Query 040703
Match_columns 88
No_of_seqs 129 out of 979
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 17:42:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040703.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040703hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jrn_A AT1G72930 protein; TIR 100.0 4.1E-37 1.4E-41 214.6 6.8 81 2-85 66-152 (176)
2 3ozi_A L6TR; plant TIR domain, 100.0 9.2E-37 3.1E-41 217.2 4.9 84 1-87 92-182 (204)
3 3h16_A TIR protein; bacteria T 99.7 1.4E-19 4.9E-24 121.7 -1.2 70 1-75 76-151 (154)
4 3ub2_A TOLL/interleukin-1 rece 99.3 2.3E-13 7.9E-18 91.3 -0.2 68 2-72 68-145 (146)
5 1fyx_A TOLL-like receptor 2; b 98.7 1.3E-09 4.4E-14 72.8 -0.8 39 2-40 64-110 (149)
6 2js7_A Myeloid differentiation 98.7 1.5E-09 5.3E-14 73.4 -1.0 36 2-37 75-117 (160)
7 2j67_A TOLL like receptor 10; 98.7 2E-09 6.7E-14 74.2 -0.7 34 2-35 94-134 (178)
8 1t3g_A X-linked interleukin-1 98.4 3.7E-08 1.3E-12 66.5 1.0 37 2-38 71-115 (159)
9 3j0a_A TOLL-like receptor 5; m 97.7 1.1E-05 3.7E-10 64.7 1.2 37 2-38 732-775 (844)
10 1eiw_A Hypothetical protein MT 91.2 0.2 7E-06 31.8 3.4 40 2-41 42-86 (111)
11 4a6h_A Phosphatidylinositol 4, 46.0 15 0.00052 22.7 2.6 20 60-80 101-120 (120)
12 3hyn_A Putative signal transdu 44.6 36 0.0012 23.5 4.5 50 2-51 83-136 (189)
13 2av4_A Thioredoxin-like protei 40.7 15 0.0005 24.6 2.0 28 17-47 63-91 (160)
14 2cof_A Protein KIAA1914; PH do 35.4 29 0.00099 20.1 2.6 16 60-75 84-99 (107)
15 2yry_A Pleckstrin homology dom 34.6 24 0.00081 20.6 2.1 19 60-79 103-121 (122)
16 1tu9_A Hypothetical protein PA 34.2 9.6 0.00033 23.5 0.2 41 33-78 84-126 (134)
17 1v5p_A Pleckstrin homology dom 33.3 32 0.0011 21.2 2.6 20 60-80 103-122 (126)
18 1q2j_A MU-conotoxin SMIIIA; HE 32.0 10 0.00035 18.1 0.1 12 8-19 7-18 (26)
19 3ro3_B Minsc, peptide of prote 32.0 31 0.0011 15.7 1.7 14 62-75 7-20 (22)
20 3aj4_A Pleckstrin homology dom 31.9 32 0.0011 19.9 2.4 16 60-75 94-109 (112)
21 2d9v_A Pleckstrin homology dom 31.7 28 0.00095 21.1 2.1 21 60-81 97-117 (130)
22 2coc_A FYVE, rhogef and PH dom 31.1 27 0.00092 21.3 2.0 16 60-75 89-104 (112)
23 1x1g_A Pleckstrin 2; PH domain 31.0 38 0.0013 20.0 2.6 18 60-78 107-124 (129)
24 2i5f_A Pleckstrin; PH domain, 30.6 30 0.001 19.7 2.0 16 60-75 92-107 (109)
25 1btn_A Beta-spectrin; signal t 30.1 34 0.0012 19.3 2.2 16 60-75 91-106 (106)
26 2d9y_A Pleckstrin homology dom 29.4 44 0.0015 19.2 2.7 18 60-78 92-109 (117)
27 2nrl_A Myoglobin; transport pr 27.6 12 0.0004 23.7 -0.2 41 33-78 93-134 (147)
28 1wgq_A FYVE, rhogef and PH dom 27.4 42 0.0014 19.2 2.4 16 60-75 86-101 (109)
29 1u5d_A SKAP55, SRC kinase-asso 27.2 44 0.0015 18.7 2.4 16 60-75 88-103 (108)
30 1v5u_A SBF1, SET binding facto 26.6 49 0.0017 19.0 2.6 16 60-75 94-109 (117)
31 3rcp_A Pleckstrin homology dom 26.5 48 0.0017 18.7 2.5 16 60-75 76-91 (103)
32 1v89_A Hypothetical protein KI 26.3 45 0.0016 19.0 2.4 16 60-75 95-110 (118)
33 2dhk_A TBC1 domain family memb 26.1 45 0.0015 19.7 2.4 16 60-75 87-102 (119)
34 1upq_A PEPP1; PH domain, phosp 26.0 39 0.0013 19.7 2.0 20 60-80 92-111 (123)
35 3cxb_B Pleckstrin homology dom 25.2 41 0.0014 19.9 2.0 16 60-75 84-99 (112)
36 3u43_A Colicin-E2 immunity pro 25.1 39 0.0013 20.7 1.9 16 62-82 68-83 (94)
37 2dn6_A KIAA0640 protein; PH do 24.8 50 0.0017 18.9 2.4 16 60-75 86-101 (115)
38 1unk_A Colicin E7; immunity pr 24.5 41 0.0014 20.3 1.9 16 62-82 69-84 (87)
39 1x05_A Pleckstrin; PH domain, 24.4 45 0.0015 19.7 2.1 16 60-75 103-118 (129)
40 2dkp_A Pleckstrin homology dom 24.3 51 0.0018 19.3 2.4 18 60-78 102-119 (128)
41 2cod_A Centaurin-delta 1; ARF 24.2 52 0.0018 19.0 2.4 16 60-75 82-97 (115)
42 2d9x_A Oxysterol binding prote 24.0 52 0.0018 19.3 2.4 16 60-75 87-102 (120)
43 1eaz_A Tandem PH domain contai 23.8 53 0.0018 19.1 2.4 16 60-75 94-109 (125)
44 1fgy_A GRP1; PH domain, signal 23.5 54 0.0019 19.0 2.4 16 60-75 103-118 (127)
45 1wjm_A Beta-spectrin III; PH d 23.3 55 0.0019 19.3 2.4 16 60-75 100-115 (123)
46 1dro_A Beta-spectrin; cytoskel 23.2 42 0.0014 19.9 1.8 18 60-78 102-119 (122)
47 2w2x_D 1-phosphatidylinositol- 23.1 46 0.0016 20.0 2.0 16 60-75 102-117 (124)
48 2da0_A 130-kDa phosphatidylino 23.0 57 0.0019 19.0 2.4 16 60-75 84-99 (114)
49 2y7b_A Actin-binding protein a 22.9 56 0.0019 19.3 2.4 18 60-77 111-128 (134)
50 2lul_A Tyrosine-protein kinase 22.9 53 0.0018 20.9 2.4 16 60-75 104-119 (164)
