Query 040705
Match_columns 850
No_of_seqs 273 out of 1723
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 10:58:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040705.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040705hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10426 alpha-glucosidase; Pr 100.0 4E-136 8E-141 1207.0 63.1 560 259-846 72-633 (635)
2 PRK10658 putative alpha-glucos 100.0 3E-123 6E-128 1099.9 61.8 568 189-833 89-665 (665)
3 COG1501 Alpha-glucosidases, fa 100.0 3E-120 5E-125 1081.8 54.9 531 256-846 140-680 (772)
4 PLN02763 hydrolase, hydrolyzin 100.0 4E-116 8E-121 1051.3 53.7 513 257-843 62-601 (978)
5 KOG1066 Glucosidase II catalyt 100.0 5E-112 1E-116 949.1 36.7 540 250-840 200-780 (915)
6 PF01055 Glyco_hydro_31: Glyco 100.0 1.9E-99 4E-104 868.7 40.1 428 367-836 1-441 (441)
7 KOG1065 Maltase glucoamylase a 100.0 2.9E-97 6E-102 858.6 41.4 540 245-846 156-718 (805)
8 cd06602 GH31_MGAM_SI_GAA This 100.0 5.3E-79 1.2E-83 675.3 31.9 332 386-763 1-339 (339)
9 cd06594 GH31_glucosidase_YihQ 100.0 1.8E-74 3.8E-79 633.7 32.0 314 386-720 1-316 (317)
10 cd06604 GH31_glucosidase_II_Ma 100.0 2.7E-74 5.9E-79 638.9 31.6 322 386-745 1-339 (339)
11 cd06600 GH31_MGAM-like This fa 100.0 2.6E-74 5.6E-79 633.0 30.4 312 386-745 1-317 (317)
12 cd06603 GH31_GANC_GANAB_alpha 100.0 9.1E-74 2E-78 634.6 30.9 323 386-745 1-339 (339)
13 cd06598 GH31_transferase_CtsZ 100.0 1.3E-69 2.8E-74 596.0 29.9 308 386-725 1-314 (317)
14 cd06593 GH31_xylosidase_YicI Y 100.0 9.3E-69 2E-73 587.5 29.1 300 386-725 1-303 (308)
15 cd06597 GH31_transferase_CtsY 100.0 5.1E-68 1.1E-72 587.6 27.6 307 386-716 1-330 (340)
16 cd06591 GH31_xylosidase_XylS X 100.0 1E-67 2.2E-72 581.4 27.7 305 386-719 1-317 (319)
17 cd06599 GH31_glycosidase_Aec37 100.0 2.8E-66 6.1E-71 569.6 26.4 294 386-713 1-310 (317)
18 cd06601 GH31_lyase_GLase GLase 100.0 7E-66 1.5E-70 567.0 26.0 287 386-725 1-329 (332)
19 cd06595 GH31_xylosidase_XylS-l 100.0 1.3E-62 2.8E-67 534.7 25.9 283 385-718 1-289 (292)
20 cd06589 GH31 The enzymes of gl 100.0 1.4E-58 3.1E-63 496.7 22.6 255 386-720 1-264 (265)
21 cd06592 GH31_glucosidase_KIAA1 100.0 1.6E-57 3.5E-62 497.2 24.5 284 389-719 12-301 (303)
22 cd06596 GH31_CPE1046 CPE1046 i 100.0 2.9E-38 6.3E-43 329.8 17.5 238 386-735 1-261 (261)
23 PF13802 Gal_mutarotas_2: Gala 99.4 2.3E-13 4.9E-18 116.6 4.9 65 268-348 1-68 (68)
24 PF02065 Melibiase: Melibiase; 99.2 1.1E-10 2.3E-15 132.1 15.2 138 405-558 55-195 (394)
25 COG3345 GalA Alpha-galactosida 98.6 1.7E-06 3.6E-11 98.4 17.3 175 367-557 260-445 (687)
26 PLN03231 putative alpha-galact 98.0 0.00024 5.2E-09 79.5 16.8 135 405-555 15-185 (357)
27 PLN02229 alpha-galactosidase 97.9 0.00012 2.5E-09 83.5 14.1 90 385-481 57-153 (427)
28 PLN02808 alpha-galactosidase 97.9 0.00015 3.2E-09 82.0 14.3 124 385-555 26-155 (386)
29 PLN02692 alpha-galactosidase 97.8 0.00025 5.4E-09 80.5 14.6 134 375-555 40-179 (412)
30 PLN02899 alpha-galactosidase 97.6 0.0012 2.5E-08 77.8 16.5 144 405-555 45-217 (633)
31 PLN02355 probable galactinol-- 97.0 0.012 2.5E-07 71.0 15.5 204 340-554 129-395 (758)
32 PLN02219 probable galactinol-- 96.9 0.016 3.5E-07 69.7 15.7 180 366-554 160-387 (775)
33 PLN02684 Probable galactinol-- 96.2 0.11 2.4E-06 62.7 16.2 203 340-555 128-387 (750)
34 TIGR02456 treS_nterm trehalose 95.9 0.083 1.8E-06 63.1 13.8 139 406-554 26-198 (539)
35 PLN02711 Probable galactinol-- 95.7 0.29 6.4E-06 59.3 16.5 202 340-554 139-406 (777)
36 PF14871 GHL6: Hypothetical gl 95.6 0.065 1.4E-06 52.1 8.9 84 459-554 47-132 (132)
37 PF00128 Alpha-amylase: Alpha 95.5 0.11 2.5E-06 56.0 11.7 136 409-556 5-171 (316)
38 PRK10785 maltodextrin glucosid 94.9 0.22 4.9E-06 60.3 12.6 138 405-557 176-339 (598)
39 PF02638 DUF187: Glycosyl hydr 94.6 0.45 9.7E-06 53.0 13.2 138 406-553 17-161 (311)
40 PF13200 DUF4015: Putative gly 94.2 0.53 1.2E-05 52.4 12.5 133 406-554 11-145 (316)
41 PRK10933 trehalose-6-phosphate 94.1 0.64 1.4E-05 55.8 13.9 142 406-559 31-206 (551)
42 TIGR02403 trehalose_treC alpha 94.0 0.77 1.7E-05 55.0 14.3 143 406-559 25-199 (543)
43 TIGR01515 branching_enzym alph 93.4 0.69 1.5E-05 56.2 12.7 128 414-555 163-297 (613)
44 PF05691 Raffinose_syn: Raffin 93.1 1.8 3.9E-05 53.0 15.3 183 366-555 156-390 (747)
45 COG1649 Uncharacterized protei 92.9 1.3 2.7E-05 51.1 12.9 144 397-553 48-206 (418)
46 PLN00196 alpha-amylase; Provis 92.7 0.79 1.7E-05 53.3 11.3 144 408-555 44-205 (428)
47 PRK03705 glycogen debranching 92.4 0.36 7.8E-06 59.0 8.4 92 457-555 243-338 (658)
48 TIGR02104 pulA_typeI pullulana 92.3 0.33 7.2E-06 58.9 7.9 89 457-555 230-321 (605)
49 TIGR02100 glgX_debranch glycog 91.6 0.56 1.2E-05 57.7 8.7 99 457-558 246-346 (688)
50 PF13199 Glyco_hydro_66: Glyco 91.1 0.63 1.4E-05 55.6 8.3 152 389-554 100-266 (559)
51 COG0366 AmyA Glycosidases [Car 91.0 2.2 4.7E-05 49.9 12.6 138 406-554 27-199 (505)
52 PRK14510 putative bifunctional 90.9 0.57 1.2E-05 61.1 8.3 97 457-556 248-345 (1221)
53 PLN02361 alpha-amylase 89.7 3.1 6.8E-05 48.0 12.1 143 408-557 29-183 (401)
54 COG1523 PulA Type II secretory 89.6 0.95 2.1E-05 55.4 8.1 94 457-556 266-362 (697)
55 PRK14705 glycogen branching en 89.4 3.3 7.1E-05 53.9 13.1 133 411-555 769-906 (1224)
56 PRK12313 glycogen branching en 88.7 2.3 5E-05 52.0 10.7 130 413-556 176-312 (633)
57 PLN02784 alpha-amylase 87.2 4.2 9.1E-05 50.7 11.5 143 408-555 521-675 (894)
58 TIGR02402 trehalose_TreZ malto 87.2 2.9 6.2E-05 50.2 10.1 81 457-555 161-246 (542)
59 TIGR02103 pullul_strch alpha-1 86.5 2 4.3E-05 54.2 8.4 95 457-559 405-502 (898)
60 TIGR02102 pullulan_Gpos pullul 86.3 1.6 3.4E-05 56.3 7.5 85 457-554 556-643 (1111)
61 PRK05402 glycogen branching en 84.5 8.7 0.00019 47.9 12.7 128 413-555 271-406 (726)
62 TIGR01370 cysRS possible cyste 84.4 2.3 4.9E-05 47.5 6.8 82 459-554 84-168 (315)
63 PRK12568 glycogen branching en 84.4 7.1 0.00015 48.3 11.6 127 412-554 274-409 (730)
64 KOG2366 Alpha-D-galactosidase 83.2 7.5 0.00016 43.9 10.1 69 406-479 58-131 (414)
65 PRK14706 glycogen branching en 82.9 10 0.00023 46.4 12.2 86 457-555 218-308 (639)
66 PRK13840 sucrose phosphorylase 79.4 35 0.00075 40.6 14.4 135 406-554 18-194 (495)
67 PLN02877 alpha-amylase/limit d 78.6 6.3 0.00014 50.1 8.4 94 458-558 468-564 (970)
68 PLN02447 1,4-alpha-glucan-bran 78.5 3.3 7.1E-05 51.3 5.9 135 411-557 254-394 (758)
69 PLN03244 alpha-amylase; Provis 75.0 6.6 0.00014 48.5 7.0 89 457-554 442-532 (872)
70 PRK09441 cytoplasmic alpha-amy 74.5 8.7 0.00019 45.4 7.9 35 524-558 203-238 (479)
71 KOG0471 Alpha-amylase [Carbohy 73.2 12 0.00027 44.9 8.8 136 420-557 50-217 (545)
72 PLN02960 alpha-amylase 73.2 7.2 0.00016 48.9 6.9 139 406-556 414-559 (897)
73 PF14885 GHL15: Hypothetical g 70.0 7.2 0.00016 34.7 4.4 57 498-554 17-75 (79)
74 KOG0470 1,4-alpha-glucan branc 68.5 8.5 0.00018 46.9 5.9 91 457-556 312-405 (757)
75 PRK09505 malS alpha-amylase; R 64.9 67 0.0014 39.9 12.7 30 528-557 435-465 (683)
76 COG2342 Predicted extracellula 64.0 32 0.00069 37.6 8.5 106 420-556 40-149 (300)
77 TIGR03852 sucrose_gtfA sucrose 63.8 65 0.0014 38.1 11.9 138 406-556 15-192 (470)
78 COG0296 GlgB 1,4-alpha-glucan 62.0 56 0.0012 39.9 11.1 135 407-556 164-306 (628)
79 PF02449 Glyco_hydro_42: Beta- 57.8 34 0.00075 38.9 8.2 124 406-557 8-138 (374)
80 PF10566 Glyco_hydro_97: Glyco 56.8 33 0.00072 37.6 7.4 65 406-478 30-95 (273)
81 PLN02982 galactinol-raffinose 45.8 6E+02 0.013 32.2 16.0 91 341-433 149-265 (865)
82 PF10694 DUF2500: Protein of u 40.9 65 0.0014 30.3 5.7 58 137-197 28-85 (110)
83 cd06569 GH20_Sm-chitobiase-lik 40.0 2.2E+02 0.0047 33.6 11.1 148 392-544 3-191 (445)
84 PF01120 Alpha_L_fucos: Alpha- 38.2 68 0.0015 36.3 6.5 26 450-476 86-111 (346)
85 smart00642 Aamy Alpha-amylase 34.2 1.2E+02 0.0026 30.5 6.9 70 406-479 17-93 (166)
86 smart00812 Alpha_L_fucos Alpha 32.7 1E+02 0.0022 35.5 6.8 27 449-476 75-101 (384)
87 PRK14582 pgaB outer membrane N 31.6 4.3E+02 0.0092 32.9 12.1 121 407-553 333-465 (671)
88 PF00331 Glyco_hydro_10: Glyco 30.8 68 0.0015 35.9 4.9 53 407-475 187-239 (320)
89 PRK15447 putative protease; Pr 30.7 2.7E+02 0.006 30.8 9.6 118 406-552 13-137 (301)
90 PF07611 DUF1574: Protein of u 29.4 96 0.0021 35.2 5.7 35 445-480 241-275 (345)
91 PF13653 GDPD_2: Glycerophosph 28.3 54 0.0012 23.8 2.3 17 538-554 12-28 (30)
92 PF07555 NAGidase: beta-N-acet 27.2 9.2E+02 0.02 27.0 14.2 153 398-618 2-164 (306)
93 smart00633 Glyco_10 Glycosyl h 26.0 1.1E+02 0.0023 33.0 5.2 54 407-475 135-188 (254)
94 TIGR03471 HpnJ hopanoid biosyn 24.9 3.1E+02 0.0068 32.2 9.3 109 406-543 321-433 (472)
95 PF01301 Glyco_hydro_35: Glyco 24.9 1.3E+02 0.0029 33.6 5.9 67 406-482 22-89 (319)
96 TIGR02455 TreS_stutzeri trehal 22.6 3E+02 0.0066 34.0 8.4 31 524-554 262-295 (688)
97 PF01373 Glyco_hydro_14: Glyco 22.1 2.4E+02 0.0052 32.7 7.2 100 408-518 16-122 (402)
98 PF03537 Glyco_hydro_114: Glyc 20.2 92 0.002 27.1 2.7 23 457-479 37-59 (74)
99 PF11308 GHL1-3: Glycosyl hydr 20.0 1.1E+02 0.0024 34.2 3.9 57 497-554 70-127 (307)
No 1
>PRK10426 alpha-glucosidase; Provisional
Probab=100.00 E-value=3.5e-136 Score=1207.00 Aligned_cols=560 Identities=42% Similarity=0.769 Sum_probs=515.5
Q ss_pred EEEEEEeCCCCCeEecCCCCCCCCCCCCEEEeEeeccCCCCCCCcc-ccccccccccCCCCCcCCCCceeEEEEEcceEE
Q 040705 259 VFLTYSSEGNERFYGFGEQFSHMDFKGKRVPIFVQEQGIGRGDQPI-TFAANLVSYRAGGDWSTTYAPSPFYMTSKMRSV 337 (850)
Q Consensus 259 ~~l~~~~~~~E~iYGlGE~~~~~~~~g~~~~~~~~e~g~g~~d~p~-~~~~n~~~y~~gg~~~~~Y~~~Pf~~ss~~~Gi 337 (850)
+.+++.+.++|++||||||++.+|+||+++++|+.|+|+|++++|+ ++++|.. ...+++..++|+++|||||+++|||
T Consensus 72 ~~~~~~~~~~E~~yGlGE~~~~l~~rG~~~~~w~~d~~~g~~~~~~~~~~~d~~-~~~gg~~~~tY~~iPf~iSs~~ygv 150 (635)
T PRK10426 72 IWLRLAADPDEHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQTYVTWQADCK-ENAGGDYYWTYFPQPTFVSSQKYYC 150 (635)
T ss_pred EEEEEecCCCCeEECCCcCCChHhhCCCEEeeeecccccCcCcccccccccccc-ccccCccccccceeCEEEEcCCEEE
Confidence 5567778899999999999999999999999999999999999984 4677764 3466788999999999999999999
Q ss_pred EEecccceeeecCCcceEEEEEecceEEEEEEeCCCHHHHHHHHHHHhCCCCCCchhhccceeeeecCCHHHHHHHHHHH
Q 040705 338 YLQGYDYSVFDLTRVDRVQIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDWIVSGAVAGMQGGTDAVRRVWDAL 417 (850)
Q Consensus 338 f~d~~~~~~fdl~~~~~v~~~~~gg~ld~y~~~G~tp~dvi~~Yt~LtGrp~lpP~Wa~~G~~lg~~~s~~~V~~v~~~~ 417 (850)
|+||++++.|||+.++...+++.++.+|+||+.|++|++|+++|++|||||+|||+||+.|+|+|+++++++|+++++++
T Consensus 151 ~~dn~~~~~fd~~~~~~~~~~~~~~~~d~y~~~G~~~~~vi~~yt~ltGr~p~~P~Wal~G~~~g~~~~~~~v~~v~~~~ 230 (635)
T PRK10426 151 HVDNSAYMNFDFSAPEYHELELWEDKATLRFECADTYISLLEKLTALFGRQPELPDWAYDGVTLGIQGGTEVVQKKLDTM 230 (635)
T ss_pred EEcCCCcEEEEecCCCccEEEEEeCCeeEEEEeCCCHHHHHHHHHHhhCCCCCCChhhccCccccccCCHHHHHHHHHHH
Confidence 99999999999998877777788899999999999999999999999999999999998899999998999999999999
Q ss_pred HhCCCCceeEEecccccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHH
Q 040705 418 RSYQVPVSAFWLQDWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEA 497 (850)
Q Consensus 418 r~~~IP~D~i~lDdw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~ 497 (850)
|+++||||++|||||++.+.+++|.+.||+|+||+++||||++||++||++|+|+++|++|+|.. ++++|+||
T Consensus 231 r~~~IP~d~i~lddw~~~~~~~~g~~~~~~~~~d~~~FPdp~~mi~~L~~~G~k~v~~i~P~v~~-------~~~~y~e~ 303 (635)
T PRK10426 231 RNAGVKVNGIWAQDWSGIRMTSFGKRLMWNWKWDSERYPQLDSRIKQLNEEGIQFLGYINPYLAS-------DGDLCEEA 303 (635)
T ss_pred HHcCCCeeEEEEecccccccccccccccccceEChhhCCCHHHHHHHHHHCCCEEEEEEcCccCC-------CCHHHHHH
Confidence 99999999999999998877788999999999999999999999999999999999999999963 57999999
Q ss_pred HhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHH-HHHhcCccEEEecCCCCCCCcceecCCCCcCcccCc
Q 040705 498 KKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQ-EMVEDGVRGWMADFGEGLPVDAILYSGEDPISAHNR 576 (850)
Q Consensus 498 ~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~-~l~~~Gvdg~w~D~gE~~p~d~~~~~G~~~~~~HN~ 576 (850)
+++||||++.+|++|.+.+|++.+++||||||+|++||++.++ .+.+.||||||+||||++|.|+.+++|.++.++||.
T Consensus 304 ~~~gy~vk~~~g~~~~~~~~~~~~~~~Dftnp~ar~Ww~~~~~~~~~~~Gvdg~w~D~~E~~p~d~~~~~g~~~~~~hN~ 383 (635)
T PRK10426 304 AEKGYLAKDADGGDYLVEFGEFYAGVVDLTNPEAYEWFKEVIKKNMIGLGCSGWMADFGEYLPTDAYLHNGVSAEIMHNA 383 (635)
T ss_pred HHCCcEEECCCCCEEEeEecCCCceeecCCCHHHHHHHHHHHHHHHhhcCCCEEeeeCCCCCCCcceeeCCCCHHHhccH
Confidence 9999999999999999999999999999999999999999875 577899999999999999999999999888899999
Q ss_pred hhHHHHHHHHHHHHHHhhcccCccccCCCCceEEEEecccCCCCCcccccccCCcccCCCcchhHHHHHHHHHHccccCC
Q 040705 577 YPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGY 656 (850)
Q Consensus 577 Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~aGsqry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~ 656 (850)
||++|+++++|++++.. +.+|||++|||+|+|+|||++++|+|||.++|+.++||+.+|+++|++||||+
T Consensus 384 Y~~l~~~~~~e~~~~~~----------~~~r~f~ltRsg~aGsQry~~~~WsGD~~ssW~~~d~L~~~I~~~Ls~glsG~ 453 (635)
T PRK10426 384 WPALWAKCNYEALEETG----------KLGEILFFMRAGYTGSQKYSTLFWAGDQNVDWSLDDGLASVVPAALSLGMSGH 453 (635)
T ss_pred HHHHHHHHHHHHHHHhc----------CCCCcEEEEccccCCcCCccccccCCCCCCcCcChhHHHHHHHHHHHHHhcCc
Confidence 99999999999987642 45699999999999999999778999999999877799999999999999999
Q ss_pred CccccCcCCCCCCCCCccccCCChhHHHHHHHHhcccccccccCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 040705 657 AFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTHEGNKPSFNSQFYSNQQTLSHFARFAKVYRAWKFYRIK 736 (850)
Q Consensus 657 pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~QlgaF~P~~R~H~~~~~~~~~~f~~~~~~~~~~~~~~~ry~lL~pY~Yt 736 (850)
||||+|||||.+.. ...+++|||+||+|+|+|+|+||+|+++.++++|+|....++++++++++++|..|.||+|+
T Consensus 454 ~~~g~DIGGF~~~~----~~~~~~EL~~RW~Q~gaF~P~~R~H~~~~~~epw~f~~~~~~~~~~~~~~~lRy~LlPYlyt 529 (635)
T PRK10426 454 GLHHSDIGGYTTLF----GMKRTKELLLRWCEFSAFTPVMRTHEGNRPGDNWQFDSDAETIAHFARMTRVFTTLKPYLKE 529 (635)
T ss_pred CccccccCCCcCcC----CCCCCHHHHHHHHHHhcCCceeecCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998621 12589999999999999999999999988888888876667778888877644344589999
Q ss_pred HHHHHHHcCcccccccccCCCCChhhhcccCCeEEecCCeeEeeeecCCCceEEEEccCCCCCcEEEcCCCcEEecCCeE
Q 040705 737 LVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEILVVPILDKGKKKVRVYFPVGETSTWQHIWTEKIFTGQGSE 816 (850)
Q Consensus 737 l~~ea~~~G~Pi~RPL~~efP~D~~~~~i~~dQfmlG~~LLVAPVle~g~t~r~VYLP~~~~g~W~D~~Tg~~y~ggG~~ 816 (850)
++++|+++|.||||||+++||+|+++++++ +|||||++||||||+++|+++|+||||+ |.|||||||++|+| | +
T Consensus 530 l~~~a~~tG~Pi~RPL~~~fP~D~~~~~i~-~qfm~G~~LLVAPV~~~g~~~r~VYLP~---g~W~d~~tg~~~~G-g-~ 603 (635)
T PRK10426 530 LVAEAAKTGLPVMRPLFLHYEDDAATYTLK-YQYLLGRDLLVAPVHEEGRTDWTVYLPE---DKWVHLWTGEAFAG-G-E 603 (635)
T ss_pred HHHHHHhhCCcccccccccCCCChHHhcCC-cceEecCCeEEeeeccCCceEEEEECCC---CcEEECCCCCEEEC-C-E
Confidence 999999999999999999999999999998 8999999999999999999999999999 89999999999975 6 8
Q ss_pred EEEEcCCCCCeEEEecCeEeecchhhcccc
Q 040705 817 AWVEAPIGYPAVFVKADSIVGETFRKNLRN 846 (850)
Q Consensus 817 ~~v~apld~iPvFVR~GsIIP~~~~~~l~~ 846 (850)
+++++||++||||||+||||+..+.+..+.
T Consensus 604 i~v~apl~~iPvFvR~Gsi~~~~~~~~~~~ 633 (635)
T PRK10426 604 ITVEAPIGKPPVFYRAGSEWASLFASLRSI 633 (635)
T ss_pred EEEeCCCCCcCEEEECCeEhHHHhhhhhhh
Confidence 999999999999999999999888765443
No 2
>PRK10658 putative alpha-glucosidase; Provisional
Probab=100.00 E-value=2.6e-123 Score=1099.94 Aligned_cols=568 Identities=23% Similarity=0.449 Sum_probs=499.3
Q ss_pred eeEEEEEecCCcceeeeccccceeeeec-CCcceecccCCCceeeeccCcCCccccccccCCCCCCceeceEEEEEEeCC
Q 040705 189 QIGFELKLGQPNFAIRQRRMGRIRIRKR-NLGWCWSLTRPKGFVRISSTETENQPAAELKIPIPQHREFNRVFLTYSSEG 267 (850)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 267 (850)
.+.++|+.++..+.++- +..++++.++ .+.++++ + .|-....++.+..+. + .. ...-..+..++.+.+
T Consensus 89 ~~~~~i~~~~~~~~i~s-~~l~v~i~~~~~~~i~~~-~--~g~~l~~~~~~~~~~---~-~~---~~~~~~~~~~~~l~~ 157 (665)
T PRK10658 89 DVKVEIEETEDYAELKS-GNLSARVSKGEFWSLDFL-R--NGRRLTGSQLKSNGY---V-QD---NDGRNYMREQLDLGV 157 (665)
T ss_pred CCceEEEEcCCEEEEEe-CCEEEEEEcCCCeEEEEE-E--CCeEEeeccCcccce---e-ec---CCCcEEEEEEEecCC
Confidence 35566666655555533 4556666655 4778877 2 232333334333331 0 00 011124777888999
Q ss_pred CCCeEecCCCCCCCCCCCCEEEeEeeccCCCCCCCccccccccccccCCCCCcCCCCceeEEEEEcceEEEEecccceee
Q 040705 268 NERFYGFGEQFSHMDFKGKRVPIFVQEQGIGRGDQPITFAANLVSYRAGGDWSTTYAPSPFYMTSKMRSVYLQGYDYSVF 347 (850)
Q Consensus 268 ~E~iYGlGE~~~~~~~~g~~~~~~~~e~g~g~~d~p~~~~~n~~~y~~gg~~~~~Y~~~Pf~~ss~~~Gif~d~~~~~~f 347 (850)
+|++||||||++.++++|+++.|||+|.| ...+++|++||||||+++||||+||++.+.|
T Consensus 158 ~E~~yGlGE~~~~l~~~G~~~~~wn~D~~--------------------~~~~~~Y~~iPf~~s~~gyGvf~dn~~~~~f 217 (665)
T PRK10658 158 GETVYGLGERFTAFVKNGQTVDIWNRDGG--------------------TSSEQAYKNIPFYLTNRGYGVFVNHPQCVSF 217 (665)
T ss_pred CCeEECCCccCCccccCCcEEEEEECCCC--------------------CCCccccccccEEEecCcEEEEEcCCCceEE
Confidence 99999999999999999999999987642 1346899999999999999999999999999
Q ss_pred ecCCc--ceEEEEEecceEEEEEEeCCCHHHHHHHHHHHhCCCCCCchhhccceeeee----cCCHHHHHHHHHHHHhCC
Q 040705 348 DLTRV--DRVQIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDWIVSGAVAGM----QGGTDAVRRVWDALRSYQ 421 (850)
Q Consensus 348 dl~~~--~~v~~~~~gg~ld~y~~~G~tp~dvi~~Yt~LtGrp~lpP~Wa~~G~~lg~----~~s~~~V~~v~~~~r~~~ 421 (850)
|++.+ +.+++.++++.+|+||+.|++|++|+++|++|||+|+|||+||+ |+|++. ..++++|+++++++++++
T Consensus 218 d~g~~~~~~~~~~~~g~~ldyy~~~G~tp~~v~~~Yt~LTGrp~lpP~Wal-G~w~s~~~~~~~~e~~v~~~~~~~r~~~ 296 (665)
T PRK10658 218 EVGSEKVSKVQFSVEGEYLEYFVIDGPTPKEVLDRYTALTGRPALPPAWSF-GLWLTTSFTTNYDEATVNSFIDGMAERD 296 (665)
T ss_pred EEecCccceEEEEecCCcEEEEEEeCCCHHHHHHHHHHHhCCCCCCchhhh-heeeecccccCCCHHHHHHHHHHHHHcC
Confidence 99875 57889999999999999999999999999999999999999998 999875 236889999999999999
Q ss_pred CCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhC
Q 040705 422 VPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKL 500 (850)
Q Consensus 422 IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~ 500 (850)
||||++++| +||... .|++|+||+++||||++|+++||++|+|+++|++|+|. .++++|+|++++
T Consensus 297 iP~d~i~lD~~w~~~~-------~~~~f~wd~~~FPdp~~mi~~L~~~G~k~~~~i~P~i~-------~~s~~f~e~~~~ 362 (665)
T PRK10658 297 LPLHVFHFDCFWMKEF-------QWCDFEWDPRTFPDPEGMLKRLKAKGLKICVWINPYIA-------QKSPLFKEGKEK 362 (665)
T ss_pred CCceEEEEchhhhcCC-------ceeeeEEChhhCCCHHHHHHHHHHCCCEEEEeccCCcC-------CCchHHHHHHHC
Confidence 999999999 898532 25699999999999999999999999999999999995 357999999999
Q ss_pred CcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHHhcCccEEEecCCCCCCCcceecCCCCcCcccCchhHH
Q 040705 501 DILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADFGEGLPVDAILYSGEDPISAHNRYPEL 580 (850)
Q Consensus 501 g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~~Gvdg~w~D~gE~~p~d~~~~~G~~~~~~HN~Y~~l 580 (850)
||||++++|+++++..|++.++++|||||+|++||.+.++++++.||||||+||||++|.|+.+++|.++.++||.|+++
T Consensus 363 gy~vk~~~G~~~~~~~W~g~~~~~Dftnp~ar~W~~~~~~~l~d~Gvdgfw~D~gE~~p~d~~~~~G~~~~~~hN~Y~~l 442 (665)
T PRK10658 363 GYLLKRPDGSVWQWDKWQPGMAIVDFTNPDACKWYADKLKGLLDMGVDCFKTDFGERIPTDVVWFDGSDPQKMHNYYTYL 442 (665)
T ss_pred CeEEECCCCCEeeeeecCCCceeecCCCHHHHHHHHHHHHHHHhcCCcEEEecCCceeeccceecCCCcHHHhcchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCccccCCCCceEEEEecccCCCCCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccc
Q 040705 581 WAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNH 660 (850)
Q Consensus 581 ~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~aGsqry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g 660 (850)
|+++++|++++.. +++|+|+++||+++|+|||++ +|+|||.|+|++ |+.+|+++|++||||+||||
T Consensus 443 ~~ka~~e~l~~~~----------~~~r~~i~tRs~~aGsQry~~-~WsGD~~stw~~---l~~si~~~Ls~glsG~~~~g 508 (665)
T PRK10658 443 YNKTVFDVLKETR----------GEGEAVLFARSATVGGQQFPV-HWGGDCYSNYES---MAESLRGGLSLGLSGFGFWS 508 (665)
T ss_pred HHHHHHHHHHHhc----------CCCceEEEEecccCCCCCCCC-EECCCCCCCHHH---HHHHHHHHHHHHhcCCcccc
Confidence 9999999987643 578999999999999999996 899999999984 99999999999999999999
Q ss_pred cCcCCCCCCCCCccccCCChhHHHHHHHHhcccccccccCCCCCCCCCCCCCchHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 040705 661 SDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTHEGNKPSFNSQFYSNQQTLSHFARFAK-VYRAWKFYRIKLVK 739 (850)
Q Consensus 661 ~DIGGF~g~~~p~~~~~~s~EL~iRW~QlgaF~P~~R~H~~~~~~~~~~f~~~~~~~~~~~~~~~-ry~lL~pY~Ytl~~ 739 (850)
+|||||.+ .+++|||+||+|+|+|+|+||+|+...+ ++||.+++++.++++++++ ||++| ||+|++++
T Consensus 509 ~DIGGF~g--------~~~~ELy~RW~Q~g~f~P~~R~Hg~~~~--~ePW~fg~e~~~i~r~~i~lRy~Ll-PYlYs~~~ 577 (665)
T PRK10658 509 HDIGGFEN--------TATADVYKRWCAFGLLSSHSRLHGSKSY--RVPWAYDEEAVDVVRFFTKLKCRLM-PYLYREAA 577 (665)
T ss_pred CccCCCCC--------CCCHHHHHHHHHhcccChhhcccCCCCC--cCCcccCHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 99999998 5789999999999999999999987654 4677777788888888886 56655 89999999
Q ss_pred HHHHcCcccccccccCCCCChhhhcccCCeEEecCCeeEeeeecCCCceEEEEccCCCCCcEEEcCCCcEEecCCeEEEE
Q 040705 740 EASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEILVVPILDKGKKKVRVYFPVGETSTWQHIWTEKIFTGQGSEAWV 819 (850)
Q Consensus 740 ea~~~G~Pi~RPL~~efP~D~~~~~i~~dQfmlG~~LLVAPVle~g~t~r~VYLP~~~~g~W~D~~Tg~~y~ggG~~~~v 819 (850)
+|+++|.||||||+|+||+|+++++++ +|||||++||||||++++. +|+||||+ |.|||||||++|+ ||+++++
T Consensus 578 ~a~~~G~PimRPL~~efP~D~~~~~~~-~qfmlG~~lLVAPV~~~~~-~r~VYLP~---G~W~d~~tg~~~~-Gg~~i~~ 651 (665)
T PRK10658 578 EAHERGTPMMRAMVLEFPDDPACDYLD-RQYMLGDSLLVAPVFSEAG-DVEYYLPE---GRWTHLLTGEEVE-GGRWHKE 651 (665)
T ss_pred HHHhhCCccccchhccCCCChHHhcCC-CceEecCCeEEeEeecCCc-eEEEEcCC---CeEEEccCCcEEE-CCEEEEE
Confidence 999999999999999999999999997 9999999999999999995 79999999 8999999999997 5889999
Q ss_pred EcCCCCCeEEEecC
Q 040705 820 EAPIGYPAVFVKAD 833 (850)
Q Consensus 820 ~apld~iPvFVR~G 833 (850)
++||++||||||+|
T Consensus 652 ~~~l~~iPvfvR~G 665 (665)
T PRK10658 652 QHDFLSLPLLVRPN 665 (665)
T ss_pred eCCCccCCEEEcCC
Confidence 99999999999998
No 3
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-120 Score=1081.76 Aligned_cols=531 Identities=29% Similarity=0.575 Sum_probs=483.5
Q ss_pred eceEEEEEEeCCCCCeEecCCCCCCCCCCCCEEEeEeeccCCCCCCCccccccccccccCCCCCcCCCCceeEEEEEcce
Q 040705 256 FNRVFLTYSSEGNERFYGFGEQFSHMDFKGKRVPIFVQEQGIGRGDQPITFAANLVSYRAGGDWSTTYAPSPFYMTSKMR 335 (850)
Q Consensus 256 ~~~~~l~~~~~~~E~iYGlGE~~~~~~~~g~~~~~~~~e~g~g~~d~p~~~~~n~~~y~~gg~~~~~Y~~~Pf~~ss~~~ 335 (850)
-..+.+++.+..+|++|||||+++.+++.++++.+|+.|. .++. +.+.+++|.++||++|+.+|
T Consensus 140 ~~~~~~~~~~~~~e~~yGlge~~~~l~~~~~~~~~wn~D~---------------~~~~-~~~~~~~y~~iPf~~s~~gy 203 (772)
T COG1501 140 GGYVFLYFDLGGGEHVYGLGERAGGLGRNGQTYRLWNADA---------------GTYT-GGDYDNLYASIPFYLSSRGY 203 (772)
T ss_pred CccEEEEEEecCCceEeeccccccccccCcceEEeeecCC---------------Cccc-ccccccccccCCEEEEccce
Confidence 3568889999999999999999999999999999997543 2322 23578999999999999999
Q ss_pred EEEEecccceeeecCCcc--eEEEEEecceEEEEEEeCCCHHHHHHHHHHHhCCCCCCchhhccc-eeeee--cCCHHHH
Q 040705 336 SVYLQGYDYSVFDLTRVD--RVQIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDWIVSG-AVAGM--QGGTDAV 410 (850)
Q Consensus 336 Gif~d~~~~~~fdl~~~~--~v~~~~~gg~ld~y~~~G~tp~dvi~~Yt~LtGrp~lpP~Wa~~G-~~lg~--~~s~~~V 410 (850)
|+|++|++.+.||++.+. .+.+.++++.+||||+.|+++++|+++|++|||||+|||+||+ | .|.++ +.++++|
T Consensus 204 g~~~~n~~~~~fd~~~~~~~~~~~~~e~~~ldyyv~~G~~~~~vi~~yt~lTGkp~l~P~Wa~-G~~~~~~~~~~~e~~v 282 (772)
T COG1501 204 GLFVDNSAYGSFDVGSEEYSYVQFSVEGGQLDYYVIAGPTPKDVLEKYTDLTGKPPLPPKWAL-GWLWTSRYTYYDEDEV 282 (772)
T ss_pred EEEEECCCceEEEcCCcceEEEEEEecCCcEEEEEEeCCCHHHHHHHHHHhhCCCCCCCceec-CCCceeccccccHHHH
Confidence 999999999999998853 4567788889999999999999999999999999999999998 7 55554 3468999
Q ss_pred HHHHHHHHhCCCCceeEEec-c-cccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceEEEecCCccCCCCCCCC
Q 040705 411 RRVWDALRSYQVPVSAFWLQ-D-WVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPN 488 (850)
Q Consensus 411 ~~v~~~~r~~~IP~D~i~lD-d-w~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~ 488 (850)
.++++++++++||||+|||| + |++. |.+|+||+++||||++|+++||++|+|+|+|++|+|..
T Consensus 283 ~~~i~~~~~~~IP~d~~~lD~~~~~~~---------~~~F~wd~~~FP~pk~mi~~l~~~Gikl~~~i~P~i~~------ 347 (772)
T COG1501 283 LEFIDEMRERDIPLDVFVLDIDFWMDN---------WGDFTWDPDRFPDPKQMIAELHEKGIKLIVIINPYIKQ------ 347 (772)
T ss_pred HHHHhhcccccCcceEEEEeehhhhcc---------ccceEECcccCCCHHHHHHHHHhcCceEEEEecccccc------
Confidence 99999999999999999999 6 7642 23799999999999999999999999999999999964
Q ss_pred ccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHH-HHHHHHhcCccEEEecCCCCCCCcce-ecC
Q 040705 489 RRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQ-VLQEMVEDGVRGWMADFGEGLPVDAI-LYS 566 (850)
Q Consensus 489 ~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~-~l~~l~~~Gvdg~w~D~gE~~p~d~~-~~~ 566 (850)
+.++|+|++++|||||+++|+++.+.+|++.++++|||||+||+||++ ..+.++++||+|||+||||+.++|.. +++
T Consensus 348 -d~~~~~e~~~~Gy~~k~~~g~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~~l~d~Gv~g~W~D~nEp~~~~~~~~~~ 426 (772)
T COG1501 348 -DSPLFKEAIEKGYFVKDPDGEIYQADFWPGNSAFPDFTNPDAREWWASDKKKNLLDLGVDGFWNDMNEPEPFDGDGFGN 426 (772)
T ss_pred -CCchHHHHHHCCeEEECCCCCEeeecccCCcccccCCCCHHHHHHHHHHHHhHHHhcCccEEEccCCCCcccccccccc
Confidence 358999999999999999999999999999999999999999999995 66779999999999999999999887 788
Q ss_pred CCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEEEEecccCCCCCcccccccCCcccCCCcchhHHHHHH
Q 040705 567 GEDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVV 646 (850)
Q Consensus 567 G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~aGsqry~~~~WtGD~~ssW~~~dgL~~sI~ 646 (850)
|.++.++||.||+++++++++++++.. +++|||+||||+|+|+|||++ +|+||+.++|+ +|+.+|+
T Consensus 427 g~~~~~~~N~yp~~~~~a~~~~~~~~~----------~~~r~~~lsRsg~aG~Q~~~~-~WsGD~~s~wd---~l~~si~ 492 (772)
T COG1501 427 GIDHEEMHNLYPLLYAKAVYEALKELG----------GNERPFILSRSGYAGSQRYAA-HWSGDNRSSWD---SLRESIP 492 (772)
T ss_pred ccCHHHHhcchhHHHHHHHHHHHHhhc----------CCCceEEEEecccccceeccc-eeCCccccchH---HHHhhHH
Confidence 999999999999999999999998753 789999999999999999996 89999999997 4999999
Q ss_pred HHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHHhcccccccccCCCCCCCCCCCCCchHHHHHHHHHHH-
Q 040705 647 GLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTHEGNKPSFNSQFYSNQQTLSHFARFAK- 725 (850)
Q Consensus 647 ~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~QlgaF~P~~R~H~~~~~~~~~~f~~~~~~~~~~~~~~~- 725 (850)
++|++||||+||||+|||||.|.+ .+++|||+||+|+|+|+|+||+|+. +...++||.+++++.++++++++
T Consensus 493 ~~Ls~~~sGi~~wg~DiGGF~g~~------~~~~EL~~RW~q~g~F~P~~R~H~~-d~~~rePW~~~e~~~~i~r~~~~l 565 (772)
T COG1501 493 AGLSLSLSGIPFWGHDIGGFTGGD------DPTAELYIRWYQFGAFSPIFRLHGN-DNIPREPWAFGEETEEIVREYIQL 565 (772)
T ss_pred hhhchhccCCccccccccccCCCC------CCCHHHHHHHHHHHhcCchhhhhCC-CCCCCCCccCChhHHHHHHHHHHH
Confidence 999999999999999999999841 5799999999999999999999998 33445677777788888888876
Q ss_pred HHHHHHHHHHHHHHHHHHcCcccccccccCCCCChhhhcccCCeEEecCCeeEeeeecCCCceEEEEccCCCCCcEEEcC
Q 040705 726 VYRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEILVVPILDKGKKKVRVYFPVGETSTWQHIW 805 (850)
Q Consensus 726 ry~lL~pY~Ytl~~ea~~~G~Pi~RPL~~efP~D~~~~~i~~dQfmlG~~LLVAPVle~g~t~r~VYLP~~~~g~W~D~~ 805 (850)
||++| ||+|+++.+|+++|.|||||||++||+|+++++++ +|||||++||||||+++|+++|+||||+ |.|||||
T Consensus 566 R~~Ll-PYiYt~~~~a~~tG~P~mRplf~~fp~D~~~~~id-dqym~G~~lLVAPV~~eg~~~r~vyLP~---g~W~d~~ 640 (772)
T COG1501 566 RYRLL-PYIYTLAAEASETGLPMMRPLFLEFPEDETTYNLD-DQYMFGDDLLVAPVVEEGQTSREVYLPE---GTWYDFW 640 (772)
T ss_pred HHccc-hHHHHHHHHHhccCCcceehhheeCCCChhhhhcc-cceecccceEEeeccccCcceEEEECCC---ceEEEcc
Confidence 66666 89999999999999999999999999999999998 9999999999999999999999999997 9999999
Q ss_pred CCcEEecCCeEEEEEcCCCCCeEEEecCeEeecchhhcccc
Q 040705 806 TEKIFTGQGSEAWVEAPIGYPAVFVKADSIVGETFRKNLRN 846 (850)
Q Consensus 806 Tg~~y~ggG~~~~v~apld~iPvFVR~GsIIP~~~~~~l~~ 846 (850)
||+.|+ ||+++++.||+++||||||+|||||++...+...
