------
Q 040702 663 QSLTQTQTLATIGYMAPDEIFS-----------GEMRLKCWVNDSLLISVMIVVDANLLIRE------------------ 713 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~dv~s~~~~~~~~~~~~~~~~~~------------------ 713 (797)
.........||+.|+|||.+.+ +.++.++|+|++|+..+..+.+..++...
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 241 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCC
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccC
Confidence 3333445689999999998865 67899999999999986666554443221
Q ss_pred -hhhhhcccccchhccccCCCCCCCChHHHHHhH
Q 040702 714 -EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYL 746 (797)
Q Consensus 714 -~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l 746 (797)
+......+.++++.|++.||.+||++.|+++.-
T Consensus 242 ~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 242 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 011122467899999999999999999998753
No 185
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.8e-35 Score=306.00 Aligned_cols=229 Identities=22% Similarity=0.326 Sum_probs=171.8
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|...+.||+|+||.||++ ++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 468999999999999999975 5789999997552 23346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+++++|.+++......+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999876667899999999999999999999 8999999999999999999999999999998654222
Q ss_pred ccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh----------------hhhhhcccccchh
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE----------------EKHLMTKEQPMVR 726 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~ 726 (797)
. ......||+.|+|||.+.+..++.++|+|++|+..+..+....++... +......+.++++
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 244 (278)
T 3cok_A 167 E--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIH 244 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHHH
T ss_pred C--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHHHH
Confidence 1 223457999999999999888999999999999876555444332211 1112335568899
Q ss_pred ccccCCCCCCCChHHHHH
Q 040702 727 MGTDLSLGQFPASYSISK 744 (797)
Q Consensus 727 ~cl~~dp~~RPs~~~i~~ 744 (797)
.|++.||++||++.++++
T Consensus 245 ~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 245 QLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp HHSCSSGGGSCCHHHHTT
T ss_pred HHcccCHhhCCCHHHHhc
Confidence 999999999999888764
No 186
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-35 Score=308.90 Aligned_cols=237 Identities=19% Similarity=0.231 Sum_probs=193.8
Q ss_pred CCCccccccccCCcceeecc--------eEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeE-EEE
Q 040702 513 RFSENNLIGRGGFGPVYKDG--------MEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFK-ALV 582 (797)
Q Consensus 513 ~f~~~~~lg~G~~g~Vyk~~--------~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~-~lv 582 (797)
.|...+.||+|+||.||++. ..||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45667899999999999752 3799999865432 2346788999999999999999999999876654 999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+.+|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999886667899999999999999999999 8999999999999999999999999999998654332
Q ss_pred c--cccccccccCcccccccccccCccchHHHHHHHhhhhhhhhcc-ccccchh-----------------hhhhhcccc
Q 040702 663 Q--SLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVD-ANLLIRE-----------------EKHLMTKEQ 722 (797)
Q Consensus 663 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~-~~~~~~~-----------------~~~~~~~~~ 722 (797)
. ........||+.|+|||.+.+..++.++|+|++|+..+..+.. ..++... +......+.
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLY 258 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHH
Confidence 1 1223445688999999999999999999999999988665542 2221111 111233567
Q ss_pred cchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 723 PMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 723 ~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
++++.|++.||.+||++.++++.++.+...
T Consensus 259 ~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 259 QVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 899999999999999999999999887554
No 187
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.7e-35 Score=312.81 Aligned_cols=230 Identities=17% Similarity=0.296 Sum_probs=180.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCc---chhHHHHHHHhhhccCCceeEeeeeeecCC----e
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGA---FKSFDIECGMMKRIRHRNLIKIISSCSNDD----F 578 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~---~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~----~ 578 (797)
.++|+..+.||+|+||.||++ ++.||||+++...... ...+.+|+.++++++||||+++++++...+ .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 468999999999999999974 6899999997653322 356889999999999999999999987654 3
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccC
Q 040702 579 KALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 658 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~ 658 (797)
.|+||||+++|+|.+++.... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 499999999999999997654 4899999999999999999999 899999999999999999999999999999866
Q ss_pred CccCcc-ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhh
Q 040702 659 LEEDQS-LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHL 717 (797)
Q Consensus 659 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~ 717 (797)
...... .......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.... ...
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 246 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTC
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCC
Confidence 433221 22344579999999999999999999999999999866665544432211 112
Q ss_pred hcccccchhccccCCCCCCCChHHHHH
Q 040702 718 MTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 718 ~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
...+.++++.|++.||++||++.+++.
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 345678899999999999998766554
No 188
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.8e-35 Score=305.68 Aligned_cols=229 Identities=22% Similarity=0.305 Sum_probs=189.7
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 581 (797)
+.++|+..+.||+|+||.||++ +..||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3578999999999999999985 5789999997542 2234678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 999999999999987654 4899999999999999999999 999999999999999999999999999998654322
Q ss_pred CccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh----------------hhhhcccccch
Q 040702 662 DQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE----------------KHLMTKEQPMV 725 (797)
Q Consensus 662 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~ 725 (797)
......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.... ......+.+++
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 238 (279)
T 3fdn_A 163 ----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 238 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHH
T ss_pred ----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHH
Confidence 2234579999999999998889999999999998865555444332211 11233467899
Q ss_pred hccccCCCCCCCChHHHHHhH
Q 040702 726 RMGTDLSLGQFPASYSISKYL 746 (797)
Q Consensus 726 ~~cl~~dp~~RPs~~~i~~~l 746 (797)
+.|++.||.+||++.|+++.-
T Consensus 239 ~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 239 SRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp HHHCCSSGGGSCCHHHHHHCH
T ss_pred HHHhccChhhCCCHHHHhhCc
Confidence 999999999999999999853
No 189
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.3e-34 Score=302.20 Aligned_cols=236 Identities=21% Similarity=0.269 Sum_probs=194.7
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeee-ecCCeEEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSC-SNDDFKALVLE 584 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~-~~~~~~~lv~e 584 (797)
.++|...+.||+|+||.||++ ++.||||++..... .+.+.+|+.+++.++|++++..++++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 468999999999999999975 68999999875533 46789999999999988766666555 56778899999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE---cCCCcEEEEeecCCccCCcc
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll---~~~~~~kl~DFGla~~~~~~ 661 (797)
|+ +++|.+++......+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 89999999865556999999999999999999999 9999999999999999 48889999999999866433
Q ss_pred Ccc-----ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh----------------------
Q 040702 662 DQS-----LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE---------------------- 714 (797)
Q Consensus 662 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~---------------------- 714 (797)
... .......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++....
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 241 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHH
Confidence 221 12245679999999999999999999999999999866555544432210
Q ss_pred --hhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 715 --KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 715 --~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
......+.++++.|++.||++||++.++.+.++.+..-
T Consensus 242 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 242 LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 12234677899999999999999999999999987655
No 190
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.7e-35 Score=315.77 Aligned_cols=226 Identities=25% Similarity=0.279 Sum_probs=187.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC---cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG---AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~---~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.+.|...+.||+|+||.||++ ++.||||++...... ..+.+.+|++++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 356889999999999999974 689999999765332 235788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+. |++.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-- 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-- 206 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC--
Confidence 99997 5888888655556899999999999999999999 89999999999999999999999999999986532
Q ss_pred ccccccccccCcccccccccc---cCccchHHHHHHHhhhhhhhhccccccchhh------------------hhhhccc
Q 040702 663 QSLTQTQTLATIGYMAPDEIF---SGEMRLKCWVNDSLLISVMIVVDANLLIREE------------------KHLMTKE 721 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~------------------~~~~~~~ 721 (797)
.....||+.|+|||.+. .+.++.++|+|++|+..++.+....++.... ......+
T Consensus 207 ----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (348)
T 1u5q_A 207 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYF 282 (348)
T ss_dssp ----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHH
T ss_pred ----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHH
Confidence 23457999999999885 5678999999999999866555444322111 1122346
Q ss_pred ccchhccccCCCCCCCChHHHHHhH
Q 040702 722 QPMVRMGTDLSLGQFPASYSISKYL 746 (797)
Q Consensus 722 ~~l~~~cl~~dp~~RPs~~~i~~~l 746 (797)
.++++.|++.||++||++.++++.-
T Consensus 283 ~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 283 RNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred HHHHHHHcccChhhCcCHHHHhhCh
Confidence 6899999999999999999988643
No 191
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.8e-34 Score=322.18 Aligned_cols=236 Identities=18% Similarity=0.217 Sum_probs=196.2
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccC-CceeEeeeeeecCCeEEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRH-RNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H-pniv~l~~~~~~~~~~~lv~e 584 (797)
.++|...+.||+|+||.||++ ++.||||++..... .+++..|+++++.++| ++|+.+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 368999999999999999985 68999998875543 3678999999999986 666677777788889999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE---cCCCcEEEEeecCCccCCcc
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll---~~~~~~kl~DFGla~~~~~~ 661 (797)
|+ +++|.+++......+++..++.|+.||+.||+||| +++|+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 89999999876667999999999999999999999 8999999999999999 68899999999999876443
Q ss_pred Ccc-----ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh----------------------
Q 040702 662 DQS-----LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE---------------------- 714 (797)
Q Consensus 662 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~---------------------- 714 (797)
... .......||+.|+|||.+.+..++.++|||++|++.++.+.+..++....
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA 239 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH
Confidence 221 12235679999999999999999999999999999866665544432210
Q ss_pred --hhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 715 --KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 715 --~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
......+.+++..|++.||++||++.++.+.++.+...
T Consensus 240 l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 240 LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 12234677889999999999999999999999887654
No 192
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-35 Score=315.42 Aligned_cols=232 Identities=24% Similarity=0.307 Sum_probs=183.7
Q ss_pred HHHhcCCCccccccccCCcceeec-----ceEEEEEEEEeccC-----CcchhHHHHHHHhhhccCCceeEeeeeeecCC
Q 040702 508 FQATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-----GAFKSFDIECGMMKRIRHRNLIKIISSCSNDD 577 (797)
Q Consensus 508 ~~~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~ 577 (797)
....++|...+.||+|+||.||++ ++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 344678999999999999999985 68899999875422 12357889999999999999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 578 FKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 578 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
..++||||+++ +|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 99999999986 899998876666888999999999999999999 99999999999999999999999999999987
Q ss_pred CCccCccccccccccCcccccccccccC-ccchHHHHHHHhhhhhhhhccccccchhh----------------------
Q 040702 658 LLEEDQSLTQTQTLATIGYMAPDEIFSG-EMRLKCWVNDSLLISVMIVVDANLLIREE---------------------- 714 (797)
Q Consensus 658 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~s~~~~~~~~~~~~~~~~~~~---------------------- 714 (797)
..... .......||+.|+|||.+.+. .++.++|+|++|+..+..+.+..++....
T Consensus 162 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 162 FGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSS
T ss_pred ccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhh
Confidence 64322 223456799999999998764 48999999999998865554433322111
Q ss_pred ----------------------hhhhcccccchhccccCCCCCCCChHHHHHh
Q 040702 715 ----------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 715 ----------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
......+.++++.|+..||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 1112345679999999999999999998864
No 193
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.1e-35 Score=320.22 Aligned_cols=230 Identities=19% Similarity=0.283 Sum_probs=177.2
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccC--CcchhHHHHHHHhhhcc-CCceeEeeeeeecCC--eE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIR-HRNLIKIISSCSNDD--FK 579 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~--~~ 579 (797)
..++|+..+.||+|+||.||++ ++.||||++..... ...+.+.+|+.+++++. ||||+++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999985 68999999865422 23456789999999997 999999999997554 68
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
|+||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+...
T Consensus 87 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999997 5999998775 4889999999999999999999 9999999999999999999999999999998653
Q ss_pred ccC-------------------ccccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhhh----
Q 040702 660 EED-------------------QSLTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREEK---- 715 (797)
Q Consensus 660 ~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~---- 715 (797)
... ........+||++|+|||.+.+ ..++.++|+||+|++.++.+.+..++.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 211 1112344689999999999886 6789999999999998666655443321100
Q ss_pred -----------------------------------------------------------hhhcccccchhccccCCCCCC
Q 040702 716 -----------------------------------------------------------HLMTKEQPMVRMGTDLSLGQF 736 (797)
Q Consensus 716 -----------------------------------------------------------~~~~~~~~l~~~cl~~dp~~R 736 (797)
.......++++.|+..||++|
T Consensus 241 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 122346689999999999999
Q ss_pred CChHHHHHh
Q 040702 737 PASYSISKY 745 (797)
Q Consensus 737 Ps~~~i~~~ 745 (797)
||+.|+++.
T Consensus 321 ~t~~e~l~H 329 (388)
T 3oz6_A 321 ISANDALKH 329 (388)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhCC
Confidence 999888763
No 194
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=315.00 Aligned_cols=232 Identities=13% Similarity=0.137 Sum_probs=192.4
Q ss_pred cCCCccccccccCCcceeec-------------ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeE----------
Q 040702 512 NRFSENNLIGRGGFGPVYKD-------------GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIK---------- 568 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-------------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~---------- 568 (797)
++|...+.||+|+||.||++ ++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 68999999999999999975 578999998743 57889999999999999988
Q ss_pred -----eeeeeec-CCeEEEEEEccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE
Q 040702 569 -----IISSCSN-DDFKALVLEYMPLGSLEKCLYSG-NYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 641 (797)
Q Consensus 569 -----l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll 641 (797)
+++++.. ++..|+||||+ +|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEE
Confidence 5666665 67899999999 99999999875 236899999999999999999999 8999999999999999
Q ss_pred cCCC--cEEEEeecCCccCCccCccc-----cccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh
Q 040702 642 DDNM--VAHLSDFGMAKPLLEEDQSL-----TQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE 714 (797)
Q Consensus 642 ~~~~--~~kl~DFGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~ 714 (797)
+.++ .+||+|||+++......... ......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 89999999998765432211 1234579999999999998899999999999999866655544433321
Q ss_pred --h-------------------------hhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 715 --K-------------------------HLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 715 --~-------------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
. .....+.++++.|++.||++||++.++++.|+.+.+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 273 PNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp TCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 0 1134567889999999999999999999999987655
No 195
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.7e-34 Score=303.36 Aligned_cols=233 Identities=23% Similarity=0.362 Sum_probs=192.4
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeec---------
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSN--------- 575 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~--------- 575 (797)
..++|+..+.||+|+||.||++ ++.||||+++... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3467999999999999999985 6899999997543 567899999999999999999998854
Q ss_pred -------CCeEEEEEEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcE
Q 040702 576 -------DDFKALVLEYMPLGSLEKCLYSGN-YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVA 647 (797)
Q Consensus 576 -------~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~ 647 (797)
....++||||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCE
Confidence 345899999999999999997542 35899999999999999999999 8999999999999999999999
Q ss_pred EEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh------------h
Q 040702 648 HLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE------------K 715 (797)
Q Consensus 648 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~------------~ 715 (797)
||+|||+++...... ......||+.|+|||.+.+..++.++|+|++|+..+..+....+..... .
T Consensus 162 kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISD 238 (284)
T ss_dssp EECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCT
T ss_pred EECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcccccc
Confidence 999999998764332 2234579999999999998899999999999998755554332221111 1
Q ss_pred hhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 716 HLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 716 ~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
.....+.++++.|++.||.+||++.|+++.++.++.-
T Consensus 239 ~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 239 IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 1223456889999999999999999999998877544
No 196
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.3e-34 Score=304.34 Aligned_cols=228 Identities=19% Similarity=0.333 Sum_probs=191.2
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
.++|+..+.||+|+||.||++ ++.||+|++...... ..+.+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 478999999999999999985 689999999865432 3467889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCc---EEEEeecCCccCCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV---AHLSDFGMAKPLLE 660 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~---~kl~DFGla~~~~~ 660 (797)
||+++|+|.+.+.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999988887654 4899999999999999999999 899999999999999986655 99999999976543
Q ss_pred cCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhcc
Q 040702 661 EDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMTK 720 (797)
Q Consensus 661 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~~ 720 (797)
.. ......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.... ......
T Consensus 161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T 3kk8_A 161 SE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 237 (284)
T ss_dssp SC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHH
T ss_pred Cc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHH
Confidence 22 2244679999999999999999999999999998865555443321111 122345
Q ss_pred cccchhccccCCCCCCCChHHHHHh
Q 040702 721 EQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 721 ~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
+.++++.|++.||++||++.|+++.
T Consensus 238 ~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 238 AKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHHcccChhhCCCHHHHhcC
Confidence 6789999999999999999999874
No 197
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.9e-34 Score=310.04 Aligned_cols=220 Identities=16% Similarity=0.239 Sum_probs=182.6
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhcc-CCceeEeeeeeec--CCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIR-HRNLIKIISSCSN--DDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~--~~~~~lv 582 (797)
.++|+..+.||+|+||.||++ ++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 368999999999999999985 589999998633 3477899999999997 9999999999987 5678999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC-cEEEEeecCCccCCcc
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM-VAHLSDFGMAKPLLEE 661 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~-~~kl~DFGla~~~~~~ 661 (797)
|||+++++|.+++.. +++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+|+.....
T Consensus 112 ~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 999999999998853 788899999999999999999 99999999999999999776 8999999999865433
Q ss_pred CccccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccch--h-------------------------
Q 040702 662 DQSLTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIR--E------------------------- 713 (797)
Q Consensus 662 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~--~------------------------- 713 (797)
. ......||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..++.. .
T Consensus 185 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 185 Q---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp C---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred C---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 2 2344579999999999877 6689999999999988665554433210 0
Q ss_pred ---------------------------hhhhhcccccchhccccCCCCCCCChHHHH
Q 040702 714 ---------------------------EKHLMTKEQPMVRMGTDLSLGQFPASYSIS 743 (797)
Q Consensus 714 ---------------------------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~ 743 (797)
.......+.++++.|++.||++|||+.|++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l 318 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 318 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 000234566799999999999999987775
No 198
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.6e-35 Score=303.83 Aligned_cols=226 Identities=21% Similarity=0.285 Sum_probs=168.3
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
++|+..+.||+|+||.||++ ++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 68999999999999999975 6899999997542 223467889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
||+ ++++.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 93 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc-
Confidence 999 668888887654 4899999999999999999999 8999999999999999999999999999998654322
Q ss_pred cccccccccCcccccccccccCcc-chHHHHHHHhhhhhhhhccccccchhh----------------hhhhcccccchh
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEM-RLKCWVNDSLLISVMIVVDANLLIREE----------------KHLMTKEQPMVR 726 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~ 726 (797)
......||+.|+|||.+.+..+ +.++|+|++|+..+..+....++.... ......+.++++
T Consensus 167 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 244 (275)
T 2eue_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIK 244 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred --cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHH
Confidence 2234579999999999987765 689999999998866555444432211 112345678999
Q ss_pred ccccCCCCCCCChHHHHHh
Q 040702 727 MGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 727 ~cl~~dp~~RPs~~~i~~~ 745 (797)
.|++.||.+||++.|+++.
T Consensus 245 ~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 245 RMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHSCSSGGGSCCHHHHTTC
T ss_pred HHhhcCHhHCCCHHHHhhC
Confidence 9999999999999888753
No 199
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.6e-35 Score=320.61 Aligned_cols=234 Identities=21% Similarity=0.234 Sum_probs=192.7
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc-CCcchhHHHHHHHhhhccCCceeEeeeeeecCC--eEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY-GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDD--FKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~--~~~lv 582 (797)
.++|...+.||+|+||.||++ ++.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 367999999999999999985 6899999997543 234567889999999999999999999998765 78999
Q ss_pred EEccCCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE----cCCCcEEEEeecCCc
Q 040702 583 LEYMPLGSLEKCLYSGNY--ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL----DDNMVAHLSDFGMAK 656 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll----~~~~~~kl~DFGla~ 656 (797)
|||+++|+|.+++..... .+++..++.++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 999999999999976432 3899999999999999999999 9999999999999999 778889999999998
Q ss_pred cCCccCccccccccccCccccccccccc--------CccchHHHHHHHhhhhhhhhccccccchhh--------------
Q 040702 657 PLLEEDQSLTQTQTLATIGYMAPDEIFS--------GEMRLKCWVNDSLLISVMIVVDANLLIREE-------------- 714 (797)
Q Consensus 657 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------- 714 (797)
...... ......||+.|+|||.+.. ..++.++|+|++|+..++.+.+..++....
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp ECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred EccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 664332 2234679999999998865 578899999999999866665544432110
Q ss_pred -------------------------------hhhhcccccchhccccCCCCCCCChHHHHHhHHHHH
Q 040702 715 -------------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIR 750 (797)
Q Consensus 715 -------------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~ 750 (797)
......+.++++.|++.||++||++.++.+.++.+.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence 122234567889999999999999999988777664
No 200
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.5e-34 Score=318.60 Aligned_cols=226 Identities=19% Similarity=0.241 Sum_probs=179.0
Q ss_pred hcCCCcc-ccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhh-ccCCceeEeeeeeec----CCeE
Q 040702 511 TNRFSEN-NLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKR-IRHRNLIKIISSCSN----DDFK 579 (797)
Q Consensus 511 ~~~f~~~-~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~-l~Hpniv~l~~~~~~----~~~~ 579 (797)
.++|... +.||+|+||.||++ ++.||||+++. ...+.+|+.++.+ .+||||+++++++.. .+..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3567665 68999999999974 68899999863 2567789988755 489999999999875 5578
Q ss_pred EEEEEccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC---CCcEEEEeecCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMA 655 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~---~~~~kl~DFGla 655 (797)
|+||||+++|+|.+++..... .+++..+..++.||+.||+||| +.+|+||||||+|||++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 999999999999999987542 5899999999999999999999 899999999999999997 789999999999
Q ss_pred ccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh---------------------
Q 040702 656 KPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------- 714 (797)
Q Consensus 656 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------- 714 (797)
+...... .....+||+.|+|||.+.++.++.++|+|++|++.+..+.+..++....
T Consensus 212 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~ 288 (400)
T 1nxk_A 212 KETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 288 (400)
T ss_dssp EECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCT
T ss_pred cccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCC
Confidence 8653222 2345679999999999999999999999999999866655444332110
Q ss_pred ---hhhhcccccchhccccCCCCCCCChHHHHHhHH
Q 040702 715 ---KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLV 747 (797)
Q Consensus 715 ---~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~ 747 (797)
......+.++++.|+..||++||++.|+++.-.
T Consensus 289 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 289 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 122345678999999999999999999988543
No 201
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.5e-35 Score=314.52 Aligned_cols=241 Identities=20% Similarity=0.243 Sum_probs=192.8
Q ss_pred hcCCCccccccccCCcceeecc----------eEEEEEEEEecc-CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKDG----------MEVAIKVFNLQY-GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~~----------~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 579 (797)
.++|...+.||+|+||.||++. ..||||++.... .....++.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 4789999999999999999853 479999986442 22346788999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC---CCcEEEE
Q 040702 580 ALVLEYMPLGSLEKCLYSGN------YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLS 650 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~---~~~~kl~ 650 (797)
|+||||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998653 24889999999999999999999 899999999999999984 4469999
Q ss_pred eecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchhh---------------
Q 040702 651 DFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIREE--------------- 714 (797)
Q Consensus 651 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~~--------------- 714 (797)
|||+++...............||+.|+|||.+.++.++.++|+|++|+..+..+. +..++....
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~ 265 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 265 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCC
Confidence 9999975433322223344568999999999999999999999999999866553 333222111
Q ss_pred --hhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHHhc
Q 040702 715 --KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRELER 754 (797)
Q Consensus 715 --~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~ 754 (797)
......+.++++.|++.||.+||++.++++.++.+...+.
T Consensus 266 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 266 PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 1122356689999999999999999999999988866543
No 202
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-34 Score=314.11 Aligned_cols=235 Identities=22% Similarity=0.295 Sum_probs=186.9
Q ss_pred HHHHhcCCCccccccccCCcceeec-----ceEEEEEEEEecc-----CCcchhHHHHHHHhhhccCCceeEeeeeeecC
Q 040702 507 LFQATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY-----GGAFKSFDIECGMMKRIRHRNLIKIISSCSND 576 (797)
Q Consensus 507 l~~~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~ 576 (797)
+....++|...+.||+|+||.||++ +..||||++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3456788999999999999999975 5789999997652 23456889999999999999999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHhcC---------------------------------------CCCCCHHHHHHHHHHHHHH
Q 040702 577 DFKALVLEYMPLGSLEKCLYSG---------------------------------------NYILDIFQGLNIMIDVASA 617 (797)
Q Consensus 577 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~l~~~~~~~i~~qi~~a 617 (797)
+..++||||+++|+|.+++... ...+++..++.++.|+++|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999998521 1123567788999999999
Q ss_pred HHHHHccCCCCeEEcCCCCCceEEcCCC--cEEEEeecCCccCCccCc--cccccccccCccccccccccc--CccchHH
Q 040702 618 LEYLHFGYSVPIIHCDLKPSNVLLDDNM--VAHLSDFGMAKPLLEEDQ--SLTQTQTLATIGYMAPDEIFS--GEMRLKC 691 (797)
Q Consensus 618 l~yLH~~~~~~ivHrDlkp~NIll~~~~--~~kl~DFGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~~~ 691 (797)
|+||| +.+|+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999 89999999999999998766 899999999986533211 112345679999999999865 6788999
Q ss_pred HHHHHhhhhhhhhccccccchhh--------------------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 692 WVNDSLLISVMIVVDANLLIREE--------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 692 dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
|+|++|+..+..+.+..++.... ......+.++++.|++.||.+||++.++++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 99999998866555444432111 112345678999999999999999988865
No 203
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-35 Score=315.05 Aligned_cols=235 Identities=23% Similarity=0.283 Sum_probs=174.9
Q ss_pred cCCCccccccccCCcceeec---ceEEEEEEEEeccCCcchhHHHHHHHhhh--ccCCceeEeeeeeecCC----eEEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGGAFKSFDIECGMMKR--IRHRNLIKIISSCSNDD----FKALV 582 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~Hpniv~l~~~~~~~~----~~~lv 582 (797)
++|...+.||+|+||.||++ ++.||||++... ....+.+|.+++.. ++||||+++++++...+ ..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEcCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 68999999999999999986 688999998643 34567788888887 78999999999998776 78999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHcc-----CCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFG-----YSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~-----~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
|||+++|+|.+++.... +++..+..++.|++.|++|||.. ++++|+||||||+||+++.++.+||+|||+++.
T Consensus 80 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~ 157 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp EECCTTCCHHHHHHHCC--BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CC
T ss_pred EeccCCCCHHHHHhccC--cchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCccee
Confidence 99999999999997653 77888999999999999999932 267899999999999999999999999999976
Q ss_pred CCccCccc--cccccccCcccccccccccC------ccchHHHHHHHhhhhhhhhccc----------cccch-------
Q 040702 658 LLEEDQSL--TQTQTLATIGYMAPDEIFSG------EMRLKCWVNDSLLISVMIVVDA----------NLLIR------- 712 (797)
Q Consensus 658 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~dv~s~~~~~~~~~~~~----------~~~~~------- 712 (797)
........ ......||+.|+|||.+.+. .++.++|+|++|+..++.+... .++..
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3gxj_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCC
T ss_pred ccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCcc
Confidence 53322211 12344799999999998766 5568999999999875555431 11100
Q ss_pred ----------------hhh-----hhhcccccchhccccCCCCCCCChHHHHHhHHHHHH
Q 040702 713 ----------------EEK-----HLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIRE 751 (797)
Q Consensus 713 ----------------~~~-----~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~ 751 (797)
.+. .....+.++++.||+.||++||++.++++.|+.+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred HHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 000 112246779999999999999999999998877643
No 204
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.3e-34 Score=318.19 Aligned_cols=228 Identities=20% Similarity=0.249 Sum_probs=183.7
Q ss_pred cCCCccccccccCCcceeec----ceEEEEEEEEeccCC--cchhHHHHHHHhhhcc--CCceeEeeeeeecCCeEEEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIR--HRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~--Hpniv~l~~~~~~~~~~~lv~ 583 (797)
++|...+.||+|+||.||++ ++.||||++...... ..+.+.+|+.++++++ ||||+++++++..++..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 46999999999999999985 688999999865432 3467899999999996 599999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
| +.+++|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++ ++.+||+|||+++.......
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56789999998765 4888899999999999999999 99999999999999996 57999999999987654333
Q ss_pred cccccccccCccccccccccc-----------CccchHHHHHHHhhhhhhhhccccccchhh------------------
Q 040702 664 SLTQTQTLATIGYMAPDEIFS-----------GEMRLKCWVNDSLLISVMIVVDANLLIREE------------------ 714 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~------------------ 714 (797)
.......+||+.|||||.+.+ ..++.++|||++|++.++.+.+..++....
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~ 289 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCC
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCC
Confidence 333455689999999998864 468999999999999866665544432210
Q ss_pred -hhhhcccccchhccccCCCCCCCChHHHHHh
Q 040702 715 -KHLMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 715 -~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
......+.++++.|+..||.+||++.|+++.
T Consensus 290 ~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 0112246788999999999999999999875
No 205
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=333.70 Aligned_cols=236 Identities=18% Similarity=0.222 Sum_probs=189.1
Q ss_pred CCCccc-cccccCCcceeec-------ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 513 RFSENN-LIGRGGFGPVYKD-------GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 513 ~f~~~~-~lg~G~~g~Vyk~-------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
++...+ .||+|+||.||++ +..||||+++.... ...+++.+|++++++++|||||+++++|.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 344444 7999999999975 35799999976532 345789999999999999999999999976 5689999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
||+++|+|.+++......+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.......
T Consensus 415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 999999999999876667999999999999999999999 89999999999999999999999999999987643322
Q ss_pred c-ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcccccc
Q 040702 664 S-LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQPM 724 (797)
Q Consensus 664 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~l 724 (797)
. .......+|+.|+|||.+..+.++.++|||++|+..++.+. +..++... +......+.++
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~l 571 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYAL 571 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHH
Confidence 1 12223446789999999999999999999999999866553 33332211 11233466788
Q ss_pred hhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 725 VRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 725 ~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
++.||+.||++||++.++++.|+.+...
T Consensus 572 i~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 572 MSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp HHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999887554
No 206
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=7.5e-35 Score=305.33 Aligned_cols=236 Identities=20% Similarity=0.285 Sum_probs=194.6
Q ss_pred hcCCCccccccccCCcceeec----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEcc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEYM 586 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~~ 586 (797)
.++|+..+.||+|+||.||++ +..||||.++... ...+.+.+|++++++++||||+++++++.. +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 468999999999999999985 5789999987543 235789999999999999999999999864 4589999999
Q ss_pred CCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCccc
Q 040702 587 PLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSL 665 (797)
Q Consensus 587 ~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~ 665 (797)
++++|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 165 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YT 165 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-EE
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-cc
Confidence 99999999875432 4899999999999999999999 9999999999999999999999999999998664322 12
Q ss_pred cccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-h----------------hhhhcccccchhc
Q 040702 666 TQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-E----------------KHLMTKEQPMVRM 727 (797)
Q Consensus 666 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-~----------------~~~~~~~~~l~~~ 727 (797)
......+|..|+|||.+..+.++.++|+|++|+..+..+. +..++... . ......+.++++.
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 245 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL 245 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHH
Confidence 2234567889999999998999999999999999866554 33322211 1 1123356789999
Q ss_pred cccCCCCCCCChHHHHHhHHHHHHH
Q 040702 728 GTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 728 cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
|++.||++||++.++++.++.+...
T Consensus 246 ~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 246 CWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhccChhhCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999887654
No 207
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.9e-34 Score=301.64 Aligned_cols=231 Identities=19% Similarity=0.243 Sum_probs=191.6
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
..++|+..+.||+|+||.||++ ++.||||+++.... ...+.+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3578999999999999999975 68999999986543 33567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+........
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp ECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 9999999999886544 4899999999999999999999 89999999999999999999999999999986543322
Q ss_pred cccccccccCcccccccccccCcc-chHHHHHHHhhhhhhhhccccccchhh-------------------hhhhccccc
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEM-RLKCWVNDSLLISVMIVVDANLLIREE-------------------KHLMTKEQP 723 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~ 723 (797)
........||+.|+|||.+.+..+ +.++|+|++|+..+..+.+..++.... ......+.+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHH
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHH
Confidence 223345679999999999987765 789999999998865554443322111 122345668
Q ss_pred chhccccCCCCCCCChHHHHH
Q 040702 724 MVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 724 l~~~cl~~dp~~RPs~~~i~~ 744 (797)
+++.|++.||.+||++.|+++
T Consensus 241 li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 241 LLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp HHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHCCCCchhCCCHHHHhc
Confidence 899999999999999888764
No 208
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=313.87 Aligned_cols=233 Identities=18% Similarity=0.168 Sum_probs=185.6
Q ss_pred cCCCccccccccCCcceeec--------ceEEEEEEEEeccCC-----------cchhHHHHHHHhhhccCCceeEeeee
Q 040702 512 NRFSENNLIGRGGFGPVYKD--------GMEVAIKVFNLQYGG-----------AFKSFDIECGMMKRIRHRNLIKIISS 572 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~--------~~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~Hpniv~l~~~ 572 (797)
++|...+.||+|+||.||++ +..||||++...... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 67999999999999999974 467999998765321 12346778888999999999999999
Q ss_pred eec----CCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC--c
Q 040702 573 CSN----DDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM--V 646 (797)
Q Consensus 573 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~--~ 646 (797)
+.. .+..|+||||+ +++|.+++...+ .+++..++.++.|++.||+||| +.+|+||||||+||+++.++ .
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCc
Confidence 987 67899999999 999999997655 5899999999999999999999 89999999999999999877 9
Q ss_pred EEEEeecCCccCCccCcc-----ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhhh------
Q 040702 647 AHLSDFGMAKPLLEEDQS-----LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREEK------ 715 (797)
Q Consensus 647 ~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~------ 715 (797)
+||+|||+|+.+...... .......||+.|+|||.+.+..++.++|+|++|+..++.+.+..++.....
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 999999999876433211 112456799999999999988899999999999998666655554422100
Q ss_pred ---------------------hhhcccccchhccccCCCCCCCChHHHHHhHHHH
Q 040702 716 ---------------------HLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYI 749 (797)
Q Consensus 716 ---------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i 749 (797)
.....+.++++.|+..||++||++.++++.|+.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 272 TAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 2223677899999999999999999999988653
No 209
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.7e-34 Score=308.41 Aligned_cols=235 Identities=24% Similarity=0.305 Sum_probs=191.3
Q ss_pred cCCCccccccccCCcceeec-----ce--EEEEEEEEecc-CCcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GM--EVAIKVFNLQY-GGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~--~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lv 582 (797)
++|...+.||+|+||.||++ +. .||||.++... ....+.+.+|+++++++ +||||+++++++.+.+..|+|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 68999999999999999985 33 45999987542 33457799999999999 899999999999999999999
Q ss_pred EEccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcE
Q 040702 583 LEYMPLGSLEKCLYSGN---------------YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVA 647 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~ 647 (797)
|||+++|+|.+++.... ..+++..++.++.|+++||+||| +++|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997654 25899999999999999999999 9999999999999999999999
Q ss_pred EEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-------------
Q 040702 648 HLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE------------- 713 (797)
Q Consensus 648 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~------------- 713 (797)
||+|||+++..... .......+|+.|+|||.+....++.++|+|++|+..+..+. +..++...
T Consensus 182 kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~ 258 (327)
T 1fvr_A 182 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 258 (327)
T ss_dssp EECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC
T ss_pred EEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCC
Confidence 99999999743221 12233457889999999988889999999999999866553 33332211
Q ss_pred ----hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 714 ----EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 714 ----~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
+......+.++++.|++.||.+||++.++++.++.+.+-
T Consensus 259 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 259 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 112234567899999999999999999999999887654
No 210
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.9e-35 Score=327.99 Aligned_cols=235 Identities=21% Similarity=0.293 Sum_probs=188.3
Q ss_pred HhcCCCccccccccCCcceeec----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
..++|...+.||+|+||.||++ +..||||+++... ...++|.+|++++++++||||+++++++.+ +..|+||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 4578899999999999999985 4789999987543 235789999999999999999999999876 678999999
Q ss_pred cCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcc
Q 040702 586 MPLGSLEKCLYSGN-YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQS 664 (797)
Q Consensus 586 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~ 664 (797)
+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++...... .
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~ 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-Y 335 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-e
Confidence 99999999997532 34899999999999999999999 9999999999999999999999999999998654322 2
Q ss_pred ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcccccchh
Q 040702 665 LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQPMVR 726 (797)
Q Consensus 665 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~l~~ 726 (797)
.......+|..|+|||.+..+.++.++|+|++|+..++.+. +..++... +......+.++++
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~ 415 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 415 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHH
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 22334557889999999999999999999999999866554 33322211 1122335678899
Q ss_pred ccccCCCCCCCChHHHHHhHHHHH
Q 040702 727 MGTDLSLGQFPASYSISKYLVYIR 750 (797)
Q Consensus 727 ~cl~~dp~~RPs~~~i~~~l~~i~ 750 (797)
.||+.||++||++.++.+.|+.+.
T Consensus 416 ~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 416 QCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred HHccCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999998887653
No 211
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1e-34 Score=325.75 Aligned_cols=224 Identities=22% Similarity=0.237 Sum_probs=179.5
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeeecC------C
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCSND------D 577 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~------~ 577 (797)
.++|+..+.||+|+||.||++ ++.||||++..... ...+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 478999999999999999975 68999999986532 2346788999999999999999999998654 3
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 578 FKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 578 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 57999999976 56666644 3889999999999999999999 89999999999999999999999999999986
Q ss_pred CCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhhh----------------------
Q 040702 658 LLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREEK---------------------- 715 (797)
Q Consensus 658 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~---------------------- 715 (797)
.... ......+||++|+|||.+.+..|+.++|+|++|++.++.+.+..++.+...
T Consensus 214 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 214 AGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp ---C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred cCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 5332 133457899999999999999999999999999998665544433322100
Q ss_pred ------------------------------------hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 ------------------------------------HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 ------------------------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.......++++.|+..||++|||+.|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00234568999999999999999999886
No 212
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-34 Score=302.90 Aligned_cols=227 Identities=22% Similarity=0.325 Sum_probs=183.8
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
.++|...+.||+|+||.||++ +..||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 368999999999999999974 68999999987643 345788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE---cCCCcEEEEeecCCccC
Q 040702 585 YMPLGSLEKCLYSG---NYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPL 658 (797)
Q Consensus 585 ~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll---~~~~~~kl~DFGla~~~ 658 (797)
|+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999988542 235899999999999999999999 9999999999999999 45678999999999865
Q ss_pred CccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhhh-------------------hhhc
Q 040702 659 LEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREEK-------------------HLMT 719 (797)
Q Consensus 659 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~-------------------~~~~ 719 (797)
.... ......||+.|+|||.+. +.++.++|+|++|+..+..+.+..++..... ....
T Consensus 178 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (285)
T 3is5_A 178 KSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTP 253 (285)
T ss_dssp ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCH
T ss_pred CCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCH
Confidence 4322 234467999999999874 6789999999999998665554443322111 1233
Q ss_pred ccccchhccccCCCCCCCChHHHHH
Q 040702 720 KEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 720 ~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.+.++++.|++.||++||++.|+++
T Consensus 254 ~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 254 QAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 5568899999999999999988874
No 213
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.5e-35 Score=317.76 Aligned_cols=202 Identities=26% Similarity=0.290 Sum_probs=170.3
Q ss_pred cCccCHHHHHHHhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhcc-----CCceeE
Q 040702 499 QRRFTYLELFQATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIR-----HRNLIK 568 (797)
Q Consensus 499 ~~~~~~~~l~~~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----Hpniv~ 568 (797)
...+++++-....++|...+.||+|+||.||++ ++.||||+++... ...+.+..|+.+++.++ ||||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 344555555556789999999999999999974 5889999986432 22456778999999986 999999
Q ss_pred eeeeeecCCeEEEEEEccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC----
Q 040702 569 IISSCSNDDFKALVLEYMPLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---- 643 (797)
Q Consensus 569 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~---- 643 (797)
+++++...+..|+||||+ +++|.+++..... .+++..+..++.||+.||+||| +++|+||||||+|||++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCC
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccc
Confidence 999999999999999999 8899999986543 5899999999999999999999 999999999999999975
Q ss_pred ---------------------CCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhh
Q 040702 644 ---------------------NMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVM 702 (797)
Q Consensus 644 ---------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~ 702 (797)
++.+||+|||+|+..... .....||+.|+|||.+.+..++.++|+|++|+..+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 789999999999854321 234679999999999999999999999999999866
Q ss_pred hhcccccc
Q 040702 703 IVVDANLL 710 (797)
Q Consensus 703 ~~~~~~~~ 710 (797)
.+.+..++
T Consensus 252 ll~g~~pf 259 (360)
T 3llt_A 252 LYTGSLLF 259 (360)
T ss_dssp HHHSSCSC
T ss_pred HHHCCCCC
Confidence 66554443
No 214
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=308.20 Aligned_cols=237 Identities=19% Similarity=0.165 Sum_probs=191.5
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeec----CCeEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSN----DDFKAL 581 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~----~~~~~l 581 (797)
.++|...+.||+|+||.||++ ++.||||++........+.+.+|+++++.++||||+++++++.. ....|+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 468999999999999999974 68999999977655556788999999999999999999999873 347899
Q ss_pred EEEccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccC
Q 040702 582 VLEYMPLGSLEKCLYS---GNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 658 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~ 658 (797)
||||+++|+|.+++.. ....+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999875 3346899999999999999999999 899999999999999999999999999998765
Q ss_pred CccCccc-------cccccccCcccccccccccCc---cchHHHHHHHhhhhhhhhccccccchhh--------------
Q 040702 659 LEEDQSL-------TQTQTLATIGYMAPDEIFSGE---MRLKCWVNDSLLISVMIVVDANLLIREE-------------- 714 (797)
Q Consensus 659 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------- 714 (797)
....... ......||+.|+|||.+.... ++.++|+|++|+..+..+....++....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 264 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL 264 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC-
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccC
Confidence 3211110 112345799999999887543 6899999999998866655544432211
Q ss_pred -----hhhhcccccchhccccCCCCCCCChHHHHHhHHHHH
Q 040702 715 -----KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIR 750 (797)
Q Consensus 715 -----~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~ 750 (797)
......+.++++.|++.||.+||++.++++.++.++
T Consensus 265 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 265 SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 112335678999999999999999999999887754
No 215
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-35 Score=317.45 Aligned_cols=229 Identities=20% Similarity=0.231 Sum_probs=184.8
Q ss_pred hcCCCccccccccCCcceee--------cceEEEEEEEEecc----CCcchhHHHHHHHhhhc-cCCceeEeeeeeecCC
Q 040702 511 TNRFSENNLIGRGGFGPVYK--------DGMEVAIKVFNLQY----GGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDD 577 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk--------~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 577 (797)
.++|...+.||+|+||.||+ .++.||||+++... ....+.+.+|+++++++ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999996 35889999986542 22346677899999999 5999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 578 FKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 578 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
..++||||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999997654 4899999999999999999999 89999999999999999999999999999986
Q ss_pred CCccCccccccccccCccccccccccc--CccchHHHHHHHhhhhhhhhccccccch--------------------hhh
Q 040702 658 LLEEDQSLTQTQTLATIGYMAPDEIFS--GEMRLKCWVNDSLLISVMIVVDANLLIR--------------------EEK 715 (797)
Q Consensus 658 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~dv~s~~~~~~~~~~~~~~~~~--------------------~~~ 715 (797)
...... ......+||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..++.. .+.
T Consensus 209 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (355)
T 1vzo_A 209 FVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 287 (355)
T ss_dssp CCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCT
T ss_pred cccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCc
Confidence 543222 22345679999999999885 3478999999999998666555443321 111
Q ss_pred hhhcccccchhccccCCCCCCC-----ChHHHHH
Q 040702 716 HLMTKEQPMVRMGTDLSLGQFP-----ASYSISK 744 (797)
Q Consensus 716 ~~~~~~~~l~~~cl~~dp~~RP-----s~~~i~~ 744 (797)
.....+.++++.|+..||.+|| ++.|+++
T Consensus 288 ~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 288 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 2223456788999999999999 5555544
No 216
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.9e-34 Score=310.17 Aligned_cols=228 Identities=23% Similarity=0.313 Sum_probs=183.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCc--chhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGA--FKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~--~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
.++|+..+.||+|+||.||++ ++.||||++....... .+.+.+|+.++++++||||+++++++.+.+..|+||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 468999999999999999974 6889999987654322 356788999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
||++++++.++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 104 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 9999999988776544 4899999999999999999999 89999999999999999999999999999986543221
Q ss_pred cccccccccCcccccccccccC-ccchHHHHHHHhhhhhhhhccccccchhhh---------------------------
Q 040702 664 SLTQTQTLATIGYMAPDEIFSG-EMRLKCWVNDSLLISVMIVVDANLLIREEK--------------------------- 715 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~--------------------------- 715 (797)
......||+.|+|||.+.+. .++.++|+|++|+..+..+.+..++.....
T Consensus 180 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 180 --VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred --ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 23446799999999998775 689999999999988665555443322110
Q ss_pred --------------------hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 --------------------HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 --------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.....+.++++.|++.||++||++.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 12334668899999999999999988775
No 217
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.5e-34 Score=310.37 Aligned_cols=230 Identities=19% Similarity=0.237 Sum_probs=185.7
Q ss_pred HHHhcCCCcc-ccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhcc-CCceeEeeeeeecCCe
Q 040702 508 FQATNRFSEN-NLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIR-HRNLIKIISSCSNDDF 578 (797)
Q Consensus 508 ~~~~~~f~~~-~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~ 578 (797)
....++|... +.||+|+||.||++ ++.||||+++..... ....+.+|+.+++++. ||||+++++++.+.+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3445677776 89999999999985 689999999865432 3467889999999995 6999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC---CCcEEEEeecC
Q 040702 579 KALVLEYMPLGSLEKCLYSG-NYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGM 654 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~---~~~~kl~DFGl 654 (797)
.++||||+++|+|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 99999999999999988653 236899999999999999999999 899999999999999987 78999999999
Q ss_pred CccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------
Q 040702 655 AKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE-------------------- 714 (797)
Q Consensus 655 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------------- 714 (797)
++...... ......||+.|+|||.+....++.++|+|++|+..+..+....++....
T Consensus 181 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 257 (327)
T 3lm5_A 181 SRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETF 257 (327)
T ss_dssp CEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTT
T ss_pred ccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhh
Confidence 98654322 2234679999999999999999999999999998866555444332111
Q ss_pred hhhhcccccchhccccCCCCCCCChHHHH
Q 040702 715 KHLMTKEQPMVRMGTDLSLGQFPASYSIS 743 (797)
Q Consensus 715 ~~~~~~~~~l~~~cl~~dp~~RPs~~~i~ 743 (797)
......+.++++.|++.||++||++.+++
T Consensus 258 ~~~~~~~~~li~~~L~~dP~~Rpt~~~ll 286 (327)
T 3lm5_A 258 SSVSQLATDFIQSLLVKNPEKRPTAEICL 286 (327)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred cccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 11223467789999999999999987775
No 218
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.8e-34 Score=309.74 Aligned_cols=230 Identities=20% Similarity=0.267 Sum_probs=185.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeeec--------
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCSN-------- 575 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~-------- 575 (797)
.++|+..+.||+|+||.||++ ++.||||++..... .....+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 468999999999999999975 68999999865532 234578899999999999999999999877
Q ss_pred CCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCC
Q 040702 576 DDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMA 655 (797)
Q Consensus 576 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla 655 (797)
.+..|+||||+++ ++.+.+......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3468999999975 888888776666999999999999999999999 999999999999999999999999999999
Q ss_pred ccCCccC--ccccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhhhh----------------
Q 040702 656 KPLLEED--QSLTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREEKH---------------- 716 (797)
Q Consensus 656 ~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~~---------------- 716 (797)
+...... .........||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..++......
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 8654222 1122345678999999998876 45799999999999886655544433221110
Q ss_pred --------------------------------hhcccccchhccccCCCCCCCChHHHHH
Q 040702 717 --------------------------------LMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 717 --------------------------------~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
....+.++++.|++.||++||++.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0123557899999999999999988775
No 219
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.3e-35 Score=306.30 Aligned_cols=232 Identities=25% Similarity=0.301 Sum_probs=186.7
Q ss_pred hcCCCccccccccCCcceeec---ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecC-CeEEEEEEcc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSND-DFKALVLEYM 586 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~-~~~~lv~e~~ 586 (797)
.++|+..+.||+|+||.||++ ++.||||+++... ..+.+.+|++++++++||||+++++++... +..++||||+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 478999999999999999985 6899999986443 457899999999999999999999997654 4789999999
Q ss_pred CCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCccc
Q 040702 587 PLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSL 665 (797)
Q Consensus 587 ~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~ 665 (797)
++|+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---- 170 (278)
T 1byg_A 98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 170 (278)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc----
Confidence 99999999976432 3788899999999999999999 899999999999999999999999999999854322
Q ss_pred cccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcccccchhc
Q 040702 666 TQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQPMVRM 727 (797)
Q Consensus 666 ~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~l~~~ 727 (797)
.....+++.|+|||.+.+..++.++|+|++|+..+..+. +..++... +......+.++++.
T Consensus 171 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 249 (278)
T 1byg_A 171 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKN 249 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHH
T ss_pred -ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHH
Confidence 123457889999999998899999999999998865553 33322211 11223456788999
Q ss_pred cccCCCCCCCChHHHHHhHHHHHHH
Q 040702 728 GTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 728 cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
|++.||++||++.++++.|+.++..
T Consensus 250 ~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 250 CWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhcCChhhCCCHHHHHHHHHHHHhh
Confidence 9999999999999999999998765
No 220
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5.5e-34 Score=299.38 Aligned_cols=227 Identities=22% Similarity=0.265 Sum_probs=187.9
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEeccCC------cchhHHHHHHHhhhccCCceeEeeeeeecCCeEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG------AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKA 580 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 580 (797)
++|...+.||+|+||.||++ ++.||||+++..... ..+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 57999999999999999985 689999999865321 2467899999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC----cEEEEeecCCc
Q 040702 581 LVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM----VAHLSDFGMAK 656 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~----~~kl~DFGla~ 656 (797)
+||||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++
T Consensus 85 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999997644 4899999999999999999999 89999999999999998877 89999999998
Q ss_pred cCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh--------------------hhh
Q 040702 657 PLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE--------------------EKH 716 (797)
Q Consensus 657 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~--------------------~~~ 716 (797)
...... ......||+.|+|||.+....++.++|+|++|+..+..+....++... ...
T Consensus 161 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T 3bhy_A 161 KIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN 237 (283)
T ss_dssp ECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred eccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhccc
Confidence 654322 223457999999999998889999999999999875555443332211 112
Q ss_pred hhcccccchhccccCCCCCCCChHHHHHh
Q 040702 717 LMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 717 ~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
....+.++++.|+..||++||++.++++.
T Consensus 238 ~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 238 TSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred CCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 23356788999999999999999999874
No 221
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.7e-34 Score=304.07 Aligned_cols=255 Identities=31% Similarity=0.494 Sum_probs=224.1
Q ss_pred CCCcEEEccCCCCCC--CCChhhhccccCCcEEEccC-CcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCC
Q 040702 179 KYLEYFSFSNNPLGG--ILPRAIGNLSQSMEDFWMDN-CNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAA 255 (797)
Q Consensus 179 ~~L~~L~Ls~N~l~~--~~~~~~~~l~~~L~~L~L~~-n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~ 255 (797)
.+++.|+|++|.+.+ .+|..|.+++ +|+.|++++ |.+.+.+|..|+++++| ++|+|++|.+++..|..|..+++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~-~L~~L~L~~~n~l~~~~p~~l~~l~~L--~~L~Ls~n~l~~~~p~~~~~l~~ 126 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLP-YLNFLYIGGINNLVGPIPPAIAKLTQL--HYLYITHTNVSGAIPDFLSQIKT 126 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCT-TCSEEEEEEETTEESCCCGGGGGCTTC--SEEEEEEECCEEECCGGGGGCTT
T ss_pred ceEEEEECCCCCccCCcccChhHhCCC-CCCeeeCCCCCcccccCChhHhcCCCC--CEEECcCCeeCCcCCHHHhCCCC
Confidence 457777777777777 6677777776 778888874 77777778888888877 88888888888788888888888
Q ss_pred CcEEEccCCcCcccCCCCccCCccccccccCCCCCC-CCCCCCCCCC-cccEEEccCCcCCCCCCccccccccccEEecc
Q 040702 256 LFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLT-SIPSTLWNLK-DILHLNLSSNFFTGPLPLKIGNLNVLVQLDLS 333 (797)
Q Consensus 256 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 333 (797)
|++|+|++|++++..|..+..+++|++|++++|.++ .+|..+..++ +|+.|++++|.+++..|..|..+. |+.|+++
T Consensus 127 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls 205 (313)
T 1ogq_A 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLS 205 (313)
T ss_dssp CCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECC
T ss_pred CCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECc
Confidence 888888888888888888888888999999999885 7888888887 899999999999988899999887 9999999
Q ss_pred CcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCcccC
Q 040702 334 MNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGEI 413 (797)
Q Consensus 334 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 413 (797)
+|.+++..|..|..+++|+.|+|++|++++..|. +..+++|++|+|++|++++.+|..+..+++|+.|++++|++++.+
T Consensus 206 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~i 284 (313)
T 1ogq_A 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284 (313)
T ss_dssp SSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred CCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccC
Confidence 9999999999999999999999999999976665 888999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCCccccCCCC
Q 040702 414 PREGPFRNLSAESFKGNELLCGMPN 438 (797)
Q Consensus 414 p~~~~~~~l~~~~~~~n~~~c~~~~ 438 (797)
|....+..+..+++.+|+++|+.|.
T Consensus 285 p~~~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 285 PQGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp CCSTTGGGSCGGGTCSSSEEESTTS
T ss_pred CCCccccccChHHhcCCCCccCCCC
Confidence 9988899999999999999999874
No 222
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.4e-34 Score=303.95 Aligned_cols=230 Identities=18% Similarity=0.249 Sum_probs=192.6
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC---CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG---GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|...+.||+|+||.||++ ++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 468999999999999999984 57899999976532 2346788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+++++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999999887654 4899999999999999999999 8999999999999999999999999999998654222
Q ss_pred ccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh----------------hhhhhcccccchh
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE----------------EKHLMTKEQPMVR 726 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~ 726 (797)
. ......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++... +......+.++++
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 247 (294)
T 2rku_A 170 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 247 (294)
T ss_dssp C--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHH
T ss_pred c--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccccCHHHHHHHH
Confidence 1 234467999999999998888999999999999886555444433221 1122335678899
Q ss_pred ccccCCCCCCCChHHHHHhH
Q 040702 727 MGTDLSLGQFPASYSISKYL 746 (797)
Q Consensus 727 ~cl~~dp~~RPs~~~i~~~l 746 (797)
.|++.||++||++.|+++.-
T Consensus 248 ~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 248 KMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp HHTCSSGGGSCCGGGGGGSH
T ss_pred HHcccChhhCcCHHHHhhCh
Confidence 99999999999999998753
No 223
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.5e-34 Score=301.45 Aligned_cols=226 Identities=20% Similarity=0.259 Sum_probs=185.7
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccC--CcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG--GAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~l 581 (797)
..++|+..+.||+|+||.||++ ++.||||+++.... ....++.+|+..+..+ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3578999999999999999984 68999999986532 2346788899999999 89999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCC--------------
Q 040702 582 VLEYMPLGSLEKCLYSGN---YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN-------------- 644 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~-------------- 644 (797)
||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999997542 35899999999999999999999 8999999999999999844
Q ss_pred -----CcEEEEeecCCccCCccCccccccccccCcccccccccccC-ccchHHHHHHHhhhhhhhhccccccch------
Q 040702 645 -----MVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSG-EMRLKCWVNDSLLISVMIVVDANLLIR------ 712 (797)
Q Consensus 645 -----~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~s~~~~~~~~~~~~~~~~~------ 712 (797)
..+||+|||.++..... ....||+.|+|||.+.+. .++.++|+|++|+..+..+....+...
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~ 239 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE 239 (289)
T ss_dssp ----CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHH
T ss_pred ccCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHH
Confidence 47999999999865332 224599999999998766 567899999999988655544433211
Q ss_pred --------hhhhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 713 --------EEKHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 713 --------~~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.+......+.++++.|++.||++||++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 240 IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11123346778999999999999999988865
No 224
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.5e-34 Score=304.26 Aligned_cols=227 Identities=19% Similarity=0.254 Sum_probs=188.5
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
.++|...+.||+|+||.||++ ++.||||+++.......+.+.+|+.++++++||||+++++++.+.+..|+||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 468999999999999999974 689999999866544456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE---cCCCcEEEEeecCCccCCccC
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll---~~~~~~kl~DFGla~~~~~~~ 662 (797)
+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 99999999987654 4899999999999999999999 8999999999999999 78889999999999754321
Q ss_pred ccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh--------------------hhhhhcccc
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE--------------------EKHLMTKEQ 722 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~ 722 (797)
......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++... .......+.
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (304)
T 2jam_A 163 ---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAK 239 (304)
T ss_dssp ---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHH
T ss_pred ---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHH
Confidence 223456999999999999999999999999999876555444332211 112234567
Q ss_pred cchhccccCCCCCCCChHHHHHh
Q 040702 723 PMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 723 ~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
++++.|+..||++||++.|+++.
T Consensus 240 ~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 240 DFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcCCChhHCcCHHHHhcC
Confidence 89999999999999999998874
No 225
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.5e-34 Score=304.20 Aligned_cols=228 Identities=22% Similarity=0.244 Sum_probs=187.4
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
..++|+..+.||+|+||.||++ ++.||||.+.... ..+.+.+|+.++++++||||+++++++...+..|+|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 3468999999999999999985 6899999997543 35789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcc
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQS 664 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~ 664 (797)
|+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-- 179 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-- 179 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--
Confidence 99999999999754456899999999999999999999 8999999999999999999999999999998653321
Q ss_pred ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh-------------------hhhhhcccccch
Q 040702 665 LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE-------------------EKHLMTKEQPMV 725 (797)
Q Consensus 665 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~l~ 725 (797)
.......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++... +......+.+++
T Consensus 180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 259 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFV 259 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHH
T ss_pred cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHH
Confidence 1234467999999999999889999999999999876555544333221 111234567899
Q ss_pred hccccCCCCCCCChHHHHH
Q 040702 726 RMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 726 ~~cl~~dp~~RPs~~~i~~ 744 (797)
+.|++.||.+||++.++++
T Consensus 260 ~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 260 KQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHTCSCTTTSCCHHHHTT
T ss_pred HHHccCChhhCcCHHHHHh
Confidence 9999999999999998876
No 226
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.9e-34 Score=305.50 Aligned_cols=234 Identities=19% Similarity=0.214 Sum_probs=185.2
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC---cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG---AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~---~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|...+.||+|+||.||++ ++.||||++...... ..+.+.+|+.++++++||||+++++++..++..|+|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999985 688999998755322 236788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999997654 4899999999999999999999 8999999999999999999999999999998654322
Q ss_pred ccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh-------------------hhhhccccc
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE-------------------KHLMTKEQP 723 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~ 723 (797)
........||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.... ......+.+
T Consensus 189 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 267 (309)
T 2h34_A 189 -LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDA 267 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHH
T ss_pred -cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHH
Confidence 122334579999999999998889999999999998866555544432211 122345678
Q ss_pred chhccccCCCCCCC-ChHHHHHhHHHH
Q 040702 724 MVRMGTDLSLGQFP-ASYSISKYLVYI 749 (797)
Q Consensus 724 l~~~cl~~dp~~RP-s~~~i~~~l~~i 749 (797)
+++.|++.||++|| ++.++++.++..
T Consensus 268 li~~~l~~dP~~Rp~s~~~l~~~l~~~ 294 (309)
T 2h34_A 268 VIARGMAKNPEDRYVTCGDLSAAAHAA 294 (309)
T ss_dssp HHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred HHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence 89999999999999 899999888765
No 227
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.3e-34 Score=300.37 Aligned_cols=227 Identities=21% Similarity=0.270 Sum_probs=191.8
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|...+.||+|+||.||++ +..||||++.... ....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 368999999999999999985 5789999997642 23346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+++|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 99999999999997654 4899999999999999999999 999999999999999999999999999999754322
Q ss_pred ccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh----------------hhhhhcccccchh
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE----------------EKHLMTKEQPMVR 726 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~ 726 (797)
......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++... +......+.++++
T Consensus 168 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 244 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLIS 244 (284)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHH
T ss_pred ---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHHHH
Confidence 223467999999999999888999999999999886655544433221 1122345678999
Q ss_pred ccccCCCCCCCChHHHHHh
Q 040702 727 MGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 727 ~cl~~dp~~RPs~~~i~~~ 745 (797)
.|++.||.+||++.++++.
T Consensus 245 ~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 245 KLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp HHSCSSGGGSCCHHHHHTC
T ss_pred HHhhcCHhhCCCHHHHhhC
Confidence 9999999999999998874
No 228
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.3e-34 Score=315.34 Aligned_cols=227 Identities=20% Similarity=0.237 Sum_probs=188.6
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
.++|...+.||+|+||.||++ +..||+|+++.... ...+.+.+|+.++++++||||+++++++..++..|+|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 367999999999999999984 68899999986532 234678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~-~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
|+++|+|.+++.... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999997754 4899999999999999999999 75 8999999999999999999999999999754221
Q ss_pred cccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhhh----------------------------
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREEK---------------------------- 715 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~---------------------------- 715 (797)
......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++.....
