BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040705
(850 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4B9Y|A Chain A, Crystal Structure Of Apo Agd31b, Alpha-transglucosylase In
Glycoside Hydrolase Family 31
pdb|4B9Z|A Chain A, Crystal Structure Of Agd31b, Alpha-transglucosylase,
Complexed With Acarbose
pdb|4BA0|A Chain A, Crystal Structure Of Agd31b, Alpha-transglucosylase,
Complexed With 5f-alpha-glcf
Length = 817
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 149/699 (21%), Positives = 268/699 (38%), Gaps = 74/699 (10%)
Query: 150 IFSKKIKKTNQSYVIYNKKD---IQFETKAGYWLLFDQKTSHQIGFELKLGQPNFAXXXX 206
+F K+ K N VI + +QF+++A +L+ + F L QP A
Sbjct: 36 VFYKEHKLRNDGLVITTNQGNIRLQFKSEAAIEVLYRADSKQLPSF--ALAQPESAIKAQ 93
Query: 207 XXXXXXXXXXNLGWCWSLTRPKGFVRISSTETENQPAAELKIPIPQHREFNRVFLTYSSE 266
+ G + + + F ++E A E + + R +L+
Sbjct: 94 LTETENHLQFSGGTLTARIQKRPFAISYYRDSELLLAEESGFQVNTDKINFRFYLS---- 149
Query: 267 GNERFYGFGEQFSHMDFKGKRVPIFVQEQGIGRGDQPITFAANLVSYRAGGDWSTTYAPS 326
E+ G G++ MD +G+R P++ N Y Y
Sbjct: 150 PGEKILGGGQRILGMDRRGQRFPLY-----------------NRAHYGYSDHSGQMYFGL 192
Query: 327 PFYMTSKMRSVYLQGYDYSVFDLTRVDRVQIQIHGNSVQGR----ILHGNSPCELIEHFT 382
P M+SK + D+ + + +Q+ S GR ++ GNS LIE+FT
Sbjct: 193 PAIMSSKQYILVFDNSASGAMDIGKTESDILQLEAKS--GRSAYILVAGNSYPSLIENFT 250
Query: 383 ETIGRPPELPDWIVSGAVAGMQGGTDA-VRRVWDALRSYQVPVSAFWLQ-DWVGQRETLI 440
+ GR P P W + + ++A R ++ P+ L W G+ +
Sbjct: 251 QVTGRQPLPPRWALGSFASRFGYRSEAETRATVQKYKTEDFPLDTIVLDLYWFGK--DIK 308
Query: 441 GSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKL 500
G +W D + ++ D VK + P + S ++ +++A K
Sbjct: 309 GHMGNLDW--DKENFPTPLDMMADFKQQGVKTVLITEPFVLTSSKR-------WDDAVKA 359
Query: 501 DILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADFGEG-LP 559
L KD G+ + G++D+ + + WF + +++ + GV GW D GE +
Sbjct: 360 KALAKDPQGQPKAFELYFGNGGIIDVFSKEGSRWFSSIYKDLSKQGVAGWWGDLGEPEMH 419
Query: 560 VDAILYSGEDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDS 619
+ ++ D + HN Y WA++ ++ D+ E MRAGF S
Sbjct: 420 PEDTQHAIGDADTVHNAYGHRWAEM---LYQQQLDQF-------PELRPFIMMRAGFVGS 469
Query: 620 PKWGMLFWEGDQMVSWQANDGIKSAVVXXXXXXXXXYAFNHSDIGGYCAVNLPLIKYRRS 679
++GM+ W GD +W G+ S V + + HSD+GG+
Sbjct: 470 QRYGMIPWTGDVSRTW---GGLASQVELALQMSLLGFGYIHSDLGGFADGET------LD 520
Query: 680 EELLLRWMELNAFTTVFRTHEGNKPSFNSQFYSNQQTLSHFARFAKVYRAWKFYRIKLVK 739
+E+ +RW++ F V+R H G + + +++T + K+ Y
Sbjct: 521 KEMYIRWLQYGVFQPVYRPH-GQDHIPSEPVFQDEETKAILRPLVKLRYRMLPYIYTAAY 579
Query: 740 EASQKGLPVCRHLFLHYPDDDKVQRL--SYQQFLVGTEILVVPILDKGKKKVRVYFPVGE 797
+ + G+P+ R LF D+K L + + G +LV PI G + V + P G
Sbjct: 580 QNTLTGMPLMRPLFF---SDEKNPALIDNKTSYFWGDSLLVTPITQAGVESVSIPAPKG- 635
Query: 798 TSTWQHIWTEKIFTGQGSEAWVEAPIGYPAVFVKADSIV 836
W W + + G+ + + V VKA + +
Sbjct: 636 --VWFDFWKDTRYQTDGAPLTLPTDLHTIPVLVKAGAFM 672
>pdb|1XSI|A Chain A, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|B Chain B, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|C Chain C, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|D Chain D, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|E Chain E, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|F Chain F, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|A Chain A, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|B Chain B, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|C Chain C, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|D Chain D, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|E Chain E, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|F Chain F, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSK|A Chain A, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|B Chain B, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|C Chain C, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|D Chain D, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|E Chain E, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|F Chain F, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
Length = 778
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/603 (20%), Positives = 238/603 (39%), Gaps = 86/603 (14%)
Query: 222 WSLTRPKGFVRISSTETENQPAAELKIPIPQHREFNRVFLTYSSEGNERFYGFGEQFSHM 281
WSL + RI+ ++ +N + + + N +F E YG GE+F+ +
Sbjct: 118 WSLDFLRNGERITGSQVKNNGYVQ-----DTNNQRNYMFERLDLGVGETVYGLGERFTAL 172
Query: 282 DFKGKRVPIFVQEQGIGRGDQPITFAANLVSYRAGGDWSTTYAPSPFYMTSKMRSVYLQG 341
G+ V + ++ G Y PFYMT++ V +
Sbjct: 173 VRNGQTVETWNRDGGTST--------------------EQAYKNIPFYMTNRGYGVLVNH 212
Query: 342 YDYSVFDL--TRVDRVQIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDW----- 394
F++ +V +VQ + ++ ++ G +P +++ +T GRP P W
Sbjct: 213 PQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLW 272
Query: 395 IVSGAVAGMQGGTDAVRRVWDALRSYQVPV-----SAFWLQDWVGQRETLIGSQLWWNWE 449
+ + T V D + +P+ FW++ + W ++E
Sbjct: 273 LTTSFTTNYDEAT--VNSFIDGMAERNLPLHVFHFDCFWMKAF-----------QWCDFE 319
Query: 450 VDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNG 509
D + + +++ L A +K+ + NP + ++ +F+E ++ L+K +G
Sbjct: 320 WDPLTFPDPEGMIRRLKAKGLKICVWINPYIG-------QKSPVFKELQEKGYLLKRPDG 372
Query: 510 EQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADFGEGLPVDAILYSGED 569
+ + + D T+PD W+ L+ +V GV + DFGE +P D + G D
Sbjct: 373 SLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSD 432
Query: 570 PISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPKWGMLFWEG 629
P HN Y A I E V G EE+ V F R+ + K+ + W G
Sbjct: 433 PQKMHNHY----AYIYNELVWNVLKDTVG------EEEAVLFARSASVGAQKF-PVHWGG 481