T Consensus 641 tg~~~~-Gg~~i~~~apl~~iPvfvR~Gsiip~~~~~~~~~ 680 (772)
T COG1501 641 TGEEYE-GGQTITVEAPLETIPVFVRAGSIIPLLENELYVG 680 (772)
T ss_pred CCCEEe-CCeeEEEecCccCCceEEecCceeecccchhhcc
Confidence 999998 4789999999999999999999999998866543
No 4
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=100.00 E-value=3.8e-116 Score=1051.26 Aligned_cols=513 Identities=21% Similarity=0.369 Sum_probs=456.6
Q ss_pred ceEEEEEEeCCCCCeEecCCCCCCCCCCCCEEEeEeeccCCCCCCCccccccccccccCCCCCcCCCCceeEEEEE----
Q 040705 257 NRVFLTYSSEGNERFYGFGEQFSHMDFKGKRVPIFVQEQGIGRGDQPITFAANLVSYRAGGDWSTTYAPSPFYMTS---- 332 (850)
Q Consensus 257 ~~~~l~~~~~~~E~iYGlGE~~~~~~~~g~~~~~~~~e~g~g~~d~p~~~~~n~~~y~~gg~~~~~Y~~~Pf~~ss---- 332 (850)
+.+.+.+.++++|++|||||+++.++++|+++.+||.|. .+|+.+ .+++|++|||||+.
T Consensus 62 ~~~~~~~~l~~~e~~YGlGE~~g~L~rrG~~~~lwN~D~---------------~gy~~~--~~~LY~siPf~l~~~~~g 124 (978)
T PLN02763 62 DQQIVTFELPSGTSFYGTGEVSGPLERTGKRVYTWNTDA---------------WGYGQN--TTSLYQSHPWVFVVLPNG 124 (978)
T ss_pred CEEEEEEEcCCCCeEEeCCccCCccccCCcEEEEEECCC---------------CccCCC--CCcccccEeEEEEEecCC
Confidence 457788999999999999999999999999999998653 223322 46899999999984
Q ss_pred cceEEEEecccceeeecCCcceEEEEEecceEEEEEE-eC--CCHHHHHHHHHHHhCCCCCCchhhccceeeeec--CCH
Q 040705 333 KMRSVYLQGYDYSVFDLTRVDRVQIQIHGNSVQGRIL-HG--NSPCELIEHFTETIGRPPELPDWIVSGAVAGMQ--GGT 407 (850)
Q Consensus 333 ~~~Gif~d~~~~~~fdl~~~~~v~~~~~gg~ld~y~~-~G--~tp~dvi~~Yt~LtGrp~lpP~Wa~~G~~lg~~--~s~ 407 (850)
.+||||+||+..+.||++.+..+.|.+++ ++|++ +| ++|++|+++|++|||+|+|||+||+ |+|+|++ .++
T Consensus 125 ~~yGVf~dns~~~~fDlg~~~~~~f~a~~---~y~~i~~G~gptp~eVi~~Yt~LTGrp~mpP~WAL-Gy~qSR~~Y~sq 200 (978)
T PLN02763 125 EALGVLADTTRRCEIDLRKESIIRIIAPA---SYPVITFGPFPSPEALLTSLSHAIGTVFMPPKWAL-GYQQCRWSYESA 200 (978)
T ss_pred cEEEEEEeCCCcEEEEEcCCceEEEEecC---ceEEEEecCCCCHHHHHHHHHHHhCCCCCCchHHh-heeeccCCCCCH
Confidence 46999999999999999988777777654 67765 56 7999999999999999999999998 9999874 489
Q ss_pred HHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceEEEecCCccCCCCCC
Q 040705 408 DAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEK 486 (850)
Q Consensus 408 ~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~~~~k 486 (850)
++|++++++||+++||||++|+| |||+.+ .+||||+++||||++|+++||++|+|++++++|+|..
T Consensus 201 ~eV~eva~~fre~~IP~DvIwlDidYm~g~---------~~FTwD~~rFPdP~~mv~~Lh~~G~kvv~iidPgI~~---- 267 (978)
T PLN02763 201 KRVAEIARTFREKKIPCDVVWMDIDYMDGF---------RCFTFDKERFPDPKGLADDLHSIGFKAIWMLDPGIKA---- 267 (978)
T ss_pred HHHHHHHHHHHHcCCCceEEEEehhhhcCC---------CceeECcccCCCHHHHHHHHHHCCCEEEEEEcCCCcc----
Confidence 99999999999999999999999 998532 2799999999999999999999999999999999953
Q ss_pred CCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHHhcCccEEEecCCCCCCCcc----
Q 040705 487 PNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADFGEGLPVDA---- 562 (850)
Q Consensus 487 ~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~~Gvdg~w~D~gE~~p~d~---- 562 (850)
+.+|..|+++.++++||++.+|++|++.+|++.+++||||||+|++||.+.++++++.||||||+|||||..++.
T Consensus 268 -d~gY~~y~eg~~~~~fvk~~~G~~y~G~vWpG~~~fpDFTnP~ar~WW~~~~k~l~d~GVDG~W~DmnEPa~f~~~~~t 346 (978)
T PLN02763 268 -EEGYFVYDSGCENDVWIQTADGKPFVGEVWPGPCVFPDFTNKKTRSWWANLVKDFVSNGVDGIWNDMNEPAVFKTVTKT 346 (978)
T ss_pred -CCCCHHHHhHhhcCeeEECCCCCeeEeeecCCCccccCCCCHHHHHHHHHHHHHHhcCCCcEEEccCCCCccccCCcCC
Confidence 456999999999999999999999999999999999999999999999999999999999999999999976532
Q ss_pred ----eecCCC-------CcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEEEEecccCCCCCcccccccCCc
Q 040705 563 ----ILYSGE-------DPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQ 631 (850)
Q Consensus 563 ----~~~~G~-------~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~aGsqry~~~~WtGD~ 631 (850)
..+.|. .+.++||+|+++++++++|++++.. +++|||++|||+|+|+|||++ +|+|||
T Consensus 347 ~P~~~~h~g~~~~gG~~~h~~~HNlYgll~akatyEgl~~~~----------~~kRPFilTRSgfaGsQRYaa-~WtGDn 415 (978)
T PLN02763 347 MPETNIHRGDEELGGVQNHSHYHNVYGMLMARSTYEGMLLAN----------KNKRPFVLTRAGFIGSQRYAA-TWTGDN 415 (978)
T ss_pred CCccccccCCcccCCccCHHHHhhhhHHHHHHHHHHHHHHhC----------CCCCcEEEEccccCcCCCCce-EECCCc
Confidence 112221 3568999999999999999987642 788999999999999999997 899999
Q ss_pred ccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHHhcccccccccCCCCCCCCCCCC
Q 040705 632 MVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTHEGNKPSFNSQFY 711 (850)
Q Consensus 632 ~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~QlgaF~P~~R~H~~~~~~~~~~f~ 711 (850)
.++|++ |+.+|+++|++||||+||||+|||||.| ++++|||+||+|+|+|+|+||+|+......++||.
T Consensus 416 ~SsWe~---L~~sI~~~LnlgLSGipf~G~DIGGF~G--------~~~~ELy~RW~Q~GaF~P~fR~Hs~~gt~~qEPW~ 484 (978)
T PLN02763 416 LSNWEH---LHMSIPMVLQLGLSGQPLSGPDIGGFAG--------DATPKLFGRWMGVGAMFPFARGHSEQGTIDHEPWS 484 (978)
T ss_pred cCCHHH---HHHHHHHHHHHHhcCCcccccccCCCCC--------CCCHHHHHHHHHHhhhhHHhhhccCCCCCCcCCee
Confidence 999985 9999999999999999999999999998 67999999999999999999999987666678888
Q ss_pred CchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCcccccccccCCCCChhhhcccCCeEEecCCeeEeee-ecCCCceE
Q 040705 712 SNQQTLSHFARFAK-VYRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEILVVPI-LDKGKKKV 789 (850)
Q Consensus 712 ~~~~~~~~~~~~~~-ry~lL~pY~Ytl~~ea~~~G~Pi~RPL~~efP~D~~~~~i~~dQfmlG~~LLVAPV-le~g~t~r 789 (850)
+++++...++++++ ||++| ||+||++++|+++|.||||||||+||+|+++++++ +|||||++|||||| +++|+++|
T Consensus 485 fgeev~~i~R~ai~LRYrLL-PYiYSL~~eA~~tG~PImRPL~~efP~D~~a~~id-dQFM~G~~LLVAPVv~~~g~tsr 562 (978)
T PLN02763 485 FGEECEEVCRLALKRRYRLL-PHFYTLFYKAHTTGLPVMTPIFFADPKDPSLRKVE-NSFLLGPLLISASTLPDQGSDNL 562 (978)
T ss_pred cChHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCceeeceecCCCCChHHhccC-ceEEEcCCeEEcceeccCCceEE
Confidence 87777777777775 78766 79999999999999999999999999999999997 99999999999998 58899999
Q ss_pred EEEccCCCCCcEEEcCCCcEEecCCeEEEEEcCCCCCeEEEecCeEeecchhhc
Q 040705 790 RVYFPVGETSTWQHIWTEKIFTGQGSEAWVEAPIGYPAVFVKADSIVGETFRKN 843 (850)
Q Consensus 790 ~VYLP~~~~g~W~D~~Tg~~y~ggG~~~~v~apld~iPvFVR~GsIIP~~~~~~ 843 (850)
+||||+ |.||||||++.+. +.+|||||+|+|||++...+
T Consensus 563 ~VYLP~---G~WyDf~t~~~~~------------~~pplfVR~GsIIPl~~~~~ 601 (978)
T PLN02763 563 QHVLPK---GIWQRFDFDDSHP------------DLPLLYLQGGSIIPLGPPIQ 601 (978)
T ss_pred EEECCC---CcEEecCCCCccc------------CCccEEEeCCEEEEeccccc
Confidence 999999 8899999987431 45579999999999976544
No 5
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.8e-112 Score=949.11 Aligned_cols=540 Identities=23% Similarity=0.413 Sum_probs=489.2
Q ss_pred CCCCceeceEEEEEEeCCCCCeEecCCCCCCCCCCCCEEEeEeeccCCCCCCCccc-cccccccccCCCCCcCCCCceeE
Q 040705 250 IPQHREFNRVFLTYSSEGNERFYGFGEQFSHMDFKGKRVPIFVQEQGIGRGDQPIT-FAANLVSYRAGGDWSTTYAPSPF 328 (850)
Q Consensus 250 ~~~~~~~~~~~l~~~~~~~E~iYGlGE~~~~~~~~g~~~~~~~~e~g~g~~d~p~~-~~~n~~~y~~gg~~~~~Y~~~Pf 328 (850)
+.+|.+-..|.+.|+....+++||+.|+.+++.+|..+ | +.+|++ +|.|+++|..+ +...+|++|||
T Consensus 200 DskP~Gp~SVglD~sF~~~~~vyGIPEHA~s~~Lk~T~--------g---~~ePYRLyNlDVFEYe~~-spmalYGSIP~ 267 (915)
T KOG1066|consen 200 DSKPHGPESVGLDFSFVGSKNVYGIPEHADSLRLKDTS--------G---GSEPYRLYNLDVFEYELN-SPMALYGSIPF 267 (915)
T ss_pred CCCCCCCceeEEeEEecccceeecCcccccceEeeccC--------C---CCCceeEeecceEEEecC-CcchheecccE
Confidence 45566667799999999999999999999999988754 1 568998 69999999988 68999999999
Q ss_pred EEEEcce---EEEEecccceeeecCCcc---------------------eEEEEEecceEEEEEEeCCCHHHHHHHHHHH
Q 040705 329 YMTSKMR---SVYLQGYDYSVFDLTRVD---------------------RVQIQIHGNSVQGRILHGNSPCELIEHFTET 384 (850)
Q Consensus 329 ~~ss~~~---Gif~d~~~~~~fdl~~~~---------------------~v~~~~~gg~ld~y~~~G~tp~dvi~~Yt~L 384 (850)
++++... |+||-|.+.+.+|+..+. ...+-.+.|.+|.++++||+|.||++||++|
T Consensus 268 m~ah~~~r~~g~fW~NAAeTWVDi~~~t~~~~~s~~~~~~~~s~~~p~~~thw~SEsGiiDvFi~lGP~~~Dv~~qyaaL 347 (915)
T KOG1066|consen 268 MLAHGPNRDVGIFWLNAAETWVDIQSSTTDGLFSKMVDPVSGSQKVPQTDTHWMSESGIIDVFIFLGPKPSDVFRQYAAL 347 (915)
T ss_pred EEecCCCCceeeEEecchhheEEeeccccccccccccccCCCCCCCCCccceeeccCCcEEEEEEeCCChhHHHHHHHhh
Confidence 9998764 999999999999974321 2457789999999999999999999999999
Q ss_pred hCCCCCCchhhccceeeeec--CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHH
Q 040705 385 IGRPPELPDWIVSGAVAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQL 461 (850)
Q Consensus 385 tGrp~lpP~Wa~~G~~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~m 461 (850)
||+++|||..|+ |+|+|+| .++++|.+|-++|.+++||+|++||| .+. .|+|| ||||+.+||+|+.|
T Consensus 348 TG~~~LPplFsi-GYHQcRWNY~DE~DV~~Vd~~FDehdiP~DviWLDIEht------dgKrY---FTWDk~~FP~P~~M 417 (915)
T KOG1066|consen 348 TGTTPLPPLFSI-GYHQCRWNYNDEEDVLTVDQGFDEHDIPYDVIWLDIEHT------DGKRY---FTWDKHKFPNPKDM 417 (915)
T ss_pred cCCCCCCchhhc-chhhccccccchhhhhhhhcCccccCCccceEEEeeeec------CCcee---EeeccccCCCHHHH
Confidence 999999999998 9999986 48999999999999999999999999 443 35554 89999999999999
Q ss_pred HHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHH
Q 040705 462 LKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQE 541 (850)
Q Consensus 462 i~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~ 541 (850)
+++|.++|.|+++++||+|. .+.+|.+++|++++||+||+.+|+.|.+.||||.+.+|||.||++|+||++++..
T Consensus 418 l~kLa~kgRklV~IvDPHIK-----kD~~Y~v~ke~~~~gy~VKd~~G~DyeG~CWPG~S~yiDf~nP~~r~wW~~~faf 492 (915)
T KOG1066|consen 418 LKKLASKGRKLVTIVDPHIK-----KDDGYFVHKEAKDKGYYVKDRDGSDYEGWCWPGSSSYIDFINPEARKWWKSQFAF 492 (915)
T ss_pred HHHHHhcCCceEEEeCcccc-----cCCCeEEhHHhhhCCeEEEecCCCcccccccCCCcccccccCHHHHHHHhhhccc
Confidence 99999999999999999995 4567999999999999999999999999999999999999999999999998762
Q ss_pred HHhcCcc---EEEecCCCCC---------CCcceecCCCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceE
Q 040705 542 MVEDGVR---GWMADFGEGL---------PVDAILYSGEDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLV 609 (850)
Q Consensus 542 l~~~Gvd---g~w~D~gE~~---------p~d~~~~~G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpf 609 (850)
..-.|.. .+|+|||||. |.|+.|+.|.+++++||.||++...++++++.... ...+|||
T Consensus 493 d~y~g~t~nl~iWNDMNEPSVFnGPEiTm~kDaiHyGg~EHRdVHNiYG~~~h~aT~dGl~~R~---------~g~~RPF 563 (915)
T KOG1066|consen 493 DRYEGSTPNLFIWNDMNEPSVFNGPEITMPKDAIHYGGWEHRDVHNIYGLMVHMATFDGLIARS---------GGKERPF 563 (915)
T ss_pred ccccCCCCceEEeccCCCccccCCCccccchhhhhcCCeeechhhhhhceeeeehhhhhhhhhc---------CCCcCce
Confidence 2213432 5899999985 45788899999999999999999999999987532 3578999
Q ss_pred EEEecccCCCCCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHH
Q 040705 610 FFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMEL 689 (850)
Q Consensus 610 ilsRSg~aGsqry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~Ql 689 (850)
++|||.|+|||||++ .|+|||.++|++ |+-||+|+|++|++|+||+|+|||||+| +|++||++||+|.
T Consensus 564 vLsRafFaGsQR~aA-iWTGDN~A~W~H---LkiSiPM~Lsl~iaG~~F~GADVgGFFg--------NPd~ELlvRWYQ~ 631 (915)
T KOG1066|consen 564 VLSRAFFAGSQRTAA-IWTGDNTADWDH---LKISIPMVLSLGIAGMPFVGADVGGFFG--------NPDPELLVRWYQT 631 (915)
T ss_pred EEEeccccCccceee-eeccCCccchhh---heeecceeEecccccceecccccccccC--------CCCHHHHHHHHHh
Confidence 999999999999998 799999999986 9999999999999999999999999999 7999999999999
Q ss_pred hcccccccccCCCCCCCCCCCCCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCcccccccccCCCCChhhhcccCC
Q 040705 690 NAFTTVFRTHEGNKPSFNSQFYSNQQTLSHFARFAK-VYRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQ 768 (850)
Q Consensus 690 gaF~P~~R~H~~~~~~~~~~f~~~~~~~~~~~~~~~-ry~lL~pY~Ytl~~ea~~~G~Pi~RPL~~efP~D~~~~~i~~d 768 (850)
|+|+||||.|...++++++||.+.+++..++|.+++ ||.+| ||+|||+++++.+|.|||||||++||+|.+++.++ +
T Consensus 632 gaf~PFFRaHAHiDTkRREPWLf~e~~~~iiRdal~~RY~lL-P~wYTlFye~~~tG~PvmrPl~~e~peD~~~f~iD-~ 709 (915)
T KOG1066|consen 632 GAFQPFFRAHAHIDTKRREPWLFPEQTTQIIRDALRTRYALL-PYWYTLFYEHHVTGVPVMRPLFMEFPEDEELFEID-D 709 (915)
T ss_pred cccchhhhhhccccccccCccccCcchHHHHHHHHHHHHHHH-HHHHHHHHHhhccCCCccchhHhhCccchhhhccc-c
Confidence 999999999999999999999999888888888774 88888 79999999999999999999999999999999998 8
Q ss_pred eEEecCCeeEeeeecCCCceEEEEccCCCCCcEEEcCCCcEEecCCeEEEEEcCCCCCeEEEecCeEeecch
Q 040705 769 QFLVGTEILVVPILDKGKKKVRVYFPVGETSTWQHIWTEKIFTGQGSEAWVEAPIGYPAVFVKADSIVGETF 840 (850)
Q Consensus 769 QfmlG~~LLVAPVle~g~t~r~VYLP~~~~g~W~D~~Tg~~y~ggG~~~~v~apld~iPvFVR~GsIIP~~~ 840 (850)
|||+|+.|||-||+++|..+++||||.+.+..|||+-+++.|.|+| ++.|+|||++||||.|+|+|||+..
T Consensus 710 Q~~vgsgLLVkPV~e~g~~~v~vylP~g~~evwyd~~s~~~~~g~g-~~~vpapl~~iPv~qrGGtIip~~~ 780 (915)
T KOG1066|consen 710 QFMVGSGLLVKPVTEKGTSEVQVYLPRGKGEVWYDWVSGQEYRGPG-TVYVPAPLTSIPVFQRGGTIIPTKD 780 (915)
T ss_pred eEEEccccEEeecccCCcceeEEEcCCCCccEEEEcccCceecCCC-cEEecCcccccceeeeCceecchHH
Confidence 9999999999999999999999999984345899999999998766 8999999999999999999999754
No 6
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=100.00 E-value=1.9e-99 Score=868.70 Aligned_cols=428 Identities=33% Similarity=0.647 Sum_probs=368.8
Q ss_pred EEEeCCCHHHHHHHHHHHhCCCCCCchhhccceeeeecC--CHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCce
Q 040705 367 RILHGNSPCELIEHFTETIGRPPELPDWIVSGAVAGMQG--GTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQ 443 (850)
Q Consensus 367 y~~~G~tp~dvi~~Yt~LtGrp~lpP~Wa~~G~~lg~~~--s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~ 443 (850)
|||.|++|++|+++|++|||||+|||+|++ |+|+|.++ ++++|+++++++++++||||++|+| +|+...
T Consensus 1 y~~~G~~~~~v~~~y~~ltG~~~~pP~wal-G~~~~~~~~~~~~~v~~~i~~~~~~~iP~d~~~iD~~~~~~~------- 72 (441)
T PF01055_consen 1 YFFSGPTPKEVLRQYTELTGRPPLPPRWAL-GFWQSRWGYYNQDEVREVIDRYRSNGIPLDVIWIDDDYQDGY------- 72 (441)
T ss_dssp EEEEESSHHHHHHHHHHHHSSS----GGGG-SEEEEESTBTSHHHHHHHHHHHHHTT--EEEEEE-GGGSBTT-------
T ss_pred CEEeCcCHHHHHHHHHHHHCCCCCCchhhh-ceEeecCcCCCHHHHHHHHHHHHHcCCCccceeccccccccc-------
Confidence 799999999999999999999999999998 99999864 6999999999999999999999999 554321
Q ss_pred eeeeeeecCCCCcChHHHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEe
Q 040705 444 LWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGM 523 (850)
Q Consensus 444 ~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~ 523 (850)
++|+||+++|||+++|++.||++|+|+++|++|+|...+ ..++.|++++++|+||++++|+++++.+|++.+++
T Consensus 73 --~~f~~d~~~FPd~~~~~~~l~~~G~~~~~~~~P~v~~~~----~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~g~~~~ 146 (441)
T PF01055_consen 73 --GDFTWDPERFPDPKQMIDELHDQGIKVVLWVHPFVSNDS----PDYENYDEAKEKGYLVKNPDGSPYIGRVWPGKGGF 146 (441)
T ss_dssp --BTT-B-TTTTTTHHHHHHHHHHTT-EEEEEEESEEETTT----TB-HHHHHHHHTT-BEBCTTSSB-EEEETTEEEEE
T ss_pred --cccccccccccchHHHHHhHhhCCcEEEEEeecccCCCC----CcchhhhhHhhcCceeecccCCcccccccCCcccc
Confidence 279999999999999999999999999999999997542 14679999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHHHhc-CccEEEecCCCCC--------CCcceecCCCCcCcccCchhHHHHHHHHHHHHHHhh
Q 040705 524 LDLTHPDTASWFKQVLQEMVED-GVRGWMADFGEGL--------PVDAILYSGEDPISAHNRYPELWAQINREFVEEWKD 594 (850)
Q Consensus 524 ~DftnP~a~~Ww~~~l~~l~~~-Gvdg~w~D~gE~~--------p~d~~~~~G~~~~~~HN~Y~~l~aka~~e~~~~~~~ 594 (850)
||||||++++||+++++++++. ||||||+|+||+. +.|+.++++..+.++||.|+++++++.++++++..
T Consensus 147 ~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E~~~~~~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~~~~~~~~- 225 (441)
T PF01055_consen 147 IDFTNPEARDWWKEQLKELLDDYGVDGWWLDFGEPSSFDSNNTLPEDAVHHDGYSGYEMHNLYGLLYAKATYEALREID- 225 (441)
T ss_dssp B-TTSHHHHHHHHHHHHHHHTTST-SEEEEESTTTBSSTTTBSBCTTEECTTECEHHHHGGGHHHHHHHHHHHHHHHHS-
T ss_pred cCCCChhHHHHHHHHHHHHHhccCCceEEeecCCcccccccccCcccceecCCCCchheeccccccchhhhhhhhhhcc-
Confidence 9999999999999999999987 9999999999997 46777777788889999999999999999987642
Q ss_pred cccCccccCCCCceEEEEecccCCCCCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCcc
Q 040705 595 KCTGTKREDTEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLI 674 (850)
Q Consensus 595 ~~~~~~~~~~~~rpfilsRSg~aGsqry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~ 674 (850)
+++|||+++||+++|+|||++ +|+||+.++|+ +|+.+|+++|++|+||+|+||+|||||.+
T Consensus 226 ---------~~~r~~~~sRs~~~G~qr~~~-~w~GD~~s~w~---~L~~~i~~~l~~~~~G~~~~g~DigG~~~------ 286 (441)
T PF01055_consen 226 ---------PNKRPFIFSRSGWAGSQRYGG-HWSGDNSSSWD---GLRSSIPAMLNMGLSGYPFWGSDIGGFSG------ 286 (441)
T ss_dssp ---------TTSC-EEEESSEETTGGGTCE-EEECSSBSSHH---HHHHHHHHHHHHHCTT-SSEEEEET-SBS------
T ss_pred ---------CCCCcceeecccCCCCCccce-eecccccccHH---HHHHHHHHHHHHhhhhcceecCcccccCC------
Confidence 688999999999999999998 69999999996 69999999999999999999999999998
Q ss_pred ccCCChhHHHHHHHHhcccccccccCCCCCCCCCCCCCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCcccccccc
Q 040705 675 KYRRSEELLLRWMELNAFTTVFRTHEGNKPSFNSQFYSNQQTLSHFARFAK-VYRAWKFYRIKLVKEASQKGLPVCRHLF 753 (850)
Q Consensus 675 ~~~~s~EL~iRW~QlgaF~P~~R~H~~~~~~~~~~f~~~~~~~~~~~~~~~-ry~lL~pY~Ytl~~ea~~~G~Pi~RPL~ 753 (850)
.+++|||+||+|+|+|+|+||+|+......++||.+++++.++++++++ ||+++ ||+|+++++|+++|.||||||+
T Consensus 287 --~~~~eL~~RW~q~~~f~p~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~lRy~L~-PY~ys~~~~a~~~G~Pi~Rpl~ 363 (441)
T PF01055_consen 287 --DPDEELYIRWYQFGAFSPLFRNHGNKPSNPREPWSFGDEAEDIFRRAIRLRYRLL-PYIYSLAYEAHATGEPIMRPLF 363 (441)
T ss_dssp --TSSHHHHHHHHHHHTTSSSEEEEESTTSSB-SGGGSSCTHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHT--SEEEHH
T ss_pred --CCCHHHHHHHHHhhcCCcceeecCCcccccccccccchHHHHHHHHHHHHHHhHH-HHHHHHHHHHccCCCCcccccc
Confidence 5799999999999999999999965554445788777777778888876 55555 8999999999999999999999
Q ss_pred cCCCCChhhhcccCCeEEecCCeeEeeeecCCCceEEEEccCCCCCcEEEcCCCcEEecCCeEEEEEcCCCCCeEEEecC
Q 040705 754 LHYPDDDKVQRLSYQQFLVGTEILVVPILDKGKKKVRVYFPVGETSTWQHIWTEKIFTGQGSEAWVEAPIGYPAVFVKAD 833 (850)
Q Consensus 754 ~efP~D~~~~~i~~dQfmlG~~LLVAPVle~g~t~r~VYLP~~~~g~W~D~~Tg~~y~ggG~~~~v~apld~iPvFVR~G 833 (850)
++||+|+.+++++ +|||||++||||||+++|+++|+||||+ |.|||+|||++++ ||+++++++|++++|||||+|
T Consensus 364 ~~~p~d~~~~~~~-~q~m~G~~lLVaPV~~~g~~~~~vylP~---G~W~d~~tg~~~~-gg~~~~~~~~l~~~P~fvr~G 438 (441)
T PF01055_consen 364 WEFPNDPNAYDID-DQFMFGDDLLVAPVLEPGATSRTVYLPE---GTWYDFWTGEKYE-GGQTITVEAPLDEIPVFVRAG 438 (441)
T ss_dssp HHSTTSGGGGGTT-SSEEETTTEEEE---STTSSEEEEEESS---SEEEETTTCCEEE-SSEEEEEE--TTSCEEEEETT
T ss_pred cCCCccHhHhhcC-CccccCCCEEEEeeeeecccccEEECCC---CeEEECCCCCEEE-CCEEEEEeCCCCccCeEEECC
Confidence 9999999999997 8999999999999999999999999999 8999999999996 588999999999999999999
Q ss_pred eEe
Q 040705 834 SIV 836 (850)
Q Consensus 834 sII 836 (850)
+||
T Consensus 439 sii 441 (441)
T PF01055_consen 439 SII 441 (441)
T ss_dssp EEE
T ss_pred EeC
Confidence 998
No 7
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-97 Score=858.59 Aligned_cols=540 Identities=23% Similarity=0.373 Sum_probs=466.2
Q ss_pred cccCCCCCCceeceEEEEEEeC-CCCC-eEecCCCCC---CCCCCCCEEEeEeeccCCCCCCCccccccccccccCCCCC
Q 040705 245 ELKIPIPQHREFNRVFLTYSSE-GNER-FYGFGEQFS---HMDFKGKRVPIFVQEQGIGRGDQPITFAANLVSYRAGGDW 319 (850)
Q Consensus 245 ~l~~~~~~~~~~~~~~l~~~~~-~~E~-iYGlGE~~~---~~~~~g~~~~~~~~e~g~g~~d~p~~~~~n~~~y~~gg~~ 319 (850)
.|..+...++.|.+++|++++. ++|. +||+||+.. +-..++.++.||++|+.. |. ..
T Consensus 156 ~lfdTs~~~liF~DQflqlsT~LPs~~~iyG~gE~~~~~~~~~~~~~t~~l~~rd~~p-----------~~-------~~ 217 (805)
T KOG1065|consen 156 VLFDTSIGPLIFEDQFLQLSTYLPSENEIYGLGEHTHQSYRHDMNNLTWTLFARDYSP-----------NL-------PG 217 (805)
T ss_pred eeeecCCCceeeeeeeeeeeccCCCcccccccccccchhhhcccCCceeeeeecccCC-----------CC-------Cc
Confidence 5666778889999999999987 4666 999999642 446778999999986532 10 23
Q ss_pred cCCCCceeEEEEEc----ceEEEEecccceeeecCCcceEEEEEecceEEEEEEeCCCHHHHHHHHHHHhCCCCCCchhh
Q 040705 320 STTYAPSPFYMTSK----MRSVYLQGYDYSVFDLTRVDRVQIQIHGNSVQGRILHGNSPCELIEHFTETIGRPPELPDWI 395 (850)
Q Consensus 320 ~~~Y~~~Pf~~ss~----~~Gif~d~~~~~~fdl~~~~~v~~~~~gg~ld~y~~~G~tp~dvi~~Yt~LtGrp~lpP~Wa 395 (850)
.++|++|||||..+ ..|+|+-|+.-+.+-+...+.+++|+.||.+|+|+|+|++|+.|++||.+++|+|.|||+|+
T Consensus 218 ~NLYGshPfymcle~~~~~~GVflLnSNamEv~~~p~p~L~YR~iGGilD~y~flGptPe~vvqQy~q~iG~P~m~pYWs 297 (805)
T KOG1065|consen 218 VNLYGSHPFYLCLEDDSGAHGVFLLNSNAMEVTLRPGPSLTYRTIGGILDFYVFLGPTPEGVVQQYLQLIGRPAMPPYWS 297 (805)
T ss_pred ccccccccceeEeeccCCCceEEEeccCCceEEeccCCeeEEEeecceEEEEEecCCChHHHHHHHHHHhCCccCCchhh
Confidence 57999999999865 35777777666777777678899999999999999999999999999999999999999999
Q ss_pred ccceeeeec--CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceE
Q 040705 396 VSGAVAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKV 472 (850)
Q Consensus 396 ~~G~~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~ 472 (850)
+ ||++|++ .+.++++++++.++++|||+|++|.| |||+.++ |||+|+..||+.++++++||+.|+|+
T Consensus 298 l-Gf~~~RwgY~nls~~~dvv~~~~~agiPld~~~~DiDyMd~yk---------DFTvd~~~fp~~~~fv~~Lh~~G~ky 367 (805)
T KOG1065|consen 298 L-GFQLCRWGYKNLSVVRDVVENYRAAGIPLDVIVIDIDYMDGYK---------DFTVDKVWFPDLKDFVDDLHARGFKY 367 (805)
T ss_pred c-cceecccccccHHHHHHHHHHHHHcCCCcceeeeehhhhhccc---------ceeeccccCcchHHHHHHHHhCCCeE
Confidence 8 9999985 58999999999999999999999999 9997654 89999999999999999999999999
Q ss_pred EEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCe-eEecCCCCceEeccCCCHHHHHHHHHHHHHHHh-cCccEE
Q 040705 473 MTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQ-YLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVE-DGVRGW 550 (850)
Q Consensus 473 ~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~-y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~-~Gvdg~ 550 (850)
++|+||+|..++ .|-.|+++.++++||++.+|++ +.+.+||+.+++||||||++..||.+.++.+.+ .++||+
T Consensus 368 vliidP~is~~~-----~y~~y~~g~~~~v~I~~~~g~~~~lg~vwP~~~~fpDftnp~~~~Ww~~~~~~fh~~vp~dg~ 442 (805)
T KOG1065|consen 368 VLIIDPFISTNS-----SYGPYDRGVAKDVLIKNREGSPKMLGEVWPGSTAFPDFTNPAVVEWWLDELKRFHDEVPFDGF 442 (805)
T ss_pred EEEeCCccccCc-----cchhhhhhhhhceeeecccCchhhhcccCCCcccccccCCchHHHHHHHHHHhhcccCCccce
Confidence 999999997643 3788999999999999999998 778999999999999999999999999998875 799999
Q ss_pred EecCCCCCCCc-----ceecCCCC---cCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEEEEecccCCCCCc
Q 040705 551 MADFGEGLPVD-----AILYSGED---PISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPKW 622 (850)
Q Consensus 551 w~D~gE~~p~d-----~~~~~G~~---~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~aGsqry 622 (850)
|.||||+..+. .....+.. ..+.||+|+...+.+++.++.. .+++|+++++||+|+|+.||
T Consensus 443 wiDmnE~snf~~pp~~~~~~~~~~~~~tyd~~~lyg~~~aiat~~a~~~-----------v~~kr~~i~srsTf~g~g~y 511 (805)
T KOG1065|consen 443 WIDMNEPSNFPSPPINPTLDNGDLYAKTYDTHNLYGYSEAIATHQALVD-----------VPGKRSFILSRSTFVGSGRY 511 (805)
T ss_pred EEECCCcccCCCCCcccccccccccccchhhhhhHhHHHhhhhhcccee-----------ccccccccccccceeccccc
Confidence 99999996543 22222221 1468999999999888766643 25899999999999999999
Q ss_pred ccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHHhcccccccccCCC
Q 040705 623 GMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTHEGN 702 (850)
Q Consensus 623 ~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~QlgaF~P~~R~H~~~ 702 (850)
++ ||+|||.++|+. |+.+|.+||+++|+|+|++|+|||||.+ .++||||.||+|+|||+|+||+|+..
T Consensus 512 ~~-hwlgdn~~~w~~---L~~sI~gml~fnl~Gip~Vg~Dicgf~~--------~~~eELc~RW~q~gaF~Pf~R~hn~~ 579 (805)
T KOG1065|consen 512 AG-HWLGDNTARWED---LQTSISGMLEFNLFGIPMVGSDICGFLG--------PPTEELCLRWLQLGAFYPFSRNHNSP 579 (805)
T ss_pred ce-eecccccceehh---ccccchhhhcccccCCCccchhhhcCCC--------CCCHHHHHHHHHhccCCchhhccCCC
Confidence 98 999999999975 9999999999999999999999999998 68999999999999999999999876
Q ss_pred CCCCCCCCCCchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCcccccccccCCCCChhhhcccCCeEEecCCeeEeee
Q 040705 703 KPSFNSQFYSNQQTLSHFARFA-KVYRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEILVVPI 781 (850)
Q Consensus 703 ~~~~~~~f~~~~~~~~~~~~~~-~ry~lL~pY~Ytl~~ea~~~G~Pi~RPL~~efP~D~~~~~i~~dQfmlG~~LLVAPV 781 (850)
...++++..... .....++++ .||.+| ||+|+|+++||..|.||+||||++||+|++++.++ +|||+|++||||||
T Consensus 580 ~~~~qe~~~~~s-v~~a~r~~~~~ry~~l-P~lytl~~~A~~sG~pV~RPlf~~fP~D~~~~~v~-~qFl~G~~llvaPv 656 (805)
T KOG1065|consen 580 GEPRQEPYTWSS-VAEAARNALTLRYTLL-PYLYTLFYRAHVSGEPVARPLFFEFPTDPATLIVS-DQFLWGESLLVAPV 656 (805)
T ss_pred CCcccChhhHHH-HHHHHHHhhhheeeeh-hhHHHhhhhhhhcCCcceeeeeeecCCChhhhccc-ceeEeccccccccc
Confidence 544444433222 222233333 467777 79999999999999999999999999999999997 89999999999999
Q ss_pred ecCCCceEEEEccCCCCCcEEEcCCCcEEecCCeEEEEEcCCCCCeEEEecCeEeecchhhcccc
Q 040705 782 LDKGKKKVRVYFPVGETSTWQHIWTEKIFTGQGSEAWVEAPIGYPAVFVKADSIVGETFRKNLRN 846 (850)
Q Consensus 782 le~g~t~r~VYLP~~~~g~W~D~~Tg~~y~ggG~~~~v~apld~iPvFVR~GsIIP~~~~~~l~~ 846 (850)
|++|+++|++|||. |.|||.+++....+....++..+|+++||+|+|+|.|||+|-.+-+.+
T Consensus 657 l~~g~~~v~~y~P~---g~Wyd~~~~~~~~~~~~~~~~~~p~d~i~v~~r~g~ilp~q~~~l~~a 718 (805)
T KOG1065|consen 657 LYQGATEVEAYLPQ---GVWYDGFDGSYRVGSKWMVTYAAPLDKIPVFLRGGYILPMQQFELLVA 718 (805)
T ss_pred hhcCceEEEEEccC---ceeeecCCcceEeeeecccccCCchhhccchhccCceeeecccceeee
Confidence 99999999999999 899999999988655445778899999999999999999998554443
No 8
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=100.00 E-value=5.3e-79 Score=675.26 Aligned_cols=332 Identities=22% Similarity=0.426 Sum_probs=302.4
Q ss_pred CCCCCCchhhccceeeeec--CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcCh--HH
Q 040705 386 GRPPELPDWIVSGAVAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGW--KQ 460 (850)
Q Consensus 386 Grp~lpP~Wa~~G~~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp--~~ 460 (850)
|||+|||+||| |+|+|.+ .++++|+++++++|+++||||++||| +|++.. ++|+||+++|||| ++
T Consensus 1 G~p~lpP~wal-G~~~s~~~y~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~~---------~~f~~d~~~FPdp~~~~ 70 (339)
T cd06602 1 GRPAMPPYWAL-GFHLCRWGYKNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRR---------RDFTLDPVRFPGLKMPE 70 (339)
T ss_pred CCCCCCchHHh-hhHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECcccccCc---------cceecccccCCCccHHH
Confidence 89999999998 9998864 58999999999999999999999999 887542 3899999999999 99
Q ss_pred HHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHH
Q 040705 461 LLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQ 540 (850)
Q Consensus 461 mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~ 540 (850)
||++||++|+|+++|++|+|...+ ..++++.|+|++++|+||++.+|+++++.+|+|.++++|||||+|++||+++++
T Consensus 71 mi~~L~~~G~k~~~~i~P~v~~~~--~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~ 148 (339)
T cd06602 71 FVDELHANGQHYVPILDPAISANE--PTGSYPPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPDFLNPNTQEWWTDEIK 148 (339)
T ss_pred HHHHHHHCCCEEEEEEeCccccCc--CCCCCHHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcCCCCHHHHHHHHHHHH
Confidence 999999999999999999997532 124689999999999999999999999999999999999999999999999999
Q ss_pred HHHh-cCccEEEecCCCCCCCcceecCCCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEEEEecccCCC
Q 040705 541 EMVE-DGVRGWMADFGEGLPVDAILYSGEDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDS 619 (850)
Q Consensus 541 ~l~~-~Gvdg~w~D~gE~~p~d~~~~~G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~aGs 619 (850)
++++ .||||||+||||+.++ .++||.|++++++++++++++. +++|+|+++||+|+|+
T Consensus 149 ~~~~~~Gvdg~w~D~~Ep~~~----------~~~hN~y~~~~~~~~~~~~~~~-----------~~~r~~~~sRs~~~G~ 207 (339)
T cd06602 149 DFHDQVPFDGLWIDMNEPSNF----------YDVHNLYGLSEAIATYKALQSI-----------PGKRPFVISRSTFPGS 207 (339)
T ss_pred HHHhcCCCcEEEecCCCCchH----------hhhcchhhHHHHHHHHHHHHhc-----------CCCCCEEEEecCcccc
Confidence 8775 7999999999998654 4799999999999999988753 5789999999999999
Q ss_pred CCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHHhccccccccc
Q 040705 620 PKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTH 699 (850)
Q Consensus 620 qry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~QlgaF~P~~R~H 699 (850)
|||++ +|+||+.|+|+ +|+.+|+++|++|+||+||||+|||||.+ .+++|||+||+|+|+|+|+||+|
T Consensus 208 qry~~-~w~GD~~s~W~---~L~~~i~~~l~~~~sG~~~~~~DigGf~g--------~~~~EL~~RW~Q~~~f~P~~r~H 275 (339)
T cd06602 208 GRYAG-HWLGDNASTWE---DLRYSIIGMLEFNLFGIPMVGADICGFNG--------DTTEELCARWMQLGAFYPFSRNH 275 (339)
T ss_pred cccce-eECCCccCCHH---HHHHHHHHHHHHHhcCCCcccCCCCCCCC--------CCCHHHHHHHHHHHhhCceeecc
Confidence 99996 89999999998 69999999999999999999999999998 57999999999999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCcccccccccCCCCChhhh
Q 040705 700 EGNKPSFNSQFYSNQQTLSHFARFAK-VYRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQ 763 (850)
Q Consensus 700 ~~~~~~~~~~f~~~~~~~~~~~~~~~-ry~lL~pY~Ytl~~ea~~~G~Pi~RPL~~efP~D~~~~ 763 (850)
+.+....++||.++.++..+++++++ ||+++ ||+|+++.+|+++|.||||||+++||+|+++|
T Consensus 276 ~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~L~-PYlys~~~~a~~~G~Pi~RPl~~~~p~D~~~~ 339 (339)
T cd06602 276 NDIGAIPQEPYVWGPSVADAARKALNIRYSLL-PYLYTLFYEAHTSGTTVVRPLFFEFPSDPNTY 339 (339)
T ss_pred CCCCCCCcCCccCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCchhhhhhccCCCCcccC
Confidence 98765556788887778888888876 56655 89999999999999999999999999999874
No 9
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=100.00 E-value=1.8e-74 Score=633.73 Aligned_cols=314 Identities=58% Similarity=1.032 Sum_probs=286.1
Q ss_pred CCCCCCchhhccceeee-ecCCHHHHHHHHHHHHhCCCCceeEEecccccccccccCceeeeeeeecCCCCcChHHHHHH
Q 040705 386 GRPPELPDWIVSGAVAG-MQGGTDAVRRVWDALRSYQVPVSAFWLQDWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKD 464 (850)
Q Consensus 386 Grp~lpP~Wa~~G~~lg-~~~s~~~V~~v~~~~r~~~IP~D~i~lDdw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~ 464 (850)
|+++|||+||+ |+|++ +++++++|+++++++++++||||++|||||++...+++|.++|++|+||+++||||++||++
T Consensus 1 G~~p~~P~wa~-G~~~~~~~~s~~~v~~~~~~~~~~~iP~d~i~lddw~~~~~~~~g~~~~~~f~~d~~~FPdp~~mi~~ 79 (317)
T cd06594 1 GRQPELPDWAY-GGAILGLQGGTDKVLEALEKARAAGVKVAGLWLQDWTGRRETSFGDRLWWNWEWDPERYPGLDELIEE 79 (317)
T ss_pred CCCCCCchhhh-CcEEeeeeCCHHHHHHHHHHHHHcCCCeeEEEEccccCcccccccceeeeeeEEChhhCCCHHHHHHH
Confidence 89999999998 76655 56699999999999999999999999999987655667777888999999999999999999
Q ss_pred HHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHH-H
Q 040705 465 LNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEM-V 543 (850)
Q Consensus 465 Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l-~ 543 (850)
||++|+|+++|++|+|..++ ...|+++.++||||++++|++|++.+|++.+++||||||+|++||.++++++ .
