Query 040712
Match_columns 179
No_of_seqs 125 out of 1057
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 17:50:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040712.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040712hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1olm_A SEC14-like protein 2; l 95.0 0.14 4.8E-06 41.2 9.1 32 58-89 352-385 (403)
2 2p9r_A Alpha-2-M, alpha-2-macr 92.9 1.1 3.8E-05 28.5 9.0 65 10-75 15-86 (102)
3 2ee9_A Filamin-B; beta-sandwic 89.4 0.67 2.3E-05 29.6 4.7 45 31-75 29-76 (95)
4 2d7n_A Filamin-C; beta-sandwic 89.0 0.97 3.3E-05 28.6 5.3 45 31-75 21-68 (93)
5 2d7p_A Filamin-C; beta-sandwic 87.7 2.8 9.4E-05 27.4 7.1 55 16-75 30-87 (112)
6 4dzg_A PLIG; lysozyme inhibito 86.6 2 6.7E-05 28.3 5.8 55 10-74 38-95 (114)
7 2ee6_A Filamin-B; beta-sandwic 85.5 3.2 0.00011 26.6 6.4 43 31-74 41-85 (105)
8 3cnk_A Filamin-A; FLNA24, X-RA 85.3 4.1 0.00014 25.1 6.6 55 16-74 18-75 (89)
9 3rgh_A Filamin-A; cell adhesio 85.3 5.2 0.00018 25.3 7.3 53 17-73 28-83 (100)
10 2d7m_A Filamin-C; beta-sandwic 85.0 4.1 0.00014 26.5 6.8 55 17-75 33-90 (115)
11 2dlg_A Filamin-B; beta-sandwic 84.6 1.6 5.5E-05 28.1 4.6 45 31-75 30-77 (102)
12 2dj4_A Filamin-B; beta-sandwic 84.3 5.6 0.00019 25.5 7.2 56 16-75 31-89 (108)
13 2dic_A Filamin-B; beta-sandwic 84.0 4.5 0.00015 25.9 6.6 53 17-74 31-85 (105)
14 1v05_A Filamin C; actin-bindin 83.8 5.3 0.00018 24.9 6.8 44 31-74 36-82 (96)
15 2eea_A Filamin-B; beta-sandwic 83.5 7.1 0.00024 25.3 7.7 53 17-74 41-95 (115)
16 2dmb_A Filamin-B; beta-sandwic 83.2 4 0.00014 27.1 6.2 45 31-75 42-89 (124)
17 2bp3_A Filamin A; structural p 83.1 5.8 0.0002 24.9 6.7 53 17-74 26-80 (97)
18 2nqc_A Filamin-C; immunoglobul 81.9 6.6 0.00023 26.6 7.0 43 31-74 75-118 (138)
19 2w0p_A Filamin-A; alternative 81.4 5 0.00017 25.0 5.9 44 31-74 33-77 (94)
20 2e9j_A Filamin-B; beta-sandwic 80.7 3.7 0.00013 26.9 5.3 55 17-75 43-100 (119)
21 4b7l_A Filamin-B; structural p 78.2 5.8 0.0002 31.3 6.5 55 16-74 275-334 (347)
22 2k9u_A Gamma filamin; cytoskel 77.7 12 0.00041 24.4 7.4 43 31-74 48-92 (119)
23 2eec_A Filamin-B; beta-sandwic 77.0 9.5 0.00033 25.3 6.5 54 17-75 41-95 (125)
24 3osv_A Flagellar basal-BODY RO 76.9 7.2 0.00025 26.3 5.9 56 12-74 24-90 (138)
25 2dmc_A Filamin-B; beta-sandwic 76.5 1.9 6.6E-05 28.4 2.8 45 31-75 44-91 (116)
26 2k7p_A Filamin-A; IG-like, ABP 75.6 13 0.00043 26.4 7.2 53 17-74 117-171 (188)
27 2dia_A Filamin-B; beta-sandwic 75.0 12 0.00041 24.1 6.5 45 31-75 41-88 (113)
28 2di9_A Filamin-B; beta-sandwic 74.9 15 0.0005 24.5 7.0 53 17-74 51-105 (131)
29 3d33_A Domain of unknown funct 74.7 4.7 0.00016 26.3 4.3 56 11-75 37-97 (108)
30 3irp_X URO-adherence factor A; 74.6 3.1 0.0001 33.9 4.1 45 31-75 329-373 (429)
31 3c12_A FLGD, flagellar protein 72.5 12 0.0004 25.2 6.1 43 32-74 39-92 (138)
32 1qfh_A Protein (gelation facto 72.5 5.3 0.00018 28.9 4.6 45 30-75 133-180 (212)
33 3isy_A Bsupi, intracellular pr 72.4 18 0.00062 23.9 7.7 64 10-73 16-88 (120)
34 2d7o_A Filamin-C; beta-sandwic 71.2 9.4 0.00032 24.6 5.2 53 17-74 31-85 (111)
35 1wlh_A Gelation factor; ABP-12 70.9 6.3 0.00021 30.2 5.0 44 31-75 233-279 (311)
36 1jcd_A Major outer membrane li 70.5 12 0.0004 20.9 5.5 45 100-144 4-48 (52)
37 2k8e_A UPF0339 protein YEGP; p 70.1 12 0.00042 25.1 5.6 61 10-76 13-91 (130)
38 2di8_A Filamin-B; beta-sandwic 70.0 19 0.00065 23.1 6.7 43 31-74 41-85 (111)