51 1v88_A Oxysterol binding prote 22.8 55 0.0019 20.2 2.4 16 60-75 107-122 (130)
52 2vhb_A Hemoglobin; heme, respi 22.8 21 0.00071 22.1 0.3 41 33-78 88-131 (146)
53 2j59_M RHO-GTPase activating p 22.7 64 0.0022 20.1 2.7 18 60-78 94-111 (168)
54 1pls_A Pleckstrin homology dom 22.6 59 0.002 18.6 2.4 16 60-75 84-99 (113)
55 1unq_A RAC-alpha serine/threon 21.8 61 0.0021 19.0 2.4 16 60-75 93-108 (125)
56 3ubc_A Hemoglobin-like flavopr 21.7 34 0.0012 20.7 1.2 41 33-78 84-127 (131)
57 2rsg_A Collagen type IV alpha- 21.3 23 0.00077 19.9 0.2 16 60-75 77-92 (94)
58 1u5f_A SRC-associated adaptor 21.1 69 0.0023 19.5 2.6 20 60-79 102-121 (148)
59 2w72_C Human hemoglobin A; iro 21.1 18 0.00063 22.4 -0.2 41 33-78 91-134 (141)
60 2zp2_A Kinase A inhibitor; KIP 20.7 74 0.0025 20.7 2.7 10 26-35 2-11 (141)
No 1
>3jrn_A AT1G72930 protein; TIR domain arabidopsis thaliana, plant protein; 2.00A {Arabidopsis thaliana}
Probab=100.00 E-value=4.1e-37 Score=214.60 Aligned_cols=81 Identities=31% Similarity=0.507 Sum_probs=77.1
Q ss_pred EEEEecCCCCCchhhHHHH-----hhc-CCCeEEEEeeecCCCcccccccchHHHHHHHHHhhccChHHHHHHHHHHHhh
Q 040703 2 LYTLPFRDSISLLSCIDTI-----CHD-PTQIVISVFYQVDPPDMRNQNGNFGDSFLKLEERLKENTEKLQSWRNALKEF 75 (88)
Q Consensus 2 ~~vifS~~Ya~S~wCLdEL-----~~~-~~~~ViPVFY~V~psdVr~q~g~fg~af~~~~~~~~~~~e~v~~Wr~AL~~v 75 (88)
.+||||+||++|.|||+|| |++ .+++||||||+|+|||||+|+|.||++|.+|+++ .+.+++++||.||++|
T Consensus 66 ~IvV~S~ny~~S~WCl~EL~~i~~~~~~~~~~ViPIfy~V~ps~Vr~q~g~fg~af~~~~~~--~~~~~~~~Wr~AL~~v 143 (176)
T 3jrn_A 66 AVVVVSENYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPNHVRWQTGVLAEQFKKHASR--EDPEKVLKWRQALTNF 143 (176)
T ss_dssp EEEEECTTTTTCHHHHHHHHHHHHHHHTTSCEEEEEECSSCHHHHHHTCTHHHHHHHHHHTT--SCHHHHHHHHHHHHHH
T ss_pred EEEEecCCcCCChhHHHHHHHHHhhhccCCCEEEEEEecCCHHHhhhccCcHHHHHHHHHhc--cCHHHHHHHHHHHHHH
Confidence 6899999999999999999 777 8999999999999999999999999999999987 4789999999999999
Q ss_pred cCCceeeeec
Q 040703 76 MPSLSGFHSL 85 (88)
Q Consensus 76 ~~~l~G~~~~ 85 (88)
|+++||++.
T Consensus 144 -a~~~G~~~~ 152 (176)
T 3jrn_A 144 -AQLSGDCSG 152 (176)
T ss_dssp -TTSCCEECC
T ss_pred -hcccceecC
Confidence 999999984
No 2
>3ozi_A L6TR; plant TIR domain, plant protein; 2.30A {Linum usitatissimum}
Probab=100.00 E-value=9.2e-37 Score=217.16 Aligned_cols=84 Identities=26% Similarity=0.578 Sum_probs=78.2
Q ss_pred CEEEEecCCCCCchhhHHHH-----hhc--CCCeEEEEeeecCCCcccccccchHHHHHHHHHhhccChHHHHHHHHHHH
Q 040703 1 VLYTLPFRDSISLLSCIDTI-----CHD--PTQIVISVFYQVDPPDMRNQNGNFGDSFLKLEERLKENTEKLQSWRNALK 73 (88)
Q Consensus 1 ~~~vifS~~Ya~S~wCLdEL-----~~~--~~~~ViPVFY~V~psdVr~q~g~fg~af~~~~~~~~~~~e~v~~Wr~AL~ 73 (88)
+.+||||+||++|.|||+|| |++ .+++||||||+|+||+||+|+|.||++|.+|++++ +.+++++||.||+
T Consensus 92 i~IvV~S~nYa~S~WCl~EL~~I~e~~~~~~~~~ViPIFY~VdPs~Vr~q~g~fg~af~~~~~~~--~~~~v~~Wr~AL~ 169 (204)
T 3ozi_A 92 IYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANKF--DGQTIQNWKDALK 169 (204)
T ss_dssp EEEEEECTTGGGCHHHHHHHHHHHHHHHHCTTSEECCEEESSCHHHHHHTCTTHHHHHHHHTTTS--CHHHHHHHHHHHH
T ss_pred EeeEEEEcccccCcHHHHHHHHHHHHHHhcCCeeeEEEEeecCHHHHHhccccHHHHHHHHHHhh--CHHHHHHHHHHHH
Confidence 36899999999999999999 664 57999999999999999999999999999999987 4789999999999
Q ss_pred hhcCCceeeeecCC
Q 040703 74 EFMPSLSGFHSLNI 87 (88)
Q Consensus 74 ~v~~~l~G~~~~~~ 87 (88)
+| |+++||++.++
T Consensus 170 ~v-a~lsG~~~~~~ 182 (204)
T 3ozi_A 170 KV-GDLKGWHIGKN 182 (204)
T ss_dssp HH-HTSCBEEECTT
T ss_pred HH-hccCceecCCC
Confidence 99 99999999875
No 3
>3h16_A TIR protein; bacteria TIR domain, signaling protein; 2.50A {Paracoccus denitrificans PD1222}
Probab=99.73 E-value=1.4e-19 Score=121.66 Aligned_cols=70 Identities=6% Similarity=0.001 Sum_probs=55.3
Q ss_pred CEEEEecCCCCCchhhHHHH-----hhc-CCCeEEEEeeecCCCcccccccchHHHHHHHHHhhccChHHHHHHHHHHHh
Q 040703 1 VLYTLPFRDSISLLSCIDTI-----CHD-PTQIVISVFYQVDPPDMRNQNGNFGDSFLKLEERLKENTEKLQSWRNALKE 74 (88)
Q Consensus 1 ~~~vifS~~Ya~S~wCLdEL-----~~~-~~~~ViPVFY~V~psdVr~q~g~fg~af~~~~~~~~~~~e~v~~Wr~AL~~ 74 (88)
++++|+|++|++|.||++|| |++ .++.||||||+|+|++||+|.|.||++|..... ...+.++-+.|.+
T Consensus 76 ~~i~v~S~~y~~S~wc~~El~~~~~~~~~~~~~iiPV~~~v~p~~v~~~~~~~~~~~~~~~~-----~~~~~~ia~~l~~ 150 (154)
T 3h16_A 76 FGIVVLSTHFFKKEWPQKELDGLFQLESSGRSRILPIWHKVSKDEVASFSPTMADKLAFNTS-----TKSVDEIVADLMA 150 (154)
T ss_dssp EEEEEEEHHHHTTCCCHHHHHHHTCCCTTSCCCEEEEEESCCTGGGTTTCCCCCSSCCEETT-----TSCHHHHHHHHHH
T ss_pred EEEEEeCcchhcChHHHHHHHHHHHHHhcCCCEEEEEEecCCHHHHhhCCccHHHHHhhhcC-----cccHHHHHHHHHH