Query: 630 DQMVSWQANDGIKSAVVXXXXXXXXXYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMEL 689
D ++++ + ++ + F DIGG+ P Y+ RW
Sbjct: 482 DCYANYES---MAESLRGGLSIGLSGFGFWSHDIGGF-ENTAPAHVYK-------RWCAF 530
Query: 690 NAFTTVFRTHEGNKPSFNSQFYSNQQTLSHFARFAKVYRAWKFYRIKLVKEASQKGLPVC 749
++ R H G+K S+ + + ++ F ++ Y + A+ +G P+
Sbjct: 531 GLLSSHSRLH-GSK-SYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMM 588
Query: 750 RHLFLHYPDDDKVQRLSYQQFLVGTEILVVPILDKGKKKVRVYFPVGETSTWQHIWTEKI 809
R + + +PDD L +Q+++G ++V P+ + V+ Y P G W H+W
Sbjct: 589 RAMMMEFPDDPACDYLD-RQYMLGDNVMVAPVFTEA-GDVQFYLPEGR---WTHLWHNDE 643
Query: 810 FTG 812
G
Sbjct: 644 LDG 646
>pdb|2F2H|A Chain A, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|B Chain B, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|C Chain C, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|D Chain D, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|E Chain E, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|F Chain F, Structure Of The Yici Thiosugar Michaelis Complex
Length = 773
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/603 (20%), Positives = 238/603 (39%), Gaps = 86/603 (14%)
Query: 222 WSLTRPKGFVRISSTETENQPAAELKIPIPQHREFNRVFLTYSSEGNERFYGFGEQFSHM 281
WSL + RI+ ++ +N + + + N +F E YG GE+F+ +
Sbjct: 118 WSLDFLRNGERITGSQVKNNGYVQ-----DTNNQRNYMFERLDLGVGETVYGLGERFTAL 172
Query: 282 DFKGKRVPIFVQEQGIGRGDQPITFAANLVSYRAGGDWSTTYAPSPFYMTSKMRSVYLQG 341
G+ V + ++ G Y PFYMT++ V +
Sbjct: 173 VRNGQTVETWNRDGGTST--------------------EQAYKNIPFYMTNRGYGVLVNH 212
Query: 342 YDYSVFDL--TRVDRVQIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDW----- 394
F++ +V +VQ + ++ ++ G +P +++ +T GRP P W
Sbjct: 213 PQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLW 272
Query: 395 IVSGAVAGMQGGTDAVRRVWDALRSYQVPV-----SAFWLQDWVGQRETLIGSQLWWNWE 449
+ + T V D + +P+ FW++ + W ++E
Sbjct: 273 LTTSFTTNYDEAT--VNSFIDGMAERNLPLHVFHFDCFWMKAF-----------QWCDFE 319
Query: 450 VDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNG 509
D + + +++ L A +K+ + NP + ++ +F+E ++ L+K +G
Sbjct: 320 WDPLTFPDPEGMIRRLKAKGLKICVWINPYIG-------QKSPVFKELQEKGYLLKRPDG 372
Query: 510 EQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADFGEGLPVDAILYSGED 569
+ + + D T+PD W+ L+ +V GV + DFGE +P D + G D
Sbjct: 373 SLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSD 432
Query: 570 PISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPKWGMLFWEG 629
P HN Y A I E V G EE+ V F R+ + K+ + W G
Sbjct: 433 PQKMHNHY----AYIYNELVWNVLKDTVG------EEEAVLFARSASVGAQKF-PVHWGG 481
Query: 630 DQMVSWQANDGIKSAVVXXXXXXXXXYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMEL 689
D ++++ + ++ + F DIGG+ P Y+ RW
Sbjct: 482 DCYANYES---MAESLRGGLSIGLSGFGFWSHDIGGF-ENTAPAHVYK-------RWCAF 530
Query: 690 NAFTTVFRTHEGNKPSFNSQFYSNQQTLSHFARFAKVYRAWKFYRIKLVKEASQKGLPVC 749
++ R H G+K S+ + + ++ F ++ Y + A+ +G P+
Sbjct: 531 GLLSSHSRLH-GSK-SYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMM 588
Query: 750 RHLFLHYPDDDKVQRLSYQQFLVGTEILVVPILDKGKKKVRVYFPVGETSTWQHIWTEKI 809
R + + +PDD L +Q+++G ++V P+ + V+ Y P G W H+W
Sbjct: 589 RAMMMEFPDDPACDYLD-RQYMLGDNVMVAPVFTEA-GDVQFYLPEGR---WTHLWHNDE 643
Query: 810 FTG 812
G
Sbjct: 644 LDG 646
>pdb|1WE5|A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|B Chain B, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|C Chain C, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|D Chain D, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|E Chain E, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|F Chain F, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
Length = 772
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 124/598 (20%), Positives = 227/598 (37%), Gaps = 76/598 (12%)
Query: 222 WSLTRPKGFVRISSTETENQPAAELKIPIPQHREFNRVFLTYSSEGNERFYGFGEQFSHM 281
WSL + RI+ ++ +N + + + N F E YG GE+F+ +
Sbjct: 118 WSLDFLRNGERITGSQVKNNGYVQ-----DTNNQRNYXFERLDLGVGETVYGLGERFTAL 172
Query: 282 DFKGKRVPIFVQEQGIGRGDQPITFAANLVSYRAGGDWSTTYAPSPFYMTSKMRSVYLQG 341
G+ V + ++ G Y PFY T++ V +
Sbjct: 173 VRNGQTVETWNRDGGTST--------------------EQAYKNIPFYXTNRGYGVLVNH 212
Query: 342 YDYSVFDL--TRVDRVQIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDW----- 394
F++ +V +VQ + ++ ++ G +P +++ +T GRP P W
Sbjct: 213 PQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLW 272
Query: 395 IVSGAVAGMQGGTDAVRRVWDALRSYQVPVSAFWLQDWVGQRETLIGSQLWWNWEVDTTR 454
+ + T V D +P+ F + + + W ++E D
Sbjct: 273 LTTSFTTNYDEAT--VNSFIDGXAERNLPLHVFHFDCFWXK------AFQWCDFEWDPLT 324
Query: 455 YKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLV 514
+ + ++ L A +K+ + NP + ++ +F+E ++ L+K +G +
Sbjct: 325 FPDPEGXIRRLKAKGLKICVWINPYIG-------QKSPVFKELQEKGYLLKRPDGSLWQW 377
Query: 515 PNTAFDVGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADFGEGLPVDAILYSGEDPISAH 574
+ + D T+PD W+ L+ +V GV + DFGE +P D + G DP H
Sbjct: 378 DKWQPGLAIYDFTNPDACKWYADKLKGLVAXGVDCFKTDFGERIPTDVQWFDGSDPQKXH 437
Query: 575 NRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVS 634
N Y A I E V G EE+ V F R+ + K+ + W GD +
Sbjct: 438 NHY----AYIYNELVWNVLKDTVG------EEEAVLFARSASVGAQKF-PVHWGGDCYAN 486
Query: 635 WQANDGIKSAVVXXXXXXXXXYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTT 694
+++ ++ + F DIGG+ P Y+ RW ++
Sbjct: 487 YES---XAESLRGGLSIGLSGFGFWSHDIGGF-ENTAPAHVYK-------RWCAFGLLSS 535
Query: 695 VFRTHEGNKPSFNSQFYSNQQTLSHFARFAKVYRAWKFYRIKLVKEASQKGLPVCRHLFL 754
R H G+K S+ + + ++ F ++ Y + A+ +G P R
Sbjct: 536 HSRLH-GSK-SYRVPWAYDDESCDVVRFFTQLKCRXXPYLYREAARANARGTPXXRAXXX 593
