BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040712
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S7M9|P24B2_ARATH Transmembrane emp24 domain-containing protein p24beta2
OS=Arabidopsis thaliana GN=At3g07680 PE=1 SV=1
Length = 208
Score = 246 bits (629), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 147/176 (83%)
Query: 4 SHNVECEGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRRSTATFEFVAYK 63
SH E EGDTLH SFVV+K+D+ WH++++GV+L + GP+ E++ DF + +A +FV K
Sbjct: 33 SHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLVIHGPTGEQIHDFREQISAKHDFVVQK 92
Query: 64 KGLYKFCFTNKSPYHETPDFDIHVAHYAYHDQHAKDEHINPILDQIAKLEEALYDIHFQQ 123
KG+Y+FCFTNKSPYHET DFD+ + H+AY+DQHAKDEH P+++QI+KLEEALY+I F+Q
Sbjct: 93 KGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQHAKDEHFTPLMEQISKLEEALYNIQFEQ 152
Query: 124 HWFDAQTERQSIVNKTMSRRAIYKAMLGSFFLITASFLQIHLLKRLFDRKQGLSRV 179
HW +AQT+RQ+IVN+ MS+RA++KA+ SF LI ASFLQ++LL+RLF+RK G+SRV
Sbjct: 153 HWLEAQTDRQAIVNENMSKRAVHKALFESFALIGASFLQVYLLRRLFERKLGMSRV 208
>sp|Q9LIL4|P24B3_ARATH Transmembrane emp24 domain-containing protein p24beta3
OS=Arabidopsis thaliana GN=At3g22845 PE=2 SV=1
Length = 214
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 91/170 (53%)
Query: 10 EGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKF 69
EGDT+ +FVVV D W G++ TVT P+ V+ S FEF A K G+YKF
Sbjct: 45 EGDTVSGNFVVVDHDIFWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKF 104
Query: 70 CFTNKSPYHETPDFDIHVAHYAYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQ 129
CF N ET F IHV H AKDEH++P+ +IA+L EAL + +Q + A+
Sbjct: 105 CFHNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKAR 164
Query: 130 TERQSIVNKTMSRRAIYKAMLGSFFLITASFLQIHLLKRLFDRKQGLSRV 179
R N++ +R I+ + FL AS LQ+ +++LF + +RV
Sbjct: 165 DTRHRHTNESTRKRVIFYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214
>sp|Q9R0Q3|TMED2_MOUSE Transmembrane emp24 domain-containing protein 2 OS=Mus musculus
GN=Tmed2 PE=1 SV=1
Length = 201
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 34 VELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYHETPD---FDIHVAHY 90
+++ +TGP ++ + DR S+ + F A+ G YKFCF+N+ TP F I +
Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTM-TPKIVMFTIDIGEA 115
Query: 91 AYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAML 150
+ H N + + I +L A+ + +Q + + + +N + R + +
Sbjct: 116 PKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFF 175
Query: 151 GSFFLITASFLQIHLLKRLFDRKQ 174
+ L+ + QI+ LKR F+ ++
Sbjct: 176 EALVLVAMTLGQIYYLKRFFEVRR 199
>sp|P49020|TMED2_CRIGR Transmembrane emp24 domain-containing protein 2 (Fragment)
OS=Cricetulus griseus GN=TMED2 PE=1 SV=1
Length = 196
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 34 VELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYHETPD---FDIHVAHY 90
+++ +TGP ++ + DR S+ + F A+ G YKFCF+N+ TP F I +
Sbjct: 52 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTM-TPKIVMFTIDIGEA 110
Query: 91 AYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAML 150
+ H N + + I +L A+ + +Q + + + +N + R + +
Sbjct: 111 PKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFF 170
Query: 151 GSFFLITASFLQIHLLKRLFDRKQ 174
+ L+ + QI+ LKR F+ ++
Sbjct: 171 EALVLVAMTLGQIYYLKRFFEVRR 194
>sp|Q63524|TMED2_RAT Transmembrane emp24 domain-containing protein 2 OS=Rattus