39 2k7p_A Filamin-A; IG-like, ABP 68.8 7.2 0.00025 27.7 4.6 44 31-74 33-79 (188)
40 2ds4_A Tripartite motif protei 66.6 16 0.00054 23.2 5.6 45 31-75 48-97 (113)
41 4fxk_A Complement C4 beta chai 65.2 50 0.0017 27.7 9.9 63 10-74 133-201 (656)
42 2dib_A Filamin-B; beta-sandwic 64.7 5.6 0.00019 26.3 3.1 45 31-75 56-103 (128)
43 1qle_D Cytochrome AA3, ccytoch 63.3 15 0.00052 19.6 4.5 28 133-160 13-40 (43)
44 2k7q_A Filamin-A; IG-like, ABP 63.3 11 0.00037 26.8 4.6 43 31-74 127-171 (191)
45 2k7q_A Filamin-A; IG-like, ABP 63.0 11 0.00038 26.7 4.7 46 30-75 29-77 (191)
46 2hr0_A Complement C3 beta chai 61.2 75 0.0025 26.9 10.5 63 10-74 119-189 (645)
47 1gl2_D Syntaxin 8, vesicle tra 60.8 21 0.00073 20.5 5.5 47 99-145 8-54 (65)
48 1m56_D Cytochrome C oxidase; m 59.8 20 0.00069 19.9 5.0 29 133-161 21-49 (51)
49 4g9s_B Inhibitor of G-type lys 59.7 16 0.00055 23.5 4.6 42 33-74 48-92 (111)
50 3hd7_B Syntaxin-1A; membrane p 58.6 33 0.0011 22.0 9.3 20 100-119 21-40 (109)
51 2nps_D Syntaxin-6; vesicle fus 58.4 28 0.00096 21.1 6.4 47 99-145 18-64 (82)
52 3sd2_A Putative member of DUF3 54.7 39 0.0013 21.6 5.5 54 13-75 35-91 (101)
53 2j3s_A Filamin-A; cytoskeleton 53.4 12 0.00041 28.4 3.6 44 31-74 130-176 (288)
54 3hrz_A Cobra venom factor; ser 53.1 46 0.0016 28.3 7.5 63 10-74 117-182 (627)
55 2pn5_A TEP1R, thioester-contai 52.3 87 0.003 29.1 9.7 64 10-74 113-184 (1325)
56 3bid_A UPF0339 protein NMB1088 51.3 31 0.0011 20.0 4.4 28 17-50 2-29 (64)
57 4acq_A Alpha-2-macroglobulin; 49.0 1.1E+02 0.0039 28.8 9.9 63 10-74 117-187 (1451)
58 3cu7_A Complement C5; Mg domai 47.9 66 0.0023 30.8 8.3 64 10-75 137-207 (1676)
59 2j3s_A Filamin-A; cytoskeleton 43.5 53 0.0018 24.7 5.9 43 31-74 227-271 (288)
60 1sfc_D Protein (SNAP-25B), pro 43.3 55 0.0019 20.0 5.3 46 100-145 29-74 (87)
61 2x5p_A FBA2, fibronectin bindi 43.3 23 0.00078 23.4 3.3 52 32-85 43-97 (121)
62 3ogl_Q JAZ1 incomplete degron 42.1 8.9 0.00031 17.1 0.7 10 165-174 9-18 (21)
63 1n7s_D SNAP-25A; neuronal snar 41.9 48 0.0017 19.0 5.3 46 100-145 10-55 (66)
64 1wlh_A Gelation factor; ABP-12 40.1 40 0.0014 25.6 4.8 44 31-74 142-188 (311)
65 3e8v_A Possible transglutamina 40.0 30 0.001 21.2 3.1 41 30-70 16-66 (82)
66 3fn2_A Putative sensor histidi 39.8 33 0.0011 22.0 3.4 40 33-72 49-91 (106)
67 2akf_A Coronin-1A; coiled coil 39.3 34 0.0012 16.5 3.7 19 104-122 3-21 (32)
68 2b39_A C3; thioester, immune d 36.9 1.2E+02 0.004 29.1 8.1 63 10-74 140-210 (1661)
69 3okq_A BUD site selection prot 36.3 99 0.0034 20.9 6.1 41 114-154 90-130 (141)
70 1qfh_A Protein (gelation facto 35.9 54 0.0018 23.4 4.6 44 31-74 43-89 (212)
71 2yko_A LINE-1 ORF1P; RNA-bindi 35.3 1.1E+02 0.0038 22.6 6.1 30 100-129 6-35 (233)
72 3prx_B Cobra venom factor; imm 33.9 1.5E+02 0.005 28.5 8.2 63 10-74 139-204 (1642)
73 2lsj_B DNA polymerase kappa; R 39.4 9 0.00031 17.9 0.0 10 166-175 6-15 (26)
74 1dip_A Delta-sleep-inducing pe 31.6 85 0.0029 18.7 4.4 33 96-128 11-43 (78)
75 2xwx_A GBPA, glcnac-binding pr 30.2 1.1E+02 0.0039 24.4 6.0 58 11-74 310-373 (391)
76 2pnv_A Small conductance calci 30.1 67 0.0023 17.0 3.2 19 104-122 20-38 (43)
77 3ogk_Q JAZ1 incomplete degron 28.6 16 0.00055 16.5 0.4 10 165-174 4-13 (22)
78 1l4a_D S-SNAP25 fusion protein 28.2 88 0.003 19.1 4.0 45 100-144 30-74 (87)
79 2k7i_A UPF0339 protein ATU0232 27.6 65 0.0022 19.7 3.2 29 14-49 22-50 (83)
80 2wy3_B UL16, uncharacterized p 27.5 63 0.0021 21.3 3.3 79 2-90 38-135 (158)