Confidence 36899999999999999999 445 678999999999999999999999998764332 2334555555554
Q ss_pred h
Q 040703 75 F 75 (88)
Q Consensus 75 v 75 (88)
+
T Consensus 151 l 151 (154)
T 3h16_A 151 I 151 (154)
T ss_dssp H
T ss_pred H
Confidence 4
No 4
>3ub2_A TOLL/interleukin-1 receptor domain-containing ADA protein; TIR domain, TLRS adaptor, immune system; 2.40A {Homo sapiens} PDB: 3ub3_A 3ub4_A 2y92_A
Probab=99.29 E-value=2.3e-13 Score=91.30 Aligned_cols=68 Identities=13% Similarity=0.109 Sum_probs=47.7
Q ss_pred EEEEecCCCCCchhhHHHH-----hh-cCCCeEEEEeeecC----CCcccccccchHHHHHHHHHhhccChHHHHHHHHH
Q 040703 2 LYTLPFRDSISLLSCIDTI-----CH-DPTQIVISVFYQVD----PPDMRNQNGNFGDSFLKLEERLKENTEKLQSWRNA 71 (88)
Q Consensus 2 ~~vifS~~Ya~S~wCLdEL-----~~-~~~~~ViPVFY~V~----psdVr~q~g~fg~af~~~~~~~~~~~e~v~~Wr~A 71 (88)
+++|+|+||++|.||+.|| +. .....||||||+|+ |..+|....... ..++..+....+.|.+|++|
T Consensus 68 ~I~VlS~~y~~S~wc~~El~~al~~~~~~~~~vIpv~~~v~~~~lp~~Lr~~~~id~---~~~d~~f~~l~~~v~~~~~~ 144 (146)
T 3ub2_A 68 RVLLITPGFLQDPWCKYQMLQALTEAPGAEGCTIPLLSGLSRAAYPPELRFMYYVDG---RGPDGGFRQVKEAVMRYLQT 144 (146)
T ss_dssp EEEEECHHHHHCHHHHHHHHHHHHTSSSSSSEEEEEECSCCGGGSCGGGGGSCCEET---TSGGGGHHHHHHHHHHHHTT
T ss_pred EEEEECcccccCHHHHHHHHHHHHHHhhcCCcEEEEEcCCChhhCCHHHhCeeeeec---cChHhhHHHHHHHHHHHHHh
Confidence 6899999999999999999 32 22236779999999 445566543222 12334444456889999988
Q ss_pred H
Q 040703 72 L 72 (88)
Q Consensus 72 L 72 (88)
|
T Consensus 145 ~ 145 (146)
T 3ub2_A 145 L 145 (146)
T ss_dssp C
T ss_pred c
Confidence 6
No 5
>1fyx_A TOLL-like receptor 2; beta-alpha-beta fold, signaling protein; 2.80A {Homo sapiens} SCOP: c.23.2.1 PDB: 1fyw_A 1o77_A
Probab=98.69 E-value=1.3e-09 Score=72.83 Aligned_cols=39 Identities=5% Similarity=0.027 Sum_probs=31.9
Q ss_pred EEEEecCCCCCchhhHHHH------hhc-CCCeEEEEeee-cCCCcc
Q 040703 2 LYTLPFRDSISLLSCIDTI------CHD-PTQIVISVFYQ-VDPPDM 40 (88)
Q Consensus 2 ~~vifS~~Ya~S~wCLdEL------~~~-~~~~ViPVFY~-V~psdV 40 (88)
+++|+|++|++|.||+.|| +.+ .++.||||||+ +++..+
T Consensus 64 ~I~VlS~~y~~S~wc~~El~~a~~~~~~~~~~~vIpv~~~~i~~~~~ 110 (149)
T 1fyx_A 64 TVFVLSENFVKSEWXKYELDFSHFRLFDENNDAAILILLEPIEKKAI 110 (149)
T ss_dssp EEEEECHHHHHHHTHHHHSCCSCCTTCGGGTTCCEEEESSCCCTTTS
T ss_pred EEEEeCcchhccchHHHHHHHHHHHHHhcCCCEEEEEEecCCChhhc
Confidence 6899999999999999999 335 67889999996 555443
No 6
>2js7_A Myeloid differentiation primary response protein MYD88; MYD88_human, TIR domain, TOLL like receptor adaptor domain, innate immune signaling; NMR {Homo sapiens} PDB: 2z5v_A
Probab=98.67 E-value=1.5e-09 Score=73.43 Aligned_cols=36 Identities=11% Similarity=0.106 Sum_probs=30.2
Q ss_pred EEEEecCCCCCchhhHHHH-----hh-c-CCCeEEEEeeecCC
Q 040703 2 LYTLPFRDSISLLSCIDTI-----CH-D-PTQIVISVFYQVDP 37 (88)
Q Consensus 2 ~~vifS~~Ya~S~wCLdEL-----~~-~-~~~~ViPVFY~V~p 37 (88)
+++|+|++|++|.||+.|| +. + .++.||||||+.-+
T Consensus 75 ~IvVlS~~y~~S~wc~~El~~a~~~~~~~~~~~vIpV~~~~~~ 117 (160)
T 2js7_A 75 MVVVVSDDYLQSKECDFQTKFALSLSPGAHQKRLIPIKYKAMK 117 (160)
T ss_dssp EEEECCHHHHHSHHHHHHHHHHHHHCTTHHHHTEEEEESSCCC
T ss_pred EEEEECcchhcCHHHHHHHHHHHHHHHccCCCEEEEEEEcccc
Confidence 6899999999999999999 22 3 46789999998653
No 7
>2j67_A TOLL like receptor 10; TIR, IL-1, TLR10, membrane, innate immunity, immune response, leucine-rich repeat, glycoprotein, transmembrane; 2.20A {Homo sapiens} PDB: 1fyv_A
Probab=98.66 E-value=2e-09 Score=74.24 Aligned_cols=34 Identities=6% Similarity=0.001 Sum_probs=26.2
Q ss_pred EEEEecCCCCCchhhHHHH------hhc-CCCeEEEEeeec
Q 040703 2 LYTLPFRDSISLLSCIDTI------CHD-PTQIVISVFYQV 35 (88)
Q Consensus 2 ~~vifS~~Ya~S~wCLdEL------~~~-~~~~ViPVFY~V 35 (88)
+++|+|+||++|.||+.|| +.+ .++.||||||+-
T Consensus 94 ~IvVlS~~yl~S~wc~~El~~a~~~~~~~~~~~vIpV~~~~ 134 (178)
T 2j67_A 94 SIFVLSPNFVQNEWCHYEFYFAHHNLFHENSDHIILILLEP 134 (178)
T ss_dssp EEEEECHHHHHHTGGGTHHHHTTCC-------CEEEEESSC
T ss_pred EEEEecccccccchHHHHHHHHHHHHHhcCCCEEEEEEecC
Confidence 6899999999999999999 234 578899999973
No 8
>1t3g_A X-linked interleukin-1 receptor accessory protein-like 1; TIR, IL-1RAPL, IL-1R, TLR, membrane protein; 2.30A {Homo sapiens}
Probab=98.44 E-value=3.7e-08 Score=66.52 Aligned_cols=37 Identities=11% Similarity=-0.189 Sum_probs=31.2
Q ss_pred EEEEecCCCC-CchhhHHHH-----hh-c-CCCeEEEEeeecCCC
Q 040703 2 LYTLPFRDSI-SLLSCIDTI-----CH-D-PTQIVISVFYQVDPP 38 (88)
Q Consensus 2 ~~vifS~~Ya-~S~wCLdEL-----~~-~-~~~~ViPVFY~V~ps 38 (88)
+++|+|+||. +|.||+.|| ++ + .++.||||||.-.|.