norvegicus GN=Tmed2 PE=1 SV=1
Length = 201
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 34 VELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYHETPD---FDIHVAHY 90
+++ +TGP ++ + DR S+ + F A+ G YKFCF+N+ TP F I +
Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTM-TPKIVMFTIDIGEA 115
Query: 91 AYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAML 150
+ H N + + I +L A+ + +Q + + + +N + R + +
Sbjct: 116 PKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFF 175
Query: 151 GSFFLITASFLQIHLLKRLFDRKQ 174
+ L+ + QI+ LKR F+ ++
Sbjct: 176 EALVLVAMTLGQIYYLKRFFEVRR 199
>sp|Q15363|TMED2_HUMAN Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens
GN=TMED2 PE=1 SV=1
Length = 201
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 34 VELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYHETPD---FDIHVAHY 90
+++ +TGP ++ + DR S+ + F A+ G YKFCF+N+ TP F I +
Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTM-TPKIVMFTIDIGEA 115
Query: 91 AYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAML 150
+ H N + + I +L A+ + +Q + + + +N + R + +
Sbjct: 116 PKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFF 175
Query: 151 GSFFLITASFLQIHLLKRLFDRKQ 174
+ L+ + QI+ LKR F+ ++
Sbjct: 176 EALVLVAMTLGQIYYLKRFFEVRR 199
>sp|Q769F9|TMEDA_DICDI Transmembrane emp24 domain-containing protein A OS=Dictyostelium
discoideum GN=empA PE=3 SV=1
Length = 205
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 34 VELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNK--SPYHETPDFDIHVAHYA 91
++ T+ P V R S T + G+Y FCF+NK S +T F + V +
Sbjct: 61 IDFTIISPDKRIVYSGQRESEGTKTLRSSFAGVYSFCFSNKMSSLTDKTVSFILSVGESS 120
Query: 92 YHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAMLG 151
+ AK + + PI I L + + + +Q++F + ++ + R ++ ++
Sbjct: 121 PIREIAKKKDLTPIERSIMTLSDGVIAVKNEQNYFKMREAAHRNTAESTNSRVLWWSVFE 180
Query: 152 SFFLITASFLQIHLLKRLFDRKQGL 176
+F LI S QI+ L+R F+ K+ +
Sbjct: 181 AFVLIALSIWQIYYLRRFFEVKRAV 205
>sp|O17528|TMED2_CAEEL Suppressor/enhancer of lin-12 protein 9 OS=Caenorhabditis elegans
GN=sel-9 PE=1 SV=1
Length = 203
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 34 VELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYHETPDFDIHVAHYAYH 93
+++ +TGP ++ + +R S+ F F A+ G+Y +CF NK TP +
Sbjct: 55 IDVKITGPDNKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMSTM-TPKAVMFTVEITEP 113
Query: 94 DQHAKDEHINPILDQIAKLEE-------ALYDIHFQQHWFDAQTERQSIVNKTMSRRAIY 146
Q A N AKLEE AL + +Q + + + +N+ + R +
Sbjct: 114 HQQAPGAAANQDAADNAKLEEMVRELSSALMSVKHEQEYMEVRERVHRNINENTNSRVVM 173
Query: 147 KAMLGSFFLITASFLQIHLLKRLFD 171
A +F L+ + QI LKR F+
Sbjct: 174 WAAFEAFVLVGMTVGQIFYLKRFFE 198
>sp|A7SXK3|TMED_NEMVE Transmembrane emp24 domain-containing protein OS=Nematostella
vectensis GN=v1g194562 PE=3 SV=1
Length = 203
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/144 (18%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 34 VELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYHETP---DFDIHVAHY 90
+++ + GP + + +R ++ + F A+ G Y +CF+NK TP F + +
Sbjct: 59 IDVKIIGPDQKVIYSGERETSGKYTFAAHMDGTYNYCFSNKMSTM-TPKVLKFSMDIGEA 117
Query: 91 AYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAML 150
+ + + + +++L EA+ + +Q + + + +N + R ++ +
Sbjct: 118 PKDTSKEDNAGHDKLSEMVSQLSEAMTGVKHEQEYMEVRERIHRSINDNTNSRVVWWSFF 177