81 2iub_A CORA, divalent cation t 26.9 1.9E+02 0.0064 22.5 6.7 21 136-156 295-315 (363)
82 3afg_A Subtilisin-like serine 26.8 1E+02 0.0036 25.5 5.4 56 31-87 458-515 (539)
83 2k49_A UPF0339 protein SO_3888 26.0 1.1E+02 0.0037 20.0 4.3 52 16-73 3-72 (118)
84 1gd2_E Transcription factor PA 26.0 76 0.0026 18.7 3.2 30 99-128 28-57 (70)
85 4hci_A Cupredoxin 1; structura 25.2 1.2E+02 0.0041 18.4 4.7 17 54-70 68-85 (100)
86 2l5g_A GPS2 protein, G protein 25.2 77 0.0026 16.2 2.7 22 102-123 10-31 (38)
87 1gu3_A Endoglucanase C; carboh 24.6 57 0.002 22.1 2.9 27 7-40 54-80 (149)
88 3kpt_A Collagen adhesion prote 24.4 1.1E+02 0.0039 23.8 5.0 42 31-72 266-313 (355)
89 1wmd_A Protease; alpha-beta hy 24.2 1.1E+02 0.0039 24.3 5.1 43 32-74 366-419 (434)
90 4ani_A Protein GRPE; chaperone 23.7 2.1E+02 0.0072 20.7 7.3 49 101-149 67-115 (213)
91 1f7l_A Holo-(acyl carrier prot 23.7 1.3E+02 0.0044 19.0 4.5 39 33-72 76-114 (121)
92 3l4f_A RHO guanine nucleotide 23.6 1.1E+02 0.0038 17.5 6.7 41 104-144 4-47 (61)
93 4gym_A Glyoxalase/bleomycin re 23.2 45 0.0015 21.7 2.2 14 33-46 115-128 (149)
94 2oqq_A Transcription factor HY 22.7 95 0.0032 16.3 3.7 25 103-127 13-37 (42)
95 4ev6_A Magnesium transport pro 22.3 2.6E+02 0.0091 21.3 7.3 12 138-149 273-284 (339)
96 2r5o_A Putative ATP binding co 21.3 58 0.002 22.8 2.5 37 10-49 68-104 (188)
97 2lme_A Adhesin YADA; trimeric 21.1 1.4E+02 0.0046 18.9 4.0 27 98-124 7-33 (105)
No 1
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=95.02 E-value=0.14 Score=41.24 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=27.1
Q ss_pred EEEcccccceeEeEEcCCC--CceeeEEEEEecc
Q 040712 58 EFVAYKKGLYKFCFTNKSP--YHETPDFDIHVAH 89 (179)
Q Consensus 58 ~f~~~~~G~y~~Cf~n~~s--~~~~V~f~~~~~~ 89 (179)
++++.++|.|.++|+|++| ..|.|.+.+.+..
T Consensus 352 ~~~~~~~G~y~l~fdNs~S~~~~k~l~y~v~v~~ 385 (403)
T 1olm_A 352 TLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLL 385 (403)
T ss_dssp EEECCSCEEEEEEEECTTCCCCSEEEEEEEEEEC
T ss_pred EEEcCCCeEEEEEEeccccceeceEEEEEEEEeC
Confidence 4678999999999999988 4799988888743
No 2
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=92.94 E-value=1.1 Score=28.51 Aligned_cols=65 Identities=18% Similarity=0.264 Sum_probs=40.8
Q ss_pred CCcEEEEEEEEEeCCCCCCCCCCceEEEEECCCCCeeecccce--eeee--EEEEc---ccccceeEeEEcCC
Q 040712 10 EGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRR--STAT--FEFVA---YKKGLYKFCFTNKS 75 (179)
Q Consensus 10 ~~~~i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~--~~g~--f~f~~---~~~G~y~~Cf~n~~ 75 (179)
+|+.|.+..-+.+.+ ..+.....+.+.|.||+|+.+.+.... ..|. ++|.. ...|.|++......
T Consensus 15 PGetV~~~~~~~~~~-~~p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~~ 86 (102)
T 2p9r_A 15 PGQTVKFRVVSMDEN-FHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKS 86 (102)
T ss_dssp TTCEEEEEEEEECGG-GCBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTT
T ss_pred CCCEEEEEEEEECCC-CcCCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEECC
Confidence 578888887777543 212223347899999999988764222 1233 23333 24699999998653
No 3
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.41 E-value=0.67 Score=29.59 Aligned_cols=45 Identities=13% Similarity=0.118 Sum_probs=31.9
Q ss_pred CCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcCC
Q 040712 31 DEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~~ 75 (179)
..++.+.|.+|+|..+-.. .+...| ..+|+..+.|.|++++.-..