T Consensus 71 ~IvVlS~~y~~~S~wc~~El~~a~~~~~~~~~~~vI~I~~~~~~~ 115 (159)
T 1t3g_A 71 LIIVMTPNYVVRRGWSIFELETRLRNMLVTGEIKVILIECSELRG 115 (159)
T ss_dssp EEEEECHHHHHTTTTHHHHHSHHHHHHHHTTSSEEEEEECSCCCS
T ss_pred EEEEEccchhhcChHHHHHHHHHHHHHHhcCCCEEEEEEeccccc
Confidence 5899999996 999999999 33 4 678999999986654
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=97.65 E-value=1.1e-05 Score=64.74 Aligned_cols=37 Identities=16% Similarity=0.192 Sum_probs=31.0
Q ss_pred EEEEecCCCCCchhhHHHH------hhc-CCCeEEEEeeecCCC
Q 040703 2 LYTLPFRDSISLLSCIDTI------CHD-PTQIVISVFYQVDPP 38 (88)
Q Consensus 2 ~~vifS~~Ya~S~wCLdEL------~~~-~~~~ViPVFY~V~ps 38 (88)
+++|+|++|+.|.||..|+ +.+ .+..||||||+--|.
T Consensus 732 ~i~vls~~~~~s~wc~~e~~~a~~~~~~~~~~~~i~i~~~~~~~ 775 (844)
T 3j0a_A 732 IVCLVSRHFLRDGWCLEAFSYAQGRCLSDLNSALIMVVVGSLSQ 775 (844)
T ss_dssp EEEEECTTHHHHTSTTHHHHHHHSCCCCSSCTTEEEEESSCCCS
T ss_pred EEEEeccccccChHHHHHHHHHHHHHHHhcCCcEEEEEeccCCh
Confidence 5889999999999999999 224 678999999985553
No 10
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=91.17 E-value=0.2 Score=31.75 Aligned_cols=40 Identities=15% Similarity=0.262 Sum_probs=28.5
Q ss_pred EEEEecCCCCCchhhHHHH-hhc-CCCeEEEEe-eecC--CCccc
Q 040703 2 LYTLPFRDSISLLSCIDTI-CHD-PTQIVISVF-YQVD--PPDMR 41 (88)
Q Consensus 2 ~~vifS~~Ya~S~wCLdEL-~~~-~~~~ViPVF-Y~V~--psdVr 41 (88)
++|+.+++-++|.||-.|+ +.+ .|..++=|. |+.+ |+.+.
T Consensus 42 vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~P~~l~ 86 (111)
T 1eiw_A 42 VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENVPPELE 86 (111)
T ss_dssp EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCCCTTHH
T ss_pred EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcCCHHHH
Confidence 4555666667999999999 666 777777776 5544 55554
No 11
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=45.98 E-value=15 Score=22.69 Aligned_cols=20 Identities=35% Similarity=0.534 Sum_probs=16.0
Q ss_pred cChHHHHHHHHHHHhhcCCce
Q 040703 60 ENTEKLQSWRNALKEFMPSLS 80 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v~~~l~ 80 (88)
++.+..++|-+||..+ ++++
T Consensus 101 ~s~~e~~~Wv~aI~~~-~~~~ 120 (120)
T 4a6h_A 101 DSYESMMSWFDNLKIL-TSTS 120 (120)
T ss_dssp SSHHHHHHHHHHHHHH-CC--
T ss_pred CCHHHHHHHHHHHHHH-hccC
Confidence 4788899999999999 7653
No 12
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=44.64 E-value=36 Score=23.46 Aligned_cols=50 Identities=16% Similarity=0.192 Sum_probs=34.8
Q ss_pred EEEEecCCCCCchhhHHHH--hhc-CCCeEEEEeeecC-CCcccccccchHHHH
Q 040703 2 LYTLPFRDSISLLSCIDTI--CHD-PTQIVISVFYQVD-PPDMRNQNGNFGDSF 51 (88)
Q Consensus 2 ~~vifS~~Ya~S~wCLdEL--~~~-~~~~ViPVFY~V~-psdVr~q~g~fg~af 51 (88)
+++++|++...|.|=..|+ ..+ .+..||=|.=+=+ .+++..-.|.|....