Query: 151 GSFFLITASFLQIHLLKRLFDRKQ 174
S L+ + Q++ LKR F+ ++
Sbjct: 178 ESLVLVAMTLGQVYYLKRFFEVRR 201
>sp|Q9P7I9|EMP24_SCHPO Endosomal protein P24B OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=emp24 PE=3 SV=1
Length = 199
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 30 SDEGVELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYHETPDFDIHVAH 89
D+ V +++ P+ + + S A + F G Y +CF N + E+ + +V
Sbjct: 54 GDQLVSMSIYNPAGQIMHQEVPNSMAQYSFTVKNPGKYMYCFYNDALDGESKEVLFNVHG 113
Query: 90 YAYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAM 149
Y D + NP+L ++ +L + + + +Q +F A+ ++ + R + ++
Sbjct: 114 VIYISDEDLDAN-NPLLGKVRQLHDTISKVKHEQEYFVARERIHRNTAESTNDRVKWWSI 172
Query: 150 LGSFFLITASFLQIHLLKRLFDRKQ 174
L + L++ QI LKRLF+ K+
Sbjct: 173 LQTVILVSVCVFQIFYLKRLFEVKR 197
>sp|Q9FVU0|P24D4_ARATH Transmembrane emp24 domain-containing protein p24delta4
OS=Arabidopsis thaliana GN=At1g57620 PE=1 SV=1
Length = 212
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 34 VELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYHETPDFDIHV-----A 88
V + VT P + + + F F + G Y CF + H DF I++
Sbjct: 65 VSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKSHGNKDFSINIDWKTGI 124
Query: 89 HYAYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWF-DAQTERQSIVNKTMSRRAIYK 147
D A+ E I + + KLE A+ IH + + + E + + KT SR A Y
Sbjct: 125 AAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSRVAWYS 184
Query: 148 AM-LGSFFLITASFLQIHLLKRLFDRKQ 174
M LG I S LQI LK+ F++K+
Sbjct: 185 IMSLG--ICIVVSGLQILYLKQYFEKKK 210
>sp|Q6IDL4|P24D3_ARATH Transmembrane emp24 domain-containing protein p24delta3
OS=Arabidopsis thaliana GN=At1g09580 PE=1 SV=1
Length = 217
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 34 VELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYHETPDFDIHV---AHY 90
+ + VT P + + + + F F + G Y CF H + I++
Sbjct: 70 ISVKVTSPYGNNLHNMENVTHGQFAFTTQESGNYLACFWADEKSHGNKNVSINIDWRTGI 129
Query: 91 AYHD--QHAKDEHINPILDQIAKLEEALYDIHFQQHWF-DAQTERQSIVNKTMSRRAIYK 147
A D AK E I + +I KLE A+ IH + + + + +++ KT SR A Y
Sbjct: 130 AAKDWASIAKKEKIEGVELEIRKLEGAVEAIHENILYLRNREADMRTMSEKTNSRVAWYS 189
Query: 148 AM-LGSFFLITASFLQIHLLKRLFDRKQ 174
M LG I S Q+ LK+ F++K+
Sbjct: 190 IMSLG--VCIAVSGFQVLYLKQYFEKKK 215
>sp|D3ZTX0|TMED7_RAT Transmembrane emp24 domain-containing protein 7 OS=Rattus
norvegicus GN=Tmed7 PE=1 SV=1
Length = 226
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 24/138 (17%)
Query: 56 TFEFVAYKKGLYKFCFTNK--SPYHETPDFDIHVAHYAYHDQHAKDEHINPILDQIAKL- 112
+F F A K G YKFCF+N+ + H+T FD V +D + P ++++ L
Sbjct: 97 SFTFTASKNGTYKFCFSNEFSTFTHKTVYFDFQV---------GEDPPLFPSENRVSALT 147
Query: 113 --EEALYDIH--------FQQHWFDAQTERQSIVNKTMSRRAIYKAMLGSFFLITASFLQ 162
E A IH +Q H+ + + +S + ++ R Y ++ + L+ S Q
Sbjct: 148 QMESACVSIHEALKSVIDYQTHFRLREAQGRSRA-EDLNTRVAYWSVGEALILLVVSIGQ 206
Query: 163 IHLLKRLF-DRKQGLSRV 179
+ LLK F D++ +RV
Sbjct: 207 VFLLKSFFSDKRTTTTRV 224
>sp|Q9Y3B3|TMED7_HUMAN Transmembrane emp24 domain-containing protein 7 OS=Homo sapiens
GN=TMED7 PE=1 SV=2
Length = 224
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 24/138 (17%)
Query: 56 TFEFVAYKKGLYKFCFTNK--SPYHETPDFDIHVAHYAYHDQHAKDEHINPILDQIAKL- 112
+F F A K G YKFCF+N+ + H+T FD V +D + P ++++ L
Sbjct: 95 SFTFTASKNGTYKFCFSNEFSTFTHKTVYFDFQV---------GEDPPLFPSENRVSALT 145