T Consensus 29 ~~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~G 76 (95)
T 2ee9_A 29 KGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMG 76 (95)
T ss_dssp TTSEEEEEECTTSCEECCEEEECSSSCEEEECCCCSSEEEEEEEEESS
T ss_pred CCCEEEEEECCCCCccccEEEeCCCCeEEEEEEecCCEeEEEEEEECC
Confidence 5689999999999765332 112233 46678889999999998554
No 4
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=88.97 E-value=0.97 Score=28.64 Aligned_cols=45 Identities=18% Similarity=0.210 Sum_probs=32.0
Q ss_pred CCceEEEEECCCCCeeecc-cceee--eeEEEEcccccceeEeEEcCC
Q 040712 31 DEGVELTVTGPSDERVRDF-DRRST--ATFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~-~~~~~--g~f~f~~~~~G~y~~Cf~n~~ 75 (179)
..++.+.|.+|+|..+.-. .+... -..+|++.+.|.|.+++.-..
T Consensus 21 ~~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~g 68 (93)
T 2d7n_A 21 KGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDG 68 (93)
T ss_dssp SSCEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEESS
T ss_pred CCCEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEECC
Confidence 3579999999999755322 11123 456778899999999998553
No 5
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=87.73 E-value=2.8 Score=27.38 Aligned_cols=55 Identities=16% Similarity=0.210 Sum_probs=36.8
Q ss_pred EEEEEEeCCCCCCCCCCceEEEEECCCCCeeecc-ccee--eeeEEEEcccccceeEeEEcCC
Q 040712 16 CSFVVVKADNPWHYSDEGVELTVTGPSDERVRDF-DRRS--TATFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 16 ~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~-~~~~--~g~f~f~~~~~G~y~~Cf~n~~ 75 (179)
.+|.|...+. ...+.+.|.+|+|..+--. .... .-..+|+..+.|.|.+.+.-..
T Consensus 30 ~~F~V~~~~a-----~g~l~v~V~~P~g~~~~~~v~d~~~gty~v~ytP~~~G~h~v~V~~~g 87 (112)
T 2d7p_A 30 ASFAVQLNGA-----RGVIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNG 87 (112)
T ss_dssp EEEEEECTTC-----CSCEEEEEECSSSCBCCCEECSCBTTEEEEEECCSSCEEEEEEEEESS
T ss_pred EEEEEEeCCC-----CCCEEEEEECCCCCeeeeEEEeCCCCeEEEEEEcCCCEeEEEEEEECC
Confidence 4566655442 3589999999999754332 1122 3456788899999999987543
No 6
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=86.57 E-value=2 Score=28.29 Aligned_cols=55 Identities=11% Similarity=0.116 Sum_probs=36.7
Q ss_pred CCcEEEEEEEEEeCCCCCCCCCCceEEEEECCCCCe---eecccceeeeeEEEEcccccceeEeEEcC
Q 040712 10 EGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDER---VRDFDRRSTATFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 10 ~~~~i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~---v~~~~~~~~g~f~f~~~~~G~y~~Cf~n~ 74 (179)
+|..+++.. . ++ ..+-+.|.+|+|.. ++..+....+.++-+.+.+|.|++=+...
T Consensus 38 aGQ~l~V~l--s-~~-------~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 38 AGQTMTVXI--G-GS-------SNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp CCCEEEC-C--E-ES-------TTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEECC
T ss_pred CCCEEEEEe--C-CC-------CcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEec
Confidence 466665555 2 22 25788899999874 34433223458888999999999999876
No 7
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.54 E-value=3.2 Score=26.57 Aligned_cols=43 Identities=21% Similarity=0.438 Sum_probs=31.5
Q ss_pred CCceEEEEECCCCCeeecccceeee--eEEEEcccccceeEeEEcC
Q 040712 31 DEGVELTVTGPSDERVRDFDRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
...+.+.|.+|++..+-- .+...| ..+|+..+.|.|.+.+.-.
T Consensus 41 ~~~l~v~v~~p~~~~v~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (105)
T 2ee6_A 41 AGGLSIAVEGPSKAEITF-DDHKNGSCGVSYIAQEPGNYEVSIKFN 85 (105)
T ss_dssp CCCEEEEEESSSCEEEEE-CCCCSSCCCEEEEESSCEEEEEEEEET
T ss_pred CCcEEEEEECCCCCEEEE-EECCCCEEEEEEEECCCceEEEEEEEC
Confidence 468999999999865522 223344 5778888999999999744
No 8
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=85.30 E-value=4.1 Score=25.10 Aligned_cols=55 Identities=16% Similarity=0.231 Sum_probs=33.7
Q ss_pred EEEEEEeCCCCCCCCCCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcC
Q 040712 16 CSFVVVKADNPWHYSDEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 16 ~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
..|.|...++ ....+.+.|.+|+|..+... .+...| ..+|+..+.|.|.+.+.-.