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 22345799999999999999999999999999988665554433221100
Q ss_pred --------------------------------hhhcccccchhccccCCCCCCCChHHHHHh
Q 040702 716 --------------------------------HLMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 716 --------------------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
.....+.++++.|++.||++|||+.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 012346688999999999999999998863
No 229
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6e-35 Score=319.84 Aligned_cols=224 Identities=13% Similarity=0.110 Sum_probs=179.1
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHH---HHhhhccCCceeEee-------ee
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIEC---GMMKRIRHRNLIKII-------SS 572 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~---~~l~~l~Hpniv~l~-------~~ 572 (797)
.++|...+.||+|+||.||++ ++.||||++.... ....+.+.+|+ +.+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 467888999999999999974 6899999998542 23457788999 556666899999998 55
Q ss_pred eecCC-----------------eEEEEEEccCCCCHHHHHhcCCC------CCCHHHHHHHHHHHHHHHHHHHccCCCCe
Q 040702 573 CSNDD-----------------FKALVLEYMPLGSLEKCLYSGNY------ILDIFQGLNIMIDVASALEYLHFGYSVPI 629 (797)
Q Consensus 573 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~------~l~~~~~~~i~~qi~~al~yLH~~~~~~i 629 (797)
+..++ ..|+||||+ +|+|.+++..... .+++..++.|+.||+.||+||| +++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 55443 278999999 6799999975322 2335788899999999999999 8999
Q ss_pred EEcCCCCCceEEcCCCcEEEEeecCCccCCccCccccccccccCcccccccccccC-----------ccchHHHHHHHhh
Q 040702 630 IHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSG-----------EMRLKCWVNDSLL 698 (797)
Q Consensus 630 vHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~dv~s~~~ 698 (797)
+||||||+|||++.++.+||+|||+|+.... ......| +.|+|||.+.+. .++.++|+|++|+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999985321 2344567 999999999887 8999999999999
Q ss_pred hhhhhhccccccchhhh------------hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 699 ISVMIVVDANLLIREEK------------HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 699 ~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
..++.+.+..++..... .....+.++++.|++.||++||++.|+++
T Consensus 302 il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHHSSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHHCCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 98666655544433221 22345678899999999999999999986
No 230
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.1e-34 Score=303.84 Aligned_cols=237 Identities=20% Similarity=0.242 Sum_probs=185.2
Q ss_pred hcCCCccccccccCCcceeecc--------eEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKDG--------MEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~~--------~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 579 (797)
.++|+..+.||+|+||.||++. ..||||+++... ....+.+.+|++++++++||||+++++++..++ .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 4689999999999999999852 369999987653 223567889999999999999999999998765 8
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
++||||+++|+|.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999999999876556899999999999999999999 8999999999999999999999999999998764
Q ss_pred ccCcc-ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh------------------hhhhhc
Q 040702 660 EEDQS-LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE------------------EKHLMT 719 (797)
Q Consensus 660 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~------------------~~~~~~ 719 (797)
..... .......+|..|+|||.+.+..++.++|+|++|+..+..+. +..++... +.....
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 252 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCH
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCH
Confidence 33221 12234567889999999998899999999999998866554 33332211 112234
Q ss_pred ccccchhccccCCCCCCCChHHHHHhHHHHHH
Q 040702 720 KEQPMVRMGTDLSLGQFPASYSISKYLVYIRE 751 (797)
Q Consensus 720 ~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~ 751 (797)
.+.++++.|++.||++||++.++++.++.+..
T Consensus 253 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 253 DIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 56789999999999999999999998887644
No 231
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=8.9e-34 Score=321.26 Aligned_cols=227 Identities=21% Similarity=0.322 Sum_probs=188.5
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc--CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY--GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
.++|...+.||+|+||.||++ ++.||||++.... ......+.+|++++++++||||+++++++.+.+..|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999974 6889999997652 334567899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEc---CCCcEEEEeecCCccCCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD---DNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~---~~~~~kl~DFGla~~~~~ 660 (797)
||+++|+|.+.+.... .+++..+..++.|++.||.||| +.+|+||||||+||+++ .++.+||+|||+++....
T Consensus 101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999887654 4899999999999999999999 99999999999999995 456799999999986543
Q ss_pred cCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhcc
Q 040702 661 EDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMTK 720 (797)
Q Consensus 661 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~~ 720 (797)
.. .....+||+.|+|||.+. +.++.++|+|++|++.+..+.+..++.... ......
T Consensus 177 ~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 252 (486)
T 3mwu_A 177 NT---KMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD 252 (486)
T ss_dssp C-------CCTTGGGGCCGGGGG-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHH
T ss_pred CC---ccCCCcCCCCCCCHHHhC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHH
Confidence 22 234567999999999876 469999999999998866555444332111 122345
Q ss_pred cccchhccccCCCCCCCChHHHHHh
Q 040702 721 EQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 721 ~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
+.++++.|+..||.+|||+.++++.
T Consensus 253 ~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 253 AKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred HHHHHHHHcCCChhhCcCHHHHhcC
Confidence 6789999999999999999999874
No 232
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.3e-33 Score=305.18 Aligned_cols=241 Identities=22% Similarity=0.263 Sum_probs=192.9
Q ss_pred HHHHhcCCCccccccccCCcceeec---ceEEEEEEEEeccCCcchhHHHHHHHhhh--ccCCceeEeeeeeecCC----
Q 040702 507 LFQATNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGGAFKSFDIECGMMKR--IRHRNLIKIISSCSNDD---- 577 (797)
Q Consensus 507 l~~~~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~Hpniv~l~~~~~~~~---- 577 (797)
-....++|...+.||+|+||.||++ ++.||||++... ..+.+.+|++++.. ++||||+++++++...+
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 3445678999999999999999985 689999998643 24677889999887 78999999999998876
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHcc-----CCCCeEEcCCCCCceEEcCCCcEEEEee
Q 040702 578 FKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFG-----YSVPIIHCDLKPSNVLLDDNMVAHLSDF 652 (797)
Q Consensus 578 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~-----~~~~ivHrDlkp~NIll~~~~~~kl~DF 652 (797)
..++||||+++|+|.+++.... +++..++.++.|++.||+|||.. ++.+|+||||||+||+++.++.+||+||
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 191 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 191 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCC
T ss_pred eeEEEEeecCCCcHHHHHhccC--ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEEC
Confidence 7899999999999999998753 89999999999999999999932 1468999999999999999999999999
Q ss_pred cCCccCCccCccc--cccccccCcccccccccccC------ccchHHHHHHHhhhhhhhhccc----------cccchh-
Q 040702 653 GMAKPLLEEDQSL--TQTQTLATIGYMAPDEIFSG------EMRLKCWVNDSLLISVMIVVDA----------NLLIRE- 713 (797)
Q Consensus 653 Gla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~dv~s~~~~~~~~~~~~----------~~~~~~- 713 (797)
|+++......... ......||+.|+|||.+.+. .++.++|+|++|+..++.+... .++...
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~ 271 (342)
T 1b6c_B 192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271 (342)
T ss_dssp TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence 9997654332111 22445799999999988765 4457899999999886555431 111110
Q ss_pred ---------------------------hhhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 714 ---------------------------EKHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 714 ---------------------------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
..+....+.++++.||+.||++||++.++++.|+.+.+-
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 272 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 001122456789999999999999999999999988654
No 233
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.1e-34 Score=311.63 Aligned_cols=236 Identities=17% Similarity=0.201 Sum_probs=186.4
Q ss_pred cCHHHHHHHhcCCCccccccccCCcceeec----ceEEEEEEEEeccCCc-----------chhHHHHHHHhhhccCCce
Q 040702 502 FTYLELFQATNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGA-----------FKSFDIECGMMKRIRHRNL 566 (797)
Q Consensus 502 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~-----------~~~~~~E~~~l~~l~Hpni 566 (797)
..+.++....++|...+.||+|+||.||++ +..||||++....... .+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 346677888899999999999999999985 6899999997653221 2678899999999999999
Q ss_pred eEeeeeeec-----CCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE
Q 040702 567 IKIISSCSN-----DDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 641 (797)
Q Consensus 567 v~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll 641 (797)
+++++++.. ....|+||||++ |+|.+.+......+++..+..++.|++.||.||| +.+|+||||||+||++
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEE
Confidence 999999843 336899999997 5898888877667999999999999999999999 8999999999999999
Q ss_pred cCCCcEEEEeecCCccCCccCccccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhh------
Q 040702 642 DDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREE------ 714 (797)
Q Consensus 642 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~------ 714 (797)
+.++.+||+|||+++...... ......||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..++....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 244 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244 (362)
T ss_dssp CTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999999999999998543222 2344679999999999877 678999999999999866555444332211
Q ss_pred ------------------------------------------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 715 ------------------------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 715 ------------------------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......+.++++.|++.||++||++.|+++
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 011233668999999999999999998876
No 234
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8.7e-34 Score=301.03 Aligned_cols=230 Identities=24% Similarity=0.295 Sum_probs=193.8
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc-CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY-GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
.+.|...+.||+|+||.||++ ++.||||++.... ....+.+.+|+.++++++||||+++++++...+..|+|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 357899999999999999985 6899999998654 3345789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcc
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQS 664 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~ 664 (797)
|+++++|.+++... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 173 (303)
T 3a7i_A 101 YLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 173 (303)
T ss_dssp CCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred eCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence 99999999998754 4899999999999999999999 8999999999999999999999999999998654322
Q ss_pred ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh-----------------hhhhcccccchhc
Q 040702 665 LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE-----------------KHLMTKEQPMVRM 727 (797)
Q Consensus 665 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~~ 727 (797)
.......||+.|+|||.+.+..++.++|+|++|+..+..+....++.... ......+.++++.
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 253 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA 253 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHH
T ss_pred cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHH
Confidence 12345679999999999999999999999999998866555444332211 1122346788999
Q ss_pred cccCCCCCCCChHHHHHhHH
Q 040702 728 GTDLSLGQFPASYSISKYLV 747 (797)
Q Consensus 728 cl~~dp~~RPs~~~i~~~l~ 747 (797)
|++.||.+||++.++++...
T Consensus 254 ~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 254 CLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp HCCSSGGGSCCHHHHTTCHH
T ss_pred HcCCChhhCcCHHHHhhChh
Confidence 99999999999999988643
No 235
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.9e-34 Score=305.62 Aligned_cols=238 Identities=21% Similarity=0.206 Sum_probs=179.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhcc-CCceeEeeeeee--------cC
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIR-HRNLIKIISSCS--------ND 576 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~--------~~ 576 (797)
..+|...+.||+|+||.||++ ++.||||++........+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 458999999999999999975 5789999997665555678899999999996 999999999984 33
Q ss_pred CeEEEEEEccCCCCHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCceEEcCCCcEEEEee
Q 040702 577 DFKALVLEYMPLGSLEKCLYS--GNYILDIFQGLNIMIDVASALEYLHFGYSVP--IIHCDLKPSNVLLDDNMVAHLSDF 652 (797)
Q Consensus 577 ~~~~lv~e~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~--ivHrDlkp~NIll~~~~~~kl~DF 652 (797)
...++||||+. |+|.+++.. ....+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 46899999996 699888864 3335899999999999999999999 888 999999999999999999999999
Q ss_pred cCCccCCccCccc----------cccccccCccccccccc---ccCccchHHHHHHHhhhhhhhhccccccchhh-----
Q 040702 653 GMAKPLLEEDQSL----------TQTQTLATIGYMAPDEI---FSGEMRLKCWVNDSLLISVMIVVDANLLIREE----- 714 (797)
Q Consensus 653 Gla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----- 714 (797)
|+++......... ......||+.|+|||.+ .+..++.++|+|++|+..+..+....++....
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~ 262 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV 262 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh
Confidence 9998764322111 11245699999999988 56678999999999999866655444432211
Q ss_pred ---------hhhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 715 ---------KHLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 715 ---------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
......+.++++.|++.||.+||++.|+++.++.+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 263 NGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp ---CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11223567899999999999999999999999988765
No 236
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.6e-34 Score=323.44 Aligned_cols=227 Identities=20% Similarity=0.285 Sum_probs=185.2
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc--CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY--GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
.++|...+.||+|+||.||++ +..||||+++... ......+.+|+.+++.++||||++++++|.+.+..|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999974 5789999998653 234577899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCC---CcEEEEeecCCccCCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN---MVAHLSDFGMAKPLLE 660 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~---~~~kl~DFGla~~~~~ 660 (797)
||+++|+|.+.+.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.. +.+||+|||+|+....
T Consensus 116 e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999999887654 4899999999999999999999 8999999999999999764 4599999999986543
Q ss_pred cCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhcc
Q 040702 661 EDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMTK 720 (797)
Q Consensus 661 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~~ 720 (797)
.. .....+||+.|+|||.+. +.++.++|+|++|+..+..+.+..++.... ......
T Consensus 192 ~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 267 (494)
T 3lij_A 192 QK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEG 267 (494)
T ss_dssp TB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHH
T ss_pred Cc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHH
Confidence 22 234567999999999875 679999999999998866555544332211 112345
Q ss_pred cccchhccccCCCCCCCChHHHHHh
Q 040702 721 EQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 721 ~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
+.++++.|+..||.+|||+.|+++.
T Consensus 268 ~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 268 AKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHHHHHCCCChhhCccHHHHhcC
Confidence 6789999999999999999999874
No 237
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.8e-34 Score=308.28 Aligned_cols=229 Identities=18% Similarity=0.254 Sum_probs=192.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC---CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG---GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|...+.||+|+||.||++ ++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 468999999999999999984 57899999986532 2346788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999999987654 4899999999999999999999 8999999999999999999999999999998654222
Q ss_pred ccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchh----------------hhhhhcccccchh
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIRE----------------EKHLMTKEQPMVR 726 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~ 726 (797)
. ......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++... +......+.++++
T Consensus 196 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (335)
T 2owb_A 196 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 273 (335)
T ss_dssp C--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred c--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHH
Confidence 1 234467999999999999888999999999999886655544433221 1112234578899
Q ss_pred ccccCCCCCCCChHHHHHh
Q 040702 727 MGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 727 ~cl~~dp~~RPs~~~i~~~ 745 (797)
.|++.||++||++.|+++.
T Consensus 274 ~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 274 KMLQTDPTARPTINELLND 292 (335)
T ss_dssp HHTCSSGGGSCCGGGGGGS
T ss_pred HHccCChhHCcCHHHHhcC
Confidence 9999999999999999875
No 238
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=298.62 Aligned_cols=227 Identities=21% Similarity=0.267 Sum_probs=184.3
Q ss_pred CCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEccC
Q 040702 513 RFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEYMP 587 (797)
Q Consensus 513 ~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~~~ 587 (797)
+|.....||+|+||.||++ +..||||.+........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 4555569999999999985 57899999987665556789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC-CCcEEEEeecCCccCCccCcc
Q 040702 588 LGSLEKCLYSGNY--ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD-NMVAHLSDFGMAKPLLEEDQS 664 (797)
Q Consensus 588 ~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~-~~~~kl~DFGla~~~~~~~~~ 664 (797)
+++|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++.......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~- 178 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP- 178 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-
Confidence 9999999976532 4678889999999999999999 899999999999999987 89999999999986543221
Q ss_pred ccccccccCcccccccccccCc--cchHHHHHHHhhhhhhhhccccccchh-------------------hhhhhccccc
Q 040702 665 LTQTQTLATIGYMAPDEIFSGE--MRLKCWVNDSLLISVMIVVDANLLIRE-------------------EKHLMTKEQP 723 (797)
Q Consensus 665 ~~~~~~~gt~~y~aPE~~~~~~--~~~~~dv~s~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~ 723 (797)
......||+.|+|||.+.++. ++.++|+|++|+..+..+.+..++... +......+.+
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKA 257 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHH
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHH
Confidence 234457999999999987654 789999999999886555444333211 1112335568
Q ss_pred chhccccCCCCCCCChHHHHH
Q 040702 724 MVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 724 l~~~cl~~dp~~RPs~~~i~~ 744 (797)
+++.|++.||++||++.++++
T Consensus 258 li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 258 FILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHTTCSSTTTSCCHHHHHT
T ss_pred HHHHHccCChhhCCCHHHHhc
Confidence 899999999999999988875
No 239
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.7e-34 Score=306.28 Aligned_cols=228 Identities=20% Similarity=0.264 Sum_probs=183.4
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
.++|+..+.||+|+||.||++ +..||+|++........+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 468999999999999999985 688999999876656668899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCccc
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSL 665 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~ 665 (797)
+++++|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... ..
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 172 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--LQ 172 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--HH
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--cc
Confidence 9999999998765556899999999999999999999 899999999999999999999999999987643211 11
Q ss_pred cccccccCcccccccccc-----cCccchHHHHHHHhhhhhhhhccccccchh-------------------hhhhhccc
Q 040702 666 TQTQTLATIGYMAPDEIF-----SGEMRLKCWVNDSLLISVMIVVDANLLIRE-------------------EKHLMTKE 721 (797)
Q Consensus 666 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~ 721 (797)
......||+.|+|||.+. ...++.++|+|++|+..+..+....++... +......+
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEF 252 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHH
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHH
Confidence 223457999999999884 567889999999999876555444332221 11223346
Q ss_pred ccchhccccCCCCCCCChHHHH
Q 040702 722 QPMVRMGTDLSLGQFPASYSIS 743 (797)
Q Consensus 722 ~~l~~~cl~~dp~~RPs~~~i~ 743 (797)
.++++.|++.||++||++.+++
T Consensus 253 ~~li~~~l~~dp~~Rps~~~ll 274 (302)
T 2j7t_A 253 RDFLKIALDKNPETRPSAAQLL 274 (302)
T ss_dssp HHHHHHHSCSCTTTSCCHHHHT
T ss_pred HHHHHHHcccChhhCCCHHHHh
Confidence 7889999999999999987754
No 240
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.7e-34 Score=302.31 Aligned_cols=228 Identities=21% Similarity=0.277 Sum_probs=188.2
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC---------cchhHHHHHHHhhhcc-CCceeEeeeeee
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG---------AFKSFDIECGMMKRIR-HRNLIKIISSCS 574 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~---------~~~~~~~E~~~l~~l~-Hpniv~l~~~~~ 574 (797)
..++|...+.||+|+||.||++ ++.||||+++..... ..+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3578999999999999999974 689999999765321 1356788999999996 999999999999
Q ss_pred cCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecC
Q 040702 575 NDDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGM 654 (797)
Q Consensus 575 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGl 654 (797)
..+..++||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 9999999999999999999997654 4899999999999999999999 89999999999999999999999999999
Q ss_pred CccCCccCccccccccccCcccccccccc------cCccchHHHHHHHhhhhhhhhccccccchhh--------------
Q 040702 655 AKPLLEEDQSLTQTQTLATIGYMAPDEIF------SGEMRLKCWVNDSLLISVMIVVDANLLIREE-------------- 714 (797)
Q Consensus 655 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------- 714 (797)
++...... ......||+.|+|||.+. ...++.++|+|++|+..+..+.+..++....
T Consensus 171 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 247 (298)
T 1phk_A 171 SCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 247 (298)
T ss_dssp CEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred hhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcc
Confidence 98654322 234467999999999875 4568899999999998765554443321110
Q ss_pred ------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 715 ------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 715 ------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......+.++++.|++.||.+||++.|+++
T Consensus 248 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 248 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 123345778999999999999999877754
No 241
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.2e-34 Score=333.26 Aligned_cols=228 Identities=21% Similarity=0.253 Sum_probs=184.5
Q ss_pred ccccccCCcceeec-------ceEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEccCC
Q 040702 518 NLIGRGGFGPVYKD-------GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEYMPL 588 (797)
Q Consensus 518 ~~lg~G~~g~Vyk~-------~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~~~~ 588 (797)
+.||+|+||.||++ ++.||||+++.... ...+++.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999975 47899999976533 234789999999999999999999999965 458899999999
Q ss_pred CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcc-ccc
Q 040702 589 GSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQS-LTQ 667 (797)
Q Consensus 589 g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~-~~~ 667 (797)
|+|.+++.... .+++..+..|+.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+...... ...
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 99999997765 4899999999999999999999 899999999999999999999999999999876443321 223
Q ss_pred cccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchhh-----------------hhhhcccccchhccc
Q 040702 668 TQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIREE-----------------KHLMTKEQPMVRMGT 729 (797)
Q Consensus 668 ~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~~-----------------~~~~~~~~~l~~~cl 729 (797)
....||+.|+|||.+....++.++|||++|+..++.+. +..++.... ......+.++++.||
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl 609 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCW 609 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence 34457889999999999999999999999999866654 333332211 122335678899999
Q ss_pred cCCCCCCCChHHHHHhHHHHH
Q 040702 730 DLSLGQFPASYSISKYLVYIR 750 (797)
Q Consensus 730 ~~dp~~RPs~~~i~~~l~~i~ 750 (797)
+.||++||++.++++.|+.+.
T Consensus 610 ~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 610 TYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp CSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCHhHCcCHHHHHHHHHHHH
Confidence 999999999999999988764
No 242
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.5e-34 Score=311.61 Aligned_cols=226 Identities=19% Similarity=0.220 Sum_probs=187.6
Q ss_pred hcCCCccccccccCCcceeec---ceEEEEEEEEeccCCc---c--------------hhHHHHHHHhhhccCCceeEee
Q 040702 511 TNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGGA---F--------------KSFDIECGMMKRIRHRNLIKII 570 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~---~--------------~~~~~E~~~l~~l~Hpniv~l~ 570 (797)
.++|...+.||+|+||.||++ ++.||||++....... . +.+.+|+.++++++||||++++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 468999999999999999985 7999999998653221 1 7899999999999999999999
Q ss_pred eeeecCCeEEEEEEccCCCCHHHH------HhcC-CCCCCHHHHHHHHHHHHHHHHHHHccCC-CCeEEcCCCCCceEEc
Q 040702 571 SSCSNDDFKALVLEYMPLGSLEKC------LYSG-NYILDIFQGLNIMIDVASALEYLHFGYS-VPIIHCDLKPSNVLLD 642 (797)
Q Consensus 571 ~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~l~~~~~~~i~~qi~~al~yLH~~~~-~~ivHrDlkp~NIll~ 642 (797)
+++.+.+..|+||||+++|+|.++ +... ...+++..++.++.|++.||.||| + .+|+||||||+||+++
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILMD 186 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEEC
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEEc
Confidence 999999999999999999999998 5542 336899999999999999999999 7 9999999999999999
Q ss_pred CCCcEEEEeecCCccCCccCccccccccccCcccccccccccC-ccch-HHHHHHHhhhhhhhhccccccchhh------
Q 040702 643 DNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSG-EMRL-KCWVNDSLLISVMIVVDANLLIREE------ 714 (797)
Q Consensus 643 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~dv~s~~~~~~~~~~~~~~~~~~~------ 714 (797)
.++.+||+|||+++..... ......||+.|+|||.+.+. .++. ++|+|++|+..+..+.+..++....
T Consensus 187 ~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 262 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262 (348)
T ss_dssp TTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH
T ss_pred CCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence 9999999999999865332 23456799999999999877 6665 9999999998755554443332110
Q ss_pred ------------------------------hhhhcccccchhccccCCCCCCCChHHHH
Q 040702 715 ------------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSIS 743 (797)
Q Consensus 715 ------------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~ 743 (797)
......+.++++.|++.||.+||++.|++
T Consensus 263 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l 321 (348)
T 2pml_X 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDAL 321 (348)
T ss_dssp HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 12234566889999999999999987776
No 243
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.9e-35 Score=319.91 Aligned_cols=225 Identities=9% Similarity=0.003 Sum_probs=167.2
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC---CcchhHHHHHHHhhhc--cCCceeEee-------eee
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG---GAFKSFDIECGMMKRI--RHRNLIKII-------SSC 573 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l--~Hpniv~l~-------~~~ 573 (797)
...|...+.||+|+||.||++ ++.||||++..... ...+.+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 346889999999999999985 68999999987643 2245677786555555 599988855 343
Q ss_pred ecC-----------------CeEEEEEEccCCCCHHHHHhcCCCCCCHHHH------HHHHHHHHHHHHHHHccCCCCeE
Q 040702 574 SND-----------------DFKALVLEYMPLGSLEKCLYSGNYILDIFQG------LNIMIDVASALEYLHFGYSVPII 630 (797)
Q Consensus 574 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~------~~i~~qi~~al~yLH~~~~~~iv 630 (797)
..+ ...|+||||++ |+|.+++......+++..+ ..++.||++||+||| +++|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 322 23799999998 8999999864333455555 678899999999999 99999
Q ss_pred EcCCCCCceEEcCCCcEEEEeecCCccCCccCccccccccccCccccccccccc--CccchHHHHHHHhhhhhhhhcccc
Q 040702 631 HCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFS--GEMRLKCWVNDSLLISVMIVVDAN 708 (797)
Q Consensus 631 HrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~dv~s~~~~~~~~~~~~~ 708 (797)
||||||+|||++.++.+||+|||+|+..... .....||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999865321 124567799999999987 679999999999999866555444
Q ss_pred ccchhh-------------------------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 709 LLIREE-------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 709 ~~~~~~-------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
++.... ......+.++++.|++.||++||++.++++
T Consensus 292 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 333220 122346678899999999999999877763
No 244
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.3e-33 Score=307.40 Aligned_cols=234 Identities=22% Similarity=0.305 Sum_probs=192.7
Q ss_pred HHHHHHHhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--------cchhHHHHHHHhhhc-cCCceeEe
Q 040702 504 YLELFQATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--------AFKSFDIECGMMKRI-RHRNLIKI 569 (797)
Q Consensus 504 ~~~l~~~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--------~~~~~~~E~~~l~~l-~Hpniv~l 569 (797)
+.......++|...+.||+|+||.||++ |+.||||+++..... ..+.+.+|+.+++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3344455678999999999999999984 689999999865421 134678899999999 79999999
Q ss_pred eeeeecCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEE
Q 040702 570 ISSCSNDDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHL 649 (797)
Q Consensus 570 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl 649 (797)
++++...+..|+||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEE
Confidence 999999999999999999999999997654 4899999999999999999999 899999999999999999999999
Q ss_pred EeecCCccCCccCccccccccccCccccccccccc------CccchHHHHHHHhhhhhhhhccccccchhh---------
Q 040702 650 SDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFS------GEMRLKCWVNDSLLISVMIVVDANLLIREE--------- 714 (797)
Q Consensus 650 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------- 714 (797)
+|||+++...... ......||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..++....
T Consensus 242 ~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~ 318 (365)
T 2y7j_A 242 SDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM 318 (365)
T ss_dssp CCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred EecCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 9999998664332 2345679999999998863 358899999999999866665544432211
Q ss_pred -----------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 715 -----------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 715 -----------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......+.++++.|++.||++||++.++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 319 EGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 112234678999999999999999988875
No 245
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.4e-34 Score=322.83 Aligned_cols=227 Identities=22% Similarity=0.315 Sum_probs=187.5
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC-------------CcchhHHHHHHHhhhccCCceeEeeee
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-------------GAFKSFDIECGMMKRIRHRNLIKIISS 572 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-------------~~~~~~~~E~~~l~~l~Hpniv~l~~~ 572 (797)
.++|...+.||+|+||.||++ +..||||++..... ...+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 578999999999999999974 58999999975431 224678899999999999999999999
Q ss_pred eecCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC---cEEE
Q 040702 573 CSNDDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM---VAHL 649 (797)
Q Consensus 573 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~---~~kl 649 (797)
+.+++..|+||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEE
Confidence 999999999999999999999887654 4899999999999999999999 89999999999999998765 6999
Q ss_pred EeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh---------------
Q 040702 650 SDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------- 714 (797)
Q Consensus 650 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------- 714 (797)
+|||+|+...... ......||+.|+|||.+. +.++.++|+|++|+..+..+.+..++....
T Consensus 191 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~ 266 (504)
T 3q5i_A 191 VDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF 266 (504)
T ss_dssp CCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred EECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 9999998664322 234567999999999875 579999999999999866655544433211
Q ss_pred -----hhhhcccccchhccccCCCCCCCChHHHHHh
Q 040702 715 -----KHLMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 715 -----~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
......+.++++.|+..||.+|||+.|+++.
T Consensus 267 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 267 DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1234467789999999999999999998864
No 246
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.8e-34 Score=302.07 Aligned_cols=230 Identities=22% Similarity=0.286 Sum_probs=180.8
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeec---------
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSN--------- 575 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~--------- 575 (797)
..++|+..+.||+|+||.||++ ++.||||+++... ...+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3568999999999999999975 6899999997543 234678899999999999999999998865
Q ss_pred ----CCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEe
Q 040702 576 ----DDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSD 651 (797)
Q Consensus 576 ----~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 651 (797)
.+..|+||||+++|+|.+++......+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEee
Confidence 34689999999999999999876666888999999999999999999 89999999999999999999999999
Q ss_pred ecCCccCCccCc------------cccccccccCcccccccccccC-ccchHHHHHHHhhhhhhhhccccccchh-----
Q 040702 652 FGMAKPLLEEDQ------------SLTQTQTLATIGYMAPDEIFSG-EMRLKCWVNDSLLISVMIVVDANLLIRE----- 713 (797)
Q Consensus 652 FGla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~s~~~~~~~~~~~~~~~~~~----- 713 (797)
||+++....... ........||+.|+|||.+.+. .++.++|+|++|+..+..+. +......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-p~~~~~~~~~~~ 238 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY-PFSTGMERVNIL 238 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS-CCSSHHHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh-ccCCchhHHHHH
Confidence 999986532210 1122345799999999998754 68999999999998755553 2111111
Q ss_pred --------------hhhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 714 --------------EKHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 714 --------------~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
+......+.++++.|++.||.+||++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 1111223578999999999999999988874
No 247
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=7.9e-34 Score=297.01 Aligned_cols=228 Identities=22% Similarity=0.285 Sum_probs=182.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|...+.||+|+||.||++ ++.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 368999999999999999975 6899999997652 23356788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
|||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999997654 3899999999999999999999 8999999999999999999999999999998654322
Q ss_pred ccccccccccCcccccccccccCcc-chHHHHHHHhhhhhhhhccccccchh----------------hhhhhcccccch
Q 040702 663 QSLTQTQTLATIGYMAPDEIFSGEM-RLKCWVNDSLLISVMIVVDANLLIRE----------------EKHLMTKEQPMV 725 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~dv~s~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~ 725 (797)
......||+.|+|||.+.+..+ +.++|+|++|+..+..+.+..++... +......+.+++
T Consensus 166 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 242 (276)
T 2h6d_A 166 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLL 242 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred ---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHH
Confidence 2234578999999999987765 68999999999886555544433221 111234567889
Q ss_pred hccccCCCCCCCChHHHHHh
Q 040702 726 RMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 726 ~~cl~~dp~~RPs~~~i~~~ 745 (797)
+.|++.||++||++.++++.
T Consensus 243 ~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 243 MHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHTCSSGGGSCCHHHHHHS
T ss_pred HHHccCChhhCCCHHHHHhC
Confidence 99999999999999998874
No 248
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.6e-34 Score=330.28 Aligned_cols=234 Identities=21% Similarity=0.299 Sum_probs=192.9
Q ss_pred HhcCCCccccccccCCcceeec----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
..++|...+.||+|+||.||++ +..||||+++.... ..++|.+|++++++++||||+++++++.+ +..|+||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 4578899999999999999985 47899999975542 35789999999999999999999999876 678999999
Q ss_pred cCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCcc
Q 040702 586 MPLGSLEKCLYSGN-YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQS 664 (797)
Q Consensus 586 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~ 664 (797)
+++|+|.+++.... ..+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++...... .
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 418 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-Y 418 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-H
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-e
Confidence 99999999997532 34899999999999999999999 9999999999999999999999999999998654321 1
Q ss_pred ccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhcccccchh
Q 040702 665 LTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQPMVR 726 (797)
Q Consensus 665 ~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~l~~ 726 (797)
.......++..|+|||.+..+.++.++|||++|+..++.+. +..++... +......+.++++
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~ 498 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 498 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 12234457889999999999999999999999999866655 33222211 1112234678899
Q ss_pred ccccCCCCCCCChHHHHHhHHHH
Q 040702 727 MGTDLSLGQFPASYSISKYLVYI 749 (797)
Q Consensus 727 ~cl~~dp~~RPs~~~i~~~l~~i 749 (797)
.||+.||++||++.++++.|+.+
T Consensus 499 ~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 499 QCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHcCCChhHCcCHHHHHHHHHHH
Confidence 99999999999999999888764
No 249
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.9e-34 Score=309.78 Aligned_cols=223 Identities=22% Similarity=0.262 Sum_probs=179.1
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCC------
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDD------ 577 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~------ 577 (797)
.++|...+.||+|+||.||++ ++.||||++...... ..+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 468999999999999999975 689999998654322 2457889999999999999999999997653
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 578 FKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 578 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
..|+||||+ +++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 469999999 78999999874 3899999999999999999999 99999999999999999999999999999986
Q ss_pred CCccCccccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhh----------------------
Q 040702 658 LLEEDQSLTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREE---------------------- 714 (797)
Q Consensus 658 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~---------------------- 714 (797)
... .....+||++|+|||.+.+ ..++.++|+|++|+..++.+.+..++....
T Consensus 178 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 178 ADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred ccc-----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 532 2344679999999999887 678999999999998866555544332110
Q ss_pred -------------------------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 715 -------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 715 -------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
........++++.|+..||.+|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 011234567889999999999999999887
No 250
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-33 Score=310.46 Aligned_cols=232 Identities=20% Similarity=0.286 Sum_probs=182.5
Q ss_pred HHHhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecC------
Q 040702 508 FQATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSND------ 576 (797)
Q Consensus 508 ~~~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~------ 576 (797)
....++|...+.||+|+||.||++ ++.||||++.... ....+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 345678999999999999999985 6899999987543 2334799999999999999999998543
Q ss_pred --------------------------------CeEEEEEEccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHH
Q 040702 577 --------------------------------DFKALVLEYMPLGSLEKCLYS---GNYILDIFQGLNIMIDVASALEYL 621 (797)
Q Consensus 577 --------------------------------~~~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~al~yL 621 (797)
...++||||++ |+|.+.+.. ....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 34889999998 488777653 334689999999999999999999
Q ss_pred HccCCCCeEEcCCCCCceEEc-CCCcEEEEeecCCccCCccCccccccccccCcccccccccccCc-cchHHHHHHHhhh
Q 040702 622 HFGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGE-MRLKCWVNDSLLI 699 (797)
Q Consensus 622 H~~~~~~ivHrDlkp~NIll~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~s~~~~ 699 (797)
| +.+|+||||||+||+++ .++.+||+|||+|+...... ......||+.|+|||.+.+.. ++.++|+|++|+.
T Consensus 158 H---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 158 H---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp H---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred H---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9 99999999999999998 68899999999998654332 234467899999999987654 8999999999998
Q ss_pred hhhhhccccccchhh-h--------------------------------------------hhhcccccchhccccCCCC
Q 040702 700 SVMIVVDANLLIREE-K--------------------------------------------HLMTKEQPMVRMGTDLSLG 734 (797)
Q Consensus 700 ~~~~~~~~~~~~~~~-~--------------------------------------------~~~~~~~~l~~~cl~~dp~ 734 (797)
.+..+.+..++.... . .....+.++++.|+..||.
T Consensus 232 l~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 866555544433211 0 1122366899999999999
Q ss_pred CCCChHHHHH--hHHHHH
Q 040702 735 QFPASYSISK--YLVYIR 750 (797)
Q Consensus 735 ~RPs~~~i~~--~l~~i~ 750 (797)
+|||+.|+++ .++.+.
T Consensus 312 ~R~t~~e~l~hp~f~~~~ 329 (383)
T 3eb0_A 312 LRINPYEAMAHPFFDHLR 329 (383)
T ss_dssp GSCCHHHHHTSGGGHHHH
T ss_pred hCCCHHHHhcCHHHHHHH
Confidence 9999999986 444443
No 251
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4e-34 Score=324.17 Aligned_cols=227 Identities=22% Similarity=0.330 Sum_probs=190.7
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc---CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
.++|...+.||+|+||.||++ ++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..|+|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 468999999999999999974 6899999997653 23456789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE---cCCCcEEEEeecCCccCC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---DDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll---~~~~~~kl~DFGla~~~~ 659 (797)
|||+.+|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+|+...
T Consensus 105 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 99999999999987665 4899999999999999999999 8999999999999999 467899999999998654
Q ss_pred ccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhc
Q 040702 660 EEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMT 719 (797)
Q Consensus 660 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~ 719 (797)
... ......||+.|+|||.+.+ .++.++|+|++|+..+..+.+..++.... .....
T Consensus 181 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 256 (484)
T 3nyv_A 181 ASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE 256 (484)
T ss_dssp CCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCH
T ss_pred ccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCH
Confidence 322 2344679999999998754 79999999999999866555444332211 12334
Q ss_pred ccccchhccccCCCCCCCChHHHHHh
Q 040702 720 KEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 720 ~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
.+.++++.|+..||.+|||+.|+++.
T Consensus 257 ~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 257 SAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 56789999999999999999999874
No 252
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.4e-33 Score=297.42 Aligned_cols=223 Identities=20% Similarity=0.224 Sum_probs=182.4
Q ss_pred CCCccccccccCCcceeec-----ceEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeeec----CCeEEE
Q 040702 513 RFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCSN----DDFKAL 581 (797)
Q Consensus 513 ~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~----~~~~~l 581 (797)
.|...+.||+|+||.||++ +..||+|.+..... ...+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4677889999999999985 57899999986532 234678899999999999999999998865 356899
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCceEEc-CCCcEEEEeecCCccC
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVP--IIHCDLKPSNVLLD-DNMVAHLSDFGMAKPL 658 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~--ivHrDlkp~NIll~-~~~~~kl~DFGla~~~ 658 (797)
||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+ |+||||||+||+++ .++.+||+|||++...
T Consensus 107 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999997654 4899999999999999999999 888 99999999999998 7899999999999754
Q ss_pred CccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccch-------------------hhhhhhc
Q 040702 659 LEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIR-------------------EEKHLMT 719 (797)
Q Consensus 659 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 719 (797)
... ......||+.|+|||.+. +.++.++|+|++|+..+..+....++.. .+.....
T Consensus 183 ~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (290)
T 1t4h_A 183 RAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP 257 (290)
T ss_dssp CTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCH
T ss_pred ccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCH
Confidence 322 233457999999999765 5689999999999988665554433222 1111223
Q ss_pred ccccchhccccCCCCCCCChHHHHH
Q 040702 720 KEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 720 ~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.+.++++.|++.||.+||++.|+++
T Consensus 258 ~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 258 EVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHccCChhhCCCHHHHhh
Confidence 5678999999999999999988774
No 253
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.2e-33 Score=308.16 Aligned_cols=229 Identities=21% Similarity=0.225 Sum_probs=186.8
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC-cchhHHHHHHHhhhccCCceeEeeeeeecC-----CeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG-AFKSFDIECGMMKRIRHRNLIKIISSCSND-----DFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~-----~~~ 579 (797)
.++|...+.||+|+||.||++ +..||||++...... ..+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999985 588999999754322 236788999999999999999999998755 368
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
|+||||++ |+|.+++.... +++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~iv~e~~~-~~L~~~l~~~~--~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99999997 59999987653 899999999999999999999 9999999999999999999999999999998664
Q ss_pred ccCccc-cccccccCcccccccccccCc-cchHHHHHHHhhhhhhhhccccccchhh-----------------------
Q 040702 660 EEDQSL-TQTQTLATIGYMAPDEIFSGE-MRLKCWVNDSLLISVMIVVDANLLIREE----------------------- 714 (797)
Q Consensus 660 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------------- 714 (797)
...... ......||+.|+|||.+.++. ++.++|+|++|+..+..+.+..++....
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTC
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 332211 234568999999999876544 8999999999999866555444332110
Q ss_pred ------------------------hhhhcccccchhccccCCCCCCCChHHHHHh
Q 040702 715 ------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 715 ------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
......+.++++.|+..||++||++.|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1122346689999999999999999998863
No 254
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=8.4e-34 Score=312.21 Aligned_cols=224 Identities=23% Similarity=0.302 Sum_probs=176.9
Q ss_pred hcCCCccccccccCCcceeec----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCC------eEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDD------FKA 580 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~------~~~ 580 (797)
..+|...+.||+|+||.||++ +..||+|++.... ....+|+++++.++||||+++++++...+ ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 357999999999999999975 4569999886443 22347999999999999999999986443 378
Q ss_pred EEEEccCCCCHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEc-CCCcEEEEeecCCcc
Q 040702 581 LVLEYMPLGSLEKCLY--SGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGMAKP 657 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~--~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~-~~~~~kl~DFGla~~ 657 (797)
+||||++++.+..... .....+++..++.++.|++.||+||| +.+|+||||||+||+++ .++.+||+|||+|+.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999998754333321 22335899999999999999999999 99999999999999999 799999999999986
Q ss_pred CCccCccccccccccCcccccccccccC-ccchHHHHHHHhhhhhhhhccccccchhhh---------------------
Q 040702 658 LLEEDQSLTQTQTLATIGYMAPDEIFSG-EMRLKCWVNDSLLISVMIVVDANLLIREEK--------------------- 715 (797)
Q Consensus 658 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~--------------------- 715 (797)
..... ......||+.|+|||.+.+. .++.++|+|++|+..++.+.+..++.....
T Consensus 192 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 192 LIAGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CCTTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred ccCCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 54332 23346789999999998765 589999999999998666655444332110
Q ss_pred ------------------------hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 ------------------------HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 ------------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.....+.++++.|+..||.+||++.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 12235668999999999999999988875
No 255
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=307.18 Aligned_cols=239 Identities=19% Similarity=0.238 Sum_probs=190.7
Q ss_pred HhcCCCccccccccCCcceeec--ceEEEEEEEEecc--CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEEc
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD--GMEVAIKVFNLQY--GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e~ 585 (797)
..++|+..+.||+|+||.||++ +..||+|+++... ....+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~ 110 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSL 110 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeec
Confidence 3578999999999999999986 3579999987553 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC---
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED--- 662 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~--- 662 (797)
+++++|.+++...+..+++..+..++.|++.||+||| +.+|+||||||+||+++ ++.+||+|||+++......
T Consensus 111 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 111 CKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp CCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 9999999999876656899999999999999999999 89999999999999998 6799999999987543211
Q ss_pred ccccccccccCccccccccccc---------CccchHHHHHHHhhhhhhhhccccccchhhh------------------
Q 040702 663 QSLTQTQTLATIGYMAPDEIFS---------GEMRLKCWVNDSLLISVMIVVDANLLIREEK------------------ 715 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~------------------ 715 (797)
.........||+.|+|||.+.. ..++.++|+|++|+..+..+....++.....
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 266 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQI 266 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCS
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcC
Confidence 1112234569999999998864 4578999999999987665554443322111
Q ss_pred hhhcccccchhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 716 HLMTKEQPMVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 716 ~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
.....+.++++.|++.||++||++.++++.++.+.+-
T Consensus 267 ~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 267 GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 1234677899999999999999999999988876554
No 256
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1e-33 Score=309.31 Aligned_cols=225 Identities=21% Similarity=0.230 Sum_probs=177.1
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCC------
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDD------ 577 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~------ 577 (797)
.++|...+.||+|+||.||++ ++.||||++...... ..+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 368999999999999999975 689999999865322 2457889999999999999999999997664
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 578 FKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 578 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
..|+||||+++ +|.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999975 78888864 3789999999999999999999 89999999999999999999999999999986
Q ss_pred CCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh-----------------------
Q 040702 658 LLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE----------------------- 714 (797)
Q Consensus 658 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------------- 714 (797)
..... ......||+.|+|||.+.+..++.++|+|++|+..+..+.+..++....
T Consensus 177 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 177 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred ccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 53221 2344679999999999999899999999999998865555443322110
Q ss_pred -----------------------------------hhhhcccccchhccccCCCCCCCChHHHHHh
Q 040702 715 -----------------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 715 -----------------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
......+.++++.|+..||++|||+.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0012345689999999999999999999874
No 257
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.3e-33 Score=329.47 Aligned_cols=237 Identities=22% Similarity=0.257 Sum_probs=191.5
Q ss_pred hcCCCccccccccCCcceeec--------ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD--------GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKAL 581 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~--------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 581 (797)
.++|...+.||+|+||.||++ +..||||.++.... ...+.+.+|+.++++++||||+++++++. ++..|+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 467888999999999999975 25699998865432 22467899999999999999999999985 456899
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCcc
Q 040702 582 VLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEE 661 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~ 661 (797)
||||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999999999877666899999999999999999999 899999999999999999999999999999876433
Q ss_pred CccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhc-cccccchh-----------------hhhhhccccc
Q 040702 662 DQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVV-DANLLIRE-----------------EKHLMTKEQP 723 (797)
Q Consensus 662 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~ 723 (797)
. ........||+.|||||.+....++.++|+|++|+..++.+. +..++... +......+.+
T Consensus 545 ~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 623 (656)
T 2j0j_A 545 T-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 623 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHHH
T ss_pred c-ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHH
Confidence 2 222334567889999999998899999999999998866553 33222211 1122345678
Q ss_pred chhccccCCCCCCCChHHHHHhHHHHHHH
Q 040702 724 MVRMGTDLSLGQFPASYSISKYLVYIREL 752 (797)
Q Consensus 724 l~~~cl~~dp~~RPs~~~i~~~l~~i~~~ 752 (797)
+++.||+.||++||++.++++.|+.+.+.
T Consensus 624 li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 624 LMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999987654
No 258
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-33 Score=297.55 Aligned_cols=231 Identities=19% Similarity=0.244 Sum_probs=185.5
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc----CCcchhHHHHHHHhhhccCCceeEeeeeee--cCCeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY----GGAFKSFDIECGMMKRIRHRNLIKIISSCS--NDDFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~--~~~~~ 579 (797)
.++|...+.||+|+||.||++ +..||||+++... ....+.+.+|++++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999974 5789999997652 234567899999999999999999999984 44578
Q ss_pred EEEEEccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccC
Q 040702 580 ALVLEYMPLGSLEKCLYSG-NYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 658 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~ 658 (797)
|+||||++++ +.+++... ...+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 76766543 336899999999999999999999 899999999999999999999999999999866
Q ss_pred CccCccccccccccCcccccccccccCc--cchHHHHHHHhhhhhhhhccccccchhh----------------hhhhcc
Q 040702 659 LEEDQSLTQTQTLATIGYMAPDEIFSGE--MRLKCWVNDSLLISVMIVVDANLLIREE----------------KHLMTK 720 (797)
Q Consensus 659 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~dv~s~~~~~~~~~~~~~~~~~~~----------------~~~~~~ 720 (797)
.............||+.|+|||.+.+.. ++.++|+|++|+..+..+.+..++.... ......
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 239 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPP 239 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCCSSSCHH
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCCCccCHH
Confidence 4333233334567999999999887543 4789999999998866555544333211 112334
Q ss_pred cccchhccccCCCCCCCChHHHHHh
Q 040702 721 EQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 721 ~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
+.++++.|++.||.+||++.|+++.
T Consensus 240 l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 240 LSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHccCChhhCCCHHHHhcC
Confidence 6789999999999999999999875
No 259
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.1e-34 Score=306.89 Aligned_cols=238 Identities=26% Similarity=0.294 Sum_probs=186.0
Q ss_pred ccCHHHHHHHhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhc-cCCceeEeeeeee
Q 040702 501 RFTYLELFQATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRI-RHRNLIKIISSCS 574 (797)
Q Consensus 501 ~~~~~~l~~~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~ 574 (797)
.+++.++....++|+..+.||+|+||.||++ ++.||||++.... ...+.+.+|+.+++++ +||||+++++++.
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 3444445556789999999999999999984 5799999997553 3357889999999999 7999999999997
Q ss_pred c------CCeEEEEEEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcE
Q 040702 575 N------DDFKALVLEYMPLGSLEKCLYSGN-YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVA 647 (797)
Q Consensus 575 ~------~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~ 647 (797)
. .+..|+||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCE
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCE
Confidence 6 468899999999999999997653 35899999999999999999999 8999999999999999999999
Q ss_pred EEEeecCCccCCccCccccccccccCcccccccccc-----cCccchHHHHHHHhhhhhhhhccccccchhh--------
Q 040702 648 HLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIF-----SGEMRLKCWVNDSLLISVMIVVDANLLIREE-------- 714 (797)
Q Consensus 648 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------- 714 (797)
||+|||++....... .......||+.|+|||.+. ...++.++|+|++|+..+..+.+..++....
T Consensus 169 kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246 (326)
T ss_dssp EECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred EEeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh
Confidence 999999998653221 1234457999999999887 5668899999999998866555444332211
Q ss_pred ----------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 715 ----------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 715 ----------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......+.++++.|+..||.+||++.++++
T Consensus 247 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 247 PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 112235678999999999999999998876
No 260
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.4e-33 Score=298.70 Aligned_cols=227 Identities=22% Similarity=0.308 Sum_probs=183.7
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
++|+..+.||+|+||.||++ ++.||||+++.... ...+.+.+|+.++++++||||+++++++..++..|+|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57899999999999999975 68999999875532 234678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 585 YMPLGSLEKCLYSGN-YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
|++ |+|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 997 59999987654 35889999999999999999999 8999999999999999999999999999997653221
Q ss_pred cccccccccCcccccccccccCc-cchHHHHHHHhhhhhhhhccccccchhhh---------------------------
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGE-MRLKCWVNDSLLISVMIVVDANLLIREEK--------------------------- 715 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~s~~~~~~~~~~~~~~~~~~~~--------------------------- 715 (797)
.......||+.|+|||.+.+.. ++.++|+|++|+..+..+.+..++.....
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 158 -RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp -BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred -cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcc
Confidence 1233457899999999987765 78999999999987655554433322110
Q ss_pred ------------------hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 ------------------HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 ------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.....+.++++.|++.||++||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11234467899999999999999887764
No 261
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.6e-33 Score=301.72 Aligned_cols=227 Identities=22% Similarity=0.236 Sum_probs=182.9
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEecc--------CCcchhHHHHHHHhhhccCCceeEeeeeeecC
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY--------GGAFKSFDIECGMMKRIRHRNLIKIISSCSND 576 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~ 576 (797)
..++|...+.||+|+||.||++ ++.||||++.... ......+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3468999999999999999985 5899999986542 12235688999999999999999999998766
Q ss_pred CeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCc---EEEEeec
Q 040702 577 DFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV---AHLSDFG 653 (797)
Q Consensus 577 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~---~kl~DFG 653 (797)
+ .|+||||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred c-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 5 899999999999999887654 4899999999999999999999 899999999999999987654 9999999
Q ss_pred CCccCCccCccccccccccCcccccccccc---cCccchHHHHHHHhhhhhhhhccccccchh-----------------
Q 040702 654 MAKPLLEEDQSLTQTQTLATIGYMAPDEIF---SGEMRLKCWVNDSLLISVMIVVDANLLIRE----------------- 713 (797)
Q Consensus 654 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~----------------- 713 (797)
+++...... ......||+.|+|||.+. ...++.++|+|++|+..+..+.+..++...
T Consensus 163 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (322)
T 2ycf_A 163 HSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239 (322)
T ss_dssp TCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCC
T ss_pred cceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcccc
Confidence 998653221 223457999999999874 466889999999999886555544333211
Q ss_pred ----hhhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 714 ----EKHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 714 ----~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.......+.++++.|++.||++||++.++++
T Consensus 240 ~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 240 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1122345678899999999999999999875
No 262
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3e-34 Score=300.73 Aligned_cols=231 Identities=20% Similarity=0.233 Sum_probs=187.1
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeee--cCCeEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCS--NDDFKAL 581 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~--~~~~~~l 581 (797)
.++|+..+.||+|+||.||++ ++.||+|++..... ...+.+.+|+.++++++||||+++++++. ..+..|+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999984 68899999986532 23467889999999999999999999875 4568999
Q ss_pred EEEccCCCCHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCC-----eEEcCCCCCceEEcCCCcEEEEeec
Q 040702 582 VLEYMPLGSLEKCLYSG---NYILDIFQGLNIMIDVASALEYLHFGYSVP-----IIHCDLKPSNVLLDDNMVAHLSDFG 653 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~al~yLH~~~~~~-----ivHrDlkp~NIll~~~~~~kl~DFG 653 (797)
||||+++|+|.+++... ...+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998653 224899999999999999999999 777 9999999999999999999999999
Q ss_pred CCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh-----------------hh
Q 040702 654 MAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE-----------------KH 716 (797)
Q Consensus 654 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-----------------~~ 716 (797)
+++...... .......||+.|+|||.+.+..++.++|+|++|+..+..+....++.... ..
T Consensus 162 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~ 239 (279)
T 2w5a_A 162 LARILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYR 239 (279)
T ss_dssp HHHHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTT
T ss_pred hheeecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcc
Confidence 998653322 12234579999999999998899999999999998865554443322211 11
Q ss_pred hhcccccchhccccCCCCCCCChHHHHHhH
Q 040702 717 LMTKEQPMVRMGTDLSLGQFPASYSISKYL 746 (797)
Q Consensus 717 ~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l 746 (797)
....+.++++.|++.||++||++.|+++..
T Consensus 240 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 240 YSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred cCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 234567899999999999999999998754
No 263
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.9e-34 Score=303.62 Aligned_cols=232 Identities=21% Similarity=0.246 Sum_probs=171.7
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEecc-CCcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY-GGAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
..++|...+.||+|+||.||++ ++.||||++.... ....+++.+|+.++++++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 4578999999999999999985 5889999986543 234567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhc-------CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCc
Q 040702 584 EYMPLGSLEKCLYS-------GNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 656 (797)
Q Consensus 584 e~~~~g~L~~~l~~-------~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~ 656 (797)
||+++|+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999864 2335899999999999999999999 8999999999999999999999999999987
Q ss_pred cCCccCcc---ccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhhh-----------------
Q 040702 657 PLLEEDQS---LTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREEK----------------- 715 (797)
Q Consensus 657 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~----------------- 715 (797)
........ .......||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..++.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 249 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccc
Confidence 65432211 12234579999999998875 4588999999999988665554443322110
Q ss_pred ---------hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 716 ---------HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 716 ---------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.....+.++++.|++.||.+||++.++++
T Consensus 250 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11123567899999999999999988874
No 264
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2e-33 Score=312.49 Aligned_cols=189 Identities=21% Similarity=0.292 Sum_probs=161.1
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhc------cCCceeEeeeeeecCCeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRI------RHRNLIKIISSCSNDDFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l------~Hpniv~l~~~~~~~~~~ 579 (797)
..+|+..+.||+|+||.||++ ++.||||+++... ...+.+.+|+++++.+ +|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 357999999999999999985 6899999997432 2235677899888887 477999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCc--EEEEeecCCc
Q 040702 580 ALVLEYMPLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV--AHLSDFGMAK 656 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~--~kl~DFGla~ 656 (797)
++||||+. ++|.+++..... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++. +||+|||+|+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 699998876543 5899999999999999999999 899999999999999999887 9999999997
Q ss_pred cCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccc
Q 040702 657 PLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANL 709 (797)
Q Consensus 657 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~ 709 (797)
.... .....+||+.|||||.+.+..++.++|+|++|+..++.+.+..+
T Consensus 251 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~p 298 (429)
T 3kvw_A 251 YEHQ-----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298 (429)
T ss_dssp ETTC-----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ecCC-----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCC
Confidence 5432 22346799999999999999999999999999998665554433
No 265
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=300.36 Aligned_cols=228 Identities=21% Similarity=0.276 Sum_probs=178.6
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeee-----------
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCS----------- 574 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~----------- 574 (797)
.++|...+.||+|+||.||++ ++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 368999999999999999985 6899999998665455678899999999999999999999874
Q ss_pred ---cCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEc-CCCcEEEE
Q 040702 575 ---NDDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-DNMVAHLS 650 (797)
Q Consensus 575 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~-~~~~~kl~ 650 (797)
+.+..|+||||++ |+|.+++... .+++..++.++.|++.||+||| +.+|+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 5999998754 4889999999999999999999 89999999999999997 56799999
Q ss_pred eecCCccCCccCc-cccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhh--------------
Q 040702 651 DFGMAKPLLEEDQ-SLTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREE-------------- 714 (797)
Q Consensus 651 DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------- 714 (797)
|||+++....... ........||..|+|||.+.. ..++.++|+|++|+..+..+.+..++....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 243 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999986532211 112234568999999998876 678999999999998766555443332111
Q ss_pred --------------------------------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 715 --------------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 715 --------------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......+.++++.|++.||++||++.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 112345678999999999999999888864
No 266
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=314.38 Aligned_cols=228 Identities=19% Similarity=0.317 Sum_probs=176.2
Q ss_pred HhcCCCccccccccCCccee-e---cceEEEEEEEEeccCCcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEEEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVY-K---DGMEVAIKVFNLQYGGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vy-k---~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lv~e 584 (797)
...+|...+.||+|+||.|| + .++.||||++... ....+.+|+++++.+ +|||||++++++.+.+..|+|||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPE---CFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTT---TEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 34578899999999999965 3 3689999998643 234567899999999 79999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC-----CCcEEEEeecCCccCC
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD-----NMVAHLSDFGMAKPLL 659 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~-----~~~~kl~DFGla~~~~ 659 (797)
|++ |+|.+++........+..+..++.||++||+||| +.+|+||||||+||+++. ...+||+|||+|+...
T Consensus 99 ~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 996 5999999876654555567889999999999999 899999999999999953 3468899999998764
Q ss_pred ccCc-cccccccccCcccccccccc---cCccchHHHHHHHhhhhhhhhc-cccccchhhhh------------------
Q 040702 660 EEDQ-SLTQTQTLATIGYMAPDEIF---SGEMRLKCWVNDSLLISVMIVV-DANLLIREEKH------------------ 716 (797)
Q Consensus 660 ~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~~~~------------------ 716 (797)
.... ........||+.|+|||.+. ...++.++|+|++|+..++.+. +..+++.....
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 254 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEK 254 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTC
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccc
Confidence 3321 12334567999999999987 4567889999999999866655 44333321111
Q ss_pred -hhcccccchhccccCCCCCCCChHHHHH
Q 040702 717 -LMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 717 -~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......++++.|++.||.+||++.++++
T Consensus 255 ~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 255 HEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1112567999999999999999999874
No 267
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=4.4e-36 Score=338.51 Aligned_cols=363 Identities=17% Similarity=0.139 Sum_probs=192.6
Q ss_pred CCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCccccc----CCccccCCCCCCEEEccCCcCcccCCC
Q 040702 20 PSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGV----VPTTIFNVSTLKSLYLHSNSLSGRLPS 95 (797)
Q Consensus 20 l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~----~p~~~~~l~~L~~L~Ls~N~l~~~l~~ 95 (797)
+++|++|||++|++++.. ....+..+++|++|++++|+++.. ++..+..+++|++|+|++|.++...+.
T Consensus 2 ~~~l~~L~Ls~~~l~~~~-------~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 74 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDAR-------WAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVH 74 (461)
T ss_dssp CEEEEEEEEESCCCCHHH-------HHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHH
T ss_pred CccceehhhhhcccCchh-------HHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHH
Confidence 456788888888754321 112256677888888888888742 466677778888888888888643333
Q ss_pred ccccCCC----CccEEEccCccccc----cCCchhhCCCCCCEEEccCCcCcccCCcccc-----CCCCCCeeeccCccC
Q 040702 96 SADVRLP----NLKELHLWGNNFIG----TIPSFIFNASKLSELGLQKNSFSGSIPNTFG-----NLRNLKWLGLNDNYL 162 (797)
Q Consensus 96 ~~~~~l~----~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~-----~l~~L~~L~L~~N~l 162 (797)
.++..++ +|++|+|++|+++. .++..|..+++|++|+|++|+|+...+..+. ..++|++|+|++|.+
T Consensus 75 ~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 154 (461)
T 1z7x_W 75 CVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSL 154 (461)
T ss_dssp HHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCC
Confidence 3344444 68888888888773 4466777777888888888877654443332 245677777777776
Q ss_pred cCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhc----cccCCcEEEccCCccccc----CChhhhhhhhhHhhh
Q 040702 163 TSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGN----LSQSMEDFWMDNCNISGS----IPEEINNLTNLILQL 234 (797)
Q Consensus 163 ~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~----l~~~L~~L~L~~n~i~~~----~p~~~~~l~~L~L~~ 234 (797)
+...... -...+..+++|+.|++++|++....+..+.. ...+|+.|++++|.++.. ++..+..+++| ++
T Consensus 155 ~~~~~~~-l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L--~~ 231 (461)
T 1z7x_W 155 SAASCEP-LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASL--RE 231 (461)
T ss_dssp BGGGHHH-HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTC--CE
T ss_pred CHHHHHH-HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCc--cE
Confidence 6532110 0012344566777777777665443333332 111566666666665542 23344444444 45
Q ss_pred cccccccccCCC-----chhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEcc
Q 040702 235 LSLEGNQLEGSI-----PDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLS 309 (797)
Q Consensus 235 L~Ls~N~l~~~~-----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~ 309 (797)
|++++|.+.+.. +..+..+++|++|++++|.++...... ++..+..+++|++|+++
T Consensus 232 L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~-------------------l~~~l~~~~~L~~L~Ls 292 (461)
T 1z7x_W 232 LALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGD-------------------LCRVLRAKESLKELSLA 292 (461)
T ss_dssp EECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHH-------------------HHHHHHHCTTCCEEECT
T ss_pred EeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHH-------------------HHHHHhhCCCcceEECC
Confidence 555555444321 111123444555555555444320000 33333344445555555
Q ss_pred CCcCCCCCCccccc-----cccccEEeccCcccccc----cCccccCCcccceecccCccccCCCChhhhc-----cccC
Q 040702 310 SNFFTGPLPLKIGN-----LNVLVQLDLSMNNFSCV----IPTKIGGLKDLQYLFLEYNRLQGSIPNSIGD-----LISL 375 (797)
Q Consensus 310 ~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L 375 (797)
+|.+++..+..+.. .++|++|++++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|
T Consensus 293 ~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L 372 (461)
T 1z7x_W 293 GNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVL 372 (461)
T ss_dssp TCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCC
T ss_pred CCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCce
Confidence 55444322222221 13455555555555433 2333444455555555555554433333332 3455
Q ss_pred CeeeecCCcCCC----CCChhhhccCCCCeEEccCCcCcc
Q 040702 376 KSLNLSNNNLSG----TIPISLEKLLDLKDINVSFNRLEG 411 (797)
Q Consensus 376 ~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~ 411 (797)
++|+|++|.+++ .+|..+..+++|+.|++++|++++
T Consensus 373 ~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 373 RVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp CEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred EEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 555555555553 445555555555555555555543
No 268
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.9e-33 Score=310.34 Aligned_cols=224 Identities=19% Similarity=0.215 Sum_probs=181.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhcc--------CCceeEeeeeee---
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIR--------HRNLIKIISSCS--- 574 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~--------Hpniv~l~~~~~--- 574 (797)
.++|...+.||+|+||.||++ ++.||||+++... ...+.+.+|+++++.++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 368999999999999999985 6899999997432 23467889999999996 788999999987
Q ss_pred -cCCeEEEEEEccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCceEEcCCC------
Q 040702 575 -NDDFKALVLEYMPLGSLEKCLYSG-NYILDIFQGLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLDDNM------ 645 (797)
Q Consensus 575 -~~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~al~yLH~~~~~-~ivHrDlkp~NIll~~~~------ 645 (797)
.....|+||||+. |++.+.+... ...+++..++.++.||+.||+||| ++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 5568999999994 5666655443 346899999999999999999999 87 999999999999999775
Q ss_pred -------------------------------------------cEEEEeecCCccCCccCccccccccccCccccccccc
Q 040702 646 -------------------------------------------VAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEI 682 (797)
Q Consensus 646 -------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~ 682 (797)
.+||+|||+|+..... .....||+.|+|||.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence 7999999999865322 2345799999999999
Q ss_pred ccCccchHHHHHHHhhhhhhhhccccccchhh------------------------------------------------
Q 040702 683 FSGEMRLKCWVNDSLLISVMIVVDANLLIREE------------------------------------------------ 714 (797)
Q Consensus 683 ~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~------------------------------------------------ 714 (797)
.+..++.++|+|++|++.++.+.+..++....