Query: 113 --EEALYDIH--------FQQHWFDAQTERQSIVNKTMSRRAIYKAMLGSFFLITASFLQ 162
E A IH +Q H+ + + +S + ++ R Y ++ + L+ S Q
Sbjct: 146 QMESACVSIHEALKSVIDYQTHFRLREAQGRSRA-EDLNTRVAYWSVGEALILLVVSIGQ 204
Query: 163 IHLLKRLF-DRKQGLSRV 179
+ LLK F D++ +RV
Sbjct: 205 VFLLKSFFSDKRTTTTRV 222
>sp|Q54BN0|TMEDB_DICDI Transmembrane emp24 domain-containing protein B OS=Dictyostelium
discoideum GN=empB PE=3 SV=1
Length = 209
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 11/131 (8%)
Query: 49 FDRRSTATFEFVAYKKGLYKFCFTNKSPYHETPDFDIHVAHYAYHDQH------AKDEHI 102
FD + F A + G YK CF N E F V + + + AK + I
Sbjct: 79 FDTQMKGKQSFTAGESGAYKVCFNN-----EMSRFTAKVVTFTWASEEEGVKEVAKGDSI 133
Query: 103 NPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAMLGSFFLITASFLQ 162
P+ + K+E L + +Q + + +++ + R ++ + L+ Q
Sbjct: 134 TPMDQSVQKIERVLQSVIHEQKKLRYREQANRDTSESTNARVVWWTIAEVIVLVVMGVGQ 193
Query: 163 IHLLKRLFDRK 173
I L++ FD K
Sbjct: 194 IWYLRKWFDNK 204
>sp|O81045|P24D8_ARATH Transmembrane emp24 domain-containing protein p24delta8
OS=Arabidopsis thaliana GN=At2g03290 PE=1 SV=1
Length = 213
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Query: 36 LTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTN---KSPYHETPDFDIHVA-HYA 91
+ V P + + + D+ F F AY+ G Y C T K T DFD H
Sbjct: 69 VKVMPPQGKNLHEADKVEAGQFSFTAYENGSYVACITAIDYKPETTLTIDFDWKTGVHSK 128
Query: 92 YHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAMLG 151
AK ++ + Q+ L + + IH + ++ + E +N++ + + + +
Sbjct: 129 EWTNVAKKSQVDMMEYQVKTLMDTVISIHEEMYYLREREEEMQELNRSTNSKMAWLSFGS 188
Query: 152 SFFLITASFLQIHLLKRLFDRKQ 174
++ + LQ LK F++K+
Sbjct: 189 LVVCLSVAGLQFWHLKTFFEKKK 211
>sp|O13770|YE98_SCHPO Uncharacterized membrane protein C17A5.08 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC17A5.08 PE=3 SV=1
Length = 210
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 6/145 (4%)
Query: 34 VELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYHETPDFDIHVAHY--- 90
V+ + PS + V +R A F +KG Y+FCF N + +
Sbjct: 60 VDYMIKAPSQKTVALGKKRRQADVFFTLEEKGEYEFCFDNHMSTFTDKIVTMEITMENEL 119
Query: 91 ---AYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYK 147
A AKD + + + ++ AL +I Q++F + R K+ R +
Sbjct: 120 SLPALTRDEAKDYKKDSMQSTVLEISTALSEIDRVQNYFKTREHRNYSTVKSTQARIFWF 179
Query: 148 AMLGSFFLITASFLQIHLLKRLFDR 172
++ S ++ S LQ+ ++K F R
Sbjct: 180 SLAESIMVVALSALQVFIVKTFFKR 204
>sp|Q9Y3Q3|TMED3_HUMAN Transmembrane emp24 domain-containing protein 3 OS=Homo sapiens
GN=TMED3 PE=1 SV=1
Length = 217
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 34 VELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNK--SPYHETPDFDIHVAHYA 91
V+ V P + ++ +F + A KG+Y+FCF+N+ + H+T FD V
Sbjct: 65 VDCYVEDPQGNTIYRETKKQYDSFTYRAEVKGVYQFCFSNEFSTFSHKTVYFDFQVGDEP 124
Query: 92 --YHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAM 149
D + + + + EAL + Q + + + + ++ R Y ++
Sbjct: 125 PILPDMGNRVTALTQMESACVTIHEALKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSV 184
Query: 150 LGSFFLITASFLQIHLLKRLFDRKQGLSR 178
+ L SF Q+ LLK F K+ +SR
Sbjct: 185 GETIALFVVSFSQVLLLKSFFTEKRPISR 213
>sp|Q8RWM6|P24D5_ARATH Transmembrane emp24 domain-containing protein p24delta5
OS=Arabidopsis thaliana GN=At1g21900 PE=1 SV=1
Length = 216
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 13/165 (7%)