T Consensus 80 Lh~~G~~~~~~i~P~v~~~~------~~~y~~~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~ 153 (317)
T cd06594 80 LKARGIRVLTYINPYLADDG------PLYYEEAKDAGYLVKDADGSPYLVDFGEFDCGVLDLTNPAARDWFKQVIKEMLL 153 (317)
T ss_pred HHHCCCEEEEEecCceecCC------chhHHHHHHCCeEEECCCCCeeeeccCCCCceeeecCCHHHHHHHHHHHHHHhh
Confidence 99999999999999996431 2237999999999999999999999999999999999999999999999887 6
Q ss_pred hcCccEEEecCCCCCCCcceecCCCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEEEEecccCCCCCcc
Q 040705 544 EDGVRGWMADFGEGLPVDAILYSGEDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPKWG 623 (850)
Q Consensus 544 ~~Gvdg~w~D~gE~~p~d~~~~~G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~aGsqry~ 623 (850)
+.||||||+||||++|.|..+++|.++.++||.|+++|++++++++++.. +++|||++|||+|+|+|||+
T Consensus 154 ~~Gvdg~w~D~~E~~p~d~~~~~g~~~~~~hN~y~~~~~~~~~~~~~~~~----------~~~r~fvltRs~~~Gsqry~ 223 (317)
T cd06594 154 DLGLSGWMADFGEYLPFDAVLHSGEDAATMHNRYPELWAKLNREAVEEAG----------KTGDILFFMRSGFTGSQKYS 223 (317)
T ss_pred hcCCcEEEecCCCCCCCcceecCCCCHHHHhhHHHHHHHHHHHHHHHHhc----------cCCCeEEEEccccccccccc
Confidence 89999999999999999998888988899999999999999999987642 67899999999999999998
Q ss_pred cccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHHhcccccccccCCCC
Q 040705 624 MLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTHEGNK 703 (850)
Q Consensus 624 ~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~QlgaF~P~~R~H~~~~ 703 (850)
+++|+||+.|+|+.++||+.+|+++|++||||+||||+|||||.+... ..+++|||+||+|+|+|+|+||+|+.+.
T Consensus 224 ~~~WsGD~~s~W~~~~~L~~~i~~~L~~~lsG~~~~g~DIGGF~~~~~----~~~~~EL~~RW~Q~gaF~P~~R~H~~~~ 299 (317)
T cd06594 224 TLFWAGDQMVSWDAHDGLKSVVPGALSSGLSGYALHHSDIGGYTSLNG----YVRTEELLLRWAEMAAFTPVMRTHEGNR 299 (317)
T ss_pred ccccCCCCCCCCcCcccHHHHHHHHhhccccCCCcccCccCCCcCCCC----CCCCHHHHHHHHHHhccccceecCCCCC
Confidence 768999999999977789999999999999999999999999986311 1589999999999999999999999999
Q ss_pred CCCCCCCCCchHHHHHH
Q 040705 704 PSFNSQFYSNQQTLSHF 720 (850)
Q Consensus 704 ~~~~~~f~~~~~~~~~~ 720 (850)
++.++||++++++++++
T Consensus 300 ~~~~~~~~~~~~~~~~~ 316 (317)
T cd06594 300 PDDNWQFYSDDETLRHF 316 (317)
T ss_pred CCCCcccccChHHHHhh
Confidence 99999999998887654
No 10
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=100.00 E-value=2.7e-74 Score=638.93 Aligned_cols=322 Identities=30% Similarity=0.483 Sum_probs=291.2
Q ss_pred CCCCCCchhhccceeeeec--CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHH
Q 040705 386 GRPPELPDWIVSGAVAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLL 462 (850)
Q Consensus 386 Grp~lpP~Wa~~G~~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi 462 (850)
|||+|||+|++ |+|+|.+ .++++|+++++++|+++||||++||| +|+..+ .+|+||+++||||++|+
T Consensus 1 G~p~l~P~wal-G~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~---------~~f~~d~~~fPdp~~m~ 70 (339)
T cd06604 1 GRPPLPPKWAL-GYQQSRWSYYPEEEVREIADEFRERDIPCDAIYLDIDYMDGY---------RVFTWDKERFPDPKELI 70 (339)
T ss_pred CCCCCCchHHH-hHHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECchhhCCC---------CceeeccccCCCHHHHH
Confidence 89999999998 9998864 48999999999999999999999999 887432 27999999999999999
Q ss_pred HHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHH
Q 040705 463 KDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEM 542 (850)
Q Consensus 463 ~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l 542 (850)
++||++|+|+++|++|+|.. +..+++|+|++++|+||++.+|+++++.+|++.+++||||||+|++||.++++++
T Consensus 71 ~~l~~~g~~~~~~~~P~v~~-----~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~ 145 (339)
T cd06604 71 KELHEQGFKVVTIIDPGVKV-----DPGYDVYEEGLENDYFVKDPDGELYIGRVWPGLSAFPDFTNPKVREWWGSLYKKF 145 (339)
T ss_pred HHHHHCCCEEEEEEeCceeC-----CCCChHHHHHHHCCeEEECCCCCEEEEEecCCCccccCCCChHHHHHHHHHHHHH
Confidence 99999999999999999964 2357899999999999999999999999999999999999999999999999999
Q ss_pred HhcCccEEEecCCCCC----------CCcceecCC---CCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceE
Q 040705 543 VEDGVRGWMADFGEGL----------PVDAILYSG---EDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLV 609 (850)
Q Consensus 543 ~~~Gvdg~w~D~gE~~----------p~d~~~~~G---~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpf 609 (850)
++.||||||+||||+. |.|+.++.+ .++.++||.|++++++++++++++.. +++|+|
T Consensus 146 ~~~Gvdg~w~D~~Ep~~~~~~~~~~~p~~~~~~~~~~~~~~~~~hn~y~~~~~~a~~~~~~~~~----------~~~r~~ 215 (339)
T cd06604 146 VDLGVDGIWNDMNEPAVFNTPGKTTMPRDAVHRLDGGGGTHEEVHNVYGLLMARATYEGLKKAR----------PNERPF 215 (339)
T ss_pred hhCCCceEeecCCCccccCCcccccCCccceeeCCCCCCcHhHhcchhhHHHHHHHHHHHHHhC----------CCCCcE
Confidence 9999999999999985 445544432 26789999999999999999988743 678999
Q ss_pred EEEecccCCCCCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHH
Q 040705 610 FFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMEL 689 (850)
Q Consensus 610 ilsRSg~aGsqry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~Ql 689 (850)
+++||+|+|+|||+. +|+||+.++|+ +|+.+|+++|++|++|+||||+|||||.+ .+++|||+||+|+
T Consensus 216 ~~sRs~~~G~qry~~-~W~GD~~ssW~---~L~~~i~~~l~~~l~G~~~~g~DIGGf~~--------~~~~EL~~RW~Q~ 283 (339)
T cd06604 216 ILTRAGYAGIQRYAA-VWTGDNRSSWE---HLRLSIPMLLNLGLSGVPFVGADIGGFGG--------DPSPELLVRWMQL 283 (339)
T ss_pred EEEeccccccccccc-ccCCcccCCHH---HHHHHHHHHHHHHhcCCcccccccCCCCC--------CCCHHHHHHHHHH
Confidence 999999999999997 89999999997 69999999999999999999999999997 6899999999999
Q ss_pred hcccccccccCCCCCCCCCCCCCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Q 040705 690 NAFTTVFRTHEGNKPSFNSQFYSNQQTLSHFARFAK-VYRAWKFYRIKLVKEASQKG 745 (850)
Q Consensus 690 gaF~P~~R~H~~~~~~~~~~f~~~~~~~~~~~~~~~-ry~lL~pY~Ytl~~ea~~~G 745 (850)
|+|+|+||+|+.+....++||.++++++.+++++++ ||++| ||+|+++++|+++|
T Consensus 284 g~f~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~Ll-PY~ysl~~~a~~tG 339 (339)
T cd06604 284 GAFFPFFRNHSAKGTRDQEPWAFGEEVEEIAREAIKLRYRLL-PYLYTLFWEASETG 339 (339)
T ss_pred HhccchhhccCCCCCCCCCCeecChHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcC
Confidence 999999999998665667888887788888898886 56665 89999999999998
No 11
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=100.00 E-value=2.6e-74 Score=633.00 Aligned_cols=312 Identities=24% Similarity=0.402 Sum_probs=285.3
Q ss_pred CCCCCCchhhccceeeeec--CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHH
Q 040705 386 GRPPELPDWIVSGAVAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLL 462 (850)
Q Consensus 386 Grp~lpP~Wa~~G~~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi 462 (850)
|+|+|||+||+ |+|+|++ .++++|+++++++++++||||++||| +|++.+ .+|+||+++||||++|+
T Consensus 1 G~~~lpP~wal-G~~~sr~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~---------~~f~~d~~~FPdp~~~i 70 (317)
T cd06600 1 GKPALPPMWAL-GYHISRYSYYPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSY---------RLFTWDPYRFPEPKKLI 70 (317)
T ss_pred CCCCCCchHHH-HHHhcCCCCCCHHHHHHHHHHHHHcCCCcceEEEChhhhCCC---------CceeechhcCCCHHHHH
Confidence 89999999998 9999864 58999999999999999999999999 887532 27999999999999999
Q ss_pred HHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHH
Q 040705 463 KDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEM 542 (850)
Q Consensus 463 ~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l 542 (850)
++||++|+|+++|++|+|..+ ..++.|+++.++|+||++.+|+++++.+|+|.+++||||||+|++||.+.++++
T Consensus 71 ~~l~~~g~k~~~~~~P~i~~~-----~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dftnp~a~~ww~~~~~~~ 145 (317)
T cd06600 71 DELHKRNVKLVTIVDPGIRVD-----QNYSPFLSGMDKGKFCEIESGELFVGKMWPGTTVYPDFTNPDTREWWAGLFSEW 145 (317)
T ss_pred HHHHHCCCEEEEEeeccccCC-----CCChHHHHHHHCCEEEECCCCCeEEEeecCCCccccCCCChHHHHHHHHHHHHH
Confidence 999999999999999999643 357889999999999999999999999999999999999999999999999988
Q ss_pred H-hcCccEEEecCCCCCCCcceecCCCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEEEEecccCCCCC
Q 040705 543 V-EDGVRGWMADFGEGLPVDAILYSGEDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPK 621 (850)
Q Consensus 543 ~-~~Gvdg~w~D~gE~~p~d~~~~~G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~aGsqr 621 (850)
+ +.||||||+||||+..+ .++||+|++++++++++++++.. +++|||+++||+|+|+||
T Consensus 146 ~~~~gvdg~w~D~~Ep~~~----------~~~hn~y~~~~~~a~~~~~~~~~----------~~~r~~~~sRs~~~G~qr 205 (317)
T cd06600 146 LNSQGVDGIWLDMNEPSDF----------EKVHNLYGLYEAMATAEGFRTSH----------PRNRIFILTRSGFAGSQK 205 (317)
T ss_pred hhcCCCceEEeeCCCCccH----------HHhcchhhHHHHHHHHHHHHHhc----------CCCCceEEEeccccccCC
Confidence 7 79999999999998643 47999999999999999987642 678999999999999999
Q ss_pred cccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHHhcccccccccCC
Q 040705 622 WGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTHEG 701 (850)
Q Consensus 622 y~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~QlgaF~P~~R~H~~ 701 (850)
|+. +|+||+.|+|+ +|+.+|+++|++||||+||||+|||||.+ ++++|||+||+|+|+|+|+||+|+.
T Consensus 206 y~~-~W~GD~~s~W~---~L~~~i~~~l~~gl~G~p~~g~DiGGf~~--------~~~~EL~~RW~Q~gaf~P~~R~H~~ 273 (317)
T cd06600 206 YAA-IWTGDNTASWD---DLKLSIPLVLGLSISGIPFVGCDIGGFQG--------DNSMELLVRWYQLGAFFPFYRSHKA 273 (317)
T ss_pred ccc-eECCcccccHH---HHHHHHHHHHHHHhcCCCccCcccCCCCC--------CCCHHHHHHHHHHhhcCceeeccCC
Confidence 996 89999999997 59999999999999999999999999998 5799999999999999999999998
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Q 040705 702 NKPSFNSQFYSNQQTLSHFARFAK-VYRAWKFYRIKLVKEASQKG 745 (850)
Q Consensus 702 ~~~~~~~~f~~~~~~~~~~~~~~~-ry~lL~pY~Ytl~~ea~~~G 745 (850)
.....++||.++++++.+++++++ ||+++ ||+||++++||++|
T Consensus 274 ~~~~~~ePw~~~~~~~~~~r~~~~lRy~Ll-PYlytl~~~a~~~G 317 (317)
T cd06600 274 TDGKDTEPVFFPDYYKEKVREIVELRYKLL-PYLYTLFLRAHEKG 317 (317)
T ss_pred CCCCCCCCeecCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcC
Confidence 776667888888788888898886 56665 89999999999988
No 12
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=100.00 E-value=9.1e-74 Score=634.55 Aligned_cols=323 Identities=22% Similarity=0.366 Sum_probs=292.6
Q ss_pred CCCCCCchhhccceeeeec--CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHH
Q 040705 386 GRPPELPDWIVSGAVAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLL 462 (850)
Q Consensus 386 Grp~lpP~Wa~~G~~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi 462 (850)
|+|+|||+||| |+|+|++ .++++|+++++++++++||||++||| +|+... + +|+||+++||||++|+
T Consensus 1 G~~~lpP~wal-G~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~------~---~f~~d~~~FPdp~~mi 70 (339)
T cd06603 1 GRPPLPPLFSL-GYHQCRWNYKDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGK------R---YFTWDKKKFPDPEKMQ 70 (339)
T ss_pred CCCCCCchHHH-HHHhcCCCCCCHHHHHHHHHHHHHcCCCceEEEEChHHhCCC------C---ceEeCcccCCCHHHHH
Confidence 89999999998 9999864 58999999999999999999999999 787432 1 6999999999999999
Q ss_pred HHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHH
Q 040705 463 KDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEM 542 (850)
Q Consensus 463 ~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l 542 (850)
++||++|+|+++|++|+|..+ ..+++|+|++++|||||+.+|++|.+.+|++.+++||||||+|++||++.++++
T Consensus 71 ~~L~~~G~k~~~~~~P~v~~~-----~~~~~y~e~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~ 145 (339)
T cd06603 71 EKLASKGRKLVTIVDPHIKRD-----DGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYD 145 (339)
T ss_pred HHHHHCCCEEEEEecCceecC-----CCCHHHHHHHHCCeEEECCCCCEEEEEECCCCcCCccCCChhHHHHHHHHHHHH
Confidence 999999999999999999642 358999999999999999999999999999999999999999999999999988
Q ss_pred Hh---cCccEEEecCCCCC---------CCcceecCCCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEE
Q 040705 543 VE---DGVRGWMADFGEGL---------PVDAILYSGEDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVF 610 (850)
Q Consensus 543 ~~---~Gvdg~w~D~gE~~---------p~d~~~~~G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfi 610 (850)
+. .|++|||+|||||. |.|+.+++|.++.++||.|++++++++++++.+.. ..++|||+
T Consensus 146 ~~~~~~g~~g~w~D~~Ep~~f~~~~~~~p~d~~~~~~~~~~~~hN~y~~~~~~a~~e~~~~~~---------~~~~r~~~ 216 (339)
T cd06603 146 KYKGSTENLYIWNDMNEPSVFNGPELTMPKDAIHYGGIEHREVHNIYGLYMHMATFDGLLKRS---------EGNKRPFV 216 (339)
T ss_pred hhcccCCCceEEeccCCccccCCCCCcCCCcceecCCCcHHHHhhHhHHHHHHHHHHHHHHhh---------ccCCceEE
Confidence 74 68999999999974 55677777788899999999999999999987643 13689999
Q ss_pred EEecccCCCCCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHHh
Q 040705 611 FMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELN 690 (850)
Q Consensus 611 lsRSg~aGsqry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~Qlg 690 (850)
++||+|+|+|||++ +|+||+.++|+ +|+.+|+++|++|+||+||||+|||||.+ .+++|||+||+|+|
T Consensus 217 ~sRs~~~G~qry~~-~W~GD~~s~W~---~L~~~i~~~L~~~l~G~~~~g~DiGGf~~--------~~~~EL~~RW~Q~g 284 (339)
T cd06603 217 LTRSFFAGSQRYAA-IWTGDNTATWE---HLKISIPMLLSLNICGIPFCGADVGGFFG--------NPDEELLVRWYQAG 284 (339)
T ss_pred EEecccccccceee-eeCCCccCCHH---HHHHHHHHHHHHhhcCccccCCccCCcCC--------CCCHHHHHHHHHHh
Confidence 99999999999997 89999999998 59999999999999999999999999987 57999999999999
Q ss_pred cccccccccCCCCCCCCCCCCCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Q 040705 691 AFTTVFRTHEGNKPSFNSQFYSNQQTLSHFARFAK-VYRAWKFYRIKLVKEASQKG 745 (850)
Q Consensus 691 aF~P~~R~H~~~~~~~~~~f~~~~~~~~~~~~~~~-ry~lL~pY~Ytl~~ea~~~G 745 (850)
+|+|+||+|+...+..++||.+++++..+++++++ ||+++ ||+|+++++|+.+|
T Consensus 285 af~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~Ll-PYlys~~~~a~~tG 339 (339)
T cd06603 285 AFYPFFRAHAHIDTKRREPWLFGEEYTSIIREAIRLRYALL-PYWYTLFYEASVTG 339 (339)
T ss_pred hcCceeecCCCCCCCCCCCeecChHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcC
Confidence 99999999998776677899888888888888886 56655 89999999999998
No 13
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.3e-69 Score=596.00 Aligned_cols=308 Identities=28% Similarity=0.476 Sum_probs=271.8
Q ss_pred CCCCCCchhhccceeeeec--CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHH
Q 040705 386 GRPPELPDWIVSGAVAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLL 462 (850)
Q Consensus 386 Grp~lpP~Wa~~G~~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi 462 (850)
|+|+|||+|++ |+|+|.+ .++++|+++++++|+++||||++||| +|++.+.. ...+++|+||+++||||++|+
T Consensus 1 G~~~l~P~wa~-G~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~---~~~~~~f~wd~~~FPdp~~mi 76 (317)
T cd06598 1 GRQPLPPRWAL-GNWASRFGYRNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDID---KGHMGNLDWDRKAFPDPAGMI 76 (317)
T ss_pred CCCCCCchHHH-HHHHhcCCCCCHHHHHHHHHHHHHhCCCceEEEEechhhcCccc---CCceeeeEeccccCCCHHHHH
Confidence 89999999998 9998864 48999999999999999999999999 89865421 123458999999999999999
Q ss_pred HHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCc-EEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHH
Q 040705 463 KDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDI-LVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQE 541 (850)
Q Consensus 463 ~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~-fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~ 541 (850)
++||++|+|+++|++|+|.. +++.|+|++++|+ +++..+|+++++.+|++.+++||||||+|++||++.+++
T Consensus 77 ~~L~~~G~k~~~~v~P~v~~-------~~~~y~e~~~~g~l~~~~~~~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~ 149 (317)
T cd06598 77 ADLAKKGVKTIVITEPFVLK-------NSKNWGEAVKAGALLKKDQGGVPTLFDFWFGNTGLIDWFDPAAQAWFHDNYKK 149 (317)
T ss_pred HHHHHcCCcEEEEEcCcccC-------CchhHHHHHhCCCEEEECCCCCEeeeeccCCCccccCCCCHHHHHHHHHHHHH
Confidence 99999999999999999963 3678999999999 556667899999999999999999999999999999999
Q ss_pred HHhcCccEEEecCCCCC--CCcceecCCCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEEEEecccCCC
Q 040705 542 MVEDGVRGWMADFGEGL--PVDAILYSGEDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDS 619 (850)
Q Consensus 542 l~~~Gvdg~w~D~gE~~--p~d~~~~~G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~aGs 619 (850)
+.+.||||||+||||+. |.|..++.| .+.++||.|+++|++++++++++.. +++|||+++||+|+|+
T Consensus 150 ~~~~Gvdg~w~D~~Ep~~~~~~~~~~~g-~~~~~hN~y~~~~~~~~~e~~~~~~----------~~~r~~~~~Rs~~~Gs 218 (317)
T cd06598 150 LIDQGVTGWWGDLGEPEVHPPDMCHHKG-KAAEVHNIYGHLWAKSIYEGYQQNY----------PNERPFILMRAGFAGS 218 (317)
T ss_pred hhhCCccEEEecCCCccccCCccccCCC-cHhHHhhHHHHHHHHHHHHHHHHhc----------CCCCeEEEEecCcCcc
Confidence 99999999999999984 556665555 4678999999999999999987642 6789999999999999
Q ss_pred CCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHHhccccccccc
Q 040705 620 PKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTH 699 (850)
Q Consensus 620 qry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~QlgaF~P~~R~H 699 (850)
|||++++|+||+.++|+ +|+.+|+++|++|+||+||||+|||||.+.. .+++|||+||+|+|+|+|+||+|
T Consensus 219 qry~~~~WsGD~~s~W~---~L~~~i~~~l~~~l~G~~~~g~DIGGf~~~~------~~~~EL~~RW~q~g~f~P~~R~H 289 (317)
T cd06598 219 QRYGVIPWSGDVGRTWD---GLKSQPNAALQMSMSGIDYYHSDIGGFAGGD------ELDPELYTRWFQYGAFDPPFRPH 289 (317)
T ss_pred ccCcCCccCCCCcCCHH---HHHHHHHHHHhhhccCCcccCCCcCCcCCCC------CCCHHHHHHHHHhccCCcccccC
Confidence 99986689999999997 6999999999999999999999999999831 37999999999999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHH
Q 040705 700 EGNKPSFNSQFYSNQQTLSHFARFAK 725 (850)
Q Consensus 700 ~~~~~~~~~~f~~~~~~~~~~~~~~~ 725 (850)
+.+... .+||.+++++.++++++++
T Consensus 290 ~~~~~~-~ePw~~~~~~~~~~r~~~~ 314 (317)
T cd06598 290 AQNAIP-PEPVFYSIGTKNINRENIR 314 (317)
T ss_pred CCCCCC-CCCCcCChHHHHHHHHHHH
Confidence 987643 4577777777777777654
No 14
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=9.3e-69 Score=587.54 Aligned_cols=300 Identities=29% Similarity=0.553 Sum_probs=274.9
Q ss_pred CCCCCCchhhccceeeeec--CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHH
Q 040705 386 GRPPELPDWIVSGAVAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLL 462 (850)
Q Consensus 386 Grp~lpP~Wa~~G~~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi 462 (850)
|+|+|||+||+ |+|+|.+ .++++|+++++++++++||||++||| +|+... .+++|+||+++|||+++|+
T Consensus 1 G~~~l~P~wa~-G~~~~~~~y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~-------~~~~f~~d~~~FPd~~~~i 72 (308)
T cd06593 1 GRPALPPAWSF-GLWLSRSFYYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEF-------QWCDFEFDPDRFPDPEGML 72 (308)
T ss_pred CCCCCCchHHH-HHHHHcccCCCHHHHHHHHHHHHHcCCCeeEEEEecccccCC-------cceeeEECcccCCCHHHHH
Confidence 89999999998 9998874 58999999999999999999999999 798321 2358999999999999999
Q ss_pred HHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHH
Q 040705 463 KDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEM 542 (850)
Q Consensus 463 ~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l 542 (850)
++||++|+|+++|++|+|.. ++++|+|++++|+||++.+|+++...+|++.+++||||||+|++||+++++++
T Consensus 73 ~~l~~~G~~~~~~~~P~i~~-------~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~ 145 (308)
T cd06593 73 SRLKEKGFKVCLWINPYIAQ-------KSPLFKEAAEKGYLVKKPDGSVWQWDLWQPGMGIIDFTNPDACKWYKDKLKPL 145 (308)
T ss_pred HHHHHCCCeEEEEecCCCCC-------CchhHHHHHHCCeEEECCCCCeeeecccCCCcccccCCCHHHHHHHHHHHHHH
Confidence 99999999999999999963 35789999999999999999999988999999999999999999999999999
Q ss_pred HhcCccEEEecCCCCCCCcceecCCCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEEEEecccCCCCCc
Q 040705 543 VEDGVRGWMADFGEGLPVDAILYSGEDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPKW 622 (850)
Q Consensus 543 ~~~Gvdg~w~D~gE~~p~d~~~~~G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~aGsqry 622 (850)
++.||||||+||||++|.|+.+++|.++.++||.|+++++++++|++++.. +++|||+++||+|+|+|||
T Consensus 146 ~~~Gid~~~~D~~e~~p~~~~~~~g~~~~~~hn~y~~~~~~~~~~~~~~~~----------~~~r~~~~~Rs~~~Gsqry 215 (308)
T cd06593 146 LDMGVDCFKTDFGERIPTDVVYYDGSDGEKMHNYYALLYNKAVYEATKEVK----------GEGEAVVWARSAWAGSQKY 215 (308)
T ss_pred HHhCCcEEecCCCCCCCccccccCCCCcceeeeHHHHHHHHHHHHHHHHhc----------CCCCeEEEEcCCccccccC
Confidence 999999999999999999998888988999999999999999999987753 5678999999999999999
Q ss_pred ccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHHhcccccccccCCC
Q 040705 623 GMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTHEGN 702 (850)
Q Consensus 623 ~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~QlgaF~P~~R~H~~~ 702 (850)
+. +|+||+.++|+ +|+.+|+++|++|++|+||+|+|||||.+ .+++|||+||+|+|||+|+||+|+..
T Consensus 216 ~~-~w~GD~~s~w~---~L~~~i~~~l~~~l~G~~~~g~DigGf~~--------~~~~EL~~RW~q~gaf~P~~r~h~~~ 283 (308)
T cd06593 216 PV-HWGGDCESTFE---GMAESLRGGLSLGLSGFGFWSHDIGGFEG--------TPPPDLYKRWAQFGLLSSHSRLHGSG 283 (308)
T ss_pred CC-EECCCcccCHH---HHHHHHHHHHhccccCCceecCccCCcCC--------CCCHHHHHHHHHhCcCCcccccCCCC
Confidence 96 89999999996 69999999999999999999999999998 67999999999999999999999875
Q ss_pred CCCCCCCCCCchHHHHHHHHHHH
Q 040705 703 KPSFNSQFYSNQQTLSHFARFAK 725 (850)
Q Consensus 703 ~~~~~~~f~~~~~~~~~~~~~~~ 725 (850)
.++||.++++++++++++++
T Consensus 284 ---~~~Pw~~~~~~~~~~r~~~~ 303 (308)
T cd06593 284 ---YREPWEYGEEAVDVVRKFAK 303 (308)
T ss_pred ---CCCCcccChHHHHHHHHHHH
Confidence 45677777677777777664
No 15
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=5.1e-68 Score=587.57 Aligned_cols=307 Identities=24% Similarity=0.410 Sum_probs=263.7
Q ss_pred CCCCCCchhhccceeeeec--CCHHHHHHHHHHHHhCCCCceeEEeccccccccc----------ccCce--eeeeeeec
Q 040705 386 GRPPELPDWIVSGAVAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQDWVGQRET----------LIGSQ--LWWNWEVD 451 (850)
Q Consensus 386 Grp~lpP~Wa~~G~~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lDdw~~~~~~----------~~G~~--~~~~ft~d 451 (850)
|||+|||+||+ |+|+|++ .++++|+++++++++++||||++|||+|++.+.. ..|.+ .+.+++|+
T Consensus 1 G~p~lpP~wal-G~~~sr~~Y~~~~ev~~v~~~~~~~~iP~d~i~lD~W~~~~~~~~w~d~~y~~~~~~~~~~~~~~~f~ 79 (340)
T cd06597 1 GKPELLPKWAF-GLWMSANEWDTQAEVMRQMDAHEEHGIPVTVVVIEQWSDEATFYVFNDAQYTPKDGGAPLSYDDFSFP 79 (340)
T ss_pred CCCCCCchHHh-hhhhhccCCCCHHHHHHHHHHHHHcCCCeeEEEEecccCcceeeeeccchhcccccCCcceecccccC
Confidence 89999999998 9999875 4999999999999999999999999988764210 01211 13356677
Q ss_pred C-CCCcChHHHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEec-CCCCceEeccCCCH
Q 040705 452 T-TRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVP-NTAFDVGMLDLTHP 529 (850)
Q Consensus 452 ~-~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~-~w~g~~~~~DftnP 529 (850)
+ ++||||++||++||++|+|+++|++|+|...+.........|++++++||||++.+|++|.++ +|++.+++||||||
T Consensus 80 ~~~~FPdp~~mi~~Lh~~G~kv~l~v~P~i~~~~~~~~~~~~~~~~~~~~g~~vk~~~G~~~~~~~~W~g~~~~~Dftnp 159 (340)
T cd06597 80 VEGRWPNPKGMIDELHEQGVKVLLWQIPIIKLRPHPHGQADNDEDYAVAQNYLVQRGVGKPYRIPGQWFPDSLMLDFTNP 159 (340)
T ss_pred ccccCCCHHHHHHHHHHCCCEEEEEecCccccccccccccchhHHHHHHCCEEEEcCCCCccccccccCCCceeecCCCH
Confidence 4 799999999999999999999999999975322112334568899999999999999998764 79999999999999
Q ss_pred HHHHHHHHHHHHHH-hcCccEEEecCCCCC-CCcceecCCCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCc
Q 040705 530 DTASWFKQVLQEMV-EDGVRGWMADFGEGL-PVDAILYSGEDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEED 607 (850)
Q Consensus 530 ~a~~Ww~~~l~~l~-~~Gvdg~w~D~gE~~-p~d~~~~~G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~r 607 (850)
+|++||++++++++ +.||||||+||||+. +.|..+++|..+.++||+||++++++.++++++ .++|
T Consensus 160 ~a~~Ww~~~~~~~~~~~Gidg~w~D~~E~~~~~~~~~~~g~~~~~~hN~y~~~~~~~~~e~~~~------------~~~r 227 (340)
T cd06597 160 EAAQWWMEKRRYLVDELGIDGFKTDGGEHVWGRDLHFRDGRRGDEMRNTYPNHYVRAYNDFLRR------------AKKD 227 (340)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEecCCCccCCCCceecCCCcHHHhhcccHHHHHHHHHHHHHh------------ccCC
Confidence 99999999999988 589999999999986 346677788888899999999999999887654 3579
Q ss_pred eEEEEecccCCCCCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHH
Q 040705 608 LVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWM 687 (850)
Q Consensus 608 pfilsRSg~aGsqry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~ 687 (850)
+|+++||+|+|+|||++ +|+||+.|+|+ +|+.+|+++|++||||+||||+|||||.+. .+++|||+||+
T Consensus 228 ~filtRs~~~Gsqry~~-~WsGD~~s~W~---~L~~~i~~~L~~glsG~~~~g~DIgGF~g~-------~~~~EL~~RW~ 296 (340)
T cd06597 228 GVTFSRAGYTGAQAHGI-FWAGDENSTFG---AFRWSVFAGLSASASGIPYWGWDLAGFTGD-------VPTAELYVRST 296 (340)
T ss_pred cEEEEecccCccCCCcc-eecCCCCCCHH---HHHHHHHHHHHHhhcCCCcCCCccCCcCCC-------CCCHHHHHHHH
Confidence 99999999999999996 89999999997 599999999999999999999999999983 37999999999
Q ss_pred HHhcccccccccCCCCC-----CCCCCCCCchHH
Q 040705 688 ELNAFTTVFRTHEGNKP-----SFNSQFYSNQQT 716 (850)
Q Consensus 688 QlgaF~P~~R~H~~~~~-----~~~~~f~~~~~~ 716 (850)
|+|+|+|+||+|+.+.+ +.++||.+++++
T Consensus 297 Q~g~F~P~~R~H~~~~~~~~~~~~~epw~~~~~~ 330 (340)
T cd06597 297 AMAAFVPIMQYHSEFNGHSSPNEDRTPWNIAERT 330 (340)
T ss_pred HHhhcchhhhhccCCCCCCcCcCCccCCcccCcC
Confidence 99999999999998654 467788776543
No 16
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=1e-67 Score=581.41 Aligned_cols=305 Identities=23% Similarity=0.423 Sum_probs=262.8
Q ss_pred CCCCCCchhhccceeeeec--CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHH
Q 040705 386 GRPPELPDWIVSGAVAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLL 462 (850)
Q Consensus 386 Grp~lpP~Wa~~G~~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi 462 (850)
|+|+|||+||+ |+|+|++ .++++|+++++++++++||||++||| +|+..+ .|++|+||+++||||++||
T Consensus 1 G~~~m~P~wal-G~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~-------~~~~f~~d~~~FPdp~~mi 72 (319)
T cd06591 1 GKAPMMPKWAY-GFWQSKERYKTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQ-------GWGEWKFDPERFPDPKAMV 72 (319)
T ss_pred CCCCCCchHHH-HHHHhcccCCCHHHHHHHHHHHHHhCCCccEEEEechhhcCC-------CceeEEEChhhCCCHHHHH
Confidence 89999999998 9999874 58999999999999999999999999 787532 2569999999999999999
Q ss_pred HHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHH-
Q 040705 463 KDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQE- 541 (850)
Q Consensus 463 ~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~- 541 (850)
++||++|+|+++|++|+|.. +++.|+|++++||||++.+|+.+. .+|++.+++||||||+|++||++.+++
T Consensus 73 ~~L~~~G~kv~~~i~P~v~~-------~~~~y~e~~~~g~~v~~~~g~~~~-~~w~g~~~~~Dftnp~a~~w~~~~~~~~ 144 (319)
T cd06591 73 RELHEMNAELMISIWPTFGP-------ETENYKEMDEKGYLIKTDRGPRVT-MQFGGNTRFYDATNPEAREYYWKQLKKN 144 (319)
T ss_pred HHHHHCCCEEEEEecCCcCC-------CChhHHHHHHCCEEEEcCCCCeee-eeCCCCccccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999953 478899999999999999999886 788999999999999999999887754
Q ss_pred HHhcCccEEEecCCCCCCCcce------ecCCCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEEEEecc
Q 040705 542 MVEDGVRGWMADFGEGLPVDAI------LYSGEDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAG 615 (850)
Q Consensus 542 l~~~Gvdg~w~D~gE~~p~d~~------~~~G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg 615 (850)
+.+.||||||+||||+..++.. .+...++.++||.|++++++++++++++.. +++|||+++||+
T Consensus 145 ~~~~Gvdg~w~D~~Ep~~~~~~~~~~~~~~~~~~~~~~hN~y~~~~~~~~~e~~~~~~----------~~~r~f~~sRs~ 214 (319)
T cd06591 145 YYDKGVDAWWLDAAEPEYSVYDFGLDNYRYHLGPGLEVGNAYPLMHAKGIYEGQRAAG----------DEKRVVILTRSA 214 (319)
T ss_pred hhcCCCcEEEecCCCCCccCCcccccCcccCCCCchhhhhhhHHHHHHHHHHHHHHhC----------CCCCceEEEecc
Confidence 6689999999999998643211 111234568999999999999999887542 578999999999
Q ss_pred cCCCCCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCC-ccccCCChhHHHHHHHHhcccc
Q 040705 616 FRDSPKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLP-LIKYRRSEELLLRWMELNAFTT 694 (850)
Q Consensus 616 ~aGsqry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p-~~~~~~s~EL~iRW~QlgaF~P 694 (850)
|+|+|||++++|+||+.|+|+ +|+.+|+++|++||||+||+|+|||||.+...| .....+++|||+||+|+|+|+|
T Consensus 215 ~~Gsqry~~~~W~GD~~s~w~---~L~~~i~~~l~~glsG~~~~g~DiGGF~~~~~~~~~~~~~~~EL~~RW~q~gaf~P 291 (319)
T cd06591 215 WAGSQRYGALVWSGDIDSSWE---TLRRQIAAGLNMGLSGIPWWTTDIGGFFVGNPPAGLDDPEYRELYVRWFQFGAFCP 291 (319)
T ss_pred ccccccccCceeCCCccccHH---HHHHHHHHHHHHhhcCCccccCCcCCcCCCCccccccCCccHHHHHHHHHHhcCcc
Confidence 999999987689999999998 599999999999999999999999999985321 0011335899999999999999
Q ss_pred cccccCCCCCC-CCCCCCCchHHHHH
Q 040705 695 VFRTHEGNKPS-FNSQFYSNQQTLSH 719 (850)
Q Consensus 695 ~~R~H~~~~~~-~~~~f~~~~~~~~~ 719 (850)
+||+|+.+.++ .++||.+++++..+
T Consensus 292 ~~R~H~~~~~~~~~ePw~~g~e~~~~ 317 (319)
T cd06591 292 VMRSHGTREPREINEFWSYGEEVYDI 317 (319)
T ss_pred ccccCCCCCCCCCCcCcCCChHHHHh
Confidence 99999998765 35788887766543
No 17
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=2.8e-66 Score=569.56 Aligned_cols=294 Identities=21% Similarity=0.362 Sum_probs=254.6
Q ss_pred CCCCCCchhhccceeeeec--CC-----HHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcC
Q 040705 386 GRPPELPDWIVSGAVAGMQ--GG-----TDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKG 457 (850)
Q Consensus 386 Grp~lpP~Wa~~G~~lg~~--~s-----~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPd 457 (850)
|+|+|||+||| |+|+|.+ .+ +++|+++++++|+++||||+|||| +|+.... + .+++|+||+++|||
T Consensus 1 G~~~mpP~wal-G~~~sr~~Y~~~~~~~q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~---~--~~~~f~~d~~~FPd 74 (317)
T cd06599 1 GKPAMVPRWSL-GYSGSTMYYTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEG---G--KRYVFNWNKDRFPD 74 (317)
T ss_pred CCCCCCchHHH-HHHhcCCCCCCCCccHHHHHHHHHHHHHHcCCCeeEEEEeccccccCC---C--ceeeeecCcccCCC
Confidence 89999999998 9998864 34 899999999999999999999999 7875311 1 13479999999999
Q ss_pred hHHHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCC-eeEecCCCCceEeccCCCHHHHHHHH
Q 040705 458 WKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGE-QYLVPNTAFDVGMLDLTHPDTASWFK 536 (850)
Q Consensus 458 p~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~-~y~~~~w~g~~~~~DftnP~a~~Ww~ 536 (850)
|++||++||++|+|+++|++|+|.. .+++|+|++++||||++.+|+ ++++.+|++.+++||||||+|++||.