Query: 755 HYPDDDKVQRLSYQQFLVGTEILVVPILDKGKKKVRVYFPVGETSTWQHIWTEKIFTG 812
+PDD L +Q+ +G + V P+ + V+ Y P G W H+W G
Sbjct: 594 EFPDDPACDYLD-RQYXLGDNVXVAPVFTEA-GDVQFYLPEGR---WTHLWHNDELDG 646
>pdb|2G3M|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|B Chain B, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|C Chain C, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|D Chain D, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|E Chain E, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|F Chain F, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3N|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|B Chain B, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|C Chain C, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|D Chain D, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|E Chain E, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|F Chain F, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
Length = 693
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 146/648 (22%), Positives = 264/648 (40%), Gaps = 85/648 (13%)
Query: 238 TENQPAAELKIPIPQHREFNRVFLTYSSEGNERFYGFGEQFSHMDFKGKRVPIFVQEQGI 297
+ N+ +EL + I Q N+V + S + E G GE+ +D K KR ++ + G
Sbjct: 33 SSNKSLSELGLTIVQQG--NKVIVEKSLDLKEHIIGLGEKAFELDRKRKRYVMYNVDAGA 90
Query: 298 GRGDQ-PITFAANL-VSYRAGGDWSTTYAPSPFYMTSKMRSVYLQGYDYSVFDLTRVDRV 355
+ Q P+ + L +S + G + ++ S + ++ G L D+V
Sbjct: 91 YKKYQDPLYVSIPLFISVKDG-------VATGYFFNSASKVIFDVG-------LEEYDKV 136
Query: 356 QIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDWIVSGAVAGMQG-GTDAVRRVW 414
+ I +SV+ ++ G +++E +TE G+P P W ++ D V +
Sbjct: 137 IVTIPEDSVEFYVIEGPRIEDVLEKYTELTGKPFLPPMWAFGYMISRYSYYPQDKVVELV 196
Query: 415 DALRSYQVPVSAFWLQDWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMT 474
D ++ V+ +L + S + W R+ K+L+ +L+ +VK++T
Sbjct: 197 DIMQKEGFRVAGVFLDI------HYMDSYKLFTWH--PYRFPEPKKLIDELHKRNVKLIT 248
Query: 475 YCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASW 534
+ + N L K +I ++GE ++ D DT W
Sbjct: 249 IVDHGIRVDQ---NYSPFLSGMGKFCEI----ESGELFVGKMWPGTTVYPDFFREDTREW 301
Query: 535 FKQVLQEMVEDGVRGWMADFGE---------------GLPV----DAILYSGEDPISAHN 575
+ ++ E + GV G D E LPV D ++ + D + +
Sbjct: 302 WAGLISEWLSQGVDGIWLDMNEPTDFSRAIEIRDVLSSLPVQFRDDRLVTTFPDNVVHYL 361
Query: 576 RYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFM-RAGFRDSPKWGMLFWEGDQMVS 634
R + + R ++ T + + +F + RAG+ ++ + W GD S
Sbjct: 362 RGKRVKHEKVRNAYPLYEAMATFKGFRTSHRNEIFILSRAGYAGIQRYAFI-WTGDNTPS 420
Query: 635 WQANDGIKSAVVXXXXXXXXXYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTT 694
W D +K + F DIGG+ N I S +LL+++ L F
Sbjct: 421 W---DDLKLQLQLVLGLSISGVPFVGCDIGGFQGRNFAEID--NSMDLLVKYYALALFFP 475
Query: 695 VFRTHEGN-----KPSFNSQFYSNQQTLSHFARFAKVYRAWKF--YRIKLVKEASQKGLP 747
+R+H+ +P F +Y + V +KF Y L EAS+KG P
Sbjct: 476 FYRSHKATDGIDTEPVFLPDYYKEKVK-------EIVELRYKFLPYIYSLALEASEKGHP 528
Query: 748 VCRHLFLHYPDDDKVQRLSYQQFLVGTEILVVPILDKGKKKVRVYFPVGETSTWQHIWTE 807
V R LF + DDD + R+ +++VG +L PI+ K + ++ V P G+ W + W
Sbjct: 529 VIRPLFYEFQDDDDMYRIE-DEYMVGKYLLYAPIVSKEESRL-VTLPRGK---WYNYWNG 583
Query: 808 KIFTGQG-SEAWVEAPIGY---PAVFVKADSIV--GETFRKNLRNSDI 849
+I G+ ++ E PI + ++ D ++ GET K N++I
Sbjct: 584 EIINGKSVVKSTHELPIYLREGSIIPLEGDELIVYGETSFKRYDNAEI 631
>pdb|3L4T|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Bj2661
pdb|3L4U|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With De-O-Sulfonated Kotalanol
pdb|3L4V|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Kotalanol
pdb|3L4W|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Miglitol
pdb|3L4X|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Nr4-8
pdb|3L4Y|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Nr4-8ii
pdb|3L4Z|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Salacinol
Length = 875
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 120/572 (20%), Positives = 214/572 (37%), Gaps = 102/572 (17%)
Query: 272 YGFGE----QFSHMDFKGKRVPIFVQEQGIGRGDQPITFAANLVSYRAGGDWSTTYAPSP 327
YG GE Q+ H D K PIF R P G+ + Y
Sbjct: 178 YGLGEHVHQQYRH-DMNWKTWPIF------NRDTTP------------NGNGTNLYGAQT 218
Query: 328 FYMTSKMRS-----VYLQGYDYSVFDLTRVDRVQIQIHGNSVQGRILHGNSPCELIEHFT 382
F++ + S V+L + L + + G + + GN+P ++++ +
Sbjct: 219 FFLCLEDASGLSFGVFLMNSNAMEVVLQPAPAITYRTIGGILDFYVFLGNTPEQVVQEYL 278
Query: 383 ETIGRPPELPDWIVSGAVAGMQGGT-DAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLI 440
E IGRP W + ++ + GT D +R V + R+ Q+P D++ +R
Sbjct: 279 ELIGRPALPSYWALGFHLSRYEYGTLDNMREVVERNRAAQLPYDVQHADIDYMDERR--- 335
Query: 441 GSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKL 500
++ D+ +KG+ + + +L+ + K++ +P ++ ++ ++ ++ +
Sbjct: 336 ------DFTYDSVDFKGFPEFVNELHNNGQKLVIIVDPAIS-NNSSSSKPYGPYDRGSDM 388
Query: 501 DILVKDKNGEQYLVPNT-AFDVGMLDLTHPDTASWFKQVLQ------------------- 540
I V +G L+ D T+P+ A W+ + +
Sbjct: 389 KIWVNSSDGVTPLIGEVWPGQTVFPDYTNPNCAVWWTKEFELFHNQVEFDGIWIDMNEVS 448
Query: 541 EMVEDGVRGWMAD----------------FGEGLPVDAILYSGEDPISAHNRYPELWAQI 584
V+ V G + F + L +DA+ + G+ HN Y A
Sbjct: 449 NFVDGSVSGCSTNNLNNPPFTPRILDGYLFCKTLCMDAVQHWGKQ-YDIHNLYGYSMAVA 507
Query: 585 NREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSA 644
E K + R+ F S K+ W GD +W D ++ +
Sbjct: 508 TAE----------AAKTVFPNKRSFILTRSTFAGSGKFAA-HWLGDNTATW---DDLRWS 553
Query: 645 VVXXXXXXXXXYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTHEGN-- 702
+ DI G+ A++ P EEL RWM+L AF R H G
Sbjct: 554 IPGVLEFNLFGIPMVGPDICGF-ALDTP-------EELCRRWMQLGAFYPFSRNHNGQGY 605