T Consensus 83 vIllIs~~T~~s~~v~wEIe~Ai~~~~~PII~Vy~~~~~~~~i~~~~g~~~~~~ 136 (189)
T 3hyn_A 83 IILFLSSITANSRALREEMNYGIGTKGLPVIVIYPDYDKKSDIVDSNGNFKKQI 136 (189)
T ss_dssp EEEECCTTCCCCHHHHHHHHHHTTTTCCCEEEEETTCCSGGGTBCTTSCBCHHH
T ss_pred EEEEEecCccccchhHHHHHHHHHhcCCcEEEEECCccccchhhhccccchhhH
Confidence 6889999999999999999 554 8888888873311 234444445554333
No 13
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=40.65 E-value=15 Score=24.59 Aligned_cols=28 Identities=21% Similarity=0.356 Sum_probs=15.4
Q ss_pred HHHHhhc-CCCeEEEEeeecCCCcccccccch
Q 040703 17 IDTICHD-PTQIVISVFYQVDPPDMRNQNGNF 47 (88)
Q Consensus 17 LdEL~~~-~~~~ViPVFY~V~psdVr~q~g~f 47 (88)
|+||..+ .+.++ ||+||-.++......|
T Consensus 63 leelA~e~~~~v~---f~kVDVDe~~e~a~~y 91 (160)
T 2av4_A 63 LYKVADDIKNFCV---IYLVDITEVPDFNTMY 91 (160)
T ss_dssp HHHHHHHHTTTEE---EEEEETTTCCTTTTTT
T ss_pred HHHHHHHccCCcE---EEEEECCCCHHHHHHc
Confidence 6777555 44432 6777666555444333
No 14
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=35.39 E-value=29 Score=20.06 Aligned_cols=16 Identities=19% Similarity=0.405 Sum_probs=14.4
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..++|..||..+
T Consensus 84 ~s~~e~~~Wi~al~~~ 99 (107)
T 2cof_A 84 KSSEEMGHWLGLLLSE 99 (107)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4788899999999998
No 15
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.56 E-value=24 Score=20.65 Aligned_cols=19 Identities=26% Similarity=0.534 Sum_probs=15.5
Q ss_pred cChHHHHHHHHHHHhhcCCc
Q 040703 60 ENTEKLQSWRNALKEFMPSL 79 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v~~~l 79 (88)
++.+..+.|..||..+ ..+
T Consensus 103 ~s~~e~~~Wi~al~~a-~~~ 121 (122)
T 2yry_A 103 ESPEEQEAWIQAMGEA-ARV 121 (122)
T ss_dssp SSHHHHHHHHHHHHHH-HCC
T ss_pred CCHHHHHHHHHHHHHH-Hhc
Confidence 4678899999999998 543
No 16
>1tu9_A Hypothetical protein PA3967; structural genomics, heme, hemoglobin, pseudomonas aeruginos PSI, protein structure initiative; HET: HEM; 1.20A {Pseudomonas aeruginosa} SCOP: a.1.1.2
Probab=34.17 E-value=9.6 Score=23.51 Aligned_cols=41 Identities=15% Similarity=0.263 Sum_probs=27.5
Q ss_pred eecCCCcccccccchHHHHHHHHHhhcc--ChHHHHHHHHHHHhhcCC
Q 040703 33 YQVDPPDMRNQNGNFGDSFLKLEERLKE--NTEKLQSWRNALKEFMPS 78 (88)
Q Consensus 33 Y~V~psdVr~q~g~fg~af~~~~~~~~~--~~e~v~~Wr~AL~~v~~~ 78 (88)
|+|+|.+-. .+|+++...-...++ +++....|..++..+ ++
T Consensus 84 ~gV~p~~f~----~~~~~Ll~~l~~lg~~~t~e~~~AW~~~~~~~-a~ 126 (134)
T 1tu9_A 84 LDIRPELYD----LWLDALLMAVAEHDRDCDAETRDAWRDVMGRG-IA 126 (134)
T ss_dssp TCCCTTHHH----HHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHH-HH
T ss_pred CCcCHHHHH----HHHHHHHHHHHHhcccCCHHHHHHHHHHHHHH-HH
Confidence 367776654 356666655444542 678888999999887 54
No 17
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=33.32 E-value=32 Score=21.19 Aligned_cols=20 Identities=20% Similarity=0.489 Sum_probs=16.9
Q ss_pred cChHHHHHHHHHHHhhcCCce
Q 040703 60 ENTEKLQSWRNALKEFMPSLS 80 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v~~~l~ 80 (88)
++.+..+.|.+||..+ ..+.
T Consensus 103 ~s~~e~~~Wi~al~~a-~~~~ 122 (126)
T 1v5p_A 103 NDQKDLKDWVEALNQA-SKSG 122 (126)
T ss_dssp SSHHHHHHHHHHHHHT-TTTS
T ss_pred CCHHHHHHHHHHHHHH-HhcC
Confidence 5788899999999999 7653
No 18
>1q2j_A MU-conotoxin SMIIIA; HET: PCA; NMR {Synthetic} SCOP: j.30.1.1 PDB: 2yen_A*
Probab=32.03 E-value=10 Score=18.06 Aligned_cols=12 Identities=33% Similarity=0.329 Sum_probs=8.8
Q ss_pred CCCCCchhhHHH
Q 040703 8 RDSISLLSCIDT 19 (88)
Q Consensus 8 ~~Ya~S~wCLdE 19 (88)
+|=.+|+||-|.
T Consensus 7 pngCs~rWCrdh 18 (26)
T 1q2j_A 7 RRGCSSRWCRDH 18 (26)
T ss_dssp SSCCCSSSSSSS
T ss_pred CCcccchhhccc
Confidence 566789999653
No 19
>3ro3_B Minsc, peptide of protein inscuteable homolog; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=32.02 E-value=31 Score=15.70 Aligned_cols=14 Identities=29% Similarity=0.624 Sum_probs=11.2
Q ss_pred hHHHHHHHHHHHhh
Q 040703 62 TEKLQSWRNALKEF 75 (88)
Q Consensus 62 ~e~v~~Wr~AL~~v 75 (88)
-+.|++|.+-|.-.
T Consensus 7 vDSV~rWmeDLr~M 20 (22)
T 3ro3_B 7 VDSVQRWMEDLKLM 20 (26)
T ss_pred hHHHHHHHHHHHhh
Confidence 57799999988754
No 20
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=31.94 E-value=32 Score=19.85 Aligned_cols=16 Identities=25% Similarity=0.584 Sum_probs=14.1
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|..||.++
T Consensus 94 ~s~~e~~~Wi~al~~a 109 (112)
T 3aj4_A 94 ESTDDCLAWKFTLQDS 109 (112)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4688899999999987
No 21
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=31.69 E-value=28 Score=21.11 Aligned_cols=21 Identities=29% Similarity=0.472 Sum_probs=16.9
Q ss_pred cChHHHHHHHHHHHhhcCCcee
Q 040703 60 ENTEKLQSWRNALKEFMPSLSG 81 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v~~~l~G 81 (88)
++.+..+.|.+||..+ ...+.
T Consensus 97 ~s~~e~~~Wi~al~~a-~~~~~ 117 (130)
T 2d9v_A 97 ETRDDAIAWKTALMEA-NSTPA 117 (130)
T ss_dssp SSHHHHHHHHHHHHHH-HTCCC
T ss_pred CCHHHHHHHHHHHHHH-HcCCC
Confidence 5788899999999998 65443
No 22
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=31.13 E-value=27 Score=21.28 Aligned_cols=16 Identities=25% Similarity=0.412 Sum_probs=14.4
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..++|.+||..+
T Consensus 89 ~s~e~~~~Wl~al~~A 104 (112)
T 2coc_A 89 SSAELQQQWLETLSTA 104 (112)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 5789999999999997
No 23
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=30.97 E-value=38 Score=19.98 Aligned_cols=18 Identities=22% Similarity=0.497 Sum_probs=15.4
Q ss_pred cChHHHHHHHHHHHhhcCC
Q 040703 60 ENTEKLQSWRNALKEFMPS 78 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v~~~ 78 (88)
++.+..+.|.+||..+ ..