T Consensus 75 p~~mi~~L~~~g~k~~~~i~P~i~~-------~~~~y~e~~~~g~~v~~~~g~~~~~~~~w~g~~~~~Dftnp~a~~ww~ 147 (317)
T cd06599 75 PAAFVAKFHERGIRLAPNIKPGLLQ-------DHPRYKELKEAGAFIKPPDGREPSIGQFWGGVGSFVDFTNPEGREWWK 147 (317)
T ss_pred HHHHHHHHHHCCCEEEEEeCCcccC-------CCHHHHHHHHCCcEEEcCCCCCcceecccCCCeEeecCCChHHHHHHH
Confidence 9999999999999999999999963 357899999999999998876 56678899999999999999999999
Q ss_pred HHH-HHHHhcCccEEEecCCCCCC--Ccceec-CC--CCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEE
Q 040705 537 QVL-QEMVEDGVRGWMADFGEGLP--VDAILY-SG--EDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVF 610 (850)
Q Consensus 537 ~~l-~~l~~~Gvdg~w~D~gE~~p--~d~~~~-~G--~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfi 610 (850)
+.+ +.+.+.||||||+||||+.. .|..++ .| .+..++||+|++++++++++++++.. +++|||+
T Consensus 148 ~~~~~~~~~~Gvdg~w~D~~E~~~~~~~~~~~~~g~~~~~~~~~n~y~~l~~~a~~~~~~~~~----------~~~r~f~ 217 (317)
T cd06599 148 EGVKEALLDLGIDSTWNDNNEYEIWDDDAVCDGFGKPGTIGELRPVQPNLMARASHEAQAEHY----------PNRRPYI 217 (317)
T ss_pred HHHHHHHhcCCCcEEEecCCCCccCCCcceecCCCCccchhhcccchHHHHHHHHHHHHHHhC----------CCCCcEE
Confidence 988 55678999999999999853 343333 22 23346899999999999999987642 6789999
Q ss_pred EEecccCCCCCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHHh
Q 040705 611 FMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELN 690 (850)
Q Consensus 611 lsRSg~aGsqry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~Qlg 690 (850)
++||+|+|+|||+. +|+||+.++|+ +|+.+|+++|++||||+||||+|||||.+. .+++|||+||+|+|
T Consensus 218 ltRs~~~G~qry~~-~WsGD~~s~W~---~L~~~i~~~L~~glsG~~~~g~DIGGF~~~-------~~~~ELy~RW~Q~g 286 (317)
T cd06599 218 VSRSGFAGIQRYAQ-TWSGDNRTSWK---TLRYNIAMGLGMGLSGVANIGHDIGGFAGP-------APEPELFVRWVQNG 286 (317)
T ss_pred EEcCCcccccCCcC-eeCCCcccCHH---HHHHHHHHHHhhhccCCcccccccCccCCC-------CCCHHHHHHHHHHc
Confidence 99999999999975 89999999997 599999999999999999999999999873 47899999999999
Q ss_pred cccccccccCCCCC-CCCCCCCCc
Q 040705 691 AFTTVFRTHEGNKP-SFNSQFYSN 713 (850)
Q Consensus 691 aF~P~~R~H~~~~~-~~~~~f~~~ 713 (850)
+|+|+||+|+.... ..++||.++
T Consensus 287 ~F~P~~R~H~~~~~~~~~ePw~f~ 310 (317)
T cd06599 287 IFQPRFCIHSWNTDNTVTEPWMYP 310 (317)
T ss_pred cCCHhhhcccCCCCCCCcCCeecc
Confidence 99999999997643 345777774
No 18
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=7e-66 Score=566.95 Aligned_cols=287 Identities=17% Similarity=0.334 Sum_probs=240.4
Q ss_pred CCCCCCchhhccceeeeec--CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHH
Q 040705 386 GRPPELPDWIVSGAVAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLL 462 (850)
Q Consensus 386 Grp~lpP~Wa~~G~~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi 462 (850)
|+|+|||+||+ |||+|++ .++++|++|++++|+++||||++|+| |||..+ .+|+||+++||||++|+
T Consensus 1 G~p~mpP~Wal-G~~qsr~~Y~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~~~---------~~Ft~d~~~FPdp~~mv 70 (332)
T cd06601 1 GRSKLKPRYAL-GFHQGCYGYSNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNY---------RTFTTNGGGFPNPKEMF 70 (332)
T ss_pred CCCCCCchHHh-hhhhCCCCCCCHHHHHHHHHHHHHcCCCCceEEEcCchhcCC---------CceeecCCCCCCHHHHH
Confidence 89999999998 9999874 58999999999999999999999999 898543 27999999999999999
Q ss_pred HHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHH
Q 040705 463 KDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEM 542 (850)
Q Consensus 463 ~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l 542 (850)
++||++|+|+++|++|+|. .+..|++.+++||||||+|++||.+.++.+
T Consensus 71 ~~L~~~G~klv~~i~P~i~-------------------------------~g~~~~~~~~~pDftnp~ar~wW~~~~~~l 119 (332)
T cd06601 71 DNLHNKGLKCSTNITPVIS-------------------------------YGGGLGSPGLYPDLGRPDVREWWGNQYKYL 119 (332)
T ss_pred HHHHHCCCeEEEEecCcee-------------------------------cCccCCCCceeeCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999993 012355668899999999999999999999
Q ss_pred HhcCccEEEecCCCCCCC-----------cceecC--------CCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccC
Q 040705 543 VEDGVRGWMADFGEGLPV-----------DAILYS--------GEDPISAHNRYPELWAQINREFVEEWKDKCTGTKRED 603 (850)
Q Consensus 543 ~~~Gvdg~w~D~gE~~p~-----------d~~~~~--------G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~ 603 (850)
.+.||++||+|||||..+ |+...+ +..+.++||+|++++++++++++++.. ..
T Consensus 120 ~~~Gv~~~W~DmnEp~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~hN~Y~~~~~~a~~e~~~~~~--------~~ 191 (332)
T cd06601 120 FDIGLEFVWQDMTTPAIMPSYGDMKGFPPRLLVTDDSYENNVKRKPAIELWNLYSYNLHKATWHGLNNLN--------AR 191 (332)
T ss_pred HhCCCceeecCCCCcccccCCCccCCCCCcccccCCccccccCCchHHHHhhhhHHHHHHHHHHHHHHhh--------cC
Confidence 999999999999998643 222221 123578999999999999999987642 12
Q ss_pred CCCceEEEEecccCCCCCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCC--ccccCCChh
Q 040705 604 TEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLP--LIKYRRSEE 681 (850)
Q Consensus 604 ~~~rpfilsRSg~aGsqry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p--~~~~~~s~E 681 (850)
+++|||+||||+|+|+|||++ +|+||+.|+|+. |+.+|+++|++||||+||||+|||||.+.+.+ ..++.+++|
T Consensus 192 ~~~RpfiltRS~~aGsqrY~~-~WsGDn~stW~~---L~~si~~~L~~~lsGip~~g~DIGGF~g~~~~~~~~~~~~~~E 267 (332)
T cd06601 192 KNKRNFIIGRGSYAGMQRFAG-LWTGDNSSSWDF---LQINIAQVLNLGMSGLPIAGSDIGGFTSYDGENSIQRTWCNPE 267 (332)
T ss_pred CCCCcEEEEecCcCccCCcCc-eeCCCcccCHHH---HHHHHHHHHHhhhcCCCccCCccCCcCCCCcccccccCCCCHH
Confidence 678999999999999999997 899999999985 99999999999999999999999999985321 112347899
Q ss_pred HHHHHHHHhcccccccccCCCC--CCCCCC----------------CCCchHHHHHHHHHHH
Q 040705 682 LLLRWMELNAFTTVFRTHEGNK--PSFNSQ----------------FYSNQQTLSHFARFAK 725 (850)
Q Consensus 682 L~iRW~QlgaF~P~~R~H~~~~--~~~~~~----------------f~~~~~~~~~~~~~~~ 725 (850)
||+||+|+|+|+|+||+|+... ...++| |+..+++..++|++++
T Consensus 268 L~~RW~Q~GaF~P~~R~H~~~~~~~~~~ep~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~ 329 (332)
T cd06601 268 LLIRWYQAGFLLPWFRNHYDRKIRQKFQEPAKYFQEPYAHLIDYEQLYLYENVPEICRKYVE 329 (332)
T ss_pred HHHHHHHHhcCCceeccCCCCccCcccCCcccccccccccccccccccccHHHHHHHHHHHH
Confidence 9999999999999999998743 233444 3444566666666553
No 19
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.3e-62 Score=534.72 Aligned_cols=283 Identities=18% Similarity=0.315 Sum_probs=229.3
Q ss_pred hCCCCCCchhhccceeeeec--CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHH
Q 040705 385 IGRPPELPDWIVSGAVAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQL 461 (850)
Q Consensus 385 tGrp~lpP~Wa~~G~~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~m 461 (850)
||+|+|||+||+ |+|+|++ .++++|+++++++|+++||||++|+| ||+....++.+...|++|+||+++||||++|
T Consensus 1 TG~~~~~P~wal-G~~qsr~~y~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPdp~~m 79 (292)
T cd06595 1 AGKIPLLPRYAF-GNWWSRYWPYSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPDPEKL 79 (292)
T ss_pred CCCCCCCchHHH-HhHhhCCcCCCHHHHHHHHHHHHHhCCCccEEEEecccccccccccccCCcceeEEChhcCCCHHHH
Confidence 899999999998 9999973 59999999999999999999999999 8987654333323467999999999999999
Q ss_pred HHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHH-H
Q 040705 462 LKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVL-Q 540 (850)
Q Consensus 462 i~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l-~ 540 (850)
+++||++|+|+++|++|++... ..++.|++..+. ..++..+ +...++|||||++++||.+.+ +
T Consensus 80 i~~Lh~~G~k~v~~v~P~~~~~-----~~~~~y~~~~~~-~~~~~~~----------~~~~~~D~tnp~a~~~w~~~~~~ 143 (292)
T cd06595 80 LQDLHDRGLKVTLNLHPADGIR-----AHEDQYPEMAKA-LGVDPAT----------EGPILFDLTNPKFMDAYFDNVHR 143 (292)
T ss_pred HHHHHHCCCEEEEEeCCCcccC-----CCcHHHHHHHHh-cCCCccc----------CCeEEecCCCHHHHHHHHHHHHH
Confidence 9999999999999999998532 235678764332 2222111 123578999999999887755 5
Q ss_pred HHHhcCccEEEecCCCCCCCcceecCCCCcCcccCchhHHH-HHHHHHHHHHHhhcccCccccCCCCceEEEEecccCCC
Q 040705 541 EMVEDGVRGWMADFGEGLPVDAILYSGEDPISAHNRYPELW-AQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDS 619 (850)
Q Consensus 541 ~l~~~Gvdg~w~D~gE~~p~d~~~~~G~~~~~~HN~Y~~l~-aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~aGs 619 (850)
.+.+.||||||+||||+.++. .+|.++..+ +...++... .+++|||+||||+|+|+
T Consensus 144 ~~~~~Gidg~W~D~~E~~~~~-----------~~~~~~~~~~~~~~y~~~~------------~~~~r~f~lsRs~~~G~ 200 (292)
T cd06595 144 PLEKQGVDFWWLDWQQGNRTR-----------TPGLDPLWWLNHVHYLDSA------------RNGRRPLIFSRWAGLGS 200 (292)
T ss_pred HHHhcCCcEEEecCCCCcccc-----------cCCcchHHHHHHHHHHHhh------------ccCCCcEEEEeecccCC
Confidence 677899999999999997652 244444443 233343321 15789999999999999
Q ss_pred CCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHHhccccccccc
Q 040705 620 PKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTH 699 (850)
Q Consensus 620 qry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~QlgaF~P~~R~H 699 (850)
|||+. +|+||+.|+|++ |+.+|+++|++|+||+||||+|||||.+. .+++|||+||+|+|+|+|+||+|
T Consensus 201 qry~~-~WsGD~~s~W~~---l~~~i~~~l~~~~sG~p~~g~DiGGF~~~-------~~~~ELy~RW~Q~gaf~P~~R~H 269 (292)
T cd06595 201 HRYPI-GFSGDTIISWAS---LAFQPYFTATASNIGYGYWSHDIGGHMLG-------VTDPELYTRWIQFGVFSPILRLH 269 (292)
T ss_pred CcCCC-ccCCCcccCHHH---HHHHHHHHHHHHhcCCCcCCCccCCCCCC-------CCCHHHHHHHHHHhhcccccccC
Confidence 99996 899999999985 99999999999999999999999999983 47999999999999999999999
Q ss_pred CCCCC-CCCCCCCCchHHHH
Q 040705 700 EGNKP-SFNSQFYSNQQTLS 718 (850)
Q Consensus 700 ~~~~~-~~~~~f~~~~~~~~ 718 (850)
+.+.+ ..++||.+++++.+
T Consensus 270 ~~~~~~~~~ePW~~g~~~~~ 289 (292)
T cd06595 270 STKNPFNEKEPWLYEEEASK 289 (292)
T ss_pred CCCCCCCCccCcccCcHHHH
Confidence 98865 35678877665543
No 20
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=100.00 E-value=1.4e-58 Score=496.66 Aligned_cols=255 Identities=27% Similarity=0.559 Sum_probs=228.2
Q ss_pred CCCCCCchhhccceeeeec--CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHH
Q 040705 386 GRPPELPDWIVSGAVAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLL 462 (850)
Q Consensus 386 Grp~lpP~Wa~~G~~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi 462 (850)
|+|+|||+|++ |+|+|++ .++++|+++++++++++||||++||| +|+.... .+.|+||+++||||++|+
T Consensus 1 G~p~~~P~wa~-G~~~~~~~~~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~~~-------~f~~~~d~~~Fpdp~~~i 72 (265)
T cd06589 1 GKPALPPKWAF-GYWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYG-------DFTFDWDAGKFPNPKSMI 72 (265)
T ss_pred CCCCCCcHHHH-HHHHhcCCCCCHHHHHHHHHHHHHcCCCccEEEECcccccCCc-------eeeeecChhhCCCHHHHH
Confidence 89999999998 9999976 68999999999999999999999999 6764321 123499999999999999
Q ss_pred HHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHH
Q 040705 463 KDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEM 542 (850)
Q Consensus 463 ~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l 542 (850)
++||++|+|+++|++|+| ++||++.++++
T Consensus 73 ~~l~~~g~~~~~~~~P~v---------------------------------------------------~~w~~~~~~~~ 101 (265)
T cd06589 73 DELHDNGVKLVLWIDPYI---------------------------------------------------REWWAEVVKKL 101 (265)
T ss_pred HHHHHCCCEEEEEeChhH---------------------------------------------------HHHHHHHHHHh
Confidence 999999999999999986 89999999886
Q ss_pred -HhcCccEEEecCCCCCCCcceecCC-----CCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEEEEeccc
Q 040705 543 -VEDGVRGWMADFGEGLPVDAILYSG-----EDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGF 616 (850)
Q Consensus 543 -~~~Gvdg~w~D~gE~~p~d~~~~~G-----~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~ 616 (850)
.+.||||||+||||+.+++.....+ ..+.++||+|+.++++++++++++.. +++|||+++||++
T Consensus 102 ~~~~Gvdg~w~D~~E~~~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~~~~~~~~----------~~~r~~~~sRs~~ 171 (265)
T cd06589 102 LVSLGVDGFWTDMGEPSPGDGNIFTGGVVGRVKHEEMHNAYPLLYAEATYEALRKNS----------KNKRPFILSRSGY 171 (265)
T ss_pred hccCCCCEEeccCCCCCcCCCccccCCcCCCccHHHHcchhHHHHHHHHHHHHHHhc----------CCCCeEEEEcCCc
Confidence 7899999999999999886544433 46788999999999999999987642 5889999999999
Q ss_pred CCCCCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHHHHHHHHhcccccc
Q 040705 617 RDSPKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVF 696 (850)
Q Consensus 617 aGsqry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~iRW~QlgaF~P~~ 696 (850)
+|+|||+. +|+||+.++|+. |+.+|+++|++||||+||+|+|||||.+. .+++|||+||+|+|+|+|+|
T Consensus 172 ~Gsqry~~-~W~GD~~stW~~---l~~~i~~~l~~~l~G~~~~g~DigGf~~~-------~~~~EL~~RW~Q~g~F~P~~ 240 (265)
T cd06589 172 AGSQRYAG-MWSGDNTSTWGY---LRSQIPAGLTMSMSGIPFVGSDIGGFTGG-------DPSAELYVRWFQFGAFTPIM 240 (265)
T ss_pred ccccCcCc-eeCCcccCCHHH---HHHHHHHHHhhhccCCcccCCCcCCCCCC-------CCCHHHHHHHHHHhcCCcce
Confidence 99999975 899999999984 99999999999999999999999999984 57999999999999999999
Q ss_pred cccCCCCCCCCCCCCCchHHHHHH
Q 040705 697 RTHEGNKPSFNSQFYSNQQTLSHF 720 (850)
Q Consensus 697 R~H~~~~~~~~~~f~~~~~~~~~~ 720 (850)
|+|+.+.+..++||.+++++++++
T Consensus 241 R~H~~~~~~~~epw~~~~~~~~~~ 264 (265)
T cd06589 241 RFHSWNSPKDTEPWAFDEEVTAII 264 (265)
T ss_pred ecCCCCCCCCcCCCCcCHHHHHhh
Confidence 999998888888999887776543
No 21
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.6e-57 Score=497.23 Aligned_cols=284 Identities=24% Similarity=0.370 Sum_probs=241.4
Q ss_pred CCCchhhccceeeeecCCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHHHHHHh
Q 040705 389 PELPDWIVSGAVAGMQGGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNA 467 (850)
Q Consensus 389 ~lpP~Wa~~G~~lg~~~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~ 467 (850)
...|.|.+ ........++++|+++++++++++||||+++|| +|+... ++|+||+++||||++|+++||+
T Consensus 12 ~~~p~W~~-W~~~~~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~---------g~f~~d~~~FPdp~~mi~~l~~ 81 (303)
T cd06592 12 FRSPIWST-WARYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETCY---------GDFDFDPTKFPDPKGMIDQLHD 81 (303)
T ss_pred hCCCccCC-hhhhccCcCHHHHHHHHHHHHHcCCCCCeEEeCCCccccC---------CccccChhhCCCHHHHHHHHHH
Confidence 46899985 212223468999999999999999999999999 687431 3899999999999999999999
Q ss_pred cCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCC-CeeEecCCCCceEeccCCCHHHHHHHHHHHHHHH-hc
Q 040705 468 HHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNG-EQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMV-ED 545 (850)
Q Consensus 468 ~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G-~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~-~~ 545 (850)
+|+|+++|++|+|.. ++++|+|++++|+||++++| .++.+.+|++.+++||||||+|++||++.+++++ +.
T Consensus 82 ~G~k~~l~i~P~i~~-------~s~~~~e~~~~g~~vk~~~g~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~ 154 (303)
T cd06592 82 LGFRVTLWVHPFINT-------DSENFREAVEKGYLVSEPSGDIPALTRWWNGTAAVLDFTNPEAVDWFLSRLKSLQEKY 154 (303)
T ss_pred CCCeEEEEECCeeCC-------CCHHHHhhhhCCeEEECCCCCCCcccceecCCcceEeCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999963 46889999999999999998 6777888999999999999999999999999988 89
Q ss_pred CccEEEecCCCC--CCCcceecCCCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEEEEecccCCCCCcc
Q 040705 546 GVRGWMADFGEG--LPVDAILYSGEDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRDSPKWG 623 (850)
Q Consensus 546 Gvdg~w~D~gE~--~p~d~~~~~G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~aGsqry~ 623 (850)
||||||+||||+ +|.+..++ .+..+||.|+.++++++++ .++|+++||+|+|+|+++
T Consensus 155 Gvdg~w~D~~E~~~~p~~~~~~---~~~~~~n~y~~~~~~~~~~------------------~~~~~~~Rsg~~g~~~~~ 213 (303)
T cd06592 155 GIDSFKFDAGEASYLPQDYVTE---DPLLNPDEYTRLYAEMVAE------------------FGDLIEVRAGWRSQGLPL 213 (303)
T ss_pred CCcEEEeCCCCcccCCcccccC---CcccCHHHHHHHHHHHHHh------------------hccceEEEeeeecCCCCe
Confidence 999999999998 45565544 3467899999999877532 138999999999887777
Q ss_pred cccccCCcccCCCcchhHHHHHHHHHHccccCCCccccC-cCCCCCCCCCccccCCChhHHHHHHHHhcccccccccCCC
Q 040705 624 MLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSD-IGGYCAVNLPLIKYRRSEELLLRWMELNAFTTVFRTHEGN 702 (850)
Q Consensus 624 ~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~D-IGGF~g~~~p~~~~~~s~EL~iRW~QlgaF~P~~R~H~~~ 702 (850)
. +|+||+.|+|+..+||+.+|+++|++||||+||||+| ||||.+.+.+ ....+++|||+||+|+|+|+|+||+|.
T Consensus 214 ~-~w~GD~~s~W~~~~gl~~~i~~~L~~~lsG~~~w~~D~iGGf~~~~~~-~~~~~~~EL~~RW~q~g~f~P~~R~h~-- 289 (303)
T cd06592 214 F-VRMMDKDSSWGGDNGLKSLIPTALTMGLLGYPFVLPDMIGGNAYGGNS-DDELPDKELYIRWLQLSAFLPVMQFSI-- 289 (303)
T ss_pred e-EEcCCCCCCCCCCcCHHHHHHHHHHhhccCCcccCCCccCCccccccc-cCCCCCHHHHHHHHHHHHhChhhhccc--
Confidence 5 8999999999987888999999999999999999999 8999864221 112579999999999999999999993
Q ss_pred CCCCCCCCCCchHHHHH
Q 040705 703 KPSFNSQFYSNQQTLSH 719 (850)
Q Consensus 703 ~~~~~~~f~~~~~~~~~ 719 (850)
+||.++++++++
T Consensus 290 -----~PW~~~~e~~~~ 301 (303)
T cd06592 290 -----APWQYDDEVVEI 301 (303)
T ss_pred -----CCccCCHHHHHh
Confidence 567776666543
No 22
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=2.9e-38 Score=329.84 Aligned_cols=238 Identities=24% Similarity=0.322 Sum_probs=188.5
Q ss_pred CCCCCCchhhcc-ceeeeec---------------------CCHHHHHHHHHHHHhCCCCceeEEecccccccccccCce
Q 040705 386 GRPPELPDWIVS-GAVAGMQ---------------------GGTDAVRRVWDALRSYQVPVSAFWLQDWVGQRETLIGSQ 443 (850)
Q Consensus 386 Grp~lpP~Wa~~-G~~lg~~---------------------~s~~~V~~v~~~~r~~~IP~D~i~lDdw~~~~~~~~G~~ 443 (850)
|+|.|||+|++. |..-||. ..+..+++|+++++++++|+.-|.-+|-++
T Consensus 1 g~p~~~p~~a~~~g~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~y~~~~~plgw~lpndgyg--------- 71 (261)
T cd06596 1 GRPFLLPEYALYLGDADCYNRDYWRKVPEGTSDGGLNGEKESTTDDARKVADKYKENDMPLGWMLPNDGYG--------- 71 (261)
T ss_pred CCCccchHHHHhccchhhhccCccccCCCccccccCCCCcccchhhHHHHHHHHHhcCCCceeeccCCCCc---------
Confidence 899999999973 2222331 123688999999999999999876655321
Q ss_pred eeeeeeecCCCCcChHHHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEe
Q 040705 444 LWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGM 523 (850)
Q Consensus 444 ~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~ 523 (850)
.-|.+.+++++.++++|++..+|..-.+
T Consensus 72 ---------~~y~~l~~~~~~~~~~g~~~glwt~~~l------------------------------------------- 99 (261)
T cd06596 72 ---------CGYENLKEVVDYLHANGVETGLWTQSGL------------------------------------------- 99 (261)
T ss_pred ---------chHHHHHHHHHHHHHcCCccccccccch-------------------------------------------
Confidence 1236789999999999999999943211
Q ss_pred ccCCCHHHHHHHHHHHHHHHhcCccEEEecCCCCCCCcceecCCCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccC
Q 040705 524 LDLTHPDTASWFKQVLQEMVEDGVRGWMADFGEGLPVDAILYSGEDPISAHNRYPELWAQINREFVEEWKDKCTGTKRED 603 (850)
Q Consensus 524 ~DftnP~a~~Ww~~~l~~l~~~Gvdg~w~D~gE~~p~d~~~~~G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~ 603 (850)
.++.++....|+...++|-.-. -.+=.|++.+++++++++++.
T Consensus 100 ------------~~~~~ev~~~g~~~~k~Dv~w~--------------g~gy~~~l~~~ka~yeg~~~~----------- 142 (261)
T cd06596 100 ------------RDIAKEVGAAGVRARKTDVAWV--------------GAGYSFALNGVKAAADGIESN----------- 142 (261)
T ss_pred ------------hhhhhhhccCCceEEeccchhh--------------ccchhHHHHHHHHHHHHHHhC-----------
Confidence 0112233345888888774211 112347889999999988652
Q ss_pred CCCceEEEEecccCCCCCcccccccCCcccCCCcchhHHHHHHHHHHccccCCCccccCcCCCCCCCCCccccCCChhHH
Q 040705 604 TEEDLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVGLLSSGLSGYAFNHSDIGGYCAVNLPLIKYRRSEELL 683 (850)
Q Consensus 604 ~~~rpfilsRSg~aGsqry~~~~WtGD~~ssW~~~dgL~~sI~~~Ls~glsG~pf~g~DIGGF~g~~~p~~~~~~s~EL~ 683 (850)
+++|||+++||+|+|+|||++ +|+||+.++|+. |+.+|+++|++||||+||||+|||||.+ . ++|||
T Consensus 143 ~~~RpfiltRsg~aGsQRy~~-~WsGD~~stWe~---Lr~sI~~~L~~gLsG~p~~G~DIGGF~g--------~-~~EL~ 209 (261)
T cd06596 143 SNARPFIVTVDGWAGTQRYAG-IWTGDQSGSWEY---IRFHIPTYIGSGLSGQPNTTSDVDGIFG--------G-SPETY 209 (261)
T ss_pred CCCCCEEEEecCccccCCCCC-ccCCCCcCcHHH---HHHHHHHHHHHHhcCCCcCccccCcCCC--------C-CHHHH
Confidence 678999999999999999997 899999999984 9999999999999999999999999998 4 89999
Q ss_pred HHHHHHhcccccccccCCCCCCCCCCCCCchHHHHHHHHHHH-HHHHHHHHHH
Q 040705 684 LRWMELNAFTTVFRTHEGNKPSFNSQFYSNQQTLSHFARFAK-VYRAWKFYRI 735 (850)
Q Consensus 684 iRW~QlgaF~P~~R~H~~~~~~~~~~f~~~~~~~~~~~~~~~-ry~lL~pY~Y 735 (850)
+||+|+|+|+|+||+|+......++||.+++++..+++++++ ||++| ||+|
T Consensus 210 vRW~Q~gaF~P~~R~h~~~~~~~rEPW~fge~~~~i~R~~l~LRY~Ll-PYiY 261 (261)
T cd06596 210 TRDLQWKAFTPVLMTMSGWAANDKQPWVFGEPYTSINRDYLKLKMRLM-PYIY 261 (261)
T ss_pred HHHHHHHHhhhhhhhccCCCCCCCCCeeCCHHHHHHHHHHHHHHHHhh-CccC
Confidence 999999999999999988766677899888888888888876 56666 7986
No 23
>PF13802 Gal_mutarotas_2: Galactose mutarotase-like; PDB: 1XSI_F 1XSK_D 1WE5_E 2F2H_F 1XSJ_F 2G3N_C 2G3M_F 3POC_A 3MKK_A 3PHA_A ....
Probab=99.40 E-value=2.3e-13 Score=116.58 Aligned_cols=65 Identities=29% Similarity=0.660 Sum_probs=46.1
Q ss_pred CCCeEecCCCCCCCCCCCCEEEeEeeccCCCCCCCccccccccccccCCCCCcCCCCceeEEE---EEcceEEEEecccc
Q 040705 268 NERFYGFGEQFSHMDFKGKRVPIFVQEQGIGRGDQPITFAANLVSYRAGGDWSTTYAPSPFYM---TSKMRSVYLQGYDY 344 (850)
Q Consensus 268 ~E~iYGlGE~~~~~~~~g~~~~~~~~e~g~g~~d~p~~~~~n~~~y~~gg~~~~~Y~~~Pf~~---ss~~~Gif~d~~~~ 344 (850)
+|++||||||++.++++|+++.+|+.|. .+|.. ...+++|++|||+| ++++||||++|+++
T Consensus 1 de~~yGlGE~~~~l~~~g~~~~~~n~D~---------------~~~~~-~~~~~lY~siPf~~~~~s~~~yGvf~dn~~~ 64 (68)
T PF13802_consen 1 DERFYGLGERFGPLNRRGKRYRLWNTDA---------------FGYNG-PSSDPLYKSIPFFIAHRSGKGYGVFFDNPSR 64 (68)
T ss_dssp T-EEEEESS-SS-SS-TTEEEEE-B------------------TSS-G-TTBS-BSEEEEEEEEEECTCEEEEEEE-SS-
T ss_pred CCcEEcccccCCCcccCCcEEEEEECcC---------------CCcCC-CcCccccccEeEEEEeCCCCEEEEEEeCCCc
Confidence 6899999999999999999999997643 22222 23688999999999 88899999999999
Q ss_pred eeee
Q 040705 345 SVFD 348 (850)
Q Consensus 345 ~~fd 348 (850)
+.||
T Consensus 65 ~~~D 68 (68)
T PF13802_consen 65 TFFD 68 (68)
T ss_dssp EEEE
T ss_pred eEEC
Confidence 9987
No 24
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=99.23 E-value=1.1e-10 Score=132.09 Aligned_cols=138 Identities=20% Similarity=0.330 Sum_probs=98.3
Q ss_pred CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcC-hHHHHHHHHhcCceEEEecCCccCC
Q 040705 405 GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKG-WKQLLKDLNAHHVKVMTYCNPCLAP 482 (850)
Q Consensus 405 ~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPd-p~~mi~~Lh~~G~k~~~~i~P~I~~ 482 (850)
-+++.+++.++.+++.| ++.|.|| .|++.+.... ...++|+.|+++||+ .+.+++.+|++|+|+.+|+.|.+.
T Consensus 55 ~~e~~i~~~a~~~~~~G--~e~fviDDGW~~~r~~d~--~~~GdW~~~~~kFP~Gl~~l~~~i~~~Gmk~GlW~ePe~v- 129 (394)
T PF02065_consen 55 ITEEKILELADAAAELG--YEYFVIDDGWFGGRDDDN--AGLGDWEPDPKKFPNGLKPLADYIHSLGMKFGLWFEPEMV- 129 (394)
T ss_dssp --HHHHHHHHHHHHHHT---SEEEE-SSSBCTESTTT--STTSBECBBTTTSTTHHHHHHHHHHHTT-EEEEEEETTEE-
T ss_pred CCHHHHHHHHHHHHHhC--CEEEEEcCccccccCCCc--ccCCceeEChhhhCCcHHHHHHHHHHCCCeEEEEeccccc-
Confidence 37899999999998876 5789999 5886543211 112389999999998 999999999999999999999875
Q ss_pred CCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHH-hcCccEEEecCCCCC
Q 040705 483 SHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMV-EDGVRGWMADFGEGL 558 (850)
Q Consensus 483 ~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~-~~Gvdg~w~D~gE~~ 558 (850)
+.++++|++- .+++++.++.....+ ....++|++||++++|..+.+.+++ +.|||.+|.|||..+
T Consensus 130 -----~~~S~l~~~h--Pdw~l~~~~~~~~~~----r~~~vLD~~~pev~~~l~~~i~~ll~~~gidYiK~D~n~~~ 195 (394)
T PF02065_consen 130 -----SPDSDLYREH--PDWVLRDPGRPPTLG----RNQYVLDLSNPEVRDYLFEVIDRLLREWGIDYIKWDFNRDI 195 (394)
T ss_dssp -----ESSSCHCCSS--BGGBTCCTTSE-ECB----TTBEEB-TTSHHHHHHHHHHHHHHHHHTT-SEEEEE-TS-T
T ss_pred -----cchhHHHHhC--ccceeecCCCCCcCc----ccceEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEeccccCC
Confidence 3456777643 246666544333222 1346899999999999999888765 689999999999764
No 25
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]
Probab=98.57 E-value=1.7e-06 Score=98.45 Aligned_cols=175 Identities=16% Similarity=0.214 Sum_probs=126.8
Q ss_pred EEEeCCCHHHHHHHHHHHhCCCCCCchhhc----cce--eeeec--CCHHHHHHHHHHHHhCCCCceeEEecc-cccccc
Q 040705 367 RILHGNSPCELIEHFTETIGRPPELPDWIV----SGA--VAGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQD-WVGQRE 437 (850)
Q Consensus 367 y~~~G~tp~dvi~~Yt~LtGrp~lpP~Wa~----~G~--~lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lDd-w~~~~~ 437 (850)
.+..++....+.+.|++++++-.+|-.|+- -|+ |.+++ -+.+++.+.++..++.+ ++.|.||| |.+.+.
T Consensus 260 v~~edqgl~~lsq~y~~~v~~~i~~~~~~~kprPi~~nsWea~Yfd~t~e~ile~vk~akk~g--vE~FvlDDGwfg~rn 337 (687)
T COG3345 260 VVLEDQGLNGLSQKYAELVRMEIVPRPRVKKPRPIGWNSWEAYYFDFTEEEILENVKEAKKFG--VELFVLDDGWFGGRN 337 (687)
T ss_pred EEEcCCCcchHHHHHHHHHHhhcCcccccCCCCcceeeceeeeeecCCHHHHHHHHHHHhhcC--eEEEEEccccccccC
Confidence 344577889999999999998877722221 021 23333 37889999998887765 89999995 886654
Q ss_pred cccCceeeeeeeecCCCCcC-hHHHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecC
Q 040705 438 TLIGSQLWWNWEVDTTRYKG-WKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPN 516 (850)
Q Consensus 438 ~~~G~~~~~~ft~d~~~FPd-p~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~ 516 (850)
+ ..+..+||-.|.++||. .++|++.++++|+++.+|+-|.+. +.++++|++- -+++|| .+|.+....-
T Consensus 338 d--d~~slGDWlv~seKfPsgiE~li~~I~e~Gl~fGIWlePemv------s~dSdlfrqH--PDWvvk-~~G~p~~~~R 406 (687)
T COG3345 338 D--DLKSLGDWLVNSEKFPSGIEELIEAIAENGLIFGIWLEPEMV------SEDSDLFRQH--PDWVVK-VNGYPLMAGR 406 (687)
T ss_pred c--chhhhhceecchhhccccHHHHHHHHHHcCCccceeecchhc------ccchHHHhhC--CCeEEe-cCCccccccc
Confidence 2 12334589999999997 899999999999999999999985 5678999864 678888 6787643211
Q ss_pred CCCceEeccCCCHHHHHHHHHHHH-HHHhcCccEEEecCCCC
Q 040705 517 TAFDVGMLDLTHPDTASWFKQVLQ-EMVEDGVRGWMADFGEG 557 (850)
Q Consensus 517 w~g~~~~~DftnP~a~~Ww~~~l~-~l~~~Gvdg~w~D~gE~ 557 (850)
....+|+.||...+.-.+.+. .+...-|+.++-|||-.
T Consensus 407 ---nqyvl~~s~p~vv~~l~~~l~qll~~~~v~ylkwdmnr~ 445 (687)
T COG3345 407 ---NQYVLWLSNPIVVLDLSEDLVQLLLFHLVSYLKWDMNRE 445 (687)
T ss_pred ---cchhhhccChHHHHHhhhHHHHHHHhhhHHHHHHHhCcc
Confidence 235678888888887777443 34455677777777654
No 26
>PLN03231 putative alpha-galactosidase; Provisional
Probab=97.95 E-value=0.00024 Score=79.50 Aligned_cols=135 Identities=10% Similarity=0.057 Sum_probs=88.1
Q ss_pred CCHHHHHHHHHHHHhCCC---CceeEEec-ccccccc----------------cccCceeeeeeeecCCCCcC------h
Q 040705 405 GGTDAVRRVWDALRSYQV---PVSAFWLQ-DWVGQRE----------------TLIGSQLWWNWEVDTTRYKG------W 458 (850)
Q Consensus 405 ~s~~~V~~v~~~~r~~~I---P~D~i~lD-dw~~~~~----------------~~~G~~~~~~ft~d~~~FPd------p 458 (850)
-++++|++.++ +.+.|+ -.+-|.|| .|+.... +..| .+.-|+++||+ .
T Consensus 15 i~E~~i~~~Ad-~v~~gL~~~GY~Yv~iDd~W~~~~~~g~~~~~~~~~~~~~~d~~G-----~l~pd~~rFPs~~~~~G~ 88 (357)
T PLN03231 15 ISEEQFLENAK-IVSETLKPHGYEYVVIDYLWYRKLKHGWFKTSAKSPGYDLIDKWG-----RPLPDPKRWPSTTGGKGF 88 (357)
T ss_pred cCHHHHHHHHH-HHHcchHHhCCEEEEECCcccccccccccccccccccccccCCCC-----CcccCcccCCCCccccCc
Confidence 47888888887 444442 34557788 4875321 1223 56789999996 9
Q ss_pred HHHHHHHHhcCceEEEecCCccCCCCCCCCccchh--------hH-HHHhCCcEEecCCCCeeEecCC-CCceEeccCCC
Q 040705 459 KQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNL--------FE-EAKKLDILVKDKNGEQYLVPNT-AFDVGMLDLTH 528 (850)
Q Consensus 459 ~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~--------y~-e~~~~g~fvk~~~G~~y~~~~w-~g~~~~~Dftn 528 (850)
+.+.+.+|++|+|+.++.+|.+.+...+ ..++. ++ ++ +++-+.+. --.| +..-.-+|..+
T Consensus 89 k~lADyvHs~GLKfGIY~~~G~~tca~~--~~~pi~G~~Gs~g~~~~a--~Dia~~~~------~c~~~~~~~~~v~~~~ 158 (357)
T PLN03231 89 APIAAKVHALGLKLGIHVMRGISTTAVK--KKTPILGAFKSNGHAWNA--KDIALMDQ------ACPWMQQCFVGVNTSS 158 (357)
T ss_pred HHHHHHHHhCCcceEEEecCCccchhcc--cCCccCCCCcccccccch--hhhccccc------cccccccccccccccc
Confidence 9999999999999999999998542110 01111 10 01 11111000 0011 11123689999
Q ss_pred HHHHHHHHHHHHHHHhcCccEEEecCC
Q 040705 529 PDTASWFKQVLQEMVEDGVRGWMADFG 555 (850)
Q Consensus 529 P~a~~Ww~~~l~~l~~~Gvdg~w~D~g 555 (850)
|.|++|+....+.+-+.|||.+|.|.+
T Consensus 159 ~gaq~y~~~~a~~fA~WGVDylK~D~c 185 (357)
T PLN03231 159 EGGKLFIQSLYDQYASWGIDFIKHDCV 185 (357)
T ss_pred hhHHHHHHHHHHHHHHhCCCEEeeccc
Confidence 999999999999999999999999954
No 27
>PLN02229 alpha-galactosidase
Probab=97.93 E-value=0.00012 Score=83.51 Aligned_cols=90 Identities=16% Similarity=0.180 Sum_probs=66.2
Q ss_pred hCCCCCCch-hhccce-eeeecCCHHHHHHHHHHHHhCCCC---ceeEEecc-cccccccccCceeeeeeeecCCCCcC-
Q 040705 385 IGRPPELPD-WIVSGA-VAGMQGGTDAVRRVWDALRSYQVP---VSAFWLQD-WVGQRETLIGSQLWWNWEVDTTRYKG- 457 (850)
Q Consensus 385 tGrp~lpP~-Wa~~G~-~lg~~~s~~~V~~v~~~~r~~~IP---~D~i~lDd-w~~~~~~~~G~~~~~~ft~d~~~FPd- 457 (850)
.|-...||. |.. | .++..-+++.+++.++.+.+.|+. .+-+.||| |+....+..| ++..|+++||+
T Consensus 57 ngla~tPpmGWnS--Wn~~~~~i~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~~G-----~l~~d~~rFP~G 129 (427)
T PLN02229 57 NGLARTPQMGWNS--WNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSKG-----QLVPDPKTFPSG 129 (427)
T ss_pred CCccCCCCceEEc--hhhhCcccCHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCCCC-----CEEEChhhcCCc
Confidence 455566774 321 0 012234889999999987665544 77788995 8755434444 68889999996
Q ss_pred hHHHHHHHHhcCceEEEecCCccC
Q 040705 458 WKQLLKDLNAHHVKVMTYCNPCLA 481 (850)
Q Consensus 458 p~~mi~~Lh~~G~k~~~~i~P~I~ 481 (850)
++.+.+.+|++|+|+.++.++++.
T Consensus 130 ~k~ladyiH~~GlKfGIy~d~G~~ 153 (427)
T PLN02229 130 IKLLADYVHSKGLKLGIYSDAGVF 153 (427)
T ss_pred HHHHHHHHHHCCCceEEeccCCCc
Confidence 999999999999999999999974
No 28
>PLN02808 alpha-galactosidase
Probab=97.90 E-value=0.00015 Score=81.99 Aligned_cols=124 Identities=15% Similarity=0.125 Sum_probs=86.4
Q ss_pred hCCCCCCch-hhccceeeeecCCHHHHHHHHHHHHhCCCC---ceeEEecc-cccccccccCceeeeeeeecCCCCcC-h
Q 040705 385 IGRPPELPD-WIVSGAVAGMQGGTDAVRRVWDALRSYQVP---VSAFWLQD-WVGQRETLIGSQLWWNWEVDTTRYKG-W 458 (850)
Q Consensus 385 tGrp~lpP~-Wa~~G~~lg~~~s~~~V~~v~~~~r~~~IP---~D~i~lDd-w~~~~~~~~G~~~~~~ft~d~~~FPd-p 458 (850)
.|....||. |..-. .++..-+++.+++.++.|.+.|+. .+.+.||| |+....+..| ++..|+++||+ .
T Consensus 26 ngla~tPpmGWnsW~-~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~G-----~~~~d~~rFP~G~ 99 (386)
T PLN02808 26 NGLGLTPQMGWNSWN-HFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQG-----NLVPKASTFPSGI 99 (386)
T ss_pred CcccCCCcceEEchH-HHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCCC-----CEeeChhhcCccH
Confidence 355666774 32100 012234889999999998776655 78899995 8765444445 68899999996 8
Q ss_pred HHHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHH
Q 040705 459 KQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQV 538 (850)
Q Consensus 459 ~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~ 538 (850)
+.+.+.+|++|+|+.+|.++...+-. + ..|.+..+...-
T Consensus 100 ~~lad~iH~~GlkfGiy~~~G~~tC~------------------------~-----------------~~pGs~~~e~~D 138 (386)
T PLN02808 100 KALADYVHSKGLKLGIYSDAGTLTCS------------------------K-----------------TMPGSLGHEEQD 138 (386)
T ss_pred HHHHHHHHHCCCceEEEecCCccccC------------------------C-----------------CCCcchHHHHHH
Confidence 99999999999999999988643110 0 123334555555
Q ss_pred HHHHHhcCccEEEecCC
Q 040705 539 LQEMVEDGVRGWMADFG 555 (850)
Q Consensus 539 l~~l~~~Gvdg~w~D~g 555 (850)
.+.+.+.|||.+|.|.+
T Consensus 139 A~~fA~WGvDylK~D~C 155 (386)
T PLN02808 139 AKTFASWGIDYLKYDNC 155 (386)
T ss_pred HHHHHHhCCCEEeecCc
Confidence 56677899999999976
No 29
>PLN02692 alpha-galactosidase
Probab=97.83 E-value=0.00025 Score=80.54 Aligned_cols=134 Identities=16% Similarity=0.133 Sum_probs=92.7
Q ss_pred HHHHHHHHHHhCCCCCCch-hhccceeeeecCCHHHHHHHHHHHHhCCCC---ceeEEecc-cccccccccCceeeeeee
Q 040705 375 CELIEHFTETIGRPPELPD-WIVSGAVAGMQGGTDAVRRVWDALRSYQVP---VSAFWLQD-WVGQRETLIGSQLWWNWE 449 (850)
Q Consensus 375 ~dvi~~Yt~LtGrp~lpP~-Wa~~G~~lg~~~s~~~V~~v~~~~r~~~IP---~D~i~lDd-w~~~~~~~~G~~~~~~ft 449 (850)
.|+......--|....||. |..-. .++..-+++.+++.++.+.+.|+. .+-+.||| |+....+..| +|.