Query: 703 KPSFNSQFYSNQQTLSHFARFAKVYRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKV 762
K + F ++ L+ + + Y L A +G V R L + +D+
Sbjct: 606 KDQDPASFGADSLLLNSSRHYLNIRYTLLPYLYTLFFRAHSRGDTVARPLLHEFYEDNST 665
Query: 763 QRLSYQQFLVGTEILVVPILDKGKKKVRVYFP 794
+ +QQFL G +L+ P+LD+G +KV Y P
Sbjct: 666 WDV-HQQFLWGPGLLITPVLDEGAEKVMAYVP 696
>pdb|2QLY|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|2QMJ|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
pdb|3CTT|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Casuarine
Length = 870
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 120/572 (20%), Positives = 214/572 (37%), Gaps = 102/572 (17%)
Query: 272 YGFGE----QFSHMDFKGKRVPIFVQEQGIGRGDQPITFAANLVSYRAGGDWSTTYAPSP 327
YG GE Q+ H D K PIF R P G+ + Y
Sbjct: 178 YGLGEHVHQQYRH-DMNWKTWPIF------NRDTTP------------NGNGTNLYGAQT 218
Query: 328 FYMTSKMRS-----VYLQGYDYSVFDLTRVDRVQIQIHGNSVQGRILHGNSPCELIEHFT 382
F++ + S V+L + L + + G + + GN+P ++++ +
Sbjct: 219 FFLCLEDASGLSFGVFLMNSNAMEVVLQPAPAITYRTIGGILDFYVFLGNTPEQVVQEYL 278
Query: 383 ETIGRPPELPDWIVSGAVAGMQGGT-DAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLI 440
E IGRP W + ++ + GT D +R V + R+ Q+P D++ +R
Sbjct: 279 ELIGRPALPSYWALGFHLSRYEYGTLDNMREVVERNRAAQLPYDVQHADIDYMDERR--- 335
Query: 441 GSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKL 500
++ D+ +KG+ + + +L+ + K++ +P ++ ++ ++ ++ +
Sbjct: 336 ------DFTYDSVDFKGFPEFVNELHNNGQKLVIIVDPAIS-NNSSSSKPYGPYDRGSDM 388
Query: 501 DILVKDKNGEQYLVPNT-AFDVGMLDLTHPDTASWFKQVLQ------------------- 540
I V +G L+ D T+P+ A W+ + +
Sbjct: 389 KIWVNSSDGVTPLIGEVWPGQTVFPDYTNPNCAVWWTKEFELFHNQVEFDGIWIDMNEVS 448
Query: 541 EMVEDGVRGWMAD----------------FGEGLPVDAILYSGEDPISAHNRYPELWAQI 584
V+ V G + F + L +DA+ + G+ HN Y A
Sbjct: 449 NFVDGSVSGCSTNNLNNPPFTPRILDGYLFCKTLCMDAVQHWGKQ-YDIHNLYGYSMAVA 507
Query: 585 NREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSA 644
E K + R+ F S K+ W GD +W D ++ +
Sbjct: 508 TAE----------AAKTVFPNKRSFILTRSTFAGSGKFAA-HWLGDNTATW---DDLRWS 553
Query: 645 VVXXXXXXXXXYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTHEGN-- 702
+ DI G+ A++ P EEL RWM+L AF R H G
Sbjct: 554 IPGVLEFNLFGIPMVGPDICGF-ALDTP-------EELCRRWMQLGAFYPFSRNHNGQGY 605
Query: 703 KPSFNSQFYSNQQTLSHFARFAKVYRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKV 762
K + F ++ L+ + + Y L A +G V R L + +D+
Sbjct: 606 KDQDPASFGADSLLLNSSRHYLNIRYTLLPYLYTLFFRAHSRGDTVARPLLHEFYEDNST 665
Query: 763 QRLSYQQFLVGTEILVVPILDKGKKKVRVYFP 794
+ +QQFL G +L+ P+LD+G +KV Y P
Sbjct: 666 WDV-HQQFLWGPGLLITPVLDEGAEKVMAYVP 696
>pdb|3PHA|A Chain A, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|B Chain B, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|C Chain C, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|D Chain D, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
Length = 667
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/498 (18%), Positives = 191/498 (38%), Gaps = 86/498 (17%)
Query: 346 VFDL--TRVDRVQIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDWIVSGAVAGM 403
FD+ TR+D +++ + ++ G + ++++ F IGR +P G
Sbjct: 113 TFDIGYTRMDTLKVSCENADLDIYVIEGENAYDIVKQFRRVIGRS-YIPPKFAFGFGQSR 171
Query: 404 QGGT--DAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQ 460
G T + R V R +P+ ++ D++ Q + ++ V+ + + +
Sbjct: 172 YGYTTKEDFRAVAKGYRENHIPIDMIYMDIDYM---------QDFKDFTVNEKNFPDFPE 222
Query: 461 LLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFD 520
+K++ ++++ + + K + ++EE K + K ++G ++ D
Sbjct: 223 FVKEMKDQELRLIPIIDAGV-----KVEKGYEVYEEGVKNNYFCKREDGSDFVAAVWPGD 277
Query: 521 VGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADFGEGLPVDAILYSGE------------ 568
D+ +P+ WF + +++ G+ G+ D E AI YS E
Sbjct: 278 THFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNE----PAIFYSSEGLAEAKEFAGEF 333
Query: 569 ------------------DPISAHNRYPELWAQINREFVEEWK---------DKCTGT-- 599
D +++ Y + +N + + K + G
Sbjct: 334 AKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHNLFGYNMTRAAGEAF 393
Query: 600 KREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVXXXXXXXXXYAFN 659
+R D E+ + F R+ + ++G + W GD W I + + +
Sbjct: 394 ERIDPEKRFLMFSRSSYIGMHRYGGI-WMGDNKSWWSH---ILLNLKMLPSLNMCGFMYT 449
Query: 660 HSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTH--EGNKPSFNSQFYSNQQTL 717
+D+GG+ + +LLLR++ L FT + R H EG + QF + +
Sbjct: 450 GADLGGFGD--------DTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQF----ENI 497
Query: 718 SHFARFAKV-YRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEI 776
F YR + + +K A + + L YPDD R+ Q ++G EI
Sbjct: 498 EDFRSVINARYRLVPYLYSEYMKAALNDDM-YFKPLGFVYPDDKMAIRVE-DQLMLGNEI 555
Query: 777 LVVPILDKGKKKVRVYFP 794
++ P+ ++ + VY P
Sbjct: 556 MIAPVYEQNARGRYVYLP 573
>pdb|3NUK|A Chain A, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174
pdb|3NUK|B Chain B, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174
Length = 666
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/498 (18%), Positives = 191/498 (38%), Gaps = 86/498 (17%)
Query: 346 VFDL--TRVDRVQIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDWIVSGAVAGM 403
FD+ TR+D +++ + ++ G + ++++ F IGR +P G
Sbjct: 113 TFDIGYTRMDTLKVSCENADLDIYVIEGENAYDIVKQFRRVIGRS-YIPPKFAFGFGQSR 171
Query: 404 QGGT--DAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQ 460
G T + R V R +P+ ++ D++ Q + ++ V+ + + +
Sbjct: 172 YGYTTKEDFRAVAKGYRENHIPIDMIYMDIDYM---------QDFKDFTVNEKNFPDFPE 222
Query: 461 LLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFD 520