Query: 18 FVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPY 77
+ VV NP + V VT P + + + F F + G Y CF S +
Sbjct: 55 YYVVDEHNP--ENTPAVSSKVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWIDSSH 112
Query: 78 H-ETP-----DFDIHVAHYAYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWF-DAQT 130
H P D+ + +A + D AK E I + Q+ +LE + I ++ D +
Sbjct: 113 HLANPITLGVDWKMGIAAKDW-DSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREA 171
Query: 131 ERQSIVNKTMSRRAIYKAM-LGSFFLITASFLQIHLLKRLFDRKQ 174
E + + T SR A + M LG ++ S QI LKR F +K+
Sbjct: 172 EMREVSETTNSRVAWFSIMSLGVCVVVVGS--QILYLKRYFHKKK 214
>sp|Q6C503|TMEDA_YARLI Endoplasmic reticulum vesicle protein 25 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=ERV25 PE=3 SV=1
Length = 211
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 16/168 (9%)
Query: 18 FVVVKADNPWHYSDEGVELTVT-----GPSDERVRDFDRRSTATFEFVAYKKGLYKFCFT 72
VVV ++P Y+D G +L+V G R+++ R TF +++ CF
Sbjct: 45 LVVVTVESP-KYAD-GQQLSVVVRDAHGNEYTRIKNVLGREITTFS--SHQDTALDVCFH 100
Query: 73 NKSPYHE----TPDFDIHVAHYAYH---DQHAKDEHINPILDQIAKLEEALYDIHFQQHW 125
N + H+ T + D+ VA A +Q E + P Q+ K+EE + ++ + ++
Sbjct: 101 NVANSHQDLGKTKEIDLSVAIGANARDWEQIQASEKLKPAEVQLRKIEEIVDEVDKEMNY 160
Query: 126 FDAQTERQSIVNKTMSRRAIYKAMLGSFFLITASFLQIHLLKRLFDRK 173
+ R N++ +RR + ++ + LI QI L+ F K
Sbjct: 161 LKMREIRLRDTNESTNRRVKFFSVGITLALIALGVWQIIYLRSYFRSK 208
>sp|P32803|EMP24_YEAST Endosomal protein P24B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=EMP24 PE=1 SV=1
Length = 203
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 8/165 (4%)
Query: 10 EGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRRST-ATFEFVAYKKGLYK 68
+GD L SF NP S + + GP V R ++ A KG ++
Sbjct: 39 KGDELSISFQF-GDRNPQSSSQLTGDFIIYGPERHEVLKTVRDTSHGEITLSAPYKGHFQ 97
Query: 69 FCFTNKSPYHETPD--FDIHVAHYAYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWF 126
+CF N++ ET D F+IH Y D D + N + + KL + ++ +Q +
Sbjct: 98 YCFLNENTGIETKDVTFNIHGVVYVDLD----DPNTNTLDSAVRKLSKLTREVKDEQSYI 153
Query: 127 DAQTERQSIVNKTMSRRAIYKAMLGSFFLITASFLQIHLLKRLFD 171
+ ++ + R + ++ +I S QI+ L+R F+
Sbjct: 154 VIRERTHRNTAESTNDRVKWWSIFQLGVVIANSLFQIYYLRRFFE 198
>sp|Q8GYG1|P24D7_ARATH Transmembrane emp24 domain-containing protein p24delta7
OS=Arabidopsis thaliana GN=At1g14010 PE=2 SV=1
Length = 212
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 4/149 (2%)
Query: 30 SDEGVELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYHETP---DFDIH 86
S V + VT P + D + F FVA + G Y CF+ ET DFD
Sbjct: 62 SSHKVTVRVTSPQGTAYHESDGVESGQFSFVAVETGDYISCFSAVDHKPETTLIIDFDWR 121
Query: 87 VA-HYAYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAI 145
H AK + + ++ KL E + IH + + + E +N + +
Sbjct: 122 TGIHTKDWSNVAKKSQVETMEFEVKKLFETVNGIHDEMFYLRDREEEMHNLNIATNSKMA 181
Query: 146 YKAMLGSFFLITASFLQIHLLKRLFDRKQ 174
+ + + ++ + LQ LK F +K+
Sbjct: 182 WLSFVSLAVCLSVAGLQFWHLKTFFQKKK 210
>sp|Q6AY25|TMED3_RAT Transmembrane emp24 domain-containing protein 3 OS=Rattus
norvegicus GN=Tmed3 PE=1 SV=1
Length = 221
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 56 TFEFVAYKKGLYKFCFTNK--SPYHETPDFDIHVAHYA--YHDQHAKDEHINPILDQIAK 111
+F + KG+Y+FCF+N+ + H+T FD V D + + +
Sbjct: 91 SFTYKTEVKGVYRFCFSNEFSTFSHKTVYFDFQVGDEPPILPDMGNRVTALTQMESACVT 150
Query: 112 LEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAMLGSFFLITASFLQIHLLKRLFD 171