T Consensus 40 ~~~~~~~~~~ngla~tPpmGWnSW~-~~~~~i~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~G-----~~~ 113 (412)
T PLN02692 40 SEILRRNLLANGLGITPPMGWNSWN-HFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEKG-----NLV 113 (412)
T ss_pred hhhhhhhcccCcCcCCCcceEEchh-hhCcccCHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCCC-----Cee
Confidence 4454444444666777775 33100 022234889999999988776654 77789996 8765544445 688
Q ss_pred ecCCCCcC-hHHHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCC
Q 040705 450 VDTTRYKG-WKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTH 528 (850)
Q Consensus 450 ~d~~~FPd-p~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~Dftn 528 (850)
.|+++||+ .+.+.+.+|++|+|+.+|.++...+ |. .+.
T Consensus 114 ~d~~kFP~G~k~ladyiH~~GLKfGIy~d~G~~t-C~----------------------------------------~~~ 152 (412)
T PLN02692 114 PKKSTFPSGIKALADYVHSKGLKLGIYSDAGYFT-CS----------------------------------------KTM 152 (412)
T ss_pred eChhhcCCcHHHHHHHHHHCCCceEEEecCCccc-cC----------------------------------------CCC
Confidence 89999996 9999999999999999999887531 10 012
Q ss_pred HHHHHHHHHHHHHHHhcCccEEEecCC
Q 040705 529 PDTASWFKQVLQEMVEDGVRGWMADFG 555 (850)
Q Consensus 529 P~a~~Ww~~~l~~l~~~Gvdg~w~D~g 555 (850)
|.+..++..-.+.+-+.|||.+|.|.+
T Consensus 153 pGS~g~e~~DA~~fA~WGvDylK~D~C 179 (412)
T PLN02692 153 PGSLGHEEQDAKTFASWGIDYLKYDNC 179 (412)
T ss_pred CCchHHHHHHHHHHHhcCCCEEecccc
Confidence 334555555556677899999999976
No 30
>PLN02899 alpha-galactosidase
Probab=97.64 E-value=0.0012 Score=77.80 Aligned_cols=144 Identities=12% Similarity=0.096 Sum_probs=85.9
Q ss_pred CCHHHHHHHHHHHHhCC---CCceeEEecc-ccccccc-----ccCc--e-eeeeeeecCCCCcC------hHHHHHHHH
Q 040705 405 GGTDAVRRVWDALRSYQ---VPVSAFWLQD-WVGQRET-----LIGS--Q-LWWNWEVDTTRYKG------WKQLLKDLN 466 (850)
Q Consensus 405 ~s~~~V~~v~~~~r~~~---IP~D~i~lDd-w~~~~~~-----~~G~--~-~~~~ft~d~~~FPd------p~~mi~~Lh 466 (850)
-++++|++.++- .+.| .-.+-+.||| |+..... ..|. + -+..+..|++|||+ .+.+.+.+|
T Consensus 45 I~E~~i~~~Ad~-vs~GLk~~GY~YVnIDDcW~~~~~~g~~~~s~g~~~~D~~GrLvPDp~RFPSs~~g~GmK~LADYVH 123 (633)
T PLN02899 45 VSEEEFLQNAEI-VSQRLLPFGYEYVVVDYLWYRKKVEGAYVDSLGFDVIDEWGRPIPDPGRWPSSRGGKGFTEVAEKVH 123 (633)
T ss_pred CCHHHHHHHHHH-HHcchHhhCCeEEEEccccccccccccccccccccccCCCCCCccCcccCCCCccCCCcHHHHHHHH
Confidence 378888887773 3333 2344577884 8754210 0010 0 12357789999994 899999999
Q ss_pred hcCceEEEecCCccCCCCCCCCccchh--------hHHHHhCCcEEecC--CCCeeEecCC-CCceEeccCCCHHHHHHH
Q 040705 467 AHHVKVMTYCNPCLAPSHEKPNRRRNL--------FEEAKKLDILVKDK--NGEQYLVPNT-AFDVGMLDLTHPDTASWF 535 (850)
Q Consensus 467 ~~G~k~~~~i~P~I~~~~~k~~~~~~~--------y~e~~~~g~fvk~~--~G~~y~~~~w-~g~~~~~DftnP~a~~Ww 535 (850)
++|+|+.+++++.+..... ..+.+. |++ .-.++-.+|- ..... .| +..---+|.+.+.+++|+
T Consensus 124 skGLKFGIY~~~Gi~tcA~--~~~~PI~gs~~g~~y~~-s~~~~~a~DIa~~~~tC---~w~~~g~~~vDa~~~~g~a~~ 197 (633)
T PLN02899 124 AMGLKFGIHVMRGISTQAV--NANTPILDAVKGGAYEE-SGRQWRAKDIALKERAC---AWMSHGFMSVNTKLGAGKAFL 197 (633)
T ss_pred hCCcceEEEecCCCccccc--ccCCccccccccccccc-cccccchhhcccccccc---ccCCCCcccccccccchhhhh
Confidence 9999999999999853210 011111 111 0011111110 00000 11 111124788889999999
Q ss_pred HHHHHHHHhcCccEEEecCC
Q 040705 536 KQVLQEMVEDGVRGWMADFG 555 (850)
Q Consensus 536 ~~~l~~l~~~Gvdg~w~D~g 555 (850)
....+.+-+.|||.+|.|..
T Consensus 198 ~Sla~tfAsWGVDyLKyD~c 217 (633)
T PLN02899 198 RSLYDQYAEWGVDFVKHDCV 217 (633)
T ss_pred HHHHHHHHHhCCCEEEEcCC
Confidence 99888888999999999953
No 31
>PLN02355 probable galactinol--sucrose galactosyltransferase 1
Probab=97.02 E-value=0.012 Score=70.96 Aligned_cols=204 Identities=13% Similarity=0.255 Sum_probs=113.4
Q ss_pred ecccceeeecCCcceEEEEEecceE---------EEEEEeCCCHHHHHHHHHHHhCCC---------CCCch-hhcccee
Q 040705 340 QGYDYSVFDLTRVDRVQIQIHGNSV---------QGRILHGNSPCELIEHFTETIGRP---------PELPD-WIVSGAV 400 (850)
Q Consensus 340 d~~~~~~fdl~~~~~v~~~~~gg~l---------d~y~~~G~tp~dvi~~Yt~LtGrp---------~lpP~-Wa~~G~~ 400 (850)
++...+.+.-+..+.+.+.++.|.. -.|+-.|++|-++++++.+.+=+. .-+|. --..||.
T Consensus 129 ~g~fra~Lqg~~~~~l~ic~eSG~~~v~~~~~~~~v~v~~g~dpy~li~~a~~~v~~hl~tf~~re~K~~P~~ld~~GWC 208 (758)
T PLN02355 129 EGDFRAVLQGNEHNELEICLESGDPAVDEFEGSHLVFVAAGSDPFDVITNAVKAVEKHLQTFSHRERKKMPDMLNWFGWC 208 (758)
T ss_pred CCceEEEEecCCCCcEEEEEEcCCCccccccCceEEEEEcCCCHHHHHHHHHHHHHHHhccccchhhccCCcccceeeEE
Confidence 4445555544445566666654432 346778999999999987654332 11342 1101432
Q ss_pred --eeec--CCHHHHHHHHHHHHhCCCCceeEEecc-ccccccccc--------Cce---eeeeeeecCCCCc--------
Q 040705 401 --AGMQ--GGTDAVRRVWDALRSYQVPVSAFWLQD-WVGQRETLI--------GSQ---LWWNWEVDTTRYK-------- 456 (850)
Q Consensus 401 --lg~~--~s~~~V~~v~~~~r~~~IP~D~i~lDd-w~~~~~~~~--------G~~---~~~~ft~d~~~FP-------- 456 (850)
-.|+ -+++.|++.++.+++.++|+.-+.||| |.....+.. |.+ .|-.|+-|. +||
T Consensus 209 TW~afy~~Vt~~~I~~~l~~l~~~g~p~~~viIDDGwQs~~~d~~~~~~~~~~~~q~~~rL~~f~~n~-KF~~~~~~~~~ 287 (758)
T PLN02355 209 TWDAFYTNVTAEGVKQGLESLEKGGVTPKFVIIDDGWQSVGMDPTGIECLADNSANFANRLTHIKENH-KFQKNGKEGHR 287 (758)
T ss_pred ehhHhhccCCHHHHHHHHHHHHhCCCCccEEEEeccccccccccccccccccccchhhhhhccccccc-ccccccccccc
Confidence 1222 378999999999999999999999995 654211100 111 123455444 555
Q ss_pred ------ChHHHHHHHHh-cCceEEEecCC------ccCCCCCCCCccchhhHHHH-----hCCcEEecCCCCeeEecC-C
Q 040705 457 ------GWKQLLKDLNA-HHVKVMTYCNP------CLAPSHEKPNRRRNLFEEAK-----KLDILVKDKNGEQYLVPN-T 517 (850)
Q Consensus 457 ------dp~~mi~~Lh~-~G~k~~~~i~P------~I~~~~~k~~~~~~~y~e~~-----~~g~fvk~~~G~~y~~~~-w 517 (850)
+++.+++.+++ .|+|.+-.-+- .|.+.. ..-+.|+... ..|+....++.. +.. .
T Consensus 288 ~~~~~~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~----~~~~~Y~~~~~~p~~spGv~~~~~~~a---~d~i~ 360 (758)
T PLN02355 288 VDDPALGLGHIVTEIKEKHSLKYVYVWHAITGYWGGVKPGV----AGMEHYESKMSYPVSSPGVQSNEPCDA---LESIT 360 (758)
T ss_pred ccCCCCcHHHHHHHHHhhcCCcEEEEeeeecceecCcCCCC----cccccccccccccccCCcccccCcchh---hhhcc
Confidence 67889999996 68887653222 222211 0111122111 112222111110 000 1
Q ss_pred CCceEeccCCCHH-HHHHHHHHHHHHHhcCccEEEecC
Q 040705 518 AFDVGMLDLTHPD-TASWFKQVLQEMVEDGVRGWMADF 554 (850)
Q Consensus 518 ~g~~~~~DftnP~-a~~Ww~~~l~~l~~~Gvdg~w~D~ 554 (850)
.+..+++ +|+ +.++|.+.+..|.+.||||.|.|-
T Consensus 361 ~~G~glv---~Pe~~~~FY~~~hsyL~s~GVDgVKVD~ 395 (758)
T PLN02355 361 TNGLGLV---NPEKVFSFYNELHSYLASAGIDGVKVDV 395 (758)
T ss_pred cCceecc---CHHHHHHHHHHHHHHHHHcCCCeEEEch
Confidence 1112333 555 678999899999999999999995
No 32
>PLN02219 probable galactinol--sucrose galactosyltransferase 2
Probab=96.94 E-value=0.016 Score=69.68 Aligned_cols=180 Identities=15% Similarity=0.232 Sum_probs=103.2
Q ss_pred EEEEeCCCHHHHHHHHHHHhCCC---------CCCchhhccceeeeec------CCHHHHHHHHHHHHhCCCCceeEEec
Q 040705 366 GRILHGNSPCELIEHFTETIGRP---------PELPDWIVSGAVAGMQ------GGTDAVRRVWDALRSYQVPVSAFWLQ 430 (850)
Q Consensus 366 ~y~~~G~tp~dvi~~Yt~LtGrp---------~lpP~Wa~~G~~lg~~------~s~~~V~~v~~~~r~~~IP~D~i~lD 430 (850)
.|+-.|++|-++++++.+.+-+- .-+|.|-- ||-+|-| -+++.|++.++.+.+.++|+.-+.||
T Consensus 160 v~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D-~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viID 238 (775)
T PLN02219 160 VYMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLD-WFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIID 238 (775)
T ss_pred EEEecCCCHHHHHHHHHHHHHHhcccccccccccCccccc-eeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEc
Confidence 35567999999999988765221 12566653 4333422 26889999999999999999999999
Q ss_pred c-ccccccc--------ccCce---eeeeeeecCC--------CCc-ChHHHHHHHHh-cCceEEEecCC------ccCC
Q 040705 431 D-WVGQRET--------LIGSQ---LWWNWEVDTT--------RYK-GWKQLLKDLNA-HHVKVMTYCNP------CLAP 482 (850)
Q Consensus 431 d-w~~~~~~--------~~G~~---~~~~ft~d~~--------~FP-dp~~mi~~Lh~-~G~k~~~~i~P------~I~~ 482 (850)
| |...... ..|.+ .|-.|+-|++ .|| +++.+++++++ .|+|.+-.-+- .|.+
T Consensus 239 DGwQsi~~~~~~~~~~~~~g~qf~~rL~~f~en~KF~~~~~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P 318 (775)
T PLN02219 239 DGWQQIENKEKDENCVVQEGAQFATRLTGIKENAKFQKNDQKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGVKP 318 (775)
T ss_pred cCccccccccccccccccccchhhhhhccccccccccccccccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCcCC
Confidence 5 7643221 01221 1334543332 355 68999999996 68886643222 2222
Q ss_pred CCCCCCccchhhHHHHhCCcEEecCC---CCe-eEec-CCCCceEeccCCCHHHHHHHHHHHHHHHhcCccEEEecC
Q 040705 483 SHEKPNRRRNLFEEAKKLDILVKDKN---GEQ-YLVP-NTAFDVGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADF 554 (850)
Q Consensus 483 ~~~k~~~~~~~y~e~~~~g~fvk~~~---G~~-y~~~-~w~g~~~~~DftnP~a~~Ww~~~l~~l~~~Gvdg~w~D~ 554 (850)
.. ..-+.|+.... |-+..++ .++ .... -..+..+++|- +++.++|.+.+..|.+.||||.|.|-
T Consensus 319 ~~----~~~~~Y~~~~~--~p~~spg~~~~~pd~a~d~l~~~G~glV~P--~~~~~FYd~~hsyLas~GVDgVKVDv 387 (775)
T PLN02219 319 AA----AGMEHYDSALA--YPVQSPGVLGNQPDIVMDSLSVHGLGLVNP--KKVFNFYNELHAYLASCGVDGVKVDV 387 (775)
T ss_pred CC----ccccccccccc--ccccCCCccccCcchhhhhhhhCCccccCH--HHHHHHHHHHHHHHHHcCCCEEEEch
Confidence 21 11122222110 1111110 001 0000 00112334431 35788999999999999999999994
No 33
>PLN02684 Probable galactinol--sucrose galactosyltransferase
Probab=96.22 E-value=0.11 Score=62.74 Aligned_cols=203 Identities=13% Similarity=0.182 Sum_probs=110.5
Q ss_pred ecccceeeecCCcceEEEEEecceE---------EEEEEeCCCHHHHHHHHHHHhCCC---------CCCchhhccceee
Q 040705 340 QGYDYSVFDLTRVDRVQIQIHGNSV---------QGRILHGNSPCELIEHFTETIGRP---------PELPDWIVSGAVA 401 (850)
Q Consensus 340 d~~~~~~fdl~~~~~v~~~~~gg~l---------d~y~~~G~tp~dvi~~Yt~LtGrp---------~lpP~Wa~~G~~l 401 (850)
++..++.+.=+..+.+.+-++.|.- -.|+-.|++|-++|++=.+..=+. .-+|.|-- +|-+
T Consensus 128 eg~fRa~Lqg~~~d~~~ic~eSg~~~v~~s~~~~~~~v~~g~~Py~~i~~a~~~v~~~l~tf~~reeK~~P~~~D-~fGW 206 (750)
T PLN02684 128 EGSFRACLQGNVNDELELCLESGDVDTKRSSFTHSLFIHAGTDPFQTITDAIRAVKLHLKSFRQRHEKKLPGIVD-YFGW 206 (750)
T ss_pred CCceEEEecCCCCCcEEEEEecCCccccccccceeEEEecCCCHHHHHHHHHHHHHHHhhccchhhhccCccccc-eeeE
Confidence 3344443322334555555554322 246777999999988753322111 12566653 4333
Q ss_pred eec------CCHHHHHHHHHHHHhCCCCceeEEecc-cccccccc-c------Cc---eeeeeeeecCCCCc-------C
Q 040705 402 GMQ------GGTDAVRRVWDALRSYQVPVSAFWLQD-WVGQRETL-I------GS---QLWWNWEVDTTRYK-------G 457 (850)
Q Consensus 402 g~~------~s~~~V~~v~~~~r~~~IP~D~i~lDd-w~~~~~~~-~------G~---~~~~~ft~d~~~FP-------d 457 (850)
|-| -+++.|++.++.+.+.++|..-+.||| |.....+. . +. +.+..|+-+ .+|| +
T Consensus 207 CTWdafy~dVt~~~I~~~l~~l~~~g~p~~~vIIDDGwQs~~~d~~~~~~~~~~~q~~~rL~~f~en-~KF~~~~~p~~G 285 (750)
T PLN02684 207 CTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFVIIDDGWQSVGGDPTVEAGDEKKEQPLLRLTGIKEN-EKFKKKDDPNVG 285 (750)
T ss_pred EEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEecccccccccccccccccccchhhhhhccCccc-cccccccCCCcc
Confidence 422 268999999999999999999999995 65432110 0 11 112345433 4564 6
Q ss_pred hHHHHHHHHh-cCceEEEecCC------ccCCCCCCCCccchhhHHH-----HhCCcEEecCC--CCeeEecCCCCceEe
Q 040705 458 WKQLLKDLNA-HHVKVMTYCNP------CLAPSHEKPNRRRNLFEEA-----KKLDILVKDKN--GEQYLVPNTAFDVGM 523 (850)
Q Consensus 458 p~~mi~~Lh~-~G~k~~~~i~P------~I~~~~~k~~~~~~~y~e~-----~~~g~fvk~~~--G~~y~~~~w~g~~~~ 523 (850)
++.++++|++ .|+|.+-.-+- .|.+.. ..-+.|+.. ...|+....++ +.... .++ .+
T Consensus 286 lk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~----~~~~~Y~s~~~~p~~s~gv~~~~p~~~~d~l~---~~g-~g- 356 (750)
T PLN02684 286 IKNIVNIAKEKHGLKYVYVWHAITGYWGGVRPGV----KEMEEYGSVMKYPNVSKGVVENDPTWKTDVMT---LQG-LG- 356 (750)
T ss_pred HHHHHHHHHhhcCCcEEEEEeeecccccccCCCC----cchhhccccccccccCccccccCccccccccc---cCc-cc-
Confidence 7899999984 68886643222 222211 011112110 01222222221 11100 011 12
Q ss_pred ccCCCH-HHHHHHHHHHHHHHhcCccEEEecCC
Q 040705 524 LDLTHP-DTASWFKQVLQEMVEDGVRGWMADFG 555 (850)
Q Consensus 524 ~DftnP-~a~~Ww~~~l~~l~~~Gvdg~w~D~g 555 (850)
+-+| ++.++|.+.+..|.+.||||.|.|-.
T Consensus 357 --lv~P~~~~~FYd~~hsyL~s~GVDgVKVD~Q 387 (750)
T PLN02684 357 --LVNPKKVYKFYNELHSYLADAGIDGVKVDVQ 387 (750)
T ss_pred --ccCHHHHHHHHHHHHHHHHHcCCCeEEEChh
Confidence 2334 56889999999999999999999953
No 34
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=95.94 E-value=0.083 Score=63.13 Aligned_cols=139 Identities=19% Similarity=0.265 Sum_probs=81.9
Q ss_pred CHHHHHHHHHHHHhCCCCceeEEecccccccccccCceeeee-eeecCCCCc---ChHHHHHHHHhcCceEEEecCCccC
Q 040705 406 GTDAVRRVWDALRSYQVPVSAFWLQDWVGQRETLIGSQLWWN-WEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPCLA 481 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~IP~D~i~lDdw~~~~~~~~G~~~~~~-ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~I~ 481 (850)
+-..+.+-++.+++ +-++++||---+.......|+-. -| +..|+ +|. +.++||+++|++|+|+|+=+-+.=.
T Consensus 26 dl~gi~~~Ldyl~~--LGv~~i~L~Pi~~~~~~~~gY~~-~dy~~vd~-~~Gt~~df~~Lv~~ah~~Gi~vilD~V~NH~ 101 (539)
T TIGR02456 26 DFPGLTSKLDYLKW--LGVDALWLLPFFQSPLRDDGYDV-SDYRAILP-EFGTIDDFKDFVDEAHARGMRVIIDLVLNHT 101 (539)
T ss_pred CHHHHHHhHHHHHH--CCCCEEEECCCcCCCCCCCCCCc-ccccccCh-hhCCHHHHHHHHHHHHHCCCEEEEEeccCcC
Confidence 44555555565655 45677887622111000112110 02 24443 354 5688999999999999996544321
Q ss_pred CCCCCCCccchhhHHHHh------CCcEEecCCCCeeEe----------cCCCC--------------ceEeccCCCHHH
Q 040705 482 PSHEKPNRRRNLFEEAKK------LDILVKDKNGEQYLV----------PNTAF--------------DVGMLDLTHPDT 531 (850)
Q Consensus 482 ~~~~k~~~~~~~y~e~~~------~g~fvk~~~G~~y~~----------~~w~g--------------~~~~~DftnP~a 531 (850)
....+.|+++.+ .++|+....++.+.. ..|.. ...-+|+.||++
T Consensus 102 ------s~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdln~~np~v 175 (539)
T TIGR02456 102 ------SDQHPWFQEARSNPDGPYRDFYVWSDTDEKYKDTRIIFVDTEKSNWTFDPVAKQYYWHRFFSHQPDLNYDNPAV 175 (539)
T ss_pred ------CCCCHHHHHHhhCCCCCCCceEEecCCCcccccccccccccCCCCccccCCcCeeEEecccCCCCccCCCCHHH
Confidence 234566666543 366765433322210 11210 112478889999
Q ss_pred HHHHHHHHHHHHhcCccEEEecC
Q 040705 532 ASWFKQVLQEMVEDGVRGWMADF 554 (850)
Q Consensus 532 ~~Ww~~~l~~l~~~Gvdg~w~D~ 554 (850)
++...+.++.+++.|||||=+|.
T Consensus 176 r~~l~~~~~~w~~~GvDGfRlDa 198 (539)
T TIGR02456 176 HDAVHDVMRFWLDLGVDGFRLDA 198 (539)
T ss_pred HHHHHHHHHHHHHcCCCEEEEec
Confidence 99999999999999999999996
No 35
>PLN02711 Probable galactinol--sucrose galactosyltransferase
Probab=95.67 E-value=0.29 Score=59.34 Aligned_cols=202 Identities=18% Similarity=0.208 Sum_probs=108.2
Q ss_pred ecccceeeecCCcceEEEEEecceE---------EEEEEeCCCHHHHHHHHHHH----hCCCC-----CCchhhccceee
Q 040705 340 QGYDYSVFDLTRVDRVQIQIHGNSV---------QGRILHGNSPCELIEHFTET----IGRPP-----ELPDWIVSGAVA 401 (850)
Q Consensus 340 d~~~~~~fdl~~~~~v~~~~~gg~l---------d~y~~~G~tp~dvi~~Yt~L----tGrp~-----lpP~Wa~~G~~l 401 (850)
++..++...-+..+.+.+-++.|.- -.|+-.|++|-++|++=.+. +|.-. -+|..- -+|-+
T Consensus 139 eg~fRa~Lq~~~~d~~~ic~esg~~~v~~~~~~~~~~i~~g~~Py~~i~~A~~~~~~~l~tf~~reeK~~P~~~-D~fGW 217 (777)
T PLN02711 139 EGPFRASLQPGEDDNVDICVESGSTKVCGSEFRSVLYMHAGDDPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIV-DKFGW 217 (777)
T ss_pred CCceEEEecCCCCCcEEEEEecCCcceeccccceEEEEEcCCCHHHHHHHHHHHHHHHhcccchhhhccCCccc-ccceE
Confidence 4444554444555666666554431 14677799999998764332 22211 134322 13323
Q ss_pred eec------CCHHHHHHHHHHHHhCCCCceeEEecc-ccccccc--c-----------cCce---eeeeeeec-------
Q 040705 402 GMQ------GGTDAVRRVWDALRSYQVPVSAFWLQD-WVGQRET--L-----------IGSQ---LWWNWEVD------- 451 (850)
Q Consensus 402 g~~------~s~~~V~~v~~~~r~~~IP~D~i~lDd-w~~~~~~--~-----------~G~~---~~~~ft~d------- 451 (850)
|-| -+++.|++-++.+++.|||..-+.||| |...... . .|.| .|-.|+-|
T Consensus 218 CTWdAfy~~Vt~egI~~gl~~L~~~Gip~~~vIIDDGWQsi~~d~~~~~~~~~~~~~~~g~q~~~rL~~f~en~KF~~~~ 297 (777)
T PLN02711 218 CTWDAFYLTVHPQGVWEGVKGLVDGGCPPGLVLIDDGWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENYKFRDYV 297 (777)
T ss_pred EehhHhcccCCHHHHHHHHHHHHhCCCCccEEEEcCCcccccccCcccccccccccccccchhhhhhccccccccccccc
Confidence 322 378999999999999999999999995 7642111 0 0111 12234433
Q ss_pred --CCCCc-ChHHHHHHHHhc--CceEEEecCC------ccCCCCCCCCccchhhHHHHhCCcEEecCCC-----CeeEec
Q 040705 452 --TTRYK-GWKQLLKDLNAH--HVKVMTYCNP------CLAPSHEKPNRRRNLFEEAKKLDILVKDKNG-----EQYLVP 515 (850)
Q Consensus 452 --~~~FP-dp~~mi~~Lh~~--G~k~~~~i~P------~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G-----~~y~~~ 515 (850)
+..|| +++.+++.|+++ |+|.+-.-+- .|.+.. +..++++ -++.+-.-| +.....
T Consensus 298 ~~~~~~p~Glk~~v~~iK~~~~~vk~VyVWHAL~GYWGGv~P~~-------~~~~~~~--~~~p~~spg~~~~~~d~~~d 368 (777)
T PLN02711 298 SPKSLSNKGMGAFIRDLKEEFKTVDYVYVWHALCGYWGGLRPNV-------PGLPESK--VVAPKLSPGLKMTMEDLAVD 368 (777)
T ss_pred cccCCCCCcHHHHHHHHHhhCCCCCEEEEeeeccCcccCcCCCC-------CCCccce--eeccccCccccccccccccc
Confidence 23344 578889999984 6877643222 222211 1111111 111111111 000000
Q ss_pred C-CCCceEeccCCCH-HHHHHHHHHHHHHHhcCccEEEecC
Q 040705 516 N-TAFDVGMLDLTHP-DTASWFKQVLQEMVEDGVRGWMADF 554 (850)
Q Consensus 516 ~-w~g~~~~~DftnP-~a~~Ww~~~l~~l~~~Gvdg~w~D~ 554 (850)
. .....++ -+| ++.++|.+.+..|.+.||||.|.|-
T Consensus 369 ~~~~~g~gl---v~Pe~~~~FY~~~hs~Las~GVDgVKVDv 406 (777)
T PLN02711 369 KIVNNGVGL---VPPELAYQMYEGLHSHLQSVGIDGVKVDV 406 (777)
T ss_pred ccccCcccc---cCHHHHHHHHHHHHHHHHHcCCCeEEEch
Confidence 0 0111122 344 4678999999999999999999994
No 36
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=95.56 E-value=0.065 Score=52.13 Aligned_cols=84 Identities=13% Similarity=0.220 Sum_probs=58.5
Q ss_pred HHHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCC-ceEeccCCCHHHHHHHHH
Q 040705 459 KQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAF-DVGMLDLTHPDTASWFKQ 537 (850)
Q Consensus 459 ~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g-~~~~~DftnP~a~~Ww~~ 537 (850)
.++|+..|+.|+|+++.++.... ...|+ .--.+++++++|++........ .-....++ ..-++...+
T Consensus 47 ge~v~a~h~~Girv~ay~~~~~d---------~~~~~--~HPeW~~~~~~G~~~~~~~~~~~~~~~~c~n-s~Y~e~~~~ 114 (132)
T PF14871_consen 47 GEQVEACHERGIRVPAYFDFSWD---------EDAAE--RHPEWFVRDADGRPMRGERFGYPGWYTCCLN-SPYREFLLE 114 (132)
T ss_pred HHHHHHHHHCCCEEEEEEeeecC---------hHHHH--hCCceeeECCCCCCcCCCCcCCCCceecCCC-ccHHHHHHH
Confidence 89999999999999999988742 12333 3457999999998622111111 12234444 345578888
Q ss_pred HHHHHHh-cCccEEEecC
Q 040705 538 VLQEMVE-DGVRGWMADF 554 (850)
Q Consensus 538 ~l~~l~~-~Gvdg~w~D~ 554 (850)
+++++++ ..+||+|+||
T Consensus 115 ~i~Ei~~~y~~DGiF~D~ 132 (132)
T PF14871_consen 115 QIREILDRYDVDGIFFDI 132 (132)
T ss_pred HHHHHHHcCCCCEEEecC
Confidence 8888875 8999999996
No 37
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=95.50 E-value=0.11 Score=55.98 Aligned_cols=136 Identities=20% Similarity=0.343 Sum_probs=81.8
Q ss_pred HHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeee-eecCCCCc---ChHHHHHHHHhcCceEEEecCCc-cCC
Q 040705 409 AVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNW-EVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPC-LAP 482 (850)
Q Consensus 409 ~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~f-t~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~-I~~ 482 (850)
.+.+-++.+++ +-+++|||- -+-... ...|+.. -|| ..|+ +|. +.++||+.+|++|+||++=+-+. .+
T Consensus 5 gi~~kLdyl~~--lGv~~I~l~Pi~~~~~-~~~gY~~-~d~~~vd~-~~Gt~~d~~~Lv~~~h~~gi~VilD~V~NH~~- 78 (316)
T PF00128_consen 5 GIIDKLDYLKD--LGVNAIWLSPIFESPN-GYHGYDP-SDYYAVDP-RFGTMEDFKELVDAAHKRGIKVILDVVPNHTS- 78 (316)
T ss_dssp HHHHTHHHHHH--HTESEEEESS-EESSS-STTTTSE-SEEEEEST-TTBHHHHHHHHHHHHHHTTCEEEEEEETSEEE-
T ss_pred HHHHhhHHHHH--cCCCceeccccccccc-ccccccc-eeeecccc-ccchhhhhhhhhhccccccceEEEeeeccccc-
Confidence 34444555665 457889986 222111 1233321 133 4554 565 67899999999999999976663 32
Q ss_pred CCCCCCccchhhHHHHh------CCcEEec-----CC--------CCeeEecCC------CCceEeccCCCHHHHHHHHH
Q 040705 483 SHEKPNRRRNLFEEAKK------LDILVKD-----KN--------GEQYLVPNT------AFDVGMLDLTHPDTASWFKQ 537 (850)
Q Consensus 483 ~~~k~~~~~~~y~e~~~------~g~fvk~-----~~--------G~~y~~~~w------~g~~~~~DftnP~a~~Ww~~ 537 (850)
..++.+.+..+ .++++-. ++ +..+....+ .....-+|+.||++++...+
T Consensus 79 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~i~~ 152 (316)
T PF00128_consen 79 ------DDHPWFQDSLNYFDNPYSDYYYWRDGEGSPPGNWYSYFGGSNWEYDDWGDEYQFWSDLPDLNYENPEVREYIID 152 (316)
T ss_dssp ------TTSHHHHHHHTHTTSTTGTTBEEESBTSTTSSTBBCSTTTSSEESCHHTHCHSSSTTSEEBETTSHHHHHHHHH
T ss_pred ------cccccccccccccccccccceeecccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhcc
Confidence 23444544332 3455421 11 122221111 11345688999999999999
Q ss_pred HHHHHHhcCccEEEecCCC
Q 040705 538 VLQEMVEDGVRGWMADFGE 556 (850)
Q Consensus 538 ~l~~l~~~Gvdg~w~D~gE 556 (850)
.++.+++.|||||-+|...
T Consensus 153 ~~~~w~~~giDGfR~D~~~ 171 (316)
T PF00128_consen 153 VLKFWIEEGIDGFRLDAAK 171 (316)
T ss_dssp HHHHHHHTTESEEEETTGG
T ss_pred cccchhhceEeEEEEcccc
Confidence 9999999999999999643
No 38
>PRK10785 maltodextrin glucosidase; Provisional
Probab=94.88 E-value=0.22 Score=60.25 Aligned_cols=138 Identities=12% Similarity=0.145 Sum_probs=81.4
Q ss_pred CCHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeee-eeecCCCCc---ChHHHHHHHHhcCceEEEecCCc
Q 040705 405 GGTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWN-WEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPC 479 (850)
Q Consensus 405 ~s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~-ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~ 479 (850)
|+-+.|.+-++-+++. -++++||- -.-.. ...|+-. -| +..|+ +|. +.++|++++|++|+|+|+=+-+.
T Consensus 176 GDl~GI~~kLdYL~~L--Gv~~I~L~Pif~s~--s~hgYd~-~Dy~~iDp-~~Gt~~df~~Lv~~aH~rGikVilD~V~N 249 (598)
T PRK10785 176 GDLDGISEKLPYLKKL--GVTALYLNPIFTAP--SVHKYDT-EDYRHVDP-QLGGDAALLRLRHATQQRGMRLVLDGVFN 249 (598)
T ss_pred cCHHHHHHHHHHHHHc--CCCEEEeCCcccCC--CCCCcCc-ccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3566666667777764 46778886 22111 0111100 01 23333 343 56899999999999999965443
Q ss_pred cCCCCCCCCccchhhHHHH-------------hCCcEEecCCCCeeEecCCCCceEec--cCCCHHHHHHHHH----HHH
Q 040705 480 LAPSHEKPNRRRNLFEEAK-------------KLDILVKDKNGEQYLVPNTAFDVGML--DLTHPDTASWFKQ----VLQ 540 (850)
Q Consensus 480 I~~~~~k~~~~~~~y~e~~-------------~~g~fvk~~~G~~y~~~~w~g~~~~~--DftnP~a~~Ww~~----~l~ 540 (850)
=. +..++.|++.. ..++|..+.+|. + ..|.+...+| |+.||+++++..+ .++
T Consensus 250 H~------~~~~~~f~~~~~~~~ga~~~~~spy~dwf~~~~~~~-~--~~w~g~~~lPdLN~~np~v~~~l~~~~~~v~~ 320 (598)
T PRK10785 250 HT------GDSHPWFDRHNRGTGGACHHPDSPWRDWYSFSDDGR-A--LDWLGYASLPKLDFQSEEVVNEIYRGEDSIVR 320 (598)
T ss_pred cC------CCCCHHHHHhhccccccccCCCCCcceeeEECCCCC-c--CCcCCCCcCccccCCCHHHHHHHHhhhhHHHH
Confidence 21 12345555432 234555554443 1 2444433444 5679999998874 677
Q ss_pred HHHhc--CccEEEecCCCC
Q 040705 541 EMVED--GVRGWMADFGEG 557 (850)
Q Consensus 541 ~l~~~--Gvdg~w~D~gE~ 557 (850)
..++. |||||=+|....
T Consensus 321 ~Wl~~~~giDG~RlDva~~ 339 (598)
T PRK10785 321 HWLKAPYNIDGWRLDVVHM 339 (598)
T ss_pred HhhcCCCCCcEEEEecHhH
Confidence 87764 999999996543
No 39
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=94.61 E-value=0.45 Score=52.97 Aligned_cols=138 Identities=13% Similarity=0.237 Sum_probs=82.4
Q ss_pred CHHHHHHHHHHHHhCCCCceeEEecccccccccccCcee--eee-eeecCC---CCcChHHHHHHHHhcCceEEEecCCc
Q 040705 406 GTDAVRRVWDALRSYQVPVSAFWLQDWVGQRETLIGSQL--WWN-WEVDTT---RYKGWKQLLKDLNAHHVKVMTYCNPC 479 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~IP~D~i~lDdw~~~~~~~~G~~~--~~~-ft~d~~---~FPdp~~mi~~Lh~~G~k~~~~i~P~ 479 (850)
+.+++.++++.+++.| +.+++++-+-. ..+.+.+.+ |.. .+..+. -|--.+.||++-|++|+++-.|+...
T Consensus 17 ~~~~~~~~l~~l~~~~--~N~V~~qVr~~-gda~Y~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevHAW~~~~ 93 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAG--FNAVFVQVRPR-GDALYPSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVHAWFRVG 93 (311)
T ss_pred CHHHHHHHHHHHHHcC--CCEEEEEEEeC-cEEEecccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEEEEEEee
Confidence 6788999999999999 77777773221 111222221 000 011111 12224789999999999999999444
Q ss_pred cCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHHh-cCccEEEec
Q 040705 480 LAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVE-DGVRGWMAD 553 (850)
Q Consensus 480 I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~-~Gvdg~w~D 553 (850)
+... ......+. ....+.++..|.......-.+...++|..+|+++++..+.++++++ ..|||+-+|
T Consensus 94 ~~~~-----~~~~~~~~--~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~YdvDGIhlD 161 (311)
T PF02638_consen 94 FNAP-----DVSHILKK--HPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYDVDGIHLD 161 (311)
T ss_pred cCCC-----chhhhhhc--CchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCCCCeEEec
Confidence 4321 11112111 1112333333333222111244679999999999999999999874 789999988
No 40
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=94.21 E-value=0.53 Score=52.36 Aligned_cols=133 Identities=15% Similarity=0.154 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHhCCCCceeEEecccccccccccCcee--eeeeeecCCCCcChHHHHHHHHhcCceEEEecCCccCCC
Q 040705 406 GTDAVRRVWDALRSYQVPVSAFWLQDWVGQRETLIGSQL--WWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPS 483 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~IP~D~i~lDdw~~~~~~~~G~~~--~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~~ 483 (850)
+.+.+.++++.+++.++-.=||=+.|-.|. ..+-++. --...-......|++++++.||++|+.++..|--+=
T Consensus 11 ~~~~~~~~~~~i~~t~lNavVIDvKdd~G~--i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~gIY~IARIv~Fk--- 85 (316)
T PF13200_consen 11 SPERLDKLLDLIKRTELNAVVIDVKDDDGN--ITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHGIYPIARIVVFK--- 85 (316)
T ss_pred CHHHHHHHHHHHHhcCCceEEEEEecCCce--EEecCCCchhhhcccccccccCHHHHHHHHHHCCCEEEEEEEEec---
Confidence 567788888888888765544433231111 0000000 000011122237999999999999999999875442
Q ss_pred CCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHHhcCccEEEecC
Q 040705 484 HEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADF 554 (850)
Q Consensus 484 ~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~~Gvdg~w~D~ 554 (850)
+ +...+. ...+-+++.+|+++.-. . .-.|+|.++++++++--++.++..+.|+|.+-+|.