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 99999999999999999866665544432110
Q ss_pred ----------------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 715 ----------------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 715 ----------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......+.++++.|++.||++|||+.|+++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 111223568999999999999999988874
No 269
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=6.3e-33 Score=297.61 Aligned_cols=228 Identities=22% Similarity=0.300 Sum_probs=186.0
Q ss_pred HhcCCCccccccccCCcceeec------ceEEEEEEEEeccC--CcchhHHHHHHHhhhc---cCCceeEeeeeee----
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD------GMEVAIKVFNLQYG--GAFKSFDIECGMMKRI---RHRNLIKIISSCS---- 574 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~------~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l---~Hpniv~l~~~~~---- 574 (797)
+.++|...+.||+|+||.||++ ++.||||+++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4578999999999999999974 57899999976542 2345788899888877 7999999999987
Q ss_pred -cCCeEEEEEEccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEee
Q 040702 575 -NDDFKALVLEYMPLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDF 652 (797)
Q Consensus 575 -~~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DF 652 (797)
.....++||||++ |+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 4567899999997 699999876543 5899999999999999999999 899999999999999999999999999
Q ss_pred cCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh------------------
Q 040702 653 GMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE------------------ 714 (797)
Q Consensus 653 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~------------------ 714 (797)
|+++...... ......||+.|+|||.+.++.++.++|+|++|+..+..+.+..++....
T Consensus 165 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 165 GLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241 (326)
T ss_dssp CSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred cccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence 9998654222 2345679999999999999999999999999998765554443332111
Q ss_pred -------------------------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 715 -------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 715 -------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......+.++++.|++.||++||++.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 011223457889999999999999888764
No 270
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.7e-33 Score=304.03 Aligned_cols=229 Identities=21% Similarity=0.238 Sum_probs=183.5
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecC-----CeE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSND-----DFK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~-----~~~ 579 (797)
.++|...+.||+|+||.||++ ++.||||++..... .....+.+|++++++++||||+++++++..+ ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999985 68899999964432 2245678999999999999999999987654 678
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
|+||||+. |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 5999998775 3899999999999999999999 8999999999999999999999999999998654
Q ss_pred ccCccc--------cccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhh----------------
Q 040702 660 EEDQSL--------TQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREE---------------- 714 (797)
Q Consensus 660 ~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~---------------- 714 (797)
...... ......||+.|+|||.+.. ..++.++|+|++|+..+..+.+..++....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCc
Confidence 321110 1233578999999998765 678999999999998755554443332110
Q ss_pred --------------------------------hhhhcccccchhccccCCCCCCCChHHHHHh
Q 040702 715 --------------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 715 --------------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
......+.++++.|++.||++||++.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 1122345678999999999999999998873
No 271
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.5e-33 Score=297.22 Aligned_cols=227 Identities=19% Similarity=0.170 Sum_probs=171.4
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC-c-chhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG-A-FKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~-~-~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
.++|+..+.||+|+||.||++ ++.||||+++..... . .+.+..+...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 478999999999999999974 689999999755322 1 233444555578889999999999999999999999
Q ss_pred EccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 584 EYMPLGSLEKCLYS---GNYILDIFQGLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 584 e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~al~yLH~~~~~-~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
||+++ +|.+++.. ....+++..+..++.|++.||+||| ++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99974 88777653 3346899999999999999999999 87 99999999999999999999999999998654
Q ss_pred ccCccccccccccCccccccccc----ccCccchHHHHHHHhhhhhhhhccccccchh-------------------hhh
Q 040702 660 EEDQSLTQTQTLATIGYMAPDEI----FSGEMRLKCWVNDSLLISVMIVVDANLLIRE-------------------EKH 716 (797)
Q Consensus 660 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~-------------------~~~ 716 (797)
... ......||+.|+|||.+ ....++.++|+|++|+..+..+....++... ...
T Consensus 162 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (290)
T 3fme_A 162 DDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADK 238 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTT
T ss_pred ccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCccccc
Confidence 322 22335799999999986 5667899999999999986655544433210 012
Q ss_pred hhcccccchhccccCCCCCCCChHHHHH
Q 040702 717 LMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 717 ~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
....+.++++.|++.||++||++.|+++
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 239 FSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 2335678899999999999999999876
No 272
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.5e-33 Score=295.25 Aligned_cols=250 Identities=29% Similarity=0.422 Sum_probs=142.9
Q ss_pred CCCCEEEccCCcCcc--cCCCccccCCCCccEEEccC-ccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCC
Q 040702 77 STLKSLYLHSNSLSG--RLPSSADVRLPNLKELHLWG-NNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLK 153 (797)
Q Consensus 77 ~~L~~L~Ls~N~l~~--~l~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~ 153 (797)
.+++.|+|++|.+++ .+|..+ ..+++|++|+|++ |.+.+.+|..|.++++|++|+|++|+|++..|..|.++++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l-~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSL-ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGG-GGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhH-hCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 355566666666654 455432 3555666666653 555555555555556666666666665555555555555555
Q ss_pred eeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhh
Q 040702 154 WLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQ 233 (797)
Q Consensus 154 ~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~ 233 (797)
+|+|++|.++...+. .+..+++|++|++++|++++..|..+..++.+| +
T Consensus 129 ~L~Ls~N~l~~~~p~-----~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L--------------------------~ 177 (313)
T 1ogq_A 129 TLDFSYNALSGTLPP-----SISSLPNLVGITFDGNRISGAIPDSYGSFSKLF--------------------------T 177 (313)
T ss_dssp EEECCSSEEESCCCG-----GGGGCTTCCEEECCSSCCEEECCGGGGCCCTTC--------------------------C
T ss_pred EEeCCCCccCCcCCh-----HHhcCCCCCeEECcCCcccCcCCHHHhhhhhcC--------------------------c
Confidence 555555555533222 244445555555555555444444444443233 4
Q ss_pred hcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcC
Q 040702 234 LLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFF 313 (797)
Q Consensus 234 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l 313 (797)
+|++++|++++..|..|..+. |++|++++|++++..|..|..+++|+.|+|++|.++..++.+..+++|++|++++|.+
T Consensus 178 ~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l 256 (313)
T 1ogq_A 178 SMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRI 256 (313)
T ss_dssp EEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCC
T ss_pred EEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcc
Confidence 555555555555555555554 6666666666666556566666666666666666654433455556666666666666
Q ss_pred CCCCCccccccccccEEeccCcccccccCccccCCcccceecccCcc
Q 040702 314 TGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNR 360 (797)
Q Consensus 314 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 360 (797)
++..|..|..+++|+.|++++|++++.+|.. ..+++|+.|++++|+
T Consensus 257 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 257 YGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp EECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred cCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 6666666666666666666666666666654 556666666666665
No 273
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=5.6e-33 Score=301.67 Aligned_cols=190 Identities=22% Similarity=0.266 Sum_probs=159.9
Q ss_pred hcCCCccccccccCCcceeec------ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCc------eeEeeeeeecCCe
Q 040702 511 TNRFSENNLIGRGGFGPVYKD------GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRN------LIKIISSCSNDDF 578 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpn------iv~l~~~~~~~~~ 578 (797)
.++|...+.||+|+||.||++ +..||||+++... ...+.+.+|+.++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 368999999999999999974 3789999997432 23467888999999998776 9999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE----------------
Q 040702 579 KALVLEYMPLGSLEKCLYSGN-YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL---------------- 641 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll---------------- 641 (797)
.++||||+ ++++.+++.... ..+++..+..++.||+.||+||| +++|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 567777766543 36899999999999999999999 9999999999999999
Q ss_pred ---cCCCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhcccccc
Q 040702 642 ---DDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLL 710 (797)
Q Consensus 642 ---~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~ 710 (797)
+.++.+||+|||+++..... .....||+.|+|||.+.+..++.++|+|++|+..++.+.+..++
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 239 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF 239 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred ccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCC
Confidence 56789999999999864322 23457999999999999999999999999999886655554443
No 274
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.98 E-value=2.5e-33 Score=310.09 Aligned_cols=228 Identities=18% Similarity=0.194 Sum_probs=168.3
Q ss_pred cCCCc-cccccccCCcceeec-------ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeee--cCCeEEE
Q 040702 512 NRFSE-NNLIGRGGFGPVYKD-------GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCS--NDDFKAL 581 (797)
Q Consensus 512 ~~f~~-~~~lg~G~~g~Vyk~-------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~--~~~~~~l 581 (797)
+.|.. +++||+|+||.||++ +..||||++.... ....+.+|+.++++++||||+++++++. .....|+
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 44655 468999999999975 4679999986432 3467889999999999999999999995 4678999
Q ss_pred EEEccCCCCHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE----cCCCcEEE
Q 040702 582 VLEYMPLGSLEKCLYSG--------NYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL----DDNMVAHL 649 (797)
Q Consensus 582 v~e~~~~g~L~~~l~~~--------~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll----~~~~~~kl 649 (797)
||||+++ +|.+++... ...+++..++.++.||+.||+||| +.+|+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999975 888777521 114899999999999999999999 8999999999999999 67789999
Q ss_pred EeecCCccCCccCc-cccccccccCcccccccccccC-ccchHHHHHHHhhhhhhhhccccccchhhhh-----------
Q 040702 650 SDFGMAKPLLEEDQ-SLTQTQTLATIGYMAPDEIFSG-EMRLKCWVNDSLLISVMIVVDANLLIREEKH----------- 716 (797)
Q Consensus 650 ~DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~~----------- 716 (797)
+|||+|+....... .......+||+.|+|||.+.+. .++.++|+|++|++.+..+.+..++.....+
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987643211 1223456799999999999874 4899999999999986666554443211000
Q ss_pred ----------------------------------------------------hhcccccchhccccCCCCCCCChHHHHH
Q 040702 717 ----------------------------------------------------LMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 717 ----------------------------------------------------~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......++++.|+..||.+|||+.|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0234457899999999999999999886
Q ss_pred h
Q 040702 745 Y 745 (797)
Q Consensus 745 ~ 745 (797)
.
T Consensus 334 h 334 (405)
T 3rgf_A 334 D 334 (405)
T ss_dssp S
T ss_pred C
Confidence 4
No 275
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=1.4e-35 Score=334.45 Aligned_cols=357 Identities=18% Similarity=0.131 Sum_probs=249.0
Q ss_pred CCCCEEEcccCcccccCCcc-ccCCCCCCEEEccCCcCcc----cCCCccccCCCCccEEEccCccccccCCchhh-CCC
Q 040702 53 HNMEWMAFSFNKVVGVVPTT-IFNVSTLKSLYLHSNSLSG----RLPSSADVRLPNLKELHLWGNNFIGTIPSFIF-NAS 126 (797)
Q Consensus 53 ~~L~~L~ls~N~i~~~~p~~-~~~l~~L~~L~Ls~N~l~~----~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~ 126 (797)
++|+.||+++|+++...... +..+++|++|+|++|.++. .++. .+..+++|++|+|++|.+.+..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISS-ALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHH-HHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHH-HHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 46788999999987654443 7778899999999998873 1232 345678899999999988765444443 355
Q ss_pred ----CCCEEEccCCcCcc----cCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCC---
Q 040702 127 ----KLSELGLQKNSFSG----SIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGIL--- 195 (797)
Q Consensus 127 ----~L~~L~L~~N~l~~----~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~--- 195 (797)
+|++|+|++|+|+. ..+.+|.++++|++|+|++|.++......-.-.-+...++|++|++++|+++...
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 68999999998884 4477888888888888888888653221000001233567888888888877643
Q ss_pred -ChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhh-cCCCCCcEEEccCCcCccc----
Q 040702 196 -PRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDL-CRLAALFQLDLGGNKLSGF---- 269 (797)
Q Consensus 196 -~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~---- 269 (797)
+..+..++ +|+.|++++|.+....+..+.. .+ ...++|++|++++|.++..
T Consensus 162 l~~~l~~~~-~L~~L~L~~n~i~~~~~~~l~~----------------------~l~~~~~~L~~L~L~~n~l~~~~~~~ 218 (461)
T 1z7x_W 162 LASVLRAKP-DFKELTVSNNDINEAGVRVLCQ----------------------GLKDSPCQLEALKLESCGVTSDNCRD 218 (461)
T ss_dssp HHHHHHHCT-TCCEEECCSSBCHHHHHHHHHH----------------------HHHHSCCCCCEEECTTSCCBTTHHHH
T ss_pred HHHHHhhCC-CCCEEECcCCCcchHHHHHHHH----------------------HHhcCCCCceEEEccCCCCcHHHHHH
Confidence 34444445 6677777766665433322221 01 1244667777777766643
Q ss_pred CCCCccCCccccccccCCCCCCCC-----CC-CCCCCCcccEEEccCCcCCCC----CCccccccccccEEeccCccccc
Q 040702 270 VPACSGNLTNLRKLYLGSNLLTSI-----PS-TLWNLKDILHLNLSSNFFTGP----LPLKIGNLNVLVQLDLSMNNFSC 339 (797)
Q Consensus 270 ~~~~~~~l~~L~~L~L~~N~l~~l-----p~-~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~ 339 (797)
.+..+..+++|++|++++|.++.. .. .+..+++|++|++++|.++.. ++..+..+++|++|++++|.++.
T Consensus 219 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 298 (461)
T 1z7x_W 219 LCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGD 298 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHH
T ss_pred HHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCch
Confidence 244555667777777777776442 12 223578899999999998853 46667779999999999999986
Q ss_pred ccCccccC-----CcccceecccCccccCC----CChhhhccccCCeeeecCCcCCCCCChhhhc-----cCCCCeEEcc
Q 040702 340 VIPTKIGG-----LKDLQYLFLEYNRLQGS----IPNSIGDLISLKSLNLSNNNLSGTIPISLEK-----LLDLKDINVS 405 (797)
Q Consensus 340 ~~~~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~l~ 405 (797)
..+..+.. .++|++|++++|.+++. ++..+..+++|++|+|++|.+++..+..+.. .++|+.|+++
T Consensus 299 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 378 (461)
T 1z7x_W 299 EGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLA 378 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECC
Confidence 54444432 36999999999999865 4667788899999999999998776666654 6799999999
Q ss_pred CCcCcc----cCCC-CCCCCCCCcccccCCccc
Q 040702 406 FNRLEG----EIPR-EGPFRNLSAESFKGNELL 433 (797)
Q Consensus 406 ~N~l~~----~~p~-~~~~~~l~~~~~~~n~~~ 433 (797)
+|++++ .+|. ....+.++.+++.+|+..
T Consensus 379 ~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 379 DCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp TSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred CCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 999985 3443 234678888999999753
No 276
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.98 E-value=1.5e-33 Score=304.48 Aligned_cols=228 Identities=19% Similarity=0.208 Sum_probs=183.8
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC-cchhHHHHHHH-hhhccCCceeEeeeeeecCCeEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG-AFKSFDIECGM-MKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~-~~~~~~~E~~~-l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
.++|+..+.||+|+||.||++ ++.||||+++..... ...++..|..+ ++.++||||+++++++..++..|+||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 468889999999999999984 689999999765322 23455566665 77789999999999999999999999
Q ss_pred EccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 584 EYMPLGSLEKCLYS---GNYILDIFQGLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 584 e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~al~yLH~~~~~-~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
||+++ +|.+++.. ....+++..+..++.||+.||+||| +. +|+||||||+||+++.++.+||+|||+++...
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 99975 99888764 3446899999999999999999999 76 99999999999999999999999999998653
Q ss_pred ccCccccccccccCcccccccccc----cCccchHHHHHHHhhhhhhhhccccccchh-------------------hhh
Q 040702 660 EEDQSLTQTQTLATIGYMAPDEIF----SGEMRLKCWVNDSLLISVMIVVDANLLIRE-------------------EKH 716 (797)
Q Consensus 660 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~-------------------~~~ 716 (797)
.. .......||+.|+|||.+. ...++.++|+|++|+..++.+....++... ...
T Consensus 206 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (340)
T 3an0_A 206 DS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADK 282 (340)
T ss_dssp CH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGG
T ss_pred cc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCccc
Confidence 22 1223357999999999864 346899999999999986665544433210 011
Q ss_pred hhcccccchhccccCCCCCCCChHHHHHh
Q 040702 717 LMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 717 ~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
....+.++++.|+..||++||++.|+++.
T Consensus 283 ~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 283 FSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 23456789999999999999999998764
No 277
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.98 E-value=1.1e-33 Score=307.85 Aligned_cols=224 Identities=21% Similarity=0.265 Sum_probs=167.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecC------C
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSND------D 577 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~------~ 577 (797)
.++|...+.||+|+||.||++ ++.||||++...... ..+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 478999999999999999985 689999998654322 346788999999999999999999998654 5
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 578 FKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 578 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
..|+||||+ +++|.+++... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 689999999 67999988764 4899999999999999999999 99999999999999999999999999999986
Q ss_pred CCccCccccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhhh---------------------
Q 040702 658 LLEEDQSLTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREEK--------------------- 715 (797)
Q Consensus 658 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~--------------------- 715 (797)
... ......||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..++.....
T Consensus 182 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 182 TAD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred ccc-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 432 2344679999999999877 6789999999999988666555443322110
Q ss_pred --------------------------hhhcccccchhccccCCCCCCCChHHHHHh
Q 040702 716 --------------------------HLMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 716 --------------------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
.......++++.|+..||.+||++.|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 012235678999999999999999998864
No 278
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.98 E-value=1e-32 Score=300.43 Aligned_cols=234 Identities=20% Similarity=0.235 Sum_probs=175.1
Q ss_pred HHHHHHhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecCC--
Q 040702 505 LELFQATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSNDD-- 577 (797)
Q Consensus 505 ~~l~~~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~-- 577 (797)
.+.....++|...+.||+|+||.||++ +..||||++.... .....+.+|++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445667789999999999999999974 6889999986543 33456778888899999999999999986543
Q ss_pred -----eEEEEEEccCCCCHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC-CCcEE
Q 040702 578 -----FKALVLEYMPLGSLEKCLY---SGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD-NMVAH 648 (797)
Q Consensus 578 -----~~~lv~e~~~~g~L~~~l~---~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~-~~~~k 648 (797)
..++||||+++ ++.+.+. .....+++..+..++.|++.|+.||| .++++|+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEE
Confidence 27899999986 5554443 23335889999999999999999999 33679999999999999996 89999
Q ss_pred EEeecCCccCCccCccccccccccCcccccccccccCc-cchHHHHHHHhhhhhhhhccccccchhhhh-----------
Q 040702 649 LSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGE-MRLKCWVNDSLLISVMIVVDANLLIREEKH----------- 716 (797)
Q Consensus 649 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~dv~s~~~~~~~~~~~~~~~~~~~~~----------- 716 (797)
|+|||+++...... ......||+.|+|||.+.+.. ++.++|+|++|+..+..+.+..++......
T Consensus 173 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 249 (360)
T 3e3p_A 173 LCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249 (360)
T ss_dssp ECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred EeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcC
Confidence 99999998764332 233467899999999987655 899999999999986665554443221100
Q ss_pred -------------------------------------hhcccccchhccccCCCCCCCChHHHHH
Q 040702 717 -------------------------------------LMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 717 -------------------------------------~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
....+.++++.|++.||.+||++.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1234668999999999999999988875
No 279
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.98 E-value=6.2e-33 Score=307.85 Aligned_cols=223 Identities=23% Similarity=0.347 Sum_probs=177.8
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCceeEeeeeeecC----C--eE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNLIKIISSCSND----D--FK 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~----~--~~ 579 (797)
..+|...+.||+|+||.||++ ++.||||++.... ....+|++++++++|||||++++++... + ..
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 357899999999999999985 6889999987542 2344799999999999999999988542 2 36
Q ss_pred EEEEEccCCCCHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCC-CcEEEEeecCC
Q 040702 580 ALVLEYMPLGSLEKCLY---SGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN-MVAHLSDFGMA 655 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~---~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~-~~~kl~DFGla 655 (797)
++||||+++ ++.+.+. .....+++..++.++.||++||+||| +.+|+||||||+|||++.+ +.+||+|||+|
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 799999976 6666554 23346899999999999999999999 9999999999999999955 67899999999
Q ss_pred ccCCccCccccccccccCcccccccccccC-ccchHHHHHHHhhhhhhhhccccccchhh--------------------
Q 040702 656 KPLLEEDQSLTQTQTLATIGYMAPDEIFSG-EMRLKCWVNDSLLISVMIVVDANLLIREE-------------------- 714 (797)
Q Consensus 656 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------------- 714 (797)
+...... ......||+.|+|||.+.+. .++.++|+|++|++.++.+.+..++....
T Consensus 205 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 205 KQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp EECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred hhcccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 8654322 22346799999999998765 68999999999999866665554432211
Q ss_pred -------------------------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 715 -------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 715 -------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
........+++++|+..||.+||++.|+++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 011234668899999999999999999876
No 280
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.98 E-value=8.8e-33 Score=295.56 Aligned_cols=227 Identities=21% Similarity=0.246 Sum_probs=189.6
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC------cchhHHHHHHHhhhcc--CCceeEeeeeeecC
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG------AFKSFDIECGMMKRIR--HRNLIKIISSCSND 576 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~--Hpniv~l~~~~~~~ 576 (797)
..++|...+.||+|+||.||++ ++.||||+++..... ..+.+.+|+.++++++ ||||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 4578999999999999999985 689999999866432 2356788999999996 59999999999999
Q ss_pred CeEEEEEEccCC-CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEc-CCCcEEEEeecC
Q 040702 577 DFKALVLEYMPL-GSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-DNMVAHLSDFGM 654 (797)
Q Consensus 577 ~~~~lv~e~~~~-g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~-~~~~~kl~DFGl 654 (797)
+..++||||+.+ ++|.+++.... .+++..++.++.|+++||+||| +.+|+||||||+||+++ .++.+||+|||+
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred CcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 999999999976 89999987654 4899999999999999999999 99999999999999999 789999999999
Q ss_pred CccCCccCccccccccccCcccccccccccCcc-chHHHHHHHhhhhhhhhccccccchhhh----------hhhccccc
Q 040702 655 AKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEM-RLKCWVNDSLLISVMIVVDANLLIREEK----------HLMTKEQP 723 (797)
Q Consensus 655 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~dv~s~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 723 (797)
++..... ......||+.|+|||.+.+..+ +.++|+|++|+..++.+.+..++..... .....+.+
T Consensus 197 ~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 272 (320)
T 3a99_A 197 GALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 272 (320)
T ss_dssp CEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHH
T ss_pred ccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcccccccccCCHHHHH
Confidence 9865432 2234579999999999887776 7889999999998666655544433221 22345678
Q ss_pred chhccccCCCCCCCChHHHHH
Q 040702 724 MVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 724 l~~~cl~~dp~~RPs~~~i~~ 744 (797)
+++.|++.||++||++.|+++
T Consensus 273 li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 273 LIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp HHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHccCChhhCcCHHHHhc
Confidence 999999999999999988764
No 281
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.98 E-value=9.3e-33 Score=297.79 Aligned_cols=188 Identities=20% Similarity=0.282 Sum_probs=160.7
Q ss_pred hcCCCccccccccCCcceeec------ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCc------eeEeeeeeecCCe
Q 040702 511 TNRFSENNLIGRGGFGPVYKD------GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRN------LIKIISSCSNDDF 578 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpn------iv~l~~~~~~~~~ 578 (797)
.++|+..+.||+|+||.||++ ++.||||+++... ...+.+.+|+++++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 368999999999999999974 5889999986432 23467889999999997765 9999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC--------------
Q 040702 579 KALVLEYMPLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD-------------- 643 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~-------------- 643 (797)
.++||||+ +++|.+++..... .+++..+..++.|+++||+||| +++|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 7899999977653 5889999999999999999999 899999999999999987
Q ss_pred -----CCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhcccc
Q 040702 644 -----NMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDAN 708 (797)
Q Consensus 644 -----~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~ 708 (797)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++|+|++|+..++.+.+..
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 232 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFT 232 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred cccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCC
Confidence 668999999999864321 234579999999999999899999999999998865554433
No 282
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.98 E-value=1.3e-32 Score=301.73 Aligned_cols=192 Identities=24% Similarity=0.314 Sum_probs=160.3
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhcc-CC-----ceeEeeeeeecCCe
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIR-HR-----NLIKIISSCSNDDF 578 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-Hp-----niv~l~~~~~~~~~ 578 (797)
..++|...+.||+|+||.||++ ++.||||+++... ....++..|+++++.++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 3578999999999999999985 6889999997432 22456778999988885 44 49999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEc--CCCcEEEEeecCC
Q 040702 579 KALVLEYMPLGSLEKCLYSGN-YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD--DNMVAHLSDFGMA 655 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~--~~~~~kl~DFGla 655 (797)
.|+||||++ |+|.+++.... ..+++..+..++.|++.||.|||. +..+|+||||||+|||++ .++.+||+|||+|
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999996 59999987754 358999999999999999999992 246899999999999994 5788999999999
Q ss_pred ccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccc
Q 040702 656 KPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANL 709 (797)
Q Consensus 656 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~ 709 (797)
+..... .....||+.|+|||.+.+..++.++|+|++|+..++.+.+..+
T Consensus 209 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p 257 (382)
T 2vx3_A 209 CQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 257 (382)
T ss_dssp EETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred eecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 865322 2346799999999999999999999999999988665554443
No 283
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.98 E-value=9.5e-33 Score=294.47 Aligned_cols=231 Identities=20% Similarity=0.251 Sum_probs=182.2
Q ss_pred HHhcCCCccccccccCCcceeec----ceEEEEEEEEeccCC--cchhHHHHHHHhhhcc--CCceeEeeeeeecCCeEE
Q 040702 509 QATNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIR--HRNLIKIISSCSNDDFKA 580 (797)
Q Consensus 509 ~~~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~--Hpniv~l~~~~~~~~~~~ 580 (797)
...++|...+.||+|+||.||++ ++.||||++...... ..+.+.+|++++++++ ||||+++++++..++..+
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 34578999999999999999985 688999999765332 3467889999999997 599999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCc
Q 040702 581 LVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~ 660 (797)
+||| +.+++|.+++.... .+++..+..++.|+++||.||| +.+|+||||||+||++++ +.+||+|||+++....
T Consensus 105 lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred EEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 9999 55789999998765 4899999999999999999999 899999999999999975 8999999999987644
Q ss_pred cCccccccccccCccccccccccc-----------CccchHHHHHHHhhhhhhhhccccccchh----------------
Q 040702 661 EDQSLTQTQTLATIGYMAPDEIFS-----------GEMRLKCWVNDSLLISVMIVVDANLLIRE---------------- 713 (797)
Q Consensus 661 ~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~dv~s~~~~~~~~~~~~~~~~~~---------------- 713 (797)
...........||+.|+|||.+.. ..++.++|+|++|+..+..+.+..++...
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 258 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 258 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccc
Confidence 333223345679999999998865 46889999999999886655544433221
Q ss_pred ---hhhhhcccccchhccccCCCCCCCChHHHHHh
Q 040702 714 ---EKHLMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 714 ---~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
+......+.++++.|++.||.+||++.|+++.
T Consensus 259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 259 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 01112346788999999999999999998864
No 284
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.98 E-value=6.2e-33 Score=303.04 Aligned_cols=223 Identities=20% Similarity=0.277 Sum_probs=181.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCCeE----
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFK---- 579 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~---- 579 (797)
.++|...+.||+|+||.||++ ++.||||++...... ..+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999985 689999999765332 246788999999999999999999999877654
Q ss_pred --EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 580 --ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 580 --~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
|+||||+. |+|.+++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 588887743 3899999999999999999999 89999999999999999999999999999985
Q ss_pred CCccCccccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhh----------------------
Q 040702 658 LLEEDQSLTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREE---------------------- 714 (797)
Q Consensus 658 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~---------------------- 714 (797)
... ......||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..++....
T Consensus 194 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 194 ADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred ccc-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence 432 2234678999999999887 678999999999998866555444332211
Q ss_pred -------------------------hhhhcccccchhccccCCCCCCCChHHHHHh
Q 040702 715 -------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 715 -------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
......+.++++.|++.||++||++.|+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 1123456789999999999999999998763
No 285
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.98 E-value=7e-33 Score=295.34 Aligned_cols=231 Identities=23% Similarity=0.262 Sum_probs=181.4
Q ss_pred HHHHHhcCCCccccccccCCcceeec-----ceEEEEEEEEeccC------CcchhHHHHHHHhhhc----cCCceeEee
Q 040702 506 ELFQATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG------GAFKSFDIECGMMKRI----RHRNLIKII 570 (797)
Q Consensus 506 ~l~~~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l----~Hpniv~l~ 570 (797)
+.....++|...+.||+|+||.||++ ++.||||+++.... .....+.+|+.++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 34445678999999999999999985 57899999975532 1234567799999999 899999999
Q ss_pred eeeecCCeEEEEEEc-cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEc-CCCcEE
Q 040702 571 SSCSNDDFKALVLEY-MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLD-DNMVAH 648 (797)
Q Consensus 571 ~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~-~~~~~k 648 (797)
+++...+..++|||| +.+++|.+++.... .+++..++.++.|+++||+||| +.+|+||||||+||+++ .++.+|
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEE
Confidence 999999999999999 78999999997754 4899999999999999999999 89999999999999999 889999
Q ss_pred EEeecCCccCCccCccccccccccCcccccccccccCcc-chHHHHHHHhhhhhhhhccccccchhh----------hhh
Q 040702 649 LSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEM-RLKCWVNDSLLISVMIVVDANLLIREE----------KHL 717 (797)
Q Consensus 649 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~dv~s~~~~~~~~~~~~~~~~~~~----------~~~ 717 (797)
|+|||+++..... ......||..|+|||.+.+..+ +.++|+|++|+..+..+.+..++.... ...
T Consensus 181 l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 256 (312)
T 2iwi_A 181 LIDFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHV 256 (312)
T ss_dssp ECCCSSCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCCCCTTS
T ss_pred EEEcchhhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhhccCCcccC
Confidence 9999999866432 2234579999999999887766 469999999999866665554443221 123
Q ss_pred hcccccchhccccCCCCCCCChHHHHH
Q 040702 718 MTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 718 ~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
...+.++++.|++.||++||++.|+++
T Consensus 257 ~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 257 SPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 345678999999999999999999876
No 286
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.98 E-value=1e-32 Score=290.42 Aligned_cols=228 Identities=21% Similarity=0.316 Sum_probs=187.0
Q ss_pred HhcCCCccccccccCCcceeec-----ceEEEEEEEEeccC--CcchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEE
Q 040702 510 ATNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG--GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALV 582 (797)
Q Consensus 510 ~~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv 582 (797)
..++|...+.||+|+||.||++ ++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3468999999999999999984 68899999976532 3456789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCC---CcEEEEeecCCccCC
Q 040702 583 LEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN---MVAHLSDFGMAKPLL 659 (797)
Q Consensus 583 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~---~~~kl~DFGla~~~~ 659 (797)
|||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.+ +.+||+|||+++...
T Consensus 100 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999887654 4899999999999999999999 8999999999999999754 479999999998654
Q ss_pred ccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhhhc
Q 040702 660 EEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHLMT 719 (797)
Q Consensus 660 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~~~ 719 (797)
... ......||+.|+|||.+. +.++.++|+|++|+..+..+.+..++.... .....
T Consensus 176 ~~~---~~~~~~~~~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (287)
T 2wei_A 176 QNT---KMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD 251 (287)
T ss_dssp CCS---SCSCHHHHHTTCCHHHHT-TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCH
T ss_pred CCC---ccccccCcccccChHHhc-CCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCH
Confidence 322 223346899999999875 458999999999998755554433322110 11233
Q ss_pred ccccchhccccCCCCCCCChHHHHHh
Q 040702 720 KEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 720 ~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
.+.++++.|+..||++||++.|+++.
T Consensus 252 ~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 252 DAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHcccChhhCcCHHHHhcC
Confidence 56789999999999999999998873
No 287
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=1.9e-32 Score=295.00 Aligned_cols=224 Identities=19% Similarity=0.248 Sum_probs=162.5
Q ss_pred hcCCCcc-ccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHH-HHhhhccCCceeEeeeeeec----CCeE
Q 040702 511 TNRFSEN-NLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIEC-GMMKRIRHRNLIKIISSCSN----DDFK 579 (797)
Q Consensus 511 ~~~f~~~-~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~-~~l~~l~Hpniv~l~~~~~~----~~~~ 579 (797)
.++|... +.||+|+||.||++ ++.||||++... ....+|+ ..++.++||||+++++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 5788885 46999999999975 689999998643 2233333 34566789999999999876 4458
Q ss_pred EEEEEccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC---CCcEEEEeecCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMA 655 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~---~~~~kl~DFGla 655 (797)
++||||+++|+|.+++..... .+++..++.++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 999999999999999987643 6899999999999999999999 899999999999999976 455999999999
Q ss_pred ccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh---------------------
Q 040702 656 KPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------- 714 (797)
Q Consensus 656 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------- 714 (797)
+..... ......||+.|+|||.+....++.++|+|++|+..+..+.+..++....
T Consensus 179 ~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (336)
T 3fhr_A 179 KETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254 (336)
T ss_dssp EEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCT
T ss_pred eecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCc
Confidence 865322 2234578999999999988999999999999998866555444332211
Q ss_pred ---hhhhcccccchhccccCCCCCCCChHHHHHhH
Q 040702 715 ---KHLMTKEQPMVRMGTDLSLGQFPASYSISKYL 746 (797)
Q Consensus 715 ---~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l 746 (797)
......+.++++.|++.||++||++.|+++.-
T Consensus 255 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 255 PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 12234567899999999999999999998753
No 288
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=1.5e-32 Score=294.90 Aligned_cols=228 Identities=20% Similarity=0.220 Sum_probs=165.0
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC-CcchhHHHHHH-HhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-GAFKSFDIECG-MMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-~~~~~~~~E~~-~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
.++|...+.||+|+||.||++ ++.||||+++.... ....++..|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 368999999999999999974 68999999986532 22345556665 677789999999999999999999999
Q ss_pred EccCCCCHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCceEEcCCCcEEEEeecCCccC
Q 040702 584 EYMPLGSLEKCLYS----GNYILDIFQGLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPL 658 (797)
Q Consensus 584 e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~al~yLH~~~~~-~ivHrDlkp~NIll~~~~~~kl~DFGla~~~ 658 (797)
||+++ +|.+++.. ....+++..+..++.|++.||.||| +. +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99985 88777753 2335899999999999999999999 87 9999999999999999999999999999865
Q ss_pred CccCccccccccccCccccccccc----ccCccchHHHHHHHhhhhhhhhccccccchhh--------------------
Q 040702 659 LEEDQSLTQTQTLATIGYMAPDEI----FSGEMRLKCWVNDSLLISVMIVVDANLLIREE-------------------- 714 (797)
Q Consensus 659 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------------------- 714 (797)
.... ......||+.|+|||.+ .+..++.++|+|++|+..+..+.+..++....
T Consensus 177 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNS 253 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCC
T ss_pred cccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCc
Confidence 4322 22334799999999998 45668999999999998866555443332211
Q ss_pred --hhhhcccccchhccccCCCCCCCChHHHHHh
Q 040702 715 --KHLMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 715 --~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
......+.++++.|++.||++||++.++++.
T Consensus 254 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0123346688999999999999999999774
No 289
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=1.7e-32 Score=300.18 Aligned_cols=225 Identities=17% Similarity=0.232 Sum_probs=183.6
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHhhhcc-----------CCceeEeeeeee
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIR-----------HRNLIKIISSCS 574 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----------Hpniv~l~~~~~ 574 (797)
.++|...+.||+|+||.||++ ++.||||++.... ...+.+.+|+.++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 368999999999999999975 6899999987432 22467888999999886 899999999987
Q ss_pred cCC----eEEEEEEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCceEEc------
Q 040702 575 NDD----FKALVLEYMPLGSLEKCLYSGN-YILDIFQGLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLD------ 642 (797)
Q Consensus 575 ~~~----~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~al~yLH~~~~~-~ivHrDlkp~NIll~------ 642 (797)
..+ ..++||||+ +++|.+++.... ..+++..+..++.||+.||+||| ++ +|+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 654 789999999 889999997643 35899999999999999999999 87 999999999999994
Q ss_pred CCCcEEEEeecCCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh--------
Q 040702 643 DNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE-------- 714 (797)
Q Consensus 643 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-------- 714 (797)
..+.+||+|||+++..... .....||+.|+|||.+.+..++.++|+|++|+..+..+.+..++....
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4458999999999865322 234579999999999999999999999999999866665544433211
Q ss_pred --------------------------------------------------------hhhhcccccchhccccCCCCCCCC
Q 040702 715 --------------------------------------------------------KHLMTKEQPMVRMGTDLSLGQFPA 738 (797)
Q Consensus 715 --------------------------------------------------------~~~~~~~~~l~~~cl~~dp~~RPs 738 (797)
......+.++++.|++.||++||+
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 122335568999999999999999
Q ss_pred hHHHHHh
Q 040702 739 SYSISKY 745 (797)
Q Consensus 739 ~~~i~~~ 745 (797)
+.|+++.
T Consensus 328 ~~ell~h 334 (373)
T 1q8y_A 328 AGGLVNH 334 (373)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9998863
No 290
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=1.6e-32 Score=305.78 Aligned_cols=226 Identities=22% Similarity=0.313 Sum_probs=171.6
Q ss_pred cCCCccccccccCCcceee----cceEEEEEEEEeccCCcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEEEEEEcc
Q 040702 512 NRFSENNLIGRGGFGPVYK----DGMEVAIKVFNLQYGGAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKALVLEYM 586 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk----~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lv~e~~ 586 (797)
+.|...+.||+|+||+||. .++.||||++.... .+.+.+|+++++++ +||||+++++++.+++..|+||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 3455568899999999974 36899999987542 35678899999987 8999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCC------CCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCC-------------CcE
Q 040702 587 PLGSLEKCLYSGNYI------LDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDN-------------MVA 647 (797)
Q Consensus 587 ~~g~L~~~l~~~~~~------l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~-------------~~~ 647 (797)
. |+|.+++...... .++..++.++.||+.||+||| +.+|+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 6999999865431 122345679999999999999 8999999999999999754 489
Q ss_pred EEEeecCCccCCccCccc--cccccccCccccccccccc-------CccchHHHHHHHhhhhhhhhc-cccccchh-h--
Q 040702 648 HLSDFGMAKPLLEEDQSL--TQTQTLATIGYMAPDEIFS-------GEMRLKCWVNDSLLISVMIVV-DANLLIRE-E-- 714 (797)
Q Consensus 648 kl~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~dv~s~~~~~~~~~~-~~~~~~~~-~-- 714 (797)
||+|||+++......... ......||+.|+|||.+.+ ..++.++|+|++|+..++.+. +..++... .
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 999999998764432211 1234679999999999865 668999999999999866654 33333211 0
Q ss_pred ------------------hhhhcccccchhccccCCCCCCCChHHHHH
Q 040702 715 ------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 715 ------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
......+.++++.|++.||.+||++.++++
T Consensus 248 ~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 011235678999999999999999999876
No 291
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=1.5e-32 Score=298.09 Aligned_cols=223 Identities=20% Similarity=0.280 Sum_probs=180.2
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC--cchhHHHHHHHhhhccCCceeEeeeeeecCCe-----
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG--AFKSFDIECGMMKRIRHRNLIKIISSCSNDDF----- 578 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~----- 578 (797)
.++|...+.||+|+||.||++ ++.||||++...... ..+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 367999999999999999985 689999999754322 24578899999999999999999999987654
Q ss_pred -EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 579 -KALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 579 -~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
.|+||||++ |+|.+++.. .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588877643 3899999999999999999999 89999999999999999999999999999986
Q ss_pred CCccCccccccccccCccccccccccc-CccchHHHHHHHhhhhhhhhccccccchhh----------------------
Q 040702 658 LLEEDQSLTQTQTLATIGYMAPDEIFS-GEMRLKCWVNDSLLISVMIVVDANLLIREE---------------------- 714 (797)
Q Consensus 658 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~---------------------- 714 (797)
.... .....||+.|+|||.+.+ ..++.++|+|++|+..+..+.+..++....
T Consensus 176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 4321 234578999999999876 678999999999998866555444332211
Q ss_pred -------------------------hhhhcccccchhccccCCCCCCCChHHHHHh
Q 040702 715 -------------------------KHLMTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 715 -------------------------~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
......+.++++.|+..||++||++.++++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0123346788999999999999999998763
No 292
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=5e-32 Score=309.97 Aligned_cols=237 Identities=23% Similarity=0.263 Sum_probs=185.9
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEecc-CCcchhHHHHHHHhhhccCCceeEeeeeeec------CCe
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQY-GGAFKSFDIECGMMKRIRHRNLIKIISSCSN------DDF 578 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~------~~~ 578 (797)
.++|...+.||+|+||.||++ ++.||||+++... ....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 378999999999999999974 6889999987542 2234678899999999999999999998765 667
Q ss_pred EEEEEEccCCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCc---EEEEeec
Q 040702 579 KALVLEYMPLGSLEKCLYSGNY--ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMV---AHLSDFG 653 (797)
Q Consensus 579 ~~lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~---~kl~DFG 653 (797)
.|+||||+++|+|.+++..... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 8999999999999999986442 5888899999999999999999 899999999999999997664 9999999
Q ss_pred CCccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccch---------------------
Q 040702 654 MAKPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIR--------------------- 712 (797)
Q Consensus 654 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~--------------------- 712 (797)
+++...... ......||+.|+|||.+.++.++.++|+|++|+..+..+.+..++..
T Consensus 170 ~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 170 YAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred ccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence 998764332 23446799999999999999999999999999988666555433311
Q ss_pred -------------------hhhhhhcccccchhccccCCCCCCCChHHHHH--hHHHHHHHh
Q 040702 713 -------------------EEKHLMTKEQPMVRMGTDLSLGQFPASYSISK--YLVYIRELE 753 (797)
Q Consensus 713 -------------------~~~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~--~l~~i~~~~ 753 (797)
........+.++++.|+..||++||++.++++ .++.+..+.
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 01112345678899999999999999988543 444444443
No 293
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=4e-32 Score=290.26 Aligned_cols=228 Identities=19% Similarity=0.185 Sum_probs=167.3
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccCC-c-chhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG-A-FKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~-~-~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
.++|+..+.||+|+||.||++ ++.||||++...... . .+.+..+..+++.++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 468999999999999999985 689999999765322 1 223444555678889999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCceEEcCCCcEEEEeecCCccCCccC
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSV-PIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEED 662 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~-~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~ 662 (797)
||+ ++.+..+.......+++..+..++.|+++||.||| +. +|+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 55776666554446899999999999999999999 75 99999999999999999999999999997654322
Q ss_pred ccccccccccCcccccccccc-----cCccchHHHHHHHhhhhhhhhccccccchhh--------------------hhh
Q 040702 663 QSLTQTQTLATIGYMAPDEIF-----SGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------KHL 717 (797)
Q Consensus 663 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------~~~ 717 (797)
......||+.|+|||.+. ...++.++|+|++|+..+..+....++.... ...
T Consensus 180 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (318)
T 2dyl_A 180 ---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGF 256 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCC
T ss_pred ---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCC
Confidence 223457999999999984 4568899999999999866555444332210 012
Q ss_pred hcccccchhccccCCCCCCCChHHHHHh
Q 040702 718 MTKEQPMVRMGTDLSLGQFPASYSISKY 745 (797)
Q Consensus 718 ~~~~~~l~~~cl~~dp~~RPs~~~i~~~ 745 (797)
...+.++++.|++.||.+||++.++++.
T Consensus 257 ~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 257 SGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 3356788999999999999999998873
No 294
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=5.4e-31 Score=285.83 Aligned_cols=278 Identities=17% Similarity=0.181 Sum_probs=149.3
Q ss_pred CCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCcccc
Q 040702 20 PSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADV 99 (797)
Q Consensus 20 l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~ 99 (797)
++.....|+++|. ++++|..+. ++|++|++++|+++++.+..|.++++|++|+|++|+++ .++...|.
T Consensus 30 C~~~~~c~~~~~~---------l~~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~ 97 (353)
T 2z80_A 30 CDRNGICKGSSGS---------LNSIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIEEDSFS 97 (353)
T ss_dssp ECTTSEEECCSTT---------CSSCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC-EECTTTTT
T ss_pred CCCCeEeeCCCCC---------ccccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccC-ccCHhhcC
Confidence 3444445666555 334444433 25566666666665555555556666666666666655 44444445
Q ss_pred CCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCC-ccccCCCCCCeeeccCc-cCcCCCCCccccccCCC
Q 040702 100 RLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIP-NTFGNLRNLKWLGLNDN-YLTSSTPELSSLSSLSN 177 (797)
Q Consensus 100 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~f~~l~~L~~L~L~~N-~l~~~~~~~~~~~~l~~ 177 (797)
++++|++|+|++|++++..+..|.++++|++|+|++|+|+.+.+ ..|.++++|++|++++| .++.+++. .|.+
T Consensus 98 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~-----~~~~ 172 (353)
T 2z80_A 98 SLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRK-----DFAG 172 (353)
T ss_dssp TCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTT-----TTTT
T ss_pred CCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHH-----HccC
Confidence 55556666666665554433445555555566665555554444 45555555555555555 34444432 2455
Q ss_pred CCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCc
Q 040702 178 CKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALF 257 (797)
Q Consensus 178 l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 257 (797)
+++|+.|++++|++.+..|..|..++ +|+.|++++|.+. ...+..+..+++|+
T Consensus 173 l~~L~~L~l~~n~l~~~~~~~l~~l~-~L~~L~l~~n~l~--------------------------~~~~~~~~~~~~L~ 225 (353)
T 2z80_A 173 LTFLEELEIDASDLQSYEPKSLKSIQ-NVSHLILHMKQHI--------------------------LLLEIFVDVTSSVE 225 (353)
T ss_dssp CCEEEEEEEEETTCCEECTTTTTTCS-EEEEEEEECSCST--------------------------THHHHHHHHTTTEE
T ss_pred CCCCCEEECCCCCcCccCHHHHhccc-cCCeecCCCCccc--------------------------cchhhhhhhccccc
Confidence 55555555555555555555555544 4555555555443 22222233345555
Q ss_pred EEEccCCcCcccCCCCcc---CCccccccccCCCCCC-----CCCCCCCCCCcccEEEccCCcCCCCCCccccccccccE
Q 040702 258 QLDLGGNKLSGFVPACSG---NLTNLRKLYLGSNLLT-----SIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQ 329 (797)
Q Consensus 258 ~L~Ls~N~l~~~~~~~~~---~l~~L~~L~L~~N~l~-----~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 329 (797)
.|++++|.+++..+..+. ....++.++|++|.++ .+|..+..+++|+.|++++|+++...+..|..+++|++
T Consensus 226 ~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~ 305 (353)
T 2z80_A 226 CLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQK 305 (353)
T ss_dssp EEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred EEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCE
Confidence 555555555543332221 2233444444444442 35666667777777777777777544444577777778
Q ss_pred EeccCccccccc
Q 040702 330 LDLSMNNFSCVI 341 (797)
Q Consensus 330 L~Ls~N~l~~~~ 341 (797)
|++++|++.+..
T Consensus 306 L~L~~N~~~~~~ 317 (353)
T 2z80_A 306 IWLHTNPWDCSC 317 (353)
T ss_dssp EECCSSCBCCCH
T ss_pred EEeeCCCccCcC
Confidence 888887776543
No 295
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.6e-31 Score=314.89 Aligned_cols=224 Identities=20% Similarity=0.257 Sum_probs=178.7
Q ss_pred cCCCccccccccCCcceeec------ceEEEEEEEEeccC-CcchhHHHHHHHhhhccCCceeEeeeeeecCCe-----E
Q 040702 512 NRFSENNLIGRGGFGPVYKD------GMEVAIKVFNLQYG-GAFKSFDIECGMMKRIRHRNLIKIISSCSNDDF-----K 579 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-----~ 579 (797)
++|.+.+.||+|+||.||++ ++.||||++..... .....+.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 68999999999999999974 58899998864422 234578899999999999999999999987655 7
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLL 659 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~ 659 (797)
|+||||+++++|.+++.. .+++..++.++.||++||.||| +++|+||||||+||+++.+ .+||+|||+++...
T Consensus 160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 999999999999987755 4899999999999999999999 8999999999999999975 99999999998653
Q ss_pred ccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccch----------hhhhhhcccccchhccc
Q 040702 660 EEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIR----------EEKHLMTKEQPMVRMGT 729 (797)
Q Consensus 660 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~~cl 729 (797)
.. ....||+.|||||.+.++ ++.++|+|++|++.+..+.+..++.. ........+.++++.|+
T Consensus 233 ~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 305 (681)
T 2pzi_A 233 SF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRAI 305 (681)
T ss_dssp CC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCTTCHHHHHCHHHHHHHHHHT
T ss_pred cC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccccccccccccCHHHHHHHhhhc
Confidence 22 345799999999988665 48999999999987655543322211 11112345678999999
Q ss_pred cCCCCCCCCh-HHHHHhHHHH
Q 040702 730 DLSLGQFPAS-YSISKYLVYI 749 (797)
Q Consensus 730 ~~dp~~RPs~-~~i~~~l~~i 749 (797)
+.||.+||+. .++...+..+
T Consensus 306 ~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 306 DPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp CSSGGGSCSSHHHHHHHHHHH
T ss_pred cCChhhCCCHHHHHHHHHHHH
Confidence 9999999964 5565555544
No 296
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=6.5e-32 Score=291.03 Aligned_cols=178 Identities=19% Similarity=0.211 Sum_probs=145.4
Q ss_pred hcCCCccccccccCCcceeec---ceEEEEEEEEeccCC--------cchhHHHHHHHhhhcc---------CCceeEe-
Q 040702 511 TNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGG--------AFKSFDIECGMMKRIR---------HRNLIKI- 569 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~--------~~~~~~~E~~~l~~l~---------Hpniv~l- 569 (797)
.++|+..+.||+|+||.||++ ++.||||+++..... ..+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 467999999999999999985 689999999876321 2367889999999986 5555554
Q ss_pred ----------------eeeeec-------------CCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Q 040702 570 ----------------ISSCSN-------------DDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEY 620 (797)
Q Consensus 570 ----------------~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~y 620 (797)
++++.+ ++..|+||||+++|++.+.+.. ..+++..++.++.||+.||+|
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHH
Confidence 444443 6789999999999976665544 347999999999999999999
Q ss_pred HHccCCCCeEEcCCCCCceEEcCCC--------------------cEEEEeecCCccCCccCccccccccccCccccccc
Q 040702 621 LHFGYSVPIIHCDLKPSNVLLDDNM--------------------VAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPD 680 (797)
Q Consensus 621 LH~~~~~~ivHrDlkp~NIll~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE 680 (797)
||+ +++|+||||||+|||++.++ .+||+|||+|+.... ...+||+.|||||
T Consensus 177 lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aPE 247 (336)
T 2vuw_A 177 AEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDED 247 (336)
T ss_dssp HHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCSG
T ss_pred HHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccChh
Confidence 992 36899999999999999887 899999999986532 2347999999999
Q ss_pred ccccCccchHHHHHHHhhhh
Q 040702 681 EIFSGEMRLKCWVNDSLLIS 700 (797)
Q Consensus 681 ~~~~~~~~~~~dv~s~~~~~ 700 (797)
.+.+.. +.++|+|+++...
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~ 266 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKE 266 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHH
T ss_pred hhcCCC-ccceehhhhhCCC
Confidence 987655 8999999987663
No 297
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=5.3e-31 Score=285.93 Aligned_cols=280 Identities=20% Similarity=0.181 Sum_probs=215.4
Q ss_pred CCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCE
Q 040702 51 NLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSE 130 (797)
Q Consensus 51 ~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 130 (797)
.++.....++++|+++. +|..+. ++|++|+|++|+++ .+|...|.++++|++|+|++|++++..|..|.++++|++
T Consensus 29 ~C~~~~~c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 29 SCDRNGICKGSSGSLNS-IPSGLT--EAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp EECTTSEEECCSTTCSS-CCTTCC--TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCeEeeCCCCCccc-cccccc--ccCcEEECCCCcCc-ccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 34555567888888876 454443 47888888888887 667666777888888888888888777777888888888
Q ss_pred EEccCCcCcccCCccccCCCCCCeeeccCccCcCCCC-CccccccCCCCCCCcEEEccCC-CCCCCCChhhhccccCCcE
Q 040702 131 LGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTP-ELSSLSSLSNCKYLEYFSFSNN-PLGGILPRAIGNLSQSMED 208 (797)
Q Consensus 131 L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~-~~~~~~~l~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~~L~~ 208 (797)
|+|++|+|+++.+..|.++++|++|+|++|+++.++. . .|..+++|++|++++| .+..+.+..|.++
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~-----~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l------ 173 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETS-----LFSHLTKLQILRVGNMDTFTKIQRKDFAGL------ 173 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSC-----SCTTCTTCCEEEEEESSSCCEECTTTTTTC------
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchh-----hhccCCCCcEEECCCCccccccCHHHccCC------
Confidence 8888888887777778888888888888888887765 2 3667777777777777 3554444455444
Q ss_pred EEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCC
Q 040702 209 FWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSN 288 (797)
Q Consensus 209 L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 288 (797)
++| ++|++++|.+.+..|..|..+++|++|++++|+++...+..+..+++|+.|++++|
T Consensus 174 -------------------~~L--~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n 232 (353)
T 2z80_A 174 -------------------TFL--EELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDT 232 (353)
T ss_dssp -------------------CEE--EEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESC
T ss_pred -------------------CCC--CEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCC
Confidence 444 67777777777777888899999999999999998766556667899999999999
Q ss_pred CCCCCCC-CC---CCCCcccEEEccCCcCCC----CCCccccccccccEEeccCcccccccCccccCCcccceecccCcc
Q 040702 289 LLTSIPS-TL---WNLKDILHLNLSSNFFTG----PLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNR 360 (797)
Q Consensus 289 ~l~~lp~-~~---~~l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 360 (797)
.++.++. .+ .....++.+++++|.+.+ .+|..+..+++|+.|++++|+++.+.+..|..+++|++|+|++|+
T Consensus 233 ~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 312 (353)
T 2z80_A 233 DLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNP 312 (353)
T ss_dssp BCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCC
Confidence 9987753 22 235678889999998875 356778899999999999999996655667999999999999999
Q ss_pred ccCCCC
Q 040702 361 LQGSIP 366 (797)
Q Consensus 361 l~~~~p 366 (797)
+.+..|
T Consensus 313 ~~~~~~ 318 (353)
T 2z80_A 313 WDCSCP 318 (353)
T ss_dssp BCCCHH
T ss_pred ccCcCC
Confidence 986443
No 298
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.97 E-value=1.7e-30 Score=272.67 Aligned_cols=207 Identities=12% Similarity=0.027 Sum_probs=171.1
Q ss_pred cCCCccccccccCCcceeec-----ceEEEEEEEEeccCC---cchhHHHHHHHhhhccCCceeEeeeeeecCCeEEEEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYGG---AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~---~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lv~ 583 (797)
++|...+.||+|+||.||++ ++.||||+++..... ..+.+.+|+.++++++||||+++++++.+.+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 67999999999999999985 689999999765432 2367899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCc
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQ 663 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 663 (797)
||+++++|.+++... ....++.+++.|++.||+||| +++|+||||||+||+++.++.+||+++
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~----------- 173 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYP----------- 173 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSC-----------
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEec-----------
Confidence 999999999999653 355578899999999999999 999999999999999999999998743
Q ss_pred cccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh-----------------------hhhhcc
Q 040702 664 SLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE-----------------------KHLMTK 720 (797)
Q Consensus 664 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~ 720 (797)
+|++| ++.++|+|++|+..++.+.+..++.... ......
T Consensus 174 -----------~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T 3uqc_A 174 -----------ATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQ 235 (286)
T ss_dssp -----------CCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHH
T ss_pred -----------cccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHH
Confidence 34444 6899999999998866655444332211 123345
Q ss_pred cccchhccccCCCCCCCChHHHHHhHHHHHHHhc
Q 040702 721 EQPMVRMGTDLSLGQFPASYSISKYLVYIRELER 754 (797)
Q Consensus 721 ~~~l~~~cl~~dp~~RPs~~~i~~~l~~i~~~~~ 754 (797)
+.+++.+|++.||++| |+.|+++.|+.+.....
T Consensus 236 l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 236 ISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred HHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 6889999999999999 99999999988766543
No 299
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.6e-30 Score=276.34 Aligned_cols=249 Identities=24% Similarity=0.269 Sum_probs=162.1
Q ss_pred CCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCcccccc--CCchhhCCCCCCEEE
Q 040702 55 MEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGT--IPSFIFNASKLSELG 132 (797)
Q Consensus 55 L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~ 132 (797)
-+.++++++.++. +|..+. ++|++|+|++|+++ .+|..+|..+++|++|+|++|+++.. .+..+..+++|++|+
T Consensus 9 ~~~l~c~~~~l~~-ip~~~~--~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 9 GTEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp TTEEECCSSCCSS-CCSCCC--TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CCEEEcCCCCccc-CCCCCC--CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 3578899998876 454443 68999999999998 88888888899999999999998743 367778889999999
Q ss_pred ccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEcc
Q 040702 133 LQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMD 212 (797)
Q Consensus 133 L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~ 212 (797)
|++|.++. .|..|.++++|++|+|++|.++.+++. ..+..+++|++|++++|++.+..+..|..++ +|+.|+++
T Consensus 85 Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~----~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~ 158 (306)
T 2z66_A 85 LSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEF----SVFLSLRNLIYLDISHTHTRVAFNGIFNGLS-SLEVLKMA 158 (306)
T ss_dssp CCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTT----TTTTTCTTCCEEECTTSCCEECSTTTTTTCT-TCCEEECT
T ss_pred CCCCcccc-ChhhcCCCCCCCEEECCCCcccccccc----hhhhhccCCCEEECCCCcCCccchhhcccCc-CCCEEECC
Confidence 99999885 455688899999999999998887651 1367777888888888877766666665554 45555544
Q ss_pred CCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCC
Q 040702 213 NCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTS 292 (797)
Q Consensus 213 ~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 292 (797)
+|.+.+. ..|..|..+++|++|++++|++++..|..+..+++|+.|+|++|.++.
T Consensus 159 ~n~l~~~-------------------------~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 213 (306)
T 2z66_A 159 GNSFQEN-------------------------FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 213 (306)
T ss_dssp TCEEGGG-------------------------EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCccccc-------------------------cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCc
Confidence 4444320 234444555555555555555555555555555555555555555544
Q ss_pred CCC-CCCCCCcccEEEccCCcCCCCCCccccccc-cccEEeccCcccc
Q 040702 293 IPS-TLWNLKDILHLNLSSNFFTGPLPLKIGNLN-VLVQLDLSMNNFS 338 (797)
Q Consensus 293 lp~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~ 338 (797)
++. .+..+++|+.|++++|.+++..|..+..++ +|++|++++|.++
T Consensus 214 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 214 LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp CCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred cChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCee
Confidence 433 333344444444444444444444444442 4444444444443
No 300
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6.7e-30 Score=271.45 Aligned_cols=280 Identities=20% Similarity=0.252 Sum_probs=206.0
Q ss_pred CCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccC---CCcccc
Q 040702 23 LQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRL---PSSADV 99 (797)
Q Consensus 23 L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l---~~~~~~ 99 (797)
-+.++.+++. ++++|..+. ++|++|++++|+++.+.+..|.++++|++|+|++|.++ .+ +... .
T Consensus 9 ~~~l~c~~~~---------l~~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~-~ 75 (306)
T 2z66_A 9 GTEIRCNSKG---------LTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLS-FKGCCSQSD-F 75 (306)
T ss_dssp TTEEECCSSC---------CSSCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-EEEEEEHHH-H
T ss_pred CCEEEcCCCC---------cccCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccC-cccCccccc-c
Confidence 3689999988 556676554 68999999999999877778999999999999999997 43 3433 4
Q ss_pred CCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCC-ccccCCCCCCeeeccCccCcCCCCCccccccCCCC
Q 040702 100 RLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIP-NTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNC 178 (797)
Q Consensus 100 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l 178 (797)
.+++|++|+|++|.++ .+|..+..+++|++|+|++|+++++.+ ..|.++++|++|+|++|.++...+. .|..+
T Consensus 76 ~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l 149 (306)
T 2z66_A 76 GTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG-----IFNGL 149 (306)
T ss_dssp SCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTT-----TTTTC
T ss_pred cccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchh-----hcccC
Confidence 7899999999999998 467779999999999999999998776 7899999999999999999988765 48889
Q ss_pred CCCcEEEccCCCCCC-CCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCc
Q 040702 179 KYLEYFSFSNNPLGG-ILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALF 257 (797)
Q Consensus 179 ~~L~~L~Ls~N~l~~-~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 257 (797)
++|++|++++|++.+ ..|..+..++ +|+.|++++|.+++. .|..|..+++|+
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~-~L~~L~Ls~n~l~~~--------------------------~~~~~~~l~~L~ 202 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELR-NLTFLDLSQCQLEQL--------------------------SPTAFNSLSSLQ 202 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCT-TCCEEECTTSCCCEE--------------------------CTTTTTTCTTCC
T ss_pred cCCCEEECCCCccccccchhHHhhCc-CCCEEECCCCCcCCc--------------------------CHHHhcCCCCCC
Confidence 999999999999986 5677777776 566666666655544 444455555566
Q ss_pred EEEccCCcCcccCCCCccCCccccccccCCCCCCCC-CCCCCCC-CcccEEEccCCcCCCCCCc--cccccccccEEecc
Q 040702 258 QLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSI-PSTLWNL-KDILHLNLSSNFFTGPLPL--KIGNLNVLVQLDLS 333 (797)
Q Consensus 258 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l-~~L~~L~l~~N~l~~~~~~--~~~~l~~L~~L~Ls 333 (797)
+|+|++|++++..+..+..+++|+.|+|++|.++.. |..+..+ ++|+.|++++|.++...+. ....+...+.+.+.
T Consensus 203 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~ 282 (306)
T 2z66_A 203 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVE 282 (306)
T ss_dssp EEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSC
T ss_pred EEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhcc
Confidence 666666666555555555566666666666666433 3345555 3677777777777643221 11223344445556
Q ss_pred CcccccccCccccCC
Q 040702 334 MNNFSCVIPTKIGGL 348 (797)
Q Consensus 334 ~N~l~~~~~~~~~~l 348 (797)
.+.+.+..|..+.+.