T Consensus 18 ~~F~v~~~~a----G~~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 75 (89)
T 3cnk_A 18 SSFTVDCSKA----GNNMLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWG 75 (89)
T ss_dssp EEEEEECTTS----CSCCEEEEEECSSSCCSEEEEEEEETTEEEEEEECCSCEEEEEEEEET
T ss_pred EEEEEEECcC----CCCcEEEEEECCCCCceeEEEEECCCCEEEEEEEECCCccEEEEEEEC
Confidence 3455554332 24679999999998633221 122233 4567788888888888744
No 9
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=85.27 E-value=5.2 Score=25.31 Aligned_cols=53 Identities=9% Similarity=0.223 Sum_probs=33.1
Q ss_pred EEEEEeCCCCCCCCCCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEc
Q 040712 17 SFVVVKADNPWHYSDEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTN 73 (179)
Q Consensus 17 ~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n 73 (179)
+|.|...+. ....+.+.|.+|+|..+.-. .+...| ..+|+....|.|.+.+.-
T Consensus 28 ~F~V~~~~a----G~~~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~p~~~G~y~i~V~~ 83 (100)
T 3rgh_A 28 QFQVDCSSA----GSAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKY 83 (100)
T ss_dssp EEEEECTTS----CSCCEEEEEECTTSCBCEEEEEECSSSEEEEEEECCSSEEEEEEEEE
T ss_pred EEEEEECCC----CCceEEEEEECCCCCEeEEEEEeCCCCEEEEEEEeCCCeeEEEEEEE
Confidence 455554432 25689999999998654322 112233 466777888888888763
No 10
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=85.04 E-value=4.1 Score=26.51 Aligned_cols=55 Identities=11% Similarity=0.233 Sum_probs=35.4
Q ss_pred EEEEEeCCCCCCCCCCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcCC
Q 040712 17 SFVVVKADNPWHYSDEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 17 ~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~~ 75 (179)
.|.|...+. ....+.+.|.+|+|..+... .+...| ..+|+..+.|.|.+.+.-..
T Consensus 33 ~F~V~~~da----G~~~l~V~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 90 (115)
T 2d7m_A 33 EFTIDARDA----GEGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGG 90 (115)
T ss_dssp EEEEEESSS----CSSCEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEEEESS
T ss_pred EEEEEECCC----CCCEEEEEEECCCCCeeeeEEEECCCCEEEEEEEeCCCceEEEEEEECC
Confidence 455554332 24579999999998644332 112234 45678888999999987543
No 11
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=84.59 E-value=1.6 Score=28.06 Aligned_cols=45 Identities=16% Similarity=0.178 Sum_probs=32.1
Q ss_pred CCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcCC
Q 040712 31 DEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~~ 75 (179)
...+.+.|.+|+|..+--. .....| ..+|+..+.|.|.+.+.-..
T Consensus 30 ~~~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP~e~G~h~v~V~~~g 77 (102)
T 2dlg_A 30 SSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRG 77 (102)
T ss_dssp GGGCEEEEECTTSCEEECEEEECSSSEEEEEBCCCTTCEEEEEEESSS
T ss_pred CCCEEEEEECCCCCEeeeEEEECCCCEEEEEEEecCCEeEEEEEEECC
Confidence 5689999999999754432 112233 46678889999999998554
No 12
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=84.31 E-value=5.6 Score=25.50 Aligned_cols=56 Identities=18% Similarity=0.178 Sum_probs=35.5
Q ss_pred EEEEEEeCCCCCCCCCCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcCC
Q 040712 16 CSFVVVKADNPWHYSDEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 16 ~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~~ 75 (179)
..|.|...+. ....+.+.|.+|+|..+... .+...| ..+|+..+.|.|.+.+.-..
T Consensus 31 ~~F~V~~~~a----G~~~l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 89 (108)
T 2dj4_A 31 QSFTVDSSKA----GLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYAD 89 (108)
T ss_dssp EEEEEECTTT----CSCCEEEEEECSSSCEECCCCEECSSSEEEEEECCSSCEEEEEEEEESS
T ss_pred EEEEEEECCC----CCceEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCeeEEEEEEECC
Confidence 3555554332 24689999999999654332 112234 45677888899999887543
No 13
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=83.96 E-value=4.5 Score=25.89 Aligned_cols=53 Identities=26% Similarity=0.468 Sum_probs=34.8
Q ss_pred EEEEEeCCCCCCCCCCceEEEEECCCCCeeecccceeee--eEEEEcccccceeEeEEcC
Q 040712 17 SFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 17 ~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
.|.|...+. ....+.+.|.+|++..+.-.+ ...| ..+|+..+.|.|.+.+.-.
T Consensus 31 ~F~v~t~da----g~g~l~v~v~gp~~~~~~v~d-~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (105)
T 2dic_A 31 VFTVVTRGA----GIGGLGITVEGPSESKINCRD-NKDGSCSAEYIPFAPGDYDVNITYG 85 (105)
T ss_dssp EEEEECTTT----CSSCEEEEEESSSCCCCEEEE-CSSSCEEEEECCSSCEEEEEEEEET
T ss_pred EEEEEEccC----CCCceEEEEECCCCCeEEEEE-CCCCeEEEEEEeCCCeEEEEEEEEC
Confidence 455555432 245799999999885442222 2334 5677888899999998744
No 14
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=83.82 E-value=5.3 Score=24.93 Aligned_cols=44 Identities=14% Similarity=0.112 Sum_probs=28.4
Q ss_pred CCceEEEEECCCCCeeec---ccceeeeeEEEEcccccceeEeEEcC
Q 040712 31 DEGVELTVTGPSDERVRD---FDRRSTATFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~---~~~~~~g~f~f~~~~~G~y~~Cf~n~ 74 (179)
...+.+.|.+|+|..+.. ..+...-..+|+..+.|.|.+.+.-.