+ EAL + Q + + + + ++ R Y ++ + L SF Q+ LLK F
Sbjct: 151 IHEALKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFT 210
Query: 172 RKQGLSR 178
K+ ++R
Sbjct: 211 EKRPINR 217
>sp|Q78IS1|TMED3_MOUSE Transmembrane emp24 domain-containing protein 3 OS=Mus musculus
GN=Tmed3 PE=2 SV=1
Length = 221
Score = 37.0 bits (84), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 56 TFEFVAYKKGLYKFCFTNK--SPYHETPDFDIHVAHYAYHDQHAKDEHINPILDQIAKLE 113
+F + KG+Y+FCF+N+ + H+T FD V D+ + + + ++E
Sbjct: 91 SFTYKTEAKGVYRFCFSNEFSTFSHKTVYFDFQVG-----DEPPILPDMGNRVTALTQME 145
Query: 114 EALYDIH-FQQHWFDAQT-----ERQSIVN-KTMSRRAIYKAMLGSFFLITASFLQIHLL 166
A IH + D+QT E Q + ++ R Y ++ + L SF Q+ LL
Sbjct: 146 SACVTIHEALKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLL 205
Query: 167 KRLFDRKQGLSR 178
K F K+ ++R
Sbjct: 206 KSFFTEKRPVNR 217
>sp|Q3T133|TMED9_BOVIN Transmembrane emp24 domain-containing protein 9 OS=Bos taurus
GN=TMED9 PE=2 SV=1
Length = 235
Score = 36.6 bits (83), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 33 GVELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCF-TNKSPYHETPD------FDI 85
G+ + V P D+ + S F F ++ G ++ C +N + + DI
Sbjct: 84 GMFVEVKDPEDKVILARQYGSEGRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDI 143
Query: 86 HVAHYA--YHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRR 143
V +A Y + AKD+ ++ + ++ +L E + I +Q++ + ER +++ ++R
Sbjct: 144 QVGEHANDYAEIAAKDK-LSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQR 202
Query: 144 AIYKAMLGSFFLITASFLQIHLLKRLFDRKQ 174
++ ++L + L+ Q+ LK F+ K+
Sbjct: 203 VLWWSILQTLILVAIGVWQMRHLKSFFEAKK 233
>sp|Q5I0E7|TMED9_RAT Transmembrane emp24 domain-containing protein 9 OS=Rattus
norvegicus GN=Tmed9 PE=1 SV=1
Length = 235
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 33 GVELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCF-TNKSPYHETPD------FDI 85
G+ + V P D+ + S F F ++ G ++ C +N + + DI
Sbjct: 84 GMFVEVKDPEDKVILARQYGSEGRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDI 143
Query: 86 HVAHYA--YHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRR 143
V +A Y + AKD+ ++ + ++ +L E + I +Q++ + ER +++ ++R
Sbjct: 144 QVGEHANDYAEIAAKDK-LSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQR 202
Query: 144 AIYKAMLGSFFLITASFLQIHLLKRLFDRKQ 174
++ ++L + L+ Q+ LK F+ K+
Sbjct: 203 VLWWSILQTLILVAIGVWQMRHLKSFFEAKK 233
>sp|Q99KF1|TMED9_MOUSE Transmembrane emp24 domain-containing protein 9 OS=Mus musculus
GN=Tmed9 PE=2 SV=2
Length = 235
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 33 GVELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCF-TNKSPYHETPD------FDI 85
G+ + V P D+ + S F F ++ G ++ C +N + + DI
Sbjct: 84 GMFVEVKDPEDKVILARQYGSEGRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDI 143
Query: 86 HVAHYA--YHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRR 143
V +A Y + AKD+ ++ + ++ +L E + I +Q++ + ER +++ ++R
Sbjct: 144 QVGEHANDYAEIAAKDK-LSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQR 202
Query: 144 AIYKAMLGSFFLITASFLQIHLLKRLFDRKQ 174
++ ++L + L+ Q+ LK F+ K+
Sbjct: 203 VLWWSILQTLILVAIGVWQMRHLKSFFEAKK 233
>sp|Q9BVK6|TMED9_HUMAN Transmembrane emp24 domain-containing protein 9 OS=Homo sapiens
GN=TMED9 PE=1 SV=2
Length = 235