T Consensus 283 ~~~~~C~~p~~~~g~ 297 (306)
T 2z66_A 283 VERMECATPSDKQGM 297 (306)
T ss_dssp GGGCBEEESGGGTTC
T ss_pred ccccccCCchhhCCc
Confidence 667777777666654
No 301
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.4e-29 Score=282.35 Aligned_cols=246 Identities=22% Similarity=0.295 Sum_probs=161.7
Q ss_pred CCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCC
Q 040702 23 LQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLP 102 (797)
Q Consensus 23 L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 102 (797)
...++.+++. ++++|..+. +++++|+|++|+|+++.|..|.++++|+.|+|++|+|+ .++...|.+++
T Consensus 56 ~~~v~c~~~~---------l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~ 123 (452)
T 3zyi_A 56 FSKVVCTRRG---------LSEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLA 123 (452)
T ss_dssp SCEEECCSSC---------CSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCT
T ss_pred CcEEEECCCC---------cCccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccC-CcChhhccCcc
Confidence 3455555554 334444443 35666666666666666666666666666666666665 44545555666
Q ss_pred CccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccC-ccCcCCCCCccccccCCCCCCC
Q 040702 103 NLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLND-NYLTSSTPELSSLSSLSNCKYL 181 (797)
Q Consensus 103 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~-N~l~~~~~~~~~~~~l~~l~~L 181 (797)
+|++|+|++|+|+...+..|.++++|++|+|++|+|+.+.+..|.++++|++|+|++ |.+..++.. .|.++++|
T Consensus 124 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~-----~~~~l~~L 198 (452)
T 3zyi_A 124 SLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEG-----AFEGLFNL 198 (452)
T ss_dssp TCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTT-----TTTTCTTC
T ss_pred cCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChh-----hccCCCCC
Confidence 666666666666655555566666666666666666665555666666666666665 444444443 25555566
Q ss_pred cEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEc
Q 040702 182 EYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDL 261 (797)
Q Consensus 182 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 261 (797)
++|+|++|+++++ | .+..+++| ++|+|++|.++++.|..|..+++|+.|+|
T Consensus 199 ~~L~L~~n~l~~~-~--------------------------~~~~l~~L--~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 249 (452)
T 3zyi_A 199 KYLNLGMCNIKDM-P--------------------------NLTPLVGL--EELEMSGNHFPEIRPGSFHGLSSLKKLWV 249 (452)
T ss_dssp CEEECTTSCCSSC-C--------------------------CCTTCTTC--CEEECTTSCCSEECGGGGTTCTTCCEEEC
T ss_pred CEEECCCCccccc-c--------------------------cccccccc--cEEECcCCcCcccCcccccCccCCCEEEe
Confidence 6666666655533 1 23344455 77777777777777888888888888888
Q ss_pred cCCcCcccCCCCccCCccccccccCCCCCCCCCCC-CCCCCcccEEEccCCcCC
Q 040702 262 GGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPST-LWNLKDILHLNLSSNFFT 314 (797)
Q Consensus 262 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~l~~N~l~ 314 (797)
++|+++++.+..|.++++|+.|+|++|+|+.+|.. +..+++|+.|++++|.+.
T Consensus 250 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 250 MNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 88888888888888888888888888888888764 556888999999998876
No 302
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.4e-29 Score=281.29 Aligned_cols=246 Identities=23% Similarity=0.299 Sum_probs=163.8
Q ss_pred CCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCC
Q 040702 23 LQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLP 102 (797)
Q Consensus 23 L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 102 (797)
...++.+++. ++++|..+. ++++.|+|++|+|+++.+..|.++++|++|+|++|.|+ .++...|.+++
T Consensus 45 ~~~v~c~~~~---------l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~ 112 (440)
T 3zyj_A 45 FSKVICVRKN---------LREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLA 112 (440)
T ss_dssp SCEEECCSCC---------CSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCC-EECGGGGTTCS
T ss_pred CCEEEeCCCC---------cCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCC-ccChhhccCCc
Confidence 4455665555 344455443 45666666666666666666666666666666666665 55555555666
Q ss_pred CccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccC-ccCcCCCCCccccccCCCCCCC
Q 040702 103 NLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLND-NYLTSSTPELSSLSSLSNCKYL 181 (797)
Q Consensus 103 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~-N~l~~~~~~~~~~~~l~~l~~L 181 (797)
+|++|+|++|+|+...+..|..+++|++|+|++|+|+.+.+..|.++++|++|+|++ |.+..+++. .|.++++|
T Consensus 113 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~-----~~~~l~~L 187 (440)
T 3zyj_A 113 NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG-----AFEGLSNL 187 (440)
T ss_dssp SCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTT-----TTTTCSSC
T ss_pred cCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcc-----hhhccccc
Confidence 666666666666655555566666666666666666666666666666666666666 344444443 25556666
Q ss_pred cEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEc
Q 040702 182 EYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDL 261 (797)
Q Consensus 182 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 261 (797)
++|+|++|+++.+ | .+..+++| ++|+|++|+++++.|..|..+++|+.|+|
T Consensus 188 ~~L~L~~n~l~~~--------------------------~-~~~~l~~L--~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 238 (440)
T 3zyj_A 188 RYLNLAMCNLREI--------------------------P-NLTPLIKL--DELDLSGNHLSAIRPGSFQGLMHLQKLWM 238 (440)
T ss_dssp CEEECTTSCCSSC--------------------------C-CCTTCSSC--CEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CeecCCCCcCccc--------------------------c-ccCCCccc--CEEECCCCccCccChhhhccCccCCEEEC
Confidence 6666666665533 1 13344444 77777777777777788888888888888
Q ss_pred cCCcCcccCCCCccCCccccccccCCCCCCCCCCC-CCCCCcccEEEccCCcCC
Q 040702 262 GGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPST-LWNLKDILHLNLSSNFFT 314 (797)
Q Consensus 262 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~l~~N~l~ 314 (797)
++|+++++.+..|.++++|+.|+|++|+++.+|.. +..+++|+.|++++|.+.
T Consensus 239 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 239 IQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 88888888888888888888888888888888764 556888899999998876
No 303
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=1.1e-30 Score=288.99 Aligned_cols=224 Identities=14% Similarity=0.096 Sum_probs=169.6
Q ss_pred hcCCCccccccccCCcceeec-----ceEEEEEEEEeccC---CcchhHHHHHHHhhhccC-Cce---------------
Q 040702 511 TNRFSENNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG---GAFKSFDIECGMMKRIRH-RNL--------------- 566 (797)
Q Consensus 511 ~~~f~~~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H-pni--------------- 566 (797)
+..|...+.||+|+||.||++ ++.||||+++.... ...+.+.+|+.+++.++| +|.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 456788899999999999985 68999999874432 235789999999999976 221
Q ss_pred eEe------eeeeec-----CCeEEEEEEccCCCCHHHHHh------cCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCe
Q 040702 567 IKI------ISSCSN-----DDFKALVLEYMPLGSLEKCLY------SGNYILDIFQGLNIMIDVASALEYLHFGYSVPI 629 (797)
Q Consensus 567 v~l------~~~~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~i 629 (797)
+.+ ..++.. ....+++|+++ +++|.+++. .....+++..+..++.|+++||+||| +++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 111 111111 12457788876 579999884 22335788899999999999999999 9999
Q ss_pred EEcCCCCCceEEcCCCcEEEEeecCCccCCccCccccccccccCccccccccc----------ccCccchHHHHHHHhhh
Q 040702 630 IHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEI----------FSGEMRLKCWVNDSLLI 699 (797)
Q Consensus 630 vHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~dv~s~~~~ 699 (797)
+||||||+|||++.++.+||+|||+++..... ....+| +.|||||.+ ....++.++|+|++|+.
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi 306 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence 99999999999999999999999999865322 344577 999999998 55568999999999999
Q ss_pred hhhhhccccccchhhh------------hhhcccccchhccccCCCCCCCChHHHHH
Q 040702 700 SVMIVVDANLLIREEK------------HLMTKEQPMVRMGTDLSLGQFPASYSISK 744 (797)
Q Consensus 700 ~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~cl~~dp~~RPs~~~i~~ 744 (797)
.++.+....++..... .....+.++++.|++.||++||++.++++
T Consensus 307 l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 307 IYWIWCADLPNTDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHHSSCCCCTTGGGSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHCCCCCCCcchhhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 8666654444332211 23346678899999999999999988865
No 304
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.2e-29 Score=264.60 Aligned_cols=223 Identities=25% Similarity=0.317 Sum_probs=104.7
Q ss_pred CEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccC
Q 040702 56 EWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQK 135 (797)
Q Consensus 56 ~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 135 (797)
+.++++++.++.+ |..+ .++|++|+|++|.++ .++...|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~~~c~~~~l~~i-p~~~--~~~l~~L~l~~n~i~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQAV-PVGI--PAASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCSSC-CTTC--CTTCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcccC-CcCC--CCCceEEEeeCCcCC-ccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 3455555555432 3222 234555555555554 34444444455555555555555444444455555555555555
Q ss_pred Cc-CcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCC
Q 040702 136 NS-FSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNC 214 (797)
Q Consensus 136 N~-l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n 214 (797)
|+ ++.+.+..|.++++|++|+|++|.++.+++. .|.++++|++|++++|+++++.+..|..+
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~~~~l------------ 152 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPG-----LFRGLAALQYLYLQDNALQALPDDTFRDL------------ 152 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT-----TTTTCTTCCEEECCSSCCCCCCTTTTTTC------------
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHh-----HhhCCcCCCEEECCCCcccccCHhHhccC------------
Confidence 54 4444444444445555555555444444332 23444444444444444443333333332
Q ss_pred cccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCC
Q 040702 215 NISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIP 294 (797)
Q Consensus 215 ~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp 294 (797)
++| ++|++++|+++++.+..|..+++|++|++++|++++..|..|..+++|+.|++++|.++.+|
T Consensus 153 -------------~~L--~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 217 (285)
T 1ozn_A 153 -------------GNL--THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 217 (285)
T ss_dssp -------------TTC--CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred -------------CCc--cEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCC
Confidence 222 34444444444344444555555555555555555555555555555555555555554444
Q ss_pred C-CCCCCCcccEEEccCCcCC
Q 040702 295 S-TLWNLKDILHLNLSSNFFT 314 (797)
Q Consensus 295 ~-~~~~l~~L~~L~l~~N~l~ 314 (797)
. .+..+++|+.|++++|.+.
T Consensus 218 ~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 218 TEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp HHHHTTCTTCCEEECCSSCEE
T ss_pred HHHcccCcccCEEeccCCCcc
Confidence 3 2344444555555555444
No 305
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=9.6e-30 Score=269.25 Aligned_cols=204 Identities=19% Similarity=0.247 Sum_probs=167.5
Q ss_pred hcCCCcc-ccccccCCcceeec-----ceEEEEEEEEeccCCcchhHHHHHHHh-hhccCCceeEeeeeeec----CCeE
Q 040702 511 TNRFSEN-NLIGRGGFGPVYKD-----GMEVAIKVFNLQYGGAFKSFDIECGMM-KRIRHRNLIKIISSCSN----DDFK 579 (797)
Q Consensus 511 ~~~f~~~-~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l-~~l~Hpniv~l~~~~~~----~~~~ 579 (797)
.++|... +.||+|+||.||++ ++.||||+++. ...+.+|+.++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3567776 78999999999974 68999999863 35678899888 55589999999999876 6678
Q ss_pred EEEEEccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcC---CCcEEEEeecCC
Q 040702 580 ALVLEYMPLGSLEKCLYSGNY-ILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDD---NMVAHLSDFGMA 655 (797)
Q Consensus 580 ~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~---~~~~kl~DFGla 655 (797)
++||||+++|+|.+++..... .+++..++.++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 999999999999999987543 6899999999999999999999 999999999999999997 788999999999
Q ss_pred ccCCccCccccccccccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhh---------------------
Q 040702 656 KPLLEEDQSLTQTQTLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREE--------------------- 714 (797)
Q Consensus 656 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~--------------------- 714 (797)
+... +..++.++|+|++|+..+..+.+..++....
T Consensus 168 ~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (299)
T 3m2w_A 168 KETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 223 (299)
T ss_dssp EECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCH
T ss_pred cccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCc
Confidence 7431 2346789999999999866555444332111
Q ss_pred ---hhhhcccccchhccccCCCCCCCChHHHHHhH
Q 040702 715 ---KHLMTKEQPMVRMGTDLSLGQFPASYSISKYL 746 (797)
Q Consensus 715 ---~~~~~~~~~l~~~cl~~dp~~RPs~~~i~~~l 746 (797)
......+.++++.|++.||.+||++.|+++.-
T Consensus 224 ~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 224 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hhcccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 12344677899999999999999999998753
No 306
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=3.1e-28 Score=280.39 Aligned_cols=267 Identities=26% Similarity=0.295 Sum_probs=153.0
Q ss_pred CCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEcc
Q 040702 55 MEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQ 134 (797)
Q Consensus 55 L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 134 (797)
++.|++++|+++. +|..+. ++|+.|+|++|.|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|+
T Consensus 42 l~~L~ls~n~L~~-lp~~l~--~~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 42 NAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIF 109 (622)
T ss_dssp CCEEECCSSCCSC-CCSCCC--TTCSEEEECSCCCS-CCCC----CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEEC
T ss_pred CcEEEecCCCcCc-cChhhC--CCCcEEEecCCCCC-CCCC----cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECc
Confidence 4455555555542 333332 45555555555554 4444 23555555555555542 222 34555555555
Q ss_pred CCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCC
Q 040702 135 KNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNC 214 (797)
Q Consensus 135 ~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n 214 (797)
+|+|+++.+ .+++|++|+|++|+|+.++.. +++|++|+|++|+++++. .. +.+|+.|+
T Consensus 110 ~N~l~~l~~----~l~~L~~L~L~~N~l~~lp~~---------l~~L~~L~Ls~N~l~~l~-~~----~~~L~~L~---- 167 (622)
T 3g06_A 110 SNPLTHLPA----LPSGLCKLWIFGNQLTSLPVL---------PPGLQELSVSDNQLASLP-AL----PSELCKLW---- 167 (622)
T ss_dssp SCCCCCCCC----CCTTCCEEECCSSCCSCCCCC---------CTTCCEEECCSSCCSCCC-CC----CTTCCEEE----
T ss_pred CCcCCCCCC----CCCCcCEEECCCCCCCcCCCC---------CCCCCEEECcCCcCCCcC-Cc----cCCCCEEE----
Confidence 555554332 345555555665555554432 245555666666555432 11 11333333
Q ss_pred cccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCC
Q 040702 215 NISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIP 294 (797)
Q Consensus 215 ~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp 294 (797)
+++|.++++ | ..+++|+.|++++|+++++. . .+++|+.|++++|.++.+|
T Consensus 168 ----------------------L~~N~l~~l-~---~~~~~L~~L~Ls~N~l~~l~-~---~~~~L~~L~L~~N~l~~l~ 217 (622)
T 3g06_A 168 ----------------------AYNNQLTSL-P---MLPSGLQELSVSDNQLASLP-T---LPSELYKLWAYNNRLTSLP 217 (622)
T ss_dssp ----------------------CCSSCCSCC-C---CCCTTCCEEECCSSCCSCCC-C---CCTTCCEEECCSSCCSSCC
T ss_pred ----------------------CCCCCCCCC-c---ccCCCCcEEECCCCCCCCCC-C---ccchhhEEECcCCcccccC
Confidence 333333322 2 23456666666666666432 2 2356777777777777666
Q ss_pred CCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhcccc
Q 040702 295 STLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLIS 374 (797)
Q Consensus 295 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 374 (797)
.. +++|+.|++++|.+++ +| ..+++|+.|++++|.|+.+ |. .+++|+.|+|++|+|+ .+|..+..+++
T Consensus 218 ~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~l-p~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~ 285 (622)
T 3g06_A 218 AL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSL-PM---LPSGLLSLSVYRNQLT-RLPESLIHLSS 285 (622)
T ss_dssp CC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCC-SCCGGGGGSCT
T ss_pred CC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcC-Cc---ccccCcEEeCCCCCCC-cCCHHHhhccc
Confidence 43 3667777777777775 33 3456777788888877743 33 4577888888888887 56777888888
Q ss_pred CCeeeecCCcCCCCCChhhhccC
Q 040702 375 LKSLNLSNNNLSGTIPISLEKLL 397 (797)
Q Consensus 375 L~~L~Ls~N~l~~~~p~~~~~l~ 397 (797)
|+.|+|++|.+++..|..+..++
T Consensus 286 L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 286 ETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TCEEECCSCCCCHHHHHHHHHHH
T ss_pred cCEEEecCCCCCCcCHHHHHhcc
Confidence 88888888888877777776654
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=9.2e-29 Score=276.56 Aligned_cols=248 Identities=22% Similarity=0.223 Sum_probs=164.6
Q ss_pred CCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeec
Q 040702 78 TLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGL 157 (797)
Q Consensus 78 ~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L 157 (797)
..+.++.+++.++ .+|..+. +++++|+|++|+|++..+..|.++++|++|+|++|+|+.+.+++|.++++|++|+|
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCEEEeCCCCcC-cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 4567777777777 7777654 67788888888887777777888888888888888888777788888888888888
Q ss_pred cCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhccc
Q 040702 158 NDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSL 237 (797)
Q Consensus 158 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~L 237 (797)
++|+|+.+++. .|..+++|++|+|++|++..+.+..|..++ +|+.|++++|+..
T Consensus 120 ~~n~l~~~~~~-----~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~l~~~~~l-------------------- 173 (440)
T 3zyj_A 120 FDNRLTTIPNG-----AFVYLSKLKELWLRNNPIESIPSYAFNRIP-SLRRLDLGELKRL-------------------- 173 (440)
T ss_dssp CSSCCSSCCTT-----TSCSCSSCCEEECCSCCCCEECTTTTTTCT-TCCEEECCCCTTC--------------------
T ss_pred CCCcCCeeCHh-----HhhccccCceeeCCCCcccccCHHHhhhCc-ccCEeCCCCCCCc--------------------
Confidence 88888877765 377777888888888888777666777666 6666666653322
Q ss_pred ccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCC-CCCCCCCCcccEEEccCCcCCCC
Q 040702 238 EGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSI-PSTLWNLKDILHLNLSSNFFTGP 316 (797)
Q Consensus 238 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~l~~N~l~~~ 316 (797)
..+.+..|.++++|++|+|++|+++.+ | .+..+++|+.|+|++|.++.+ |..+.++++|+.|++++|++++.
T Consensus 174 -----~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 246 (440)
T 3zyj_A 174 -----SYISEGAFEGLSNLRYLNLAMCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVI 246 (440)
T ss_dssp -----CEECTTTTTTCSSCCEEECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred -----ceeCcchhhcccccCeecCCCCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEE
Confidence 112233444555555555555555533 2 245555556666666655544 33555566666666666666655
Q ss_pred CCccccccccccEEeccCcccccccCccccCCcccceecccCcccc
Q 040702 317 LPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQ 362 (797)
Q Consensus 317 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 362 (797)
.+..|.++++|+.|+|++|+++...+..|..+++|+.|+|++|++.
T Consensus 247 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 247 ERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 5666666666666666666666666666666666666666666654
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.6e-29 Score=264.03 Aligned_cols=227 Identities=23% Similarity=0.286 Sum_probs=189.7
Q ss_pred CCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccC
Q 040702 21 SSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVR 100 (797)
Q Consensus 21 ~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~ 100 (797)
..-+++|.+++. ++.+|..+ .++|++|++++|+++++.+..|.++++|++|+|++|.++ .++...|..
T Consensus 11 ~~~~~~~c~~~~---------l~~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~~~~ 78 (285)
T 1ozn_A 11 EPKVTTSCPQQG---------LQAVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA-RIDAAAFTG 78 (285)
T ss_dssp SSSCEEECCSSC---------CSSCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTT
T ss_pred CCCeEEEcCcCC---------cccCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccc-eeCHhhcCC
Confidence 344789999888 44556554 368999999999999988889999999999999999998 665566778
Q ss_pred CCCccEEEccCcc-ccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCC
Q 040702 101 LPNLKELHLWGNN-FIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCK 179 (797)
Q Consensus 101 l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~ 179 (797)
+++|++|+|++|. +....|..|..+++|++|+|++|+++++.+..|.++++|++|+|++|.++.+++. .|..++
T Consensus 79 l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~ 153 (285)
T 1ozn_A 79 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD-----TFRDLG 153 (285)
T ss_dssp CTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCT
T ss_pred ccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHh-----HhccCC
Confidence 9999999999997 8877788999999999999999999998899999999999999999999988875 378899
Q ss_pred CCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEE
Q 040702 180 YLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQL 259 (797)
Q Consensus 180 ~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 259 (797)
+|++|++++|+++++.+..|..++ +|+.|++++|.+++..|..|..+++| ++|++++|.++++.+..|..+++|+.|
T Consensus 154 ~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L--~~L~l~~n~l~~~~~~~~~~l~~L~~L 230 (285)
T 1ozn_A 154 NLTHLFLHGNRISSVPERAFRGLH-SLDRLLLHQNRVAHVHPHAFRDLGRL--MTLYLFANNLSALPTEALAPLRALQYL 230 (285)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTC--CEEECCSSCCSCCCHHHHTTCTTCCEE
T ss_pred CccEEECCCCcccccCHHHhcCcc-ccCEEECCCCcccccCHhHccCcccc--cEeeCCCCcCCcCCHHHcccCcccCEE
Confidence 999999999999988777788877 78888888888887777777777776 777777777776666667777777777
Q ss_pred EccCCcCc
Q 040702 260 DLGGNKLS 267 (797)
Q Consensus 260 ~Ls~N~l~ 267 (797)
++++|.+.
T Consensus 231 ~l~~N~~~ 238 (285)
T 1ozn_A 231 RLNDNPWV 238 (285)
T ss_dssp ECCSSCEE
T ss_pred eccCCCcc
Confidence 77777765
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=9.1e-29 Score=277.62 Aligned_cols=242 Identities=25% Similarity=0.259 Sum_probs=198.7
Q ss_pred CCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEE
Q 040702 3 SLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSL 82 (797)
Q Consensus 3 ~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L 82 (797)
+.+++.++. +|..+ .+++++|||++|++++.. |..+.++++|++|+|++|+|+++.|..|.++++|++|
T Consensus 60 ~c~~~~l~~-iP~~~--~~~l~~L~L~~n~i~~~~--------~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 128 (452)
T 3zyi_A 60 VCTRRGLSE-VPQGI--PSNTRYLNLMENNIQMIQ--------ADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTL 128 (452)
T ss_dssp ECCSSCCSS-CCSCC--CTTCSEEECCSSCCCEEC--------TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred EECCCCcCc-cCCCC--CCCccEEECcCCcCceEC--------HHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEE
Confidence 344555554 44333 479999999999966543 4578899999999999999999999999999999999
Q ss_pred EccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccC-CcCcccCCccccCCCCCCeeeccCcc
Q 040702 83 YLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQK-NSFSGSIPNTFGNLRNLKWLGLNDNY 161 (797)
Q Consensus 83 ~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~f~~l~~L~~L~L~~N~ 161 (797)
+|++|+|+ .+|...|..+++|++|+|++|+|+.+.+..|.++++|++|+|++ |.+..+.+..|.++++|++|+|++|+
T Consensus 129 ~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~ 207 (452)
T 3zyi_A 129 ELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCN 207 (452)
T ss_dssp ECCSSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSC
T ss_pred ECCCCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCc
Confidence 99999998 88888888999999999999999988888999999999999999 77888888899999999999999999
Q ss_pred CcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhccccccc
Q 040702 162 LTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQ 241 (797)
Q Consensus 162 l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~ 241 (797)
++.++. +..+++|+.|+|++|++.++.|..|.+++ +|+.|++++|.++
T Consensus 208 l~~~~~-------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~n~l~------------------------ 255 (452)
T 3zyi_A 208 IKDMPN-------LTPLVGLEELEMSGNHFPEIRPGSFHGLS-SLKKLWVMNSQVS------------------------ 255 (452)
T ss_dssp CSSCCC-------CTTCTTCCEEECTTSCCSEECGGGGTTCT-TCCEEECTTSCCC------------------------
T ss_pred cccccc-------ccccccccEEECcCCcCcccCcccccCcc-CCCEEEeCCCcCc------------------------
Confidence 998753 77888999999999999988888887776 5655555555554
Q ss_pred ccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCC
Q 040702 242 LEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLL 290 (797)
Q Consensus 242 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 290 (797)
++.+..|..+++|+.|+|++|+++++.+..|..+++|+.|+|++|.+
T Consensus 256 --~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 256 --LIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp --EECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred --eECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCc
Confidence 44555566666777777777777766666667777777777777766
No 310
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.1e-28 Score=281.90 Aligned_cols=269 Identities=22% Similarity=0.258 Sum_probs=199.0
Q ss_pred CCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccC
Q 040702 21 SSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVR 100 (797)
Q Consensus 21 ~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~ 100 (797)
.++++||+++|.+ +.+|..+. ++|++|++++|+|+++ |. .+++|++|+|++|+|+ .+|. .
T Consensus 40 ~~l~~L~ls~n~L---------~~lp~~l~--~~L~~L~L~~N~l~~l-p~---~l~~L~~L~Ls~N~l~-~lp~----~ 99 (622)
T 3g06_A 40 NGNAVLNVGESGL---------TTLPDCLP--AHITTLVIPDNNLTSL-PA---LPPELRTLEVSGNQLT-SLPV----L 99 (622)
T ss_dssp HCCCEEECCSSCC---------SCCCSCCC--TTCSEEEECSCCCSCC-CC---CCTTCCEEEECSCCCS-CCCC----C
T ss_pred CCCcEEEecCCCc---------CccChhhC--CCCcEEEecCCCCCCC-CC---cCCCCCEEEcCCCcCC-cCCC----C
Confidence 4689999999994 45566555 7899999999999864 44 5789999999999998 7886 5
Q ss_pred CCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCC
Q 040702 101 LPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKY 180 (797)
Q Consensus 101 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~ 180 (797)
+++|++|+|++|+|++. |. .+++|++|+|++|+|+.+.+ .+++|++|+|++|+++.++.. +++
T Consensus 100 l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~l~~~---------~~~ 162 (622)
T 3g06_A 100 PPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPAL---------PSE 162 (622)
T ss_dssp CTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCCCC---------CTT
T ss_pred CCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCcCCC----CCCCCCEEECcCCcCCCcCCc---------cCC
Confidence 79999999999999854 44 57899999999999997554 258999999999999987642 367
Q ss_pred CcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEE
Q 040702 181 LEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLD 260 (797)
Q Consensus 181 L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 260 (797)
|+.|++++|+++++. ..+ .+|+.|++++|.+++ +|. .+++|+.|+
T Consensus 163 L~~L~L~~N~l~~l~----~~~-~~L~~L~Ls~N~l~~-l~~-----------------------------~~~~L~~L~ 207 (622)
T 3g06_A 163 LCKLWAYNNQLTSLP----MLP-SGLQELSVSDNQLAS-LPT-----------------------------LPSELYKLW 207 (622)
T ss_dssp CCEEECCSSCCSCCC----CCC-TTCCEEECCSSCCSC-CCC-----------------------------CCTTCCEEE
T ss_pred CCEEECCCCCCCCCc----ccC-CCCcEEECCCCCCCC-CCC-----------------------------ccchhhEEE
Confidence 999999999999653 222 356666666666553 111 124566666
Q ss_pred ccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccc
Q 040702 261 LGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCV 340 (797)
Q Consensus 261 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 340 (797)
+++|.++.+. . .+++|+.|+|++|.|+.+| ..+++|+.|++++|.|+. +|. .+++|+.|+|++|+|+ .
T Consensus 208 L~~N~l~~l~-~---~~~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~ 275 (622)
T 3g06_A 208 AYNNRLTSLP-A---LPSGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-R 275 (622)
T ss_dssp CCSSCCSSCC-C---CCTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-S
T ss_pred CcCCcccccC-C---CCCCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-c
Confidence 6666666432 2 2356777777777777666 334667777777777774 333 4567778888888887 4
Q ss_pred cCccccCCcccceecccCccccCCCChhhhccc
Q 040702 341 IPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLI 373 (797)
Q Consensus 341 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 373 (797)
+|..|.++++|+.|+|++|++++..|..+..++
T Consensus 276 lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 276 LPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 566777888888888888888777777776665
No 311
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=1.1e-30 Score=278.68 Aligned_cols=253 Identities=20% Similarity=0.180 Sum_probs=118.8
Q ss_pred EccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccC
Q 040702 83 YLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYL 162 (797)
Q Consensus 83 ~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l 162 (797)
+++.+.+. ..+...+..+++|++|+|++|++++..|..|.++++|++|+|++|+|+++.+ |.++++|++|+|++|.+
T Consensus 16 ~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l 92 (317)
T 3o53_A 16 KVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYV 92 (317)
T ss_dssp SCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEE
T ss_pred eccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcc
Confidence 34444443 3333333344444444444444444444444445555555555555443332 44555555555555554
Q ss_pred cCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccc
Q 040702 163 TSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQL 242 (797)
Q Consensus 163 ~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l 242 (797)
+.+++ .++|+.|++++|+++++.+..+ + +|+.|++++|.+++..+..+..+++| ++|++++|.+
T Consensus 93 ~~l~~----------~~~L~~L~l~~n~l~~~~~~~~---~-~L~~L~l~~N~l~~~~~~~~~~l~~L--~~L~Ls~N~l 156 (317)
T 3o53_A 93 QELLV----------GPSIETLHAANNNISRVSCSRG---Q-GKKNIYLANNKITMLRDLDEGCRSRV--QYLDLKLNEI 156 (317)
T ss_dssp EEEEE----------CTTCCEEECCSSCCSEEEECCC---S-SCEEEECCSSCCCSGGGBCTGGGSSE--EEEECTTSCC
T ss_pred ccccC----------CCCcCEEECCCCccCCcCcccc---C-CCCEEECCCCCCCCccchhhhccCCC--CEEECCCCCC
Confidence 43321 1345555555555544332221 1 34444444444443333333333333 4444555544
Q ss_pred cCCCchhhc-CCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccc
Q 040702 243 EGSIPDDLC-RLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKI 321 (797)
Q Consensus 243 ~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~ 321 (797)
++..+..+. .+++|++|+|++|+++++.+ ...+++|++|+|++|.++.+|..+..+++|+.|++++|.++. +|..+
T Consensus 157 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~-l~~~~ 233 (317)
T 3o53_A 157 DTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKAL 233 (317)
T ss_dssp CEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTC
T ss_pred CcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccc-hhhHh
Confidence 444444442 45556666666666554422 122555555555555555555545555555555555555552 34444
Q ss_pred cccccccEEeccCcccc-cccCccccCCcccceeccc
Q 040702 322 GNLNVLVQLDLSMNNFS-CVIPTKIGGLKDLQYLFLE 357 (797)
Q Consensus 322 ~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls 357 (797)
..+++|+.|++++|.+. +..|..+..+++|+.|+++
T Consensus 234 ~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 234 RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp CCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred hcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 55555555555555554 3344444555555555554
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=1.8e-30 Score=277.13 Aligned_cols=247 Identities=20% Similarity=0.140 Sum_probs=157.0
Q ss_pred CCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCE
Q 040702 51 NLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSE 130 (797)
Q Consensus 51 ~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 130 (797)
.+++|++|++++|+++++.|..|.++++|++|+|++|.+++..+ +..+++|++|+|++|++++.. ..++|++
T Consensus 32 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~ 103 (317)
T 3o53_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELL-----VGPSIET 103 (317)
T ss_dssp TGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE---ETTCTTCCEEECCSSEEEEEE-----ECTTCCE
T ss_pred cCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh---hhhcCCCCEEECcCCcccccc-----CCCCcCE
Confidence 34455555555555555555555555555555555555552222 445555555555555554322 1245555
Q ss_pred EEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEE
Q 040702 131 LGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFW 210 (797)
Q Consensus 131 L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~ 210 (797)
|++++|+|+++.+.. +++|++|+|++|++ +++.+..+..++ +|+.|+
T Consensus 104 L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l-----------------------------~~~~~~~~~~l~-~L~~L~ 150 (317)
T 3o53_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKI-----------------------------TMLRDLDEGCRS-RVQYLD 150 (317)
T ss_dssp EECCSSCCSEEEECC---CSSCEEEECCSSCC-----------------------------CSGGGBCTGGGS-SEEEEE
T ss_pred EECCCCccCCcCccc---cCCCCEEECCCCCC-----------------------------CCccchhhhccC-CCCEEE
Confidence 555555555443332 23444455555544 444444444444 455555
Q ss_pred ccCCcccccCChhhh-hhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCC
Q 040702 211 MDNCNISGSIPEEIN-NLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNL 289 (797)
Q Consensus 211 L~~n~i~~~~p~~~~-~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 289 (797)
+++|.+++..+..+. .+++| ++|+|++|.+++.. ....+++|++|+|++|+++++.+ .+..+++|+.|+|++|.
T Consensus 151 Ls~N~l~~~~~~~~~~~l~~L--~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~ 225 (317)
T 3o53_A 151 LKLNEIDTVNFAELAASSDTL--EHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNK 225 (317)
T ss_dssp CTTSCCCEEEGGGGGGGTTTC--CEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSC
T ss_pred CCCCCCCcccHHHHhhccCcC--CEEECCCCcCcccc--cccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCc
Confidence 555555544444442 44555 66677777766542 22348899999999999997655 48899999999999999
Q ss_pred CCCCCCCCCCCCcccEEEccCCcCC-CCCCccccccccccEEeccC-cccccccCc
Q 040702 290 LTSIPSTLWNLKDILHLNLSSNFFT-GPLPLKIGNLNVLVQLDLSM-NNFSCVIPT 343 (797)
Q Consensus 290 l~~lp~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~ 343 (797)
++.+|..+..+++|+.|++++|.+. +..+..+..+++|+.|++++ +.+++..|.
T Consensus 226 l~~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 226 LVLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp CCEECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred ccchhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 9999999989999999999999998 67778888999999999985 456655444
No 313
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=8.2e-29 Score=265.20 Aligned_cols=228 Identities=24% Similarity=0.309 Sum_probs=137.8
Q ss_pred CCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCcccc
Q 040702 20 PSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADV 99 (797)
Q Consensus 20 l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~ 99 (797)
...+++|||++|+ ++.+|..+..+++|++|+|++|+++ .+|..|+++++|++|+|++|.++ .+|..+ .
T Consensus 80 ~~~l~~L~L~~n~---------l~~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l-~ 147 (328)
T 4fcg_A 80 QPGRVALELRSVP---------LPQFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASI-A 147 (328)
T ss_dssp STTCCEEEEESSC---------CSSCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGG-G
T ss_pred ccceeEEEccCCC---------chhcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHH-h
Confidence 3667777777776 3355666667777777777777777 56777777777777777777776 666553 4
Q ss_pred CCCCccEEEccCccccccCCchhhC---------CCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCcc
Q 040702 100 RLPNLKELHLWGNNFIGTIPSFIFN---------ASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELS 170 (797)
Q Consensus 100 ~l~~L~~L~L~~N~l~~~~~~~~~~---------l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~ 170 (797)
.+++|++|+|++|++.+.+|..+.. +++|++|+|++|+|+ ..|..|.++++|++|+|++|.++.+++.
T Consensus 148 ~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~-- 224 (328)
T 4fcg_A 148 SLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPA-- 224 (328)
T ss_dssp GCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGG--
T ss_pred cCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchh--
Confidence 6777777777777666666665543 555555555555555 3344455555555555555555544432
Q ss_pred ccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhh
Q 040702 171 SLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDL 250 (797)
Q Consensus 171 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~ 250 (797)
+..+++|++|+|++|++.+..|..|.. +++| ++|++++|.+.+.+|..+
T Consensus 225 ----l~~l~~L~~L~Ls~n~~~~~~p~~~~~-------------------------l~~L--~~L~L~~n~~~~~~p~~~ 273 (328)
T 4fcg_A 225 ----IHHLPKLEELDLRGCTALRNYPPIFGG-------------------------RAPL--KRLILKDCSNLLTLPLDI 273 (328)
T ss_dssp ----GGGCTTCCEEECTTCTTCCBCCCCTTC-------------------------CCCC--CEEECTTCTTCCBCCTTG
T ss_pred ----hccCCCCCEEECcCCcchhhhHHHhcC-------------------------CCCC--CEEECCCCCchhhcchhh
Confidence 344445555555555555454444444 4444 555555555555555556
Q ss_pred cCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCC
Q 040702 251 CRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSI 293 (797)
Q Consensus 251 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 293 (797)
..+++|++|+|++|.+.+.+|..++.+++|+.+++..|.+..+
T Consensus 274 ~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 274 HRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQL 316 (328)
T ss_dssp GGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC-
T ss_pred hcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHHH
Confidence 6666666666666666666666666666666666665555444
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.2e-30 Score=272.28 Aligned_cols=250 Identities=22% Similarity=0.233 Sum_probs=124.1
Q ss_pred cCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCc-ccCCCccc------cCCCCccEEEccCccccccCCchh
Q 040702 50 DNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLS-GRLPSSAD------VRLPNLKELHLWGNNFIGTIPSFI 122 (797)
Q Consensus 50 ~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~-~~l~~~~~------~~l~~L~~L~L~~N~l~~~~~~~~ 122 (797)
+..++|+.|++++|++ .+|..+... |+.|+|++|.++ ..+|...+ .++++|++|+|++|++++..|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3344455555555555 234433332 555555555552 12222221 134455555555555554444443
Q ss_pred --hCCCCCCEEEccCCcCcccCCccccCC-----CCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCC
Q 040702 123 --FNASKLSELGLQKNSFSGSIPNTFGNL-----RNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGIL 195 (797)
Q Consensus 123 --~~l~~L~~L~L~~N~l~~~~~~~f~~l-----~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 195 (797)
..+++|++|+|++|+|+++ |..|.++ ++|++|+|++|+++.+++. .|..+++|++|+|++|++.+..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~Ls~N~l~~~~ 189 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCE-----QVRVFPALSTLDLSDNPELGER 189 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTT-----TCCCCSSCCEEECCSCTTCHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHH-----HhccCCCCCEEECCCCCcCcch
Confidence 4455555555555555544 4444444 4555555555555444432 2444444445555444443220
Q ss_pred ChhhhccccCCcEEEccCCcccccCChhh--hhhhhhHhhhcccccccccC---CCchhhcCCCCCcEEEccCCcCcccC
Q 040702 196 PRAIGNLSQSMEDFWMDNCNISGSIPEEI--NNLTNLILQLLSLEGNQLEG---SIPDDLCRLAALFQLDLGGNKLSGFV 270 (797)
Q Consensus 196 ~~~~~~l~~~L~~L~L~~n~i~~~~p~~~--~~l~~L~L~~L~Ls~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~ 270 (797)
+ .|..+ ..+++| ++|++++|++++ .....+..+++|++|+|++|++++..
T Consensus 190 ~-----------------------~~~~~~~~~l~~L--~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 190 G-----------------------LISALCPLKFPTL--QVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAA 244 (312)
T ss_dssp H-----------------------HHHHSCTTSCTTC--CEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSC
T ss_pred H-----------------------HHHHHHhccCCCC--CEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCccc
Confidence 0 11111 233333 444444444441 11233445667777777777776655
Q ss_pred C-CCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccc
Q 040702 271 P-ACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFS 338 (797)
Q Consensus 271 ~-~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 338 (797)
| ..+..+++|++|+|++|.|+.+|..+. ++|+.|++++|++++. |. +..+++|++|++++|+++
T Consensus 245 ~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 245 GAPSCDWPSQLNSLNLSFTGLKQVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CCSCCCCCTTCCEEECTTSCCSSCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred chhhhhhcCCCCEEECCCCccChhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 3 345556667777777777766666554 5666666666666644 33 555556666666666554
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4.3e-30 Score=273.49 Aligned_cols=252 Identities=20% Similarity=0.184 Sum_probs=199.7
Q ss_pred CCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCccc-ccCCcccc-------CCCCCCEEEccCC
Q 040702 16 QLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVV-GVVPTTIF-------NVSTLKSLYLHSN 87 (797)
Q Consensus 16 ~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~-~~~p~~~~-------~l~~L~~L~Ls~N 87 (797)
.++...+|++|++++|.+ .+|..+... |+.|++++|++. ...|..+. ++++|++|+|++|
T Consensus 38 ~~~~~~~L~~l~l~~n~l----------~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n 105 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE----------ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENL 105 (312)
T ss_dssp EEEEEEECTTHHHHCCTT----------CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEE
T ss_pred EEccCCCceeEeeccccc----------ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCC
Confidence 456778899999999984 456655543 889999999995 44666665 7999999999999
Q ss_pred cCcccCCCccc-cCCCCccEEEccCccccccCCchhhCC-----CCCCEEEccCCcCcccCCccccCCCCCCeeeccCcc
Q 040702 88 SLSGRLPSSAD-VRLPNLKELHLWGNNFIGTIPSFIFNA-----SKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNY 161 (797)
Q Consensus 88 ~l~~~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~ 161 (797)
++++.+|..+| ..+++|++|+|++|++++. |..+..+ ++|++|+|++|+|+++.+..|.++++|++|+|++|+
T Consensus 106 ~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 184 (312)
T 1wwl_A 106 EVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNP 184 (312)
T ss_dssp BCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCT
T ss_pred cccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCC
Confidence 99988898875 7899999999999999977 8888887 999999999999999999999999999999999999
Q ss_pred CcCC---CCCccccccCCCCCCCcEEEccCCCCCCCC---ChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhc
Q 040702 162 LTSS---TPELSSLSSLSNCKYLEYFSFSNNPLGGIL---PRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLL 235 (797)
Q Consensus 162 l~~~---~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~---~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L 235 (797)
+... +..+ .+..+++|++|+|++|+++++. ...+..++ +| ++|
T Consensus 185 l~~~~~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~-~L--------------------------~~L 233 (312)
T 1wwl_A 185 ELGERGLISAL----CPLKFPTLQVLALRNAGMETPSGVCSALAAARV-QL--------------------------QGL 233 (312)
T ss_dssp TCHHHHHHHHS----CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTC-CC--------------------------SEE
T ss_pred cCcchHHHHHH----HhccCCCCCEEECCCCcCcchHHHHHHHHhcCC-CC--------------------------CEE
Confidence 7653 2211 2478899999999999998431 12222333 33 556
Q ss_pred ccccccccCCCc-hhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCC
Q 040702 236 SLEGNQLEGSIP-DDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFT 314 (797)
Q Consensus 236 ~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~ 314 (797)
++++|++++..| ..+..+++|++|+|++|+|+. +|..+. ++|++|+|++|+|+.+|. +..+++|+.|++++|.++
T Consensus 234 ~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~--~~L~~L~Ls~N~l~~~p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 234 DLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQ-VPKGLP--AKLSVLDLSYNRLDRNPS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp ECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSS-CCSSCC--SEEEEEECCSSCCCSCCC-TTTSCEEEEEECTTCTTT
T ss_pred ECCCCcCCcccchhhhhhcCCCCEEECCCCccCh-hhhhcc--CCceEEECCCCCCCCChh-HhhCCCCCEEeccCCCCC
Confidence 666666665543 345567888899999998884 455554 789999999999988876 778899999999999887
Q ss_pred C
Q 040702 315 G 315 (797)
Q Consensus 315 ~ 315 (797)
+
T Consensus 310 ~ 310 (312)
T 1wwl_A 310 D 310 (312)
T ss_dssp C
T ss_pred C
Confidence 5
No 316
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=6.8e-28 Score=258.03 Aligned_cols=235 Identities=21% Similarity=0.211 Sum_probs=174.5
Q ss_pred CCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhh
Q 040702 149 LRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLT 228 (797)
Q Consensus 149 l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~ 228 (797)
.++++.|+|++|.++.+++. +..+++|++|+|++|.+. .+|..++.++ +|++|++++|.++ .+|..+++++
T Consensus 80 ~~~l~~L~L~~n~l~~lp~~------l~~l~~L~~L~L~~n~l~-~lp~~~~~l~-~L~~L~Ls~n~l~-~lp~~l~~l~ 150 (328)
T 4fcg_A 80 QPGRVALELRSVPLPQFPDQ------AFRLSHLQHMTIDAAGLM-ELPDTMQQFA-GLETLTLARNPLR-ALPASIASLN 150 (328)
T ss_dssp STTCCEEEEESSCCSSCCSC------GGGGTTCSEEEEESSCCC-CCCSCGGGGT-TCSEEEEESCCCC-CCCGGGGGCT
T ss_pred ccceeEEEccCCCchhcChh------hhhCCCCCEEECCCCCcc-chhHHHhccC-CCCEEECCCCccc-cCcHHHhcCc
Confidence 35677777777777766654 444666777777777776 5555666655 5555555555555 4444444444
Q ss_pred hhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEc
Q 040702 229 NLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNL 308 (797)
Q Consensus 229 ~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l 308 (797)
+| ++|++++|++.+..|..+... ..+..|.++++|++|+|++|.++.+|..+..+++|++|++
T Consensus 151 ~L--~~L~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L 213 (328)
T 4fcg_A 151 RL--RELSIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKI 213 (328)
T ss_dssp TC--CEEEEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEE
T ss_pred CC--CEEECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEc
Confidence 44 444444444444444333220 0112244588899999999999888888888889999999
Q ss_pred cCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCC
Q 040702 309 SSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGT 388 (797)
Q Consensus 309 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 388 (797)
++|.+++ +|..++.+++|++|++++|.+.+.+|..|.++++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.
T Consensus 214 ~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~ 292 (328)
T 4fcg_A 214 RNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSR 292 (328)
T ss_dssp ESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCC
T ss_pred cCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhh
Confidence 9999985 555788899999999999998888899999999999999999998889999999999999999999999999
Q ss_pred CChhhhccCCCCeEEccCCcCc
Q 040702 389 IPISLEKLLDLKDINVSFNRLE 410 (797)
Q Consensus 389 ~p~~~~~l~~L~~L~l~~N~l~ 410 (797)
+|..+.++++|+.+++..|.+.
T Consensus 293 iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 293 LPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCGGGGGSCTTCEEECCGGGSC
T ss_pred ccHHHhhccCceEEeCCHHHHH
Confidence 9999999999999999887665
No 317
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.3e-28 Score=281.69 Aligned_cols=160 Identities=18% Similarity=0.156 Sum_probs=122.3
Q ss_pred cceEEEEEEEEeccC----------CcchhHHHHHHHhhhc-cCCceeEeeeeeecCCeEEEEEEccCCCCHHHHHhcCC
Q 040702 531 DGMEVAIKVFNLQYG----------GAFKSFDIECGMMKRI-RHRNLIKIISSCSNDDFKALVLEYMPLGSLEKCLYSGN 599 (797)
Q Consensus 531 ~~~~vAvK~~~~~~~----------~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 599 (797)
-|+.||||++.+... ...++|.+|+++|+++ .|+||+++++++++++..||||||++||+|.+.+...+
T Consensus 258 fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~ 337 (569)
T 4azs_A 258 FGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGE 337 (569)
T ss_dssp ECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTC
T ss_pred ccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCC
Confidence 478899999976521 1235799999999999 69999999999999999999999999999999998765
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCccccccccccCcccccc
Q 040702 600 YILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAP 679 (797)
Q Consensus 600 ~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aP 679 (797)
. ++.. +|+.||+.||+|+| ++|||||||||+|||++.+|.+||+|||+|+...... ......+||+.||||
T Consensus 338 ~-l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~--~~~~t~vGTp~YmAP 408 (569)
T 4azs_A 338 E-IDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC--SWPTNLVQSFFVFVN 408 (569)
T ss_dssp C-CCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-----CCSHHHHHHHHHHHH
T ss_pred C-CCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC--ccccCceechhhccH
Confidence 3 6653 58999999999999 9999999999999999999999999999998764332 234557899999999
Q ss_pred cccccCccchHHHHHHHhhhh
Q 040702 680 DEIFSGEMRLKCWVNDSLLIS 700 (797)
Q Consensus 680 E~~~~~~~~~~~dv~s~~~~~ 700 (797)
|++. +.+...+|+|+.|+..
T Consensus 409 E~l~-g~~~~~~d~~s~g~~~ 428 (569)
T 4azs_A 409 ELFA-ENKSWNGFWRSAPVHP 428 (569)
T ss_dssp HHC------------------
T ss_pred HHhC-CCCCCcccccccccch
Confidence 9875 4567889999999764
No 318
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=3e-28 Score=275.06 Aligned_cols=122 Identities=19% Similarity=0.157 Sum_probs=82.4
Q ss_pred hhcccccccccCCCchhhc-CCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCC
Q 040702 233 QLLSLEGNQLEGSIPDDLC-RLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSN 311 (797)
Q Consensus 233 ~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N 311 (797)
++|+|++|.+++..|..+. .+++|+.|+|++|.+++..+ ...+++|+.|+|++|.++.+|+.+..+++|+.|++++|
T Consensus 147 ~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N 224 (487)
T 3oja_A 147 QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNN 224 (487)
T ss_dssp EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTS
T ss_pred CEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCC
Confidence 4445555555444444444 46666666676666665532 23466777777777777777666667777777777777
Q ss_pred cCCCCCCccccccccccEEeccCcccc-cccCccccCCcccceeccc
Q 040702 312 FFTGPLPLKIGNLNVLVQLDLSMNNFS-CVIPTKIGGLKDLQYLFLE 357 (797)
Q Consensus 312 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls 357 (797)
.+++ +|..+..+++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 225 ~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 225 KLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred cCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 7774 4556777778888888888877 4566778888888888886
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=8.4e-28 Score=271.39 Aligned_cols=235 Identities=20% Similarity=0.170 Sum_probs=178.1
Q ss_pred CCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCC
Q 040702 102 PNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYL 181 (797)
Q Consensus 102 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L 181 (797)
++|++|+|++|.+++..|..|..+++|++|+|++|.|++..| |.++++|++|+|++|.|+.+++ .++|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~----------~~~L 101 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV----------GPSI 101 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE----------CTTC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC----------CCCc
Confidence 366666666666666556666666666666666666665544 6666677777777776665442 1456
Q ss_pred cEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEc
Q 040702 182 EYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDL 261 (797)
Q Consensus 182 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 261 (797)
+.|++++|.+.++.+..+ ++| ++|+|++|.+++..|..|..+++|+.|+|
T Consensus 102 ~~L~L~~N~l~~~~~~~l----------------------------~~L--~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 151 (487)
T 3oja_A 102 ETLHAANNNISRVSCSRG----------------------------QGK--KNIYLANNKITMLRDLDEGCRSRVQYLDL 151 (487)
T ss_dssp CEEECCSSCCCCEEECCC----------------------------SSC--EEEECCSSCCCSGGGBCGGGGSSEEEEEC
T ss_pred CEEECcCCcCCCCCcccc----------------------------CCC--CEEECCCCCCCCCCchhhcCCCCCCEEEC
Confidence 666666666665433221 122 56666666666667777888899999999
Q ss_pred cCCcCcccCCCCcc-CCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccc
Q 040702 262 GGNKLSGFVPACSG-NLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCV 340 (797)
Q Consensus 262 s~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 340 (797)
++|.+++..|..+. .+++|+.|+|++|.|+.+|.. ..+++|+.|++++|.+++..| .|..+++|+.|++++|.+++
T Consensus 152 s~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~-~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~- 228 (487)
T 3oja_A 152 KLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ-VVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL- 228 (487)
T ss_dssp TTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECC-CCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-
T ss_pred CCCCCCCcChHHHhhhCCcccEEecCCCcccccccc-ccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-
Confidence 99999988888776 789999999999999888653 358999999999999997555 48899999999999999996
Q ss_pred cCccccCCcccceecccCcccc-CCCChhhhccccCCeeeec
Q 040702 341 IPTKIGGLKDLQYLFLEYNRLQ-GSIPNSIGDLISLKSLNLS 381 (797)
Q Consensus 341 ~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls 381 (797)
+|..+..+++|+.|++++|++. +.+|..+..++.|+.++++
T Consensus 229 lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 229 IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 5777889999999999999997 6777888889999999886
No 320
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.94 E-value=2.2e-30 Score=301.55 Aligned_cols=305 Identities=13% Similarity=0.071 Sum_probs=163.0
Q ss_pred CCCCccEEEccCcccc----ccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccC
Q 040702 100 RLPNLKELHLWGNNFI----GTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSL 175 (797)
Q Consensus 100 ~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l 175 (797)
.+++|++|+|++|.++ +.++..+.++++|++|+|++|.+.+ .+..+.++++|++|+++.+....... .....+
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~--~~~~~l 266 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMP--EKYMNL 266 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCT--TSSSCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchH--HHHHHh
Confidence 3445555555555543 1222233344555555555555543 23445555555555554322111000 011235
Q ss_pred CCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCC-hhhhhhhhhHhhhcccccccccCCCchhhcCCC
Q 040702 176 SNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIP-EEINNLTNLILQLLSLEGNQLEGSIPDDLCRLA 254 (797)
Q Consensus 176 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p-~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~ 254 (797)
..+++|+.|+++++... ..|..+..++ +|+.|++++|.+++... ..+..+++| ++|+++++......+..+..++
T Consensus 267 ~~~~~L~~L~l~~~~~~-~l~~~~~~~~-~L~~L~Ls~~~l~~~~~~~~~~~~~~L--~~L~L~~~~~~~~l~~~~~~~~ 342 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMGPN-EMPILFPFAA-QIRKLDLLYALLETEDHCTLIQKCPNL--EVLETRNVIGDRGLEVLAQYCK 342 (592)
T ss_dssp CCCTTCCEEEETTCCTT-TGGGGGGGGG-GCCEEEETTCCCCHHHHHHHHTTCTTC--CEEEEEGGGHHHHHHHHHHHCT
T ss_pred hccccccccCccccchh-HHHHHHhhcC-CCcEEecCCCcCCHHHHHHHHHhCcCC--CEEeccCccCHHHHHHHHHhCC
Confidence 55666666666665333 3455555555 67777777777654333 234556666 7777773322222333335567
Q ss_pred CCcEEEcc-----------CCcCcccC-CCCccCCccccccccCCCCCCCC-CCCCCC-CCcccEEEcc----CCcCCCC
Q 040702 255 ALFQLDLG-----------GNKLSGFV-PACSGNLTNLRKLYLGSNLLTSI-PSTLWN-LKDILHLNLS----SNFFTGP 316 (797)
Q Consensus 255 ~L~~L~Ls-----------~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~l-p~~~~~-l~~L~~L~l~----~N~l~~~ 316 (797)
+|++|+++ .|.++... +..+..+++|++|+++.|.++.- +..+.. +++|+.|+++ .|.+++.
T Consensus 343 ~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~ 422 (592)
T 3ogk_B 343 QLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDL 422 (592)
T ss_dssp TCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSC
T ss_pred CCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCc
Confidence 77777777 34554321 11233466777777766666432 223332 6677777775 5566643
Q ss_pred -----CCccccccccccEEeccCc--ccccccCcccc-CCcccceecccCccccC-CCChhhhccccCCeeeecCCcCCC
Q 040702 317 -----LPLKIGNLNVLVQLDLSMN--NFSCVIPTKIG-GLKDLQYLFLEYNRLQG-SIPNSIGDLISLKSLNLSNNNLSG 387 (797)
Q Consensus 317 -----~~~~~~~l~~L~~L~Ls~N--~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~ 387 (797)
.+..+.++++|++|++++| .+++..+..+. .+++|++|+|++|++++ .++..+..+++|++|+|++|.+++
T Consensus 423 p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 423 PLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH
T ss_pred hHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH
Confidence 2222555677777777643 25444333333 36677777777777664 233444667777777777777654
Q ss_pred C-CChhhhccCCCCeEEccCCcCcc
Q 040702 388 T-IPISLEKLLDLKDINVSFNRLEG 411 (797)
Q Consensus 388 ~-~p~~~~~l~~L~~L~l~~N~l~~ 411 (797)
. ++..+..+++|+.|++++|+++.
T Consensus 503 ~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 503 RAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred HHHHHHHHhcCccCeeECcCCcCCH
Confidence 3 33344567777777777777654
No 321
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.94 E-value=3.3e-29 Score=291.63 Aligned_cols=408 Identities=14% Similarity=0.071 Sum_probs=298.3
Q ss_pred CCcCCCCCCCCCEEeCCCCCCC---CcCCCccccC----CCccccCCCCCCEEEcccCcccccCCccccCC--CCCCEEE
Q 040702 13 ILSQLGNPSSLQTLYLSYNPPS---GSIPSFILCE----IPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNV--STLKSLY 83 (797)
Q Consensus 13 ~~~~~~~l~~L~~LdLs~N~~~---~~~p~~~l~~----ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l--~~L~~L~ 83 (797)
++..+..+++|++|+|+++... +.+|...-.. ++.....+++|++|+|++|.+++..+..+... .+|++|+
T Consensus 65 ~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~ 144 (592)
T 3ogk_B 65 PDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLK 144 (592)
T ss_dssp HHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEE
T ss_pred hHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEE
Confidence 3445677888999999986521 1222111000 11112278999999999999988777777664 4599999
Q ss_pred ccCCc-Ccc-cCCCccccCCCCccEEEccCcccccc----CCchhhCCCCCCEEEccCCcCccc----CCccccCCCCCC
Q 040702 84 LHSNS-LSG-RLPSSADVRLPNLKELHLWGNNFIGT----IPSFIFNASKLSELGLQKNSFSGS----IPNTFGNLRNLK 153 (797)
Q Consensus 84 Ls~N~-l~~-~l~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~f~~l~~L~ 153 (797)
|++|. ++. .++ .....+++|++|+|++|.+++. ++..+..+++|++|+|++|.++++ .+..+.++++|+
T Consensus 145 L~~~~~~~~~~l~-~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~ 223 (592)
T 3ogk_B 145 LDKCSGFTTDGLL-SIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223 (592)
T ss_dssp EESCEEEEHHHHH-HHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCC
T ss_pred CcCCCCcCHHHHH-HHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCc
Confidence 99987 321 111 1224689999999999998765 334567789999999999999844 345567899999
Q ss_pred eeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCC---CCCChhhhccccCCcEEEccCCcccccCChhhhhhhhh
Q 040702 154 WLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLG---GILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNL 230 (797)
Q Consensus 154 ~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~---~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L 230 (797)
+|+|++|.+..++. .+..+++|+.|+++.+... ...+..+..++ +|+.|.++++.. +.+|..+..+++|
T Consensus 224 ~L~L~~~~~~~l~~------~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~-~L~~L~l~~~~~-~~l~~~~~~~~~L 295 (592)
T 3ogk_B 224 SVKVGDFEILELVG------FFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPR-KLCRLGLSYMGP-NEMPILFPFAAQI 295 (592)
T ss_dssp EEECSSCBGGGGHH------HHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCT-TCCEEEETTCCT-TTGGGGGGGGGGC
T ss_pred EEeccCccHHHHHH------HHhhhhHHHhhcccccccccchHHHHHHhhccc-cccccCccccch-hHHHHHHhhcCCC
Confidence 99999999988663 3677889999999864433 22334555665 899999988643 4677888889988
Q ss_pred HhhhcccccccccCCCc-hhhcCCCCCcEEEccCCcCcc-cCCCCccCCccccccccC-----------CCCCCC--CCC
Q 040702 231 ILQLLSLEGNQLEGSIP-DDLCRLAALFQLDLGGNKLSG-FVPACSGNLTNLRKLYLG-----------SNLLTS--IPS 295 (797)
Q Consensus 231 ~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~-----------~N~l~~--lp~ 295 (797)
++|+|++|.+++... ..+..+++|++|+++ |.+.. ..+..+..+++|++|+++ .|.++. ++.
T Consensus 296 --~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~ 372 (592)
T 3ogk_B 296 --RKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIA 372 (592)
T ss_dssp --CEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHH
T ss_pred --cEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHH
Confidence 999999999764433 346789999999999 54443 233344678899999999 356643 222
Q ss_pred CCCCCCcccEEEccCCcCCCCCCccccc-cccccEEecc----Ccccccc-----cCccccCCcccceecccCc--cccC
Q 040702 296 TLWNLKDILHLNLSSNFFTGPLPLKIGN-LNVLVQLDLS----MNNFSCV-----IPTKIGGLKDLQYLFLEYN--RLQG 363 (797)
Q Consensus 296 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~L~Ls----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N--~l~~ 363 (797)
....+++|+.|+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|+.|+++++ .+++
T Consensus 373 l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~ 452 (592)
T 3ogk_B 373 LAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTD 452 (592)
T ss_dssp HHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCH
T ss_pred HHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccH
Confidence 2345889999999999998766666665 8899999996 6788753 3344677999999999854 3665
Q ss_pred CCChhhhc-cccCCeeeecCCcCCC-CCChhhhccCCCCeEEccCCcCcccC-CC-CCCCCCCCcccccCCcc
Q 040702 364 SIPNSIGD-LISLKSLNLSNNNLSG-TIPISLEKLLDLKDINVSFNRLEGEI-PR-EGPFRNLSAESFKGNEL 432 (797)
Q Consensus 364 ~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~-p~-~~~~~~l~~~~~~~n~~ 432 (797)
..+..+.. +++|++|+|++|.+++ .++..+..+++|+.|++++|++++.. +. ...++.++.+++++|..
T Consensus 453 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~i 525 (592)
T 3ogk_B 453 LGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRA 525 (592)
T ss_dssp HHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBC
T ss_pred HHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcC
Confidence 55555554 8899999999999986 34556688999999999999986542 22 13467888999999974
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=1.2e-25 Score=234.79 Aligned_cols=208 Identities=25% Similarity=0.284 Sum_probs=100.8
Q ss_pred CCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeec
Q 040702 78 TLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGL 157 (797)
Q Consensus 78 ~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L 157 (797)
+|++|+|++|+++ .++...|..+++|++|+|++|++++..+..|.++++|++|+|++|+|+++.+.+|.++++|++|++
T Consensus 29 ~l~~L~ls~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCC-EECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCccc-ccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 3444444444443 333333334444444444444444333444444444444444444444444444455555555555
Q ss_pred cCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCC-CChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcc
Q 040702 158 NDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGI-LPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLS 236 (797)
Q Consensus 158 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~ 236 (797)
++|.++.+++. .+..+++|++|++++|++.+. .|..|..++ +|+.|++++|.+++..+..+..+++| +.|.