T Consensus 107 ~s~~e~~~Wi~al~~~-~~ 124 (129)
T 1x1g_A 107 SSKAERAEWIEAIKKL-TS 124 (129)
T ss_dssp SSHHHHHHHHHHHHHH-SS
T ss_pred CCHHHHHHHHHHHHHH-Hh
Confidence 4788899999999998 54
No 24
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=30.65 E-value=30 Score=19.71 Aligned_cols=16 Identities=13% Similarity=0.335 Sum_probs=13.9
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|..||..+
T Consensus 92 ~s~~e~~~Wi~ai~~~ 107 (109)
T 2i5f_A 92 ATPKERTEWIKAIQMA 107 (109)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4678899999999987
No 25
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=30.08 E-value=34 Score=19.33 Aligned_cols=16 Identities=19% Similarity=0.603 Sum_probs=13.3
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+....|..||..+
T Consensus 91 ~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 91 KDDEEMNTWIQAISSA 106 (106)
T ss_dssp SSHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhcC
Confidence 4788899999999764
No 26
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.35 E-value=44 Score=19.18 Aligned_cols=18 Identities=28% Similarity=0.530 Sum_probs=15.3
Q ss_pred cChHHHHHHHHHHHhhcCC
Q 040703 60 ENTEKLQSWRNALKEFMPS 78 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v~~~ 78 (88)
++.+..+.|.+||..+ ..
T Consensus 92 ~s~~e~~~Wi~al~~~-~~ 109 (117)
T 2d9y_A 92 ESPEEQEAWIQAMGEA-AR 109 (117)
T ss_dssp SSHHHHHHHHHHHHHT-TC
T ss_pred CCHHHHHHHHHHHHHH-Hh
Confidence 4688899999999998 54
No 27
>2nrl_A Myoglobin; transport protein; HET: HEM; 0.91A {Thunnus atlanticus} PDB: 2nx0_A* 3qm5_A* 3qm6_A* 3qm7_A* 3qm8_A* 3qm9_A* 3qma_A* 1myt_A* 2nrm_A*
Probab=27.56 E-value=12 Score=23.65 Aligned_cols=41 Identities=7% Similarity=0.120 Sum_probs=25.9
Q ss_pred eecCCCcccccccchHHHHHHHHHhh-ccChHHHHHHHHHHHhhcCC
Q 040703 33 YQVDPPDMRNQNGNFGDSFLKLEERL-KENTEKLQSWRNALKEFMPS 78 (88)
Q Consensus 33 Y~V~psdVr~q~g~fg~af~~~~~~~-~~~~e~v~~Wr~AL~~v~~~ 78 (88)
|+|+|.+-.. +|+++...-... .-+++...-|..++..+ ++
T Consensus 93 ~~V~p~~f~~----~~~~Ll~~l~~~~~~t~e~~~AW~~~~~~v-~~ 134 (147)
T 2nrl_A 93 HKIPINNFKL----ISEVLVKVMQEKAGLDAGGQTALRNVMGII-IA 134 (147)
T ss_dssp TCCCTHHHHH----HHHHHHHHHHHHSCCCHHHHHHHHHHHHHH-HH
T ss_pred cCCCHHHHHH----HHHHHHHHHHHhccCCHHHHHHHHHHHHHH-HH
Confidence 4567765543 455555443332 12678889999999888 54
No 28
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=27.38 E-value=42 Score=19.21 Aligned_cols=16 Identities=25% Similarity=0.532 Sum_probs=14.1
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+....|.+||..+
T Consensus 86 ~s~~e~~~Wi~al~~a 101 (109)
T 1wgq_A 86 DDAHSTQRWIDAFQEG 101 (109)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4688899999999987
No 29
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=27.17 E-value=44 Score=18.73 Aligned_cols=16 Identities=6% Similarity=0.378 Sum_probs=13.9
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|..||..+
T Consensus 88 ~s~~e~~~Wi~ai~~~ 103 (108)
T 1u5d_A 88 TSPAEARDWVDQISFL 103 (108)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4678899999999987
No 30
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=26.58 E-value=49 Score=18.97 Aligned_cols=16 Identities=13% Similarity=0.474 Sum_probs=14.3
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|.+||..+
T Consensus 94 ~s~~e~~~Wi~al~~~ 109 (117)
T 1v5u_A 94 QDVPSAQQWVDRIQSC 109 (117)
T ss_dssp SSHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4688899999999988
No 31
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=26.49 E-value=48 Score=18.68 Aligned_cols=16 Identities=31% Similarity=0.345 Sum_probs=14.2
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|..||..+
T Consensus 76 ~s~~e~~~Wi~al~~a 91 (103)
T 3rcp_A 76 VNAAERQRWLVALGSS 91 (103)
T ss_dssp SSHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4788899999999988
No 32
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=26.30 E-value=45 Score=19.04 Aligned_cols=16 Identities=13% Similarity=0.520 Sum_probs=14.0
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+....|..||..+
T Consensus 95 ~s~~e~~~Wi~al~~~ 110 (118)
T 1v89_A 95 SSQAEMEEWVKFLRRV 110 (118)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4678899999999988
No 33
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.14 E-value=45 Score=19.69 Aligned_cols=16 Identities=13% Similarity=0.291 Sum_probs=14.0
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..++|..||..+
T Consensus 87 ~s~~e~~~Wi~al~~~ 102 (119)
T 2dhk_A 87 ATKQAMLYWLQQLQMK 102 (119)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4788899999999987
No 34
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=26.05 E-value=39 Score=19.68 Aligned_cols=20 Identities=25% Similarity=0.448 Sum_probs=15.4
Q ss_pred cChHHHHHHHHHHHhhcCCce
Q 040703 60 ENTEKLQSWRNALKEFMPSLS 80 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v~~~l~ 80 (88)
++.+....|..||..+ ....
T Consensus 92 ~s~~e~~~Wi~al~~a-~~~~ 111 (123)
T 1upq_A 92 DTLEDLRGWLRALGRA-SRAE 111 (123)
T ss_dssp SSHHHHHHHHHHHHHH-HC--
T ss_pred CCHHHHHHHHHHHHHH-Hhcc
Confidence 4688899999999998 5443
No 35
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=25.18 E-value=41 Score=19.91 Aligned_cols=16 Identities=19% Similarity=0.447 Sum_probs=14.2
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+.++.|..||..+
T Consensus 84 ~s~ee~~~Wi~ai~~~ 99 (112)
T 3cxb_B 84 ESEAEMAEWMQHLCQA 99 (112)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4788899999999987
No 36
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=25.07 E-value=39 Score=20.69 Aligned_cols=16 Identities=38% Similarity=0.856 Sum_probs=12.6
Q ss_pred hHHHHHHHHHHHhhcCCceee
Q 040703 62 TEKLQSWRNALKEFMPSLSGF 82 (88)
Q Consensus 62 ~e~v~~Wr~AL~~v~~~l~G~ 82 (88)
.+.|.+||.| -.++||
T Consensus 68 v~~IKeWRa~-----nG~pgF 83 (94)
T 3u43_A 68 VKEIKEWRAA-----NGKSGF 83 (94)
T ss_dssp HHHHHHHHHH-----TTCCCC
T ss_pred HHHHHHHHHH-----cCCccc
Confidence 4678999998 677775
No 37
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.84 E-value=50 Score=18.86 Aligned_cols=16 Identities=25% Similarity=0.501 Sum_probs=13.9
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|..||..+
T Consensus 86 ~s~~e~~~Wi~ai~~~ 101 (115)
T 2dn6_A 86 SDKKKKQEWIQAIHST 101 (115)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4678899999999987
No 38
>1unk_A Colicin E7; immunity protein, dimeric structure, RNAse active site; 1.80A {Escherichia coli} SCOP: a.28.2.1 PDB: 1mz8_A 1ayi_A 2jaz_A 2jb0_A 2jbg_A 7cei_A 1znv_A 1cei_A 1ujz_A 2erh_A
Probab=24.47 E-value=41 Score=20.34 Aligned_cols=16 Identities=31% Similarity=0.819 Sum_probs=12.4
Q ss_pred hHHHHHHHHHHHhhcCCceee
Q 040703 62 TEKLQSWRNALKEFMPSLSGF 82 (88)
Q Consensus 62 ~e~v~~Wr~AL~~v~~~l~G~ 82 (88)
.+.|.+||.| -.++||
T Consensus 69 v~~iKeWRa~-----nG~pgF 84 (87)
T 1unk_A 69 VKEIKEWRAA-----NGKPGF 84 (87)
T ss_dssp HHHHHHHHHH-----TTCCCC
T ss_pred HHHHHHHHHH-----cCCccc
Confidence 4678999998 667776
No 39
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=24.40 E-value=45 Score=19.70 Aligned_cols=16 Identities=13% Similarity=0.335 Sum_probs=14.3
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|..||..+
T Consensus 103 ~s~~e~~~Wi~al~~~ 118 (129)
T 1x05_A 103 ATPKERTEWIKAIQMA 118 (129)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4678899999999998
No 40
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=24.26 E-value=51 Score=19.27 Aligned_cols=18 Identities=11% Similarity=0.407 Sum_probs=15.0
Q ss_pred cChHHHHHHHHHHHhhcCC
Q 040703 60 ENTEKLQSWRNALKEFMPS 78 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v~~~ 78 (88)
++.+..+.|.+||..+ +.