+K++ ++++ + + K + ++EE K + K ++G ++ D
Sbjct: 223 FVKEMKDQELRLIPIIDAGV-----KVEKGYEVYEEGVKNNYFCKREDGSDFVAAVWPGD 277
Query: 521 VGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADFGEGLPVDAILYSGE------------ 568
D+ +P+ WF + +++ G+ G+ D E AI YS E
Sbjct: 278 THFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNE----PAIFYSSEGLAEAKEFAGEF 333
Query: 569 ------------------DPISAHNRYPELWAQINREFVEEWK---------DKCTGT-- 599
D +++ Y + +N + + K + G
Sbjct: 334 AKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHNLFGYNMTRAAGEAF 393
Query: 600 KREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVXXXXXXXXXYAFN 659
+R D E+ + F R+ + ++G + W GD W I + + +
Sbjct: 394 ERIDPEKRFLMFSRSSYIGMHRYGGI-WMGDNKSWWSH---ILLNLKMLPSLNMCGFMYT 449
Query: 660 HSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTH--EGNKPSFNSQFYSNQQTL 717
+D+GG+ + +LLLR++ L FT + R H EG + QF + +
Sbjct: 450 GADLGGFGD--------DTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQF----ENI 497
Query: 718 SHFARFAKV-YRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEI 776
F YR + + +K A + + L YPDD R+ Q ++G EI
Sbjct: 498 EDFRSVINARYRLVPYLYSEYMKAALNDDM-YFKPLGFVYPDDKMAIRVE-DQLMLGNEI 555
Query: 777 LVVPILDKGKKKVRVYFP 794
++ P+ ++ + VY P
Sbjct: 556 MIAPVYEQNARGRYVYLP 573
>pdb|3M46|A Chain A, The Crystal Structure Of The D73a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3M46|B Chain B, The Crystal Structure Of The D73a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
Length = 666
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/498 (18%), Positives = 191/498 (38%), Gaps = 86/498 (17%)
Query: 346 VFDL--TRVDRVQIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDWIVSGAVAGM 403
FD+ TR+D +++ + ++ G + ++++ F IGR +P G
Sbjct: 113 TFDIGYTRMDTLKVSCENADLDIYVIEGENAYDIVKQFRRVIGRS-YIPPKFAFGFGQSR 171
Query: 404 QGGT--DAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQ 460
G T + R V R +P+ ++ D++ Q + ++ V+ + + +
Sbjct: 172 WGYTTKEDFRAVAKGYRENHIPIDMIYMDIDYM---------QDFKDFTVNEKNFPDFPE 222
Query: 461 LLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFD 520
+K++ ++++ + + K + ++EE K + K ++G ++ D
Sbjct: 223 FVKEMKDQELRLIPIIDAGV-----KVEKGYEVYEEGVKNNYFCKREDGSDFVAAVWPGD 277
Query: 521 VGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADFGEGLPVDAILYSGE------------ 568
D+ +P+ WF + +++ G+ G+ D E AI YS E
Sbjct: 278 THFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNE----PAIFYSSEGLAEAKEFAGEF 333
Query: 569 ------------------DPISAHNRYPELWAQINREFVEEWK---------DKCTGT-- 599
D +++ Y + +N + + K + G
Sbjct: 334 AKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHNLFGYNMTRAAGEAF 393
Query: 600 KREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVXXXXXXXXXYAFN 659
+R D E+ + F R+ + ++G + W GD W I + + +
Sbjct: 394 ERIDPEKRFLMFSRSSYIGMHRYGGI-WMGDNKSWWSH---ILLNLKMLPSLNMCGFMYT 449
Query: 660 HSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTH--EGNKPSFNSQFYSNQQTL 717
+D+GG+ + +LLLR++ L FT + R H EG + QF + +
Sbjct: 450 GADLGGFGD--------DTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQF----ENI 497
Query: 718 SHFARFAKV-YRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEI 776
F YR + + +K A + + L YPDD R+ Q ++G EI
Sbjct: 498 EDFRSVINARYRLVPYLYSEYMKAALNDDM-YFKPLGFVYPDDKMAIRVE-DQLMLGNEI 555
Query: 777 LVVPILDKGKKKVRVYFP 794
++ P+ ++ + VY P
Sbjct: 556 MIAPVYEQNARGRYVYLP 573
>pdb|3M6D|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3M6D|B Chain B, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3MKK|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
In Complex With Isomaltose
pdb|3MKK|B Chain B, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
In Complex With Isomaltose
pdb|3POC|A Chain A, The Crystal Structure Of The D307a Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3POC|B Chain B, The Crystal Structure Of The D307a Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
Length = 666
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/498 (18%), Positives = 190/498 (38%), Gaps = 86/498 (17%)
Query: 346 VFDL--TRVDRVQIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDWIVSGAVAGM 403
FD+ TR+D +++ + ++ G + ++++ F IGR +P G
Sbjct: 113 TFDIGYTRMDTLKVSCENADLDIYVIEGENAYDIVKQFRRVIGRS-YIPPKFAFGFGQSR 171
Query: 404 QGGT--DAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQ 460
G T + R V R +P+ ++ D++ Q + ++ V+ + + +
Sbjct: 172 WGYTTKEDFRAVAKGYRENHIPIDMIYMDIDYM---------QDFKDFTVNEKNFPDFPE 222
Query: 461 LLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFD 520
+K++ ++++ + + K + ++EE K + K ++G ++ D
Sbjct: 223 FVKEMKDQELRLIPIIDAGV-----KVEKGYEVYEEGVKNNYFCKREDGSDFVAAVWPGD 277
Query: 521 VGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADFGEGLPVDAILYSGE------------ 568
D+ +P+ WF + +++ G+ G F + AI YS E
Sbjct: 278 THFPDMLNPEARKWFGDKYRFLIDQGIEG----FWNAMNEPAIFYSSEGLAEAKEFAGEF 333
Query: 569 ------------------DPISAHNRYPELWAQINREFVEEWK---------DKCTGT-- 599
D +++ Y + +N + + K + G
Sbjct: 334 AKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHNLFGYNMTRAAGEAF 393
Query: 600 KREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVXXXXXXXXXYAFN 659
+R D E+ + F R+ + ++G + W GD W I + + +
Sbjct: 394 ERIDPEKRFLMFSRSSYIGMHRYGGI-WMGDNKSWWSH---ILLNLKMLPSLNMCGFMYT 449
Query: 660 HSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTH--EGNKPSFNSQFYSNQQTL 717
+D+GG+ + +LLLR++ L FT + R H EG + QF + +
Sbjct: 450 GADLGGFGD--------DTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQF----ENI 497