T Consensus 108 ~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L--~~l~ 179 (276)
T 2z62_A 108 VETNLASLENF-----PIGHLKTLKELNVAHNLIQSFKLPEYFSNLT-NLEHLDLSSNKIQSIYCTDLRVLHQM--PLLN 179 (276)
T ss_dssp TTSCCCCSTTC-----CCTTCTTCCEEECCSSCCCCCCCCGGGGGCT-TCCEEECCSSCCCEECGGGGHHHHTC--TTCC
T ss_pred CCCCccccCch-----hcccCCCCCEEECcCCccceecCchhhccCC-CCCEEECCCCCCCcCCHHHhhhhhhc--cccc
Confidence 55555444432 244445555555555555443 245555554 55555555555555445555554444 3111
Q ss_pred cccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCC-CCCCCcccEEEccCCcCCC
Q 040702 237 LEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPST-LWNLKDILHLNLSSNFFTG 315 (797)
Q Consensus 237 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~l~~N~l~~ 315 (797)
+ .|++++|+++++.+..+... +|+.|+|++|.++.+|.. +..+++|+.|++++|.+..
T Consensus 180 l--------------------~L~ls~n~l~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 180 L--------------------SLDLSLNPMNFIQPGAFKEI-RLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp E--------------------EEECCSSCCCEECTTSSCSC-CEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred e--------------------eeecCCCcccccCccccCCC-cccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 1 45555555554444444332 566666666666555543 3446666666666666653
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=6.8e-26 Score=236.70 Aligned_cols=213 Identities=23% Similarity=0.272 Sum_probs=165.9
Q ss_pred ccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCch
Q 040702 42 LCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSF 121 (797)
Q Consensus 42 l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 121 (797)
+.++|..+. ++|++|++++|+++++.+..|.++++|++|+|++|+++ .++...|..+++|++|+|++|++++..+..
T Consensus 19 l~~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 95 (276)
T 2z62_A 19 FYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGA 95 (276)
T ss_dssp CSSCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTT
T ss_pred ccccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCC-ccCHHHccCCcCCCEEECCCCccCccChhh
Confidence 456676664 57999999999999988889999999999999999998 777777889999999999999999888889
Q ss_pred hhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCC-CCccccccCCCCCCCcEEEccCCCCCCCCChhhh
Q 040702 122 IFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSST-PELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIG 200 (797)
Q Consensus 122 ~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~-~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 200 (797)
|.++++|++|++++|+++++.+..|.++++|++|+|++|.++.+. +. .|.++++|+.|++++|+++++.+..|.
T Consensus 96 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~-----~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 170 (276)
T 2z62_A 96 FSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE-----YFSNLTNLEHLDLSSNKIQSIYCTDLR 170 (276)
T ss_dssp TTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG-----GGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred hcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCch-----hhccCCCCCEEECCCCCCCcCCHHHhh
Confidence 999999999999999999888888999999999999999998853 32 377889999999999999988888888
Q ss_pred ccccCCc----EEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccC
Q 040702 201 NLSQSME----DFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGN 276 (797)
Q Consensus 201 ~l~~~L~----~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (797)
.+. +++ .|++++|.+++..+.. +.. .+|+.|+|++|+++++.+..|..
T Consensus 171 ~l~-~L~~l~l~L~ls~n~l~~~~~~~--------------------------~~~-~~L~~L~L~~n~l~~~~~~~~~~ 222 (276)
T 2z62_A 171 VLH-QMPLLNLSLDLSLNPMNFIQPGA--------------------------FKE-IRLKELALDTNQLKSVPDGIFDR 222 (276)
T ss_dssp HHH-TCTTCCEEEECCSSCCCEECTTS--------------------------SCS-CCEEEEECCSSCCSCCCTTTTTT
T ss_pred hhh-hccccceeeecCCCcccccCccc--------------------------cCC-CcccEEECCCCceeecCHhHhcc
Confidence 776 565 5556665555433333 222 24555555555555544444555
Q ss_pred CccccccccCCCCC
Q 040702 277 LTNLRKLYLGSNLL 290 (797)
Q Consensus 277 l~~L~~L~L~~N~l 290 (797)
+++|+.|++++|.+
T Consensus 223 l~~L~~L~l~~N~~ 236 (276)
T 2z62_A 223 LTSLQKIWLHTNPW 236 (276)
T ss_dssp CCSCCEEECCSSCB
T ss_pred cccccEEEccCCcc
Confidence 55555555555555
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.7e-25 Score=232.76 Aligned_cols=203 Identities=24% Similarity=0.302 Sum_probs=155.3
Q ss_pred CCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccC
Q 040702 21 SSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVR 100 (797)
Q Consensus 21 ~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~ 100 (797)
.+.+++|+++|++ +.+|..+. ++++.|++++|+++++.+.+|.++++|++|+|++|+|+ .+|..+|..
T Consensus 16 ~~~~~l~~~~~~l---------~~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~ 83 (270)
T 2o6q_A 16 NNKNSVDCSSKKL---------TAIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKE 83 (270)
T ss_dssp TTTTEEECTTSCC---------SSCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSS
T ss_pred CCCCEEEccCCCC---------CccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcC
Confidence 3577888988884 34555444 57888889988888887778888888999999888887 788888888
Q ss_pred CCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCC
Q 040702 101 LPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKY 180 (797)
Q Consensus 101 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~ 180 (797)
+++|++|+|++|++++..+..|.++++|++|+|++|+|+.+.+..|.++++|++|+|++|.|+.+++. .|..+++
T Consensus 84 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-----~~~~l~~ 158 (270)
T 2o6q_A 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKG-----VFDKLTS 158 (270)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTT
T ss_pred CCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHh-----HccCCcc
Confidence 88888888888888877777788888888888888888888888888888888888888888887765 3777788
Q ss_pred CcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEE
Q 040702 181 LEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLD 260 (797)
Q Consensus 181 L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 260 (797)
|+.|+|++|+++++.+..|..++ +|+.|+++ +|+++++.+..|..+++|+.|+
T Consensus 159 L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~--------------------------~N~l~~~~~~~~~~l~~L~~L~ 211 (270)
T 2o6q_A 159 LKELRLYNNQLKRVPEGAFDKLT-ELKTLKLD--------------------------NNQLKRVPEGAFDSLEKLKMLQ 211 (270)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCT-TCCEEECC--------------------------SSCCSCCCTTTTTTCTTCCEEE
T ss_pred cceeEecCCcCcEeChhHhccCC-CcCEEECC--------------------------CCcCCcCCHHHhccccCCCEEE
Confidence 88888888888877666666665 45554444 4444444445556666667777
Q ss_pred ccCCcCc
Q 040702 261 LGGNKLS 267 (797)
Q Consensus 261 Ls~N~l~ 267 (797)
|++|.+.
T Consensus 212 l~~N~~~ 218 (270)
T 2o6q_A 212 LQENPWD 218 (270)
T ss_dssp CCSSCBC
T ss_pred ecCCCee
Confidence 7777664
No 325
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.9e-25 Score=232.61 Aligned_cols=220 Identities=21% Similarity=0.284 Sum_probs=176.7
Q ss_pred CCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 040702 5 TNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYL 84 (797)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~L 84 (797)
.++.+.+.+ .+..+++|+.|++++|.++ .++ .+..+++|++|++++|+++++ ..+.++++|++|+|
T Consensus 27 ~~~~~~~~~--~~~~l~~L~~L~l~~~~i~---------~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 27 KKKSVTDAV--TQNELNSIDQIIANNSDIK---------SVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLIL 92 (272)
T ss_dssp TCSCTTSEE--CHHHHTTCCEEECTTSCCC---------CCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEEC
T ss_pred cCccccccc--ccccccceeeeeeCCCCcc---------ccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEEC
Confidence 344444443 3667888999999998843 232 477888999999999998873 47888899999999
Q ss_pred cCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcC
Q 040702 85 HSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTS 164 (797)
Q Consensus 85 s~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~ 164 (797)
++|.++ .++...|..+++|++|+|++|++++..+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+++.
T Consensus 93 ~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 93 TGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp TTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCccC-ccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 999998 7777777788999999999999987777788889999999999999998888888899999999999999988
Q ss_pred CCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccC
Q 040702 165 STPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEG 244 (797)
Q Consensus 165 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~ 244 (797)
+++. .|..+++|+.|++++|+++++.+..|..++ +|+.|++++|.+.+..| ++ ++|+++.|.+.+
T Consensus 172 ~~~~-----~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~~~~~~~-------~l--~~l~~~~n~~~g 236 (272)
T 3rfs_A 172 LPEG-----VFDKLTQLKDLRLYQNQLKSVPDGVFDRLT-SLQYIWLHDNPWDCTCP-------GI--RYLSEWINKHSG 236 (272)
T ss_dssp CCTT-----TTTTCTTCCEEECCSSCCSCCCTTTTTTCT-TCCEEECCSSCBCCCTT-------TT--HHHHHHHHHTGG
T ss_pred cCHH-----HhcCCccCCEEECCCCcCCccCHHHHhCCc-CCCEEEccCCCccccCc-------HH--HHHHHHHHhCCC
Confidence 8775 377888899999999999988888888887 78888888888876544 33 777888888887
Q ss_pred CCchhhcCCC
Q 040702 245 SIPDDLCRLA 254 (797)
Q Consensus 245 ~~~~~~~~l~ 254 (797)
.+|.+++.+.
T Consensus 237 ~ip~~~~~~~ 246 (272)
T 3rfs_A 237 VVRNSAGSVA 246 (272)
T ss_dssp GBBCTTSCBC
T ss_pred cccCcccccC
Confidence 7777766554
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=6.2e-25 Score=228.49 Aligned_cols=200 Identities=26% Similarity=0.300 Sum_probs=103.3
Q ss_pred CCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeecc
Q 040702 79 LKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLN 158 (797)
Q Consensus 79 L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~ 158 (797)
.+.+++++|.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+|+.+.+..|.++++|++|+|+
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP---ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCEEEccCCCCC-ccCCCCC---CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 444555555554 4444332 345555555555554444445555555555555555555555555555555555555
Q ss_pred CccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccc
Q 040702 159 DNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLE 238 (797)
Q Consensus 159 ~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls 238 (797)
+|.++.+++. .|.++++|++|++++|+++++.+..|..++ +|+. |+|+
T Consensus 94 ~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~--------------------------L~Ls 141 (270)
T 2o6q_A 94 DNKLQALPIG-----VFDQLVNLAELRLDRNQLKSLPPRVFDSLT-KLTY--------------------------LSLG 141 (270)
T ss_dssp SSCCCCCCTT-----TTTTCSSCCEEECCSSCCCCCCTTTTTTCT-TCCE--------------------------EECC
T ss_pred CCcCCcCCHh-----HcccccCCCEEECCCCccCeeCHHHhCcCc-CCCE--------------------------EECC
Confidence 5555555443 244455555555555555544444444443 3333 3333
Q ss_pred cccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCC-CCCCCcccEEEccCCcCC
Q 040702 239 GNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPST-LWNLKDILHLNLSSNFFT 314 (797)
Q Consensus 239 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~l~~N~l~ 314 (797)
+|.++++.+..|..+++|++|+|++|+++++.+..|..+++|+.|+|++|.++.+|.. +..+++|+.|++++|.+.
T Consensus 142 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 142 YNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 3333333334445555555666666666555555555666666666666666555543 445666666666666665
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=6.4e-25 Score=230.52 Aligned_cols=203 Identities=24% Similarity=0.254 Sum_probs=139.5
Q ss_pred ccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCC
Q 040702 73 IFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNL 152 (797)
Q Consensus 73 ~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L 152 (797)
+.++++++++++++|.++ .+|..++ +++++|+|++|++++..+..|.++++|++|+|++|+|+++.+. ..+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 556777777777777777 6776654 5777888888887777777777788888888888887765443 677778
Q ss_pred CeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHh
Q 040702 153 KWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLIL 232 (797)
Q Consensus 153 ~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L 232 (797)
++|+|++|.|+.++.. +..+++|++|++++|+|+++.+..|.+++ +|
T Consensus 80 ~~L~Ls~N~l~~l~~~------~~~l~~L~~L~l~~N~l~~l~~~~~~~l~-~L-------------------------- 126 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLL------GQTLPALTVLDVSFNRLTSLPLGALRGLG-EL-------------------------- 126 (290)
T ss_dssp CEEECCSSCCSSCCCC------TTTCTTCCEEECCSSCCCCCCSSTTTTCT-TC--------------------------
T ss_pred CEEECCCCcCCcCchh------hccCCCCCEEECCCCcCcccCHHHHcCCC-CC--------------------------
Confidence 8888888877766653 55666777777777777766555555544 33
Q ss_pred hhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCc
Q 040702 233 QLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNF 312 (797)
Q Consensus 233 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~ 312 (797)
++|+|++|+++++.+..|..+++|+.|+|++|+|+.+.+..|..+++|+.|+|++|+|+.+|..++...+|+.|++++|.
T Consensus 127 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np 206 (290)
T 1p9a_G 127 QELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNP 206 (290)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCC
T ss_pred CEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCC
Confidence 44444445555455555666777777777777777666666677777777777777777777766666666666666665
Q ss_pred CC
Q 040702 313 FT 314 (797)
Q Consensus 313 l~ 314 (797)
+.
T Consensus 207 ~~ 208 (290)
T 1p9a_G 207 WL 208 (290)
T ss_dssp BC
T ss_pred cc
Confidence 54
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=4.7e-25 Score=231.51 Aligned_cols=203 Identities=21% Similarity=0.244 Sum_probs=168.6
Q ss_pred CCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCc
Q 040702 17 LGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSS 96 (797)
Q Consensus 17 ~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~ 96 (797)
+..+++++++++++|.+ +++|..+. ++++.|++++|+++++.|..|.++++|++|+|++|.|+ .++..
T Consensus 6 ~~~l~~l~~l~~~~~~l---------~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~ 73 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNL---------TALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD 73 (290)
T ss_dssp EECSTTCCEEECTTSCC---------SSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECC
T ss_pred ccccCCccEEECCCCCC---------CcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccC-cccCC
Confidence 67889999999999984 45566554 68999999999999999999999999999999999998 56554
Q ss_pred cccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCC
Q 040702 97 ADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLS 176 (797)
Q Consensus 97 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~ 176 (797)
..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|+++.+++|.++++|++|+|++|+|+.+++.. |.
T Consensus 74 --~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~-----~~ 145 (290)
T 1p9a_G 74 --GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGL-----LT 145 (290)
T ss_dssp --SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTT-----TT
T ss_pred --CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhh-----cc
Confidence 57899999999999998 67888899999999999999999998999999999999999999999988763 78
Q ss_pred CCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCC
Q 040702 177 NCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAAL 256 (797)
Q Consensus 177 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L 256 (797)
.+++|+.|+|++|+|+++.+..|..++ +|+.|++++|.++ .+|..+..+.+|
T Consensus 146 ~l~~L~~L~L~~N~l~~l~~~~~~~l~-~L~~L~L~~N~l~---------------------------~ip~~~~~~~~L 197 (290)
T 1p9a_G 146 PTPKLEKLSLANNNLTELPAGLLNGLE-NLDTLLLQENSLY---------------------------TIPKGFFGSHLL 197 (290)
T ss_dssp TCTTCCEEECTTSCCSCCCTTTTTTCT-TCCEEECCSSCCC---------------------------CCCTTTTTTCCC
T ss_pred cccCCCEEECCCCcCCccCHHHhcCcC-CCCEEECCCCcCC---------------------------ccChhhcccccC
Confidence 889999999999999988777777776 5666665555554 234444555567
Q ss_pred cEEEccCCcCc
Q 040702 257 FQLDLGGNKLS 267 (797)
Q Consensus 257 ~~L~Ls~N~l~ 267 (797)
+.|+|++|.+.
T Consensus 198 ~~l~L~~Np~~ 208 (290)
T 1p9a_G 198 PFAFLHGNPWL 208 (290)
T ss_dssp SEEECCSCCBC
T ss_pred CeEEeCCCCcc
Confidence 77777777664
No 329
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.92 E-value=6.6e-25 Score=237.35 Aligned_cols=221 Identities=19% Similarity=0.196 Sum_probs=106.3
Q ss_pred CCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCC-chhhCCCCCCE-EEccCCcCcccCCccccCCCCCCee
Q 040702 78 TLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIP-SFIFNASKLSE-LGLQKNSFSGSIPNTFGNLRNLKWL 155 (797)
Q Consensus 78 ~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~-L~L~~N~l~~~~~~~f~~l~~L~~L 155 (797)
++++|+|++|+|+ .+|..+|.++++|++|+|++|++.+.+| .+|.++++|++ +.++.|+|+.+.|++|.++++|++|
T Consensus 31 ~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 31 NAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 4444444444444 4444444444444444444444433222 23444444332 3334455555555555555555555
Q ss_pred eccCccCcCCCCCccccccCCCCCCCcEEEccC-CCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhh
Q 040702 156 GLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSN-NPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQL 234 (797)
Q Consensus 156 ~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~ 234 (797)
++++|+|+.+++. .+....++..|++.+ |++..+.+..|..+...++.|++++|.|+.+.+..|. ..+| +.
T Consensus 110 ~l~~n~l~~~~~~-----~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~-~~~L--~~ 181 (350)
T 4ay9_X 110 LISNTGIKHLPDV-----HKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFN-GTQL--DE 181 (350)
T ss_dssp EEEEECCSSCCCC-----TTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSST-TEEE--EE
T ss_pred cccccccccCCch-----hhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhcc-ccch--hH
Confidence 5555555554432 133334455555533 3454444444544443444455555444432222222 1222 45
Q ss_pred cccc-cccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccC
Q 040702 235 LSLE-GNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSS 310 (797)
Q Consensus 235 L~Ls-~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~ 310 (797)
|+++ +|.++.+.+++|..+++|++|||++|+|+.+++..|.++++|+.+++ +.++.+|. +..+++|+.+++++
T Consensus 182 l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~~lP~-l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 182 LNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLPT-LEKLVALMEASLTY 255 (350)
T ss_dssp EECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCCCCCC-TTTCCSCCEEECSC
T ss_pred HhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcCcCCC-chhCcChhhCcCCC
Confidence 5554 34555445555666666666666666666655555555555555443 33455552 44455555555543
No 330
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=6.3e-26 Score=258.18 Aligned_cols=178 Identities=17% Similarity=0.134 Sum_probs=135.2
Q ss_pred cCCCccccccccCCcceeec---ceEEEEEEEEeccCC--------cchhHHHHHHHhhhccCCceeEeeeeeecCCeEE
Q 040702 512 NRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGG--------AFKSFDIECGMMKRIRHRNLIKIISSCSNDDFKA 580 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~--------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 580 (797)
..+...+.||+|+||.||++ +..+|+|........ ..+.+.+|++++++++||||+++..++...+..|
T Consensus 336 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 415 (540)
T 3en9_A 336 KRKIPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKR 415 (540)
T ss_dssp ------------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTE
T ss_pred ccCCCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccE
Confidence 33345679999999999975 578899987543211 1245789999999999999997666666777789
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCc
Q 040702 581 LVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLE 660 (797)
Q Consensus 581 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~ 660 (797)
+||||+++|+|.+++.. +..++.|+++||+||| +++|+||||||+|||++. .+||+|||+|+....
T Consensus 416 lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999999865 4589999999999999 999999999999999998 999999999997644
Q ss_pred cCccc-----cccccccCccccccccccc--CccchHHHHHHHhhhhhhh
Q 040702 661 EDQSL-----TQTQTLATIGYMAPDEIFS--GEMRLKCWVNDSLLISVMI 703 (797)
Q Consensus 661 ~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~dv~s~~~~~~~~ 703 (797)
..... ......||+.|||||.+.. ..|+..+|+|+.....+.+
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~ 531 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKD 531 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHH
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 32211 1245689999999998876 6678888889887665443
No 331
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=4e-28 Score=282.59 Aligned_cols=372 Identities=14% Similarity=0.108 Sum_probs=218.1
Q ss_pred CCCCCCCEEeCCCCCCCCcCCCccccCCCcccc-CCCCCCEEEcccC-ccccc-CCccccCCCCCCEEEccCCcCcccCC
Q 040702 18 GNPSSLQTLYLSYNPPSGSIPSFILCEIPHEID-NLHNMEWMAFSFN-KVVGV-VPTTIFNVSTLKSLYLHSNSLSGRLP 94 (797)
Q Consensus 18 ~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~-~l~~L~~L~ls~N-~i~~~-~p~~~~~l~~L~~L~Ls~N~l~~~l~ 94 (797)
..+++|++|+|++|.+++..+ ..+. .+++|+.|++++| .++.. ++..+.++++|++|+|++|.+++..+
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~--------~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~ 173 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCL--------ELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSG 173 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHH--------HHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCG
T ss_pred HhCCCCCeEEeeCcEEcHHHH--------HHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcch
Confidence 467899999999998654432 2333 5789999999999 55543 44455589999999999999873222
Q ss_pred C---ccccCCCCccEEEccCcc--ccc-cCCchhhCCCCCCEEEccCC-cCcccCCccccCCCCCCeeeccCcc------
Q 040702 95 S---SADVRLPNLKELHLWGNN--FIG-TIPSFIFNASKLSELGLQKN-SFSGSIPNTFGNLRNLKWLGLNDNY------ 161 (797)
Q Consensus 95 ~---~~~~~l~~L~~L~L~~N~--l~~-~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~f~~l~~L~~L~L~~N~------ 161 (797)
. .....+++|++|+|++|. +.. .++..+..+++|++|+|++| .+.+ .+..+..+++|++|+++.+.
T Consensus 174 ~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~ 252 (594)
T 2p1m_B 174 HWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPD 252 (594)
T ss_dssp GGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHH
T ss_pred HHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchh
Confidence 1 122367899999999997 321 11222345799999999998 4554 67788899999999965543
Q ss_pred -CcCCCCCccccccCCCCCCCcEE-EccCCCCCCCCChhhhccccCCcEEEccCCcccccCCh-hhhhhhhhHhhhcccc
Q 040702 162 -LTSSTPELSSLSSLSNCKYLEYF-SFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPE-EINNLTNLILQLLSLE 238 (797)
Q Consensus 162 -l~~~~~~~~~~~~l~~l~~L~~L-~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~-~~~~l~~L~L~~L~Ls 238 (797)
+..++. .+.++++|+.| .+.+... ...+..+..++ +|+.|++++|.++..... .+..+++| ++|+++
T Consensus 253 ~~~~l~~------~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~-~L~~L~L~~~~l~~~~l~~~~~~~~~L--~~L~l~ 322 (594)
T 2p1m_B 253 VYSGLSV------ALSGCKELRCLSGFWDAVP-AYLPAVYSVCS-RLTTLNLSYATVQSYDLVKLLCQCPKL--QRLWVL 322 (594)
T ss_dssp HHHHHHH------HHHTCTTCCEEECCBTCCG-GGGGGGHHHHT-TCCEEECTTCCCCHHHHHHHHTTCTTC--CEEEEE
T ss_pred hHHHHHH------HHhcCCCcccccCCcccch-hhHHHHHHhhC-CCCEEEccCCCCCHHHHHHHHhcCCCc--CEEeCc
Confidence 333222 24556666666 3333222 12233333444 677777777665532222 23345555 667776
Q ss_pred cccccCC-CchhhcCCCCCcEEEccC---------CcCcccCCCCc-cCCccccccccCCCCCCCC-CCCCC-CCCcccE
Q 040702 239 GNQLEGS-IPDDLCRLAALFQLDLGG---------NKLSGFVPACS-GNLTNLRKLYLGSNLLTSI-PSTLW-NLKDILH 305 (797)
Q Consensus 239 ~N~l~~~-~~~~~~~l~~L~~L~Ls~---------N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~l-p~~~~-~l~~L~~ 305 (797)
+| +... .+.....+++|++|++++ +.+++.....+ .++++|+.|+++.|.++.. +..+. .+++|+.
T Consensus 323 ~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~ 401 (594)
T 2p1m_B 323 DY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTR 401 (594)
T ss_dssp GG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCE
T ss_pred Cc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcce
Confidence 66 3311 111222466677776632 34432221122 2356677776666666432 11222 3566777
Q ss_pred EEcc--C----CcCCCCCC-----ccccccccccEEeccCcccccccCccccC-CcccceecccCccccCCCChhh-hcc
Q 040702 306 LNLS--S----NFFTGPLP-----LKIGNLNVLVQLDLSMNNFSCVIPTKIGG-LKDLQYLFLEYNRLQGSIPNSI-GDL 372 (797)
Q Consensus 306 L~l~--~----N~l~~~~~-----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l 372 (797)
|+++ + |.++.... ..+..+++|+.|++++ .++...+..+.. +++|+.|+|++|.+++..+..+ ..+
T Consensus 402 L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~ 480 (594)
T 2p1m_B 402 FRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGC 480 (594)
T ss_dssp EEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHC
T ss_pred eEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcC
Confidence 7776 3 44442111 1144566777777766 554443344433 6667777777777655444444 556
Q ss_pred ccCCeeeecCCcCCCCCCh-hhhccCCCCeEEccCCcCc
Q 040702 373 ISLKSLNLSNNNLSGTIPI-SLEKLLDLKDINVSFNRLE 410 (797)
Q Consensus 373 ~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~ 410 (797)
++|++|+|++|.+++.... ....+++|+.|++++|+++
T Consensus 481 ~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 481 DSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp TTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred CCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 7777777777777543333 2344667777777777663
No 332
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=1.2e-23 Score=216.25 Aligned_cols=183 Identities=21% Similarity=0.195 Sum_probs=162.1
Q ss_pred CCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccC
Q 040702 21 SSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVR 100 (797)
Q Consensus 21 ~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~ 100 (797)
.+.+++|+++|. ++++|..+. ++++.|++++|++.++.+..|.++++|++|+|++|+|+ .++...|..
T Consensus 14 ~~~~~l~~~~~~---------l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~ 81 (251)
T 3m19_A 14 EGKKEVDCQGKS---------LDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDD 81 (251)
T ss_dssp GGGTEEECTTCC---------CSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTT
T ss_pred CCCeEEecCCCC---------ccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC-ccCHhHhcc
Confidence 467889999998 445666655 58999999999999999999999999999999999998 677777789
Q ss_pred CCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCC
Q 040702 101 LPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKY 180 (797)
Q Consensus 101 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~ 180 (797)
+++|++|+|++|++++..+..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|+|+.+++. .|..+++
T Consensus 82 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-----~~~~l~~ 156 (251)
T 3m19_A 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAG-----AFDKLTN 156 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTT
T ss_pred CCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHH-----HcCcCcC
Confidence 99999999999999988888899999999999999999999888999999999999999999998875 4888999
Q ss_pred CcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCC
Q 040702 181 LEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIP 221 (797)
Q Consensus 181 L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p 221 (797)
|+.|+|++|+++++.+..|..++ +|+.|++++|.+.....
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLG-KLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCT-TCCEEECCSCCBCTTST
T ss_pred CCEEECCCCcCCccCHHHHhCCC-CCCEEEeeCCceeCCcc
Confidence 99999999999998888898887 89999999999986533
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=2.4e-24 Score=219.72 Aligned_cols=196 Identities=16% Similarity=0.222 Sum_probs=110.8
Q ss_pred CCCEEEcccCcccccCCccccCCCCCCEEEccCCc-CcccCCCccccCCCCccEEEccC-ccccccCCchhhCCCCCCEE
Q 040702 54 NMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNS-LSGRLPSSADVRLPNLKELHLWG-NNFIGTIPSFIFNASKLSEL 131 (797)
Q Consensus 54 ~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~-l~~~l~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L 131 (797)
++++|++++|+++++.+.+|.++++|++|+|++|+ ++ .++...|..+++|++|+|++ |++++..+..|.++++|++|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 55566666666655555555555556666665554 54 45555555555555555555 55554444555555555555
Q ss_pred EccCCcCcccCCccccCCCCCC---eeeccCc-cCcCCCCCccccccCCCCCCCc-EEEccCCCCCCCCChhhhccccCC
Q 040702 132 GLQKNSFSGSIPNTFGNLRNLK---WLGLNDN-YLTSSTPELSSLSSLSNCKYLE-YFSFSNNPLGGILPRAIGNLSQSM 206 (797)
Q Consensus 132 ~L~~N~l~~~~~~~f~~l~~L~---~L~L~~N-~l~~~~~~~~~~~~l~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~~L 206 (797)
+|++|+|+++ |. |.++++|+ +|++++| .++.+++. .|.++++|+ .|++++|+++.+.+..|.
T Consensus 111 ~l~~n~l~~l-p~-~~~l~~L~~L~~L~l~~N~~l~~i~~~-----~~~~l~~L~~~L~l~~n~l~~i~~~~~~------ 177 (239)
T 2xwt_C 111 GIFNTGLKMF-PD-LTKVYSTDIFFILEITDNPYMTSIPVN-----AFQGLCNETLTLKLYNNGFTSVQGYAFN------ 177 (239)
T ss_dssp EEEEECCCSC-CC-CTTCCBCCSEEEEEEESCTTCCEECTT-----TTTTTBSSEEEEECCSCCCCEECTTTTT------
T ss_pred eCCCCCCccc-cc-cccccccccccEEECCCCcchhhcCcc-----cccchhcceeEEEcCCCCCcccCHhhcC------
Confidence 5555555542 22 55555555 5555555 55554443 244455555 555555555433333332
Q ss_pred cEEEccCCcccccCChhhhhhhhhHhhhccccccc-ccCCCchhhcCC-CCCcEEEccCCcCcccCCCCccCCccccccc
Q 040702 207 EDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQ-LEGSIPDDLCRL-AALFQLDLGGNKLSGFVPACSGNLTNLRKLY 284 (797)
Q Consensus 207 ~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 284 (797)
. ++| ++|++++|+ ++++.+..|..+ ++|+.|++++|+++++.+. .+++|+.|+
T Consensus 178 -------------------~-~~L--~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~ 232 (239)
T 2xwt_C 178 -------------------G-TKL--DAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELI 232 (239)
T ss_dssp -------------------T-CEE--EEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEE
T ss_pred -------------------C-CCC--CEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceee
Confidence 2 333 666666663 666666677777 7788888888888765444 456677777
Q ss_pred cCCC
Q 040702 285 LGSN 288 (797)
Q Consensus 285 L~~N 288 (797)
++++
T Consensus 233 l~~~ 236 (239)
T 2xwt_C 233 ARNT 236 (239)
T ss_dssp CTTC
T ss_pred ccCc
Confidence 7665
No 334
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.1e-24 Score=224.70 Aligned_cols=227 Identities=22% Similarity=0.251 Sum_probs=113.3
Q ss_pred CCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCC
Q 040702 102 PNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYL 181 (797)
Q Consensus 102 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L 181 (797)
.++..+++.++.+.+. ..+..+++|++|++++|.++.+ ..+..+++|++|+|++|.++.++ .+..+++|
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~~-------~l~~l~~L 87 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDIS-------ALKELTNL 87 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCCG-------GGTTCTTC
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCch-------hhcCCCCC
Confidence 4455566666665543 2345566677777777766643 23666666666666666665532 24555566
Q ss_pred cEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEc
Q 040702 182 EYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDL 261 (797)
Q Consensus 182 ~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 261 (797)
++|++++|+++++.+..|..++ +| ++|++++|++++..+..|..+++|++|++
T Consensus 88 ~~L~L~~n~l~~~~~~~~~~l~-~L--------------------------~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 88 TYLILTGNQLQSLPNGVFDKLT-NL--------------------------KELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCT-TC--------------------------CEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CEEECCCCccCccChhHhcCCc-CC--------------------------CEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 6666666666555444444433 23 33333333333333333444444444444
Q ss_pred cCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCccccccc
Q 040702 262 GGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVI 341 (797)
Q Consensus 262 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 341 (797)
++|+++++.+..|..+++|+.|++++|.++.+ .+..|+.+++|+.|++++|++++..
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-----------------------~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL-----------------------PEGVFDKLTQLKDLRLYQNQLKSVP 197 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC-----------------------CTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcCcc-----------------------CHHHhcCCccCCEEECCCCcCCccC
Confidence 44444444444444444444444444444433 3333444444444444444444444
Q ss_pred CccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCCChhhhcc
Q 040702 342 PTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKL 396 (797)
Q Consensus 342 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 396 (797)
+..|..+++|+.|++++|++.+. +++|+.|+++.|.++|.+|.+++.+
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 198 DGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred HHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 44444445555555555544422 2345555555555555555554443
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=1.5e-25 Score=243.55 Aligned_cols=227 Identities=18% Similarity=0.180 Sum_probs=91.4
Q ss_pred EcccCcccccCCccccCCCCCCEEEccCCcCcccCCC----ccccCCC-CccEEEccCccccccCCchhhCC-----CCC
Q 040702 59 AFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPS----SADVRLP-NLKELHLWGNNFIGTIPSFIFNA-----SKL 128 (797)
Q Consensus 59 ~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~L 128 (797)
++++|++++.+|..+...++|++|+|++|.|+ .++. ..+..++ +|++|+|++|++++..+..|..+ ++|
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~-~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLY-SISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGG-GSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCC-hHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 33444444433333333333444444444443 3322 2233333 44444444444443333333332 444
Q ss_pred CEEEccCCcCcccCCccccC----C-CCCCeeeccCccCcCCCCCccccccCCC-CCCCcEEEccCCCCCCCCChh----
Q 040702 129 SELGLQKNSFSGSIPNTFGN----L-RNLKWLGLNDNYLTSSTPELSSLSSLSN-CKYLEYFSFSNNPLGGILPRA---- 198 (797)
Q Consensus 129 ~~L~L~~N~l~~~~~~~f~~----l-~~L~~L~L~~N~l~~~~~~~~~~~~l~~-l~~L~~L~Ls~N~l~~~~~~~---- 198 (797)
++|+|++|+|++..+..+.. + ++|++|+|++|.|+..+.... ...+.. .++|++|+|++|+++...+..
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l-~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEF-KQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH-HHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHH-HHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 44444444444433332222 2 444444444444444332100 000112 134555555555544322222
Q ss_pred hhccccCCcEEEccCCcccccCChhhhhh-----hhhHhhhcccccccccCC----CchhhcC-CCCCcEEEccCCcCcc
Q 040702 199 IGNLSQSMEDFWMDNCNISGSIPEEINNL-----TNLILQLLSLEGNQLEGS----IPDDLCR-LAALFQLDLGGNKLSG 268 (797)
Q Consensus 199 ~~~l~~~L~~L~L~~n~i~~~~p~~~~~l-----~~L~L~~L~Ls~N~l~~~----~~~~~~~-l~~L~~L~Ls~N~l~~ 268 (797)
+...+.+|+.|+|++|.+++..+..+... ++| ++|+|++|.+... ++..+.. .++|++|+|++|.+++
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L--~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASV--TSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTC--CEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCC--CEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 22222245555555555544444333322 233 4444444444432 1222333 2356666666665554
Q ss_pred cCC----CCccCCccccccccCCCC
Q 040702 269 FVP----ACSGNLTNLRKLYLGSNL 289 (797)
Q Consensus 269 ~~~----~~~~~l~~L~~L~L~~N~ 289 (797)
..+ ..+..+++|+.|+|++|.
T Consensus 240 ~~~~~l~~~~~~l~~L~~L~L~~n~ 264 (362)
T 3goz_A 240 PSLENLKLLKDSLKHLQTVYLDYDI 264 (362)
T ss_dssp CCHHHHHHTTTTTTTCSEEEEEHHH
T ss_pred HHHHHHHHHHhcCCCccEEEeccCC
Confidence 332 122334445555555554
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=3.7e-24 Score=218.41 Aligned_cols=207 Identities=19% Similarity=0.250 Sum_probs=166.0
Q ss_pred cccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCcc-ccccCCchhhCCCCCCEEEccC-CcCccc
Q 040702 64 KVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNN-FIGTIPSFIFNASKLSELGLQK-NSFSGS 141 (797)
Q Consensus 64 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~ 141 (797)
+++. +|. +. ++|++|+|++|+|+ .+|...|..+++|++|+|++|+ ++.+.+..|.++++|++|+|++ |+|+.+
T Consensus 22 ~l~~-ip~-~~--~~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i 96 (239)
T 2xwt_C 22 DIQR-IPS-LP--PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYI 96 (239)
T ss_dssp SCSS-CCC-CC--TTCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEE
T ss_pred Cccc-cCC-CC--CcccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEc
Confidence 3554 455 33 38999999999998 7787778889999999999997 8877777889999999999998 999988
Q ss_pred CCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCc---EEEccCC-CCCCCCChhhhccccCCcEEEccCCccc
Q 040702 142 IPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLE---YFSFSNN-PLGGILPRAIGNLSQSMEDFWMDNCNIS 217 (797)
Q Consensus 142 ~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~---~L~Ls~N-~l~~~~~~~~~~l~~~L~~L~L~~n~i~ 217 (797)
.+.+|.++++|++|+|++|.++.++. |..+++|+ +|++++| +++++.+..|.+++ +|
T Consensus 97 ~~~~f~~l~~L~~L~l~~n~l~~lp~-------~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~-~L----------- 157 (239)
T 2xwt_C 97 DPDALKELPLLKFLGIFNTGLKMFPD-------LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLC-NE----------- 157 (239)
T ss_dssp CTTSEECCTTCCEEEEEEECCCSCCC-------CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTB-SS-----------
T ss_pred CHHHhCCCCCCCEEeCCCCCCccccc-------cccccccccccEEECCCCcchhhcCcccccchh-cc-----------
Confidence 88899999999999999999988664 44555555 8888888 78766666666655 44
Q ss_pred ccCChhhhhhhhhHhh-hcccccccccCCCchhhcCCCCCcEEEccCCc-CcccCCCCccCC-ccccccccCCCCCCCCC
Q 040702 218 GSIPEEINNLTNLILQ-LLSLEGNQLEGSIPDDLCRLAALFQLDLGGNK-LSGFVPACSGNL-TNLRKLYLGSNLLTSIP 294 (797)
Q Consensus 218 ~~~p~~~~~l~~L~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~~lp 294 (797)
+ +|++++|+++.+.+..|.. ++|+.|++++|+ ++.+.+..|.++ ++|+.|++++|.++.+|
T Consensus 158 ---------------~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~ 221 (239)
T 2xwt_C 158 ---------------TLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALP 221 (239)
T ss_dssp ---------------EEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCC
T ss_pred ---------------eeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCC
Confidence 4 5555556665444555655 899999999995 998888999999 99999999999999998
Q ss_pred CCCCCCCcccEEEccCCc
Q 040702 295 STLWNLKDILHLNLSSNF 312 (797)
Q Consensus 295 ~~~~~l~~L~~L~l~~N~ 312 (797)
.. .+++|+.|+++++.
T Consensus 222 ~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 222 SK--GLEHLKELIARNTW 237 (239)
T ss_dssp CT--TCTTCSEEECTTC-
T ss_pred hh--HhccCceeeccCcc
Confidence 76 67899999998763
No 337
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=5.7e-27 Score=272.83 Aligned_cols=402 Identities=15% Similarity=0.095 Sum_probs=278.1
Q ss_pred CCCCCCCCEEeCCCCCCCCcC---CCccccC----CCccccCCCCCCEEEcccCcccccCCcccc-CCCCCCEEEccCC-
Q 040702 17 LGNPSSLQTLYLSYNPPSGSI---PSFILCE----IPHEIDNLHNMEWMAFSFNKVVGVVPTTIF-NVSTLKSLYLHSN- 87 (797)
Q Consensus 17 ~~~l~~L~~LdLs~N~~~~~~---p~~~l~~----ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~-~l~~L~~L~Ls~N- 87 (797)
+..+++|++|+|++|.....+ |...... ++.-...+++|+.|+|++|.+++..+..+. ++++|++|+|++|
T Consensus 62 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~ 141 (594)
T 2p1m_B 62 IRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCE 141 (594)
T ss_dssp HHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCE
T ss_pred HhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcC
Confidence 456788999999998622111 1000000 011134678999999999999887777775 6899999999999
Q ss_pred cCcccCCCccccCCCCccEEEccCccccccCCchhh----CCCCCCEEEccCCcCcccCCccc----cCCCCCCeeeccC
Q 040702 88 SLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIF----NASKLSELGLQKNSFSGSIPNTF----GNLRNLKWLGLND 159 (797)
Q Consensus 88 ~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~l~~L~~L~L~~N~l~~~~~~~f----~~l~~L~~L~L~~ 159 (797)
.++..-.......+++|++|+|++|.+++..+..+. .+++|++|+|++|. ..+....+ .++++|++|+|++
T Consensus 142 ~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~ 220 (594)
T 2p1m_B 142 GFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNR 220 (594)
T ss_dssp EEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCT
T ss_pred CCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCC
Confidence 555221223334789999999999998765555444 56799999999997 32333333 4569999999999
Q ss_pred c-cCcCCCCCccccccCCCCCCCcEEEccCCC-------CCCCCChhhhccccCCcEE-EccCCcccccCChhhhhhhhh
Q 040702 160 N-YLTSSTPELSSLSSLSNCKYLEYFSFSNNP-------LGGILPRAIGNLSQSMEDF-WMDNCNISGSIPEEINNLTNL 230 (797)
Q Consensus 160 N-~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~-------l~~~~~~~~~~l~~~L~~L-~L~~n~i~~~~p~~~~~l~~L 230 (797)
| .++.++. .+..+++|+.|+++.+. +.+ .+..+.+++ +|+.| .+.+.. ...++..+..+++|
T Consensus 221 ~~~~~~l~~------~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~-~L~~Ls~~~~~~-~~~l~~~~~~~~~L 291 (594)
T 2p1m_B 221 AVPLEKLAT------LLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCK-ELRCLSGFWDAV-PAYLPAVYSVCSRL 291 (594)
T ss_dssp TSCHHHHHH------HHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCT-TCCEEECCBTCC-GGGGGGGHHHHTTC
T ss_pred CCcHHHHHH------HHhcCCcceEcccccccCccchhhHHH-HHHHHhcCC-CcccccCCcccc-hhhHHHHHHhhCCC
Confidence 8 4444222 25567889999976654 222 234667776 78888 344332 23456666678888
Q ss_pred HhhhcccccccccCCCc-hhhcCCCCCcEEEccCCcCccc-CCCCccCCccccccccCC---------CCCCCCC-CCC-
Q 040702 231 ILQLLSLEGNQLEGSIP-DDLCRLAALFQLDLGGNKLSGF-VPACSGNLTNLRKLYLGS---------NLLTSIP-STL- 297 (797)
Q Consensus 231 ~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~---------N~l~~lp-~~~- 297 (797)
++|++++|.+++... ..+..+++|++|++++| +... .+.....+++|++|++++ |.++... ..+
T Consensus 292 --~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~ 368 (594)
T 2p1m_B 292 --TTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVS 368 (594)
T ss_dssp --CEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHH
T ss_pred --CEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHH
Confidence 999999999764322 23567899999999998 4422 222233578999999943 4443211 112
Q ss_pred CCCCcccEEEccCCcCCCCCCcccc-ccccccEEecc--C----cccccc-----cCccccCCcccceecccCccccCCC
Q 040702 298 WNLKDILHLNLSSNFFTGPLPLKIG-NLNVLVQLDLS--M----NNFSCV-----IPTKIGGLKDLQYLFLEYNRLQGSI 365 (797)
Q Consensus 298 ~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~Ls--~----N~l~~~-----~~~~~~~l~~L~~L~Ls~N~l~~~~ 365 (797)
.++++|+.|.++.|.+++.....+. .+++|+.|+++ + |.++.. .+..+..+++|+.|+|++ .+++..
T Consensus 369 ~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~ 447 (594)
T 2p1m_B 369 MGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKV 447 (594)
T ss_dssp HHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHH
T ss_pred HhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHH
Confidence 2478999999999999865555554 58999999999 4 566632 122366789999999988 676655
Q ss_pred Chhhhc-cccCCeeeecCCcCCCCCChhh-hccCCCCeEEccCCcCcccCCC--CCCCCCCCcccccCCcc
Q 040702 366 PNSIGD-LISLKSLNLSNNNLSGTIPISL-EKLLDLKDINVSFNRLEGEIPR--EGPFRNLSAESFKGNEL 432 (797)
Q Consensus 366 p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~--~~~~~~l~~~~~~~n~~ 432 (797)
+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|++++..+. ...++.++.+++.+|+.
T Consensus 448 ~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 448 FEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 566665 8999999999999987666565 7799999999999999644322 23467788888888765
No 338
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=1.1e-23 Score=227.64 Aligned_cols=204 Identities=17% Similarity=0.133 Sum_probs=140.4
Q ss_pred CEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcc-cCCccccCCCCCCe-eec
Q 040702 80 KSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSG-SIPNTFGNLRNLKW-LGL 157 (797)
Q Consensus 80 ~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~f~~l~~L~~-L~L 157 (797)
++++.++|+|+ .+|..++ +++++|+|++|+|+.+.+.+|.++++|++|+|++|+|.+ +.+++|.++++|+. +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~---~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC---TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC---CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 57888899998 8898764 689999999999997777899999999999999999855 56678999999875 777
Q ss_pred cCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccC-CcccccCChhhhhhhhhHhhhcc
Q 040702 158 NDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDN-CNISGSIPEEINNLTNLILQLLS 236 (797)
Q Consensus 158 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~-n~i~~~~p~~~~~l~~L~L~~L~ 236 (797)
+.|+|+.++++ .|..+++|++|++++|++..+.+..+.... .+..|++.+ +++....+..|..+... +++|+
T Consensus 88 ~~N~l~~l~~~-----~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~-~l~~l~l~~~~~i~~l~~~~f~~~~~~-l~~L~ 160 (350)
T 4ay9_X 88 KANNLLYINPE-----AFQNLPNLQYLLISNTGIKHLPDVHKIHSL-QKVLLDIQDNINIHTIERNSFVGLSFE-SVILW 160 (350)
T ss_dssp EETTCCEECTT-----SBCCCTTCCEEEEEEECCSSCCCCTTCCBS-SCEEEEEESCTTCCEECTTSSTTSBSS-CEEEE
T ss_pred cCCcccccCch-----hhhhccccccccccccccccCCchhhcccc-hhhhhhhccccccccccccchhhcchh-hhhhc
Confidence 88999999886 489999999999999999988877776655 566676654 44554444444443321 14445
Q ss_pred cccccccCCCchhhcCCCCCcEEEcc-CCcCcccCCCCccCCccccccccCCCCCCCCCC
Q 040702 237 LEGNQLEGSIPDDLCRLAALFQLDLG-GNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPS 295 (797)
Q Consensus 237 Ls~N~l~~~~~~~~~~l~~L~~L~Ls-~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~ 295 (797)
|++|+|+.+.+..|. ..+|++|+++ +|.++.+.+..|.++++|++|+|++|+|+.+|.
T Consensus 161 L~~N~i~~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~ 219 (350)
T 4ay9_X 161 LNKNGIQEIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPS 219 (350)
T ss_dssp CCSSCCCEECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCS
T ss_pred cccccccCCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccCh
Confidence 555555433333332 2344444443 244444444444444555555555555444443
No 339
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=2.2e-25 Score=242.37 Aligned_cols=265 Identities=17% Similarity=0.179 Sum_probs=151.9
Q ss_pred EEEccCCcCcccCCCccccCCCCccEEEccCccccccCC----chhhCCC-CCCEEEccCCcCcccCCccccCC-----C
Q 040702 81 SLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIP----SFIFNAS-KLSELGLQKNSFSGSIPNTFGNL-----R 150 (797)
Q Consensus 81 ~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~f~~l-----~ 150 (797)
.++|++|.+++.+|.. ....++|++|+|++|.+++..+ ..|..++ +|++|+|++|+|++..+..|..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~-~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEF-TSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHH-HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHH-HhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 4567778877655543 3344558888888888776655 6667777 78888888888877767666665 7
Q ss_pred CCCeeeccCccCcCCCCCccccccCCCC-CCCcEEEccCCCCCCCCChhhhcc----ccCCcEEEccCCcccccCChhhh
Q 040702 151 NLKWLGLNDNYLTSSTPELSSLSSLSNC-KYLEYFSFSNNPLGGILPRAIGNL----SQSMEDFWMDNCNISGSIPEEIN 225 (797)
Q Consensus 151 ~L~~L~L~~N~l~~~~~~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~~~~~~~l----~~~L~~L~L~~n~i~~~~p~~~~ 225 (797)
+|++|+|++|.++...+... ...+..+ ++|++|+|++|+++...+..+... +.+|++|++++|.++...+..+.
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l-~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 159 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDEL-VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELI 159 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHH-HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred CccEEECcCCcCChHHHHHH-HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHH
Confidence 77777777777776544210 0012333 567777777777766655554432 23566666666655543332221
Q ss_pred hhhhhHhhhcccccccccCCCchhhcCCC-CCcEEEccCCcCcccCCCCcc----CC-ccccccccCCCCCCC-----CC
Q 040702 226 NLTNLILQLLSLEGNQLEGSIPDDLCRLA-ALFQLDLGGNKLSGFVPACSG----NL-TNLRKLYLGSNLLTS-----IP 294 (797)
Q Consensus 226 ~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~----~l-~~L~~L~L~~N~l~~-----lp 294 (797)
..+..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|.++. ++
T Consensus 160 ----------------------~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~ 217 (362)
T 3goz_A 160 ----------------------QILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELA 217 (362)
T ss_dssp ----------------------HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred ----------------------HHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHH
Confidence 1222333 566666666666544433222 22 356666666666544 34
Q ss_pred CCCCC-CCcccEEEccCCcCCCCCC----ccccccccccEEeccCcccccc-------cCccccCCcccceecccCcccc
Q 040702 295 STLWN-LKDILHLNLSSNFFTGPLP----LKIGNLNVLVQLDLSMNNFSCV-------IPTKIGGLKDLQYLFLEYNRLQ 362 (797)
Q Consensus 295 ~~~~~-l~~L~~L~l~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~-------~~~~~~~l~~L~~L~Ls~N~l~ 362 (797)
..+.. .++|++|++++|.+++..+ ..+..+++|+.|++++|.+..+ .+..+..+++|+.||+++|++.
T Consensus 218 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 218 YIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp HHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred HHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 43433 2366666666666664433 2234556666777776664322 2234556666777777777666
Q ss_pred CCCChhh
Q 040702 363 GSIPNSI 369 (797)
Q Consensus 363 ~~~p~~~ 369 (797)
...+..+
T Consensus 298 ~~~~~~~ 304 (362)
T 3goz_A 298 PSHSIPI 304 (362)
T ss_dssp GGGCHHH
T ss_pred CcchHHH
Confidence 5444333
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=2.4e-23 Score=220.73 Aligned_cols=195 Identities=22% Similarity=0.332 Sum_probs=122.7
Q ss_pred CCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCc
Q 040702 17 LGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSS 96 (797)
Q Consensus 17 ~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~ 96 (797)
+..+++|++|++++|.++ .+| .+..+++|++|++++|+++++.+ +.++++|++|+|++|+++ .++
T Consensus 37 ~~~l~~L~~L~l~~~~i~---------~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~-~~~-- 101 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT---------TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-- 101 (308)
T ss_dssp HHHHHTCCEEECTTSCCC---------CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG--
T ss_pred HHHcCCcCEEEeeCCCcc---------Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCC-Cch--
Confidence 345667777777777632 333 46667777777777777766544 667777777777777776 444
Q ss_pred cccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCC
Q 040702 97 ADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLS 176 (797)
Q Consensus 97 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~ 176 (797)
.+..+++|++|+|++|++++. + .+..+++|++|+|++|+|+++.+ |.++++|++|+|++|.++.+++ +.
T Consensus 102 ~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-------l~ 170 (308)
T 1h6u_A 102 AIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-------LA 170 (308)
T ss_dssp GGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-------GT
T ss_pred hhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh-------hc
Confidence 345667777777777776643 2 26667777777777777765544 6667777777777776665443 45
Q ss_pred CCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCC
Q 040702 177 NCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAAL 256 (797)
Q Consensus 177 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L 256 (797)
.+++|+.|++++|+++++.+ +..++ +| ++|++++|++++.. .+..+++|
T Consensus 171 ~l~~L~~L~l~~n~l~~~~~--l~~l~-~L--------------------------~~L~L~~N~l~~~~--~l~~l~~L 219 (308)
T 1h6u_A 171 NLSKLTTLKADDNKISDISP--LASLP-NL--------------------------IEVHLKNNQISDVS--PLANTSNL 219 (308)
T ss_dssp TCTTCCEEECCSSCCCCCGG--GGGCT-TC--------------------------CEEECTTSCCCBCG--GGTTCTTC
T ss_pred CCCCCCEEECCCCccCcChh--hcCCC-CC--------------------------CEEEccCCccCccc--cccCCCCC
Confidence 56666666666666665433 44443 34 55555555555433 25666777
Q ss_pred cEEEccCCcCcc
Q 040702 257 FQLDLGGNKLSG 268 (797)
Q Consensus 257 ~~L~Ls~N~l~~ 268 (797)
+.|+|++|++++
T Consensus 220 ~~L~l~~N~i~~ 231 (308)
T 1h6u_A 220 FIVTLTNQTITN 231 (308)
T ss_dssp CEEEEEEEEEEC
T ss_pred CEEEccCCeeec
Confidence 777777777764
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.3e-23 Score=223.33 Aligned_cols=206 Identities=20% Similarity=0.170 Sum_probs=118.4
Q ss_pred CCCCCEEEccCCcCcccCCccc--cCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhcc
Q 040702 125 ASKLSELGLQKNSFSGSIPNTF--GNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNL 202 (797)
Q Consensus 125 l~~L~~L~L~~N~l~~~~~~~f--~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 202 (797)
+++|++|+|++|++++..|..| .++++|++|+|++|.++...+.+... .+..+++|++|+|++|++.+..+..|..+
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAEL-QQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHH-HTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHH-HhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 3456666666666665555555 56666666666666665533321111 13355566666666666666655666555
Q ss_pred ccCCcEEEccCCccccc--C--ChhhhhhhhhHhhhcccccccccCCCch---hhcCCCCCcEEEccCCcCcccCCCCcc
Q 040702 203 SQSMEDFWMDNCNISGS--I--PEEINNLTNLILQLLSLEGNQLEGSIPD---DLCRLAALFQLDLGGNKLSGFVPACSG 275 (797)
Q Consensus 203 ~~~L~~L~L~~n~i~~~--~--p~~~~~l~~L~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (797)
+ +|+.|++++|++.+. . +..+..+++| ++|+|++|+++...+. .+..+++|++|||++|++++..|..+.
T Consensus 169 ~-~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L--~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~ 245 (310)
T 4glp_A 169 P-ALTSLDLSDNPGLGERGLMAALCPHKFPAI--QNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAP 245 (310)
T ss_dssp T-TCCEEECCSCTTCHHHHHHTTSCTTSSCCC--CSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCS
T ss_pred C-CCCEEECCCCCCccchhhhHHHhhhcCCCC--CEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHH
Confidence 5 566666666655431 1 1122344555 6677777776522111 245667777777777777776666555
Q ss_pred CC---ccccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccc
Q 040702 276 NL---TNLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFS 338 (797)
Q Consensus 276 ~l---~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 338 (797)
.+ ++|++|+|++|+|+.+|..+. ++|+.|++++|++++. |. +..+++|+.|++++|+++
T Consensus 246 ~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 246 RCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp SCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred hccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 55 577777777777777766553 5666666666666643 22 445555555555555554
No 342
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=9.5e-24 Score=224.27 Aligned_cols=229 Identities=19% Similarity=0.153 Sum_probs=149.2
Q ss_pred CCCEEEcccCcccccCCc---cccCCCCCCEEEccCCcCcccCCCccc-cCCCCccEEEccCccccccCC----chhhCC
Q 040702 54 NMEWMAFSFNKVVGVVPT---TIFNVSTLKSLYLHSNSLSGRLPSSAD-VRLPNLKELHLWGNNFIGTIP----SFIFNA 125 (797)
Q Consensus 54 ~L~~L~ls~N~i~~~~p~---~~~~l~~L~~L~Ls~N~l~~~l~~~~~-~~l~~L~~L~L~~N~l~~~~~----~~~~~l 125 (797)
.++.|.++++.+....-. .+..+++|++|+|++|.+++..|...+ ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 356667766665431100 122345677777777777755665544 567777777777777775444 344567
Q ss_pred CCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcC---CCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhcc
Q 040702 126 SKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTS---STPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNL 202 (797)
Q Consensus 126 ~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~---~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 202 (797)
++|++|+|++|+|.++.+..|.++++|++|+|++|++.. ++... .+..+++|++|+|++|+++... ..
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~----~~~~l~~L~~L~Ls~N~l~~l~-~~---- 215 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAAL----CPHKFPAIQNLALRNTGMETPT-GV---- 215 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTS----CTTSSCCCCSCBCCSSCCCCHH-HH----
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHH----hhhcCCCCCEEECCCCCCCchH-HH----
Confidence 777777777777777777777777777777777777643 22111 1345666777777777765321 11
Q ss_pred ccCCcEEEccCCcccccCCh-hhhhhhhhHhhhcccccccccCCCchhhcCC---CCCcEEEccCCcCcccCCCCccCCc
Q 040702 203 SQSMEDFWMDNCNISGSIPE-EINNLTNLILQLLSLEGNQLEGSIPDDLCRL---AALFQLDLGGNKLSGFVPACSGNLT 278 (797)
Q Consensus 203 ~~~L~~L~L~~n~i~~~~p~-~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~ 278 (797)
+. .+.++++| ++|+|++|++++..|..+..+ ++|++|+|++|+|+.+ |..+. +
T Consensus 216 ------------------~~~l~~~l~~L--~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~l-p~~~~--~ 272 (310)
T 4glp_A 216 ------------------CAALAAAGVQP--HSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQV-PKGLP--A 272 (310)
T ss_dssp ------------------HHHHHHHTCCC--SSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSC-CSCCC--S
T ss_pred ------------------HHHHHhcCCCC--CEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCch-hhhhc--C
Confidence 01 12344444 677777777776666666555 5888888888888844 55443 7
Q ss_pred cccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCC
Q 040702 279 NLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTG 315 (797)
Q Consensus 279 ~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~ 315 (797)
+|+.|+|++|+|+.+|. +..+++|+.|++++|+++.
T Consensus 273 ~L~~L~Ls~N~l~~~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 273 KLRVLDLSSNRLNRAPQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCSCEECCSCCCCSCCC-TTSCCCCSCEECSSTTTSC
T ss_pred CCCEEECCCCcCCCCch-hhhCCCccEEECcCCCCCC
Confidence 88888999998888765 6678888899999998873
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=3.9e-24 Score=226.77 Aligned_cols=209 Identities=24% Similarity=0.362 Sum_probs=123.9
Q ss_pred EEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCC
Q 040702 57 WMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKN 136 (797)
Q Consensus 57 ~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 136 (797)
.+.+..+++.+.. .+..+++|++|++++|.++ .+|. +..+++|++|+|++|++++..+ +..+++|++|+|++|
T Consensus 23 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~l~~--~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n 95 (308)
T 1h6u_A 23 KIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIEG--VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN 95 (308)
T ss_dssp HHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred HHHhCCCCcCcee--cHHHcCCcCEEEeeCCCcc-Cchh--hhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCC
Confidence 3344555555432 2345667777777777776 5552 3466777777777777764433 667777777777777
Q ss_pred cCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcc
Q 040702 137 SFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNI 216 (797)
Q Consensus 137 ~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i 216 (797)
+|+++ ..|.++++|++|+|++|.++.+++ +..+++|+.|++++|+++++.+ +..++ +|+.|++++|.+
T Consensus 96 ~l~~~--~~~~~l~~L~~L~l~~n~l~~~~~-------l~~l~~L~~L~l~~n~l~~~~~--l~~l~-~L~~L~l~~n~l 163 (308)
T 1h6u_A 96 PLKNV--SAIAGLQSIKTLDLTSTQITDVTP-------LAGLSNLQVLYLDLNQITNISP--LAGLT-NLQYLSIGNAQV 163 (308)
T ss_dssp CCSCC--GGGTTCTTCCEEECTTSCCCCCGG-------GTTCTTCCEEECCSSCCCCCGG--GGGCT-TCCEEECCSSCC
T ss_pred cCCCc--hhhcCCCCCCEEECCCCCCCCchh-------hcCCCCCCEEECCCCccCcCcc--ccCCC-CccEEEccCCcC
Confidence 77654 256777777777777777766532 5566667777777777765433 44444 444444444444
Q ss_pred cccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCC
Q 040702 217 SGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPST 296 (797)
Q Consensus 217 ~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~ 296 (797)
+ +..+ +..+++|+.|++++|+++++.+ +..+++|+.|+|++|.++.+++
T Consensus 164 ~--------------------------~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~- 212 (308)
T 1h6u_A 164 S--------------------------DLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP- 212 (308)
T ss_dssp C--------------------------CCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG-
T ss_pred C--------------------------CChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc-
Confidence 3 2222 4455556666666666654433 5556666666666666655552
Q ss_pred CCCCCcccEEEccCCcCCC
Q 040702 297 LWNLKDILHLNLSSNFFTG 315 (797)
Q Consensus 297 ~~~l~~L~~L~l~~N~l~~ 315 (797)
+..+++|+.|++++|.+++
T Consensus 213 l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 213 LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GTTCTTCCEEEEEEEEEEC
T ss_pred ccCCCCCCEEEccCCeeec
Confidence 5556666666666666653
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=8.2e-25 Score=240.19 Aligned_cols=276 Identities=19% Similarity=0.222 Sum_probs=180.4
Q ss_pred cCCchhhCCCCCCEEEccCCcCcccCC----ccccCCCCCCeeeccCccCcCCCCC----cccc-ccCCCCCCCcEEEcc
Q 040702 117 TIPSFIFNASKLSELGLQKNSFSGSIP----NTFGNLRNLKWLGLNDNYLTSSTPE----LSSL-SSLSNCKYLEYFSFS 187 (797)
Q Consensus 117 ~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~f~~l~~L~~L~L~~N~l~~~~~~----~~~~-~~l~~l~~L~~L~Ls 187 (797)
.++..+..+++|++|+|++|+|+...+ ..|..+++|++|+|++|.+..+... +..+ ..|..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 445566666677777777777665533 2355677777777777655433211 1000 124567788888888
Q ss_pred CCCCCC----CCChhhhccccCCcEEEccCCcccccCChhhhh-hhhhHhhhcccccccccCCCchhhcCCCCCcEEEcc
Q 040702 188 NNPLGG----ILPRAIGNLSQSMEDFWMDNCNISGSIPEEINN-LTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLG 262 (797)
Q Consensus 188 ~N~l~~----~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~-l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 262 (797)
+|+++. .+|..+..++ +|+.|+|++|.++...+..+.. +..+ ..|.+.+ ..++|++|+|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~-~L~~L~L~~n~l~~~~~~~l~~~l~~l-------~~~~~~~-------~~~~L~~L~L~ 167 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHT-PLEHLYLHNNGLGPQAGAKIARALQEL-------AVNKKAK-------NAPPLRSIICG 167 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCT-TCCEEECCSSCCHHHHHHHHHHHHHHH-------HHHHHHH-------TCCCCCEEECC
T ss_pred CCcCCHHHHHHHHHHHHhCC-CCCEEECcCCCCCHHHHHHHHHHHHHH-------hhhhhcc-------cCCCCcEEECC
Confidence 888876 3566677776 7888888888886544444433 1111 1122221 11677777777
Q ss_pred CCcCc-ccCC---CCccCCccccccccCCCCCC------CCCCCCCCCCcccEEEccCCcCC----CCCCcccccccccc
Q 040702 263 GNKLS-GFVP---ACSGNLTNLRKLYLGSNLLT------SIPSTLWNLKDILHLNLSSNFFT----GPLPLKIGNLNVLV 328 (797)
Q Consensus 263 ~N~l~-~~~~---~~~~~l~~L~~L~L~~N~l~------~lp~~~~~l~~L~~L~l~~N~l~----~~~~~~~~~l~~L~ 328 (797)
+|+++ ...+ ..+..+++|++|+|++|.++ -+|..+..+++|+.|+|++|.++ ..+|..+..+++|+
T Consensus 168 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~ 247 (386)
T 2ca6_A 168 RNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR 247 (386)
T ss_dssp SSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC
T ss_pred CCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcC
Confidence 77776 2223 34556677778888888776 23446777788888888888885 45666778888888
Q ss_pred EEeccCcccccc----cCccc--cCCcccceecccCccccC----CCChhh-hccccCCeeeecCCcCCCCCC--hhh-h
Q 040702 329 QLDLSMNNFSCV----IPTKI--GGLKDLQYLFLEYNRLQG----SIPNSI-GDLISLKSLNLSNNNLSGTIP--ISL-E 394 (797)
Q Consensus 329 ~L~Ls~N~l~~~----~~~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~p--~~~-~ 394 (797)
.|+|++|.+++. ++..+ +.+++|+.|+|++|++++ .+|..+ .++++|++|+|++|.+++..+ ..+ .