T Consensus 86 ------D-~~la~~-~pe~av~~~~G~~w~d~--~-~~~WvnP~~~evw~Y~i~IA~Eaa~~GFdEIqfDY 145 (316)
T PF13200_consen 86 ------D-PVLAEA-HPEWAVKTKDGSVWRDN--E-GEAWVNPYSKEVWDYNIDIAKEAAKLGFDEIQFDY 145 (316)
T ss_pred ------C-hHHhhh-ChhhEEECCCCCcccCC--C-CCccCCCCCHHHHHHHHHHHHHHHHcCCCEEEeee
Confidence 1 122222 45577788888876421 1 25689999999999999999999999999999883
No 41
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=94.08 E-value=0.64 Score=55.79 Aligned_cols=142 Identities=19% Similarity=0.276 Sum_probs=81.0
Q ss_pred CHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeee-eeecCCCCc---ChHHHHHHHHhcCceEEEecCCcc
Q 040705 406 GTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWN-WEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPCL 480 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~-ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~I 480 (850)
+-..+.+-++.+++. -++++||- -+-... ...|+.. -| +..|+ +|. +.++||+.+|++|+|+++=+-+.=
T Consensus 31 dl~gi~~~ldyl~~l--Gv~~i~l~P~~~~~~-~~~gY~~-~d~~~id~-~~Gt~~d~~~lv~~~h~~gi~vilD~V~NH 105 (551)
T PRK10933 31 DLRGVTQRLDYLQKL--GVDAIWLTPFYVSPQ-VDNGYDV-ANYTAIDP-TYGTLDDFDELVAQAKSRGIRIILDMVFNH 105 (551)
T ss_pred CHHHHHHhhHHHHhC--CCCEEEECCCCCCCC-CCCCCCc-ccCCCcCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 345566666667654 46778886 321110 0112110 02 22332 343 578999999999999999665432
Q ss_pred CCCCCCCCccchhhHHHHh-----CCcEEecCCCC------eeE----ecCC--C----------C--ceEeccCCCHHH
Q 040705 481 APSHEKPNRRRNLFEEAKK-----LDILVKDKNGE------QYL----VPNT--A----------F--DVGMLDLTHPDT 531 (850)
Q Consensus 481 ~~~~~k~~~~~~~y~e~~~-----~g~fvk~~~G~------~y~----~~~w--~----------g--~~~~~DftnP~a 531 (850)
. +..++.|+++.+ .++|+-. +|. .+. +..| . + ...-+|+.||++
T Consensus 106 ~------s~~~~wf~~~~~~~~~y~d~y~~~-~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdLn~~np~V 178 (551)
T PRK10933 106 T------STQHAWFREALNKESPYRQFYIWR-DGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAV 178 (551)
T ss_pred c------cCchhHHHhhcCCCCCCcCceEec-CCCCCCCCCcccccCCCccccccCCCCceEeecccccCCccCCCCHHH
Confidence 1 123455555421 2455422 111 110 0001 0 0 122466789999
Q ss_pred HHHHHHHHHHHHhcCccEEEecCCCCCC
Q 040705 532 ASWFKQVLQEMVEDGVRGWMADFGEGLP 559 (850)
Q Consensus 532 ~~Ww~~~l~~l~~~Gvdg~w~D~gE~~p 559 (850)
++...+.++.+++.|||||=+|.-..++
T Consensus 179 ~~~l~~~~~~W~~~GvDGfRlDa~~~i~ 206 (551)
T PRK10933 179 RAELKKVCEFWADRGVDGLRLDVVNLIS 206 (551)
T ss_pred HHHHHHHHHHHHHCCCcEEEEcchhhcC
Confidence 9999999999999999999999765544
No 42
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=93.97 E-value=0.77 Score=55.04 Aligned_cols=143 Identities=16% Similarity=0.285 Sum_probs=83.1
Q ss_pred CHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeee-eeecCCCCc---ChHHHHHHHHhcCceEEEecCCcc
Q 040705 406 GTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWN-WEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPCL 480 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~-ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~I 480 (850)
+-..+.+-++.+++ +-++++||- -+-... ...|+.. .| +..|+ +|. +.+.||+.+|++|+|+++=+-|.=
T Consensus 25 ~~~gi~~~l~yl~~--lG~~~i~l~Pi~~~~~-~~~gY~~-~d~~~id~-~~Gt~~~~~~lv~~ah~~gi~vilD~v~NH 99 (543)
T TIGR02403 25 DLRGIIEKLDYLKK--LGVDYIWLNPFYVSPQ-KDNGYDV-SDYYAINP-LFGTMADFEELVSEAKKRNIKIMLDMVFNH 99 (543)
T ss_pred CHHHHHHhHHHHHH--cCCCEEEECCcccCCC-CCCCCCc-cccCccCc-ccCCHHHHHHHHHHHHHCCCEEEEEECccc
Confidence 44555565666665 456778886 322110 0112110 02 34444 354 578899999999999999765532
Q ss_pred CCCCCCCCccchhhHHHHh-----CCcEEe-cCCCCe---eE----ecCCCC--------------ceEeccCCCHHHHH
Q 040705 481 APSHEKPNRRRNLFEEAKK-----LDILVK-DKNGEQ---YL----VPNTAF--------------DVGMLDLTHPDTAS 533 (850)
Q Consensus 481 ~~~~~k~~~~~~~y~e~~~-----~g~fvk-~~~G~~---y~----~~~w~g--------------~~~~~DftnP~a~~ 533 (850)
. ..+++.|+++.+ +++|+- +..|.+ +. ...|.. ...-+|+.||++++
T Consensus 100 ~------~~~~~~f~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdln~~np~v~~ 173 (543)
T TIGR02403 100 T------STEHEWFKKALAGDSPYRDFYIWRDPKGKPPTNWQSKFGGSAWEYFGDTGQYYLHLFDKTQADLNWENPEVRE 173 (543)
T ss_pred c------ccchHHHHHhhcCCCcccCceEecCCCCCCCCcccccCCCcCccccCCCCceEEeccCCcCCccCCCCHHHHH
Confidence 1 134556665542 345542 222211 10 011211 11236788999999
Q ss_pred HHHHHHHHHHhcCccEEEecCCCCCC
Q 040705 534 WFKQVLQEMVEDGVRGWMADFGEGLP 559 (850)
Q Consensus 534 Ww~~~l~~l~~~Gvdg~w~D~gE~~p 559 (850)
...+.++.+++.|||||=+|.-..++
T Consensus 174 ~i~~~~~~W~~~giDGfRlDa~~~i~ 199 (543)
T TIGR02403 174 ELKDVVNFWRDKGVDGFRLDVINLIS 199 (543)
T ss_pred HHHHHHHHHHHcCCCEEEEeeehhhc
Confidence 99999999889999999999765443
No 43
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=93.37 E-value=0.69 Score=56.24 Aligned_cols=128 Identities=11% Similarity=0.029 Sum_probs=71.2
Q ss_pred HHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCc---ChHHHHHHHHhcCceEEEecCCc-cCCCCCCCC
Q 040705 414 WDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPC-LAPSHEKPN 488 (850)
Q Consensus 414 ~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~-I~~~~~k~~ 488 (850)
++.+++.| ++++||- ..-......+|+....-|..+ .+|. +.++||+.+|++|++|++-+-+. ...+
T Consensus 163 ~dyl~~LG--vt~i~L~Pi~e~~~~~~wGY~~~~y~~~~-~~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~~----- 234 (613)
T TIGR01515 163 IPYVKELG--FTHIELLPVAEHPFDGSWGYQVTGYYAPT-SRFGTPDDFMYFVDACHQAGIGVILDWVPGHFPKD----- 234 (613)
T ss_pred HHHHHHcC--CCEEEECCcccCCCCCCCCCCcccCcccc-cccCCHHHHHHHHHHHHHCCCEEEEEecccCcCCc-----
Confidence 46666654 5667775 211111112343211113332 3565 56899999999999999976553 3211
Q ss_pred ccchhhHHHHhCC-cEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHHh-cCccEEEecCC
Q 040705 489 RRRNLFEEAKKLD-ILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVE-DGVRGWMADFG 555 (850)
Q Consensus 489 ~~~~~y~e~~~~g-~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~-~Gvdg~w~D~g 555 (850)
...+....... |+..+... .+ ...|. ..-+|+.||+++++..+.++.+++ .|||||-+|.-
T Consensus 235 --~~~~~~~~~~~~y~~~~~~~-~~-~~~w~--~~~~~~~~~~Vr~~l~~~~~~W~~ey~iDG~R~D~v 297 (613)
T TIGR01515 235 --DHGLAEFDGTPLYEHKDPRD-GE-HWDWG--TLIFDYGRPEVRNFLVANALYWAEFYHIDGLRVDAV 297 (613)
T ss_pred --cchhhccCCCcceeccCCcc-Cc-CCCCC--CceecCCCHHHHHHHHHHHHHHHHHhCCcEEEEcCH
Confidence 11111000001 22222110 01 12232 346799999999999999999885 79999999963
No 44
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway [].
Probab=93.06 E-value=1.8 Score=53.02 Aligned_cols=183 Identities=16% Similarity=0.230 Sum_probs=95.5
Q ss_pred EEEEeCCCHHHHHHHHHHHh------C---CCCCCchhhccceeeeec------CCHHHHHHHHHHHHhCCCCceeEEec
Q 040705 366 GRILHGNSPCELIEHFTETI------G---RPPELPDWIVSGAVAGMQ------GGTDAVRRVWDALRSYQVPVSAFWLQ 430 (850)
Q Consensus 366 ~y~~~G~tp~dvi~~Yt~Lt------G---rp~lpP~Wa~~G~~lg~~------~s~~~V~~v~~~~r~~~IP~D~i~lD 430 (850)
.|+-.|.+|-++|++=.+.. . .-.-+|.|.- +|-+|-| -+.+.|++.++.+++.|||..-+.||
T Consensus 156 l~v~~g~dPy~~i~~A~~~~~~~l~tf~~r~~K~~P~~~d-~lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~~~~viID 234 (747)
T PF05691_consen 156 LYVHAGDDPYELIREAVKAVRKHLGTFRLREEKKYPEFLD-GLGWCTWDAFYQDVTEEGILEGLKSLEEGGIPPRFVIID 234 (747)
T ss_pred EEEeccCCHHHHHHHHHHHHHhcccccccccccchhhhhh-hhccccHHHhccccCHHHHHHHHHHHHhCCCCceEEEEe
Confidence 35557899999988743322 1 1113566542 3323322 36889999999999999999999999
Q ss_pred c-ccccccccc------------Cce---eeeeee------ecC-----CCCc-ChHHHHHHHHhc--CceEEEecCC--
Q 040705 431 D-WVGQRETLI------------GSQ---LWWNWE------VDT-----TRYK-GWKQLLKDLNAH--HVKVMTYCNP-- 478 (850)
Q Consensus 431 d-w~~~~~~~~------------G~~---~~~~ft------~d~-----~~FP-dp~~mi~~Lh~~--G~k~~~~i~P-- 478 (850)
| |........ |.+ -+..|+ -+. +.|| +++.+|++++++ |+|.+..-+-
T Consensus 235 DGWQ~~~~~~~~~~~~~~~~~~~g~q~~~rl~~~~en~kF~~~~~~~~~~~~~~GL~~~V~~ik~~~~~Ik~V~VWHAL~ 314 (747)
T PF05691_consen 235 DGWQSVDNDGDDPSKDGMNLVQEGAQFPRRLTDFKENSKFRAYKSGKSPEAFPSGLKHFVSDIKEKFPGIKYVYVWHALC 314 (747)
T ss_pred cchhcccccCcccccccccccccccccchhhhhhhhhhhhhhccCCCcccCCcccHHHHHHHHHhhCCCCCEEEEeehhc
Confidence 5 764321111 111 111221 111 2355 679999999986 7876653222
Q ss_pred ----ccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCH-HHHHHHHHHHHHHHhcCccEEEec
Q 040705 479 ----CLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHP-DTASWFKQVLQEMVEDGVRGWMAD 553 (850)
Q Consensus 479 ----~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP-~a~~Ww~~~l~~l~~~Gvdg~w~D 553 (850)
.|.++... ..++.+..--...|+-...++ ..+.... ..+ +=.-+| ++.+.|.+.+..|.+.||||.|.|
T Consensus 315 GYWgGi~P~~~~-~~~~k~~~~~~spg~~~~~~d---~~~d~~~-~~g-~glv~p~~~~~FYd~~hsyL~s~GVDgVKVD 388 (747)
T PF05691_consen 315 GYWGGISPDGML-AYNYKLVYPKLSPGLQGNMPD---LAVDSIV-KGG-LGLVDPEDAFRFYDDFHSYLASAGVDGVKVD 388 (747)
T ss_pred ceecCcCCCCcc-ccccceeecccCCcccccCcc---ccccccc-cCc-ccccCHHHHHHHHHHHHHHHHHcCCCEEEEc
Confidence 23221100 000100000000111000000 0000000 000 012345 477899999999999999999999
Q ss_pred CC
Q 040705 554 FG 555 (850)
Q Consensus 554 ~g 555 (850)
..
T Consensus 389 ~Q 390 (747)
T PF05691_consen 389 VQ 390 (747)
T ss_pred hh
Confidence 43
No 45
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.90 E-value=1.3 Score=51.07 Aligned_cols=144 Identities=15% Similarity=0.132 Sum_probs=88.9
Q ss_pred cceeeee-----cCCHHHHHHHHHHHHhCCCCceeEE--ecccccccccccCce--eeeee-e--ecCCCCcCh-HHHHH
Q 040705 397 SGAVAGM-----QGGTDAVRRVWDALRSYQVPVSAFW--LQDWVGQRETLIGSQ--LWWNW-E--VDTTRYKGW-KQLLK 463 (850)
Q Consensus 397 ~G~~lg~-----~~s~~~V~~v~~~~r~~~IP~D~i~--lDdw~~~~~~~~G~~--~~~~f-t--~d~~~FPdp-~~mi~ 463 (850)
+|.|+-- -.++.++.+.++++++.|+---.+. .+.+. .+-+. -|.+. + .-.+..-|| +.+|+
T Consensus 48 RGvWltn~~~~v~~~~~el~~~ld~l~~ln~NTv~~qV~~~G~~-----lypS~~~p~s~~~~~~~~~~~g~DpLa~~I~ 122 (418)
T COG1649 48 RGVWLTNADSRVLFQRQELKDILDDLQKLNFNTVYPQVWNDGDA-----LYPSAVLPWSDGLPGVLGVDPGYDPLAFVIA 122 (418)
T ss_pred eeEEEecCCCcccccHHHHHHHHHHHHHcCCceeEEEEecCccc-----cccccccccccCcCcccCCCCCCChHHHHHH
Confidence 5666542 1368899999999999987654332 22110 01111 01111 0 011222344 78999
Q ss_pred HHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEe-cCCCCceEeccCCCHHHHHHHHHHHHHH
Q 040705 464 DLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLV-PNTAFDVGMLDLTHPDTASWFKQVLQEM 542 (850)
Q Consensus 464 ~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~-~~w~g~~~~~DftnP~a~~Ww~~~l~~l 542 (850)
+-|++|+++..|++|+....+. ++. .............|..|.. ..|- .-.++|-.+|++++|..+.+-++
T Consensus 123 ~AHkr~l~v~aWf~~~~~a~~~-----s~~--~~~~p~~~~~~~~~~~~~~~~~~~-~~~~ldPg~Pevq~~i~~lv~ev 194 (418)
T COG1649 123 EAHKRGLEVHAWFNPYRMAPPT-----SPL--TKRHPHWLTTKRPGWVYVRHQGWG-KRVWLDPGIPEVQDFITSLVVEV 194 (418)
T ss_pred HHHhcCCeeeechhhcccCCCC-----Chh--HhhCCCCcccCCCCeEEEecCCce-eeeEeCCCChHHHHHHHHHHHHH
Confidence 9999999999999999864321 111 1222334444445555543 2221 56799999999999999988887
Q ss_pred H-hcCccEEEec
Q 040705 543 V-EDGVRGWMAD 553 (850)
Q Consensus 543 ~-~~Gvdg~w~D 553 (850)
+ ...|||+-+|
T Consensus 195 V~~YdvDGIQfD 206 (418)
T COG1649 195 VRNYDVDGIQFD 206 (418)
T ss_pred HhCCCCCceecc
Confidence 6 5789999888
No 46
>PLN00196 alpha-amylase; Provisional
Probab=92.73 E-value=0.79 Score=53.30 Aligned_cols=144 Identities=17% Similarity=0.204 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCc---ChHHHHHHHHhcCceEEEecCC-ccCC
Q 040705 408 DAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNP-CLAP 482 (850)
Q Consensus 408 ~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P-~I~~ 482 (850)
..+.+-++.+++.| +++|||- -.-.. ...|+...--|..|+.+|- +.++||+.+|++|+|+++=+-+ +.+.
T Consensus 44 ~~i~~kldyL~~LG--vtaIWL~P~~~s~--s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDvV~NH~~~ 119 (428)
T PLN00196 44 NFLMGKVDDIAAAG--ITHVWLPPPSHSV--SEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADIVINHRTA 119 (428)
T ss_pred HHHHHHHHHHHHcC--CCEEEeCCCCCCC--CCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEECccCccc
Confidence 45666677777655 6788986 22111 1123211012556666786 5788999999999999996533 3321
Q ss_pred CCCCCCccchhhHHHH---hCCcEEe--cCCCCeeE-----ecCCCCceEe--ccCCCHHHHHHHHHHHHHHH-hcCccE
Q 040705 483 SHEKPNRRRNLFEEAK---KLDILVK--DKNGEQYL-----VPNTAFDVGM--LDLTHPDTASWFKQVLQEMV-EDGVRG 549 (850)
Q Consensus 483 ~~~k~~~~~~~y~e~~---~~g~fvk--~~~G~~y~-----~~~w~g~~~~--~DftnP~a~~Ww~~~l~~l~-~~Gvdg 549 (850)
+.......+..|+.+. ..+++-. ..+.+.+. ...|.+...+ +|.+||++++...+.++-+. +.||||
T Consensus 120 ~~~~~~~~y~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~lpDLn~~np~V~~~l~~~~~wl~~~~GiDG 199 (428)
T PLN00196 120 EHKDGRGIYCLFEGGTPDSRLDWGPHMICRDDTQYSDGTGNLDTGADFAAAPDIDHLNKRVQRELIGWLLWLKSDIGFDA 199 (428)
T ss_pred ccccCCCceEECCCCCCCCccccccccCCCCcccccCCCCceeCCCCCCCCCccCCCCHHHHHHHHHHHHHHhhCCCCCE
Confidence 1100000011111110 0111100 00000010 0011111233 56679999999998877665 589999
Q ss_pred EEecCC
Q 040705 550 WMADFG 555 (850)
Q Consensus 550 ~w~D~g 555 (850)
|=+|+-
T Consensus 200 ~RlD~a 205 (428)
T PLN00196 200 WRLDFA 205 (428)
T ss_pred EEeehh
Confidence 999964
No 47
>PRK03705 glycogen debranching enzyme; Provisional
Probab=92.44 E-value=0.36 Score=58.98 Aligned_cols=92 Identities=18% Similarity=0.205 Sum_probs=60.7
Q ss_pred ChHHHHHHHHhcCceEEEecCC-ccCCCCCCCCccchh--hHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHH
Q 040705 457 GWKQLLKDLNAHHVKVMTYCNP-CLAPSHEKPNRRRNL--FEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTAS 533 (850)
Q Consensus 457 dp~~mi~~Lh~~G~k~~~~i~P-~I~~~~~k~~~~~~~--y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~ 533 (850)
+.++||+.+|++|++|++=+-. +.... +...+. ++......||..+.+|.. ..|.+.+.-+++.||++++
T Consensus 243 efk~LV~~~H~~GI~VIlDvV~NHt~~~----~~~~~~~~~~~~d~~~yy~~~~~g~~---~~~~g~g~~ln~~~p~Vr~ 315 (658)
T PRK03705 243 EFRDAVKALHKAGIEVILDVVFNHSAEL----DLDGPTLSLRGIDNRSYYWIREDGDY---HNWTGCGNTLNLSHPAVVD 315 (658)
T ss_pred HHHHHHHHHHHCCCEEEEEEcccCccCc----CCCCcchhcccCCCccceEECCCCCc---CCCCCccCcccCCCHHHHH
Confidence 4789999999999999996533 33210 011111 211122355555555542 2344444568889999999
Q ss_pred HHHHHHHHHHh-cCccEEEecCC
Q 040705 534 WFKQVLQEMVE-DGVRGWMADFG 555 (850)
Q Consensus 534 Ww~~~l~~l~~-~Gvdg~w~D~g 555 (850)
+..+.++.+++ .|||||=+|..
T Consensus 316 ~iid~l~~W~~e~gVDGFRfD~a 338 (658)
T PRK03705 316 WAIDCLRYWVETCHVDGFRFDLA 338 (658)
T ss_pred HHHHHHHHHHHHhCCCEEEEEcH
Confidence 99999999885 79999999953
No 48
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=92.31 E-value=0.33 Score=58.88 Aligned_cols=89 Identities=12% Similarity=0.104 Sum_probs=58.3
Q ss_pred ChHHHHHHHHhcCceEEEecCC-ccCCCCCCCCccchhhHHHHhCCcEEe-cCCCCeeEecCCCCceEeccCCCHHHHHH
Q 040705 457 GWKQLLKDLNAHHVKVMTYCNP-CLAPSHEKPNRRRNLFEEAKKLDILVK-DKNGEQYLVPNTAFDVGMLDLTHPDTASW 534 (850)
Q Consensus 457 dp~~mi~~Lh~~G~k~~~~i~P-~I~~~~~k~~~~~~~y~e~~~~g~fvk-~~~G~~y~~~~w~g~~~~~DftnP~a~~W 534 (850)
+.++||+.+|++|++|++=+-+ +.... ....|+.. ..+||.. +.+|... .+.+.+.-+++.||+++++
T Consensus 230 efk~lV~~~H~~Gi~VilDvV~NH~~~~------~~~~f~~~-~~~~~~~~~~~g~~~---~~~g~~~~~~~~~~~v~~~ 299 (605)
T TIGR02104 230 ELKQMIQALHENGIRVIMDVVYNHTYSR------EESPFEKT-VPGYYYRYNEDGTLS---NGTGVGNDTASEREMMRKF 299 (605)
T ss_pred HHHHHHHHHHHCCCEEEEEEEcCCccCC------CCCcccCC-CCCeeEEECCCCCcc---CCCcccCCcccCCHHHHHH
Confidence 4799999999999999996544 33211 11233322 2345543 4455321 1122233577889999999
Q ss_pred HHHHHHHHHh-cCccEEEecCC
Q 040705 535 FKQVLQEMVE-DGVRGWMADFG 555 (850)
Q Consensus 535 w~~~l~~l~~-~Gvdg~w~D~g 555 (850)
..+.++.+++ .|||||=+|.-
T Consensus 300 i~~~~~~W~~e~~iDGfR~D~~ 321 (605)
T TIGR02104 300 IVDSVLYWVKEYNIDGFRFDLM 321 (605)
T ss_pred HHHHHHHHHHHcCCCEEEEech
Confidence 9999988875 89999999954
No 49
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
Probab=91.56 E-value=0.56 Score=57.67 Aligned_cols=99 Identities=18% Similarity=0.212 Sum_probs=59.9
Q ss_pred ChHHHHHHHHhcCceEEEecCC-ccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHH
Q 040705 457 GWKQLLKDLNAHHVKVMTYCNP-CLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWF 535 (850)
Q Consensus 457 dp~~mi~~Lh~~G~k~~~~i~P-~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww 535 (850)
+.++||+.+|++|++|++=+-. +..... ... ....|+......||-.+.+...+ ...+.+.+.-+|+.||+++++.
T Consensus 246 efk~LV~~~H~~GI~VIlDvV~NHt~~~~-~~~-~~~~~~~~d~~~yy~~~~~~~~~-~~~~~g~gn~ln~~~p~vr~~i 322 (688)
T TIGR02100 246 EFKTMVRALHDAGIEVILDVVYNHTAEGN-ELG-PTLSFRGIDNASYYRLQPDDKRY-YINDTGTGNTLNLSHPRVLQMV 322 (688)
T ss_pred HHHHHHHHHHHCCCEEEEEECcCCccCcC-CCC-CcccccCCCCCcceEecCCCCce-ecCCCCccccccCCCHHHHHHH
Confidence 5799999999999999996544 222110 000 00111111112344434331111 1123334456899999999999
Q ss_pred HHHHHHHH-hcCccEEEecCCCCC
Q 040705 536 KQVLQEMV-EDGVRGWMADFGEGL 558 (850)
Q Consensus 536 ~~~l~~l~-~~Gvdg~w~D~gE~~ 558 (850)
.+.++.++ +.|||||=+|....+
T Consensus 323 ~d~l~~W~~e~gIDGfR~D~a~~l 346 (688)
T TIGR02100 323 MDSLRYWVTEMHVDGFRFDLATTL 346 (688)
T ss_pred HHHHHHHHHHcCCcEEEEechhhh
Confidence 99998887 589999999965443
No 50
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A.
Probab=91.14 E-value=0.63 Score=55.61 Aligned_cols=152 Identities=18% Similarity=0.352 Sum_probs=76.5
Q ss_pred CCCchhhccceeeeecC--CHHHHHHHHHHHHhCCCCceeEEecccccccccccCc------eeeeeeeecCCCC-cChH
Q 040705 389 PELPDWIVSGAVAGMQG--GTDAVRRVWDALRSYQVPVSAFWLQDWVGQRETLIGS------QLWWNWEVDTTRY-KGWK 459 (850)
Q Consensus 389 ~lpP~Wa~~G~~lg~~~--s~~~V~~v~~~~r~~~IP~D~i~lDdw~~~~~~~~G~------~~~~~ft~d~~~F-Pdp~ 459 (850)
.--|++ ||..++.. +.++..+.++.+.+. =|.++..-|||......... ..|-||. +++-+ .-.+
T Consensus 100 ~~fPRY---Gfls~f~~~~~~~~~~~~i~~L~~y--HIN~~QFYDW~~rH~~Pl~~~~~~~~~~w~D~~-~r~i~~~~Vk 173 (559)
T PF13199_consen 100 TRFPRY---GFLSDFDKSKSAEDIEAEIDQLNRY--HINGLQFYDWMYRHHKPLPGTNGQPDQTWTDWA-NRQISTSTVK 173 (559)
T ss_dssp TSS--E---EEE---GGGGGHHHHHHHHHHHHHT--T--EEEETS--SBTTB-S-SSS-EEE-TT-TTT---EEEHHHHH
T ss_pred ccCCcc---eEecCCCCcCCchhHHHHHHHHHhh--CcCeEEEEeeccccCCcCCCCCCchhhhhhhhc-CCEehHHHHH
Confidence 345665 55555643 467888889999884 45666666998765432211 1122221 11111 2348
Q ss_pred HHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEE-ecCCCC---eeEe-cCCCCceEeccCCCHHHHHH
Q 040705 460 QLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILV-KDKNGE---QYLV-PNTAFDVGMLDLTHPDTASW 534 (850)
Q Consensus 460 ~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fv-k~~~G~---~y~~-~~w~g~~~~~DftnP~a~~W 534 (850)
+.|+.+|+.|++.+.+.--+=.. ....+.++...+++ ++..+. .+-. ..|+..-.+.|-.||+=+++
T Consensus 174 ~yI~~ah~~Gmkam~Ynmiyaa~--------~~~~~~gv~~eW~ly~d~~~~~~~~~~l~~~w~s~lyl~dP~N~~WQ~y 245 (559)
T PF13199_consen 174 DYINAAHKYGMKAMAYNMIYAAN--------NNYEEDGVSPEWGLYKDDSHSNQDTYDLPDGWPSDLYLMDPGNPEWQNY 245 (559)
T ss_dssp HHHHHHHHTT-EEEEEEESSEEE--------TT--S--SS-GGBEEESSSBTSB-EEEETT-E--EEEEB-TT-HHHHHH
T ss_pred HHHHHHHHcCcceehhHhhhccc--------cCcccccCCchhhhhhccCCCccceeecCcccccceEEecCCCHHHHHH
Confidence 89999999999999984332111 11122333333333 444432 2333 34655568899999998888
Q ss_pred HHHHHHHHHh-cCccEEEecC
Q 040705 535 FKQVLQEMVE-DGVRGWMADF 554 (850)
Q Consensus 535 w~~~l~~l~~-~Gvdg~w~D~ 554 (850)
+.+..++.++ .|+|||-+|.
T Consensus 246 I~~q~~~~~~~~gFDG~hlDq 266 (559)
T PF13199_consen 246 IINQMNKAIQNFGFDGWHLDQ 266 (559)
T ss_dssp HHHHHHHHHHHHT--EEEEE-
T ss_pred HHHHHHHHHHccCCceEeeec
Confidence 8887777664 8999999984
No 51
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism]
Probab=90.96 E-value=2.2 Score=49.91 Aligned_cols=138 Identities=20% Similarity=0.332 Sum_probs=77.8
Q ss_pred CHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeee-eecCCCCc---ChHHHHHHHHhcCceEEEecCCcc
Q 040705 406 GTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNW-EVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPCL 480 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~f-t~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~I 480 (850)
+-.-+.+-++-+++. -++++||. -..... ...|+. .-|| ..|+ .|. |.+++++++|++|+|+++=+-..-
T Consensus 27 dl~Gi~~~LdYl~~L--Gv~aiwl~Pi~~s~~-~~~gY~-~~Dy~~id~-~~Gt~~d~~~li~~~H~~gi~vi~D~V~NH 101 (505)
T COG0366 27 DLKGITEKLDYLKEL--GVDAIWLSPIFESPQ-ADHGYD-VSDYTKVDP-HFGTEEDFKELVEEAHKRGIKVILDLVFNH 101 (505)
T ss_pred cHHhHHHhhhHHHHh--CCCEEEeCCCCCCCc-cCCCcc-ccchhhcCc-ccCCHHHHHHHHHHHHHCCCEEEEEeccCc
Confidence 444455555556554 46888886 222100 011211 0122 2233 565 678999999999999999764322
Q ss_pred CCCCCCCCccchhhHHHHhC-------CcEE-ecC--------------CCCeeEec------CCCCc--eEeccCCCHH
Q 040705 481 APSHEKPNRRRNLFEEAKKL-------DILV-KDK--------------NGEQYLVP------NTAFD--VGMLDLTHPD 530 (850)
Q Consensus 481 ~~~~~k~~~~~~~y~e~~~~-------g~fv-k~~--------------~G~~y~~~------~w~g~--~~~~DftnP~ 530 (850)
+ ...++.+.++.+. .+++ ++. .|..+... .+-+. ..-+++.||+
T Consensus 102 --~----s~~~~~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~ 175 (505)
T COG0366 102 --T----SDEHPWFKEARSSKPNPKRSDYYIWRDPDPDGTPPNNWFSVFGGDAWTWGNTGEYYLHLFSSEQPDLNWENPE 175 (505)
T ss_pred --C----CCccHHHHHHhcCCCCcccCCCceEccCcccCCCCCcchhhcCCCCCCcCCCCceEEEecCCCCCCcCCCCHH
Confidence 1 2345566665522 3444 110 11111000 00111 1236889999
Q ss_pred HHHHHHHHHHHHHhcCccEEEecC
Q 040705 531 TASWFKQVLQEMVEDGVRGWMADF 554 (850)
Q Consensus 531 a~~Ww~~~l~~l~~~Gvdg~w~D~ 554 (850)
++++..+.++.+++.|||||=+|-
T Consensus 176 v~~~~~~~~~~W~~~gvDGfRlDa 199 (505)
T COG0366 176 VREELLDVVKFWLDKGVDGFRLDA 199 (505)
T ss_pred HHHHHHHHHHHHHHcCCCeEEecc
Confidence 999999999999999999999884
No 52
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional
Probab=90.93 E-value=0.57 Score=61.14 Aligned_cols=97 Identities=14% Similarity=0.066 Sum_probs=59.7
Q ss_pred ChHHHHHHHHhcCceEEEecCC-ccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHH
Q 040705 457 GWKQLLKDLNAHHVKVMTYCNP-CLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWF 535 (850)
Q Consensus 457 dp~~mi~~Lh~~G~k~~~~i~P-~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww 535 (850)
+.++||+.+|++|++|++=+-+ +....+ ..... -.+.......||..+. +.+.....|.+.+..+|+.||.++++.
T Consensus 248 efk~lV~~~H~~GI~VILDvV~NHt~~~~-~~~p~-~~~~~~d~~~yy~~~~-~~~~~y~~~~G~gn~~n~~~p~v~~~i 324 (1221)
T PRK14510 248 EFAQAIKEAQSAGIAVILDVVFNHTGESN-HYGPT-LSAYGSDNSPYYRLEP-GNPKEYENWWGCGNLPNLERPFILRLP 324 (1221)
T ss_pred HHHHHHHHHHHCCCEEEEEEccccccCCC-CCCCc-ccccCCCCCCceEecC-CCCCcccCCCCCCCccccCCHHHHHHH
Confidence 5789999999999999996544 332111 00000 0011111122333222 211112234455668999999999999
Q ss_pred HHHHHHHHhcCccEEEecCCC
Q 040705 536 KQVLQEMVEDGVRGWMADFGE 556 (850)
Q Consensus 536 ~~~l~~l~~~Gvdg~w~D~gE 556 (850)
.+.++..++.|||||=+|...
T Consensus 325 ~d~lr~Wv~~gVDGfRfDla~ 345 (1221)
T PRK14510 325 MDVLRSWAKRGVDGFRLDLAD 345 (1221)
T ss_pred HHHHHHHHHhCCCEEEEechh
Confidence 999999888999999999543
No 53
>PLN02361 alpha-amylase
Probab=89.73 E-value=3.1 Score=47.98 Aligned_cols=143 Identities=16% Similarity=0.087 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCc---ChHHHHHHHHhcCceEEEecCCc-cCC
Q 040705 408 DAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPC-LAP 482 (850)
Q Consensus 408 ~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~-I~~ 482 (850)
..+.+-++.+++.| ++++||- -.-... ..|+...--|..| .+|. +.+.||+.+|++|+|+++=+-+. ...
T Consensus 29 ~~i~~kl~~l~~lG--~t~iwl~P~~~~~~--~~GY~~~d~y~~~-~~~Gt~~el~~li~~~h~~gi~vi~D~V~NH~~g 103 (401)
T PLN02361 29 RNLEGKVPDLAKSG--FTSAWLPPPSQSLA--PEGYLPQNLYSLN-SAYGSEHLLKSLLRKMKQYNVRAMADIVINHRVG 103 (401)
T ss_pred HHHHHHHHHHHHcC--CCEEEeCCCCcCCC--CCCCCcccccccC-cccCCHHHHHHHHHHHHHcCCEEEEEEccccccC
Confidence 45555566666655 5778885 221111 1222110013444 4565 57889999999999999855332 211
Q ss_pred CCCCCCccchhhHHHHhCCc---EE-ecCCCCe--eEecCCCCceEeccCCCHHHHHHHHHHHHHHHh-cCccEEEecCC
Q 040705 483 SHEKPNRRRNLFEEAKKLDI---LV-KDKNGEQ--YLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVE-DGVRGWMADFG 555 (850)
Q Consensus 483 ~~~k~~~~~~~y~e~~~~g~---fv-k~~~G~~--y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~-~Gvdg~w~D~g 555 (850)
........+..|.. ...++ -+ .+..|.. -.+..+. ...=+|.+||++++..++.++-+++ .|||||=+|+-
T Consensus 104 ~~~~~~~~y~~~~g-~~~~wd~~~~~~~~~g~~~~~~~~~~~-~lpDLd~~np~Vr~~l~~~~~wl~~~~GiDGfRlDav 181 (401)
T PLN02361 104 TTQGHGGMYNRYDG-IPLPWDEHAVTSCTGGLGNRSTGDNFN-GVPNIDHTQHFVRKDIIGWLIWLRNDVGFQDFRFDFA 181 (401)
T ss_pred CCCCCCCCcccCCC-CcCCCCccccccccCCCCCccCCCCCc-cCCccCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 10000111222210 00000 00 0001100 0000111 1234567799999999988877765 89999999975
Q ss_pred CC
Q 040705 556 EG 557 (850)
Q Consensus 556 E~ 557 (850)
..
T Consensus 182 k~ 183 (401)
T PLN02361 182 KG 183 (401)
T ss_pred cc
Confidence 43
No 54
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]
Probab=89.57 E-value=0.95 Score=55.40 Aligned_cols=94 Identities=20% Similarity=0.170 Sum_probs=64.8
Q ss_pred ChHHHHHHHHhcCceEEEec-CCccCCCCCCCCccchhhHHHHhCC-cEEecCCCCeeEecCCCCceEeccCCCHHHHHH
Q 040705 457 GWKQLLKDLNAHHVKVMTYC-NPCLAPSHEKPNRRRNLFEEAKKLD-ILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASW 534 (850)
Q Consensus 457 dp~~mi~~Lh~~G~k~~~~i-~P~I~~~~~k~~~~~~~y~e~~~~g-~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~W 534 (850)
+.|.||+.||+.||.|++=| -.+..-.++. ...-.|+ +...+ ||-.+++|... .+.|.+.-+..++|-+++|
T Consensus 266 EfK~mV~~lHkaGI~VILDVVfNHTae~~~~--g~t~~f~-~id~~~Yyr~~~dg~~~---N~TGcGNtln~~hpmvrk~ 339 (697)
T COG1523 266 EFKDMVKALHKAGIEVILDVVFNHTAEGNEL--GPTLSFR-GIDPNYYYRLDPDGYYS---NGTGCGNTLNTEHPMVRKL 339 (697)
T ss_pred HHHHHHHHHHHcCCEEEEEEeccCcccccCc--Ccccccc-cCCcCceEEECCCCCee---cCCccCcccccCChHHHHH
Confidence 45789999999999999853 4443210000 1112233 44555 56677776532 4455566899999999999
Q ss_pred HHHHHHHHH-hcCccEEEecCCC
Q 040705 535 FKQVLQEMV-EDGVRGWMADFGE 556 (850)
Q Consensus 535 w~~~l~~l~-~~Gvdg~w~D~gE 556 (850)
--+-|+.++ +..||||-.|+.-
T Consensus 340 ivDsLrYWv~e~hVDGFRFDLa~ 362 (697)
T COG1523 340 IVDSLRYWVEEYHVDGFRFDLAG 362 (697)
T ss_pred HHHHHHHHHHHhCCCceeecchh
Confidence 999999987 5899999999653
No 55
>PRK14705 glycogen branching enzyme; Provisional
Probab=89.43 E-value=3.3 Score=53.90 Aligned_cols=133 Identities=11% Similarity=0.054 Sum_probs=72.4
Q ss_pred HHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCc---ChHHHHHHHHhcCceEEEecCCccCCCCCC
Q 040705 411 RRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPCLAPSHEK 486 (850)
Q Consensus 411 ~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~I~~~~~k 486 (850)
.++++-+++.| ++.|||- -.-.....++|++...-|.. ..+|- |.+.||+.+|++|++|++=+-|.=...+
T Consensus 769 ~~lldYlk~LG--vt~IeLmPv~e~p~~~swGY~~~~y~ap-~~ryGt~~dfk~lVd~~H~~GI~VILD~V~nH~~~d-- 843 (1224)
T PRK14705 769 KELVDYVKWLG--FTHVEFMPVAEHPFGGSWGYQVTSYFAP-TSRFGHPDEFRFLVDSLHQAGIGVLLDWVPAHFPKD-- 843 (1224)
T ss_pred HHHHHHHHHhC--CCEEEECccccCCCCCCCCCCccccCCc-CcccCCHHHHHHHHHHHHHCCCEEEEEeccccCCcc--
Confidence 34566777755 5667764 11001112344432111222 23565 4688999999999999996655321110
Q ss_pred CCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHHh-cCccEEEecCC
Q 040705 487 PNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVE-DGVRGWMADFG 555 (850)
Q Consensus 487 ~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~-~Gvdg~w~D~g 555 (850)
..+....+...+....+...-..+.|. +..+||.+|+++++..+.+..+++ .+||||=.|.-
T Consensus 844 -----~~~l~~fdg~~~y~~~d~~~g~~~~Wg--~~~fn~~~~eVr~fli~~a~~Wl~eyhiDGfR~Dav 906 (1224)
T PRK14705 844 -----SWALAQFDGQPLYEHADPALGEHPDWG--TLIFDFGRTEVRNFLVANALYWLDEFHIDGLRVDAV 906 (1224)
T ss_pred -----hhhhhhcCCCcccccCCcccCCCCCCC--CceecCCCHHHHHHHHHHHHHHHHHhCCCcEEEeeh
Confidence 011111111111111111100123343 345899999999999998888775 69999999964
No 56
>PRK12313 glycogen branching enzyme; Provisional
Probab=88.67 E-value=2.3 Score=51.96 Aligned_cols=130 Identities=13% Similarity=0.105 Sum_probs=69.7
Q ss_pred HHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCc---ChHHHHHHHHhcCceEEEecCCc-cCCCCCCC
Q 040705 413 VWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPC-LAPSHEKP 487 (850)
Q Consensus 413 v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~-I~~~~~k~ 487 (850)
+++-+++.| ++++||- -+-......+|+....-|..++ +|- +.+.||+++|++|++|++=+-+. ...+.
T Consensus 176 ll~yl~~LG--v~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~-~~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~~~~--- 249 (633)
T PRK12313 176 LIPYVKEMG--YTHVEFMPLMEHPLDGSWGYQLTGYFAPTS-RYGTPEDFMYLVDALHQNGIGVILDWVPGHFPKDD--- 249 (633)
T ss_pred HHHHHHHcC--CCEEEeCchhcCCCCCCCCCCCcCcCcCCC-CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCc---
Confidence 346666654 5667775 2111111122322110123322 454 56899999999999999976543 32110
Q ss_pred CccchhhHHHHhCCcE-EecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHHh-cCccEEEecCCC
Q 040705 488 NRRRNLFEEAKKLDIL-VKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVE-DGVRGWMADFGE 556 (850)
Q Consensus 488 ~~~~~~y~e~~~~g~f-vk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~-~Gvdg~w~D~gE 556 (850)
..-..|+ ...++ ..++.. .+ ...|. +.-+|+.||++++...+.++.+++ .|||||=+|.-.
T Consensus 250 -~~~~~~~---~~~~~~~~~~~~-~~-~~~w~--~~~~n~~~~~vr~~l~~~~~~W~~~~~iDG~R~D~~~ 312 (633)
T PRK12313 250 -DGLAYFD---GTPLYEYQDPRR-AE-NPDWG--ALNFDLGKNEVRSFLISSALFWLDEYHLDGLRVDAVS 312 (633)
T ss_pred -ccccccC---CCcceeecCCCC-Cc-CCCCC--CcccCCCCHHHHHHHHHHHHHHHHHhCCcEEEEcChh
Confidence 0000110 00011 111110 11 11232 346799999999999999888875 699999999643
No 57
>PLN02784 alpha-amylase
Probab=87.21 E-value=4.2 Score=50.70 Aligned_cols=143 Identities=18% Similarity=0.156 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCc---ChHHHHHHHHhcCceEEEecCCc-cCC
Q 040705 408 DAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPC-LAP 482 (850)
Q Consensus 408 ~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~-I~~ 482 (850)
..+.+-++.+++.| ++++||- -.-.. ...|+....-|..| .+|. +.+.||+.+|++|+++++=+-+. ...