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 33 GVELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCF-TNKSPYHETPD------FDI 85
G+ + V P D+ + S F F ++ G ++ C +N + + DI
Sbjct: 84 GMFVEVKDPEDKVILARQYGSEGRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDI 143
Query: 86 HVAHYA--YHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRR 143
V +A Y + AKD+ ++ + ++ +L E + I +Q++ + ER +++ ++R
Sbjct: 144 QVGEHANDYAEIAAKDK-LSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQR 202
Query: 144 AIYKAMLGSFFLITASFLQIHLLKRLFDRKQ 174
++ ++L + L+ Q+ LK F+ K+
Sbjct: 203 VLWWSILQTLILVAIGVWQMRHLKSFFEAKK 233
>sp|Q6BTC2|TMEDA_DEBHA Endoplasmic reticulum vesicle protein 25 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=ERV25 PE=3 SV=2
Length = 214
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 9/145 (6%)
Query: 38 VTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNK--SPYHETPDFDIHVAHYAYHDQ 95
V +E R D + F ++ + CFTN+ + + +F +
Sbjct: 67 VDSLGNEYRRKNDIAGSVKIGFTSHNSAAFDICFTNQLERKWSKNTNFVREIELDVESGA 126
Query: 96 HAKD-------EHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKA 148
A+D E + P+ + ++EE Y+I + + A+ ER N++ + R + +
Sbjct: 127 AARDWNAVQAAEKLKPVEVDLRRIEETTYEISGELQYLKAREERMRDTNESTNSRVKWFS 186
Query: 149 MLGSFFLITASFLQIHLLKRLFDRK 173
+L L+ Q+ L+ F K
Sbjct: 187 ILVITSLVGLGAWQVQYLRHYFKVK 211
>sp|Q8VY92|P24DA_ARATH Transmembrane emp24 domain-containing protein p24delta10
OS=Arabidopsis thaliana GN=At1g69460 PE=1 SV=1
Length = 214
Score = 34.3 bits (77), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 34 VELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFT---NKSPYHETPDFD--IHVA 88
+ + VT S ++ + F F A + G Y CFT +K + DF+ V
Sbjct: 68 ISVKVTSNSGNNYHHAEQVDSGQFAFSAVEAGDYMACFTAVDHKPEVSLSIDFEWKTGVQ 127
Query: 89 HYAYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKA 148
++ + AK + + ++ L + + IH + ++ + E +N++ + + + +
Sbjct: 128 SKSWANV-AKKSQVEVMEFEVKSLLDTVNSIHEEMYYLRDREEEMQDLNRSTNTKMAWLS 186
Query: 149 MLGSFFLITASFLQIHLLKRLFDRKQ 174
+L F I + +Q LK F++K+
Sbjct: 187 VLSFFVCIGVAGMQFLHLKTFFEKKK 212
>sp|P54837|TMEDA_YEAST Endoplasmic reticulum vesicle protein 25 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ERV25 PE=1
SV=1
Length = 211
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 8/141 (5%)
Query: 39 TGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYH-----ETPDFDIHVAHYAYH 93
G R RDF F A + CF N++ Y + DI A
Sbjct: 70 VGNEYRRKRDF--AGDVRVAFTAPSSTAFDVCFENQAQYRGRSLSRAIELDIESGAEARD 127
Query: 94 -DQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAMLGS 152
++ + +E + PI ++ ++EE +I + + + ER N++ +RR ++L
Sbjct: 128 WNKISANEKLKPIEVELRRVEEITDEIVDELTYLKNREERLRDTNESTNRRVRNFSILVI 187
Query: 153 FFLITASFLQIHLLKRLFDRK 173
L + Q++ LK F K
Sbjct: 188 IVLSSLGVWQVNYLKNYFKTK 208
>sp|P53198|ERP6_YEAST Protein ERP6 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ERP6 PE=1 SV=1
Length = 216
Score = 33.1 bits (74), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 29 YSDEGVELTVTGPSDERVRDFDRRSTAT--FEFVAYKKGLYKFCFTNK-----SPYHETP 81
Y+D G+ + V D R ++ + + F F+A + G YK C ++
Sbjct: 63 YNDYGIVIDVEEVFDNNHRVVHQQGSPSGDFSFLALESGEYKICLQSRVNNWVGKTKTKL 122
Query: 82 DFDIHVAHYAYHDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMS 141
+ + V A D K E + + +++ L + DI +Q + E ++++++
Sbjct: 123 EIEFEVGFEAMLDMQRK-ETLESLHGKVSILNSKIVDIRREQQLMREREESFRDISESVN 181