T Consensus 248 ~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~~~l~~ 327 (386)
T 2ca6_A 248 ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIRE 327 (386)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHHHHHHH
T ss_pred EEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHHHHHHH
Confidence 888988888765 45555 348889999999999986 477777 668999999999999987764 333 2
Q ss_pred ccCCCCeEEccCC
Q 040702 395 KLLDLKDINVSFN 407 (797)
Q Consensus 395 ~l~~L~~L~l~~N 407 (797)
.+++++.+++..+
T Consensus 328 ~l~~~~~~~l~~~ 340 (386)
T 2ca6_A 328 VFSTRGRGELDEL 340 (386)
T ss_dssp HHHHHTCCEECCC
T ss_pred HhhhcCcchhhhc
Confidence 3455555555543
No 345
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=5.5e-25 Score=241.58 Aligned_cols=251 Identities=16% Similarity=0.159 Sum_probs=162.7
Q ss_pred ccCCCccccCCCCCCEEEcccCcccccCCc----cccCCCCCCEEEccCCc---CcccCCCcc------ccCCCCccEEE
Q 040702 42 LCEIPHEIDNLHNMEWMAFSFNKVVGVVPT----TIFNVSTLKSLYLHSNS---LSGRLPSSA------DVRLPNLKELH 108 (797)
Q Consensus 42 l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~----~~~~l~~L~~L~Ls~N~---l~~~l~~~~------~~~l~~L~~L~ 108 (797)
...++..+..+++|++|+|++|++....+. .|..+++|++|+|++|. +++.+|..+ +..+++|++|+
T Consensus 21 ~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~ 100 (386)
T 2ca6_A 21 EKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVR 100 (386)
T ss_dssp HHTTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEE
T ss_pred HHHHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEE
Confidence 566777888888899999999998876443 47788899999998864 444455443 35678888888
Q ss_pred ccCccccc----cCCchhhCCCCCCEEEccCCcCcccCCccccC----C---------CCCCeeeccCccCcCCC-CCcc
Q 040702 109 LWGNNFIG----TIPSFIFNASKLSELGLQKNSFSGSIPNTFGN----L---------RNLKWLGLNDNYLTSST-PELS 170 (797)
Q Consensus 109 L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~----l---------~~L~~L~L~~N~l~~~~-~~~~ 170 (797)
|++|.+++ .+|..+..+++|++|+|++|.|+...+..|.. + ++|++|+|++|+++... +.+.
T Consensus 101 Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 180 (386)
T 2ca6_A 101 LSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWA 180 (386)
T ss_dssp CCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHH
Confidence 88888876 46667778888888888888887544444433 3 67777777777775221 1000
Q ss_pred ccccCCCCCCCcEEEccCCCCCC-----CCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCC
Q 040702 171 SLSSLSNCKYLEYFSFSNNPLGG-----ILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGS 245 (797)
Q Consensus 171 ~~~~l~~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~ 245 (797)
..+..+++|++|++++|+++. ..+..+..++ +|+.|+|++|.++... ...
T Consensus 181 --~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~-~L~~L~Ls~n~l~~~g----------------------~~~ 235 (386)
T 2ca6_A 181 --KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQ-ELKVLDLQDNTFTHLG----------------------SSA 235 (386)
T ss_dssp --HHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCT-TCCEEECCSSCCHHHH----------------------HHH
T ss_pred --HHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCC-CccEEECcCCCCCcHH----------------------HHH
Confidence 124455566677777766652 1222344443 4444444444443100 023
Q ss_pred CchhhcCCCCCcEEEccCCcCccc----CCCCc--cCCccccccccCCCCCCC-----CCCCC-CCCCcccEEEccCCcC
Q 040702 246 IPDDLCRLAALFQLDLGGNKLSGF----VPACS--GNLTNLRKLYLGSNLLTS-----IPSTL-WNLKDILHLNLSSNFF 313 (797)
Q Consensus 246 ~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~--~~l~~L~~L~L~~N~l~~-----lp~~~-~~l~~L~~L~l~~N~l 313 (797)
+|..+..+++|+.|+|++|.+++. ++..+ +.+++|+.|+|++|.++. +|..+ .++++|+.|++++|.+
T Consensus 236 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 236 LAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315 (386)
T ss_dssp HHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred HHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcC
Confidence 455666677777777777777654 33444 337778888888888866 77666 4478888888888888
Q ss_pred CCCC
Q 040702 314 TGPL 317 (797)
Q Consensus 314 ~~~~ 317 (797)
++..
T Consensus 316 ~~~~ 319 (386)
T 2ca6_A 316 SEED 319 (386)
T ss_dssp CTTS
T ss_pred Ccch
Confidence 8655
No 346
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.9e-22 Score=207.18 Aligned_cols=127 Identities=20% Similarity=0.270 Sum_probs=68.0
Q ss_pred CCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeecc
Q 040702 79 LKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLN 158 (797)
Q Consensus 79 L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~ 158 (797)
.++++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CeEEecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 445555555555 5554432 455555555555555555555555555666666555555555555555566666666
Q ss_pred CccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCc
Q 040702 159 DNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCN 215 (797)
Q Consensus 159 ~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~ 215 (797)
+|.++.+++. .|..+++|++|+|++|+|+++.+..|..++ +|+.|+|++|.
T Consensus 92 ~n~l~~~~~~-----~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~ 142 (251)
T 3m19_A 92 NNQLASLPLG-----VFDHLTQLDKLYLGGNQLKSLPSGVFDRLT-KLKELRLNTNQ 142 (251)
T ss_dssp TSCCCCCCTT-----TTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSC
T ss_pred CCcccccChh-----HhcccCCCCEEEcCCCcCCCcChhHhccCC-cccEEECcCCc
Confidence 6655555543 245555555555555555555444444443 33333333333
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=5.6e-24 Score=228.87 Aligned_cols=252 Identities=16% Similarity=0.174 Sum_probs=112.6
Q ss_pred ccEEEccCccccccCCchhhCC--CCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCC-CCCccccccCCCCCC
Q 040702 104 LKELHLWGNNFIGTIPSFIFNA--SKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSS-TPELSSLSSLSNCKY 180 (797)
Q Consensus 104 L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~-~~~~~~~~~l~~l~~ 180 (797)
++.|++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.++.. .+. .+..+++
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~-----~~~~~~~ 119 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHG-----ILSQCSK 119 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHH-----HHTTBCC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHH-----HHhhCCC
Confidence 556666666554 3344444 5566666666655554443 23455555555555554321 111 1334444
Q ss_pred CcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCC-CchhhcCCCCCcEE
Q 040702 181 LEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGS-IPDDLCRLAALFQL 259 (797)
Q Consensus 181 L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L 259 (797)
|++|+|++|++.+..+..++.++ +|+.|++++|. .+++. .+..+..+++|++|
T Consensus 120 L~~L~L~~~~l~~~~~~~l~~~~-~L~~L~L~~~~-------------------------~l~~~~l~~~~~~~~~L~~L 173 (336)
T 2ast_B 120 LQNLSLEGLRLSDPIVNTLAKNS-NLVRLNLSGCS-------------------------GFSEFALQTLLSSCSRLDEL 173 (336)
T ss_dssp CSEEECTTCBCCHHHHHHHTTCT-TCSEEECTTCB-------------------------SCCHHHHHHHHHHCTTCCEE
T ss_pred CCEEeCcCcccCHHHHHHHhcCC-CCCEEECCCCC-------------------------CCCHHHHHHHHhcCCCCCEE
Confidence 55555555544433333343333 34333333331 22211 22233344445555
Q ss_pred EccCC-cCccc-CCCCccCCc-cccccccCCCCCCCCCCCCCCCCcccEEEccCCcCC-CCCCccccccccccEEeccCc
Q 040702 260 DLGGN-KLSGF-VPACSGNLT-NLRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFT-GPLPLKIGNLNVLVQLDLSMN 335 (797)
Q Consensus 260 ~Ls~N-~l~~~-~~~~~~~l~-~L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~N 335 (797)
++++| .+++. .+..+..++ +|++|++++|.+ .++ +..+..+..+++|+.|++++|
T Consensus 174 ~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~---------------------~~~~~~l~~~~~~~~~L~~L~l~~~ 232 (336)
T 2ast_B 174 NLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK---------------------NLQKSDLSTLVRRCPNLVHLDLSDS 232 (336)
T ss_dssp ECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG---------------------GSCHHHHHHHHHHCTTCSEEECTTC
T ss_pred cCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcc---------------------cCCHHHHHHHHhhCCCCCEEeCCCC
Confidence 55555 44432 122233333 444444444321 222 122333444455555555555
Q ss_pred c-cccccCccccCCcccceecccCcc-ccCCCChhhhccccCCeeeecCCcCCCCCChhhhcc-CCCCeEEccCCcCccc
Q 040702 336 N-FSCVIPTKIGGLKDLQYLFLEYNR-LQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKL-LDLKDINVSFNRLEGE 412 (797)
Q Consensus 336 ~-l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~ 412 (797)
. +++..+..+..+++|++|++++|. +.......++.+++|+.|++++| ++ ...+..+ .+++.|++++|++++.
T Consensus 233 ~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~ 308 (336)
T 2ast_B 233 VMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTI 308 (336)
T ss_dssp TTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCT
T ss_pred CcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccc
Confidence 5 444444455555555555555553 21111123555566666666666 22 1223333 2255555666666665
Q ss_pred CCC
Q 040702 413 IPR 415 (797)
Q Consensus 413 ~p~ 415 (797)
.|.
T Consensus 309 ~~~ 311 (336)
T 2ast_B 309 ARP 311 (336)
T ss_dssp TCS
T ss_pred cCC
Confidence 553
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=9.6e-24 Score=227.04 Aligned_cols=253 Identities=17% Similarity=0.198 Sum_probs=123.0
Q ss_pred CCEEEcccCcccccCCccccCC--CCCCEEEccCCcCcccCCCccccCCCCccEEEccCcccccc-CCchhhCCCCCCEE
Q 040702 55 MEWMAFSFNKVVGVVPTTIFNV--STLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGT-IPSFIFNASKLSEL 131 (797)
Q Consensus 55 L~~L~ls~N~i~~~~p~~~~~l--~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L 131 (797)
++.+++++|++. |..+..+ ++++.|++++|.+.+..+ ..+ .+++|++|+|++|.+++. ++..+..+++|++|
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~-~~~-~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLA-EHF-SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCC-SCC-CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccch-hhc-cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 445555555443 3334444 455555555555543222 222 455555555555555433 44445555555555
Q ss_pred EccCCcCcccCCccccCCCCCCeeeccCc-cCcC--CCCCccccccCCCCCCCcEEEccCC-CCCCC-CChhhhccccCC
Q 040702 132 GLQKNSFSGSIPNTFGNLRNLKWLGLNDN-YLTS--STPELSSLSSLSNCKYLEYFSFSNN-PLGGI-LPRAIGNLSQSM 206 (797)
Q Consensus 132 ~L~~N~l~~~~~~~f~~l~~L~~L~L~~N-~l~~--~~~~~~~~~~l~~l~~L~~L~Ls~N-~l~~~-~~~~~~~l~~~L 206 (797)
+|++|++++..+..|..+++|++|+|++| .++. ++. .+.++++|++|++++| .+++. .+..+..++.+|
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~------~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L 197 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQT------LLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETI 197 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHH------HHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHH------HHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCC
Confidence 55555555444555555555555555555 3432 111 1333444555555555 44432 233333333234
Q ss_pred cEEEccCCcccccCChhhhhhhhhHhhhccccccccc-CCCchhhcCCCCCcEEEccCCc-CcccCCCCccCCccccccc
Q 040702 207 EDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLE-GSIPDDLCRLAALFQLDLGGNK-LSGFVPACSGNLTNLRKLY 284 (797)
Q Consensus 207 ~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~ 284 (797)
+.|++++|.+ .++ +..+..+..+++|++|++++|. +++..+..+..+++|+.|+
T Consensus 198 ~~L~l~~~~~------------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~ 253 (336)
T 2ast_B 198 TQLNLSGYRK------------------------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLS 253 (336)
T ss_dssp CEEECCSCGG------------------------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEE
T ss_pred CEEEeCCCcc------------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEee
Confidence 4444444421 121 1223344445556666666665 4444444555556666666
Q ss_pred cCCCCCCCCCC---CCCCCCcccEEEccCCcCCCCCCcccccc-ccccEEeccCcccccccCccccC
Q 040702 285 LGSNLLTSIPS---TLWNLKDILHLNLSSNFFTGPLPLKIGNL-NVLVQLDLSMNNFSCVIPTKIGG 347 (797)
Q Consensus 285 L~~N~l~~lp~---~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~ 347 (797)
+++|. ...+. .+..+++|+.|++++| +. ...+..+ ..++.|++++|.+++..|..++.
T Consensus 254 l~~~~-~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 254 LSRCY-DIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp CTTCT-TCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCC-CCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 66664 11111 3445666777777666 32 1223333 23666667777777776666554
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=8.7e-22 Score=196.17 Aligned_cols=152 Identities=23% Similarity=0.290 Sum_probs=108.1
Q ss_pred CEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCC
Q 040702 24 QTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPN 103 (797)
Q Consensus 24 ~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 103 (797)
+.++.+++. ++++|..+ .++|++|++++|+++++.+..|.++++|++|+|++|+++ .+|...|..+++
T Consensus 10 ~~v~c~~~~---------l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~ 77 (208)
T 2o6s_A 10 TTVECYSQG---------RTSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTS 77 (208)
T ss_dssp TEEECCSSC---------CSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTT
T ss_pred CEEEecCCC---------ccCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-ccChhhcCCCCC
Confidence 567777776 34445444 246777888888777776667777777888888877777 667666667777
Q ss_pred ccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcE
Q 040702 104 LKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEY 183 (797)
Q Consensus 104 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~ 183 (797)
|++|+|++|++++..+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|.++.+++. .|..+++|+.
T Consensus 78 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-----~~~~l~~L~~ 152 (208)
T 2o6s_A 78 LTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG-----VFDRLTSLQY 152 (208)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT-----TTTTCTTCCE
T ss_pred cCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH-----HhccCCCccE
Confidence 77777777777766666677777777777777777777777777777777777777777766654 2566667777
Q ss_pred EEccCCCCC
Q 040702 184 FSFSNNPLG 192 (797)
Q Consensus 184 L~Ls~N~l~ 192 (797)
|++++|++.
T Consensus 153 L~l~~N~~~ 161 (208)
T 2o6s_A 153 IWLHDNPWD 161 (208)
T ss_dssp EECCSCCBC
T ss_pred EEecCCCee
Confidence 777777655
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=9.9e-21 Score=188.49 Aligned_cols=182 Identities=24% Similarity=0.268 Sum_probs=157.4
Q ss_pred CCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEcc
Q 040702 55 MEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQ 134 (797)
Q Consensus 55 L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 134 (797)
-+.++++++.++.+ |..+ .++|++|+|++|+++ .++...|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 9 ~~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 9 GTTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp TTEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCccCC-CCCC--CCCCcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECC
Confidence 35788999999864 4443 468999999999998 7888888899999999999999998777788999999999999
Q ss_pred CCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCC
Q 040702 135 KNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNC 214 (797)
Q Consensus 135 ~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n 214 (797)
+|+|+++.+..|.++++|++|+|++|.|+.+++. .|..+++|+.|++++|+++++.+..|..++ +|+.|++++|
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~l~~N 158 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDG-----VFDKLTQLKDLRLYQNQLKSVPDGVFDRLT-SLQYIWLHDN 158 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTTCCEEECCSSCCSCCCTTTTTTCT-TCCEEECCSC
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHh-----HhccCCcCCEEECCCCccceeCHHHhccCC-CccEEEecCC
Confidence 9999998888899999999999999999998876 378899999999999999988888888887 8999999999
Q ss_pred cccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCC
Q 040702 215 NISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAA 255 (797)
Q Consensus 215 ~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~ 255 (797)
.+.+..| +| ++|+++.|++++.+|..++.++.
T Consensus 159 ~~~~~~~-------~l--~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 159 PWDCTCP-------GI--RYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CBCCCTT-------TT--HHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CeecCCC-------CH--HHHHHHHHhCCceeeccCccccC
Confidence 8876544 44 88899999999888887776653
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=1e-20 Score=215.09 Aligned_cols=188 Identities=23% Similarity=0.263 Sum_probs=144.9
Q ss_pred CCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCC
Q 040702 22 SLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRL 101 (797)
Q Consensus 22 ~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l 101 (797)
+|++|||++|.+++ +|..+. ++|++|+|++|+|+. +| ..+++|++|+|++|+|+ .+|. + ..
T Consensus 60 ~L~~L~Ls~n~L~~---------lp~~l~--~~L~~L~Ls~N~l~~-ip---~~l~~L~~L~Ls~N~l~-~ip~-l-~~- 120 (571)
T 3cvr_A 60 QFSELQLNRLNLSS---------LPDNLP--PQITVLEITQNALIS-LP---ELPASLEYLDACDNRLS-TLPE-L-PA- 120 (571)
T ss_dssp TCSEEECCSSCCSC---------CCSCCC--TTCSEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC-C-CT-
T ss_pred CccEEEeCCCCCCc---------cCHhHc--CCCCEEECcCCCCcc-cc---cccCCCCEEEccCCCCC-Ccch-h-hc-
Confidence 88899999988654 344332 678899999999885 55 44788999999999998 5777 3 23
Q ss_pred CCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCC
Q 040702 102 PNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYL 181 (797)
Q Consensus 102 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L 181 (797)
+|++|+|++|+|++ +|. .+++|++|+|++|+|+++.+ .+++|++|+|++|+|+.++. + . ++|
T Consensus 121 -~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~~lp~-l------~--~~L 182 (571)
T 3cvr_A 121 -SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLTFLPE-L------P--ESL 182 (571)
T ss_dssp -TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCCC-C------C--TTC
T ss_pred -CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC----cCCCcCEEECCCCCCCCcch-h------h--CCC
Confidence 89999999999886 555 57889999999999987543 57889999999999888765 3 2 778
Q ss_pred cEEEccCCCCCCCCChhhhccccCC-------cEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCC
Q 040702 182 EYFSFSNNPLGGILPRAIGNLSQSM-------EDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLA 254 (797)
Q Consensus 182 ~~L~Ls~N~l~~~~~~~~~~l~~~L-------~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~ 254 (797)
+.|+|++|+|+.++ . |.. +| +.|+|++|.|+ .+|..+..+++| ++|+|++|.+++..|..+..+.
T Consensus 183 ~~L~Ls~N~L~~lp-~-~~~---~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L--~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 183 EALDVSTNLLESLP-A-VPV---RNHHSEETEIFFRCRENRIT-HIPENILSLDPT--CTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CEEECCSSCCSSCC-C-CC-----------CCEEEECCSSCCC-CCCGGGGGSCTT--EEEECCSSSCCHHHHHHHHHHH
T ss_pred CEEECcCCCCCchh-h-HHH---hhhcccccceEEecCCCcce-ecCHHHhcCCCC--CEEEeeCCcCCCcCHHHHHHhh
Confidence 89999999988544 3 433 56 88999999988 577777778888 8899999999888888887654
No 352
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.85 E-value=5.2e-21 Score=207.55 Aligned_cols=180 Identities=22% Similarity=0.231 Sum_probs=151.1
Q ss_pred CEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCcccc-CCCCCCEEEccCCcCcccCCCccccCCC
Q 040702 24 QTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIF-NVSTLKSLYLHSNSLSGRLPSSADVRLP 102 (797)
Q Consensus 24 ~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~-~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 102 (797)
+++|+++|+ ++.+|..+. ..++.|+|++|+|+++.+..|. ++++|+.|+|++|+|+ .++...|..++
T Consensus 21 ~~l~c~~~~---------l~~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~ 88 (361)
T 2xot_A 21 NILSCSKQQ---------LPNVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVP 88 (361)
T ss_dssp TEEECCSSC---------CSSCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC-EECTTTTTTCT
T ss_pred CEEEeCCCC---------cCccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCC-ccChhhccCCC
Confidence 689999998 445666554 3689999999999998888888 9999999999999998 77877888999
Q ss_pred CccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCc
Q 040702 103 NLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLE 182 (797)
Q Consensus 103 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~ 182 (797)
+|++|+|++|+|+...+..|.++++|++|+|++|+|+.+.+.+|.++++|++|+|++|+|+.++... +..+..+++|+
T Consensus 89 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~--~~~~~~l~~L~ 166 (361)
T 2xot_A 89 NLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVEL--IKDGNKLPKLM 166 (361)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGG--TC----CTTCC
T ss_pred CCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHH--hcCcccCCcCC
Confidence 9999999999999888888999999999999999999999999999999999999999999988753 11126688999
Q ss_pred EEEccCCCCCCCCChhhhccccC-CcEEEccCCccc
Q 040702 183 YFSFSNNPLGGILPRAIGNLSQS-MEDFWMDNCNIS 217 (797)
Q Consensus 183 ~L~Ls~N~l~~~~~~~~~~l~~~-L~~L~L~~n~i~ 217 (797)
.|+|++|+|+.+.+..|..++.. ++.|+|++|.+.
T Consensus 167 ~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 167 LLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp EEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred EEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 99999999998877788777621 467777777776
No 353
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=2.5e-22 Score=209.39 Aligned_cols=149 Identities=15% Similarity=0.123 Sum_probs=117.2
Q ss_pred HHHHHHHhcCCCccccccccCCcceeec----ceEEEEEEEEeccCC------------------cchhHHHHHHHhhhc
Q 040702 504 YLELFQATNRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGG------------------AFKSFDIECGMMKRI 561 (797)
Q Consensus 504 ~~~l~~~~~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~------------------~~~~~~~E~~~l~~l 561 (797)
...+......|...+.||+|+||.||++ ++.||||+++..... ....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3444555566778899999999999985 689999999643211 234688999999999
Q ss_pred cCCceeEeeeeeecCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEE
Q 040702 562 RHRNLIKIISSCSNDDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLL 641 (797)
Q Consensus 562 ~Hpniv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll 641 (797)
+ | +++.+++.. +..|+||||++||+|.+ +.. .....++.|+++|++||| +.+|+||||||+|||+
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl 226 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLV 226 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEE
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEE
Confidence 9 4 666665433 45699999999999988 421 134579999999999999 9999999999999999
Q ss_pred cCCCcEEEEeecCCccCCccCccccccccccCcccccccccc
Q 040702 642 DDNMVAHLSDFGMAKPLLEEDQSLTQTQTLATIGYMAPDEIF 683 (797)
Q Consensus 642 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 683 (797)
+ ++.+||+|||+|+. +..|+|||.+.
T Consensus 227 ~-~~~vkl~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp E-TTEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred E-CCcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence 9 99999999999973 33478898664
No 354
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=2.3e-20 Score=187.32 Aligned_cols=153 Identities=23% Similarity=0.278 Sum_probs=104.2
Q ss_pred CEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCC
Q 040702 24 QTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPN 103 (797)
Q Consensus 24 ~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 103 (797)
+.+|+++|. ++++|..+. ++++.|++++|+|+++.+..|.++++|+.|+|++|+|+ .++...|.++++
T Consensus 14 ~~v~c~~~~---------l~~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~-~~~~~~~~~l~~ 81 (220)
T 2v9t_B 14 NIVDCRGKG---------LTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRS 81 (220)
T ss_dssp TEEECTTSC---------CSSCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCC-EECTTTTTTCSS
T ss_pred CEEEcCCCC---------cCcCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCC-CcCHHHhhCCcC
Confidence 567777776 344555443 46777777777777766667777777777777777776 454455567777
Q ss_pred ccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcE
Q 040702 104 LKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEY 183 (797)
Q Consensus 104 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~ 183 (797)
|++|+|++|+|+.+.+..|.++++|++|+|++|+|+++.|.+|.++++|++|+|++|+|+.+++. .|..+++|+.
T Consensus 82 L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~ 156 (220)
T 2v9t_B 82 LNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG-----TFSPLRAIQT 156 (220)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT-----TTTTCTTCCE
T ss_pred CCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH-----HHhCCCCCCE
Confidence 77777777777755555666777777777777777777677777777777777777777766654 2566666677
Q ss_pred EEccCCCCCC
Q 040702 184 FSFSNNPLGG 193 (797)
Q Consensus 184 L~Ls~N~l~~ 193 (797)
|+|++|++..
T Consensus 157 L~L~~N~~~c 166 (220)
T 2v9t_B 157 MHLAQNPFIC 166 (220)
T ss_dssp EECCSSCEEC
T ss_pred EEeCCCCcCC
Confidence 7777766653
No 355
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.2e-20 Score=214.59 Aligned_cols=204 Identities=18% Similarity=0.234 Sum_probs=154.8
Q ss_pred CCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEc
Q 040702 54 NMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGL 133 (797)
Q Consensus 54 ~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 133 (797)
+++.|+|++|++++ +|..+ .++|+.|+|++|+|+ .+| . .+++|++|+|++|+|++ +|. |.+ +|++|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip-~---~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP-E---LPASLEYLDACDNRLST-LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC-C---CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc-c---ccCCCCEEEccCCCCCC-cch-hhc--CCCEEEC
Confidence 89999999999988 56555 378999999999998 888 2 46899999999999986 666 655 8999999
Q ss_pred cCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccC
Q 040702 134 QKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDN 213 (797)
Q Consensus 134 ~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~ 213 (797)
++|+|+++.+ .+++|++|+|++|.|+.++. .+++|+.|+|++|+|+++ |. |. .+|+.|+|++
T Consensus 128 s~N~l~~lp~----~l~~L~~L~Ls~N~l~~lp~---------~l~~L~~L~Ls~N~L~~l-p~-l~---~~L~~L~Ls~ 189 (571)
T 3cvr_A 128 DNNQLTMLPE----LPALLEYINADNNQLTMLPE---------LPTSLEVLSVRNNQLTFL-PE-LP---ESLEALDVST 189 (571)
T ss_dssp CSSCCSCCCC----CCTTCCEEECCSSCCSCCCC---------CCTTCCEEECCSSCCSCC-CC-CC---TTCCEEECCS
T ss_pred CCCcCCCCCC----cCccccEEeCCCCccCcCCC---------cCCCcCEEECCCCCCCCc-ch-hh---CCCCEEECcC
Confidence 9999997544 68899999999999988764 357899999999999974 44 54 4899999999
Q ss_pred CcccccCChhhhhhhhhHh-------hhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccc------
Q 040702 214 CNISGSIPEEINNLTNLIL-------QLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNL------ 280 (797)
Q Consensus 214 n~i~~~~p~~~~~l~~L~L-------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L------ 280 (797)
|.|+ .+|. +.. .| ++|+|++|+|+. +|..+..+++|+.|+|++|++++..|..+..++..
T Consensus 190 N~L~-~lp~-~~~----~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~~~~~~~ 262 (571)
T 3cvr_A 190 NLLE-SLPA-VPV----RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGP 262 (571)
T ss_dssp SCCS-SCCC-CC------------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHHSCC---C
T ss_pred CCCC-chhh-HHH----hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhcCccccCC
Confidence 9998 5555 443 24 889999999994 67777779999999999999998887776655432
Q ss_pred -cccccCCCCCCCCC
Q 040702 281 -RKLYLGSNLLTSIP 294 (797)
Q Consensus 281 -~~L~L~~N~l~~lp 294 (797)
..+++++|.+..++
T Consensus 263 ~~~~~l~~~~~~~~~ 277 (571)
T 3cvr_A 263 RIYFSMSDGQQNTLH 277 (571)
T ss_dssp EEECCC---------
T ss_pred eeEEeeccccccccc
Confidence 23455555554443
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=2.6e-20 Score=186.89 Aligned_cols=153 Identities=18% Similarity=0.227 Sum_probs=95.9
Q ss_pred CEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCC-ccccCCCCCCEEEccCCcCcccCCCccccCCC
Q 040702 24 QTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVP-TTIFNVSTLKSLYLHSNSLSGRLPSSADVRLP 102 (797)
Q Consensus 24 ~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 102 (797)
+++|+++|.+ +++|..+. ..+++|+|++|+|+++.| ..|.++++|++|+|++|+|+ .++...|.+++
T Consensus 14 ~~l~~s~n~l---------~~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~ 81 (220)
T 2v70_A 14 TTVDCSNQKL---------NKIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGAS 81 (220)
T ss_dssp TEEECCSSCC---------SSCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC-EECTTTTTTCT
T ss_pred CEeEeCCCCc---------ccCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC-EECHHHhCCCC
Confidence 4677777763 33444442 245667777777766543 34666666777777776666 55555556666
Q ss_pred CccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCc
Q 040702 103 NLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLE 182 (797)
Q Consensus 103 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~ 182 (797)
+|++|+|++|+|++..+..|.++++|++|+|++|+|+++.|.+|.++++|++|+|++|+|+.+++. .|..+++|+
T Consensus 82 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~ 156 (220)
T 2v70_A 82 GVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG-----AFDTLHSLS 156 (220)
T ss_dssp TCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT-----TTTTCTTCC
T ss_pred CCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH-----HhcCCCCCC
Confidence 666666666666666566666666666666666666666666666666666666666666666543 355666666
Q ss_pred EEEccCCCCCC
Q 040702 183 YFSFSNNPLGG 193 (797)
Q Consensus 183 ~L~Ls~N~l~~ 193 (797)
.|+|++|++.+
T Consensus 157 ~L~L~~N~l~c 167 (220)
T 2v70_A 157 TLNLLANPFNC 167 (220)
T ss_dssp EEECCSCCEEC
T ss_pred EEEecCcCCcC
Confidence 66666666654
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=1.1e-20 Score=198.41 Aligned_cols=172 Identities=22% Similarity=0.284 Sum_probs=101.8
Q ss_pred CCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCc
Q 040702 17 LGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSS 96 (797)
Q Consensus 17 ~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~ 96 (797)
+..+++|++|++++|.++ .+| .+..+++|++|++++|+++++.+ +.++++|++|+|++|.++ .+|.
T Consensus 42 ~~~l~~L~~L~l~~~~i~---------~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~-~~~~- 107 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIK---------SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK-DLSS- 107 (291)
T ss_dssp HHHHHTCCEEECTTSCCC---------CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CGGG-
T ss_pred hhhcCcccEEEccCCCcc---------cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCC-CChh-
Confidence 345666777777776633 232 35566667777777777666444 666666777777777665 4443
Q ss_pred cccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCC
Q 040702 97 ADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLS 176 (797)
Q Consensus 97 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~ 176 (797)
+..+++|++|+|++|++++. ..+..+++|++|+|++|+|+++ ..|.++++|++|+|++|.++.+++ +.
T Consensus 108 -l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-------l~ 175 (291)
T 1h6t_A 108 -LKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-------LA 175 (291)
T ss_dssp -GTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-------GT
T ss_pred -hccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-------hc
Confidence 44666666666666666643 3466666666666666666654 456666666666666666665543 44
Q ss_pred CCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCccc
Q 040702 177 NCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNIS 217 (797)
Q Consensus 177 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~ 217 (797)
.+++|+.|++++|+++.+ + .+..++ +|+.|++++|.+.
T Consensus 176 ~l~~L~~L~L~~N~i~~l-~-~l~~l~-~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 176 GLTKLQNLYLSKNHISDL-R-ALAGLK-NLDVLELFSQECL 213 (291)
T ss_dssp TCTTCCEEECCSSCCCBC-G-GGTTCT-TCSEEEEEEEEEE
T ss_pred CCCccCEEECCCCcCCCC-h-hhccCC-CCCEEECcCCccc
Confidence 556666666666666543 1 244444 4444444444443
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=3.7e-20 Score=200.86 Aligned_cols=179 Identities=22% Similarity=0.210 Sum_probs=152.3
Q ss_pred CCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCcccc-CCCCccEEEccCccccccCCchhhCCCCCCEEEc
Q 040702 55 MEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADV-RLPNLKELHLWGNNFIGTIPSFIFNASKLSELGL 133 (797)
Q Consensus 55 L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 133 (797)
-+.+++++|+++. +|..+. +.++.|+|++|+|+ .++...|. .+++|++|+|++|+|+++.+..|.++++|++|+|
T Consensus 20 ~~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~-~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 20 SNILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp TTEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCC-EECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCC-ccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEEC
Confidence 3689999999987 565543 46899999999998 77777777 8999999999999999888889999999999999
Q ss_pred cCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhh---hccccCCcEEE
Q 040702 134 QKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAI---GNLSQSMEDFW 210 (797)
Q Consensus 134 ~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~~L~~L~ 210 (797)
++|+|+.+.+..|.++++|++|+|++|+|+.+++. .|.++++|+.|+|++|+|+++.+..| ..++ +|+.|+
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~-----~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~-~L~~L~ 169 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRN-----AFEDMAQLQKLYLSQNQISRFPVELIKDGNKLP-KLMLLD 169 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT-----TTTTCTTCCEEECCSSCCCSCCGGGTC----CT-TCCEEE
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHH-----HhCCcccCCEEECCCCcCCeeCHHHhcCcccCC-cCCEEE
Confidence 99999999999999999999999999999988775 48899999999999999998777766 4566 788999
Q ss_pred ccCCcccccCChhhhhhhhhHhhhccccccccc
Q 040702 211 MDNCNISGSIPEEINNLTNLILQLLSLEGNQLE 243 (797)
Q Consensus 211 L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~ 243 (797)
|++|+|++..+..+..++.+.++.|+|++|.+.
T Consensus 170 L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 170 LSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 999988877777788777755577888888776
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=3.4e-20 Score=186.13 Aligned_cols=154 Identities=22% Similarity=0.223 Sum_probs=138.0
Q ss_pred CCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 040702 2 PSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKS 81 (797)
Q Consensus 2 ~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~ 81 (797)
+|+++|.+++ +|..+ ...+++|+|++|++++..|. ..+..+++|++|+|++|+|+++.+.+|.++++|++
T Consensus 16 l~~s~n~l~~-iP~~~--~~~~~~L~L~~N~l~~~~~~-------~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~ 85 (220)
T 2v70_A 16 VDCSNQKLNK-IPEHI--PQYTAELRLNNNEFTVLEAT-------GIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNE 85 (220)
T ss_dssp EECCSSCCSS-CCSCC--CTTCSEEECCSSCCCEECCC-------CCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred eEeCCCCccc-CccCC--CCCCCEEEcCCCcCCccCch-------hhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCE
Confidence 5789999987 45544 45679999999997655432 34788999999999999999999999999999999
Q ss_pred EEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCcc
Q 040702 82 LYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNY 161 (797)
Q Consensus 82 L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~ 161 (797)
|+|++|+|+ .++...|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.|..|..+++|++|+|++|.
T Consensus 86 L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 164 (220)
T 2v70_A 86 ILLTSNRLE-NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANP 164 (220)
T ss_dssp EECCSSCCC-CCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EECCCCccC-ccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcC
Confidence 999999998 7888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCC
Q 040702 162 LTSST 166 (797)
Q Consensus 162 l~~~~ 166 (797)
++...
T Consensus 165 l~c~c 169 (220)
T 2v70_A 165 FNCNC 169 (220)
T ss_dssp EECSG
T ss_pred CcCCC
Confidence 98643
No 360
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=1.2e-19 Score=183.26 Aligned_cols=154 Identities=23% Similarity=0.236 Sum_probs=120.3
Q ss_pred CCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCC
Q 040702 23 LQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLP 102 (797)
Q Consensus 23 L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 102 (797)
-+.+|.+++. ++++|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+ .+|...|..++
T Consensus 21 ~~~v~c~~~~---------l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~ 88 (229)
T 3e6j_A 21 GTTVDCRSKR---------HASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLT 88 (229)
T ss_dssp TTEEECTTSC---------CSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCT
T ss_pred CCEeEccCCC---------cCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhcccCC
Confidence 4578888887 445565554 67888888888888888888888888888888888886 77777777888
Q ss_pred CccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCc
Q 040702 103 NLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLE 182 (797)
Q Consensus 103 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~ 182 (797)
+|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+.++++|++|+|++|+|+.+++. .|..+++|+
T Consensus 89 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~ 162 (229)
T 3e6j_A 89 QLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG-----AFDRLSSLT 162 (229)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT-----TTTTCTTCC
T ss_pred CcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH-----HHhCCCCCC
Confidence 8888888888888777777788888888888888888 4466778888888888888888877764 367777788
Q ss_pred EEEccCCCCCCC
Q 040702 183 YFSFSNNPLGGI 194 (797)
Q Consensus 183 ~L~Ls~N~l~~~ 194 (797)
.|+|++|++.+.
T Consensus 163 ~L~l~~N~~~c~ 174 (229)
T 3e6j_A 163 HAYLFGNPWDCE 174 (229)
T ss_dssp EEECTTSCBCTT
T ss_pred EEEeeCCCccCC
Confidence 888888877654
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=3.2e-20 Score=213.54 Aligned_cols=183 Identities=21% Similarity=0.287 Sum_probs=110.9
Q ss_pred CCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 040702 4 LTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLY 83 (797)
Q Consensus 4 l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~ 83 (797)
|+++.+.+.++ +..+.+|++|+|++|.++ .+| .+..+++|+.|+|++|+|.++.| |.++++|+.|+
T Consensus 28 l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~---------~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 28 LKKKSVTDAVT--QNELNSIDQIIANNSDIK---------SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp TTCSCTTSEEC--HHHHTTCCCCBCTTCCCC---------CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred ccCCCcccccc--hhcCCCCCEEECcCCCCC---------CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 34444444433 456667777777777633 233 35666677777777777766544 66677777777
Q ss_pred ccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCc
Q 040702 84 LHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLT 163 (797)
Q Consensus 84 Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~ 163 (797)
|++|.|+ .+| .+..+++|++|+|++|+|.+. ..+..+++|+.|+|++|+|+++ ..|..+++|+.|+|++|.|+
T Consensus 94 Ls~N~l~-~l~--~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~ 166 (605)
T 1m9s_A 94 LDENKIK-DLS--SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 166 (605)
T ss_dssp CCSSCCC-CCT--TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCC
T ss_pred CcCCCCC-CCh--hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCC
Confidence 7777776 444 244666677777777766642 3466666667777766666654 45666666666666666666
Q ss_pred CCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCccc
Q 040702 164 SSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNIS 217 (797)
Q Consensus 164 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~ 217 (797)
.+++ +..+++|+.|+|++|+|.++ ..+..++ +|+.|+|++|.+.
T Consensus 167 ~~~~-------l~~l~~L~~L~Ls~N~i~~l--~~l~~l~-~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 167 DIVP-------LAGLTKLQNLYLSKNHISDL--RALAGLK-NLDVLELFSQECL 210 (605)
T ss_dssp CCGG-------GTTCTTCCEEECCSSCCCBC--GGGTTCT-TCSEEECCSEEEE
T ss_pred Cchh-------hccCCCCCEEECcCCCCCCC--hHHccCC-CCCEEEccCCcCc
Confidence 5543 44556666666666666643 2355554 5555555555554
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.8e-19 Score=180.81 Aligned_cols=154 Identities=18% Similarity=0.232 Sum_probs=137.3
Q ss_pred CCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEcc
Q 040702 55 MEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQ 134 (797)
Q Consensus 55 L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 134 (797)
-+.+++++|+++.+ |..+. ++|+.|+|++|+|+ .++...|..+++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 13 ~~~v~c~~~~l~~i-P~~l~--~~l~~L~l~~n~i~-~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls 88 (220)
T 2v9t_B 13 NNIVDCRGKGLTEI-PTNLP--ETITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 88 (220)
T ss_dssp TTEEECTTSCCSSC-CSSCC--TTCCEEECCSSCCC-EECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECC
T ss_pred CCEEEcCCCCcCcC-CCccC--cCCCEEECCCCcCC-CcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECC
Confidence 36799999999874 55543 68999999999998 7888788899999999999999998889999999999999999
Q ss_pred CCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCC
Q 040702 135 KNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNC 214 (797)
Q Consensus 135 ~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n 214 (797)
+|+|+.+.+..|.++++|++|+|++|+|+.+++. .|..+++|+.|+|++|+|+++.+..|..++ +|+.|++++|
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N 162 (220)
T 2v9t_B 89 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVD-----AFQDLHNLNLLSLYDNKLQTIAKGTFSPLR-AIQTMHLAQN 162 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTTCCEEECCSSCCSCCCTTTTTTCT-TCCEEECCSS
T ss_pred CCcCCccCHhHccCCCCCCEEECCCCCCCEeCHH-----HcCCCCCCCEEECCCCcCCEECHHHHhCCC-CCCEEEeCCC
Confidence 9999998888999999999999999999998876 488899999999999999999888898887 8999999999
Q ss_pred cccc
Q 040702 215 NISG 218 (797)
Q Consensus 215 ~i~~ 218 (797)
.+..
T Consensus 163 ~~~c 166 (220)
T 2v9t_B 163 PFIC 166 (220)
T ss_dssp CEEC
T ss_pred CcCC
Confidence 8874
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=3.3e-20 Score=194.72 Aligned_cols=142 Identities=21% Similarity=0.312 Sum_probs=77.4
Q ss_pred EEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCC
Q 040702 57 WMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKN 136 (797)
Q Consensus 57 ~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 136 (797)
.+.+..+.+.++.+ +..+++|+.|++++|.++ .++. +..+++|++|+|++|++++..+ +..+++|++|+|++|
T Consensus 28 ~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~~--~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 28 KDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHhcCCCcccccc--hhhcCcccEEEccCCCcc-cChh--HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCC
Confidence 33445555544322 334566666666666665 4443 3456666666666666664433 666666666666666
Q ss_pred cCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcc
Q 040702 137 SFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNI 216 (797)
Q Consensus 137 ~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i 216 (797)
+|+++. .|.++++|++|+|++|+++.++ .+..+++|+.|++++|+++++ ..+..++ +|+.|++++|.+
T Consensus 101 ~l~~~~--~l~~l~~L~~L~L~~n~i~~~~-------~l~~l~~L~~L~l~~n~l~~~--~~l~~l~-~L~~L~L~~N~l 168 (291)
T 1h6t_A 101 KVKDLS--SLKDLKKLKSLSLEHNGISDIN-------GLVHLPQLESLYLGNNKITDI--TVLSRLT-KLDTLSLEDNQI 168 (291)
T ss_dssp CCCCGG--GGTTCTTCCEEECTTSCCCCCG-------GGGGCTTCCEEECCSSCCCCC--GGGGGCT-TCSEEECCSSCC
T ss_pred cCCCCh--hhccCCCCCEEECCCCcCCCCh-------hhcCCCCCCEEEccCCcCCcc--hhhccCC-CCCEEEccCCcc
Confidence 666432 2666666666666666665542 245556666666666666544 3344443 344444444433
Q ss_pred c
Q 040702 217 S 217 (797)
Q Consensus 217 ~ 217 (797)
+
T Consensus 169 ~ 169 (291)
T 1h6t_A 169 S 169 (291)
T ss_dssp C
T ss_pred c
Confidence 3
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=4.5e-20 Score=212.28 Aligned_cols=190 Identities=23% Similarity=0.297 Sum_probs=93.4
Q ss_pred CEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccC
Q 040702 56 EWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQK 135 (797)
Q Consensus 56 ~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 135 (797)
..+.++.+.+..+.+ +..+++|+.|+|++|.|+ .+|. +..+++|++|+|++|+|++..+ +..+++|+.|+|++
T Consensus 24 ~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~~--l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 24 IKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCTT--GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CChH--HccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 334444444444322 334455555555555554 4432 3345555555555555554333 55555555555555
Q ss_pred CcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCc
Q 040702 136 NSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCN 215 (797)
Q Consensus 136 N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~ 215 (797)
|+|+++. .|..+++|++|+|++|.|+.++ .+..+++|+.|+|++|++.++ ..+..++ +|+.|+|++|.
T Consensus 97 N~l~~l~--~l~~l~~L~~L~Ls~N~l~~l~-------~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~-~L~~L~Ls~N~ 164 (605)
T 1m9s_A 97 NKIKDLS--SLKDLKKLKSLSLEHNGISDIN-------GLVHLPQLESLYLGNNKITDI--TVLSRLT-KLDTLSLEDNQ 164 (605)
T ss_dssp SCCCCCT--TSTTCTTCCEEECTTSCCCCCG-------GGGGCTTCSEEECCSSCCCCC--GGGGSCT-TCSEEECCSSC
T ss_pred CCCCCCh--hhccCCCCCEEEecCCCCCCCc-------cccCCCccCEEECCCCccCCc--hhhcccC-CCCEEECcCCc
Confidence 5555321 3555555555555555555432 144455555555555555543 3344443 44444444444
Q ss_pred ccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccC
Q 040702 216 ISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFV 270 (797)
Q Consensus 216 i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 270 (797)
+.+..| +..+++| +.|+|++|+|+++ ..+..+++|+.|+|++|++...+
T Consensus 165 l~~~~~--l~~l~~L--~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 165 ISDIVP--LAGLTKL--QNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CCCCGG--GTTCTTC--CEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred CCCchh--hccCCCC--CEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 443333 3444444 5555555555533 23555666666666666665443
No 365
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.80 E-value=1.9e-20 Score=200.42 Aligned_cols=263 Identities=13% Similarity=0.067 Sum_probs=161.1
Q ss_pred CCCCCEEEcccCccc--ccCCccccCCCCCCEEEccCCcCcccCCCccccC--------CCCccEEEccCccccccCCch
Q 040702 52 LHNMEWMAFSFNKVV--GVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVR--------LPNLKELHLWGNNFIGTIPSF 121 (797)
Q Consensus 52 l~~L~~L~ls~N~i~--~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~--------l~~L~~L~L~~N~l~~~~~~~ 121 (797)
+++|++|||++|+|. ...+..+ +.++.+.+..| .+|..+|.+ +++|++|+|.+ +++.+.+.+
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~----~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~a 119 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMAN----FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAA 119 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTT----EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTT
T ss_pred hccCeEEecCcceeEEecCccccc---ccccccccccc----ccCHHHhcccccccccccCCCcEEECCc-cccchhHHH
Confidence 566777777777766 3222222 22444555555 345666666 67777777766 666566666
Q ss_pred hhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccC----cCCCCCccccccCCCCCCCc-EEEccCCCCCCCCC
Q 040702 122 IFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYL----TSSTPELSSLSSLSNCKYLE-YFSFSNNPLGGILP 196 (797)
Q Consensus 122 ~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l----~~~~~~~~~~~~l~~l~~L~-~L~Ls~N~l~~~~~ 196 (797)
|.++++|++|+|++|.+..+.+.+|.++.++..+.+..+.. ..+... .|.++..|+ .+.+.... ..+
T Consensus 120 F~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~-----~f~~~~~L~~~i~~~~~~---~l~ 191 (329)
T 3sb4_A 120 FKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHF-----AFIEGEPLETTIQVGAMG---KLE 191 (329)
T ss_dssp TTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTS-----CEEESCCCEEEEEECTTC---CHH
T ss_pred hhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccc-----ccccccccceeEEecCCC---cHH
Confidence 66677777777777766666666676666666665555322 111111 233444444 33332211 111
Q ss_pred hhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhh-cCCCCCcEEEccCCcCcccCCCCcc
Q 040702 197 RAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDL-CRLAALFQLDLGGNKLSGFVPACSG 275 (797)
Q Consensus 197 ~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (797)
..+.... -...++ +.+.+.++-.. .....+ ..+++|+.++|++|+++.+.+.+|.
T Consensus 192 ~~~~~~~---------------------~~~~~~--~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~ 247 (329)
T 3sb4_A 192 DEIMKAG---------------------LQPRDI--NFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFA 247 (329)
T ss_dssp HHHHHTT---------------------CCGGGC--SEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTT
T ss_pred HHHhhcc---------------------cCcccc--ceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhh
Confidence 1111000 001111 23333322111 111111 1367888888888888888888888
Q ss_pred CCccccccccCCCCCCCCCC-CCCCCCccc-EEEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccce
Q 040702 276 NLTNLRKLYLGSNLLTSIPS-TLWNLKDIL-HLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQY 353 (797)
Q Consensus 276 ~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 353 (797)
++++|+.++|++| ++.|+. +|.++++|+ .+++++ .++.+.+.+|.++++|+.+++++|.++.+.+.+|.++++|+.
T Consensus 248 ~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ 325 (329)
T 3sb4_A 248 QKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKL 325 (329)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCE
T ss_pred CCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhh
Confidence 8888998888887 877866 666788888 888888 777777888999999999999999998888889999999988
Q ss_pred ecc
Q 040702 354 LFL 356 (797)
Q Consensus 354 L~L 356 (797)
++.
T Consensus 326 ly~ 328 (329)
T 3sb4_A 326 IYK 328 (329)
T ss_dssp EEC
T ss_pred hcc
Confidence 864
No 366
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.80 E-value=1.8e-20 Score=221.08 Aligned_cols=225 Identities=20% Similarity=0.221 Sum_probs=100.3
Q ss_pred CCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCcccc
Q 040702 20 PSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADV 99 (797)
Q Consensus 20 l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~ 99 (797)
.+.++.|+|++|.+... |..++..+ .++.+ ++..++++.|++. +.|..|..+++|+.|+|++|.|. .+|..+|
T Consensus 172 ~~~~~~l~L~~n~~~~~-~~~~l~~l--~Ls~~-~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~- 244 (727)
T 4b8c_D 172 TPLTPKIELFANGKDEA-NQALLQHK--KLSQY-SIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIF- 244 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGG-
T ss_pred CCccceEEeeCCCCCcc-hhhHhhcC--ccCcc-cccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhc-
Confidence 35678888888875432 21111100 00000 1222333344443 45777777888888888888887 7777776
Q ss_pred CCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCC
Q 040702 100 RLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCK 179 (797)
Q Consensus 100 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~ 179 (797)
.+++|++|+|++|.|+ .+|..|.++++|++|+|++|+|+ .+|..|++|++|++|+|++|.|+.+|.. |..++
T Consensus 245 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~------~~~l~ 316 (727)
T 4b8c_D 245 KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWE------FGNLC 316 (727)
T ss_dssp GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSS------TTSCT
T ss_pred CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChh------hhcCC
Confidence 6778888888888877 66777777888888888888877 4477777777888888888777776653 66677
Q ss_pred CCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEE
Q 040702 180 YLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQL 259 (797)
Q Consensus 180 ~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 259 (797)
+|+.|+|++|+|.+.+|..+..+. .. ...|+|++|.+++.+|.. |..|
T Consensus 317 ~L~~L~L~~N~l~~~~p~~~~~~~-------------------------~~-~~~l~l~~N~l~~~~p~~------l~~l 364 (727)
T 4b8c_D 317 NLQFLGVEGNPLEKQFLKILTEKS-------------------------VT-GLIFYLRDNRPEIPLPHE------RRFI 364 (727)
T ss_dssp TCCCEECTTSCCCSHHHHHHHHHH-------------------------HH-HHHHHHHHCCCCCCCCCC----------
T ss_pred CccEEeCCCCccCCCChHHHhhcc-------------------------hh-hhHHhhccCcccCcCccc------ccee
Confidence 777777777777766665554432 11 134667777776665543 3444
Q ss_pred EccCC--------cCcccCCCCccCCccccccccCCCCCC
Q 040702 260 DLGGN--------KLSGFVPACSGNLTNLRKLYLGSNLLT 291 (797)
Q Consensus 260 ~Ls~N--------~l~~~~~~~~~~l~~L~~L~L~~N~l~ 291 (797)
+++.| .+....+..+..+..++...+++|.+.
T Consensus 365 ~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 365 EINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp -------------------------------------CCC
T ss_pred EeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 55555 333344444555666667777777663
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.79 E-value=1.1e-19 Score=187.60 Aligned_cols=163 Identities=18% Similarity=0.276 Sum_probs=111.3
Q ss_pred CCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEE
Q 040702 3 SLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSL 82 (797)
Q Consensus 3 ~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L 82 (797)
+|++|.+++.. .+..+++|++|+|++|++ +++| .+..+++|++|++++|+|+++.+ |.++++|+.|
T Consensus 25 ~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i---------~~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 25 NLGKQSVTDLV--SQKELSGVQNFNGDNSNI---------QSLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHTCSCTTSEE--CHHHHTTCSEEECTTSCC---------CCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HhcCCCccccc--chhhcCcCcEEECcCCCc---------ccch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 45666666554 466777777777777763 3344 56677777777777777776544 7777777777
Q ss_pred EccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccC
Q 040702 83 YLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYL 162 (797)
Q Consensus 83 ~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l 162 (797)
+|++|+++ .+|...+ ++|++|+|++|++++. ..+..+++|++|+|++|+|+++. .|..+++|++|+|++|+|
T Consensus 91 ~L~~N~l~-~l~~~~~---~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~~--~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 91 SVNRNRLK-NLNGIPS---ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp ECCSSCCS-CCTTCCC---SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBCG--GGGGCTTCCEEECTTSCC
T ss_pred ECCCCccC-CcCcccc---CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCCh--HHccCCCCCEEECCCCcC
Confidence 77777776 5554332 7777777777777653 34677777777777777777652 577777777777777777
Q ss_pred cCCCCCccccccCCCCCCCcEEEccCCCCCCC
Q 040702 163 TSSTPELSSLSSLSNCKYLEYFSFSNNPLGGI 194 (797)
Q Consensus 163 ~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 194 (797)
+.+ . .+..+++|+.|++++|++.+.
T Consensus 163 ~~~-~------~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 163 TNT-G------GLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CBC-T------TSTTCCCCCEEEEEEEEEECC
T ss_pred cch-H------HhccCCCCCEEeCCCCcccCC
Confidence 766 1 266667777777777776654
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=4.1e-21 Score=219.62 Aligned_cols=166 Identities=28% Similarity=0.236 Sum_probs=101.4
Q ss_pred ccccCChhhhhhhhhHhhhcc-cccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCC
Q 040702 216 ISGSIPEEINNLTNLILQLLS-LEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIP 294 (797)
Q Consensus 216 i~~~~p~~~~~l~~L~L~~L~-Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp 294 (797)
+.+..|..++++++| +.|+ ++.|.+. +|..+.+++|.++.+.+. .|+.|+|++|.|+.+|
T Consensus 397 ~~~~~~~~l~~l~~L--~~L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~lp 457 (567)
T 1dce_A 397 PLLYEKETLQYFSTL--KAVDPMRAAYLD-----------DLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTVLC 457 (567)
T ss_dssp TGGGHHHHHHHHHHH--HHHCGGGHHHHH-----------HHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSSCC
T ss_pred cccCCHHHHHHHHhc--ccCcchhhcccc-----------hhhhhhhhcccccccCcc------CceEEEecCCCCCCCc
Confidence 445666777777776 7776 5665543 233445555555543221 3566666666666666
Q ss_pred CCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCC-Chhhhccc
Q 040702 295 STLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSI-PNSIGDLI 373 (797)
Q Consensus 295 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~ 373 (797)
. +..+++|+.|+|++|.|+ .+|..|+.+++|+.|+|++|+|++ +| .|+++++|+.|+|++|+|++.. |..++.++
T Consensus 458 ~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~ 533 (567)
T 1dce_A 458 H-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCP 533 (567)
T ss_dssp C-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCT
T ss_pred C-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCC
Confidence 5 666666666666666666 455566666666666666666665 34 5666666666666666666554 66666666
Q ss_pred cCCeeeecCCcCCCCCCh---hhhccCCCCeEEc
Q 040702 374 SLKSLNLSNNNLSGTIPI---SLEKLLDLKDINV 404 (797)
Q Consensus 374 ~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~l 404 (797)
+|+.|+|++|++++.+|. .+..+++|+.|++
T Consensus 534 ~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 534 RLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp TCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 677777777766655442 2334666666653
No 369
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.79 E-value=3.8e-20 Score=198.15 Aligned_cols=288 Identities=15% Similarity=0.115 Sum_probs=203.6
Q ss_pred CCCCCEEEcccCcccccCCccccC-CCCCCEEEccCCcCcc-cCCCccccCCCCccEEEccCccccccCCchhhC-----
Q 040702 52 LHNMEWMAFSFNKVVGVVPTTIFN-VSTLKSLYLHSNSLSG-RLPSSADVRLPNLKELHLWGNNFIGTIPSFIFN----- 124 (797)
Q Consensus 52 l~~L~~L~ls~N~i~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----- 124 (797)
+.+++.|.++++ +....-..+.. +++|+.|||++|+|.. ..+... ++.+..+.+..|. +.+.+|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~---I~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANF---VPAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTE---ECTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccc---ccccccccccccc---cCHHHhccccccc
Confidence 557888888864 22222223333 7889999999999871 112222 3335666776664 44567888
Q ss_pred ---CCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCC----CCCCCCCh
Q 040702 125 ---ASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNN----PLGGILPR 197 (797)
Q Consensus 125 ---l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N----~l~~~~~~ 197 (797)
+++|++|+|.+ .++.+.+.+|.++++|+.|++++|.++.+++. .|.++.++..+.+..+ ....+...
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~-----aF~~~~~l~~l~~~~~~~~~~~~~i~~~ 170 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPE-----ALADSVTAIFIPLGSSDAYRFKNRWEHF 170 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTT-----SSCTTTCEEEECTTCTHHHHTSTTTTTS
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchh-----hhcCCCceEEecCcchhhhhcccccccc
Confidence 99999999999 88889999999999999999999999888876 4777777777766652 22334444
Q ss_pred hhhccccCCc-EEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccC
Q 040702 198 AIGNLSQSME-DFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGN 276 (797)
Q Consensus 198 ~~~~l~~~L~-~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (797)
+|.++. .|+ .+.+.... .++.. .........++..+.+.++-...........
T Consensus 171 ~f~~~~-~L~~~i~~~~~~----------~l~~~---------------~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~ 224 (329)
T 3sb4_A 171 AFIEGE-PLETTIQVGAMG----------KLEDE---------------IMKAGLQPRDINFLTIEGKLDNADFKLIRDY 224 (329)
T ss_dssp CEEESC-CCEEEEEECTTC----------CHHHH---------------HHHTTCCGGGCSEEEEEECCCHHHHHHHHHH
T ss_pred cccccc-ccceeEEecCCC----------cHHHH---------------HhhcccCccccceEEEeeeecHHHHHHHHHh
Confidence 555544 343 23222111 11111 0000112345566666655322111111123
Q ss_pred CccccccccCCCCCCCCCC-CCCCCCcccEEEccCCcCCCCCCcccccccccc-EEeccCcccccccCccccCCccccee
Q 040702 277 LTNLRKLYLGSNLLTSIPS-TLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLV-QLDLSMNNFSCVIPTKIGGLKDLQYL 354 (797)
Q Consensus 277 l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L 354 (797)
+++|+.++|++|.++.+|. .|.++.+|+.+++++| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 7899999999999999987 6778999999999998 8878889999999999 999998 7887889999999999999
Q ss_pred cccCccccCCCChhhhccccCCeeee
Q 040702 355 FLEYNRLQGSIPNSIGDLISLKSLNL 380 (797)
Q Consensus 355 ~Ls~N~l~~~~p~~~~~l~~L~~L~L 380 (797)
++++|+++...+.+|.++++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 99999999888889999999999874
No 370
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=1.6e-18 Score=175.11 Aligned_cols=155 Identities=24% Similarity=0.210 Sum_probs=135.2
Q ss_pred CCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEcc
Q 040702 55 MEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQ 134 (797)
Q Consensus 55 L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 134 (797)
.+.++++++++..+ |..+. ++|++|+|++|+|+ .++...|..+++|++|+|++|+|+.+.+..|..+++|++|+|+
T Consensus 21 ~~~v~c~~~~l~~i-p~~~~--~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 21 GTTVDCRSKRHASV-PAGIP--TNAQILYLHDNQIT-KLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp TTEEECTTSCCSSC-CSCCC--TTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEeEccCCCcCcc-CCCCC--CCCCEEEcCCCccC-ccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 67899999999864 54443 88999999999998 6666677889999999999999987777888999999999999
Q ss_pred CCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCC
Q 040702 135 KNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNC 214 (797)
Q Consensus 135 ~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n 214 (797)
+|+|+++.+..|.++++|++|+|++|+|+.++.. +..+++|+.|+|++|+|+++.+..|..++ +|+.|++++|
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N 169 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRG------IERLTHLTHLALDQNQLKSIPHGAFDRLS-SLTHAYLFGN 169 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTT------GGGCTTCSEEECCSSCCCCCCTTTTTTCT-TCCEEECTTS
T ss_pred CCcCCccChhHhCcchhhCeEeccCCcccccCcc------cccCCCCCEEECCCCcCCccCHHHHhCCC-CCCEEEeeCC
Confidence 9999999899999999999999999999988765 67788999999999999988888888887 8999999999
Q ss_pred cccccC
Q 040702 215 NISGSI 220 (797)
Q Consensus 215 ~i~~~~ 220 (797)
.+....