T Consensus 521 ~~I~ekldyL~~LG--~taIWLpP~~~s~--s~~GY~p~D~y~ld-s~yGT~~ELk~LI~a~H~~GIkVIlDiViNH~ag 595 (894)
T PLN02784 521 MELGEKAAELSSLG--FTVVWLPPPTESV--SPEGYMPKDLYNLN-SRYGTIDELKDLVKSFHEVGIKVLGDAVLNHRCA 595 (894)
T ss_pred HHHHHHHHHHHHhC--CCEEEeCCCCCCC--CCCCcCcccccccC-cCcCCHHHHHHHHHHHHHCCCEEEEEECcccccc
Confidence 46666677777765 5778886 22111 11232111013444 4565 67899999999999999865332 211
Q ss_pred CCCCCCccchhhHHHHhCCcEEecCCCCeeEec--CCCC----ceEeccCCCHHHHHHHHHHHHHHH-hcCccEEEecCC
Q 040705 483 SHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVP--NTAF----DVGMLDLTHPDTASWFKQVLQEMV-EDGVRGWMADFG 555 (850)
Q Consensus 483 ~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~--~w~g----~~~~~DftnP~a~~Ww~~~l~~l~-~~Gvdg~w~D~g 555 (850)
.....+..+..|..-..-+-.-...+...|.+. .+.+ ...-+|.+||++++-..+.++-++ +.|||||=+|+-
T Consensus 596 ~f~~~~g~~~~f~g~~dW~d~~i~~ddp~F~GrG~~~sgddf~~lPDLDh~npeVR~eL~~WlkWL~~e~G~DGfRLDaV 675 (894)
T PLN02784 596 HFQNQNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDLKEWLCWMRKEVGYDGWRLDFV 675 (894)
T ss_pred cccCCCCcccccCCeecCCCCcccCCCcccCCcCCcCcccccCcCCcCCCCCHHHHHHHHHHHHHHHhccCCCEEEEecc
Confidence 100000111111100000000000000011110 0111 123467789999998888777776 589999999974
No 58
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=87.19 E-value=2.9 Score=50.22 Aligned_cols=81 Identities=10% Similarity=0.047 Sum_probs=52.6
Q ss_pred ChHHHHHHHHhcCceEEEecCC-ccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCH---HHH
Q 040705 457 GWKQLLKDLNAHHVKVMTYCNP-CLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHP---DTA 532 (850)
Q Consensus 457 dp~~mi~~Lh~~G~k~~~~i~P-~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP---~a~ 532 (850)
+.++||+.+|++|++|++=+-+ +...+. ...+.| ..||-.+. ...| +.-+|+.|| +++
T Consensus 161 e~k~lV~~aH~~Gi~VilD~V~NH~~~~~----~~~~~~-----~~y~~~~~------~~~w---g~~~n~~~~~~~~vr 222 (542)
T TIGR02402 161 DLKALVDAAHGLGLGVILDVVYNHFGPEG----NYLPRY-----APYFTDRY------STPW---GAAINFDGPGSDEVR 222 (542)
T ss_pred HHHHHHHHHHHCCCEEEEEEccCCCCCcc----cccccc-----CccccCCC------CCCC---CCccccCCCcHHHHH
Confidence 4689999999999999996544 332110 000111 11442111 1123 234899999 999
Q ss_pred HHHHHHHHHHH-hcCccEEEecCC
Q 040705 533 SWFKQVLQEMV-EDGVRGWMADFG 555 (850)
Q Consensus 533 ~Ww~~~l~~l~-~~Gvdg~w~D~g 555 (850)
++..+.++.++ +.|||||-+|..
T Consensus 223 ~~i~~~~~~W~~e~~iDGfR~D~~ 246 (542)
T TIGR02402 223 RYILDNALYWLREYHFDGLRLDAV 246 (542)
T ss_pred HHHHHHHHHHHHHhCCcEEEEeCH
Confidence 99999888887 479999999853
No 59
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102).
Probab=86.51 E-value=2 Score=54.21 Aligned_cols=95 Identities=14% Similarity=0.114 Sum_probs=58.9
Q ss_pred ChHHHHHHHHhcCceEEEecC-CccCCCCCCCCccchhhHHHHhCCcEEec-CCCCeeEecCCCCceEeccCCCHHHHHH
Q 040705 457 GWKQLLKDLNAHHVKVMTYCN-PCLAPSHEKPNRRRNLFEEAKKLDILVKD-KNGEQYLVPNTAFDVGMLDLTHPDTASW 534 (850)
Q Consensus 457 dp~~mi~~Lh~~G~k~~~~i~-P~I~~~~~k~~~~~~~y~e~~~~g~fvk~-~~G~~y~~~~w~g~~~~~DftnP~a~~W 534 (850)
+.++||+.||++|++|++=+- .+..... ......++. ...+||.+. .+|...-..+ |.-.+..||.++++
T Consensus 405 Efk~mV~alH~~Gi~VIlDVVyNHt~~~g---~~~~s~ld~-~~P~YY~r~~~~G~~~n~~~----~~d~a~e~~~Vrk~ 476 (898)
T TIGR02103 405 EFREMVQALNKTGLNVVMDVVYNHTNASG---PNDRSVLDK-IVPGYYHRLNEDGGVENSTC----CSNTATEHRMMAKL 476 (898)
T ss_pred HHHHHHHHHHHCCCEEEEEeecccccccC---ccCcccccc-cCcHhhEeeCCCCCeecCCC----CcCCCCCCHHHHHH
Confidence 468899999999999999643 3332110 001122322 123566643 3444221111 23357789999999
Q ss_pred HHHHHHHHH-hcCccEEEecCCCCCC
Q 040705 535 FKQVLQEMV-EDGVRGWMADFGEGLP 559 (850)
Q Consensus 535 w~~~l~~l~-~~Gvdg~w~D~gE~~p 559 (850)
..+.++.++ +.|||||-+|.-..++
T Consensus 477 iiDsl~~W~~ey~VDGFRfDlm~~~~ 502 (898)
T TIGR02103 477 IVDSLVVWAKDYKVDGFRFDLMGHHP 502 (898)
T ss_pred HHHHHHHHHHHcCCCEEEEechhhCC
Confidence 999998876 6899999999544433
No 60
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).
Probab=86.34 E-value=1.6 Score=56.27 Aligned_cols=85 Identities=20% Similarity=0.248 Sum_probs=58.9
Q ss_pred ChHHHHHHHHhcCceEEEecCC-ccCCCCCCCCccchhhHHHHhCCcEE-ecCCCCeeEecCCCCceEeccCCCHHHHHH
Q 040705 457 GWKQLLKDLNAHHVKVMTYCNP-CLAPSHEKPNRRRNLFEEAKKLDILV-KDKNGEQYLVPNTAFDVGMLDLTHPDTASW 534 (850)
Q Consensus 457 dp~~mi~~Lh~~G~k~~~~i~P-~I~~~~~k~~~~~~~y~e~~~~g~fv-k~~~G~~y~~~~w~g~~~~~DftnP~a~~W 534 (850)
+.++||+.||++|++|++=+-+ +... ...|+.. ..+||. .+.+|..+. .+ .+.-++..||.++++
T Consensus 556 EfK~LV~alH~~GI~VILDVVyNHt~~--------~~~f~~~-~p~Yy~~~~~~G~~~~--~~--~g~~l~~e~~~vrk~ 622 (1111)
T TIGR02102 556 EFKNLINEIHKRGMGVILDVVYNHTAK--------VYIFEDL-EPNYYHFMDADGTPRT--SF--GGGRLGTTHEMSRRI 622 (1111)
T ss_pred HHHHHHHHHHHCCCEEEEecccccccc--------ccccccc-CCCceEeeCCCCCccc--cc--CCCCCCcCCHHHHHH
Confidence 4789999999999999996543 3221 1234432 235553 455666532 12 244578899999999
Q ss_pred HHHHHHHHH-hcCccEEEecC
Q 040705 535 FKQVLQEMV-EDGVRGWMADF 554 (850)
Q Consensus 535 w~~~l~~l~-~~Gvdg~w~D~ 554 (850)
..+.++.++ +.+||||-+|+
T Consensus 623 iiDsl~yWv~ey~VDGFRfDl 643 (1111)
T TIGR02102 623 LVDSIKYLVDEFKVDGFRFDM 643 (1111)
T ss_pred HHHHHHHHHHhcCCcEEEEec
Confidence 999988887 47999999995
No 61
>PRK05402 glycogen branching enzyme; Provisional
Probab=84.48 E-value=8.7 Score=47.85 Aligned_cols=128 Identities=10% Similarity=0.059 Sum_probs=69.4
Q ss_pred HHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCc---ChHHHHHHHHhcCceEEEecCCc-cCCCCCCC
Q 040705 413 VWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPC-LAPSHEKP 487 (850)
Q Consensus 413 v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~-I~~~~~k~ 487 (850)
+++-+++.| ++++||- -.-.....++|+....-|..++ +|- +.+.||+++|++|++|++=+-|. ...+
T Consensus 271 l~~ylk~LG--v~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~-~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~~~~---- 343 (726)
T PRK05402 271 LIPYVKEMG--FTHVELLPIAEHPFDGSWGYQPTGYYAPTS-RFGTPDDFRYFVDACHQAGIGVILDWVPAHFPKD---- 343 (726)
T ss_pred HHHHHHHcC--CCEEEECCcccCCCCCCCCCCcccCCCcCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC----
Confidence 346667755 5667775 2110111123322111123332 344 56889999999999999975543 2211
Q ss_pred CccchhhHHHHhCC-cEEecC-CCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHHh-cCccEEEecCC
Q 040705 488 NRRRNLFEEAKKLD-ILVKDK-NGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVE-DGVRGWMADFG 555 (850)
Q Consensus 488 ~~~~~~y~e~~~~g-~fvk~~-~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~-~Gvdg~w~D~g 555 (850)
...+..-.... |...++ .|. .+.|. +..+|+.||++++...+.++.+++ .|||||=+|.-
T Consensus 344 ---~~~~~~~~~~~~y~~~~~~~~~---~~~w~--~~~~n~~~~~v~~~l~~~~~~W~~e~~iDG~R~D~v 406 (726)
T PRK05402 344 ---AHGLARFDGTALYEHADPREGE---HPDWG--TLIFNYGRNEVRNFLVANALYWLEEFHIDGLRVDAV 406 (726)
T ss_pred ---ccchhccCCCcceeccCCcCCc---cCCCC--CccccCCCHHHHHHHHHHHHHHHHHhCCcEEEECCH
Confidence 00000000000 111111 010 12232 346799999999999998888875 79999999963
No 62
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type. Assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by PubMed:11333988 but challenged by PubMed:14679218. Members of this family from Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal), species lacking a conventional cysteinyl-tRNA synthetase (Cys--tRNA ligase), have been indicated to be a novel form of that enzyme, perhaps distantly related to class I tRNA ligases. The member from Thermotoga maritima is presumed to be a second isozyme of cysteinyl-tRNA synthetase. A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases.
Probab=84.44 E-value=2.3 Score=47.45 Aligned_cols=82 Identities=15% Similarity=0.074 Sum_probs=56.0
Q ss_pred HHHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHHh---CCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHH
Q 040705 459 KQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKK---LDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWF 535 (850)
Q Consensus 459 ~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~---~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww 535 (850)
++-|+.||+.|.+++.++.-+-. +..++.|++... ..++. .. -+.|++ ..++|+.+|+-++..
T Consensus 84 ~~~i~~Lk~~g~~viaYlSvGe~------E~~R~y~~~~~~~~~~~~l~-----~~--n~~W~g-~~~vd~~~~~W~~il 149 (315)
T TIGR01370 84 PEEIVRAAAAGRWPIAYLSIGAA------EDYRFYWQKGWKVNAPAWLG-----NE--DPDWPG-NYDVKYWDPEWKAIA 149 (315)
T ss_pred HHHHHHHHhCCcEEEEEEEchhc------cccchhhhhhhhcCCHHHhC-----CC--CCCCCC-ceeEecccHHHHHHH
Confidence 46678999999999998864431 233344444211 11111 11 246776 489999999988888
Q ss_pred HHHHHHHHhcCccEEEecC
Q 040705 536 KQVLQEMVEDGVRGWMADF 554 (850)
Q Consensus 536 ~~~l~~l~~~Gvdg~w~D~ 554 (850)
.+.++.+.+.|+||+.+|-
T Consensus 150 ~~rl~~l~~kGfDGvfLD~ 168 (315)
T TIGR01370 150 FSYLDRVIAQGFDGVYLDL 168 (315)
T ss_pred HHHHHHHHHcCCCeEeecc
Confidence 8888888899999999984
No 63
>PRK12568 glycogen branching enzyme; Provisional
Probab=84.40 E-value=7.1 Score=48.33 Aligned_cols=127 Identities=13% Similarity=0.112 Sum_probs=70.2
Q ss_pred HHHHHHHhCCCCceeEEeccccc-ccccccCceeeeeeeecCCCCc---ChHHHHHHHHhcCceEEEecCCccCCCCCCC
Q 040705 412 RVWDALRSYQVPVSAFWLQDWVG-QRETLIGSQLWWNWEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPCLAPSHEKP 487 (850)
Q Consensus 412 ~v~~~~r~~~IP~D~i~lDdw~~-~~~~~~G~~~~~~ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~ 487 (850)
++++-+++.| +..++|---+. ....++|++...-|..+ .+|. +.+.||+.+|++|++|++=+-|.=...+...
T Consensus 274 ~ll~ylk~LG--vt~I~LmPi~e~~~~~~wGY~~~~~~a~~-~~~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d~~~ 350 (730)
T PRK12568 274 QLIPYVQQLG--FTHIELLPITEHPFGGSWGYQPLGLYAPT-ARHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAHG 350 (730)
T ss_pred HHHHHHHHcC--CCEEEECccccCCCCCCCCCCCCcCCccC-cccCCHHHHHHHHHHHHHCCCEEEEEeccccCCccccc
Confidence 3456666655 45566641110 11112343221123333 3555 4688999999999999997655422111000
Q ss_pred ---CccchhhHHHHhCCcEEecC-CCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHH-hcCccEEEecC
Q 040705 488 ---NRRRNLFEEAKKLDILVKDK-NGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMV-EDGVRGWMADF 554 (850)
Q Consensus 488 ---~~~~~~y~e~~~~g~fvk~~-~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~-~~Gvdg~w~D~ 554 (850)
-....+|+. .++ .|. ...|. +..+|+.||+++++..+.++.++ +.+||||=+|.
T Consensus 351 l~~fdg~~~Ye~--------~d~~~g~---~~~W~--~~~~N~~~peVr~~li~~a~~Wl~eyhIDG~R~DA 409 (730)
T PRK12568 351 LAQFDGAALYEH--------ADPREGM---HRDWN--TLIYNYGRPEVTAYLLGSALEWIEHYHLDGLRVDA 409 (730)
T ss_pred cccCCCcccccc--------CCCcCCc---cCCCC--CeecccCCHHHHHHHHHHHHHHHHHhCceEEEEcC
Confidence 001112211 011 111 12342 34589999999999999888877 47999999995
No 64
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]
Probab=83.23 E-value=7.5 Score=43.91 Aligned_cols=69 Identities=22% Similarity=0.319 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHHhCC---CCceeEEecc-cccccccccCceeeeeeeecCCCCc-ChHHHHHHHHhcCceEEEecCCc
Q 040705 406 GTDAVRRVWDALRSYQ---VPVSAFWLQD-WVGQRETLIGSQLWWNWEVDTTRYK-GWKQLLKDLNAHHVKVMTYCNPC 479 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~---IP~D~i~lDd-w~~~~~~~~G~~~~~~ft~d~~~FP-dp~~mi~~Lh~~G~k~~~~i~P~ 479 (850)
++.-.+++++.+.+.| +-..-+.+|| |.+...+..| |+ .-|+++|| ..+++.+.+|.+|.|+.++.|-+
T Consensus 58 sE~l~~~~ad~mvseG~~~vGY~yi~iDDCW~e~~Rd~~g-rL----va~~~rFP~Gi~~ladyvHs~GLKlGiYsD~G 131 (414)
T KOG2366|consen 58 SEQLFKEMADAMVSEGLADVGYEYINIDDCWSEVTRDSDG-RL----VADPSRFPSGIKALADYVHSKGLKLGIYSDAG 131 (414)
T ss_pred hHHHHHHHHHHHHHhHHHhcCcEEEechhhhhhhccCCcc-cc----ccChhhcccchhhhhhchhhcCCceeeeeccC
Confidence 3556667777777644 5556677886 8766555556 43 45899999 47899999999999999987655
No 65
>PRK14706 glycogen branching enzyme; Provisional
Probab=82.89 E-value=10 Score=46.41 Aligned_cols=86 Identities=13% Similarity=0.059 Sum_probs=53.0
Q ss_pred ChHHHHHHHHhcCceEEEecCCc-cCCCCCCCCccchhhHHHHhC-C-cEEecC-CCCeeEecCCCCceEeccCCCHHHH
Q 040705 457 GWKQLLKDLNAHHVKVMTYCNPC-LAPSHEKPNRRRNLFEEAKKL-D-ILVKDK-NGEQYLVPNTAFDVGMLDLTHPDTA 532 (850)
Q Consensus 457 dp~~mi~~Lh~~G~k~~~~i~P~-I~~~~~k~~~~~~~y~e~~~~-g-~fvk~~-~G~~y~~~~w~g~~~~~DftnP~a~ 532 (850)
+.+.||+.+|++|++|++=+-+. ...+ .. .....+. - |...++ .|. -..|. ...+|+.||+++
T Consensus 218 ~~~~lv~~~H~~gi~VilD~v~nH~~~~-------~~-~l~~~dg~~~y~~~~~~~g~---~~~w~--~~~~~~~~~eVr 284 (639)
T PRK14706 218 DFKYLVNHLHGLGIGVILDWVPGHFPTD-------ES-GLAHFDGGPLYEYADPRKGY---HYDWN--TYIFDYGRNEVV 284 (639)
T ss_pred HHHHHHHHHHHCCCEEEEEecccccCcc-------hh-hhhccCCCcceeccCCcCCc---CCCCC--CcccCCCCHHHH
Confidence 56889999999999999965553 3211 00 0000000 0 111111 111 12232 345899999999
Q ss_pred HHHHHHHHHHH-hcCccEEEecCC
Q 040705 533 SWFKQVLQEMV-EDGVRGWMADFG 555 (850)
Q Consensus 533 ~Ww~~~l~~l~-~~Gvdg~w~D~g 555 (850)
++..+.++..+ +.+||||=+|.-
T Consensus 285 ~~l~~~~~~W~~e~~iDG~R~Dav 308 (639)
T PRK14706 285 MFLIGSALKWLQDFHVDGLRVDAV 308 (639)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeee
Confidence 99999888877 589999999953
No 66
>PRK13840 sucrose phosphorylase; Provisional
Probab=79.43 E-value=35 Score=40.61 Aligned_cols=135 Identities=12% Similarity=0.170 Sum_probs=75.7
Q ss_pred CHHHHHHHHHH-HHhCCCCceeEEeccccccccc-ccCceeeeee-eecCCCCcChHHHHHHHHhcCceEEEecCC-ccC
Q 040705 406 GTDAVRRVWDA-LRSYQVPVSAFWLQDWVGQRET-LIGSQLWWNW-EVDTTRYKGWKQLLKDLNAHHVKVMTYCNP-CLA 481 (850)
Q Consensus 406 s~~~V~~v~~~-~r~~~IP~D~i~lDdw~~~~~~-~~G~~~~~~f-t~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P-~I~ 481 (850)
+-..+.+.++. +++ + ++++||--.+..... ..|+-. -|| ..|+ +|-+++++.+-. +|+|+|+=+-+ ++
T Consensus 18 dL~gl~~kLd~yL~~--l-v~~vhllPff~psp~sD~GYdv-~DY~~VDP-~fGt~eDf~~L~--~giklmlDlV~NHt- 89 (495)
T PRK13840 18 GLKSLTALLDGRLDG--L-FGGVHILPFFYPIDGADAGFDP-IDHTKVDP-RLGDWDDVKALG--KTHDIMADLIVNHM- 89 (495)
T ss_pred CHhHHHHHHHHHHHH--H-hCeEEECCCccCCCCCCCCCCC-cChhhcCc-ccCCHHHHHHHH--hCCeEEEEECCCcC-
Confidence 45566666664 444 3 777877532211000 012110 022 3444 576666654444 38999885422 33
Q ss_pred CCCCCCCccchhhHHHHh-------CCcEEecC----C---------------CCeeE---ec------CCC-Cce--Ee
Q 040705 482 PSHEKPNRRRNLFEEAKK-------LDILVKDK----N---------------GEQYL---VP------NTA-FDV--GM 523 (850)
Q Consensus 482 ~~~~k~~~~~~~y~e~~~-------~g~fvk~~----~---------------G~~y~---~~------~w~-g~~--~~ 523 (850)
+..++.|+++.+ ++||+-.. + |.++. .. .|. |.. .=
T Consensus 90 ------S~~h~WFqd~l~~~~~s~Y~D~fi~~d~~~~~~~~~~~~~~if~~~~g~~~~~~~~~~~~~~~~w~tF~~~QpD 163 (495)
T PRK13840 90 ------SAESPQFQDVLAKGEASEYWPMFLTKDKVFPDGATEEDLAGIYRPRPGLPFTTYTLADGKTRLVWTTFTPQQID 163 (495)
T ss_pred ------CCCcHHHHHHHHhCCCCCccCeEEECCCCCcCCCCCcccccccCCCCCCcccceEecCCCceEEeccCCcccce
Confidence 346788888753 46776321 1 11110 00 111 212 23
Q ss_pred ccCCCHHHHHHHHHHHHHHHhcCccEEEecC
Q 040705 524 LDLTHPDTASWFKQVLQEMVEDGVRGWMADF 554 (850)
Q Consensus 524 ~DftnP~a~~Ww~~~l~~l~~~Gvdg~w~D~ 554 (850)
+|+.||++++...+.++.+++.|||||=+|.
T Consensus 164 LN~~NP~V~~~i~~il~fwl~~GVDgfRLDA 194 (495)
T PRK13840 164 IDVHSAAGWEYLMSILDRFAASHVTLIRLDA 194 (495)
T ss_pred eCCCCHHHHHHHHHHHHHHHHCCCCEEEEec
Confidence 5677999999999999999999999999995
No 67
>PLN02877 alpha-amylase/limit dextrinase
Probab=78.56 E-value=6.3 Score=50.08 Aligned_cols=94 Identities=15% Similarity=0.127 Sum_probs=57.0
Q ss_pred hHHHHHHHHhcCceEEEecCC-ccCCCCCCCCccchhhHHHHhCCcEEe-cCCCCeeEecCCCCceEeccCCCHHHHHHH
Q 040705 458 WKQLLKDLNAHHVKVMTYCNP-CLAPSHEKPNRRRNLFEEAKKLDILVK-DKNGEQYLVPNTAFDVGMLDLTHPDTASWF 535 (850)
Q Consensus 458 p~~mi~~Lh~~G~k~~~~i~P-~I~~~~~k~~~~~~~y~e~~~~g~fvk-~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww 535 (850)
.++||+.||++|++|++-+-. +.... . .......++. ...+||.+ +++|..--.. .+....-.++.++++.
T Consensus 468 fk~mV~~lH~~GI~VImDVVyNHt~~~-g-~~~~~s~ld~-~vP~YY~r~~~~G~~~ns~----c~n~~Ase~~mvrklI 540 (970)
T PLN02877 468 FRKMVQALNRIGLRVVLDVVYNHLHSS-G-PFDENSVLDK-IVPGYYLRRNSDGFIENST----CVNNTASEHYMVDRLI 540 (970)
T ss_pred HHHHHHHHHHCCCEEEEEECCccccCC-C-CcchhhcccC-CCCCceEEECCCCCcccCC----ccCCCccCCHHHHHHH
Confidence 789999999999999986533 33210 0 0000112222 23367665 4455421111 1223345678899999
Q ss_pred HHHHHHHH-hcCccEEEecCCCCC
Q 040705 536 KQVLQEMV-EDGVRGWMADFGEGL 558 (850)
Q Consensus 536 ~~~l~~l~-~~Gvdg~w~D~gE~~ 558 (850)
.+.++.++ +.+||||-+|..-.+
T Consensus 541 lDsl~yW~~ey~VDGFRFDlmg~i 564 (970)
T PLN02877 541 VDDLLNWAVNYKVDGFRFDLMGHL 564 (970)
T ss_pred HHHHHHHHHHhCCCEEEEEccccc
Confidence 99888876 589999999965443
No 68
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=78.49 E-value=3.3 Score=51.30 Aligned_cols=135 Identities=13% Similarity=0.054 Sum_probs=76.1
Q ss_pred HHHHHHHHhCCCCceeEEeccccc-ccccccCceeeeeeeecCCCCc---ChHHHHHHHHhcCceEEEecCCc-cCCCCC
Q 040705 411 RRVWDALRSYQVPVSAFWLQDWVG-QRETLIGSQLWWNWEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPC-LAPSHE 485 (850)
Q Consensus 411 ~~v~~~~r~~~IP~D~i~lDdw~~-~~~~~~G~~~~~~ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~-I~~~~~ 485 (850)
.+.++.+++.| +++|+|---+. ....++|+....-|..+ .+|. +.+.||+.+|++|++|++=+-+. ...+.
T Consensus 254 ~~~L~ylk~LG--~t~I~LmPi~e~~~~~~wGY~~~~~fa~~-~~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~~~- 329 (758)
T PLN02447 254 DDVLPRIKALG--YNAVQLMAIQEHAYYGSFGYHVTNFFAVS-SRSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNT- 329 (758)
T ss_pred HHHHHHHHHcC--CCEEEECCccccCCCCCCCcCcccCcccc-cccCCHHHHHHHHHHHHHCCCEEEEEeccccccccc-
Confidence 34566777665 45666641111 11123343311113332 3564 46889999999999999976553 32110
Q ss_pred CCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHHh-cCccEEEecCCCC
Q 040705 486 KPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVE-DGVRGWMADFGEG 557 (850)
Q Consensus 486 k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~-~Gvdg~w~D~gE~ 557 (850)
......|+ +....||-.+..|.. ..| ....+|+.+++++++..+.++.+++ .+||||-+|.-..
T Consensus 330 --~~gl~~fD-g~~~~Yf~~~~~g~~---~~w--~~~~~N~~~~eVr~fLl~~~~~Wl~ey~IDGfRfDaV~s 394 (758)
T PLN02447 330 --LDGLNGFD-GTDGSYFHSGPRGYH---WLW--DSRLFNYGNWEVLRFLLSNLRWWLEEYKFDGFRFDGVTS 394 (758)
T ss_pred --cccccccC-CCCccccccCCCCCc---CcC--CCceecCCCHHHHHHHHHHHHHHHHHhCcccccccchhh
Confidence 00111121 122234443332221 123 2346899999999999999998885 7999999986543
No 69
>PLN03244 alpha-amylase; Provisional
Probab=74.98 E-value=6.6 Score=48.55 Aligned_cols=89 Identities=15% Similarity=0.140 Sum_probs=56.9
Q ss_pred ChHHHHHHHHhcCceEEEecCC-ccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHH
Q 040705 457 GWKQLLKDLNAHHVKVMTYCNP-CLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWF 535 (850)
Q Consensus 457 dp~~mi~~Lh~~G~k~~~~i~P-~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww 535 (850)
+.+.||+.+|++|++|++=+-+ +...+. ...-..|+ +...-||-.+..|. -..|. +...|+.+|+++++.
T Consensus 442 DLK~LVD~aH~~GI~VILDvV~NH~~~d~---~~GL~~fD-Gt~~~Yf~~~~~g~---~~~WG--s~~fnyg~~EVr~FL 512 (872)
T PLN03244 442 DFKRLVDEAHGLGLLVFLDIVHSYAAADE---MVGLSLFD-GSNDCYFHTGKRGH---HKHWG--TRMFKYGDLDVLHFL 512 (872)
T ss_pred HHHHHHHHHHHCCCEEEEEecCccCCCcc---ccchhhcC-CCccceeccCCCCc---cCCCC--CceecCCCHHHHHHH
Confidence 5688999999999999996554 332211 00011111 11112333333332 12442 467899999999999
Q ss_pred HHHHHHHH-hcCccEEEecC
Q 040705 536 KQVLQEMV-EDGVRGWMADF 554 (850)
Q Consensus 536 ~~~l~~l~-~~Gvdg~w~D~ 554 (850)
.+.++.++ +.+||||-.|.
T Consensus 513 Lsna~yWleEyhIDGFRfDa 532 (872)
T PLN03244 513 ISNLNWWITEYQIDGFQFHS 532 (872)
T ss_pred HHHHHHHHHHhCcCcceeec
Confidence 99888877 68999999884
No 70
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=74.49 E-value=8.7 Score=45.37 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=28.7
Q ss_pred ccCCCHHHHHHHHHHHHHHHh-cCccEEEecCCCCC
Q 040705 524 LDLTHPDTASWFKQVLQEMVE-DGVRGWMADFGEGL 558 (850)
Q Consensus 524 ~DftnP~a~~Ww~~~l~~l~~-~Gvdg~w~D~gE~~ 558 (850)
+|..||++++...+.++.+++ .|||||=+|.-..+
T Consensus 203 Ln~~np~V~~~l~~~~~~w~~~~giDGfRlDavk~v 238 (479)
T PRK09441 203 IDFRHPEVREELKYWAKWYMETTGFDGFRLDAVKHI 238 (479)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCEEEEhhhcCC
Confidence 445689999999998888887 89999999965443
No 71
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism]
Probab=73.24 E-value=12 Score=44.90 Aligned_cols=136 Identities=17% Similarity=0.198 Sum_probs=72.4
Q ss_pred CCCCceeEEecccccccccccCceeeeeeeecCCCCc---ChHHHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHH
Q 040705 420 YQVPVSAFWLQDWVGQRETLIGSQLWWNWEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEE 496 (850)
Q Consensus 420 ~~IP~D~i~lDdw~~~~~~~~G~~~~~~ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e 496 (850)
+++.++++|+---...-+...|+.. -|++.=..+|. |.+++++.+|+.|+++|+-+-|.-..++..-=...+..+.
T Consensus 50 ~~lG~taiWisP~~~s~~~~~GY~~-~d~~~l~p~fGt~edf~~Li~~~h~~gi~ii~D~viNh~~~~~~wf~~~~~~~~ 128 (545)
T KOG0471|consen 50 KELGFTAIWLSPFTKSSKPDFGYDA-SDLEQLRPRFGTEEDFKELILAMHKLGIKIIADLVINHRSDEVEWFKASPTSKT 128 (545)
T ss_pred HhcCCceEEeCCCcCCCHHHhccCc-cchhhhcccccHHHHHHHHHHHHhhcceEEEEeeccccCCccccccccCccccc
Confidence 4577899998511111111122110 13333335676 6789999999999999998766544211000001111111
Q ss_pred HHhCCcEEecCC-----CC---ee------EecCCC------------C--ceEeccCCCHHHHHHHHHHHHH-HHhcCc
Q 040705 497 AKKLDILVKDKN-----GE---QY------LVPNTA------------F--DVGMLDLTHPDTASWFKQVLQE-MVEDGV 547 (850)
Q Consensus 497 ~~~~g~fvk~~~-----G~---~y------~~~~w~------------g--~~~~~DftnP~a~~Ww~~~l~~-l~~~Gv 547 (850)
+ -++++.-... |+ +. ....|+ + ...-+|+.||++++-+++.++. ..+.|+
T Consensus 129 ~-y~d~~~~~~~~~~~~g~~~~p~nw~~~~~~s~~~~~e~~~~~~l~~~~~~~pDln~~n~~V~~~~~~~l~~~~~~~gv 207 (545)
T KOG0471|consen 129 G-YEDWYPWHDGSSLDVGKRIPPLNWLSVFGGSAWPFDEGRQKYYLGQFAVLQPDLNYENPDVRKAIKEWLRDFWLEKGV 207 (545)
T ss_pred c-ceeeeeccCcccccccCCCCccchHhhhccccCcccccccceeccchhhcCCCCCCCCHHHHHHHHHHHHHHHhhcCC
Confidence 1 1122222211 11 00 011121 1 1234677899999999999994 568999
Q ss_pred cEEEecCCCC
Q 040705 548 RGWMADFGEG 557 (850)
Q Consensus 548 dg~w~D~gE~ 557 (850)
|||-.|+...
T Consensus 208 dGfRiD~v~~ 217 (545)
T KOG0471|consen 208 DGFRIDAVKG 217 (545)
T ss_pred CeEEEEcccc
Confidence 9999997654
No 72
>PLN02960 alpha-amylase
Probab=73.22 E-value=7.2 Score=48.88 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=76.2
Q ss_pred CHHHHH-HHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCc---ChHHHHHHHHhcCceEEEecCCc-
Q 040705 406 GTDAVR-RVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYK---GWKQLLKDLNAHHVKVMTYCNPC- 479 (850)
Q Consensus 406 s~~~V~-~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P~- 479 (850)
+-.++. ++++-+++.|| ++|||- -.-.....++|+....-|..+ .+|- +.+.||+.+|++|++|++=+-|.
T Consensus 414 tf~~~~e~~LdYLk~LGv--t~IeLmPv~e~~~~~swGY~~~~yfa~~-~~yGtp~dfk~LVd~aH~~GI~VILDvV~NH 490 (897)
T PLN02960 414 SFKEFTQKVLPHVKKAGY--NAIQLIGVQEHKDYSSVGYKVTNFFAVS-SRFGTPDDFKRLVDEAHGLGLLVFLDIVHSY 490 (897)
T ss_pred CHHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCCCCCcccCCCcc-cccCCHHHHHHHHHHHHHCCCEEEEEecccc
Confidence 334443 55777877764 557764 110011112343211112222 2444 46889999999999999966543
Q ss_pred cCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHH-hcCccEEEecCCC
Q 040705 480 LAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMV-EDGVRGWMADFGE 556 (850)
Q Consensus 480 I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~-~~Gvdg~w~D~gE 556 (850)
...+.. ..-..|+ +...-||-.+..|. -..|. +..+||.+|+++++..+.++.++ +.+||||-+|.-.
T Consensus 491 ~~~d~~---~~L~~FD-G~~~~Yf~~~~~g~---~~~WG--~~~fNy~~~eVr~fLlsna~yWl~EyhIDGfR~DAV~ 559 (897)
T PLN02960 491 AAADEM---VGLSLFD-GSNDCYFHSGKRGH---HKRWG--TRMFKYGDHEVLHFLLSNLNWWVTEYRVDGFQFHSLG 559 (897)
T ss_pred cCCccc---cchhhcC-CCccceeecCCCCc---cCCCC--CcccCCCCHHHHHHHHHHHHHHHHHHCCCceeecccc
Confidence 322110 0011121 11111333222221 12342 35689999999999999888877 5799999998543
No 73
>PF14885 GHL15: Hypothetical glycosyl hydrolase family 15
Probab=70.03 E-value=7.2 Score=34.65 Aligned_cols=57 Identities=21% Similarity=0.256 Sum_probs=41.2
Q ss_pred HhCCcEEecCCCCee-EecCCCCceEeccCCCHHHHHHHHHHHHH-HHhcCccEEEecC
Q 040705 498 KKLDILVKDKNGEQY-LVPNTAFDVGMLDLTHPDTASWFKQVLQE-MVEDGVRGWMADF 554 (850)
Q Consensus 498 ~~~g~fvk~~~G~~y-~~~~w~g~~~~~DftnP~a~~Ww~~~l~~-l~~~Gvdg~w~D~ 554 (850)
....+|.++.+|+.. .++..++.--..+..+|..+.||.+.+.+ +...++||+++|-
T Consensus 17 ~~~~w~a~~~~g~~i~~W~~~~~~~~~~~~~~~~~r~~w~~~v~e~~~~s~~DGv~~Dn 75 (79)
T PF14885_consen 17 PRADWFAKTANGSRISEWPGYPGHYQMYVWSCPDYRRYWVDAVVEELQNSPWDGVFADN 75 (79)
T ss_pred cCchhhccccCccceeecCCCCceeeeccCCcchHHHHHHHHHHHHHhcCccceeeeec
Confidence 445677788888776 34444444556677779999999996655 4567999999984
No 74
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism]
Probab=68.51 E-value=8.5 Score=46.91 Aligned_cols=91 Identities=16% Similarity=0.247 Sum_probs=61.8
Q ss_pred ChHHHHHHHHhcCceEEEe-cCCccCCCCCCCCccchhhHHHHh-CCcEEecCCCCeeEecCCCCceEeccCCCHHHHHH
Q 040705 457 GWKQLLKDLNAHHVKVMTY-CNPCLAPSHEKPNRRRNLFEEAKK-LDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASW 534 (850)
Q Consensus 457 dp~~mi~~Lh~~G~k~~~~-i~P~I~~~~~k~~~~~~~y~e~~~-~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~W 534 (850)
+.|.||+++|..|+-|++= |.-+.+.+ .......|+ +.+ ..||-.++.|- .+...+...+..+|++.+.
T Consensus 312 efK~lVd~aHs~GI~VlLDVV~sHaa~n---~~d~l~~fd-Gid~~~Yf~~~~r~~-----h~~~~~r~fn~~~~~V~rf 382 (757)
T KOG0470|consen 312 EFKELVDKAHSLGIEVLLDVVHSHAAKN---SKDGLNMFD-GIDNSVYFHSGPRGY-----HNSWCSRLFNYNHPVVLRF 382 (757)
T ss_pred HHHHHHHHHhhCCcEEehhhhhhhcccC---cCCcchhcc-CcCCceEEEeCCccc-----ccccccccccCCCHHHHHH
Confidence 5689999999999998874 44444321 112333443 455 44565555332 2334567899999999999
Q ss_pred HHHHHHHHH-hcCccEEEecCCC
Q 040705 535 FKQVLQEMV-EDGVRGWMADFGE 556 (850)
Q Consensus 535 w~~~l~~l~-~~Gvdg~w~D~gE 556 (850)
.-+.++..+ +..||||-.|..-
T Consensus 383 lL~nLr~WVtEY~vDGFRFD~~s 405 (757)
T KOG0470|consen 383 LLSNLRWWVTEYHVDGFRFDLVS 405 (757)
T ss_pred HHHHHHHHHHheeccceEEcchh
Confidence 888888766 5899999988543
No 75
>PRK09505 malS alpha-amylase; Reviewed
Probab=64.87 E-value=67 Score=39.86 Aligned_cols=30 Identities=17% Similarity=0.301 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHHHHh-cCccEEEecCCCC
Q 040705 528 HPDTASWFKQVLQEMVE-DGVRGWMADFGEG 557 (850)
Q Consensus 528 nP~a~~Ww~~~l~~l~~-~Gvdg~w~D~gE~ 557 (850)
||++++...+.++..++ .|||||=+|.-..
T Consensus 435 n~~Vr~yL~~~ik~Wv~e~GIDGfRlDaakh 465 (683)
T PRK09505 435 GYTPRDYLTHWLSQWVRDYGIDGFRVDTAKH 465 (683)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEechHh
Confidence 56888988888888885 7999999996443
No 76
>COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase [Carbohydrate transport and metabolism]
Probab=63.95 E-value=32 Score=37.63 Aligned_cols=106 Identities=14% Similarity=0.174 Sum_probs=66.3
Q ss_pred CCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceEEEecCCccCCCCCCCCccchhhHHHH
Q 040705 420 YQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSHEKPNRRRNLFEEAK 498 (850)
Q Consensus 420 ~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~ 498 (850)
..-|.+.+.+| .|.+.. + =|-..+=++.+++.|++++.++.-+-. .+|..| -
T Consensus 40 ~~~~f~llVVDps~~g~~--------------~---~~~~~eelr~~~~gg~~pIAYlsIg~a-------e~yR~Y---w 92 (300)
T COG2342 40 LNSPFDLLVVDPSYCGPF--------------N---TPWTIEELRTKADGGVKPIAYLSIGEA-------ESYRFY---W 92 (300)
T ss_pred hcCCCcEEEEeccccCCC--------------C---CcCcHHHHHHHhcCCeeEEEEEechhh-------hhhhhH---h
Confidence 45678888888 554321 1 123355677777889999999865543 234443 2
Q ss_pred hCCcEEecCCCCeeEe---cCCCCceEeccCCCHHHHHHHHHHHHHHHhcCccEEEecCCC
Q 040705 499 KLDILVKDKNGEQYLV---PNTAFDVGMLDLTHPDTASWFKQVLQEMVEDGVRGWMADFGE 556 (850)
Q Consensus 499 ~~g~fvk~~~G~~y~~---~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~~Gvdg~w~D~gE 556 (850)
++.+..+.++ +++ |.|+|. ..+-|=.|+=++-+.+.++++.+.|+||.-+|-=+
T Consensus 93 d~~w~~~~p~---wLg~edP~W~Gn-y~VkYW~~eWkdii~~~l~rL~d~GfdGvyLD~VD 149 (300)
T COG2342 93 DKYWLTGRPD---WLGEEDPEWPGN-YAVKYWEPEWKDIIRSYLDRLIDQGFDGVYLDVVD 149 (300)
T ss_pred hhhhhcCCcc---cccCCCCCCCCC-ceeeccCHHHHHHHHHHHHHHHHccCceEEEeeec
Confidence 2333332221 222 457763 44566678877778888889999999999988543
No 77
>TIGR03852 sucrose_gtfA sucrose phosphorylase. In the forward direction, this enzyme uses phosphate to cleave sucrose into D-fructose + alpha-D-glucose 1-phosphate. Characterized representatives from Streptococcus mutans and Bifidobacterium adolescentis represent well-separated branches of a molecular phylogenetic tree. In S. mutans, the region including this gene has been associated with neighboring transporter genes and multiple sugar metabolism.