Query: 142 RRAIYKAMLGSFFLITASFLQIHLLKRLFDRKQGL 176
RA++ + LI Q+ L+ F +++ L
Sbjct: 182 SRAMWWTVTQVTLLIIICVWQMKSLRSFFVKQKVL 216
>sp|Q28BQ6|TMED1_XENTR Transmembrane emp24 domain-containing protein 1 OS=Xenopus
tropicalis GN=tmed1 PE=2 SV=1
Length = 220
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 23/161 (14%)
Query: 34 VELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYHETPDFDIHVAHYAYH 93
V+ +VT PS + RRS + G Y CF N T + +
Sbjct: 63 VDFSVTTPSGILLIMERRRSDGVHTVEPTEAGDYMICFDNS---FSTISEKLVFFELIFD 119
Query: 94 DQHAKDEH------INP--ILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSR--- 142
+Q +E + P +LD KLE+ I + + + Q+++ +R
Sbjct: 120 NQQGDEEPDSWADVVEPDELLD--IKLEDIKESIESVKSRLERSIQMQTVLRAFEARDRN 177
Query: 143 -------RAIYKAMLGSFFLITASFLQIHLLKRLFDRKQGL 176
R + + + L+T +FLQ+++LK LFD K+ +
Sbjct: 178 LQDSNLERVNFWSAINVGVLVTVAFLQVYMLKSLFDDKRKI 218
>sp|B1MGD5|RL5_MYCA9 50S ribosomal protein L5 OS=Mycobacterium abscessus (strain ATCC
19977 / DSM 44196) GN=rplE PE=3 SV=1
Length = 187
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 17/88 (19%)
Query: 19 VVVKADNPWHYSDEGVELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYH 78
V ++ D W + D V + + R+RDF S F+ KG Y F T +S +H
Sbjct: 96 VTLRGDRMWEFLDRLVSIAL-----PRIRDFRGLSPKQFD----GKGNYTFGLTEQSMFH 146
Query: 79 ETP--------DFDIHVAHYAYHDQHAK 98
E DI V A D +
Sbjct: 147 EIDVDSIDRPRGMDITVVTSATTDDEGR 174
>sp|Q9LJV9|P24DB_ARATH Transmembrane emp24 domain-containing protein p24delta11
OS=Arabidopsis thaliana GN=At3g29070 PE=2 SV=1
Length = 225
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 71/185 (38%), Gaps = 13/185 (7%)
Query: 4 SHNVECEGDTLHCSFVVVKA-----DNPWHYSDEGVEL--TVTGPSDERVRDFDRRSTAT 56
S N +C D + +++ V N H+ +L TV+ P + + +
Sbjct: 42 SGNTKCISDDIKTNYMTVGTYSIVNPNEGHHLPPSHKLFVTVSSPKGKSHHHAENVESGK 101
Query: 57 FEFVAYKKGLYKFCFTNKSPYHETPDFDIHVAHYAYHDQH-----AKDEHINPILDQIAK 111
F F A + G Y CF Y T F + + + AK I + ++ K
Sbjct: 102 FVFTAEETGDYMTCFVAPG-YRPTAKFAVDFEWKSGVEAKDWTTIAKRGQITMLEVEVRK 160
Query: 112 LEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAMLGSFFLITASFLQIHLLKRLFD 171
L + IH + + +N++ + R ++L ++ + LQ+ LK +
Sbjct: 161 LLDVTETIHEEMFQLIEREREMQELNRSTNSRMAALSLLSFVVTMSVAGLQLRHLKSFLE 220
Query: 172 RKQGL 176
RK+ L
Sbjct: 221 RKKLL 225
>sp|P38819|ERP5_YEAST Protein ERP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ERP5 PE=1 SV=1
Length = 212
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 18/146 (12%)
Query: 39 TGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKSPYHETPD------FDIHVAHYAY 92
T +D RV + T F A G ++FCFT P++ ++ + +
Sbjct: 73 TFDNDHRVLNQKNSHTGDVTFTALDTGEHRFCFT---PFYSKKSATLRVFIELEIGNVEA 129
Query: 93 HDQHAKDEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAMLGS 152
D K E +N + ++ +L + L I +Q DA E+++ + S A K M S
Sbjct: 130 LDSKKK-EDMNSLKGRVGQLTQRLSSIRKEQ---DAIREKEAEF-RNQSESANSKIMTWS 184
Query: 153 FF----LITASFLQIHLLKRLFDRKQ 174
F L+ Q+ LK F +++
Sbjct: 185 VFQLLILLGTCAFQLRYLKNFFVKQK 210
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,399,149
Number of Sequences: 539616
Number of extensions: 2676994
Number of successful extensions: 5428
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 5406
Number of HSP's gapped (non-prelim): 43
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)