T Consensus 36 ~~~l~v~v~~p~~~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 82 (96)
T 1v05_A 36 TNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWG 82 (96)
T ss_dssp SCCEEEEEECSSSCCSEEEEEECSTTEEEEEEECSSCEEEEEEEEET
T ss_pred CCcEEEEEECCCCCeeEEEEEeCCCCEEEEEEEeCCCEEEEEEEEEC
Confidence 457999999999853211 11111334567778888888888744
No 15
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.51 E-value=7.1 Score=25.33 Aligned_cols=53 Identities=21% Similarity=0.435 Sum_probs=35.1
Q ss_pred EEEEEeCCCCCCCCCCceEEEEECCCCCeeecccceeee--eEEEEcccccceeEeEEcC
Q 040712 17 SFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 17 ~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
.|.|...+. +...+.+.|.+|++..+-- .+...| ..+|+..+.|.|.+.+.-.
T Consensus 41 ~F~v~t~da----g~~~l~v~v~~p~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~ 95 (115)
T 2eea_A 41 TFTIVTEDA----GEGGLDLAIEGPSKAEISC-IDNKDGTCTVTYLPTLPGDYSILVKYN 95 (115)
T ss_dssp EEEEECSSC----CSSCEEEEEESSSCCEECC-BCCSSSEEEEEEECSSCSCEEEEEEES
T ss_pred EEEEEcccC----CCCceEEEEECCCCceEEE-EECCCCEEEEEEEeCCCeeEEEEEEEC
Confidence 455554332 2468999999999854422 223344 5678888999999988744
No 16
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=83.19 E-value=4 Score=27.09 Aligned_cols=45 Identities=18% Similarity=0.141 Sum_probs=31.5
Q ss_pred CCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcCC
Q 040712 31 DEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~~ 75 (179)
...+.+.|.+|+|..+... .+...| ..+|+..+.|.|.+++.-..
T Consensus 42 ~~~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~g 89 (124)
T 2dmb_A 42 KGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGG 89 (124)
T ss_dssp SCCEEEEEECTTSCBCCCEEEECTTSCEEEEEECSSCEEEEEEEEESS
T ss_pred CCcEEEEEECCCCCEEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEECC
Confidence 4689999999998654332 111233 56688889999999998543
No 17
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=83.06 E-value=5.8 Score=24.86 Aligned_cols=53 Identities=19% Similarity=0.395 Sum_probs=34.1
Q ss_pred EEEEEeCCCCCCCCCCceEEEEECCCCCeeecccceeee--eEEEEcccccceeEeEEcC
Q 040712 17 SFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 17 ~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
.|.|...+. ....+.+.|.+|++..+.-. +...| ..+|+..+.|.|.+.+.-.
T Consensus 26 ~F~v~t~da----g~~~l~v~v~~p~~~~~~v~-d~~dGty~v~Y~p~~~G~y~i~V~~~ 80 (97)
T 2bp3_A 26 TFTVNTKDA----GEGGLSLAIEGPSKAEISCT-DNQDGTCSVSYLPVLPGDYSILVKYN 80 (97)
T ss_dssp EEEEECTTC----CSEEEEEEEEESSCCEEEEE-ECSSSEEEEEEECSSCEEEEEEEEET
T ss_pred EEEEEECCC----CCCcEEEEEECCCCCEEEEE-ECCCCEEEEEEEeCCCCcEEEEEEEC
Confidence 455554332 25689999999988544222 12234 5677888889999988743
No 18
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=81.88 E-value=6.6 Score=26.64 Aligned_cols=43 Identities=14% Similarity=0.271 Sum_probs=29.3
Q ss_pred CCceEEEEECCCCCeeecccceee-eeEEEEcccccceeEeEEcC
Q 040712 31 DEGVELTVTGPSDERVRDFDRRST-ATFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~~~~~~-g~f~f~~~~~G~y~~Cf~n~ 74 (179)
...+.+.|.+|++..+--.+ ..+ -..+|+..+.|.|.+.+.-.
T Consensus 75 ~g~l~v~I~gPs~~~~~~~d-~~dGy~V~YtP~~~G~y~I~Vk~~ 118 (138)
T 2nqc_A 75 SGALSVTIDGPSKVQLDCRE-CPEGHVVTYTPMAPGNYLIAIKYG 118 (138)
T ss_dssp SCCEEEEEESSSCCEEEEEE-ETTEEEEEEECCSCEEEEEEEEES
T ss_pred CCcEEEEEECCCCCeeeEEE-CCCcEEEEEEcCCCEEEEEEEEEC
Confidence 45799999999986443221 122 45667888889998888733
No 19
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=81.41 E-value=5 Score=25.00 Aligned_cols=44 Identities=20% Similarity=0.391 Sum_probs=29.3
Q ss_pred CCceEEEEECCCCCeeeccc-ceeeeeEEEEcccccceeEeEEcC
Q 040712 31 DEGVELTVTGPSDERVRDFD-RRSTATFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~~-~~~~g~f~f~~~~~G~y~~Cf~n~ 74 (179)
...+.+.|.+|++..+.-.+ +.-.=..+|+..+.|.|.+.+.-.