T Consensus 102 ~s~~e~~~Wi~al~~a-~~ 119 (128)
T 2dkp_A 102 DTGKEMELWMKAMLDA-AL 119 (128)
T ss_dssp SSHHHHHHHHHHHHHH-HS
T ss_pred CCHHHHHHHHHHHHHH-Hh
Confidence 4688899999999887 54
No 41
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=24.24 E-value=52 Score=19.01 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=14.0
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|..||..+
T Consensus 82 ~s~~e~~~Wi~~l~~~ 97 (115)
T 2cod_A 82 EKEEERNDWISILLNA 97 (115)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4678899999999987
No 42
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.98 E-value=52 Score=19.31 Aligned_cols=16 Identities=19% Similarity=0.416 Sum_probs=14.0
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|.+||..+
T Consensus 87 ~s~~e~~~Wi~al~~~ 102 (120)
T 2d9x_A 87 TDAKERQHWVSRLQIC 102 (120)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4688899999999987
No 43
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=23.80 E-value=53 Score=19.05 Aligned_cols=16 Identities=25% Similarity=0.594 Sum_probs=14.0
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|..||..+
T Consensus 94 ~s~~e~~~W~~al~~~ 109 (125)
T 1eaz_A 94 DSPEEMHSWIKAVSGA 109 (125)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4688899999999987
No 44
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=23.49 E-value=54 Score=19.01 Aligned_cols=16 Identities=19% Similarity=0.474 Sum_probs=14.0
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|..||..+
T Consensus 103 ~s~~e~~~Wi~al~~~ 118 (127)
T 1fgy_A 103 PSPEEKEEWMKSIKAS 118 (127)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4678899999999987
No 45
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=23.28 E-value=55 Score=19.25 Aligned_cols=16 Identities=13% Similarity=0.468 Sum_probs=14.0
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+.++.|..||..+
T Consensus 100 ~s~~e~~~Wi~ai~~~ 115 (123)
T 1wjm_A 100 KDEAEMSSWLRVVNAA 115 (123)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4688899999999987
No 46
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=23.18 E-value=42 Score=19.92 Aligned_cols=18 Identities=17% Similarity=0.486 Sum_probs=15.1
Q ss_pred cChHHHHHHHHHHHhhcCC
Q 040703 60 ENTEKLQSWRNALKEFMPS 78 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v~~~ 78 (88)
++.+.++.|-.||..+ .+
T Consensus 102 ~s~~e~~~Wi~ai~~~-i~ 119 (122)
T 1dro_A 102 HDDTEMSQWVTSLKAQ-SD 119 (122)
T ss_dssp SSSHHHHHHHHHHHHH-HT
T ss_pred CCHHHHHHHHHHHHHH-HH
Confidence 4688899999999988 44
No 47
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=23.08 E-value=46 Score=20.03 Aligned_cols=16 Identities=25% Similarity=0.684 Sum_probs=14.2
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|..||.++
T Consensus 102 ~s~ee~~~Wi~ai~~a 117 (124)
T 2w2x_D 102 DKVEELFEWFQSIREI 117 (124)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4688899999999988
No 48
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.98 E-value=57 Score=19.01 Aligned_cols=16 Identities=19% Similarity=0.470 Sum_probs=13.7
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+....|..||..+
T Consensus 84 ~s~~e~~~Wi~al~~~ 99 (114)
T 2da0_A 84 EDEQDYVAWISVLTNS 99 (114)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4688899999999876
No 49
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=22.94 E-value=56 Score=19.32 Aligned_cols=18 Identities=17% Similarity=0.466 Sum_probs=14.7
Q ss_pred cChHHHHHHHHHHHhhcC
Q 040703 60 ENTEKLQSWRNALKEFMP 77 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v~~ 77 (88)
++.+....|..||..++.
T Consensus 111 ~s~~e~~~Wi~al~~~i~ 128 (134)
T 2y7b_A 111 DTKEERDLWMQKLNQVLV 128 (134)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 467889999999998733
No 50
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=22.90 E-value=53 Score=20.91 Aligned_cols=16 Identities=25% Similarity=0.385 Sum_probs=14.3
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|.+||.++
T Consensus 104 ~s~~e~~~Wi~aL~~~ 119 (164)
T 2lul_A 104 PSPQSRDLWVKKLKEE 119 (164)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4778899999999998
No 51
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=22.83 E-value=55 Score=20.20 Aligned_cols=16 Identities=19% Similarity=0.331 Sum_probs=14.3
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|.+||..+
T Consensus 107 ~s~~e~~~Wi~ai~~a 122 (130)
T 1v88_A 107 TSESDGRCWMDALELA 122 (130)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 5688899999999988
No 52
>2vhb_A Hemoglobin; heme, respiratory protein, oxygen transport; HET: HEM; 1.76A {Vitreoscilla stercoraria} SCOP: a.1.1.2 PDB: 1vhb_A* 3vhb_A* 4vhb_A*
Probab=22.77 E-value=21 Score=22.12 Aligned_cols=41 Identities=17% Similarity=0.267 Sum_probs=26.4
Q ss_pred eecCCCcccccccchHHHHHHHHHh-hc--cChHHHHHHHHHHHhhcCC
Q 040703 33 YQVDPPDMRNQNGNFGDSFLKLEER-LK--ENTEKLQSWRNALKEFMPS 78 (88)
Q Consensus 33 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~Wr~AL~~v~~~ 78 (88)
++|+|.+-. .+|+++...-.. .+ -+++....|..++..+ ++
T Consensus 88 ~gV~p~~f~----~~~~~Ll~~l~~~lg~~~t~e~~~AW~~~~~~i-~~ 131 (146)
T 2vhb_A 88 AGVAAAHYP----IVGQELLGAIKEVLGDAATDDILDAWGKAYGVI-AD 131 (146)
T ss_dssp HTCCGGGHH----HHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHH-HH
T ss_pred cCCCHHHHH----HHHHHHHHHHHHHhCccCCHHHHHHHHHHHHHH-HH
Confidence 467776654 355665554333 33 2678888999999887 54
No 53
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=22.71 E-value=64 Score=20.12 Aligned_cols=18 Identities=17% Similarity=0.569 Sum_probs=15.5
Q ss_pred cChHHHHHHHHHHHhhcCC
Q 040703 60 ENTEKLQSWRNALKEFMPS 78 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v~~~ 78 (88)
++.+....|..||..+ +.