T Consensus 170 ~~~c~c 175 (229)
T 3e6j_A 170 PWDCEC 175 (229)
T ss_dssp CBCTTB
T ss_pred CccCCc
Confidence 988543
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=7.3e-19 Score=173.26 Aligned_cols=151 Identities=14% Similarity=0.211 Sum_probs=67.5
Q ss_pred CCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEE
Q 040702 52 LHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSEL 131 (797)
Q Consensus 52 l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 131 (797)
+++|+.|++++|+++. +| .+..+++|++|++++|.++ .++ .+..+++|++|+|++|++++..+..|..+++|++|
T Consensus 43 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~-~~~--~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 43 MNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHAT-NYN--PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCS-CCG--GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred cCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCC-cch--hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 3444444444444442 22 3444444444444444443 222 22344445555555544444444444444555555
Q ss_pred EccCCcCcccCCccccCCCCCCeeeccCcc-CcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEE
Q 040702 132 GLQKNSFSGSIPNTFGNLRNLKWLGLNDNY-LTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFW 210 (797)
Q Consensus 132 ~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~-l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~ 210 (797)
+|++|+|++..+..|.++++|++|+|++|. ++.++ .+..+++|+.|++++|+++++. .+..++ +|+.|+
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-------~l~~l~~L~~L~l~~n~i~~~~--~l~~l~-~L~~L~ 187 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-------PLKTLPELKSLNIQFDGVHDYR--GIEDFP-KLNQLY 187 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-------GGGGCSSCCEEECTTBCCCCCT--TGGGCS-SCCEEE
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-------hhcCCCCCCEEECCCCCCcChH--HhccCC-CCCEEE
Confidence 555555544444444455555555555554 43332 1344444555555555544322 344443 455555
Q ss_pred ccCCccc
Q 040702 211 MDNCNIS 217 (797)
Q Consensus 211 L~~n~i~ 217 (797)
+++|+|.
T Consensus 188 l~~N~i~ 194 (197)
T 4ezg_A 188 AFSQTIG 194 (197)
T ss_dssp ECBC---
T ss_pred eeCcccC
Confidence 5555443
No 372
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=2.9e-21 Score=220.81 Aligned_cols=216 Identities=18% Similarity=0.087 Sum_probs=170.5
Q ss_pred hCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccC-cCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhc
Q 040702 123 FNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYL-TSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGN 201 (797)
Q Consensus 123 ~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l-~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 201 (797)
...++|+.|+|++|+|+ .+|..++++++|+.|++++|.. ...+. .+..+.+.+..|..++.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~-----------------ll~~~~~~~~~~~~l~~ 407 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL-----------------LMRALDPLLYEKETLQY 407 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH-----------------HHHHHCTGGGHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH-----------------HHHhcccccCCHHHHHH
Confidence 45677888888888887 4577788888888888866642 11100 01122244567788888
Q ss_pred cccCCcEEE-ccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccc
Q 040702 202 LSQSMEDFW-MDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNL 280 (797)
Q Consensus 202 l~~~L~~L~-L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 280 (797)
++ +|+.|+ ++.|.+ .+| +.+.+++|.+..+.+ ..|+.|+|++|+|+++ |. ++.+++|
T Consensus 408 l~-~L~~L~~l~~n~~-----------~~L--~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L 465 (567)
T 1dce_A 408 FS-TLKAVDPMRAAYL-----------DDL--RSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLV 465 (567)
T ss_dssp HH-HHHHHCGGGHHHH-----------HHH--HHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTC
T ss_pred HH-hcccCcchhhccc-----------chh--hhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccC
Confidence 87 788777 555543 344 788889999885433 2489999999999975 55 9999999
Q ss_pred cccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCccccccc-CccccCCcccceecccCc
Q 040702 281 RKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVI-PTKIGGLKDLQYLFLEYN 359 (797)
Q Consensus 281 ~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N 359 (797)
+.|+|++|.|+.+|..+..+++|+.|+|++|.|++ +| .++.+++|+.|+|++|+|++.. |..|+.+++|+.|+|++|
T Consensus 466 ~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N 543 (567)
T 1dce_A 466 THLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGN 543 (567)
T ss_dssp CEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTS
T ss_pred cEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCC
Confidence 99999999999999999999999999999999997 56 8999999999999999999887 999999999999999999
Q ss_pred cccCCCCh---hhhccccCCeeee
Q 040702 360 RLQGSIPN---SIGDLISLKSLNL 380 (797)
Q Consensus 360 ~l~~~~p~---~~~~l~~L~~L~L 380 (797)
++++..|. .+..+++|+.|++
T Consensus 544 ~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 544 SLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp GGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred cCCCCccHHHHHHHHCcccCccCC
Confidence 99976553 3455899999875
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=6.4e-19 Score=181.92 Aligned_cols=172 Identities=21% Similarity=0.257 Sum_probs=147.7
Q ss_pred hhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccE
Q 040702 226 NLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILH 305 (797)
Q Consensus 226 ~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~ 305 (797)
.+.++ ..+++++|.++++. .+..+++|+.|++++|.++.+ + .+..+++|+.|+|++|.++.+|. +..+++|+.
T Consensus 17 ~l~~l--~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANA--VKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEE 89 (263)
T ss_dssp HHHHH--HHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCE
T ss_pred HHHHH--HHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh-hccCCCCCE
Confidence 45555 78899999998554 678899999999999999865 3 68899999999999999999887 888999999
Q ss_pred EEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcC
Q 040702 306 LNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNL 385 (797)
Q Consensus 306 L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 385 (797)
|++++|++++..+ +.. ++|+.|++++|++++. ..+..+++|+.|+|++|++++. + .+..+++|+.|+|++|++
T Consensus 90 L~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 90 LSVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp EECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCC
T ss_pred EECCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcC
Confidence 9999999986543 223 8999999999999864 3588999999999999999864 4 689999999999999999
Q ss_pred CCCCChhhhccCCCCeEEccCCcCcccC
Q 040702 386 SGTIPISLEKLLDLKDINVSFNRLEGEI 413 (797)
Q Consensus 386 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 413 (797)
++. ..+..+++|+.|++++|++++.+
T Consensus 163 ~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 163 TNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp CBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred cch--HHhccCCCCCEEeCCCCcccCCc
Confidence 976 67889999999999999998764
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=8.7e-19 Score=172.70 Aligned_cols=155 Identities=16% Similarity=0.160 Sum_probs=114.2
Q ss_pred CCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCc
Q 040702 17 LGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSS 96 (797)
Q Consensus 17 ~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~ 96 (797)
.+.+++|++|++++|.+ +.+| .+..+++|++|++++|++.. +..+.++++|++|+|++|++++..+..
T Consensus 40 ~~~l~~L~~L~l~~n~i---------~~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~ 107 (197)
T 4ezg_A 40 EAQMNSLTYITLANINV---------TDLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPN 107 (197)
T ss_dssp HHHHHTCCEEEEESSCC---------SCCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCC
T ss_pred hhhcCCccEEeccCCCc---------cChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChh
Confidence 35667888888888873 3455 57777888888888887754 346778888888888888887444443
Q ss_pred cccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCc-CcccCCccccCCCCCCeeeccCccCcCCCCCccccccC
Q 040702 97 ADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNS-FSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSL 175 (797)
Q Consensus 97 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l 175 (797)
+..+++|++|+|++|++++..+..|..+++|++|+|++|+ ++.+ | .|.++++|++|++++|.++.++. +
T Consensus 108 -l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~-~l~~l~~L~~L~l~~n~i~~~~~-------l 177 (197)
T 4ezg_A 108 -LSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-M-PLKTLPELKSLNIQFDGVHDYRG-------I 177 (197)
T ss_dssp -CTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-G-GGGGCSSCCEEECTTBCCCCCTT-------G
T ss_pred -hcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-H-hhcCCCCCCEEECCCCCCcChHH-------h
Confidence 4578888888888888887777788888888888888887 6654 3 58888888888888888877652 6
Q ss_pred CCCCCCcEEEccCCCCCC
Q 040702 176 SNCKYLEYFSFSNNPLGG 193 (797)
Q Consensus 176 ~~l~~L~~L~Ls~N~l~~ 193 (797)
..+++|+.|++++|++.+
T Consensus 178 ~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 178 EDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp GGCSSCCEEEECBC----
T ss_pred ccCCCCCEEEeeCcccCC
Confidence 677788888888888763
No 375
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=7.7e-19 Score=207.17 Aligned_cols=222 Identities=21% Similarity=0.186 Sum_probs=82.8
Q ss_pred CCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEE
Q 040702 53 HNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELG 132 (797)
Q Consensus 53 ~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (797)
+.++.|+|++|.+... +.. .|+.++|++|.|.+ ++++.|.+. ..+..|..+++|+.|+
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~-----~l~~l~Ls~~~i~~---------------~~~~~n~~~-~~~~~~~~l~~L~~L~ 230 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQA-----LLQHKKLSQYSIDE---------------DDDIENRMV-MPKDSKYDDQLWHALD 230 (727)
T ss_dssp -----------------------------------------------------------------------CCCCCCEEE
T ss_pred CccceEEeeCCCCCcc-hhh-----HhhcCccCcccccC---------------cccccccee-cChhhhccCCCCcEEE
Confidence 4577788888888763 332 34555666665541 122334433 4455555555555555
Q ss_pred ccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEcc
Q 040702 133 LQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMD 212 (797)
Q Consensus 133 L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~ 212 (797)
|++|+|..+. ..+.++++|++|+|++|.|+.+|.. |.++++|++|+|++|+|+ .+|..|+.++ +|+.|+|+
T Consensus 231 Ls~n~l~~l~-~~~~~l~~L~~L~Ls~N~l~~lp~~------~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~-~L~~L~L~ 301 (727)
T 4b8c_D 231 LSNLQIFNIS-ANIFKYDFLTRLYLNGNSLTELPAE------IKNLSNLRVLDLSHNRLT-SLPAELGSCF-QLKYFYFF 301 (727)
T ss_dssp CTTSCCSCCC-GGGGGCCSCSCCBCTTSCCSCCCGG------GGGGTTCCEEECTTSCCS-SCCSSGGGGT-TCSEEECC
T ss_pred CCCCCCCCCC-hhhcCCCCCCEEEeeCCcCcccChh------hhCCCCCCEEeCcCCcCC-ccChhhcCCC-CCCEEECC
Confidence 5555555332 2233555555555555555544432 445555555555555555 3355555555 56666666
Q ss_pred CCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCC-CCcEEEccCCcCcccCCCCccCCccccccccCCCC--
Q 040702 213 NCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLA-ALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNL-- 289 (797)
Q Consensus 213 ~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-- 289 (797)
+|.|+ .+|..|+++++| ++|+|++|.|++.+|..+..+. .+..|+|++|.+++.+|. .|+.|++++|.
T Consensus 302 ~N~l~-~lp~~~~~l~~L--~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~ 372 (727)
T 4b8c_D 302 DNMVT-TLPWEFGNLCNL--QFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEP 372 (727)
T ss_dssp SSCCC-CCCSSTTSCTTC--CCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C------------
T ss_pred CCCCC-ccChhhhcCCCc--cEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeeccccc
Confidence 66554 445556666666 7777777777766666665432 123478999999987775 46677777771
Q ss_pred ---CCCCCC----CCCCCCcccEEEccCCcCC
Q 040702 290 ---LTSIPS----TLWNLKDILHLNLSSNFFT 314 (797)
Q Consensus 290 ---l~~lp~----~~~~l~~L~~L~l~~N~l~ 314 (797)
+..++. .+..+.++....++.|-+.
T Consensus 373 ~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 373 QREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp -----------------------------CCC
T ss_pred ccccCCccccccchhhcccccceeeeeccccc
Confidence 122322 3344555666677777665
No 376
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.75 E-value=1.2e-17 Score=182.77 Aligned_cols=263 Identities=12% Similarity=0.086 Sum_probs=141.6
Q ss_pred CCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCee
Q 040702 76 VSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWL 155 (797)
Q Consensus 76 l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L 155 (797)
...++.+.+.+ .++ .|+..+|.+. +|+.+.|..| ++.+...+|.+ .+|+++.|.+ .++.+.+.+|.++++|+.+
T Consensus 112 ~~~l~~i~ip~-~i~-~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 112 LKGYNEIILPN-SVK-SIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp CSSCSEEECCT-TCC-EECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred cCCccEEEECC-ccC-EehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCee
Confidence 35566666653 354 5666666553 5777776655 55555566666 3577777764 5666666677777777777
Q ss_pred eccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhc
Q 040702 156 GLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLL 235 (797)
Q Consensus 156 ~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L 235 (797)
+|++|.++.++.. .|. ..+|+.+.|..| +..+...+|.+++ +|+.+.+.+| ++.+
T Consensus 186 ~l~~n~l~~I~~~-----aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~-~L~~l~l~~~-l~~I---------------- 240 (401)
T 4fdw_A 186 DLSKTKITKLPAS-----TFV-YAGIEEVLLPVT-LKEIGSQAFLKTS-QLKTIEIPEN-VSTI---------------- 240 (401)
T ss_dssp ECTTSCCSEECTT-----TTT-TCCCSEEECCTT-CCEECTTTTTTCT-TCCCEECCTT-CCEE----------------
T ss_pred ecCCCcceEechh-----hEe-ecccCEEEeCCc-hheehhhHhhCCC-CCCEEecCCC-ccCc----------------
Confidence 7777777666654 244 356666666633 5556666666655 5555555542 3323
Q ss_pred ccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCC-----CCCC-CCCCCCcccEEEcc
Q 040702 236 SLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLT-----SIPS-TLWNLKDILHLNLS 309 (797)
Q Consensus 236 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-----~lp~-~~~~l~~L~~L~l~ 309 (797)
...+|.+ .+|+.+++ .|.++.+...+|.++++|+.+++.+|.+. .++. .|.++++|+.+++.
T Consensus 241 ----------~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 241 ----------GQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp ----------CTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC
T ss_pred ----------ccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC
Confidence 3333333 34444444 22334344444444444444444444433 2332 34445555555555
Q ss_pred CCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccc-cCCeeeecCCc
Q 040702 310 SNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLI-SLKSLNLSNNN 384 (797)
Q Consensus 310 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~ 384 (797)
+.++.+...+|.++++|+.++|..| ++.+.+.+|.++ +|+.+++++|.+....+..|.+++ +++.|++..+.
T Consensus 309 -~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 309 -ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp -TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred -CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 2344444455555555555555333 444445555555 555555555555544445555553 45555555544
No 377
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.75 E-value=3.6e-17 Score=178.89 Aligned_cols=264 Identities=11% Similarity=0.105 Sum_probs=165.1
Q ss_pred CCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEE
Q 040702 53 HNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELG 132 (797)
Q Consensus 53 ~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (797)
..++.+.+.+ +++.+.+.+|.+. +|+.+.|.+| ++ .|+..+|.+ .+|+.+.+.. .++.+.+.+|.++++|+.++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 4445554432 3445555555553 5666665544 44 555555544 3466666653 44545555566666666666
Q ss_pred ccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEcc
Q 040702 133 LQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMD 212 (797)
Q Consensus 133 L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~ 212 (797)
|++|+++.+...+|. .++|+.+.|..| ++.++.. .|.++++|+.+++..| ++.+...+|.+ . +|+.+.+
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~-----aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~-~L~~i~l- 255 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQ-----AFLKTSQLKTIEIPEN-VSTIGQEAFRE-S-GITTVKL- 255 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTT-----TTTTCTTCCCEECCTT-CCEECTTTTTT-C-CCSEEEE-
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhh-----HhhCCCCCCEEecCCC-ccCcccccccc-C-CccEEEe-
Confidence 666666655555555 355666666533 5555443 3555566666666543 44455555555 2 5666665
Q ss_pred CCcccccCChhhhhhhhhHhhhccccccccc-----CCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCC
Q 040702 213 NCNISGSIPEEINNLTNLILQLLSLEGNQLE-----GSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGS 287 (797)
Q Consensus 213 ~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 287 (797)
.+.++.+...+|.++++| +.+++.+|.+. .+.+.+|.++++|+.+++. +.++.+...+|.++++|+.++|..
T Consensus 256 p~~i~~I~~~aF~~c~~L--~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~ 332 (401)
T 4fdw_A 256 PNGVTNIASRAFYYCPEL--AEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPA 332 (401)
T ss_dssp ETTCCEECTTTTTTCTTC--CEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECT
T ss_pred CCCccEEChhHhhCCCCC--CEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECc
Confidence 334454555556666655 66666665554 4667788888888888888 457777788888888888888855
Q ss_pred CCCCCCCC-CCCCCCcccEEEccCCcCCCCCCccccccc-cccEEeccCcccc
Q 040702 288 NLLTSIPS-TLWNLKDILHLNLSSNFFTGPLPLKIGNLN-VLVQLDLSMNNFS 338 (797)
Q Consensus 288 N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~ 338 (797)
| ++.++. +|.++ +|+.+++++|.+....+..|.+++ .++.|++..+.+.
T Consensus 333 ~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 333 N-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp T-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred c-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 4 777755 56667 888888888888777777787774 6788888877765
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=8.3e-19 Score=171.99 Aligned_cols=129 Identities=28% Similarity=0.329 Sum_probs=71.0
Q ss_pred cEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCC--CCCCCcccEEEccCCcCCCCCCccccccccccEEeccC
Q 040702 257 FQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPST--LWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSM 334 (797)
Q Consensus 257 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~--~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 334 (797)
+.+++++|.++.+ |..+. .+|+.|++++|.++.++.. +..+++|+.|++++|.|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~i-p~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKEI-PRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSSC-CSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCcC-ccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 4556666666533 33222 2555566666666555442 44555555555555555555555555555555555555
Q ss_pred cccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCC
Q 040702 335 NNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGT 388 (797)
Q Consensus 335 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 388 (797)
|+|++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 555555555555555555555555555555555555555555555555555543
No 379
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=2e-17 Score=162.05 Aligned_cols=131 Identities=26% Similarity=0.297 Sum_probs=77.4
Q ss_pred CEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccC
Q 040702 56 EWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQK 135 (797)
Q Consensus 56 ~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 135 (797)
+++++++|+++. +|..+.. +|++|+|++|+|++..+...|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 344555555533 2333222 5555666666555222223455566666666666666666566666666666666666
Q ss_pred CcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCC
Q 040702 136 NSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGI 194 (797)
Q Consensus 136 N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 194 (797)
|+|+++.+.+|.++++|++|+|++|+|+.+.+. .|..+++|++|+|++|++.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPG-----SFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTT-----SSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHH-----HhhcCCCCCEEEeCCCCccCc
Confidence 666666666666666666666666666666554 356666677777777777654
No 380
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.71 E-value=7.6e-18 Score=173.32 Aligned_cols=133 Identities=20% Similarity=0.255 Sum_probs=101.8
Q ss_pred CCccccccccCCcceeec-----ceE--EEEEEEEeccCCc------------------------chhHHHHHHHhhhcc
Q 040702 514 FSENNLIGRGGFGPVYKD-----GME--VAIKVFNLQYGGA------------------------FKSFDIECGMMKRIR 562 (797)
Q Consensus 514 f~~~~~lg~G~~g~Vyk~-----~~~--vAvK~~~~~~~~~------------------------~~~~~~E~~~l~~l~ 562 (797)
|+..+.||+|+||.||++ |+. ||||+++...... ...+.+|+.++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999974 567 9999975431110 125788999999999
Q ss_pred CCce--eEeeeeeecCCeEEEEEEccCC-C----CHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCC
Q 040702 563 HRNL--IKIISSCSNDDFKALVLEYMPL-G----SLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLK 635 (797)
Q Consensus 563 Hpni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlk 635 (797)
|+++ +.++++ +..++||||+.+ | +|.+.... .++..+..++.|++.|+.|||. +.+|+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence 8864 344432 356899999942 3 77776433 2234567899999999999994 4689999999
Q ss_pred CCceEEcCCCcEEEEeecCCccC
Q 040702 636 PSNVLLDDNMVAHLSDFGMAKPL 658 (797)
Q Consensus 636 p~NIll~~~~~~kl~DFGla~~~ 658 (797)
|+|||++. .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999753
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=5.5e-17 Score=158.97 Aligned_cols=109 Identities=23% Similarity=0.304 Sum_probs=61.3
Q ss_pred CCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeec
Q 040702 78 TLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGL 157 (797)
Q Consensus 78 ~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L 157 (797)
+|++|+|++|+|+ .+| ..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++.+.+|.++++|++|+|
T Consensus 32 ~l~~L~L~~n~i~-~ip-~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TCCEEECCSSCCC-SCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCc-hhH-HHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 4555555555554 444 23345555555555555555555555555555555555555555555555666666666666
Q ss_pred cCccCcCCCCCccccccCCCCCCCcEEEccCCCCCC
Q 040702 158 NDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGG 193 (797)
Q Consensus 158 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 193 (797)
++|.|+.+++. .|..+++|+.|+|++|++.+
T Consensus 110 ~~N~l~~~~~~-----~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 110 HGNDISVVPEG-----AFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CSSCCCBCCTT-----TTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCeeChh-----hhhcCccccEEEeCCCCeec
Confidence 66666655553 25555666666666666553
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=2.7e-17 Score=157.53 Aligned_cols=137 Identities=22% Similarity=0.271 Sum_probs=69.1
Q ss_pred CCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCcccc
Q 040702 20 PSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADV 99 (797)
Q Consensus 20 l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~ 99 (797)
+++|++|+|++|+++. ..+|..+..+++|++|++++|+++++ ..|..+++|++|+|++|++++.+| ..+.
T Consensus 23 ~~~L~~L~l~~n~l~~-------~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~ 92 (168)
T 2ell_A 23 PAAVRELVLDNCKSND-------GKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLD-MLAE 92 (168)
T ss_dssp TTSCSEEECCSCBCBT-------TBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCC-HHHH
T ss_pred cccCCEEECCCCCCCh-------hhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHH-HHHh
Confidence 3555666666655320 12334445555555555555555544 445555555555555555552222 2233
Q ss_pred CCCCccEEEccCccccccCC-chhhCCCCCCEEEccCCcCcccCC---ccccCCCCCCeeeccCccCcCCC
Q 040702 100 RLPNLKELHLWGNNFIGTIP-SFIFNASKLSELGLQKNSFSGSIP---NTFGNLRNLKWLGLNDNYLTSST 166 (797)
Q Consensus 100 ~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~f~~l~~L~~L~L~~N~l~~~~ 166 (797)
.+++|++|+|++|++++..+ ..+..+++|++|+|++|+|+++.+ ..|..+++|++|++++|.+.+++
T Consensus 93 ~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 93 KLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp HCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred hCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 45555555555555553211 445555555555555555554443 34555555555555555555444
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=5e-17 Score=155.61 Aligned_cols=139 Identities=20% Similarity=0.155 Sum_probs=116.1
Q ss_pred CCCCCCEEEcccCccc-ccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCC
Q 040702 51 NLHNMEWMAFSFNKVV-GVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLS 129 (797)
Q Consensus 51 ~l~~L~~L~ls~N~i~-~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 129 (797)
..++|+.|++++|+++ +.+|..+..+++|++|+|++|.|+ .+ ..+..+++|++|+|++|++++.+|..+..+++|+
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~-~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCC-CC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCC-Ch--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 3478999999999998 567888899999999999999998 55 4567899999999999999877888888899999
Q ss_pred EEEccCCcCcccCC-ccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCC
Q 040702 130 ELGLQKNSFSGSIP-NTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGI 194 (797)
Q Consensus 130 ~L~L~~N~l~~~~~-~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 194 (797)
+|+|++|+|+++.. ..|.++++|++|+|++|.++..++.. ...+..+++|++|++++|.+..+
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~--~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYR--ESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHH--HHHHTTCSSCCEETTEETTSCBC
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHH--HHHHHhCccCcEecCCCCChhhc
Confidence 99999999997643 78999999999999999998887610 00267788899999999988744
No 384
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.69 E-value=1.7e-17 Score=160.24 Aligned_cols=148 Identities=20% Similarity=0.249 Sum_probs=106.5
Q ss_pred CCCCCCCCccccCCcCCCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCC-CCCCEEEcccCcccccCCccccCCCCC
Q 040702 1 MPSLTNDFLRGIILSQLGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNL-HNMEWMAFSFNKVVGVVPTTIFNVSTL 79 (797)
Q Consensus 1 ~~~l~~~~~~~~~~~~~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l-~~L~~L~ls~N~i~~~~p~~~~~l~~L 79 (797)
|+.|+.+.+.. .+++.++++|++|+|++|+++ .+|. +..+ ++|++|++++|+|+++ ..|.++++|
T Consensus 1 m~~lt~~~i~~--~~~~~~~~~L~~L~l~~n~l~---------~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L 66 (176)
T 1a9n_A 1 MVKLTAELIEQ--AAQYTNAVRDRELDLRGYKIP---------VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRL 66 (176)
T ss_dssp -CCCCHHHHHT--SCEEECTTSCEEEECTTSCCC---------SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSC
T ss_pred CccccHHHHHH--HHhcCCcCCceEEEeeCCCCc---------hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCC
Confidence 55666666654 345788889999999999854 3333 3333 3888888888888875 577888888
Q ss_pred CEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCc--hhhCCCCCCEEEccCCcCcccCCc---cccCCCCCCe
Q 040702 80 KSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPS--FIFNASKLSELGLQKNSFSGSIPN---TFGNLRNLKW 154 (797)
Q Consensus 80 ~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~---~f~~l~~L~~ 154 (797)
++|+|++|+|+ .+|...|..+++|++|+|++|+|+. +|. .+..+++|++|+|++|.++.+.+. .+..+++|++
T Consensus 67 ~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~ 144 (176)
T 1a9n_A 67 KTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRV 144 (176)
T ss_dssp CEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSE
T ss_pred CEEECCCCccc-ccCcchhhcCCCCCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccce
Confidence 88888888887 6776666778888888888888763 444 677777888888888887754333 4777777777
Q ss_pred eeccCccCcC
Q 040702 155 LGLNDNYLTS 164 (797)
Q Consensus 155 L~L~~N~l~~ 164 (797)
|++++|.+.+
T Consensus 145 Ld~~~n~~~~ 154 (176)
T 1a9n_A 145 LDFQKVKLKE 154 (176)
T ss_dssp ETTEECCHHH
T ss_pred eCCCcCCHHH
Confidence 7777776644
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.69 E-value=2e-16 Score=152.88 Aligned_cols=131 Identities=26% Similarity=0.269 Sum_probs=81.5
Q ss_pred CEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccC
Q 040702 56 EWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQK 135 (797)
Q Consensus 56 ~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 135 (797)
+.+++++|+++.+ |..+ .++|++|++++|+++ .++...|..+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 10 ~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 10 TEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCccC-CCCC--CCCCcEEEeCCCccc-EeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 4455555555542 2222 245666666666665 55555555666666666666666655555566666677777777
Q ss_pred CcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCC
Q 040702 136 NSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGIL 195 (797)
Q Consensus 136 N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 195 (797)
|+|+++.+..|.++++|++|+|++|.++.+++.. |..+++|++|++++|++.+..
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-----~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGI-----FDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT-----TTTCTTCCEEECCSSCBCCCH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHH-----hcCCcccCEEEecCCCeeccC
Confidence 7776666666677777777777777777666542 566677777777777776543
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=1.1e-16 Score=156.70 Aligned_cols=129 Identities=27% Similarity=0.370 Sum_probs=99.6
Q ss_pred cccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCcc
Q 040702 281 RKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNR 360 (797)
Q Consensus 281 ~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 360 (797)
+.+++++|.++.+|..+. ++|+.|++++|.|+ .+|..|..+++|+.|+|++|.|+++.+..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 456777777777776553 57778888888877 455677778888888888888887777778888888888888888
Q ss_pred ccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCccc
Q 040702 361 LQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGE 412 (797)
Q Consensus 361 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 412 (797)
|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++|++.|.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 8877777788888888888888888876666788888888888887777653
No 387
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.68 E-value=6.1e-16 Score=169.72 Aligned_cols=319 Identities=11% Similarity=0.063 Sum_probs=214.4
Q ss_pred cccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCC
Q 040702 64 KVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIP 143 (797)
Q Consensus 64 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 143 (797)
+++.+...+|.++++|+.+.|.. .++ .|+..+|.++++|+.++|..+ ++.+...+|.++++|+.+.+..+ +..+..
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~-~i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~ 133 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS-TVR-EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGV 133 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT-TCC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECT
T ss_pred eEeEhHHHHhhCCCCceEEEeCC-Ccc-CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecc
Confidence 45666677777777777777764 366 677777777777777777654 55566667777777777766654 445666
Q ss_pred ccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChh
Q 040702 144 NTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEE 223 (797)
Q Consensus 144 ~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~ 223 (797)
.+|.+...++....... ..+... .|.++++|+.+.+.++ +..+...+|.++. +|+.+.+..+ +.......
T Consensus 134 ~aF~~~~~~~~~~~~~~--~~i~~~-----aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~-~L~~i~l~~~-~~~I~~~~ 203 (394)
T 4fs7_A 134 EAFKGCDFKEITIPEGV--TVIGDE-----AFATCESLEYVSLPDS-METLHNGLFSGCG-KLKSIKLPRN-LKIIRDYC 203 (394)
T ss_dssp TTTTTCCCSEEECCTTC--CEECTT-----TTTTCTTCCEEECCTT-CCEECTTTTTTCT-TCCBCCCCTT-CCEECTTT
T ss_pred eeeecccccccccCccc--cccchh-----hhcccCCCcEEecCCc-cceeccccccCCC-CceEEEcCCC-ceEeCchh
Confidence 77777654444333222 222222 4777777777777654 3446666676665 6777777655 44455566
Q ss_pred hhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcc
Q 040702 224 INNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDI 303 (797)
Q Consensus 224 ~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L 303 (797)
|.+...| +.+.+..+... +.+.+....+|+.+.+..+ ++.+...+|.++..|+.+.+..+...--...+..+..+
T Consensus 204 F~~~~~L--~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l 278 (394)
T 4fs7_A 204 FAECILL--ENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGL 278 (394)
T ss_dssp TTTCTTC--CBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTC
T ss_pred hcccccc--ceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcceeecccccccccc
Confidence 6666666 66666555433 2233444567888877643 44466677888888888888776543333466677788
Q ss_pred cEEEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCC
Q 040702 304 LHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNN 383 (797)
Q Consensus 304 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 383 (797)
+.+....+.+. ...|..+.+|+.+.+..+ ++.+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+++..|
T Consensus 279 ~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 279 KKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred ceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 87777666543 346777888888888755 66567778888888888888654 66566778888888888888776
Q ss_pred cCCCCCChhhhccCCCCeEEccCC
Q 040702 384 NLSGTIPISLEKLLDLKDINVSFN 407 (797)
Q Consensus 384 ~l~~~~p~~~~~l~~L~~L~l~~N 407 (797)
++.+-..+|.++.+|+.+++..+
T Consensus 354 -l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 354 -LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp -CCEECTTTBTTCTTCCEEEEEGG
T ss_pred -ccEehHHHhhCCCCCCEEEECCC
Confidence 76677778888888888888654
No 388
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.68 E-value=1e-15 Score=167.88 Aligned_cols=327 Identities=14% Similarity=0.102 Sum_probs=184.6
Q ss_pred ccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCC
Q 040702 49 IDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKL 128 (797)
Q Consensus 49 ~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 128 (797)
|.++.+|+.+.+.. .++.+...+|.++++|+.++|..+ ++ .++..+|.++++|+.+.+..+ +..+...+|.+...+
T Consensus 67 F~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 67 FQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCS
T ss_pred hhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ce-EccchhhcccccchhhcccCc-eeeecceeeeccccc
Confidence 44455555555542 244444455555555555555433 33 445555555555555444432 333333444443322
Q ss_pred CEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcE
Q 040702 129 SELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMED 208 (797)
Q Consensus 129 ~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~ 208 (797)
+.... +.+..+...+|.++++|+.+.+.++ +..+... .|.++.+|+.+++..| +..+...+|.+.. .|+.
T Consensus 143 ~~~~~--~~~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~-----~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~-~L~~ 212 (394)
T 4fs7_A 143 EITIP--EGVTVIGDEAFATCESLEYVSLPDS-METLHNG-----LFSGCGKLKSIKLPRN-LKIIRDYCFAECI-LLEN 212 (394)
T ss_dssp EEECC--TTCCEECTTTTTTCTTCCEEECCTT-CCEECTT-----TTTTCTTCCBCCCCTT-CCEECTTTTTTCT-TCCB
T ss_pred ccccC--ccccccchhhhcccCCCcEEecCCc-cceeccc-----cccCCCCceEEEcCCC-ceEeCchhhcccc-ccce
Confidence 22211 1122233444555555555554433 2223322 2444444554444443 3334444444443 4444
Q ss_pred EEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCC
Q 040702 209 FWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSN 288 (797)
Q Consensus 209 L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 288 (797)
+.+.++... +.+.+....+| +.+.+.. .++.+...+|.....++.+.+..+... +....|..+..++.+....+
T Consensus 213 i~~~~~~~~--i~~~~~~~~~l--~~i~ip~-~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~ 286 (394)
T 4fs7_A 213 MEFPNSLYY--LGDFALSKTGV--KNIIIPD-SFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSV 286 (394)
T ss_dssp CCCCTTCCE--ECTTTTTTCCC--CEEEECT-TCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSS
T ss_pred eecCCCceE--eehhhcccCCC--ceEEECC-CceecccccccccccceeEEcCCCcce-eeccccccccccceeccCce
Confidence 444333221 11111111222 4444432 233355667778888888888777543 66778888888888877766
Q ss_pred CCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChh
Q 040702 289 LLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNS 368 (797)
Q Consensus 289 ~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 368 (797)
.+.. ..+..+.+|+.+.+..+ ++.+...+|.++.+|+.+++..+ ++.+...+|.++.+|+.+.+..| ++.....+
T Consensus 287 ~i~~--~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~a 361 (394)
T 4fs7_A 287 IVPE--KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANA 361 (394)
T ss_dssp EECT--TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred eecc--ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHH
Confidence 4321 25667888888888765 66566778888899999998754 77677888999999999999877 76677788
Q ss_pred hhccccCCeeeecCCcCCCCCChhhhccCCCCeE
Q 040702 369 IGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDI 402 (797)
Q Consensus 369 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 402 (797)
|.++.+|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 362 F~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 362 FQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp BTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred hhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 999999999998765 33 335667777777654
No 389
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=2.9e-16 Score=151.64 Aligned_cols=133 Identities=26% Similarity=0.274 Sum_probs=101.0
Q ss_pred ccccccCCCCCCCCCCCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCc
Q 040702 280 LRKLYLGSNLLTSIPSTLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYN 359 (797)
Q Consensus 280 L~~L~L~~N~l~~lp~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 359 (797)
.+.+++++|.++.+|..+. ++|+.|++++|.+++..+..|..+++|++|++++|.+++..+..|.++++|++|+|++|
T Consensus 9 ~~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TTEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4566777777777775443 57777788888777666666777788888888888887776677778888888888888
Q ss_pred cccCCCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcCcccCC
Q 040702 360 RLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRLEGEIP 414 (797)
Q Consensus 360 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 414 (797)
++++..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|++.+.+|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8887666677788888888888888886666667778888888888888776654
No 390
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.6e-16 Score=148.70 Aligned_cols=128 Identities=23% Similarity=0.315 Sum_probs=63.0
Q ss_pred CCCCCEEeCCCCCCC-CcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccc
Q 040702 20 PSSLQTLYLSYNPPS-GSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSAD 98 (797)
Q Consensus 20 l~~L~~LdLs~N~~~-~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~ 98 (797)
+++|++|++++|.++ + .+|..+..+++|++|++++|+++++ ..|.++++|++|+|++|.+++.+|. .+
T Consensus 16 ~~~l~~L~l~~n~l~~~--------~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~-~~ 84 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEG--------KLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEV-LA 84 (149)
T ss_dssp GGGCSEEECTTCBCBTT--------BCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHH-HH
T ss_pred CccCeEEEccCCcCChh--------HHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHH-Hh
Confidence 355555666655533 1 2333444555555555555555544 4455555555555555555522332 22
Q ss_pred cCCCCccEEEccCcccccc-CCchhhCCCCCCEEEccCCcCcccCC---ccccCCCCCCeeecc
Q 040702 99 VRLPNLKELHLWGNNFIGT-IPSFIFNASKLSELGLQKNSFSGSIP---NTFGNLRNLKWLGLN 158 (797)
Q Consensus 99 ~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~f~~l~~L~~L~L~ 158 (797)
..+++|++|+|++|++++. .+..+..+++|++|++++|+++++.+ ..|..+++|++|+++
T Consensus 85 ~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 85 EKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp HHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred hhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 3355555555555555432 22444555555555555555554443 345555555555543
No 391
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.3e-16 Score=149.32 Aligned_cols=132 Identities=18% Similarity=0.159 Sum_probs=102.9
Q ss_pred CCCCCEEEcccCccc-ccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCE
Q 040702 52 LHNMEWMAFSFNKVV-GVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSE 130 (797)
Q Consensus 52 l~~L~~L~ls~N~i~-~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 130 (797)
.++|+.|++++|+++ +.+|..+..+++|+.|+|++|.++ .+ ..+..+++|++|+|++|.+++.+|..+..+++|++
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~-~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCC-CC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCC-Cc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 467889999999988 667888888999999999999988 44 45567888999999999888767777778888888
Q ss_pred EEccCCcCcccC-CccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccC
Q 040702 131 LGLQKNSFSGSI-PNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSN 188 (797)
Q Consensus 131 L~L~~N~l~~~~-~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~ 188 (797)
|+|++|+|+++. +..|.++++|++|++++|.++..++.. ...+..+++|+.|++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYR--ENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHH--HHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHH--HHHHHHCCCcccccCCC
Confidence 888888888753 477888888888888888888776510 00256667777777763
No 392
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=1.3e-16 Score=170.24 Aligned_cols=133 Identities=15% Similarity=0.167 Sum_probs=92.9
Q ss_pred CCCccccccccCCcceeec----ceEEEEEEEEeccCC--------------cchhH--------HHHHHHhhhccCCce
Q 040702 513 RFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGG--------------AFKSF--------DIECGMMKRIRHRNL 566 (797)
Q Consensus 513 ~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~--------------~~~~~--------~~E~~~l~~l~Hpni 566 (797)
-|.+.+.||+|+||.||++ |+.||||+++..... ..... .+|...+.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3889999999999999985 689999998643100 01112 234455555544333
Q ss_pred eEeeeeeecCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCC-
Q 040702 567 IKIISSCSNDDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNM- 645 (797)
Q Consensus 567 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~- 645 (797)
....-+.. ...++||||++|+++.++.. ......++.|++.|+.||| ..|||||||||.|||+++++
T Consensus 176 ~vp~p~~~--~~~~LVME~i~G~~L~~l~~-------~~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 176 PVPEPIAQ--SRHTIVMSLVDALPMRQVSS-------VPDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp SCCCEEEE--ETTEEEEECCSCEEGGGCCC-------CSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEEC
T ss_pred CCCeeeec--cCceEEEEecCCccHhhhcc-------cHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCC
Confidence 21111111 12379999999988765421 1234578899999999999 89999999999999998776
Q ss_pred ---------cEEEEeecCCcc
Q 040702 646 ---------VAHLSDFGMAKP 657 (797)
Q Consensus 646 ---------~~kl~DFGla~~ 657 (797)
.+.|+||+-+-.
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEE
T ss_pred cccccccccceEEEEeCCccc
Confidence 389999997753
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=1.3e-15 Score=147.03 Aligned_cols=136 Identities=17% Similarity=0.143 Sum_probs=67.1
Q ss_pred ccCCCCCCEEEcccCcccccCCccccCC-CCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCC
Q 040702 49 IDNLHNMEWMAFSFNKVVGVVPTTIFNV-STLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASK 127 (797)
Q Consensus 49 ~~~l~~L~~L~ls~N~i~~~~p~~~~~l-~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 127 (797)
+.++.+|+.|++++|+++.+ |. +..+ ++|++|+|++|.|+ .+ ..+..+++|++|+|++|+|++..+..|..+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~-~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIR-KL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCC-EE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCC-cc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 34455566666666666543 33 3333 25666666666655 33 23345555555555555555444444455555
Q ss_pred CCEEEccCCcCcccCC-ccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCC
Q 040702 128 LSELGLQKNSFSGSIP-NTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPL 191 (797)
Q Consensus 128 L~~L~L~~N~l~~~~~-~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 191 (797)
|++|+|++|+|+.+.+ ..|.++++|++|+|++|.++..+... ...+..+++|+.||+++|.+
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~--~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYR--LYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHH--HHHHHHCTTCSEETTEECCH
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcHhHH--HHHHHHCCccceeCCCcCCH
Confidence 5555555555543322 24555555555555555555443310 00133344455555554443
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=3.1e-17 Score=161.70 Aligned_cols=167 Identities=17% Similarity=0.174 Sum_probs=138.8
Q ss_pred CCCCCCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCc
Q 040702 17 LGNPSSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSS 96 (797)
Q Consensus 17 ~~~l~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~ 96 (797)
+....+++.++|+.|.++|.+|. ++.+|..+..+++|++|++++|++++ +| .+.++++|+.|+|++|.|+ .+|..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~--l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~ 88 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPP--IEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENL 88 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTT--CCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSH
T ss_pred HHhcccccCcchheeEeccccCc--HhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccch
Confidence 45667889999999999988876 77888899999999999999999998 56 8999999999999999998 88864
Q ss_pred cccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCC-ccccCCCCCCeeeccCccCcCCCCCc-----c
Q 040702 97 ADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIP-NTFGNLRNLKWLGLNDNYLTSSTPEL-----S 170 (797)
Q Consensus 97 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~f~~l~~L~~L~L~~N~l~~~~~~~-----~ 170 (797)
. ..+++|++|+|++|++++. | .+..+++|++|+|++|+|+.+.+ ..|.++++|++|++++|.++..++.- .
T Consensus 89 ~-~~~~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 165 (198)
T 1ds9_A 89 D-AVADTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEY 165 (198)
T ss_dssp H-HHHHHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHH
T ss_pred h-hcCCcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHH
Confidence 4 4678999999999999864 4 68899999999999999997654 67999999999999999997764320 0
Q ss_pred ccccCCCCCCCcEEEccCCCCCC
Q 040702 171 SLSSLSNCKYLEYFSFSNNPLGG 193 (797)
Q Consensus 171 ~~~~l~~l~~L~~L~Ls~N~l~~ 193 (797)
....+..+++|+.|| +|.++.
T Consensus 166 ~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 166 RIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHHHHHCSSCSEEC--CGGGTT
T ss_pred HHHHHHhCCCcEEEC--CcccCH
Confidence 001256788899887 677664
No 395
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.54 E-value=1.1e-13 Score=151.72 Aligned_cols=327 Identities=10% Similarity=0.109 Sum_probs=154.6
Q ss_pred ccCCC-CCCEEEcccCcccccCCccccCCCCCCEEEccCCc---CcccCCCccccCCCCccEEEccCccccccCCchhhC
Q 040702 49 IDNLH-NMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNS---LSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFN 124 (797)
Q Consensus 49 ~~~l~-~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~---l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 124 (797)
|.++. .|+.+.+-. .++.+...+|.++++|+.+.++.|. ++ .|+..+|.++.+|+.+.+..+ ++.+...+|.+
T Consensus 59 F~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~-~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 59 FCNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVK-KIGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp TTTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCC-EECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred ccCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeee-EechhhchhcccceeeccCCc-cceehhhhhhh
Confidence 44442 355555543 2555555566666666666655542 44 555555555556665555443 34344455555
Q ss_pred CCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhcccc
Q 040702 125 ASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQ 204 (797)
Q Consensus 125 l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 204 (797)
+.+|+.+.+..+ +..+...+|.++.+|+.+.+..+ ++.+... .|.+ .+|+.+.+..+- ..+...+|.+..
T Consensus 136 c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~-----aF~~-~~l~~i~ip~~~-~~i~~~af~~c~- 205 (394)
T 4gt6_A 136 CEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEER-----AFTG-TALTQIHIPAKV-TRIGTNAFSECF- 205 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTT-----TTTT-CCCSEEEECTTC-CEECTTTTTTCT-
T ss_pred hcccccccccce-eeeecccceecccccccccccce-eeEeccc-----cccc-cceeEEEECCcc-cccccchhhhcc-
Confidence 666666666533 33355555666666666555443 3333332 2332 345555554332 223344444443
Q ss_pred CCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccc
Q 040702 205 SMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLY 284 (797)
Q Consensus 205 ~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 284 (797)
++.......+.........+ ..+.........+.....+..+.+. +.+..+...+|.++..|+.+.
T Consensus 206 ~l~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~ 271 (394)
T 4gt6_A 206 ALSTITSDSESYPAIDNVLY-------------EKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVK 271 (394)
T ss_dssp TCCEEEECCSSSCBSSSCEE-------------EECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEE
T ss_pred ccceecccccccccccceee-------------cccccccccccccccccccceEEcC-CcceEcccceeeecccccEEe
Confidence 34443333322221000000 0000000000001112223333332 223344455666666666666
Q ss_pred cCCCCCCCCC-CCCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccC
Q 040702 285 LGSNLLTSIP-STLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQG 363 (797)
Q Consensus 285 L~~N~l~~lp-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 363 (797)
+..+.. .+. .+|.++++|+.+.+. +.++.+....|.++.+|+.+++..+ ++.+...+|.++.+|+.+.+..+ ++.
T Consensus 272 lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~ 347 (394)
T 4gt6_A 272 MPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTK 347 (394)
T ss_dssp CCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCB
T ss_pred cccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCE
Confidence 654433 233 245556666666664 3344455556666666666666543 44455566666667776666543 554
Q ss_pred CCChhhhccccCCeeeecCCcCCCCCChhhhccCCCCeEEccCCcC
Q 040702 364 SIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKDINVSFNRL 409 (797)
Q Consensus 364 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 409 (797)
+...+|.++.+|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 348 I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 348 IPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred EhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 555666666677777666664331 3445556666666655543
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=2e-14 Score=137.53 Aligned_cols=105 Identities=22% Similarity=0.246 Sum_probs=58.9
Q ss_pred CCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCC
Q 040702 23 LQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLP 102 (797)
Q Consensus 23 L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 102 (797)
.++||+++|. ++++|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+ .+|...|..++
T Consensus 11 ~~~l~~s~n~---------l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~ 78 (170)
T 3g39_A 11 GTTVDCSGKS---------LASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLT 78 (170)
T ss_dssp TTEEECTTSC---------CSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCT
T ss_pred CCEEEeCCCC---------cCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcC-ccChhhccCCC
Confidence 4566666666 333444442 45666666666666665666666666666666666665 55555555555
Q ss_pred CccEEEccCccccccCCchhhCCCCCCEEEccCCcCc
Q 040702 103 NLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFS 139 (797)
Q Consensus 103 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (797)
+|++|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 79 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 79 QLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 5555555555555444444555555555555555544
No 397
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=9.8e-17 Score=158.06 Aligned_cols=128 Identities=29% Similarity=0.293 Sum_probs=76.4
Q ss_pred hhcccccccccCCCch------hhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCCCCCCCCcccEE
Q 040702 233 QLLSLEGNQLEGSIPD------DLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPSTLWNLKDILHL 306 (797)
Q Consensus 233 ~~L~Ls~N~l~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L 306 (797)
+.++++.+.+.+..|. .|..+++|++|+|++|++++ +| .+..+++|+.|++++|.++.+|..+..+++|+.|
T Consensus 21 ~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L 98 (198)
T 1ds9_A 21 VATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEEL 98 (198)
T ss_dssp CCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEE
T ss_pred cCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEE
Confidence 5666666666665554 66667777777777777765 33 6666666777777766666666555455666666
Q ss_pred EccCCcCCCCCCccccccccccEEeccCcccccccC-ccccCCcccceecccCccccCC
Q 040702 307 NLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIP-TKIGGLKDLQYLFLEYNRLQGS 364 (797)
Q Consensus 307 ~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~ 364 (797)
++++|.+++ +| .+..+++|+.|++++|+++...+ ..+..+++|++|++++|++.+.
T Consensus 99 ~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 99 WISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp EEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred ECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 666666654 22 35555566666666665554322 3455555555555555555443
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=3e-14 Score=136.37 Aligned_cols=107 Identities=25% Similarity=0.306 Sum_probs=81.7
Q ss_pred CCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeecc
Q 040702 79 LKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLN 158 (797)
Q Consensus 79 L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~ 158 (797)
.+.|++++|.|+ .+|..++ ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.++.|.++++|++|+|+
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~---~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP---TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC---CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 467777777776 6776553 677888888888877777778888888888888888887777778888888888888
Q ss_pred CccCcCCCCCccccccCCCCCCCcEEEccCCCCCCC
Q 040702 159 DNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGI 194 (797)
Q Consensus 159 ~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 194 (797)
+|+|+.+++. .|..+++|++|+|++|++.+.
T Consensus 87 ~N~l~~~~~~-----~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 87 DNQLKSIPRG-----AFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SSCCCCCCTT-----TTTTCTTCCEEECCSSCBCTT
T ss_pred CCccCEeCHH-----HhcCCCCCCEEEeCCCCCCCC
Confidence 8888877765 367777788888888877654
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.53 E-value=3.9e-14 Score=135.99 Aligned_cols=104 Identities=20% Similarity=0.295 Sum_probs=56.5
Q ss_pred CEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCC
Q 040702 24 QTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPN 103 (797)
Q Consensus 24 ~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 103 (797)
+.+|+++|+ ++++|..+. ++|++|+|++|+|+++.|..|.++++|+.|+|++|+|+ .+|...|..+++
T Consensus 15 ~~l~~~~n~---------l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~ 82 (174)
T 2r9u_A 15 TLVNCQNIR---------LASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQ 82 (174)
T ss_dssp SEEECCSSC---------CSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTT
T ss_pred cEEEeCCCC---------CCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCC-ccChhHhCCcch
Confidence 566666666 233444443 45666666666666655666666666666666666665 455555545555
Q ss_pred ccEEEccCccccccCCchhhCCCCCCEEEccCCcCc
Q 040702 104 LKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFS 139 (797)
Q Consensus 104 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (797)
|++|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 83 L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 83 LTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred hhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555555555555433334444444444444444444
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.52 E-value=2.4e-13 Score=148.98 Aligned_cols=333 Identities=12% Similarity=0.108 Sum_probs=234.6
Q ss_pred cccCCcCCCCC-CCCCEEeCCCCCCCCcCCCccccCCC-ccccCCCCCCEEEcccCc---ccccCCccccCCCCCCEEEc
Q 040702 10 RGIILSQLGNP-SSLQTLYLSYNPPSGSIPSFILCEIP-HEIDNLHNMEWMAFSFNK---VVGVVPTTIFNVSTLKSLYL 84 (797)
Q Consensus 10 ~~~~~~~~~~l-~~L~~LdLs~N~~~~~~p~~~l~~ip-~~~~~l~~L~~L~ls~N~---i~~~~p~~~~~l~~L~~L~L 84 (797)
+.+-..+|.+. .+|+...+-.+ ++.|. .+|.++++|+.+.++.|. ++.+...+|.+..+|+.+.+
T Consensus 52 t~Ig~~aF~~~~~~L~sI~iP~s----------vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~ 121 (394)
T 4gt6_A 52 SKIGDRVFCNYKYVLTSVQIPDT----------VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPI 121 (394)
T ss_dssp EEECTTTTTTCCSCCCEEEECTT----------CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGG
T ss_pred eEcCHhhccCCCCcCEEEEECCC----------eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeecc
Confidence 34455678777 45888887543 34454 468999999999998874 88888899999999999988
Q ss_pred cCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCccCcC
Q 040702 85 HSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTS 164 (797)
Q Consensus 85 s~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~ 164 (797)
..+ ++ .++..+|..+.+|+.+.+..+ +..+...+|.+..+|+.+.+..+ ++.+...+|.+ .+|+.+.+..+.. .
T Consensus 122 ~~~-~~-~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~-~ 195 (394)
T 4gt6_A 122 LDS-VT-EIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVT-R 195 (394)
T ss_dssp GTT-CS-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCC-E
T ss_pred CCc-cc-eehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCccc-c
Confidence 765 65 789999999999999999755 55577889999999999999876 66688899976 6899999876643 3
Q ss_pred CCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhhHhhhcccccccccC
Q 040702 165 STPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEG 244 (797)
Q Consensus 165 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~ 244 (797)
+... .|.++..|+......+.........+.... ......... + ....+ ..+.+. +.++.
T Consensus 196 i~~~-----af~~c~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~----~~~~~--~~~~ip-~~v~~ 255 (394)
T 4gt6_A 196 IGTN-----AFSECFALSTITSDSESYPAIDNVLYEKSA-NGDYALIRY-------P----SQRED--PAFKIP-NGVAR 255 (394)
T ss_dssp ECTT-----TTTTCTTCCEEEECCSSSCBSSSCEEEECT-TSCEEEEEC-------C----TTCCC--SEEECC-TTEEE
T ss_pred cccc-----hhhhccccceecccccccccccceeecccc-ccccccccc-------c----ccccc--ceEEcC-CcceE
Confidence 3332 488889999988887766533222222111 111000000 0 00000 122222 33444
Q ss_pred CCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCC-CCCCCCcccEEEccCCcCCCCCCccccc
Q 040702 245 SIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPS-TLWNLKDILHLNLSSNFFTGPLPLKIGN 323 (797)
Q Consensus 245 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 323 (797)
+...+|.++..|+.+.+..+.. .+...+|.++++|+.+.+. +.++.++. +|.++.+|+.+.+..+ ++.+...+|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 5667888899999999876654 4677889999999999986 56777876 6667899999999865 66566788999
Q ss_pred cccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcC
Q 040702 324 LNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNL 385 (797)
Q Consensus 324 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 385 (797)
+.+|+.+.+..+ ++.+...+|.++.+|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 333 C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 333 CEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 999999999754 766778899999999999999886542 4677778888888877655
No 401
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.52 E-value=5.5e-14 Score=134.99 Aligned_cols=106 Identities=24% Similarity=0.273 Sum_probs=78.7
Q ss_pred CEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccC
Q 040702 80 KSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLND 159 (797)
Q Consensus 80 ~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~ 159 (797)
+.+++++|+++ .+|..++ ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP---TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC---CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 56777777776 6776553 6777777777777777777777777888888888888777777777788888888888
Q ss_pred ccCcCCCCCccccccCCCCCCCcEEEccCCCCCCC
Q 040702 160 NYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGI 194 (797)
Q Consensus 160 N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 194 (797)
|+|+.+++. .|..+++|+.|+|++|++...
T Consensus 91 N~l~~l~~~-----~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRG-----AFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTT-----TTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHH-----HhccccCCCEEEeCCCCcccc
Confidence 887777764 266777777777777777643
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.38 E-value=8.2e-15 Score=158.57 Aligned_cols=164 Identities=16% Similarity=0.112 Sum_probs=86.3
Q ss_pred CCCCEEEcccCcccccCCccccCC-----CCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhh----
Q 040702 53 HNMEWMAFSFNKVVGVVPTTIFNV-----STLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIF---- 123 (797)
Q Consensus 53 ~~L~~L~ls~N~i~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---- 123 (797)
+.|+.|+|++|+++......+... ++|++|+|++|.|+..-...+...+++|++|+|++|.|++.....+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456677777777665433333322 56777777777665221222223345677777777776544333332
Q ss_pred -CCCCCCEEEccCCcCccc----CCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChh
Q 040702 124 -NASKLSELGLQKNSFSGS----IPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRA 198 (797)
Q Consensus 124 -~l~~L~~L~L~~N~l~~~----~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~ 198 (797)
..++|++|+|++|.|+.. .+.++..+++|++|+|++|.|+...... -...+...++|+.|+|++|.|+......
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~-L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLEL-LAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHH-HHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHH-HHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 345677777777766542 2333455666777777777665432100 0012344556666666666665432222
Q ss_pred ----hhccccCCcEEEccCCcccc
Q 040702 199 ----IGNLSQSMEDFWMDNCNISG 218 (797)
Q Consensus 199 ----~~~l~~~L~~L~L~~n~i~~ 218 (797)
+...+ +|++|+|++|.|+.
T Consensus 231 l~~~L~~~~-~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 231 LARAAREHP-SLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHCS-SCCEEECTTSSCCH
T ss_pred HHHHHHhCC-CCCEEeccCCCCCH
Confidence 22233 45555555555543
No 403
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.37 E-value=3.7e-11 Score=130.89 Aligned_cols=313 Identities=11% Similarity=0.055 Sum_probs=153.6
Q ss_pred cccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCC
Q 040702 48 EIDNLHNMEWMAFSFNKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASK 127 (797)
Q Consensus 48 ~~~~l~~L~~L~ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 127 (797)
++....+|+.+.+. ..++.+...+|.++.+|+.++|..+ ++ .|+..+|.+. +|+.+.+..+ ++.+...+|.+ .+
T Consensus 41 ~~~~~~~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~~-v~-~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~ 114 (379)
T 4h09_A 41 WYKDRDRISEVRVN-SGITSIGEANFNSCYNMTKVTVAST-VT-SIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TD 114 (379)
T ss_dssp TGGGGGGCSEEEEC-TTEEEECTTTTTTCTTCCEEEECTT-CC-EECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CC
T ss_pred ccccccCCEEEEeC-CCccChHHHHhhCCCCCCEEEeCCc-ce-EechhhhcCC-CCceEECCce-eeEeccceecc-CC
Confidence 34455667777665 3466667777777777777777643 65 6777777665 5666666543 45444555544 36
Q ss_pred CCEEEccCCcCcccCCccccCCCCCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCc
Q 040702 128 LSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSME 207 (797)
Q Consensus 128 L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~ 207 (797)
|+.+.+..+ +..+...+|.+. +|+...+..+ ++.+... .|..+..++...+..+.........+. ......
T Consensus 115 L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~-----~f~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~ 185 (379)
T 4h09_A 115 LDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDG-----IGYKAENLEKIEVSSNNKNYVAENYVL-YNKNKT 185 (379)
T ss_dssp CSEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSC-----TTTTCTTCCEEEECTTCSSEEEETTEE-EETTSS
T ss_pred cccccCCCc-cccccccccccc-eeeeeeccce-eeccccc-----hhcccccccccccccccceeeccccee-cccccc
Confidence 777777655 333566666654 4555544433 3333332 356666666666655443311111000 000000
Q ss_pred EEEccCCcccccCChhhhhhhhhHhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCC
Q 040702 208 DFWMDNCNISGSIPEEINNLTNLILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGS 287 (797)
Q Consensus 208 ~L~L~~n~i~~~~p~~~~~l~~L~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 287 (797)
....+.....+ ..+.+.. ....+...++....+|+.+.+..+ +..+...+|.++..|+.+.+..
T Consensus 186 ------------~~~~~~~~~~~--~~~~~~~-~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~ 249 (379)
T 4h09_A 186 ------------ILESYPAAKTG--TEFTIPS-TVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPK 249 (379)
T ss_dssp ------------EEEECCTTCCC--SEEECCT-TCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECT
T ss_pred ------------eeccccccccc--ccccccc-ceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCC
Confidence 00000000000 1111111 111123344445555555555433 3334445555555565555554
Q ss_pred CCCCCCCC-CCCCCCcccEEEccCCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCC
Q 040702 288 NLLTSIPS-TLWNLKDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIP 366 (797)
Q Consensus 288 N~l~~lp~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 366 (797)
+ ++.+.. .+.++.+|+.+.+..+ +.......|.++.+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+..
T Consensus 250 ~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~ 326 (379)
T 4h09_A 250 N-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQV 326 (379)
T ss_dssp T-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECT
T ss_pred C-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHH
Confidence 4 444433 3444555555555433 33334445555555555555555555455555555555555555433 443444
Q ss_pred hhhhccccCCeeeecCCcCCCCCChhhhc
Q 040702 367 NSIGDLISLKSLNLSNNNLSGTIPISLEK 395 (797)
Q Consensus 367 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 395 (797)
.+|.++.+|+.+.+..+ ++.+-..+|.+
T Consensus 327 ~aF~~C~~L~~i~ip~~-v~~I~~~aF~~ 354 (379)
T 4h09_A 327 YAFKNCKALSTISYPKS-ITLIESGAFEG 354 (379)
T ss_dssp TTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred HHhhCCCCCCEEEECCc-cCEEchhHhhC
Confidence 45555555555555433 33333344443
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=1.7e-12 Score=139.66 Aligned_cols=132 Identities=19% Similarity=0.143 Sum_probs=85.8
Q ss_pred ccccCCC-CCCCCCCCCCCCCcccEEEccC-CcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCc
Q 040702 282 KLYLGSN-LLTSIPSTLWNLKDILHLNLSS-NFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYN 359 (797)
Q Consensus 282 ~L~L~~N-~l~~lp~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 359 (797)
.++++++ .|+.+|. +..+++|+.|+|++ |.|++..+..|.++++|+.|+|++|+|+++.|..|.++++|+.|+|++|
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 4566666 6777777 66677777777775 7777666667777777777777777777777777777777777777777
Q ss_pred cccCCCChhhhccccCCeeeecCCcCCCCCC-hhhhccCCCCeEEccCCcCcccCCC
Q 040702 360 RLQGSIPNSIGDLISLKSLNLSNNNLSGTIP-ISLEKLLDLKDINVSFNRLEGEIPR 415 (797)
Q Consensus 360 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~ 415 (797)
+|++..+..|..++ |+.|+|++|.+...-. .+|..+.......+..+.++|.-|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 77765555555555 7777777777764322 2343333333334445566665554
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=2.3e-12 Score=138.60 Aligned_cols=94 Identities=18% Similarity=0.142 Sum_probs=51.9
Q ss_pred cCCCccccCCCCCCEEEccc-CcccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCch
Q 040702 43 CEIPHEIDNLHNMEWMAFSF-NKVVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSF 121 (797)
Q Consensus 43 ~~ip~~~~~l~~L~~L~ls~-N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 121 (797)
+.||. +..+++|+.|+|++ |+|.++.|..|.++++|+.|+|++|+|+ .++...|..+++|++|+|++|+|+++.+..
T Consensus 22 ~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 99 (347)
T 2ifg_A 22 DSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRLSRLNLSFNALESLSWKT 99 (347)
T ss_dssp TTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCC-EECTTGGGSCSCCCEEECCSSCCSCCCSTT
T ss_pred CccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccc-eeCHHHhcCCcCCCEEeCCCCccceeCHHH
Confidence 34455 55555666666653 6666555555666666666666666665 444444555555555555555555444444
Q ss_pred hhCCCCCCEEEccCCcCc
Q 040702 122 IFNASKLSELGLQKNSFS 139 (797)
Q Consensus 122 ~~~l~~L~~L~L~~N~l~ 139 (797)
|..++ |+.|+|++|.|.