T Consensus 33 ~~~~~v~v~gp~~~~~~v~d~~dGty~v~Y~p~~~G~y~I~V~~~ 77 (94)
T 2w0p_A 33 AGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFN 77 (94)
T ss_dssp SCCEEEEEEESSCCEEEEEECTTSCEEEEEECSSCEEEEEEEEET
T ss_pred CCcEEEEEECCCCCeEEEEECCCCEEEEEEEECCCceEEEEEEEC
Confidence 45789999999985442221 111335677888889999888743
No 20
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.73 E-value=3.7 Score=26.93 Aligned_cols=55 Identities=15% Similarity=0.265 Sum_probs=34.6
Q ss_pred EEEEEeCCCCCCCCCCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcCC
Q 040712 17 SFVVVKADNPWHYSDEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 17 ~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~~ 75 (179)
.|.|...+. ....+.+.|.+|+|..+... .+...| ..+|+..+.|.|.+.+.-..
T Consensus 43 ~F~V~~~da----G~~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 100 (119)
T 2e9j_A 43 DFAIDARDA----GEGLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGG 100 (119)
T ss_dssp EEEEEESSC----CCCCEECCEECTTCCCCCEEEEECCSSEEEEEECCCSCSEEEECCEESS
T ss_pred EEEEEECCC----CCCeEEEEEECCCCCEEEEEEEECCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 455554332 24689999999998644322 112234 45677788899998887543
No 21
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=78.21 E-value=5.8 Score=31.27 Aligned_cols=55 Identities=18% Similarity=0.240 Sum_probs=36.0
Q ss_pred EEEEEEeCCCCCCCCCCceEEEEECCCCCeeecc---cceeee--eEEEEcccccceeEeEEcC
Q 040712 16 CSFVVVKADNPWHYSDEGVELTVTGPSDERVRDF---DRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 16 ~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~---~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
..|.|...++ +...+.+.|.+|+|..+--. .+...| ..+|++.+.|.|.+-+.-.
T Consensus 275 ~~F~Vdt~~A----G~g~l~v~V~~P~G~~~~~~v~~~~~~~gty~v~y~P~~~G~~~I~V~~~ 334 (347)
T 4b7l_A 275 AKFTVDTISA----GQGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYLPKVTGLHKVTVLFA 334 (347)
T ss_dssp EEEEEECTTT----CSCCEEEEEECTTSCEEECEEEESSTTCSEEEEEECCCSSSEEEEEEEET
T ss_pred EEEEEEeCCC----CCCceEEEEECCCCCeecCEEEEEcCCCCEEEEEEEECCCEeEEEEEEEC
Confidence 3555554332 25689999999999755321 122234 4578888999999888644
No 22
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=77.68 E-value=12 Score=24.37 Aligned_cols=43 Identities=21% Similarity=0.373 Sum_probs=30.4
Q ss_pred CCceEEEEECCCCCeeecccceeee--eEEEEcccccceeEeEEcC
Q 040712 31 DEGVELTVTGPSDERVRDFDRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
...+.+.|.+|++..+.-. +...| ..+|+..+.|.|.+.+.-.
T Consensus 48 ~~~l~v~v~~p~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~ 92 (119)
T 2k9u_A 48 AGGLSIAVEGPSKAEIAFE-DRKDGSCGVSYVVQEPGDYEVSIKFN 92 (119)
T ss_dssp SEEEEEEEESSSCCEEEEE-CCSSSEEEEEEECCSSEEEEEEEEET
T ss_pred CCcEEEEEeCCCCCeEEEE-ECCCCEEEEEEEECCCceEEEEEEEC
Confidence 5689999999998433222 22344 5678888999999999844
No 23
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.98 E-value=9.5 Score=25.26 Aligned_cols=54 Identities=13% Similarity=0.249 Sum_probs=34.4
Q ss_pred EEEEEeCCCCCCCCCCceEEEEECCCCCeeecccceee-eeEEEEcccccceeEeEEcCC
Q 040712 17 SFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRRST-ATFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 17 ~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~~~-g~f~f~~~~~G~y~~Cf~n~~ 75 (179)
.|.|...+. ....+.+.|.+|++..+--.+. .. -..+|+..+.|.|.+.+.-..
T Consensus 41 ~F~v~t~da----G~~~l~v~i~gp~~~~~~~~d~-~dGy~V~Y~P~~~G~y~I~V~~~g 95 (125)
T 2eec_A 41 EFFINTTRA----GPGTLSVTIEGPSKVKMDCQET-PEGYKVMYTPMAPGNYLISVKYGG 95 (125)
T ss_dssp EEEEECTTT----CSCCEEEEEESSSCCCCEEEEC-SSSEEEEECCSSCEEEEEEEEESS
T ss_pred EEEEEEcCC----CCCcEEEEEECCCCCcceeEEC-CCCEEEEEEcCCCeEEEEEEEECC
Confidence 455554332 2468999999999854422211 23 355677888999998887433
No 24
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=76.86 E-value=7.2 Score=26.30 Aligned_cols=56 Identities=20% Similarity=0.278 Sum_probs=38.0
Q ss_pred cEEEEEEEEEeCCCCCCCCCCceEEEEECCCCCeeeccc--ceeeeeEEEEcc---------cccceeEeEEcC
Q 040712 12 DTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFD--RRSTATFEFVAY---------KKGLYKFCFTNK 74 (179)
Q Consensus 12 ~~i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~--~~~~g~f~f~~~---------~~G~y~~Cf~n~ 74 (179)
..+.+.|.+.... ..+.+.|+|.+|+++++.. ..+.|.+.|+-. .+|.|++-+...