T Consensus 94 ~s~~e~~~Wi~ai~~~-~~ 111 (168)
T 2j59_M 94 EDRDDMLAWIKTIQES-SN 111 (168)
T ss_dssp SSHHHHHHHHHHHHHH-CC
T ss_pred CCHHHHHHHHHHHHHH-Hh
Confidence 4788899999999998 64
No 54
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=22.65 E-value=59 Score=18.65 Aligned_cols=16 Identities=13% Similarity=0.312 Sum_probs=14.0
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|..||..+
T Consensus 84 ~s~~e~~~Wi~ai~~~ 99 (113)
T 1pls_A 84 AFLEERDAWVRDINKA 99 (113)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4688899999999987
No 55
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=21.75 E-value=61 Score=18.98 Aligned_cols=16 Identities=25% Similarity=0.623 Sum_probs=13.9
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+....|..||..+
T Consensus 93 ~s~~e~~~Wi~al~~~ 108 (125)
T 1unq_A 93 ETPEEREEWTTAIQTV 108 (125)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4678899999999987
No 56
>3ubc_A Hemoglobin-like flavoprotein; oxygen-bound, autoxidation, nanotemplate, langmuir-blodgett, films, oxygen transport; HET: HEM; 1.65A {Methylacidiphilum infernorum V4} PDB: 3ubv_A* 3s1i_A* 3s1j_A*
Probab=21.73 E-value=34 Score=20.72 Aligned_cols=41 Identities=22% Similarity=0.262 Sum_probs=27.3
Q ss_pred eecCCCcccccccchHHHHHHHHHh-hc--cChHHHHHHHHHHHhhcCC
Q 040703 33 YQVDPPDMRNQNGNFGDSFLKLEER-LK--ENTEKLQSWRNALKEFMPS 78 (88)
Q Consensus 33 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~Wr~AL~~v~~~ 78 (88)
|+|+|.+-. .+|+++...-.. .+ -+++...-|.+++..+ ++
T Consensus 84 ~gV~p~~f~----~~~~~Ll~~l~~~lg~~~t~e~~~AW~~~~~~v-a~ 127 (131)
T 3ubc_A 84 YGVVDSHYP----LVGDCLLKSIQEYLGQGFTEEAKAAWTKVYGIA-AQ 127 (131)
T ss_dssp TTCCTTHHH----HHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHH-HH
T ss_pred cCCCHHHHH----HHHHHHHHHHHHHhCccCCHHHHHHHHHHHHHH-HH
Confidence 567877654 456666654332 22 2678889999999887 54
No 57
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=21.28 E-value=23 Score=19.93 Aligned_cols=16 Identities=19% Similarity=0.625 Sum_probs=13.3
Q ss_pred cChHHHHHHHHHHHhh
Q 040703 60 ENTEKLQSWRNALKEF 75 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v 75 (88)
++.+..+.|.+||.++
T Consensus 77 ~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 77 QDPDHRQQWIDAIEQH 92 (94)
T ss_dssp CSSCCTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh
Confidence 4677789999999876
No 58
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=21.13 E-value=69 Score=19.52 Aligned_cols=20 Identities=20% Similarity=0.459 Sum_probs=15.1
Q ss_pred cChHHHHHHHHHHHhhcCCc
Q 040703 60 ENTEKLQSWRNALKEFMPSL 79 (88)
Q Consensus 60 ~~~e~v~~Wr~AL~~v~~~l 79 (88)
++.+..+.|..||..++..+
T Consensus 102 ~s~~e~~~Wi~al~~~i~~~ 121 (148)
T 1u5f_A 102 ASPKDAEEWVQQLKFILQDL 121 (148)
T ss_dssp SSHHHHHHHHHHHHHHCC--
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 46888999999999993333
No 59
>2w72_C Human hemoglobin A; iron, heme, glycation, transport, acetylation, phosphoprotein, packing defects, disease mutation, distal site point mutation; HET: HEM SO4; 1.07A {Homo sapiens} PDB: 1j7s_A* 1qi8_A* 1j7y_A* 1o1i_A* 2w72_A* 1bzz_A* 1c7b_A* 1j7w_A* 1o1k_A* 1o1o_A* 1y0c_A* 1ydz_A* 3ia3_B* 1ird_A* 1a00_A* 1a0u_A* 1a0z_A* 1a3n_A* 1a9w_A* 1b86_A* ...
Probab=21.07 E-value=18 Score=22.40 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=26.5
Q ss_pred eecCCCcccccccchHHHHHHHHHhh-c--cChHHHHHHHHHHHhhcCC
Q 040703 33 YQVDPPDMRNQNGNFGDSFLKLEERL-K--ENTEKLQSWRNALKEFMPS 78 (88)
Q Consensus 33 Y~V~psdVr~q~g~fg~af~~~~~~~-~--~~~e~v~~Wr~AL~~v~~~ 78 (88)
|+|+|.+-. .+|+++...-... + -+++....|..++..+ ++
T Consensus 91 ~gV~p~~f~----~~~~~Ll~~l~~~lg~~~t~e~~~AW~~~~~~i-~~ 134 (141)
T 2w72_C 91 LRVDPVNFK----LLSHCLLVTLAAHLPAEFTPAVHASLDKFLASV-ST 134 (141)
T ss_dssp TCCCTHHHH----HHHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHH-HH
T ss_pred cCCCHHHHH----HHHHHHHHHHHHHccccCCHHHHHHHHHHHHHH-HH
Confidence 466776554 3566666544332 3 2678888999999888 54
No 60
>2zp2_A Kinase A inhibitor; KIPI, histidine kinase inhibitor, ATP-binding, nucleotide- binding, protein kinase inhibitor, sporulation; 3.01A {Bacillus subtilis}
Probab=20.75 E-value=74 Score=20.71 Aligned_cols=10 Identities=30% Similarity=0.328 Sum_probs=7.8
Q ss_pred CeEEEEeeec
Q 040703 26 QIVISVFYQV 35 (88)
Q Consensus 26 ~~ViPVFY~V 35 (88)
.+.|||.|+=
T Consensus 2 ~~~IPV~Y~g 11 (141)
T 2zp2_A 2 IVEIPVCYGG 11 (141)
T ss_dssp EEEEEEEEST
T ss_pred EEEEeEEcCC
Confidence 4679999983
Done!