Probab=63.85 E-value=65 Score=38.11 Aligned_cols=138 Identities=17% Similarity=0.203 Sum_probs=77.2
Q ss_pred CHHHHHHHHHHHHhCCCCceeEEecccccccccccCceeeeee-eecCCCCcChHHHHHHHHhcCceEEEecCCccCCCC
Q 040705 406 GTDAVRRVWDALRSYQVPVSAFWLQDWVGQRETLIGSQLWWNW-EVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSH 484 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~IP~D~i~lDdw~~~~~~~~G~~~~~~f-t~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~~~ 484 (850)
+...+..+++++-+.+ ++++||---+... ...|+- .-|| ..|+ +|-+++.+.+-.++ +|+|+= =.++.+
T Consensus 15 glgdl~g~l~~yL~~~--v~~i~LlPffps~-sD~GYd-v~DY~~VDP-~~Gt~~Df~~L~~~--~kvmlD--lV~NHt- 84 (470)
T TIGR03852 15 NLKELNKVLENYFKDA--VGGVHLLPFFPST-GDRGFA-PMDYTEVDP-AFGDWSDVEALSEK--YYLMFD--FMINHI- 84 (470)
T ss_pred ChhhHHHHHHHHHHHh--CCEEEECCCCcCC-CCCCcC-chhhceeCc-ccCCHHHHHHHHHh--hhHHhh--hccccc-
Confidence 4567777887666554 8889986211100 011211 0133 3444 67777666555444 555543 223222
Q ss_pred CCCCccchhhHHHHh-------CCcEEecC----CC----------------Ce---eEec------CC-CC--ceEecc
Q 040705 485 EKPNRRRNLFEEAKK-------LDILVKDK----NG----------------EQ---YLVP------NT-AF--DVGMLD 525 (850)
Q Consensus 485 ~k~~~~~~~y~e~~~-------~g~fvk~~----~G----------------~~---y~~~------~w-~g--~~~~~D 525 (850)
+..++.|+++.+ ++||+... ++ .+ +... .| .| .--=+|
T Consensus 85 ---S~~h~WFq~~~~~~~~s~y~d~fi~~~~~w~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~w~tF~~~QpDLN 161 (470)
T TIGR03852 85 ---SRQSEYYQDFLEKKDNSKYKDLFIRYKDFWPNGRPTQEDVDLIYKRKDRAPYQEVTFADGSTEKVWNTFGEEQIDLD 161 (470)
T ss_pred ---ccchHHHHHHHhcCCCCCccceEEecccccCCCCccccccccccCCCCCCCCCceEEcCCCCeEEEccCCccccccC
Confidence 356788888653 36777221 11 00 0000 01 01 122356
Q ss_pred CCCHHHHHHHHHHHHHHHhcCccEEEecCCC
Q 040705 526 LTHPDTASWFKQVLQEMVEDGVRGWMADFGE 556 (850)
Q Consensus 526 ftnP~a~~Ww~~~l~~l~~~Gvdg~w~D~gE 556 (850)
|.||++++...+.++.+++.|||||=+|.--
T Consensus 162 ~~np~v~e~i~~il~fwl~~GvdgfRLDAv~ 192 (470)
T TIGR03852 162 VTSETTKRFIRDNLENLAEHGASIIRLDAFA 192 (470)
T ss_pred CCCHHHHHHHHHHHHHHHHcCCCEEEEecch
Confidence 7799999999999999999999999999643
No 78
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=62.05 E-value=56 Score=39.91 Aligned_cols=135 Identities=12% Similarity=0.073 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHhCCCCceeEE-ecccccccccccCceeeeeeeecCCCCcC---hHHHHHHHHhcCceEEEecCC-ccC
Q 040705 407 TDAVRRVWDALRSYQVPVSAFW-LQDWVGQRETLIGSQLWWNWEVDTTRYKG---WKQLLKDLNAHHVKVMTYCNP-CLA 481 (850)
Q Consensus 407 ~~~V~~v~~~~r~~~IP~D~i~-lDdw~~~~~~~~G~~~~~~ft~d~~~FPd---p~~mi~~Lh~~G~k~~~~i~P-~I~ 481 (850)
-+.+.+.+..+++.||-+--+- +-..= ..-++|++...-|. -..+|-. .+.+|+..|++||-|++=+-| +..
T Consensus 164 ~e~a~~llpYl~elG~T~IELMPv~e~p--~~~sWGYq~~g~yA-p~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~ 240 (628)
T COG0296 164 FELAIELLPYLKELGITHIELMPVAEHP--GDRSWGYQGTGYYA-PTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFP 240 (628)
T ss_pred HHHHHHHhHHHHHhCCCEEEEcccccCC--CCCCCCCCcceecc-ccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCC
Confidence 4566677778888876432211 00111 11234444222222 2346754 578999999999999995544 443
Q ss_pred CCCCCCCccchhhHHHHhCCcEEe-cCCCCeeEecCCCCceEeccCC-CHHHHHHHHHHHHHHH-hcCccEEEecCCC
Q 040705 482 PSHEKPNRRRNLFEEAKKLDILVK-DKNGEQYLVPNTAFDVGMLDLT-HPDTASWFKQVLQEMV-EDGVRGWMADFGE 556 (850)
Q Consensus 482 ~~~~k~~~~~~~y~e~~~~g~fvk-~~~G~~y~~~~w~g~~~~~Dft-nP~a~~Ww~~~l~~l~-~~Gvdg~w~D~gE 556 (850)
++. ..+. .- .|.+.. .++ +..+...+. +..+++. .+++|.+.-+.....+ +..|||+-.|.-.
T Consensus 241 ~d~------~~L~--~f-dg~~~~e~~~--~~~~~~~~W-g~~i~~~gr~EVR~Fll~nal~Wl~~yHiDGlRvDAV~ 306 (628)
T COG0296 241 PDG------NYLA--RF-DGTFLYEHED--PRRGEHTDW-GTAIFNYGRNEVRNFLLANALYWLEEYHIDGLRVDAVA 306 (628)
T ss_pred CCc------chhh--hc-CCccccccCC--cccccCCCc-ccchhccCcHHHHHHHHHHHHHHHHHhCCcceeeehhh
Confidence 211 1111 00 111111 111 111111111 3344444 9999999988666555 5799999988533
No 79
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=57.85 E-value=34 Score=38.90 Aligned_cols=124 Identities=15% Similarity=0.209 Sum_probs=70.5
Q ss_pred CHHHHHHHHHHHHhCCCCceeEEeccc--ccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceEEEecCCccCCC
Q 040705 406 GTDAVRRVWDALRSYQVPVSAFWLQDW--VGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPS 483 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~IP~D~i~lDdw--~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~~ 483 (850)
..+++.+-++.+++.||-+-.+..=.| +...+ | .| .|.....+++.+++.|+|+++.+-..-
T Consensus 8 ~~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~e---G-----~y-----dF~~lD~~l~~a~~~Gi~viL~~~~~~--- 71 (374)
T PF02449_consen 8 PEEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEE---G-----QY-----DFSWLDRVLDLAAKHGIKVILGTPTAA--- 71 (374)
T ss_dssp -CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBT---T-----B--------HHHHHHHHHHHCTT-EEEEEECTTT---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEechhhccCCC---C-----ee-----ecHHHHHHHHHHHhccCeEEEEecccc---
Confidence 457888999999999887766532134 33322 3 12 233478999999999999998764322
Q ss_pred CCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHHh-----cCccEEEecCCCC
Q 040705 484 HEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVE-----DGVRGWMADFGEG 557 (850)
Q Consensus 484 ~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~-----~Gvdg~w~D~gE~ 557 (850)
.|.+-.-+--+....+.+|....... ....++.+|..++.....++.+.+ -.|-||-+| ||+
T Consensus 72 -------~P~Wl~~~~Pe~~~~~~~g~~~~~g~----~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~-NE~ 138 (374)
T PF02449_consen 72 -------PPAWLYDKYPEILPVDADGRRRGFGS----RQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQID-NEP 138 (374)
T ss_dssp -------S-HHHHCCSGCCC-B-TTTSBEECCC----STT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEC-CST
T ss_pred -------cccchhhhcccccccCCCCCcCccCC----ccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEec-ccc
Confidence 12232211123445566676542211 224578999999888877766542 346777776 664
No 80
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=56.76 E-value=33 Score=37.61 Aligned_cols=65 Identities=11% Similarity=0.210 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceEEEecCC
Q 040705 406 GTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNP 478 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P 478 (850)
+.+..++.++-..++||+.-. +| .|.+.... .. +|++- ...-.+.+++++.-+++|+++.+|.+-
T Consensus 30 ~t~~~k~yIDfAa~~G~eYvl--vD~GW~~~~~~---~~--~d~~~-~~~~~dl~elv~Ya~~KgVgi~lw~~~ 95 (273)
T PF10566_consen 30 TTETQKRYIDFAAEMGIEYVL--VDAGWYGWEKD---DD--FDFTK-PIPDFDLPELVDYAKEKGVGIWLWYHS 95 (273)
T ss_dssp SHHHHHHHHHHHHHTT-SEEE--EBTTCCGS--T---TT----TT--B-TT--HHHHHHHHHHTT-EEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEE--ecccccccccc---cc--ccccc-cCCccCHHHHHHHHHHcCCCEEEEEeC
Confidence 788999999999999998855 47 67531110 00 12221 111247899999999999999999753
No 81
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds
Probab=45.80 E-value=6e+02 Score=32.15 Aligned_cols=91 Identities=14% Similarity=0.099 Sum_probs=55.0
Q ss_pred cccceeeecCCcceEEEEEecce---------EEEEEEeCCCHHHHHHHHHHHh----CC------CCCCch--hhccce
Q 040705 341 GYDYSVFDLTRVDRVQIQIHGNS---------VQGRILHGNSPCELIEHFTETI----GR------PPELPD--WIVSGA 399 (850)
Q Consensus 341 ~~~~~~fdl~~~~~v~~~~~gg~---------ld~y~~~G~tp~dvi~~Yt~Lt----Gr------p~lpP~--Wa~~G~ 399 (850)
+..++...=+..+.+.+-++.|. --.|+-.|++|-++|++-.+.+ |. =.+|+. |- ||
T Consensus 149 G~FRa~Lqg~~~~~~~ic~ESg~~~V~~s~~~~~~yvh~g~nPy~li~~a~~~v~~hl~TF~~~eeK~~P~~vd~F--GW 226 (865)
T PLN02982 149 GSFRSALHPGEDGHVMICAESGSTKVKASSFNSIAYVHVSDNPYNLMKEAYSALRVHLNTFRLLEEKALPKIVDKF--GW 226 (865)
T ss_pred CceEEEecCCCCCCEEEEEecCCccccccccceEEEEecCCCHHHHHHHHHHHHHHHhcccchhhhccCccccccc--eE
Confidence 33334333344456666665443 2246667999999988743322 21 112322 31 43
Q ss_pred ee--eec--CCHHHHHHHHHHHHhCCCCceeEEecc-cc
Q 040705 400 VA--GMQ--GGTDAVRRVWDALRSYQVPVSAFWLQD-WV 433 (850)
Q Consensus 400 ~l--g~~--~s~~~V~~v~~~~r~~~IP~D~i~lDd-w~ 433 (850)
.. -++ -+.+-|.+=++.+.+.|+|-.-+.||| |.
T Consensus 227 CTWDAFY~~V~p~GV~~Gv~~l~~gG~pprfvIIDDGWQ 265 (865)
T PLN02982 227 CTWDAFYLTVDPVGVWHGVKEFAEGGVPPRFLIIDDGWQ 265 (865)
T ss_pred EeechhhcccCHHHHHHHHHHHhcCCCCccEEEEecchh
Confidence 21 122 367899999999999999999999995 75
No 82
>PF10694 DUF2500: Protein of unknown function (DUF2500); InterPro: IPR019635 This entry represents a group of proteins that is largely confined to the Gammaproteobacteria. The function is not known. ; PDB: 3RD4_D 2L0C_A 3Q6C_N.
Probab=40.89 E-value=65 Score=30.27 Aligned_cols=58 Identities=10% Similarity=0.198 Sum_probs=34.9
Q ss_pred cccccceEEEEEEeeeccccccccccccccccccccceeeeEEEEeeecCCceeEEEEEec
Q 040705 137 QNVQFPLVLITGWIFSKKIKKTNQSYVIYNKKDIQFETKAGYWLLFDQKTSHQIGFELKLG 197 (850)
Q Consensus 137 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (850)
.+.+.|.+.+.-++..|+...+... ..+.... +..+++|||.|+-.+.++..|.|+..
T Consensus 28 ~n~~aP~~sv~a~Vv~Kr~~~~~~~-~~~~~~~--~~~~~~YyvtFe~e~G~r~ef~V~~~ 85 (110)
T PF10694_consen 28 KNNNAPVRSVPATVVDKRTEVSTHR-RSRQREV--GSESTEYYVTFEFESGDRREFRVSGH 85 (110)
T ss_dssp ------EEEEEEEEEEEEEEEEEES-GG--SS---SS-EEEEEEEEEESSSSSEEEEE-HH
T ss_pred hcCCCCcEEEEEEEEEeEeEEeCCC-CCCCCcc--CCCceEEEEEEEECCCCEEEEEECHH
Confidence 5667789999999998875433221 1111112 44789999999999999999999664
No 83
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=39.95 E-value=2.2e+02 Score=33.58 Aligned_cols=148 Identities=18% Similarity=0.314 Sum_probs=80.0
Q ss_pred chhhccceee--ee-cCCHHHHHHHHHHHHhCCCCceeEEecc---ccccc-----ccccCceeeeeeee----------
Q 040705 392 PDWIVSGAVA--GM-QGGTDAVRRVWDALRSYQVPVSAFWLQD---WVGQR-----ETLIGSQLWWNWEV---------- 450 (850)
Q Consensus 392 P~Wa~~G~~l--g~-~~s~~~V~~v~~~~r~~~IP~D~i~lDd---w~~~~-----~~~~G~~~~~~ft~---------- 450 (850)
|++..+|+++ ++ ..+.+.|+++++.|...++-.=-++|.| |--+- -+..|... .++.
T Consensus 3 Prf~~RGlmLDvaR~f~~~~~ik~~Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r--~~~~~~~~~~~~~~ 80 (445)
T cd06569 3 PRFEYRGMHLDVARNFHSKETVLKLLDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKR--CHDLSETTCLLPQL 80 (445)
T ss_pred CCCcccceeeeccCCCCCHHHHHHHHHHHHHhCCceEEEEeecCCCcceeccCCchhhhccccc--cccccccccccccc
Confidence 7777778886 34 3589999999999999988777666643 31100 01122110 0000
Q ss_pred --c-------CCCCc--ChHHHHHHHHhcCceEEEecC-CccCCCCCCCCccchhhHHHHhCC-------cEEecCCC-C
Q 040705 451 --D-------TTRYK--GWKQLLKDLNAHHVKVMTYCN-PCLAPSHEKPNRRRNLFEEAKKLD-------ILVKDKNG-E 510 (850)
Q Consensus 451 --d-------~~~FP--dp~~mi~~Lh~~G~k~~~~i~-P~I~~~~~k~~~~~~~y~e~~~~g-------~fvk~~~G-~ 510 (850)
. ...|. +.+++++.-+++||.+|.=|| |+=...-.+. -...|.+..+.| +.+.++.. .
T Consensus 81 ~~~~~~~~~~~g~YT~~di~eiv~yA~~rgI~VIPEID~PGH~~a~l~a--~~~~yp~l~~~g~~~~~~~~~~~d~~~~~ 158 (445)
T cd06569 81 GSGPDTNNSGSGYYSRADYIEILKYAKARHIEVIPEIDMPGHARAAIKA--MEARYRKLMAAGKPAEAEEYRLSDPADTS 158 (445)
T ss_pred ccCcccCcccCCccCHHHHHHHHHHHHHcCCEEEEccCCchhHHHHHHh--hhccchhhhccCCccccccccccCccccc
Confidence 0 11222 678899999999999998664 2211000000 000122222211 22222211 1
Q ss_pred eeEecCCCCceEeccCCCHHHHHHHHHHHHHHHh
Q 040705 511 QYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVE 544 (850)
Q Consensus 511 ~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~ 544 (850)
.+. .........+|.+||++.+...++++++.+
T Consensus 159 ~~~-~~~~~~~~~L~p~~~~ty~fl~~vl~Ev~~ 191 (445)
T cd06569 159 QYL-SVQFYTDNVINPCMPSTYRFVDKVIDEIAR 191 (445)
T ss_pred ccc-cccccccccccCCchhHHHHHHHHHHHHHH
Confidence 111 111112357999999999999999888764
No 84
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B ....
Probab=38.23 E-value=68 Score=36.30 Aligned_cols=26 Identities=15% Similarity=0.132 Sum_probs=16.8
Q ss_pred ecCCCCcChHHHHHHHHhcCceEEEec
Q 040705 450 VDTTRYKGWKQLLKDLNAHHVKVMTYC 476 (850)
Q Consensus 450 ~d~~~FPdp~~mi~~Lh~~G~k~~~~i 476 (850)
|+++.| |+++.++..++.|.|+++.+
T Consensus 86 F~p~~f-D~dqW~~~ak~aGakY~VlT 111 (346)
T PF01120_consen 86 FNPTKF-DADQWAKLAKDAGAKYVVLT 111 (346)
T ss_dssp ---TT---HHHHHHHHHHTT-SEEEEE
T ss_pred CCcccC-CHHHHHHHHHHcCCCEEEee
Confidence 455555 78899999999999988875
No 85
>smart00642 Aamy Alpha-amylase domain.
Probab=34.21 E-value=1.2e+02 Score=30.55 Aligned_cols=70 Identities=20% Similarity=0.381 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHHHhCCCCceeEEec-ccccccc--cccCceeeeee-eecCCCCc---ChHHHHHHHHhcCceEEEecCC
Q 040705 406 GTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRE--TLIGSQLWWNW-EVDTTRYK---GWKQLLKDLNAHHVKVMTYCNP 478 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~--~~~G~~~~~~f-t~d~~~FP---dp~~mi~~Lh~~G~k~~~~i~P 478 (850)
+-+.+.+-++.+++.| ++++||- -+..... ...|+.. -+| ..++ +|- +.++|++++|++|+++++=+-|
T Consensus 17 ~~~gi~~~l~yl~~lG--~~~I~l~Pi~~~~~~~~~~~gY~~-~d~~~i~~-~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 17 DLQGIIEKLDYLKDLG--VTAIWLSPIFESPQGYPSYHGYDI-SDYKQIDP-RFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred CHHHHHHHHHHHHHCC--CCEEEECcceeCCCCCCCCCCcCc-cccCCCCc-ccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4566666666677755 7888886 2211100 1112110 022 2222 343 5688999999999999997655
Q ss_pred c
Q 040705 479 C 479 (850)
Q Consensus 479 ~ 479 (850)
.
T Consensus 93 N 93 (166)
T smart00642 93 N 93 (166)
T ss_pred C
Confidence 4
No 86
>smart00812 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
Probab=32.73 E-value=1e+02 Score=35.49 Aligned_cols=27 Identities=4% Similarity=0.079 Sum_probs=22.8
Q ss_pred eecCCCCcChHHHHHHHHhcCceEEEec
Q 040705 449 EVDTTRYKGWKQLLKDLNAHHVKVMTYC 476 (850)
Q Consensus 449 t~d~~~FPdp~~mi~~Lh~~G~k~~~~i 476 (850)
.|++++| |+++.++.+++.|.|+++.+
T Consensus 75 ~F~p~~f-D~~~Wa~~~k~AGakY~vlT 101 (384)
T smart00812 75 QFTAEKF-DPEEWADLFKKAGAKYVVLT 101 (384)
T ss_pred cCCchhC-CHHHHHHHHHHcCCCeEEee
Confidence 3467666 89999999999999999875
No 87
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=31.59 E-value=4.3e+02 Score=32.92 Aligned_cols=121 Identities=10% Similarity=0.115 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHhCCCCceeEEecccccccccccCceeeeeeeecCCCCcC---------hHHHH-HHHHhcCceEEEec
Q 040705 407 TDAVRRVWDALRSYQVPVSAFWLQDWVGQRETLIGSQLWWNWEVDTTRYKG---------WKQLL-KDLNAHHVKVMTYC 476 (850)
Q Consensus 407 ~~~V~~v~~~~r~~~IP~D~i~lDdw~~~~~~~~G~~~~~~ft~d~~~FPd---------p~~mi-~~Lh~~G~k~~~~i 476 (850)
.+++.++++++++.||- +++++-..+.. ..| .++...||+ ...+. +--|+.|+||-.|+
T Consensus 333 ~~~L~~lLdrlk~~G~n--tV~lqafadp~--gd~-------~~~s~yfP~~~lp~r~d~f~~~aw~l~~r~~v~v~AWm 401 (671)
T PRK14582 333 DRNIDVLIQRVKDMQIS--TVYLQAFADPD--GDG-------LVKELYFPNRLLPMRADLFNRVAWQLRTRAGVNVYAWM 401 (671)
T ss_pred HHHHHHHHHHHHHcCCC--EEEEEeccCCC--CCc-------cccccccCccccccccCCcCHHHHHHHHhhCCEEEEec
Confidence 46888899999998865 45565332211 111 223444442 11111 12457799999999
Q ss_pred CCccCCCCCCCCccchhhHHHHhCCcEEecCCCCe-eEecCCCCceEeccCCCHHHHHHHHHHHHHHHh-cCccEEEec
Q 040705 477 NPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQ-YLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVE-DGVRGWMAD 553 (850)
Q Consensus 477 ~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~-y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~-~Gvdg~w~D 553 (850)
.|+--... .+.+.-++ . +.++.+ -+.+.|.. -+|.++|++|+|.++.+.++.. ..|||+-.|
T Consensus 402 p~~~~~~~----~~~~~~~~---~-----~~~~~~~~~~~~~~~---rl~P~~pe~r~~i~~i~~dla~~~~~dGilf~ 465 (671)
T PRK14582 402 PVLSFDLD----PTLPRVKR---L-----DTGEGKAQIHPEQYR---RLSPFDDRVRAQVGMLYEDLAGHAAFDGILFH 465 (671)
T ss_pred cceeeccC----CCcchhhh---c-----cccCCccccCCCCCc---CCCCCCHHHHHHHHHHHHHHHHhCCCceEEec
Confidence 99832111 11111111 1 111111 12333422 2999999999999999999987 479987765
No 88
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
Probab=30.76 E-value=68 Score=35.89 Aligned_cols=53 Identities=15% Similarity=0.132 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhCCCCceeEEecccccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceEEEe
Q 040705 407 TDAVRRVWDALRSYQVPVSAFWLQDWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTY 475 (850)
Q Consensus 407 ~~~V~~v~~~~r~~~IP~D~i~lDdw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~ 475 (850)
.+.+.++++.++++|+|+|+|-++..+.. +.. ..+...+++++.+.|+.+.+-
T Consensus 187 ~~~~~~lv~~l~~~gvpIdgIG~Q~H~~~---------------~~~-~~~i~~~l~~~~~~Gl~i~IT 239 (320)
T PF00331_consen 187 RDAYLNLVKDLKARGVPIDGIGLQSHFDA---------------GYP-PEQIWNALDRFASLGLPIHIT 239 (320)
T ss_dssp HHHHHHHHHHHHHTTHCS-EEEEEEEEET---------------TSS-HHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHHHhCCCccceechhhccCC---------------CCC-HHHHHHHHHHHHHcCCceEEE
Confidence 36789999999999999999998854321 111 235678889999999877664
No 89
>PRK15447 putative protease; Provisional
Probab=30.68 E-value=2.7e+02 Score=30.81 Aligned_cols=118 Identities=15% Similarity=0.194 Sum_probs=65.7
Q ss_pred CHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceEEEecCCccCCCC
Q 040705 406 GTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPSH 484 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~~~ 484 (850)
-...++.+...+.+.| +|++++. ...+. |. +|+ ..+.++.++.+|+.|.|+.+.+ |.|...
T Consensus 13 p~~~~~~~~~~~~~~g--aDaVY~g~~~~~~-------R~--~f~-----~~~l~e~v~~~~~~gkkvyva~-p~i~~~- 74 (301)
T PRK15447 13 PKETVRDFYQRAADSP--VDIVYLGETVCSK-------RR--ELK-----VGDWLELAERLAAAGKEVVLST-LALVEA- 74 (301)
T ss_pred CCCCHHHHHHHHHcCC--CCEEEECCccCCC-------cc--CCC-----HHHHHHHHHHHHHcCCEEEEEe-cccccC-
Confidence 3455667777777776 9999997 33332 21 332 2478999999999999988865 444210
Q ss_pred CCCCccchhhHHHHhCCc---EEecCCCCeeEec--CCCC-ceEeccCCCHHHHHHHHHHHHHHHhcCccEEEe
Q 040705 485 EKPNRRRNLFEEAKKLDI---LVKDKNGEQYLVP--NTAF-DVGMLDLTHPDTASWFKQVLQEMVEDGVRGWMA 552 (850)
Q Consensus 485 ~k~~~~~~~y~e~~~~g~---fvk~~~G~~y~~~--~w~g-~~~~~DftnP~a~~Ww~~~l~~l~~~Gvdg~w~ 552 (850)
+...+.+.+..+.+. .|.|. |...... ..+. ....+.-+|..+.++|.+ .|++.+.+
T Consensus 75 ---~~e~~~l~~~l~~~~~~v~v~d~-g~l~~~~e~~~~l~~d~~lni~N~~a~~~l~~-------~G~~rv~l 137 (301)
T PRK15447 75 ---PSELKELRRLVENGEFLVEANDL-GAVRLLAERGLPFVAGPALNCYNAATLALLAR-------LGATRWCM 137 (301)
T ss_pred ---HHHHHHHHHHHhcCCCEEEEeCH-HHHHHHHhcCCCEEEecccccCCHHHHHHHHH-------cCCcEEEE
Confidence 122334444444432 22221 1100000 1111 123455689999998866 47776653
No 90
>PF07611 DUF1574: Protein of unknown function (DUF1574); InterPro: IPR011468 This is a family of hypothetical proteins found in Leptospira interrogans and other bacteria.
Probab=29.36 E-value=96 Score=35.22 Aligned_cols=35 Identities=14% Similarity=0.230 Sum_probs=30.3
Q ss_pred eeeeeecCCCCcChHHHHHHHHhcCceEEEecCCcc
Q 040705 445 WWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCL 480 (850)
Q Consensus 445 ~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I 480 (850)
..+|+.++..+.-.+++++.+++.|+++++|. |-|
T Consensus 241 l~~f~~s~~q~~F~e~~L~~ake~~I~~vl~~-P~V 275 (345)
T PF07611_consen 241 LSSFTFSETQFFFLEKFLKLAKENGIPVVLWW-PKV 275 (345)
T ss_pred hcCCCCChhHHHHHHHHHHHHHHcCCcEEEEE-ecc
Confidence 34788899999889999999999999999875 666
No 91
>PF13653 GDPD_2: Glycerophosphoryl diester phosphodiesterase family; PDB: 3RLG_A 2F9R_B 1XX1_A 3RLH_A.
Probab=28.27 E-value=54 Score=23.77 Aligned_cols=17 Identities=35% Similarity=0.704 Sum_probs=12.5
Q ss_pred HHHHHHhcCccEEEecC
Q 040705 538 VLQEMVEDGVRGWMADF 554 (850)
Q Consensus 538 ~l~~l~~~Gvdg~w~D~ 554 (850)
..+.+++.||||+++|.
T Consensus 12 ~~~~~l~~GVDgI~Td~ 28 (30)
T PF13653_consen 12 SWRELLDLGVDGIMTDY 28 (30)
T ss_dssp HHHHHHHHT-SEEEES-
T ss_pred HHHHHHHcCCCEeeCCC
Confidence 34778889999999884
No 92
>PF07555 NAGidase: beta-N-acetylglucosaminidase ; InterPro: IPR011496 This family consists of both eukaryotic and prokaryotic hyaluronidases. Human Q9HAR0 from SWISSPROT is expressed during meningioma []. Clostridium perfringens, P26831 from SWISSPROT, is involved in pathogenesis and is likely to act on connectivity tissue during gas gangrene []. It catalyses the random hydrolysis of 1->4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate.; PDB: 2WB5_B 2V5C_B 2VUR_A 2V5D_A 2YDS_A 2CBI_A 2XPK_A 2CBJ_B 2J62_A 2X0Y_A ....
Probab=27.23 E-value=9.2e+02 Score=27.00 Aligned_cols=153 Identities=16% Similarity=0.250 Sum_probs=75.2
Q ss_pred ceeeeecC---CHHHHHHHHHHHHhCCCCceeEEe-cc-cccccccccCceeeeeeeecCCCCc-----ChHHHHHHHHh
Q 040705 398 GAVAGMQG---GTDAVRRVWDALRSYQVPVSAFWL-QD-WVGQRETLIGSQLWWNWEVDTTRYK-----GWKQLLKDLNA 467 (850)
Q Consensus 398 G~~lg~~~---s~~~V~~v~~~~r~~~IP~D~i~l-Dd-w~~~~~~~~G~~~~~~ft~d~~~FP-----dp~~mi~~Lh~ 467 (850)
|++=|++| |.++=+++++-+.++++-.=..-= || ++.. .| ++.|| ..+++++.-++
T Consensus 2 GvIEGFYG~PWs~e~R~~l~~f~~~~kmN~YiYAPKdDpyhr~-----------~W---re~Yp~~el~~l~~L~~~a~~ 67 (306)
T PF07555_consen 2 GVIEGFYGRPWSHEDRLDLIRFLGRYKMNTYIYAPKDDPYHRS-----------KW---REPYPEEELAELKELADAAKA 67 (306)
T ss_dssp EEEE-SSSS---HHHHHHHHHHHHHTT--EEEE--TT-TTTTT-----------TT---TS---HHHHHHHHHHHHHHHH
T ss_pred CceeCcCCCCCCHHHHHHHHHHHHHcCCceEEECCCCChHHHh-----------hh---cccCCHHHHHHHHHHHHHHHH
Confidence 55556665 667777888888888876322111 12 2211 12 34566 45778888889
Q ss_pred cCceEEEecCCccCCCCCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHHhcCc
Q 040705 468 HHVKVMTYCNPCLAPSHEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVEDGV 547 (850)
Q Consensus 468 ~G~k~~~~i~P~I~~~~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~~Gv 547 (850)
.|++++.-+.|+... .|+.++..+=....++++.+.||
T Consensus 68 ~~V~Fv~aisPg~~~------------------------------------------~~s~~~d~~~L~~K~~ql~~lGv 105 (306)
T PF07555_consen 68 NGVDFVYAISPGLDI------------------------------------------CYSSEEDFEALKAKFDQLYDLGV 105 (306)
T ss_dssp TT-EEEEEEBGTTT--------------------------------------------TSHHHHHHHHHHHHHHHHCTT-
T ss_pred cCCEEEEEECccccc------------------------------------------ccCcHHHHHHHHHHHHHHHhcCC
Confidence 999999999999741 12334445555667788889999
Q ss_pred cEEEecCCCCCCCcceecCCCCcCcccCchhHHHHHHHHHHHHHHhhcccCccccCCCCceEEEEecccCC
Q 040705 548 RGWMADFGEGLPVDAILYSGEDPISAHNRYPELWAQINREFVEEWKDKCTGTKREDTEEDLVFFMRAGFRD 618 (850)
Q Consensus 548 dg~w~D~gE~~p~d~~~~~G~~~~~~HN~Y~~l~aka~~e~~~~~~~~~~~~~~~~~~~rpfilsRSg~aG 618 (850)
..|=+-|-. ++.+....+. +.-+..+...++..-+..+++.+. .....++++.-+.|.+
T Consensus 106 r~FailfDD-i~~~~~~~~~----~~~~~~~~~q~~l~n~v~~~l~~~-------~~~~~~l~~cPt~Y~~ 164 (306)
T PF07555_consen 106 RSFAILFDD-IDGDLWHCDK----DDFNSLAQAQARLLNRVNKELIKK-------KGDVKPLIFCPTEYCG 164 (306)
T ss_dssp -EEEEE-TS--SSC--TTTT----TT-SCHHHHHHHHHHHHHHHTTTC-------SSSS--EEEE-SS-SC
T ss_pred CEEEEeecC-CCCccccccc----cccchHHHHHHHHHHHHHHHHhcc-------CCCCCCceEEChhhcC
Confidence 876532211 1111001111 111344555555555544554321 1234578888877766
No 93
>smart00633 Glyco_10 Glycosyl hydrolase family 10.
Probab=26.01 E-value=1.1e+02 Score=32.99 Aligned_cols=54 Identities=13% Similarity=0.230 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHhCCCCceeEEecccccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceEEEe
Q 040705 407 TDAVRRVWDALRSYQVPVSAFWLQDWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTY 475 (850)
Q Consensus 407 ~~~V~~v~~~~r~~~IP~D~i~lDdw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~ 475 (850)
.+.+.++++.++++|+|+|+|-++-.. ..+...-.+..+.+++|.+.|..+.+-
T Consensus 135 ~~~~~~~v~~l~~~g~~iDgiGlQ~H~---------------~~~~~~~~~~~~~l~~~~~~g~pi~iT 188 (254)
T smart00633 135 RQAIYELVKKLKAKGVPIDGIGLQSHL---------------SLGSPNIAEIRAALDRFASLGLEIQIT 188 (254)
T ss_pred HHHHHHHHHHHHHCCCccceeeeeeee---------------cCCCCCHHHHHHHHHHHHHcCCceEEE
Confidence 357789999999999999999887211 101101123567777777788777653
No 94
>TIGR03471 HpnJ hopanoid biosynthesis associated radical SAM protein HpnJ. One of the well-described hopanoid intermediates is bacteriohopanetetrol. In the conversion from hopene several reactions must occur in the side chain for which a radical mechanism might be reasonable. These include the four (presumably anaerobic) hydroxylations and a methyl shift.
Probab=24.95 E-value=3.1e+02 Score=32.21 Aligned_cols=109 Identities=8% Similarity=0.110 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHHhCCCCceeEEecccccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceEEE--ecCCccCCC
Q 040705 406 GTDAVRRVWDALRSYQVPVSAFWLQDWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMT--YCNPCLAPS 483 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~IP~D~i~lDdw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~--~i~P~I~~~ 483 (850)
+.+++.+.++.++++||.+.+.+|= -+..+...+.++.++.+.+.+...+. .+.|+
T Consensus 321 ~~~~~~~~i~~~~~~Gi~v~~~~Ii------------------GlPget~e~~~~ti~~~~~l~~~~~~~~~l~P~---- 378 (472)
T TIGR03471 321 TVEIARRFTRDCHKLGIKVHGTFIL------------------GLPGETRETIRKTIDFAKELNPHTIQVSLAAPY---- 378 (472)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEEEE------------------eCCCCCHHHHHHHHHHHHhcCCCceeeeecccC----
Confidence 4567888899999999987764442 11223344667778888877754332 22333
Q ss_pred CCCCCccchhhHHHHhCCcEEecCCCCeeEecCCCCceE--eccCCCHHHHHHHHHHHHHHH
Q 040705 484 HEKPNRRRNLFEEAKKLDILVKDKNGEQYLVPNTAFDVG--MLDLTHPDTASWFKQVLQEMV 543 (850)
Q Consensus 484 ~~k~~~~~~~y~e~~~~g~fvk~~~G~~y~~~~w~g~~~--~~DftnP~a~~Ww~~~l~~l~ 543 (850)
.+.++|++++++|++..+.. +.+-...+. ... ..+++..+..+++...++.++
T Consensus 379 -----PGT~l~~~~~~~g~~~~~~~-~~~~~~~~~-~~~~~~~~~s~~el~~~~~~~~~~~~ 433 (472)
T TIGR03471 379 -----PGTELYDQAKQNGWITQDSA-AMVDDTGHQ-MAAISYPHLSREEIFDGVERFYKRFY 433 (472)
T ss_pred -----CCcHHHHHHHHCCCcCCchh-hcccCCCce-eeeecCCCCCHHHHHHHHHHHHHHHc
Confidence 35789999999998764321 111000010 011 257777777887777666544
No 95
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=24.88 E-value=1.3e+02 Score=33.58 Aligned_cols=67 Identities=9% Similarity=0.196 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHHHhCCCCceeEEec-ccccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceEEEecCCccCC
Q 040705 406 GTDAVRRVWDALRSYQVPVSAFWLQ-DWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAP 482 (850)
Q Consensus 406 s~~~V~~v~~~~r~~~IP~D~i~lD-dw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~ 482 (850)
..+..+++++++|+.|+-+=..++- .++...+ |. +||+ -.-|...+++..++.|++|++..-|+|+.
T Consensus 22 p~~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~---g~---~df~----g~~dl~~f~~~a~~~gl~vilrpGpyi~a 89 (319)
T PF01301_consen 22 PPEYWRDRLQKMKAAGLNTVSTYVPWNLHEPEE---GQ---FDFT----GNRDLDRFLDLAQENGLYVILRPGPYICA 89 (319)
T ss_dssp -GGGHHHHHHHHHHTT-SEEEEE--HHHHSSBT---TB------S----GGG-HHHHHHHHHHTT-EEEEEEES---T
T ss_pred ChhHHHHHHHHHHhCCcceEEEeccccccCCCC---Cc---cccc----chhhHHHHHHHHHHcCcEEEecccceecc
Confidence 3667789999999999999888876 5554433 31 2443 23589999999999999999999999964
No 96
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type. Trehalose synthase catalyzes a one-step conversion of maltose to trehalose. This is an alternative to the OtsAB and TreYZ pathways. This family includes a characterized example from Pseudomonas stutzeri plus very closely related sequences from other Pseudomonads. Cutoff scores are set to find a more distantly related sequence from Desulfovibrio vulgaris, likely to be functionally equivalent, between trusted and noise limits.
Probab=22.63 E-value=3e+02 Score=33.96 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=26.0
Q ss_pred ccCCCHH--HHHHHH-HHHHHHHhcCccEEEecC
Q 040705 524 LDLTHPD--TASWFK-QVLQEMVEDGVRGWMADF 554 (850)
Q Consensus 524 ~DftnP~--a~~Ww~-~~l~~l~~~Gvdg~w~D~ 554 (850)
++|.||. +++-.. +.++.+.+.|++||-+|.
T Consensus 262 LNw~dPs~av~~~~~gdal~~w~~lG~~GfRLDA 295 (688)
T TIGR02455 262 LNWLDPTFAAQQLIIGDALHAIDCLGARGLRLDA 295 (688)
T ss_pred cCccCccHHHHHHHHHHHHHHHHHhccccceecc
Confidence 5677998 887777 688888899999999995
No 97
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A ....
Probab=22.15 E-value=2.4e+02 Score=32.71 Aligned_cols=100 Identities=23% Similarity=0.352 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHhCCCCceeEEecccccccccccCceeeeeeeecCCCCcChHHHHHHHHhcCceEEEecCCccCCC----
Q 040705 408 DAVRRVWDALRSYQVPVSAFWLQDWVGQRETLIGSQLWWNWEVDTTRYKGWKQLLKDLNAHHVKVMTYCNPCLAPS---- 483 (850)
Q Consensus 408 ~~V~~v~~~~r~~~IP~D~i~lDdw~~~~~~~~G~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~~~~i~P~I~~~---- 483 (850)
+.++.-++.+++.| +|++-+|-|++.-+.. |.+ .|. |..-+++.+-+++.|+|+.+++.=+=+..
T Consensus 16 ~~~~~~L~~LK~~G--V~GVmvdvWWGiVE~~-~p~---~yd-----Ws~Y~~l~~~vr~~GLk~~~vmsfH~cGgNvgD 84 (402)
T PF01373_consen 16 NALEAQLRALKSAG--VDGVMVDVWWGIVEGE-GPQ---QYD-----WSGYRELFEMVRDAGLKLQVVMSFHQCGGNVGD 84 (402)
T ss_dssp HHHHHHHHHHHHTT--EEEEEEEEEHHHHTGS-STT---B--------HHHHHHHHHHHHTT-EEEEEEE-S-BSSSTTS
T ss_pred HHHHHHHHHHHHcC--CcEEEEEeEeeeeccC-CCC---ccC-----cHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCC
Confidence 46677777888766 8999999888654421 211 122 22457888999999999998763221100
Q ss_pred CCCCCccchhhHHHHhCCcEEecCCCCe---eEecCCC
Q 040705 484 HEKPNRRRNLFEEAKKLDILVKDKNGEQ---YLVPNTA 518 (850)
Q Consensus 484 ~~k~~~~~~~y~e~~~~g~fvk~~~G~~---y~~~~w~ 518 (850)
+-...--.-+.+.+.+.++|.++..|.. |+.++..
T Consensus 85 ~~~IpLP~Wv~~~~~~~di~ytd~~G~rn~E~lSp~~~ 122 (402)
T PF01373_consen 85 DCNIPLPSWVWEIGKKDDIFYTDRSGNRNKEYLSPVLD 122 (402)
T ss_dssp SSEB-S-HHHHHHHHHSGGEEE-TTS-EEEEEE-CTBT
T ss_pred ccCCcCCHHHHhccccCCcEEECCCCCcCcceeecccC
Confidence 0000011235677778899999999864 4444433
No 98
>PF03537 Glyco_hydro_114: Glycoside-hydrolase family GH114; InterPro: IPR004352 Eighty-one archaeal-like genes, ranging in size from 4-20kb, are clustered in 15 regions of the Thermotoga maritima genome []. Conservation of gene order between T. maritima and Archaea in many of these regions suggests that lateral gene transfer may have occurred between thermophilic Eubacteria and Archaea []. One of the T. maritima sequences (hypothetical protein TM1410) shares similarity with Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1477 and with hypothetical protein DR0705 from Deinococcus radiodurans. The sequences are characterised by relatively variable N- and C-terminal domains, and a more conserved central domain. They share no similarity with any other known, functionally or structurally characterised proteins. ; PDB: 2AAM_F.
Probab=20.23 E-value=92 Score=27.15 Aligned_cols=23 Identities=26% Similarity=0.189 Sum_probs=17.7
Q ss_pred ChHHHHHHHHhcCceEEEecCCc
Q 040705 457 GWKQLLKDLNAHHVKVMTYCNPC 479 (850)
Q Consensus 457 dp~~mi~~Lh~~G~k~~~~i~P~ 479 (850)
.+++.|+.||++|.+++.+++-+
T Consensus 37 ~~~~~I~~L~~~G~~vicY~s~G 59 (74)
T PF03537_consen 37 FSKEEIARLKAQGKKVICYFSIG 59 (74)
T ss_dssp --HHHHHHHHHTT-EEEEEEESS
T ss_pred CCHHHHHHHHHCCCEEEEEEeCc
Confidence 45889999999999999988655
No 99
>PF11308 GHL1-3: Glycosyl hydrolases related to GH101 family, GHL1-GHL3; InterPro: IPR021459 Some members in this family of proteins with unknown function are annotated as lipoproteins however this cannot be confirmed. Currently no function is known.
Probab=20.03 E-value=1.1e+02 Score=34.22 Aligned_cols=57 Identities=16% Similarity=0.210 Sum_probs=33.9
Q ss_pred HHhCCcEEecCCCCeeEecCCCCceEeccCCCHHHHHHHHHHHHHHHh-cCccEEEecC
Q 040705 497 AKKLDILVKDKNGEQYLVPNTAFDVGMLDLTHPDTASWFKQVLQEMVE-DGVRGWMADF 554 (850)
Q Consensus 497 ~~~~g~fvk~~~G~~y~~~~w~g~~~~~DftnP~a~~Ww~~~l~~l~~-~Gvdg~w~D~ 554 (850)
......-|.++||+...+-.|.+ +..+..+-.-++..+++.+.++++ .|++|+-+|.
T Consensus 70 ~~~~~~~v~~~dGt~~~gf~w~~-g~~~~~~p~~~~~~v~~r~~~i~~~~~~ns~FlDv 127 (307)
T PF11308_consen 70 GLYEDAAVRNADGTKKEGFRWGG-GRYLNVCPTCALPYVKRRVEEILKGIGFNSWFLDV 127 (307)
T ss_pred cccccceeecCCCCCccceecCC-cceeccCcccccHHHHHHHHHHHHhCCCCeEEEec
Confidence 34456678899999876654543 222221112234455556666655 7899998884
Done!