Query: 718 SHFARFAKV-YRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEI 776
F YR + + +K A + + L YPDD R+ Q ++G EI
Sbjct: 498 EDFRSVINARYRLVPYLYSEYMKAALNDDM-YFKPLGFVYPDDKMAIRVE-DQLMLGNEI 555
Query: 777 LVVPILDKGKKKVRVYFP 794
++ P+ ++ + VY P
Sbjct: 556 MIAPVYEQNARGRYVYLP 573
>pdb|2XVG|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
Cellvibrio Japonicus
pdb|2XVK|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
Cellvibrio Japonicus In Complex With
5-Fluoro-Alpha-D-Xylopyranosyl Fluoride
pdb|2XVL|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
Cellvibrio Japonicus In Complex With Pentaerythritol
Propoxylate (5 4 Po Oh)
Length = 1020
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 108/502 (21%), Positives = 194/502 (38%), Gaps = 53/502 (10%)
Query: 361 GNSVQGRILHGNSPCELIEHFTETIGRPPELPDWIVSGAVAGMQ-GGTDAVRRVWDALRS 419
G ++ + G++ ++I + + G+ LP W + + +D + + R
Sbjct: 400 GKAIDYYFVAGDTKDDIISGYRQLTGKSVMLPKWAYGFWQSRERYKSSDEIIQNLKEYRD 459
Query: 420 YQVPVSAFWLQDWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPC 479
++P+ L DW E GS + D + K L+ ++A + ++M P
Sbjct: 460 RKIPIDNIVL-DWSYWPEDAWGSH-----DFDKQFFPDPKALVDKVHAMNAQIMISVWPK 513
Query: 480 LAPS---HEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFK 536
P+ +++ N + +F + LD D G+ YL N +D + TA ++K
Sbjct: 514 FYPTTDNYKELNAKGFMFN--RNLDEKNLDWIGKGYL--NAFYD----PFSPEATAIFWK 565
Query: 537 QVLQEMVEDGVRGWMADFGEGLPVDAILYSGEDPISAHNRYPELWAQINREFVEEWKDKC 596
Q+ ++ G W D E + + + N N V +
Sbjct: 566 QIRDKINVHGFDAWWLDAVEPDIHSNLTFEKRKWLMTPNARGNGAEIFNAYAVPHAEGVY 625
Query: 597 TGTKREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVXXXXXXXXXY 656
G D ++ R+GF + G W GD + W +A + +
Sbjct: 626 QGELATDGDKRSFILTRSGFGGIQRTGSAIWSGDIVSRWSDMKDQIAAGIGTNLAGVTNW 685
Query: 657 AFNHSDIGGYCAVNLPLIKYRRS-------------------EELLLRWMELNAFTTVFR 697
F DIGG+ P ++R +EL RW + AF ++R
Sbjct: 686 TF---DIGGFT----PEDRFRHGKKGFVGSWTALDAEQVDEWQELNTRWYQFGAFVPLYR 738
Query: 698 THEGNKPSFNSQFYSNQQTLSHFAR--FAKVYRAWKFYRIKLVKEASQKGLPVCRHLFLH 755
+H G P +++ T + A + K+ Y L + K + R L +
Sbjct: 739 SH-GQNPYREIFNIADEGTEVYNAMVWYTKLRYYLMPYIYTLGGDTYHKDGTIMRGLVMD 797
Query: 756 YPDDDKVQRLSYQQFLVGTEILVVPILDKGKKKVRVYFPVGETSTWQHIWT-EKIFTGQG 814
+P+D K ++ Q++ G LV P+ + + VY P G S W + +T EK+ GQ
Sbjct: 798 FPNDRKAWDIN-TQYMFGPAFLVNPVYEYKARSRDVYLPAG--SDWYNFYTGEKLAGGQT 854
Query: 815 SEAWVEAPIGYPAVFVKADSIV 836
A +AP+ +FVKA +IV
Sbjct: 855 ITA--DAPLARVPLFVKAGAIV 874
>pdb|3NSX|A Chain A, The Crystal Structure Of The The Crystal Structure Of The
D420a Mutant Of The Alpha-Glucosidase (Family 31) From
Ruminococcus Obeum Atcc 29174
pdb|3NSX|B Chain B, The Crystal Structure Of The The Crystal Structure Of The
D420a Mutant Of The Alpha-Glucosidase (Family 31) From
Ruminococcus Obeum Atcc 29174
Length = 666
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/498 (18%), Positives = 190/498 (38%), Gaps = 86/498 (17%)
Query: 346 VFDL--TRVDRVQIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDWIVSGAVAGM 403
FD+ TR+D +++ + ++ G + ++++ F IGR +P G
Sbjct: 113 TFDIGYTRMDTLKVSCENADLDIYVIEGENAYDIVKQFRRVIGRS-YIPPKFAFGFGQSR 171
Query: 404 QGGT--DAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQ 460
G T + R V R +P+ ++ D++ Q + ++ V+ + + +
Sbjct: 172 WGYTTKEDFRAVAKGYRENHIPIDMIYMDIDYM---------QDFKDFTVNEKNFPDFPE 222
Query: 461 LLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFD 520
+K++ ++++ + + K + ++EE K + K ++G ++ D
Sbjct: 223 FVKEMKDQELRLIPIIDAGV-----KVEKGYEVYEEGVKNNYFCKREDGSDFVAAVWPGD 277
Query: 521 VGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADFGEGLPVDAILYSGE------------ 568
D+ +P+ WF + +++ G+ G+ D E AI YS E
Sbjct: 278 THFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNE----PAIFYSSEGLAEAKEFAGEF 333
Query: 569 ------------------DPISAHNRYPELWAQINREFVEEWK---------DKCTGT-- 599
D +++ Y + +N + + K + G
Sbjct: 334 AKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHNLFGYNMTRAAGEAF 393
Query: 600 KREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVXXXXXXXXXYAFN 659
+R D E+ + F R+ + ++G + W G W I + + +
Sbjct: 394 ERIDPEKRFLMFSRSSYIGMHRYGGI-WMGANKSWWSH---ILLNLKMLPSLNMCGFMYT 449
Query: 660 HSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTH--EGNKPSFNSQFYSNQQTL 717
+D+GG+ + +LLLR++ L FT + R H EG + QF + +
Sbjct: 450 GADLGGFGD--------DTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQF----ENI 497
Query: 718 SHFARFAKV-YRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEI 776
F YR + + +K A + + L YPDD R+ Q ++G EI
Sbjct: 498 EDFRSVINARYRLVPYLYSEYMKAALNDDM-YFKPLGFVYPDDKMAIRVE-DQLMLGNEI 555
Query: 777 LVVPILDKGKKKVRVYFP 794
++ P+ ++ + VY P
Sbjct: 556 MIAPVYEQNARGRYVYLP 573
>pdb|3TON|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|3TON|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|3TOP|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
pdb|3TOP|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
Length = 908
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 601 REDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVXXXXXXXXXYAFNH 660
+E T + V R+ F S +W W GD +W D +K +++ ++
Sbjct: 547 QEVTGQRGVVITRSTFPSSGRWAG-HWLGDNTAAW---DQLKKSIIGMMEFSLFGISYTG 602
Query: 661 SDIGGYCAVNLPLIKYRRSE-ELLLRWMELNAFTTVFRTHEGNKPSFNSQFYSNQQTLSH 719
+DI G+ ++ +E E+ +RWM+L AF R H N+ Q +S
Sbjct: 603 ADICGF---------FQDAEYEMCVRWMQLGAFYPFSRNH-------NTIGTRRQDPVSW 646
Query: 720 FARFAKVYRA-------WKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLV 772
F + R Y L+ +A +G+ V R L LH D+V QFL+