T Consensus 100 ~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 100 VQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp TCSCC-CCEEECCSSCCC
T ss_pred cccCC-ceEEEeeCCCcc
Confidence 44443 555555555554
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.29 E-value=8.8e-12 Score=128.37 Aligned_cols=143 Identities=17% Similarity=0.138 Sum_probs=114.1
Q ss_pred HHHhcCCCccccccccCCcceeec---ceEEEEEEEEeccCCcchhHHHHHHHhhhcc-CCceeEeeeeeecCCeEEEEE
Q 040702 508 FQATNRFSENNLIGRGGFGPVYKD---GMEVAIKVFNLQYGGAFKSFDIECGMMKRIR-HRNLIKIISSCSNDDFKALVL 583 (797)
Q Consensus 508 ~~~~~~f~~~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~lv~ 583 (797)
.....+|......+.|+.+.||+. +..+++|+...........+.+|+++++.+. +..++++++++...+..|+||
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 445567888888898999999973 5899999987643334467999999999985 678889999999889999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHcc---------------------------------------
Q 040702 584 EYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFG--------------------------------------- 624 (797)
Q Consensus 584 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~--------------------------------------- 624 (797)
||++|.++.+.... ......++.+++++++.||..
T Consensus 90 e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 90 SEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp ECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 99999999876321 123347889999999999951
Q ss_pred -----------------CCCCeEEcCCCCCceEEcCCCcEEEEeecCCc
Q 040702 625 -----------------YSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAK 656 (797)
Q Consensus 625 -----------------~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~ 656 (797)
....++|+|++|.||+++++..+.|+||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876666799999886
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.26 E-value=1.1e-10 Score=127.00 Aligned_cols=303 Identities=12% Similarity=0.078 Sum_probs=220.1
Q ss_pred ccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCccccccCCchhhCCCCCCEEEccCCcCcccCCccccCCC
Q 040702 71 TTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLR 150 (797)
Q Consensus 71 ~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~ 150 (797)
.++....+|+.+.+.. .++ .|+..+|.++.+|+.++|..+ ++.+...+|.+. +|+.+.+..+ ++.+...+|.+.
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt-~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~- 113 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GIT-SIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT- 113 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEE-EECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-
T ss_pred cccccccCCEEEEeCC-Ccc-ChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-
Confidence 3566677899999864 576 899999999999999999754 776777888876 7888888754 676888889875
Q ss_pred CCCeeeccCccCcCCCCCccccccCCCCCCCcEEEccCCCCCCCCChhhhccccCCcEEEccCCcccccCChhhhhhhhh
Q 040702 151 NLKWLGLNDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLGGILPRAIGNLSQSMEDFWMDNCNISGSIPEEINNLTNL 230 (797)
Q Consensus 151 ~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~~~~l~~L 230 (797)
+|+.+.+..+ ++.+... .|.+. +|+...+.. .+..+...+|.... .++...+..+........
T Consensus 114 ~L~~i~lp~~-~~~i~~~-----~F~~~-~l~~~~~~~-~v~~i~~~~f~~~~-~l~~~~~~~~~~~~~~~~-------- 176 (379)
T 4h09_A 114 DLDDFEFPGA-TTEIGNY-----IFYNS-SVKRIVIPK-SVTTIKDGIGYKAE-NLEKIEVSSNNKNYVAEN-------- 176 (379)
T ss_dssp CCSEEECCTT-CCEECTT-----TTTTC-CCCEEEECT-TCCEECSCTTTTCT-TCCEEEECTTCSSEEEET--------
T ss_pred CcccccCCCc-ccccccc-----ccccc-eeeeeeccc-eeeccccchhcccc-cccccccccccceeeccc--------
Confidence 8999999765 4444443 25544 566666654 35556666777665 677666655443311110
Q ss_pred HhhhcccccccccCCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCCCC-CCCCCCcccEEEcc
Q 040702 231 ILQLLSLEGNQLEGSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSIPS-TLWNLKDILHLNLS 309 (797)
Q Consensus 231 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~l~ 309 (797)
....+... .....+.....+..+.+..+. .......+....+|+.+.+..+ +..+.. .+.++..|+.+.+.
T Consensus 177 -----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp 248 (379)
T 4h09_A 177 -----YVLYNKNK-TILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIP 248 (379)
T ss_dssp -----TEEEETTS-SEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEEC
T ss_pred -----ceeccccc-ceeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcC
Confidence 00111111 233445556667777665543 3356677888889999988765 555544 67788999999998
Q ss_pred CCcCCCCCCccccccccccEEeccCcccccccCccccCCcccceecccCccccCCCChhhhccccCCeeeecCCcCCCCC
Q 040702 310 SNFFTGPLPLKIGNLNVLVQLDLSMNNFSCVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTI 389 (797)
Q Consensus 310 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 389 (797)
.+ ++.+....|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+.++.++.+...+|.++.+|+.++|..+ ++.+-
T Consensus 249 ~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~ 325 (379)
T 4h09_A 249 KN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQ 325 (379)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEEC
T ss_pred CC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEH
Confidence 76 66567788999999999999754 66577789999999999999999998777889999999999999765 77677
Q ss_pred ChhhhccCCCCeEEccCC
Q 040702 390 PISLEKLLDLKDINVSFN 407 (797)
Q Consensus 390 p~~~~~l~~L~~L~l~~N 407 (797)
..+|.++.+|+.+.+..+
T Consensus 326 ~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 326 VYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TTTTTTCTTCCCCCCCTT
T ss_pred HHHhhCCCCCCEEEECCc
Confidence 889999999999988654
No 408
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.22 E-value=3.8e-13 Score=145.46 Aligned_cols=159 Identities=20% Similarity=0.203 Sum_probs=106.2
Q ss_pred CCCCcEEEccCCcCcccCCCCccC-----CccccccccCCCCCCCC-CCCC-CCCCcccEEEccCCcCCCCCCcccc---
Q 040702 253 LAALFQLDLGGNKLSGFVPACSGN-----LTNLRKLYLGSNLLTSI-PSTL-WNLKDILHLNLSSNFFTGPLPLKIG--- 322 (797)
Q Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~l-p~~~-~~l~~L~~L~l~~N~l~~~~~~~~~--- 322 (797)
++.|+.|+|++|.++......+.. .++|+.|+|++|.++.. ...+ ..+++|+.|+|++|.++......+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 346777777777776443332222 25777778887777432 1122 2356788888888888644333332
Q ss_pred --ccccccEEeccCcccccc----cCccccCCcccceecccCccccCC----CChhhhccccCCeeeecCCcCCCC----
Q 040702 323 --NLNVLVQLDLSMNNFSCV----IPTKIGGLKDLQYLFLEYNRLQGS----IPNSIGDLISLKSLNLSNNNLSGT---- 388 (797)
Q Consensus 323 --~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~---- 388 (797)
..++|++|+|++|.|+.. ++..+..+++|++|+|++|+|.+. ++..+...++|++|+|++|.|+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 346788888888888643 334456778888899988888743 245566778899999999988753
Q ss_pred CChhhhccCCCCeEEccCCcCcc
Q 040702 389 IPISLEKLLDLKDINVSFNRLEG 411 (797)
Q Consensus 389 ~p~~~~~l~~L~~L~l~~N~l~~ 411 (797)
++..+...++|+.|+|++|+++.
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHHhCCCCCEEeccCCCCCH
Confidence 33445567889999999998764
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.02 E-value=3.1e-10 Score=116.41 Aligned_cols=134 Identities=13% Similarity=0.074 Sum_probs=98.1
Q ss_pred cCCCccccccccCCcceeec----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCc--eeEeeeeeecCCeEEEEEEc
Q 040702 512 NRFSENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRN--LIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 512 ~~f~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpn--iv~l~~~~~~~~~~~lv~e~ 585 (797)
.+|......+.|..+.||+. |..+++|+.... ....+..|+.+++.+.+.+ +++++++...++..++||||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 34544333345566899973 467999987543 3367889999999996544 56788888888889999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccC----------------------------------------
Q 040702 586 MPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGY---------------------------------------- 625 (797)
Q Consensus 586 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~---------------------------------------- 625 (797)
++|.++. ... .+ ...++.++++.+..||...
T Consensus 97 i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 97 VPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp CSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred cCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 9998874 211 12 2357788888889888321
Q ss_pred ---------------CCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 626 ---------------SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 626 ---------------~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
...++|+|++|.||++++++.+.|+|||.+..
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998876677999999863
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.92 E-value=1.5e-09 Score=117.12 Aligned_cols=139 Identities=12% Similarity=0.143 Sum_probs=103.9
Q ss_pred ccccccccCCcceeec---ceEEEEEEEE--ecc-CCcchhHHHHHHHhhhcc--CCceeEeeeeeecC---CeEEEEEE
Q 040702 516 ENNLIGRGGFGPVYKD---GMEVAIKVFN--LQY-GGAFKSFDIECGMMKRIR--HRNLIKIISSCSND---DFKALVLE 584 (797)
Q Consensus 516 ~~~~lg~G~~g~Vyk~---~~~vAvK~~~--~~~-~~~~~~~~~E~~~l~~l~--Hpniv~l~~~~~~~---~~~~lv~e 584 (797)
..+.++.|.++.||+. +..+++|+.. ... ......+.+|+.+++.+. +..++++++++.+. +..|+|||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred eEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4578899999999973 5778888775 332 122467889999999997 45688899988776 45899999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccC---------------------------------------
Q 040702 585 YMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGY--------------------------------------- 625 (797)
Q Consensus 585 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~--------------------------------------- 625 (797)
|++|..+.+.. ...++..+...++.+++++|..||...
T Consensus 122 ~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (359)
T 3dxp_A 122 FVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD 198 (359)
T ss_dssp CCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred ecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence 99987764311 113677788899999999999999420
Q ss_pred ----------------CCCeEEcCCCCCceEEcCCCc--EEEEeecCCcc
Q 040702 626 ----------------SVPIIHCDLKPSNVLLDDNMV--AHLSDFGMAKP 657 (797)
Q Consensus 626 ----------------~~~ivHrDlkp~NIll~~~~~--~kl~DFGla~~ 657 (797)
...++|+|++|.||+++.++. +.|+||+.+..
T Consensus 199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997653 68999999874
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=1.1e-09 Score=117.20 Aligned_cols=43 Identities=16% Similarity=0.051 Sum_probs=19.4
Q ss_pred CCCCEEeCCCCCCCCcCCCccccCCCccccCCCCCCEEEcccC
Q 040702 21 SSLQTLYLSYNPPSGSIPSFILCEIPHEIDNLHNMEWMAFSFN 63 (797)
Q Consensus 21 ~~L~~LdLs~N~~~~~~p~~~l~~ip~~~~~l~~L~~L~ls~N 63 (797)
..++.|.+......|......+..+..++..+++|+.|.+..+
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~ 149 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDI 149 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCc
Confidence 3455666654433210000112233344555666777766543
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.68 E-value=5e-09 Score=112.14 Aligned_cols=159 Identities=16% Similarity=0.113 Sum_probs=70.3
Q ss_pred hhhhhhhhHhhhccccccccc---------CCCchhhcCCCCCcEEEccCCcCcccCCCCccCCccccccccCCCCCCCC
Q 040702 223 EINNLTNLILQLLSLEGNQLE---------GSIPDDLCRLAALFQLDLGGNKLSGFVPACSGNLTNLRKLYLGSNLLTSI 293 (797)
Q Consensus 223 ~~~~l~~L~L~~L~Ls~N~l~---------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 293 (797)
++..+++| +.|.+..+... +.+...+..+++|+.|+|++|.-... +. +. +++|+.|+|..|.++.-
T Consensus 134 s~~~l~~L--~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~l-~~-~~-~~~L~~L~L~~~~l~~~ 208 (362)
T 2ra8_A 134 NKEKFAHF--EGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLSI-GK-KP-RPNLKSLEIISGGLPDS 208 (362)
T ss_dssp THHHHTTC--SEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCBC-CS-CB-CTTCSEEEEECSBCCHH
T ss_pred hhhhcchh--hheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCcee-cc-cc-CCCCcEEEEecCCCChH
Confidence 34455665 67766554321 11334445566777777766621111 11 22 55666666666555321
Q ss_pred C-CCC--CCCCcccEEEccC--CcCCCCC-----Cccc--cccccccEEeccCcccccccCccc---cCCcccceecccC
Q 040702 294 P-STL--WNLKDILHLNLSS--NFFTGPL-----PLKI--GNLNVLVQLDLSMNNFSCVIPTKI---GGLKDLQYLFLEY 358 (797)
Q Consensus 294 p-~~~--~~l~~L~~L~l~~--N~l~~~~-----~~~~--~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~Ls~ 358 (797)
. ..+ ..+++|+.|+|+. |...+.. ...+ ..+++|+.|+|++|.+....+..+ ..+++|++|+|+.
T Consensus 209 ~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~ 288 (362)
T 2ra8_A 209 VVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISA 288 (362)
T ss_dssp HHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCS
T ss_pred HHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCC
Confidence 0 111 1355666665532 1111100 0011 124555555555555543221111 1344555555555
Q ss_pred ccccCC----CChhhhccccCCeeeecCCcCC
Q 040702 359 NRLQGS----IPNSIGDLISLKSLNLSNNNLS 386 (797)
Q Consensus 359 N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 386 (797)
|.+.+. ++..+..+++|+.|+|++|.++
T Consensus 289 n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 289 GVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp SCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 555432 1222234455555555555554
No 413
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.60 E-value=7e-08 Score=102.06 Aligned_cols=136 Identities=15% Similarity=0.160 Sum_probs=102.4
Q ss_pred CCCccccccccCCcceeecceEEEEEEEEeccCCcchhHHHHHHHhhhccC----CceeEeeeeeecCCeEEEEEEccCC
Q 040702 513 RFSENNLIGRGGFGPVYKDGMEVAIKVFNLQYGGAFKSFDIECGMMKRIRH----RNLIKIISSCSNDDFKALVLEYMPL 588 (797)
Q Consensus 513 ~f~~~~~lg~G~~g~Vyk~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H----pniv~l~~~~~~~~~~~lv~e~~~~ 588 (797)
.....+.++.|....||+.+..+++|+..... ....+.+|.++++.+.+ ..+++++++ +..|+||||++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~vg~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLCNEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp CCSCEEEEEECSSEEEEEETTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred ceEEEEeCCCCCCceEEEECCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 56667889999999999988889999864322 13568899999988865 234555555 567899999999
Q ss_pred CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccC-------------------------------------------
Q 040702 589 GSLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGY------------------------------------------- 625 (797)
Q Consensus 589 g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~------------------------------------------- 625 (797)
.++...... .++..+...++.++++.++.||...
T Consensus 112 ~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (320)
T 3r70_A 112 ERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEH 188 (320)
T ss_dssp BCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred ccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHH
Confidence 888643322 2566677788888888888888321
Q ss_pred -----------------CCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 626 -----------------SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 626 -----------------~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
...++|+|++|.||+++.+..+.|+||+.+..
T Consensus 189 ~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 189 IETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12459999999999999876679999999874
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.55 E-value=7.7e-08 Score=100.99 Aligned_cols=136 Identities=20% Similarity=0.193 Sum_probs=101.1
Q ss_pred cccccccCCcceeecceEEEEEEEEeccCCcchhHHHHHHHhhhcc-CCc--eeEeeeeeecCC---eEEEEEEccCCCC
Q 040702 517 NNLIGRGGFGPVYKDGMEVAIKVFNLQYGGAFKSFDIECGMMKRIR-HRN--LIKIISSCSNDD---FKALVLEYMPLGS 590 (797)
Q Consensus 517 ~~~lg~G~~g~Vyk~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-Hpn--iv~l~~~~~~~~---~~~lv~e~~~~g~ 590 (797)
.+.++.|....||+.+..+++|+.... .....+.+|+++++.+. +.. +.+++......+ ..|+|||+++|.+
T Consensus 25 i~~~~~G~~n~v~~v~~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~ 102 (304)
T 3sg8_A 25 IEISGEGNDCIAYEINRDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVP 102 (304)
T ss_dssp CCEEEECSSEEEEESTTSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEE
T ss_pred eEecCCCCcceEEEECCEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeE
Confidence 456899999999998888999986533 23467889999998883 332 445555544333 4589999999988
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHcc----------------------------------------------
Q 040702 591 LEKCLYSGNYILDIFQGLNIMIDVASALEYLHFG---------------------------------------------- 624 (797)
Q Consensus 591 L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~---------------------------------------------- 624 (797)
+.+.... .++..++..++.++++.++.||..
T Consensus 103 l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (304)
T 3sg8_A 103 LTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRD 179 (304)
T ss_dssp CCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred CCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHH
Confidence 8654332 256777788888999988888841
Q ss_pred ---------CCCCeEEcCCCCCceEEcC--CCcEEEEeecCCcc
Q 040702 625 ---------YSVPIIHCDLKPSNVLLDD--NMVAHLSDFGMAKP 657 (797)
Q Consensus 625 ---------~~~~ivHrDlkp~NIll~~--~~~~kl~DFGla~~ 657 (797)
....++|+|++|.||++++ ...+.|+||+.+..
T Consensus 180 ~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 180 ILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp HHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred HHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 0135899999999999998 55688999999874
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.49 E-value=2.2e-08 Score=101.56 Aligned_cols=63 Identities=25% Similarity=0.390 Sum_probs=36.3
Q ss_pred CCCCccEEEccCccccc--cCCchhhCCCCCCEEEccCCcCcccCCccccCCC--CCCeeeccCccCcC
Q 040702 100 RLPNLKELHLWGNNFIG--TIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLR--NLKWLGLNDNYLTS 164 (797)
Q Consensus 100 ~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~--~L~~L~L~~N~l~~ 164 (797)
++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|+++ ..+..++ +|++|+|++|.+..
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc
Confidence 45566666666666654 2334555666666666666666654 2233333 66666666666654
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.46 E-value=2.2e-08 Score=96.73 Aligned_cols=116 Identities=14% Similarity=0.107 Sum_probs=71.4
Q ss_pred cccCCCCCCEEEcccC-ccccc----CCccccCCCCCCEEEccCCcCccc----CCCccccCCCCccEEEccCcccccc-
Q 040702 48 EIDNLHNMEWMAFSFN-KVVGV----VPTTIFNVSTLKSLYLHSNSLSGR----LPSSADVRLPNLKELHLWGNNFIGT- 117 (797)
Q Consensus 48 ~~~~l~~L~~L~ls~N-~i~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----l~~~~~~~l~~L~~L~L~~N~l~~~- 117 (797)
.+...++|+.|+|++| +|... +...+...++|++|+|++|.|... +.. .+...++|++|+|++|.|.+.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~-~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAE-MLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHH-HHHHCSSCCEEECCSSCCCHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHH-HHHhCCCcCEEECcCCcCCHHH
Confidence 3555666777777776 66532 334455566777777777777521 111 122346677777777777643
Q ss_pred ---CCchhhCCCCCCEEEc--cCCcCcccC----CccccCCCCCCeeeccCccCcC
Q 040702 118 ---IPSFIFNASKLSELGL--QKNSFSGSI----PNTFGNLRNLKWLGLNDNYLTS 164 (797)
Q Consensus 118 ---~~~~~~~l~~L~~L~L--~~N~l~~~~----~~~f~~l~~L~~L~L~~N~l~~ 164 (797)
+...+...+.|++|+| ++|.|+... ..++...++|++|+|++|.+..
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCCh
Confidence 3445566677888888 778777432 3344555778888888887653
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.45 E-value=2.9e-08 Score=100.73 Aligned_cols=99 Identities=24% Similarity=0.193 Sum_probs=66.7
Q ss_pred CCCccccCCCCccE--EEccCcccc---ccCCchhhCCCCCCEEEccCCcCcccC--CccccCCCCCCeeeccCccCcCC
Q 040702 93 LPSSADVRLPNLKE--LHLWGNNFI---GTIPSFIFNASKLSELGLQKNSFSGSI--PNTFGNLRNLKWLGLNDNYLTSS 165 (797)
Q Consensus 93 l~~~~~~~l~~L~~--L~L~~N~l~---~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~f~~l~~L~~L~L~~N~l~~~ 165 (797)
++-+.+...+.|+. ++++.|... ...+....++++|++|+|++|+|+++. |..+..+++|+.|+|++|+|+++
T Consensus 132 LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~ 211 (267)
T 3rw6_A 132 LDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 211 (267)
T ss_dssp EECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG
T ss_pred cCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc
Confidence 33333444555665 677777543 222223356889999999999998754 46778899999999999999876
Q ss_pred CCCccccccCCCCCCCcEEEccCCCCCCCCC
Q 040702 166 TPELSSLSSLSNCKYLEYFSFSNNPLGGILP 196 (797)
Q Consensus 166 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~ 196 (797)
. + +..+..+ +|+.|+|++|++.+..|
T Consensus 212 ~-~---l~~l~~l-~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 212 R-E---LDKIKGL-KLEELWLDGNSLCDTFR 237 (267)
T ss_dssp G-G---GGGGTTS-CCSEEECTTSTTGGGCS
T ss_pred h-h---hhhcccC-CcceEEccCCcCccccC
Confidence 2 2 2234444 78888888888875444
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.44 E-value=2.5e-08 Score=96.30 Aligned_cols=123 Identities=15% Similarity=0.139 Sum_probs=87.6
Q ss_pred cCCccccCCCCCCEEEccCC-cCccc----CCCccccCCCCccEEEccCcccccc----CCchhhCCCCCCEEEccCCcC
Q 040702 68 VVPTTIFNVSTLKSLYLHSN-SLSGR----LPSSADVRLPNLKELHLWGNNFIGT----IPSFIFNASKLSELGLQKNSF 138 (797)
Q Consensus 68 ~~p~~~~~l~~L~~L~Ls~N-~l~~~----l~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l 138 (797)
.+...+...++|++|+|++| .|... +.. .+...++|++|+|++|.|... +...+...+.|++|+|++|.|
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~-~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAE-ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHH-HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHH-HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcC
Confidence 34556777889999999999 88621 111 224568899999999998753 234555668899999999999
Q ss_pred ccc----CCccccCCCCCCeeec--cCccCcCCCCCccccccCCCCCCCcEEEccCCCCC
Q 040702 139 SGS----IPNTFGNLRNLKWLGL--NDNYLTSSTPELSSLSSLSNCKYLEYFSFSNNPLG 192 (797)
Q Consensus 139 ~~~----~~~~f~~l~~L~~L~L--~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 192 (797)
+.. +..++...++|++|+| ++|.|+...... -...+...++|++|+|++|.+.
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~-l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEME-IANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH-HHHHHHHCSSCCEEECCCSSHH
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHH-HHHHHHhCCCcCEEeccCCCCC
Confidence 854 3556777788999999 889887632210 0012455678999999999875
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.35 E-value=8.8e-07 Score=92.84 Aligned_cols=136 Identities=15% Similarity=0.063 Sum_probs=95.9
Q ss_pred cccccccCCcceeecceEEEEEEEEeccCCcchhHHHHHHHhhhccCC---ceeEeeeeee-cCCeEEEEEEccCCCCHH
Q 040702 517 NNLIGRGGFGPVYKDGMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHR---NLIKIISSCS-NDDFKALVLEYMPLGSLE 592 (797)
Q Consensus 517 ~~~lg~G~~g~Vyk~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hp---niv~l~~~~~-~~~~~~lv~e~~~~g~L~ 592 (797)
.+.++.|....||+-+..+++|+.+. ......+.+|+++++.+.+. .+.+.+.++. ..+..++||||++|.++.
T Consensus 24 v~~l~~G~~n~v~~vg~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~ 101 (306)
T 3tdw_A 24 VESLGEGFRNYAILVNGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILG 101 (306)
T ss_dssp EEEEEECSSEEEEEETTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECH
T ss_pred eeecCCCcceeEEEECCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECc
Confidence 45678888889999888899998532 12346788999999999742 3667777764 455678999999998876
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHcc------------------------------------------------
Q 040702 593 KCLYSGNYILDIFQGLNIMIDVASALEYLHFG------------------------------------------------ 624 (797)
Q Consensus 593 ~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~------------------------------------------------ 624 (797)
+..... ++..+...++.++++.++.||..
T Consensus 102 ~~~~~~---l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 178 (306)
T 3tdw_A 102 EDGMAV---LPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQS 178 (306)
T ss_dssp HHHHTT---SCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHH
T ss_pred hhhhhh---CCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHH
Confidence 532211 34445555566666666666521
Q ss_pred ---------CCCCeEEcCCCCCceEEcC---CCc-EEEEeecCCcc
Q 040702 625 ---------YSVPIIHCDLKPSNVLLDD---NMV-AHLSDFGMAKP 657 (797)
Q Consensus 625 ---------~~~~ivHrDlkp~NIll~~---~~~-~kl~DFGla~~ 657 (797)
....++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 179 ~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 179 YMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1345799999999999987 455 48999998874
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.28 E-value=3.3e-06 Score=86.72 Aligned_cols=131 Identities=19% Similarity=0.109 Sum_probs=96.8
Q ss_pred cccccCCc-ceee-----cceEEEEEEEEeccCCcchhHHHHHHHhhhcc-CCceeEeeeeeecCCeEEEEEEccCCCCH
Q 040702 519 LIGRGGFG-PVYK-----DGMEVAIKVFNLQYGGAFKSFDIECGMMKRIR-HRNLIKIISSCSNDDFKALVLEYMPLGSL 591 (797)
Q Consensus 519 ~lg~G~~g-~Vyk-----~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~lv~e~~~~g~L 591 (797)
.+..|..| .||+ ++..+++|+-... ...++.+|...|+.+. +--+.++++++.+++..|+|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 44556555 5886 3567899986643 2457888999998884 33477889999999999999999999888
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHcc-----------------------------------------------
Q 040702 592 EKCLYSGNYILDIFQGLNIMIDVASALEYLHFG----------------------------------------------- 624 (797)
Q Consensus 592 ~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~----------------------------------------------- 624 (797)
.+...... .....++.+++..++.||..
T Consensus 108 ~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 77654321 23345677778888888831
Q ss_pred --------CCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 625 --------YSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 625 --------~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
....++|+|+.+.||++++++.+-|+||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012379999999999999887778999998863
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.07 E-value=6.5e-06 Score=88.26 Aligned_cols=72 Identities=8% Similarity=0.079 Sum_probs=54.1
Q ss_pred CccccccccCCcceee---cceEEEEEEEEeccCCcchhHHHHHHHhhhccCC--ceeEeeeeeecC-CeEEEEEEccCC
Q 040702 515 SENNLIGRGGFGPVYK---DGMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHR--NLIKIISSCSND-DFKALVLEYMPL 588 (797)
Q Consensus 515 ~~~~~lg~G~~g~Vyk---~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hp--niv~l~~~~~~~-~~~~lv~e~~~~ 588 (797)
...+.++.|....+|+ ++..+++|+.... ..+..|+.+++.+... .+.++++++... +..|+||||++|
T Consensus 44 ~~i~~l~gG~~n~~y~v~~~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDVGGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEEECSSEEEEEEEETTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred ceEEECCCCCcceEEEEEECCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 3456788899999997 3788999987422 3688999999988643 356777776654 678999999987
Q ss_pred CCH
Q 040702 589 GSL 591 (797)
Q Consensus 589 g~L 591 (797)
.++
T Consensus 119 ~~l 121 (362)
T 3ovc_A 119 VTL 121 (362)
T ss_dssp EET
T ss_pred CCc
Confidence 654
No 422
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.05 E-value=9e-06 Score=84.07 Aligned_cols=73 Identities=11% Similarity=0.041 Sum_probs=56.9
Q ss_pred CccccccccCCcceeec----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCC---ceeEeeeeeecCCeEEEEEEccC
Q 040702 515 SENNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHR---NLIKIISSCSNDDFKALVLEYMP 587 (797)
Q Consensus 515 ~~~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hp---niv~l~~~~~~~~~~~lv~e~~~ 587 (797)
...+.+|.|.++.||+. |..++||+...........+..|++.++.+++. .+++++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 34578999999999984 688999986543333347889999999999865 577887763 3689999999
Q ss_pred CCCH
Q 040702 588 LGSL 591 (797)
Q Consensus 588 ~g~L 591 (797)
++++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8864
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.98 E-value=8.3e-06 Score=87.44 Aligned_cols=76 Identities=5% Similarity=-0.062 Sum_probs=53.5
Q ss_pred cccc-cccCCcceeec-----------ceEEEEEEEEecc---CCcchhHHHHHHHhhhcc-C--CceeEeeeeeecC--
Q 040702 517 NNLI-GRGGFGPVYKD-----------GMEVAIKVFNLQY---GGAFKSFDIECGMMKRIR-H--RNLIKIISSCSND-- 576 (797)
Q Consensus 517 ~~~l-g~G~~g~Vyk~-----------~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~-H--pniv~l~~~~~~~-- 576 (797)
.+.| +.|....+|+- +..+++|+..... ......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3566 77888888862 5678888765433 112367889999999885 3 3577888887665
Q ss_pred -CeEEEEEEccCCCCHH
Q 040702 577 -DFKALVLEYMPLGSLE 592 (797)
Q Consensus 577 -~~~~lv~e~~~~g~L~ 592 (797)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3578999999886543
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.82 E-value=6.3e-06 Score=77.43 Aligned_cols=83 Identities=11% Similarity=0.138 Sum_probs=40.7
Q ss_pred CccEEEccCccccccCCchhhCCCCCCEEEccCCc-CcccCCccccCC----CCCCeeeccCcc-CcCCCCCccccccCC
Q 040702 103 NLKELHLWGNNFIGTIPSFIFNASKLSELGLQKNS-FSGSIPNTFGNL----RNLKWLGLNDNY-LTSSTPELSSLSSLS 176 (797)
Q Consensus 103 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~f~~l----~~L~~L~L~~N~-l~~~~~~~~~~~~l~ 176 (797)
+|++|||+++.|+..--..+.++++|++|+|++|. |+...-..+..+ ++|++|+|++|. |+...- ..+.
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl-----~~L~ 136 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI-----IALH 136 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH-----HHGG
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH-----HHHh
Confidence 45555555555444333444555555555555553 443222333333 246666666653 443221 1244
Q ss_pred CCCCCcEEEccCCC
Q 040702 177 NCKYLEYFSFSNNP 190 (797)
Q Consensus 177 ~l~~L~~L~Ls~N~ 190 (797)
.+++|++|+++++.
T Consensus 137 ~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 137 HFRNLKYLFLSDLP 150 (176)
T ss_dssp GCTTCCEEEEESCT
T ss_pred cCCCCCEEECCCCC
Confidence 55666666666654
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.71 E-value=7.5e-05 Score=79.32 Aligned_cols=136 Identities=15% Similarity=0.079 Sum_probs=78.4
Q ss_pred ccccccCCcceeec---ceEEEEEEEEeccCCcchhHHHHHHHhhhccC--CceeEeee------eeecCCeEEEEEEcc
Q 040702 518 NLIGRGGFGPVYKD---GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRH--RNLIKIIS------SCSNDDFKALVLEYM 586 (797)
Q Consensus 518 ~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H--pniv~l~~------~~~~~~~~~lv~e~~ 586 (797)
+.++.|..+.||+. +..+++|+.... ...+..|+.+++.+.. -.+++++. +....+..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTEEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCCCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 45666778889973 356899988642 2445556666666641 12344443 123466789999999
Q ss_pred CCCCHH-----H---------HHhc--C----CC-------CCCHHHH-------------------------------H
Q 040702 587 PLGSLE-----K---------CLYS--G----NY-------ILDIFQG-------------------------------L 608 (797)
Q Consensus 587 ~~g~L~-----~---------~l~~--~----~~-------~l~~~~~-------------------------------~ 608 (797)
+|..+. . .++. . .. .-.|... .
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986431 0 1111 0 00 0122211 0
Q ss_pred HHHHHHHHHHHHHHc----------cCCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 609 NIMIDVASALEYLHF----------GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 609 ~i~~qi~~al~yLH~----------~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
.+..++..++++|+. .....++|+|+++.||+++.++.+.|+||+.+..
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 111223345666652 0257899999999999998888999999998863
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.66 E-value=0.0001 Score=80.07 Aligned_cols=71 Identities=17% Similarity=0.132 Sum_probs=48.6
Q ss_pred cccccccCCcceeec-----ceEEEEEEEEeccC-------CcchhHHHHHHHhhhccC--C-ceeEeeeeeecCCeEEE
Q 040702 517 NNLIGRGGFGPVYKD-----GMEVAIKVFNLQYG-------GAFKSFDIECGMMKRIRH--R-NLIKIISSCSNDDFKAL 581 (797)
Q Consensus 517 ~~~lg~G~~g~Vyk~-----~~~vAvK~~~~~~~-------~~~~~~~~E~~~l~~l~H--p-niv~l~~~~~~~~~~~l 581 (797)
.+.+|.|.++.||+. ++.|+||....... ...+.+..|.++++.+.. | .+++++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467899999999985 36799998653211 124567889999988742 3 44566654 3445689
Q ss_pred EEEccCCC
Q 040702 582 VLEYMPLG 589 (797)
Q Consensus 582 v~e~~~~g 589 (797)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.65 E-value=2.2e-05 Score=73.71 Aligned_cols=83 Identities=12% Similarity=0.034 Sum_probs=41.2
Q ss_pred CcccEEEccCCcCCCCCCccccccccccEEeccCcc-cccccCccccCC----cccceecccCcc-ccCCCChhhhcccc
Q 040702 301 KDILHLNLSSNFFTGPLPLKIGNLNVLVQLDLSMNN-FSCVIPTKIGGL----KDLQYLFLEYNR-LQGSIPNSIGDLIS 374 (797)
Q Consensus 301 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 374 (797)
.+|++||++++.++..--..+.++++|+.|+|++|. |+...-..+..+ ++|++|+|+++. +++.--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356666666666654333344555666666666653 443322233332 245555555543 44333334444555
Q ss_pred CCeeeecCC
Q 040702 375 LKSLNLSNN 383 (797)
Q Consensus 375 L~~L~Ls~N 383 (797)
|++|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555554
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.53 E-value=0.00024 Score=74.05 Aligned_cols=134 Identities=13% Similarity=0.079 Sum_probs=89.7
Q ss_pred ccccccccCCcceee---cceEEEEEEEEeccCCcchhHHHHHHHhhhcc---CCceeEeeeeeecCCeEEEEEEccCCC
Q 040702 516 ENNLIGRGGFGPVYK---DGMEVAIKVFNLQYGGAFKSFDIECGMMKRIR---HRNLIKIISSCSNDDFKALVLEYMPLG 589 (797)
Q Consensus 516 ~~~~lg~G~~g~Vyk---~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---Hpniv~l~~~~~~~~~~~lv~e~~~~g 589 (797)
..+.++.|....+|+ ++..+++|+.... ....+..|++.|+.+. ...++++++++...+..++||||+++.
T Consensus 40 ~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDEVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEEECCSSSSEEEEEESSSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eeEEeCCccceeeeEEEECCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 346789999999997 3578899987643 2467889999998884 357888999888888999999999987
Q ss_pred CHH--------H---HHhcCCC---------------------CCCHHHHH---HHHH----------------HHHHHH
Q 040702 590 SLE--------K---CLYSGNY---------------------ILDIFQGL---NIMI----------------DVASAL 618 (797)
Q Consensus 590 ~L~--------~---~l~~~~~---------------------~l~~~~~~---~i~~----------------qi~~al 618 (797)
.+. + .++.... .-+|.... ++.. ++...+
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 541 1 1222110 01344321 1111 111111
Q ss_pred -HHHH-ccCCCCeEEcCCCCCceEEcCCCcEEEEeec
Q 040702 619 -EYLH-FGYSVPIIHCDLKPSNVLLDDNMVAHLSDFG 653 (797)
Q Consensus 619 -~yLH-~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG 653 (797)
..|. ......++|+|+.+.|++++.++ +.|+||+
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 2332 12256799999999999999887 8899984
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.14 E-value=0.00013 Score=69.84 Aligned_cols=119 Identities=10% Similarity=0.083 Sum_probs=61.3
Q ss_pred ccCCCCCCEEEccCC-cCcc----cCCCccccCCCCccEEEccCccccccC----CchhhCCCCCCEEEccCCcCcccC-
Q 040702 73 IFNVSTLKSLYLHSN-SLSG----RLPSSADVRLPNLKELHLWGNNFIGTI----PSFIFNASKLSELGLQKNSFSGSI- 142 (797)
Q Consensus 73 ~~~l~~L~~L~Ls~N-~l~~----~l~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~- 142 (797)
+.+-+.|++|+|++| +|.. .+-. +...-+.|++|+|++|+|.+.. ...+..-+.|++|+|++|+|....
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~-aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIE-AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHH-HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHH-HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 344456666666654 5531 0111 1123456666666666665322 233445566777777777776332
Q ss_pred ---CccccCCCCCCeeeccCccCcCCCCCc--cccccCCCCCCCcEEEccCCCCC
Q 040702 143 ---PNTFGNLRNLKWLGLNDNYLTSSTPEL--SSLSSLSNCKYLEYFSFSNNPLG 192 (797)
Q Consensus 143 ---~~~f~~l~~L~~L~L~~N~l~~~~~~~--~~~~~l~~l~~L~~L~Ls~N~l~ 192 (797)
..++..-+.|++|+|++|....+.... .-...+..-+.|+.|+++.|.+.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 223444456777777755331111110 00012445567888888877654
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.06 E-value=0.00069 Score=60.51 Aligned_cols=37 Identities=24% Similarity=0.251 Sum_probs=19.5
Q ss_pred CCCEEEccCCcCcccCCccccCCCCCCeeeccCccCc
Q 040702 127 KLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDNYLT 163 (797)
Q Consensus 127 ~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~ 163 (797)
+|++|+|++|+|+.+.+++|..+++|++|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3455555555555555555555555555555555443
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.00 E-value=0.001 Score=59.36 Aligned_cols=56 Identities=25% Similarity=0.328 Sum_probs=35.6
Q ss_pred EEEcccCccc-ccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccCcccc
Q 040702 57 WMAFSFNKVV-GVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWGNNFI 115 (797)
Q Consensus 57 ~L~ls~N~i~-~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~N~l~ 115 (797)
.++.++++++ ..+|..+ -++|+.|+|++|+|+ .+|..+|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 5666666665 1234332 135777777777776 777777777777777777777653
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.96 E-value=0.00018 Score=68.84 Aligned_cols=112 Identities=10% Similarity=0.115 Sum_probs=66.7
Q ss_pred cCCCCCCEEEcccC-ccccc----CCccccCCCCCCEEEccCCcCcccCCCc----cccCCCCccEEEccCccccccC--
Q 040702 50 DNLHNMEWMAFSFN-KVVGV----VPTTIFNVSTLKSLYLHSNSLSGRLPSS----ADVRLPNLKELHLWGNNFIGTI-- 118 (797)
Q Consensus 50 ~~l~~L~~L~ls~N-~i~~~----~p~~~~~l~~L~~L~Ls~N~l~~~l~~~----~~~~l~~L~~L~L~~N~l~~~~-- 118 (797)
.+-+.|+.|+|++| +|... +-.++..-+.|+.|+|++|+|. .-... +...-+.|++|+|++|.|.+.-
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~ig-d~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS-DSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB-HHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCC-hHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 34456777777764 66432 3345555667788888888775 21111 1123467888888888876432
Q ss_pred --CchhhCCCCCCEEEccCCc---Cccc----CCccccCCCCCCeeeccCccC
Q 040702 119 --PSFIFNASKLSELGLQKNS---FSGS----IPNTFGNLRNLKWLGLNDNYL 162 (797)
Q Consensus 119 --~~~~~~l~~L~~L~L~~N~---l~~~----~~~~f~~l~~L~~L~L~~N~l 162 (797)
..++..-+.|++|+|++|. |... +..++..-+.|+.|+++.|.+
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 2344455668888887653 3321 233455567788888877754
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.88 E-value=0.0026 Score=66.03 Aligned_cols=128 Identities=12% Similarity=0.088 Sum_probs=76.7
Q ss_pred ccccccccCCcceeecceEEEEEEEEeccCCcchhHHHHHHHhhhccCCce-eEeeeeeecCCeEEEEEEcc-CCCCHHH
Q 040702 516 ENNLIGRGGFGPVYKDGMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNL-IKIISSCSNDDFKALVLEYM-PLGSLEK 593 (797)
Q Consensus 516 ~~~~lg~G~~g~Vyk~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpni-v~l~~~~~~~~~~~lv~e~~-~~g~L~~ 593 (797)
..+.++.|....+|+- ..+++|+....... .....+|+.+++.+....+ .++++++ ++..++|+||+ +|.++..
T Consensus 22 ~i~~l~gG~tN~~~~~-~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~l~~ 97 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA-GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQTMSP 97 (301)
T ss_dssp SCEEEESCSSEEEEEE-TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEECCH
T ss_pred ceeEcCCcccccccee-eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCccCCH
Confidence 3678888999999988 77888887654222 2344678888887752222 4555543 33357899999 5544321
Q ss_pred H-HhcCCCCCCHHHHHHHHHHHHHHHHHHHc-------------------------------------------------
Q 040702 594 C-LYSGNYILDIFQGLNIMIDVASALEYLHF------------------------------------------------- 623 (797)
Q Consensus 594 ~-l~~~~~~l~~~~~~~i~~qi~~al~yLH~------------------------------------------------- 623 (797)
. +.. +..++.++++.|+-+|.
T Consensus 98 ~~~~~---------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 168 (301)
T 3dxq_A 98 EKFKT---------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAA 168 (301)
T ss_dssp HHHHH---------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHS
T ss_pred hhHhh---------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHh
Confidence 0 000 00112222222222221
Q ss_pred -cCCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 624 -GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 624 -~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
.....++|+|+.+.||+ ..++.+.++||..+..
T Consensus 169 ~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 169 HPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp SCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred cCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 12345899999999999 5667889999998864
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.85 E-value=0.0034 Score=65.75 Aligned_cols=155 Identities=15% Similarity=0.151 Sum_probs=87.7
Q ss_pred ccCHHHHHHHhcCCCc-----cccccccCCcceeec---ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCc--eeEee
Q 040702 501 RFTYLELFQATNRFSE-----NNLIGRGGFGPVYKD---GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRN--LIKII 570 (797)
Q Consensus 501 ~~~~~~l~~~~~~f~~-----~~~lg~G~~g~Vyk~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpn--iv~l~ 570 (797)
.++.+++......|.. .+.++.|....+|+- +..+++|+.... .....+..|+.+++.+.... +.+++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCccEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 4556666666666754 245666777888872 347889988653 12356777888888775222 33444
Q ss_pred ee------eecCCeEEEEEEccCCCCHH-----HH---------HhcC--C--CC----C---CHHHHHH----------
Q 040702 571 SS------CSNDDFKALVLEYMPLGSLE-----KC---------LYSG--N--YI----L---DIFQGLN---------- 609 (797)
Q Consensus 571 ~~------~~~~~~~~lv~e~~~~g~L~-----~~---------l~~~--~--~~----l---~~~~~~~---------- 609 (797)
.. ....+..+++|+|++|..+. .+ ++.. . .. . .|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 22 12345678999999875421 10 1110 0 00 0 1221100
Q ss_pred --HHHHHHHHHHHHHcc----CCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 610 --IMIDVASALEYLHFG----YSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 610 --i~~qi~~al~yLH~~----~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
+...+.+.+++++.. ...+++|+|+.+.||++++++.+.|+||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 001134445555421 245799999999999999876668999998863
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.83 E-value=0.0028 Score=66.73 Aligned_cols=135 Identities=11% Similarity=0.045 Sum_probs=71.2
Q ss_pred ccccccCCcc-eee---c-ceEEEEEEEEeccCCcchhHHHHHHHhhhccC--CceeEeeeeeecCCeEEEEEEccCCCC
Q 040702 518 NLIGRGGFGP-VYK---D-GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRH--RNLIKIISSCSNDDFKALVLEYMPLGS 590 (797)
Q Consensus 518 ~~lg~G~~g~-Vyk---~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H--pniv~l~~~~~~~~~~~lv~e~~~~g~ 590 (797)
+.++.|+... +|+ + +..+++|...... ...+..|+.+++.+.. -.+++++.+....+ ++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4565554443 554 2 5667776543221 1455667888777742 23556666644333 78999997766
Q ss_pred HHHHHhcCC-------------------------CCCCHHHHH-------HH-------------HHHHHHHHHHHH---
Q 040702 591 LEKCLYSGN-------------------------YILDIFQGL-------NI-------------MIDVASALEYLH--- 622 (797)
Q Consensus 591 L~~~l~~~~-------------------------~~l~~~~~~-------~i-------------~~qi~~al~yLH--- 622 (797)
+.+.+.... ..++..... .+ ...+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 654432210 011111100 00 001111222221
Q ss_pred ccCCCCeEEcCCCCCceEEcCC----CcEEEEeecCCcc
Q 040702 623 FGYSVPIIHCDLKPSNVLLDDN----MVAHLSDFGMAKP 657 (797)
Q Consensus 623 ~~~~~~ivHrDlkp~NIll~~~----~~~kl~DFGla~~ 657 (797)
......++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1125689999999999999874 6899999999874
No 436
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.82 E-value=0.0021 Score=70.18 Aligned_cols=31 Identities=19% Similarity=0.317 Sum_probs=28.2
Q ss_pred CCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 626 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 626 ~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
...++|+|++|.|||++.++ ++++||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 77899999999999998776 99999999874
No 437
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.64 E-value=0.0061 Score=62.69 Aligned_cols=74 Identities=12% Similarity=0.084 Sum_probs=52.1
Q ss_pred CCCccccccccCCcceee----cceEEEEEEEEeccCCcchhHHHHHHHhhhcc-C--CceeEeeeeeecCCeEEEEEEc
Q 040702 513 RFSENNLIGRGGFGPVYK----DGMEVAIKVFNLQYGGAFKSFDIECGMMKRIR-H--RNLIKIISSCSNDDFKALVLEY 585 (797)
Q Consensus 513 ~f~~~~~lg~G~~g~Vyk----~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H--pniv~l~~~~~~~~~~~lv~e~ 585 (797)
.....+.+|.|..+.||+ +|+.|.+|+-..........|..|++.|+.+. . --+++++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 345567889999999998 47899999865443333457889999999884 2 2344555542 24789999
Q ss_pred cCCCC
Q 040702 586 MPLGS 590 (797)
Q Consensus 586 ~~~g~ 590 (797)
++++.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 98764
No 438
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.40 E-value=0.023 Score=59.41 Aligned_cols=154 Identities=10% Similarity=0.064 Sum_probs=86.7
Q ss_pred CccCHHHHHHHhcCCCc-----cccccccCCcceeec----ceEEEEEEEEeccCCcchhHHHHHHHhhhccCC--ceeE
Q 040702 500 RRFTYLELFQATNRFSE-----NNLIGRGGFGPVYKD----GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHR--NLIK 568 (797)
Q Consensus 500 ~~~~~~~l~~~~~~f~~-----~~~lg~G~~g~Vyk~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hp--niv~ 568 (797)
...+.+++......|.. ...++ |....||+- |+.+++|+.+... .....+..|..+++.+... .+++
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecc
Confidence 34555556555555532 24566 777888972 4579999986432 2345677788888887522 2444
Q ss_pred eeee-----eecCCeEEEEEEccCCCCHH-----HH---------Hhc----CC----CCCCHHHH----HHH-------
Q 040702 569 IISS-----CSNDDFKALVLEYMPLGSLE-----KC---------LYS----GN----YILDIFQG----LNI------- 610 (797)
Q Consensus 569 l~~~-----~~~~~~~~lv~e~~~~g~L~-----~~---------l~~----~~----~~l~~~~~----~~i------- 610 (797)
++.. ....+..++||||++|..+. .. ++. .. ...++... ..+
T Consensus 87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (328)
T 1zyl_A 87 PVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLI 166 (328)
T ss_dssp CCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSS
T ss_pred eeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcC
Confidence 4443 22345678999999874321 11 111 00 01222111 001
Q ss_pred --------HHHHHHHHHHHHc----cCCCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 611 --------MIDVASALEYLHF----GYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 611 --------~~qi~~al~yLH~----~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
...+...++.+.. .....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 167 PSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 0111112222221 1256689999999999999 4 899999998863
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.90 E-value=0.0048 Score=67.43 Aligned_cols=67 Identities=18% Similarity=0.183 Sum_probs=43.8
Q ss_pred ccccccCCcceeec------------ceEEEEEEEEeccCCcchhHHHHHHHhhhccCCce-eEeeeeeecCCeEEEEEE
Q 040702 518 NLIGRGGFGPVYKD------------GMEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNL-IKIISSCSNDDFKALVLE 584 (797)
Q Consensus 518 ~~lg~G~~g~Vyk~------------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpni-v~l~~~~~~~~~~~lv~e 584 (797)
+.|+.|....||+. +..|++|+.... .....+..|..+++.+...++ +++++.+.+ .+|||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 56777777888862 257888887321 111566689999988853333 566666542 38999
Q ss_pred ccCCCC
Q 040702 585 YMPLGS 590 (797)
Q Consensus 585 ~~~~g~ 590 (797)
|++|.+
T Consensus 153 ~l~G~~ 158 (429)
T 1nw1_A 153 YIPSRP 158 (429)
T ss_dssp CCCEEE
T ss_pred EeCCcc
Confidence 998643
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.78 E-value=0.014 Score=64.09 Aligned_cols=69 Identities=14% Similarity=0.114 Sum_probs=42.8
Q ss_pred cccccccCCcceeec---c--eEEEEEEEEeccCCcchhHHHHHHHhhhccCCce-eEeeeeeecCCeEEEEEEccCCCC
Q 040702 517 NNLIGRGGFGPVYKD---G--MEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRNL-IKIISSCSNDDFKALVLEYMPLGS 590 (797)
Q Consensus 517 ~~~lg~G~~g~Vyk~---~--~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpni-v~l~~~~~~~~~~~lv~e~~~~g~ 590 (797)
.+.|+.|-...+|+- + ..|++|+....... .-+-.+|..+++.+...++ +++++++. + ..||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 356777777888872 2 77888877433221 1223689999998864333 56777663 2 25999998743
No 441
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.64 E-value=0.027 Score=60.07 Aligned_cols=135 Identities=14% Similarity=0.130 Sum_probs=77.8
Q ss_pred ccccccCCcceeec------------ceEEEEEEEEeccCCcchhHHHHHHHhhhcc-CCceeEeeeeeecCCeEEEEEE
Q 040702 518 NLIGRGGFGPVYKD------------GMEVAIKVFNLQYGGAFKSFDIECGMMKRIR-HRNLIKIISSCSNDDFKALVLE 584 (797)
Q Consensus 518 ~~lg~G~~g~Vyk~------------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~lv~e 584 (797)
+.+..|-...+|+- +..|++|+..... .....+.+|.++++.+. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45656666777762 2578888753221 23456678999998885 3223566666643 28999
Q ss_pred ccCCCCHHH--------------H---HhcCC----CCCC--HHHHHHHHHHHHH-------------------HHHHHH
Q 040702 585 YMPLGSLEK--------------C---LYSGN----YILD--IFQGLNIMIDVAS-------------------ALEYLH 622 (797)
Q Consensus 585 ~~~~g~L~~--------------~---l~~~~----~~l~--~~~~~~i~~qi~~-------------------al~yLH 622 (797)
|++|.++.. . ++... .... +.+..++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 998754421 1 12211 1112 3444555544322 223332
Q ss_pred ----c-cCCCCeEEcCCCCCceEEcCC----CcEEEEeecCCcc
Q 040702 623 ----F-GYSVPIIHCDLKPSNVLLDDN----MVAHLSDFGMAKP 657 (797)
Q Consensus 623 ----~-~~~~~ivHrDlkp~NIll~~~----~~~kl~DFGla~~ 657 (797)
. .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1 124568999999999999876 7899999998863
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.35 E-value=0.015 Score=62.16 Aligned_cols=68 Identities=9% Similarity=0.125 Sum_probs=39.5
Q ss_pred ccccccCCcceeec---c----------eEEEEEEEEeccCCcchhHHHHHHHhhhccCCc-eeEeeeeeecCCeEEEEE
Q 040702 518 NLIGRGGFGPVYKD---G----------MEVAIKVFNLQYGGAFKSFDIECGMMKRIRHRN-LIKIISSCSNDDFKALVL 583 (797)
Q Consensus 518 ~~lg~G~~g~Vyk~---~----------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~Hpn-iv~l~~~~~~~~~~~lv~ 583 (797)
+.++.|....+|+- + ..+++|+...... .......|.++++.+...+ ++++++.. . .++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 46677777788862 1 5788887643321 1223467888888885333 44666544 2 36899
Q ss_pred EccCCCC
Q 040702 584 EYMPLGS 590 (797)
Q Consensus 584 e~~~~g~ 590 (797)
||++|..
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998753
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.07 E-value=0.079 Score=55.69 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=28.3
Q ss_pred CCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 626 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 626 ~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 45799999999999999888899999988764
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.77 E-value=0.095 Score=50.30 Aligned_cols=138 Identities=12% Similarity=0.021 Sum_probs=90.1
Q ss_pred CHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceEEcCCCcEEEEeecCCccCCccCccccccc
Q 040702 590 SLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKPLLEEDQSLTQTQ 669 (797)
Q Consensus 590 ~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~ 669 (797)
+|.+++...+.++++.++|.++.|.+.+|.-.-. .+.-..+=+-|..|++..+|.+.+.+ +.+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 8999999888889999999999999999887620 11111233446889999999887653 1111
Q ss_pred cccCcccccccccccCccchHHHHHHHhhhhhhhhccccccchhhhhhhcccccchhccccC------------------
Q 040702 670 TLATIGYMAPDEIFSGEMRLKCWVNDSLLISVMIVVDANLLIREEKHLMTKEQPMVRMGTDL------------------ 731 (797)
Q Consensus 670 ~~gt~~y~aPE~~~~~~~~~~~dv~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~------------------ 731 (797)
.....+.|||... ...+.+.-|+++|...+. ..|..+....+.+..+.+..++..|...
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~-ALDygL~e~eE~eLS~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~ 174 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYK-ALDYGLKENEERELSPPLEQLIDHMANTVEADGSNDEGYEAAEEGL 174 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHH-HHTTTCCTTEEECCCHHHHHHHHHHTTCCC----------------
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHH-HhhcCCCcccchhhCHHHHHHHHHHHhccccccccccccccccccc
Confidence 1122466887663 345688899999988643 3466666667777777777778777654
Q ss_pred -------CCCCCCChHHHHHhH
Q 040702 732 -------SLGQFPASYSISKYL 746 (797)
Q Consensus 732 -------dp~~RPs~~~i~~~l 746 (797)
.+..|++.++|++..
T Consensus 175 ~d~~~~~~~~~~~sl~~Vi~~C 196 (229)
T 2yle_A 175 GDEDEKRKISAIRSYRDVMKLC 196 (229)
T ss_dssp ----CCSCCCCCCSHHHHHHHH
T ss_pred ccccccccccCcCCHHHHHHHH
Confidence 235777877777654
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.79 E-value=0.15 Score=54.63 Aligned_cols=32 Identities=28% Similarity=0.319 Sum_probs=27.9
Q ss_pred CCCeEEcCCCCCceEEcCC------CcEEEEeecCCcc
Q 040702 626 SVPIIHCDLKPSNVLLDDN------MVAHLSDFGMAKP 657 (797)
Q Consensus 626 ~~~ivHrDlkp~NIll~~~------~~~kl~DFGla~~ 657 (797)
...++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 4568999999999999876 7899999998863
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=90.70 E-value=0.6 Score=50.39 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=27.2
Q ss_pred CCCeEEcCCCCCceEEcCCCcEEEEeecCCcc
Q 040702 626 SVPIIHCDLKPSNVLLDDNMVAHLSDFGMAKP 657 (797)
Q Consensus 626 ~~~ivHrDlkp~NIll~~~~~~kl~DFGla~~ 657 (797)
...++|+|+.+.||+ +.++.+.++||..|..
T Consensus 261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp CEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 346899999999999 8888999999998874
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=82.12 E-value=0.43 Score=32.67 Aligned_cols=17 Identities=18% Similarity=0.217 Sum_probs=7.2
Q ss_pred HHHHHHHHHhhhhcCcc
Q 040702 469 FMMVVVLLILKYRKGRK 485 (797)
Q Consensus 469 ~~~~~~~~~~~~r~~r~ 485 (797)
++++++.++++.||++.
T Consensus 24 ~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 24 LLVVALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHhhhhHh
Confidence 33344444444444433
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=81.25 E-value=0.32 Score=33.25 Aligned_cols=19 Identities=16% Similarity=0.258 Sum_probs=8.4
Q ss_pred hHHHHHHHHHhhhhcCccc
Q 040702 468 IFMMVVVLLILKYRKGRKS 486 (797)
Q Consensus 468 ~~~~~~~~~~~~~r~~r~~ 486 (797)
+++++++.++++.||++++
T Consensus 22 ~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 22 ILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHHHhhhhhhh
Confidence 3334444444444444433
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=79.93 E-value=3.9 Score=39.23 Aligned_cols=84 Identities=8% Similarity=0.078 Sum_probs=60.6
Q ss_pred cCCceeEeeeeeecCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHH-HHHccCCCCeEEcCCCCCceE
Q 040702 562 RHRNLIKIISSCSNDDFKALVLEYMPLGSLEKCLYSGNYILDIFQGLNIMIDVASALE-YLHFGYSVPIIHCDLKPSNVL 640 (797)
Q Consensus 562 ~Hpniv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~al~-yLH~~~~~~ivHrDlkp~NIl 640 (797)
.||++ -..+-.+++.+.+.++.-+++.=...++. .+...+++++.+|+.... +++ .-+|--+.|+||+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~----~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK----TTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT----SCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh----cCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEE
Confidence 57877 44455677777777776644433333332 577888888888877666 444 4578899999999
Q ss_pred EcCCCcEEEEeecCCc
Q 040702 641 LDDNMVAHLSDFGMAK 656 (797)
Q Consensus 641 l~~~~~~kl~DFGla~ 656 (797)
+|.++.+++.-.|+-.
T Consensus 117 f~~~~~p~i~hRGi~~ 132 (219)
T 4ano_A 117 FNRALEPFFLHVGVKE 132 (219)
T ss_dssp ECTTCCEEESCCEETT
T ss_pred EeCCCcEEEEEcCCcc
Confidence 9999999998877654
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=78.23 E-value=0.51 Score=50.70 Aligned_cols=30 Identities=27% Similarity=0.352 Sum_probs=25.2
Q ss_pred CeEEcCCCCCceEE------cCCCcEEEEeecCCcc
Q 040702 628 PIIHCDLKPSNVLL------DDNMVAHLSDFGMAKP 657 (797)
Q Consensus 628 ~ivHrDlkp~NIll------~~~~~~kl~DFGla~~ 657 (797)
.++|+|+.+.||++ +++..++++||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 3456799999998863
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=73.89 E-value=2.9 Score=39.93 Aligned_cols=86 Identities=8% Similarity=0.083 Sum_probs=62.2
Q ss_pred cCCceeEeeeeeecCCeEEEEEEccCCC-CHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCceE
Q 040702 562 RHRNLIKIISSCSNDDFKALVLEYMPLG-SLEKCLYSGNYILDIFQGLNIMIDVASALEYLHFGYSVPIIHCDLKPSNVL 640 (797)
Q Consensus 562 ~Hpniv~l~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~l~~~~~~~i~~qi~~al~yLH~~~~~~ivHrDlkp~NIl 640 (797)
.||+.+.. .+-.+++.+.+.++.-+.+ +... ++ ..+...+++++.+|+....+++ .-+|--+.|+||+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEE
Confidence 57888765 5666677776766654422 2222 32 2677889999999988886666 3478899999999
Q ss_pred EcCCCcEEEEeecCCccC
Q 040702 641 LDDNMVAHLSDFGMAKPL 658 (797)
Q Consensus 641 l~~~~~~kl~DFGla~~~ 658 (797)
++.++.+++.-.|+...+
T Consensus 112 f~~~~~p~i~~RGik~~l 129 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVV 129 (215)
T ss_dssp ECTTSCEEESCCEETTTB
T ss_pred EcCCCCEEEEEccCccCC
Confidence 999999999888875533
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=71.41 E-value=3.6 Score=34.12 Aligned_cols=47 Identities=19% Similarity=0.201 Sum_probs=28.0
Q ss_pred cccccCCchhhCCCCCCEEEccCCcCcccCCccccCCCCCCeeeccCc
Q 040702 113 NFIGTIPSFIFNASKLSELGLQKNSFSGSIPNTFGNLRNLKWLGLNDN 160 (797)
Q Consensus 113 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N 160 (797)
.++.+...+|.++++|+++.|..+ ++.|...+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344455556666666666666654 44466666666666666666554
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=67.78 E-value=0.78 Score=50.22 Aligned_cols=56 Identities=11% Similarity=0.027 Sum_probs=17.1
Q ss_pred ccccccccCCcceeecc-----eEEEE------EEEEecc--CCcchhHHHHHHHhhhccCCceeEeeeeee
Q 040702 516 ENNLIGRGGFGPVYKDG-----MEVAI------KVFNLQY--GGAFKSFDIECGMMKRIRHRNLIKIISSCS 574 (797)
Q Consensus 516 ~~~~lg~G~~g~Vyk~~-----~~vAv------K~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~ 574 (797)
..+.+| ||+||+|. .+||| |..+... ......+.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345666 99999862 57888 6655432 223456888999999999999999987653
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=66.95 E-value=9 Score=31.64 Aligned_cols=45 Identities=20% Similarity=0.247 Sum_probs=20.6
Q ss_pred ccccCCccccCCCCCCEEEccCCcCcccCCCccccCCCCccEEEccC
Q 040702 65 VVGVVPTTIFNVSTLKSLYLHSNSLSGRLPSSADVRLPNLKELHLWG 111 (797)
Q Consensus 65 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~ 111 (797)
++.+...+|.++++|+.+.|-.+ ++ .|...+|.++.+|+.+.+.+
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~-~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IG-LLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SS-CCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hh-eEcHHHHhccCCccEEEEcC
Confidence 34444444555555555544432 22 34444444444444444443
No 455
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=59.10 E-value=1.5 Score=29.05 Aligned_cols=26 Identities=12% Similarity=0.341 Sum_probs=13.8
Q ss_pred ceEEEeccchhhHHHHHHHHHhhhhc
Q 040702 457 LLIGIVLPLSTIFMMVVVLLILKYRK 482 (797)
Q Consensus 457 ~~i~i~~~~~~~~~~~~~~~~~~~r~ 482 (797)
.+.++++++++++++++.+.++++||
T Consensus 12 aIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 12 EIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ceeeeehHHHHHHHHHHHHHHHHeec
Confidence 34555666555555555555555544
No 456
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=55.64 E-value=1.9 Score=29.44 Aligned_cols=6 Identities=33% Similarity=0.401 Sum_probs=2.5
Q ss_pred EEEecc
Q 040702 459 IGIVLP 464 (797)
Q Consensus 459 i~i~~~ 464 (797)
++++++
T Consensus 15 a~~vVG 20 (44)
T 2jwa_A 15 ISAVVG 20 (44)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 334444
Done!