Sbjct: 647 DVAFVNISRTVLQTRYTLLPYLYTLMHKAHTEGVTVVRPL-LHEFVSDQVTWDIDSQFLL 705
Query: 773 GTEILVVPILDKGKKKVRVYFPVGETSTWQHIWTEKIFTGQGSEAWVEAPIGYPAVFVKA 832
G LV P+L++ + V YFP + W +T +G + AP+ + + V+
Sbjct: 706 GPAFLVSPVLERNARNVTAYFP---RARWYDYYTGVDINARGEWKTLPAPLDHINLHVRG 762
Query: 833 DSIV 836
I+
Sbjct: 763 GYIL 766
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 58/319 (18%), Positives = 120/319 (37%), Gaps = 58/319 (18%)
Query: 256 FNRVFLTYSSEGNERF-YGFGEQFSHMDFKGKRVPIFVQEQGIGRGDQPITFAANLVSYR 314
F+ +F+ S+ ++ YGFGE + + R + G+ DQP + N
Sbjct: 164 FSDMFIRISTRLPSKYLYGFGET----EHRSYRRDLEWHTWGMFSRDQPPGYKKN----- 214
Query: 315 AGGDWSTTYAPSPFYM----TSKMRSVYLQGYDYSVFDLTRVDRVQIQIHGNSVQGRILH 370
+Y P+YM V L + + + + G + +
Sbjct: 215 -------SYGVHPYYMGLEEDGSAHGVLLLNSNAMDVTFQPLPALTYRTTGGVLDFYVFL 267
Query: 371 GNSPCELIEHFTETIGRPPELPDWIVSGAVA--GMQGGTDAVRRVWDALRSYQVPVSAFW 428
G +P + + +TE IGRP +P W + + G Q ++ + ++D + + Q+P +
Sbjct: 268 GPTPELVTQQYTELIGRPVMVPYWSLGFQLCRYGYQNDSE-IASLYDEMVAAQIPYDVQY 326
Query: 429 LQDWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPN 488
+ E + L + ++ G+ L+ + A ++V+ +P ++ + +P
Sbjct: 327 SD--IDYMERQLDFTL-------SPKFAGFPALINRMKADGMRVILILDPAISGNETQP- 376
Query: 489 RRRNLFEEAKKLDILVKDKNGEQY-----------LVPNTAFD-----------VGMLDL 526
F + D+ +K N +V N + D V D
Sbjct: 377 --YPAFTRGVEDDVFIKYPNDGDIVWGKVWPDFPDVVVNGSLDWDSQVELYRAYVAFPDF 434
Query: 527 THPDTASWFKQVLQEMVED 545
TA W+K+ ++E+ +
Sbjct: 435 FRNSTAKWWKREIEELYNN 453
>pdb|3N04|A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31)
From Ruminococcus Obeum Atcc 29174
pdb|3N04|B Chain B, The Crystal Structure Of The Alpha-Glucosidase (Family 31)
From Ruminococcus Obeum Atcc 29174
Length = 666
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 117/608 (19%), Positives = 222/608 (36%), Gaps = 105/608 (17%)
Query: 238 TENQPAAELKIPIPQHREFNRVFLTYSSEGNERFYGFGEQFSHMDFKGKRVPIFVQEQGI 297
TE AE P + + TY + ++ YG GE ++ KR ++
Sbjct: 20 TEKIETAEEAFPYGEISQKEGFAFTYIXDEDDIVYGLGESNRGIN---KRGYCYISNCT- 75
Query: 298 GRGDQPITFAANLVSYRAGGDWSTTYAPSPFYMTSKMRSVYLQGYDYS---VFDL--TRV 352
D PI D + Y F + S ++ + +DY FD+ TR
Sbjct: 76 ---DDPIHTE----------DKRSLYGAHNFIIVSG-KTTFGLFFDYPSKLTFDIGYTRX 121
Query: 353 DRVQIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDWIVSGAVAGMQGGT--DAV 410
D +++ + ++ G + ++++ F IGR +P G G T +
Sbjct: 122 DTLKVSCENADLDIYVIEGENAYDIVKQFRRVIGRS-YIPPKFAFGFGQSRWGYTTKEDF 180
Query: 411 RRVWDALRSYQVPVSAFWLQDWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHV 470
R V R +P+ + Q + ++ V+ + + + +K+ +
Sbjct: 181 RAVAKGYRENHIPIDX--------IYXDIDYXQDFKDFTVNEKNFPDFPEFVKEXKDQEL 232
Query: 471 KVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPD 530
+++ + + K + ++EE K + K ++G ++ D D +P+
Sbjct: 233 RLIPIIDAGV-----KVEKGYEVYEEGVKNNYFCKREDGSDFVAAVWPGDTHFPDXLNPE 287
Query: 531 TASWFKQVLQEMVEDGVRGWMADFGEGLPVDAILYSGE---------------------- 568
WF + +++ G+ G+ D E AI YS E
Sbjct: 288 ARKWFGDKYRFLIDQGIEGFWNDXNE----PAIFYSSEGLAEAKEFAGEFAKDTEGKIHP 343
Query: 569 --------DPISAHNRYPELWAQINREFVEEWK---------DKCTGT--KREDTEEDLV 609
D +++ Y + +N + + K + G +R D E+ +
Sbjct: 344 WAXQAKXKDIVNSPEDYKRFYHNVNGKKIRHDKVHNLFGYNXTRAAGEAFERIDPEKRFL 403
Query: 610 FFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVXXXXXXXXXYAFNHSDIGGYCAV 669
F R+ + ++G + W GD W I + + + +D+GG+
Sbjct: 404 XFSRSSYIGXHRYGGI-WXGDNKSWWSH---ILLNLKXLPSLNXCGFXYTGADLGGFGD- 458
Query: 670 NLPLIKYRRSEELLLRWMELNAFTTVFRTH--EGNKPSFNSQFYSNQQTLSHF-ARFAKV 726
+ +LLLR++ L FT + R H EG + QF + + S AR+ V
Sbjct: 459 -------DTTRDLLLRFLALGVFTPLXRDHAAEGTREQECYQFENIEDFRSVINARYRLV 511
Query: 727 YRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEILVVPILDKGK 786
+ Y +A+ + L YPDD R+ Q +G EI + P+ ++
Sbjct: 512 PYLYSEY-----XKAALNDDXYFKPLGFVYPDDKXAIRVE-DQLXLGNEIXIAPVYEQNA 565
Query: 787 KKVRVYFP 794
+ VY P
Sbjct: 566 RGRYVYLP 573
>pdb|3LPO|A Chain A, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPO|B Chain B, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPO|C Chain C, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPO|D Chain D, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPP|A Chain A, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
pdb|3LPP|B Chain B, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
pdb|3LPP|C Chain C, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
pdb|3LPP|D Chain D, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
Length = 898
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 112/574 (19%), Positives = 205/574 (35%), Gaps = 97/574 (16%)
Query: 268 NERFYGFGEQ----FSHMDFKGKRVPIFVQEQGIGRGDQPITFAANLVSYRAGGDWSTTY 323
++ YG GEQ F H D K PIF ++Q G + + Y
Sbjct: 202 SDYIYGIGEQVHKRFRH-DLSWKTWPIFTRDQLPGDNNNNL------------------Y 242
Query: 324 APSPFYM-----TSKMRSVYLQGYDYSVFDLTRVDRVQIQIHGNSVQGRILHGNSPCELI 378
F+M + K V+L + + V ++ G + IL G++P +++
Sbjct: 243 GHQTFFMCIEDTSGKSFGVFLMNSNAMEIFIQPTPIVTYRVTGGILDFYILLGDTPEQVV 302
Query: 379 EHFTETIGRPPELPDWIVSGAVA-----GMQGGTDAVRRVWDALRSYQVPVSAFWLQDWV 433
+ + + +G P W + ++ + + VRR +A + V+ D++
Sbjct: 303 QQYQQLVGLPAMPAYWNLGFQLSRWNYKSLDVVKEVVRRNREAGIPFDTQVTDI---DYM 359
Query: 434 GQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNL 493
++ ++ D + G Q ++DL+ H K + +P ++
Sbjct: 360 EDKK---------DFTYDQVAFNGLPQFVQDLHDHGQKYVIILDPAISIGRRANGTTYAT 410
Query: 494 FEEAKKLDILVKDKNGEQYLVPNTAFDVGML-DLTHPDTASWFKQVL----QEMVEDG-- 546
+E + + + +G ++ + + D T+P+ W+ QE+ DG
Sbjct: 411 YERGNTQHVWINESDGSTPIIGEVWPGLTVYPDFTNPNCIDWWANECSIFHQEVQYDGLW 470
Query: 547 -----VRGWMADFGEGLPVDAILYSGEDP-ISAHNRYPELWAQINREFVEEWKDK----- 595
V ++ +G V+ + Y P I Y + I + V+ W +
Sbjct: 471 IDMNEVSSFIQGSTKGCNVNKLNYPPFTPDILDKLMYSK---TICMDAVQNWGKQYDVHS 527
Query: 596 CTGTKREDTEEDLV----------FFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAV 645
G E V R+ F S + W GD SW+ ++ ++
Sbjct: 528 LYGYSMAIATEQAVQKVFPNKRSFILTRSTFAGSGRHAA-HWLGDNTASWEQ---MEWSI 583
Query: 646 VXXXXXXXXXYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTH-----E 700
+DI G+ A +EEL RWM+L AF R H E
Sbjct: 584 TGMLEFSLFGIPLVGADICGFVA--------ETTEELCRRWMQLGAFYPFSRNHNSDGYE 635
Query: 701 GNKPSFNSQFYSNQQTLSHFARFAKVYRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDD 760
P+F F N + ++ + + L +A G V R + LH +D
Sbjct: 636 HQDPAF---FGQNSLLVKSSRQYLTIRYTLLPFLYTLFYKAHVFGETVARPV-LHEFYED 691
Query: 761 KVQRLSYQQFLVGTEILVVPILDKGKKKVRVYFP 794
+ +FL G +L+ P+L +G V Y P
Sbjct: 692 TNSWIEDTEFLWGPALLITPVLKQGADTVSAYIP 725
>pdb|1PNE|A Chain A, Crystallization And Structure Determination Of Bovine
Profilin At 2.0 Angstroms Resolution
pdb|2BTF|P Chain P, The Structure Of Crystalline Profilin-Beta-Actin
pdb|1HLU|P Chain P, Structure Of Bovine Beta-Actin-Profilin Complex With Actin
Bound Atp Phosphates Solvent Accessible
pdb|3U4L|P Chain P, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4
A
pdb|3UB5|P Chain P, Profilin:actin With A Wide Open Nucleotide Cleft
Length = 140
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 70 KPARPLWSSIPGKAFVSAALAET--LVEESRGSFVIKDRHIHLLCQDQTIDDIRVINDQF 127
K + +W+++PGK FV+ AE LV + R SF + L Q VI D
Sbjct: 26 KDSPSVWAAVPGKTFVNITPAEVGILVGKDRSSFFVNG----LTLGGQ---KCSVIRDSL 78
Query: 128 HFDGPFTL 135
DG FT+
Sbjct: 79 LQDGEFTM 86
>pdb|1PFL|A Chain A, Refined Solution Structure Of Human Profilin I
Length = 139
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 70 KPARPLWSSIPGKAFVSAALAE--TLVEESRGSFVIKDRHIHLLCQDQTIDDIRVINDQF 127
K + +W+++PGK FV+ AE LV + R SF + + L Q VI D
Sbjct: 25 KDSPSVWAAVPGKTFVNITPAEVGVLVGKDRSSFYV--NGLTLGGQ-----KCSVIRDSL 77
Query: 128 HFDGPFTLHQNVQFPLVLITGW--IFSKKIKKTNQSYVIYNKKD 169
DG F++ + TG F+ + KT+++ V+ K+
Sbjct: 78 LQDGEFSMDLRTKS-----TGGAPTFNVTVTKTDKTLVLLMGKE 116
>pdb|3NNN|A Chain A, Bef3 Activated Drrd Receiver Domain
pdb|3NNN|B Chain B, Bef3 Activated Drrd Receiver Domain
Length = 122
Score = 31.2 bits (69), Expect = 2.7, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 492 NLFEEAKKLDILVKD--KNGEQ--YLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVEDGV 547
+L EA K ++ D +GE+ Y+ N FDV +LD+ P W ++L+ M E GV
Sbjct: 16 DLITEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHDGW--EILKSMRESGV 73
>pdb|1CJF|A Chain A, Profilin Binds Proline-Rich Ligands In Two Distinct Amide
Backbone Orientations
pdb|1CJF|B Chain B, Profilin Binds Proline-Rich Ligands In Two Distinct Amide
Backbone Orientations
pdb|1FIK|A Chain A, Human Platelet Profilin I Crystallized In Low Salt
pdb|1FIL|A Chain A, Human Platelet Profilin I Crystallized In High Salt Actin-
Binding Protein
pdb|2PAV|P Chain P, Ternary Complex Of Profilin-Actin With The Last Poly-Pro
Of Human Vasp
pdb|2PBD|P Chain P, Ternary Complex Of Profilin-Actin With The Poly-Pro-Gab
Domain Of Vasp
pdb|3CHW|P Chain P, Complex Of Dictyostelium Discoideum Actin With Profilin
And The Last Poly-Pro Of Human Vasp
Length = 139
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 70 KPARPLWSSIPGKAFVSAALAE--TLVEESRGSFVIKDRHIHLLCQDQTIDDIRVINDQF 127
K + +W+++PGK FV+ AE LV + R SF + + L Q VI D
Sbjct: 25 KDSPSVWAAVPGKTFVNITPAEVGVLVGKDRSSFYV--NGLTLGGQ-----KCSVIRDSL 77
Query: 128 HFDGPFTLHQNVQFPLVLITGW--IFSKKIKKTNQSYVIYNKKD 169
DG F++ + TG F+ + KT+++ V+ K+
Sbjct: 78 LQDGEFSMDLRTKS-----TGGAPTFNVTVTKTDKTLVLLMGKE 116
>pdb|1CF0|A Chain A, Human Platelet Profilin Complexed With An L-Pro10-
Iodotyrosine Peptide
pdb|1CF0|B Chain B, Human Platelet Profilin Complexed With An L-Pro10-
Iodotyrosine Peptide
pdb|1AWI|A Chain A, Human Platelet Profilin Complexed With The L-Pro10 Peptide
pdb|1AWI|B Chain B, Human Platelet Profilin Complexed With The L-Pro10 Peptide
Length = 138
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 70 KPARPLWSSIPGKAFVSAALAE--TLVEESRGSFVIKDRHIHLLCQDQTIDDIRVINDQF 127
K + +W+++PGK FV+ AE LV + R SF + + L Q VI D
Sbjct: 24 KDSPSVWAAVPGKTFVNITPAEVGVLVGKDRSSFYV--NGLTLGGQ-----KCSVIRDSL 76
Query: 128 HFDGPFTLHQNVQFPLVLITGW--IFSKKIKKTNQSYVIYNKKD 169
DG F++ + TG F+ + KT+++ V+ K+
Sbjct: 77 LQDGEFSMDLRTKS-----TGGAPTFNVTVTKTDKTLVLLMGKE 115
>pdb|1GV3|A Chain A, The 2.0 Angstrom Resolution Structure Of The Catalytic
Portion Of A Cyanobacterial Membrane-Bound Manganese
Superoxide Dismutase
pdb|1GV3|B Chain B, The 2.0 Angstrom Resolution Structure Of The Catalytic
Portion Of A Cyanobacterial Membrane-Bound Manganese
Superoxide Dismutase
Length = 248
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 219 GWCWSLTRPKGFVRISSTETENQPAAELKIPI 250
GW W + P+G +++ ST ++ P E PI
Sbjct: 165 GWVWLVRNPQGQLQVVSTPNQDNPIMEGSYPI 196
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,066,974
Number of Sequences: 62578
Number of extensions: 1197271
Number of successful extensions: 2647
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2583
Number of HSP's gapped (non-prelim): 39
length of query: 850
length of database: 14,973,337
effective HSP length: 107
effective length of query: 743
effective length of database: 8,277,491
effective search space: 6150175813
effective search space used: 6150175813
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)