T Consensus 24 ~~~~~~~~l~~~a-------~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a~ 90 (138)
T 3osv_A 24 DTFKASLNLPVSS-------SNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTS 90 (138)
T ss_dssp SCEEEEEEESBCE-------EEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred CeEEEEEECCCCC-------cEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEEE
Confidence 3456666665432 3799999999999998853 234565555432 368999988755
No 25
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=76.53 E-value=1.9 Score=28.37 Aligned_cols=45 Identities=11% Similarity=0.162 Sum_probs=32.0
Q ss_pred CCceEEEEECCCCCeeecc-ccee--eeeEEEEcccccceeEeEEcCC
Q 040712 31 DEGVELTVTGPSDERVRDF-DRRS--TATFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~-~~~~--~g~f~f~~~~~G~y~~Cf~n~~ 75 (179)
...+.+.|.+|+|..+-.. .... .-..+|+..+.|.|.+.+.-..
T Consensus 44 ~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~e~G~h~v~V~~~g 91 (116)
T 2dmc_A 44 LSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNG 91 (116)
T ss_dssp STTBCCEEECTTSCBCCEEEEEETTTEEEEEECCCSCEEEEEECBBSS
T ss_pred CCCEEEEEECCCCCEEeeEEEeCCCCeEEEEEEeCCCeeEEEEEEECC
Confidence 4689999999999754332 1112 3457789999999999998543
No 26
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=75.57 E-value=13 Score=26.44 Aligned_cols=53 Identities=19% Similarity=0.395 Sum_probs=35.0
Q ss_pred EEEEEeCCCCCCCCCCceEEEEECCCCCeeecccceeee--eEEEEcccccceeEeEEcC
Q 040712 17 SFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 17 ~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
.|.|...+. ....+.+.|.+|++..+.-. +...| ..+|+..+.|.|.+++.-.
T Consensus 117 ~F~V~t~da----g~g~l~v~I~gp~~~~~~~~-d~~dGty~v~Y~p~~~G~y~i~V~~~ 171 (188)
T 2k7p_A 117 TFTVNTKDA----GEGGLSLAIEGPSKAEISCT-DNQDGTCSVSYLPVLPGDYSILVKYN 171 (188)
T ss_dssp EEEEECTTC----CSSCEEEEEECSSCCEEEEE-ECTTSEEEEEEECCSSEEEEEEEEET
T ss_pred EEEEEeCCC----CCCCeEEEEeCCCCCeEEEE-ECCCCEEEEEEEeCCCEEEEEEEEEC
Confidence 455554332 24679999999988544222 22344 6788888999999999844
No 27
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=74.95 E-value=12 Score=24.06 Aligned_cols=45 Identities=11% Similarity=0.246 Sum_probs=30.7
Q ss_pred CCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcCC
Q 040712 31 DEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~~ 75 (179)
...+.+.|.+|+|..+... .+...| ..+|+..+.|.|.+.+.-..
T Consensus 41 ~~~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 88 (113)
T 2dia_A 41 PGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGG 88 (113)
T ss_dssp SCCEEEEEEETTTEECEEEEEECTTSEEEEEEECSSCEEEEEEEEETT
T ss_pred CccEEEEEECCCCCEeeEEEEECCCCEEEEEEEeCCCccEEEEEEECC
Confidence 4589999999988544332 112234 56678888999999987543
No 28
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=74.88 E-value=15 Score=24.46 Aligned_cols=53 Identities=19% Similarity=0.354 Sum_probs=34.0
Q ss_pred EEEEEeCCCCCCCCCCceEEEEECCCCCeeecccceeee--eEEEEcccccceeEeEEcC
Q 040712 17 SFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 17 ~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
.|.|...+. ....+.+.|.+|++..+.-. +...| ..+|+..+.|.|.+.+.-.
T Consensus 51 ~F~V~t~da----g~~~l~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~ 105 (131)
T 2di9_A 51 EFTIDTKGA----GTGGLGLTVEGPCEAKIECS-DNGDGTCSVSYLPTKPGEYFVNILFE 105 (131)
T ss_dssp EEEEECTTT----CSSCEEEEECSSSCCEEEEE-ECSSSEEEEEEECSSSSEEEEEEEES
T ss_pred EEEEEEcCC----CCCeeEEEEEecCCceEEEE-ECCCCEEEEEEEeCCCeeEEEEEEEC
Confidence 455554332 24679999999988543222 12234 5667888899999998744
No 29
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=74.73 E-value=4.7 Score=26.25 Aligned_cols=56 Identities=18% Similarity=0.184 Sum_probs=38.4
Q ss_pred CcEEEEEEEEEeCCCCCCCCCCceEEEEE-CCCCCeeecccceee--eeEEEE--cccccceeEeEEcCC
Q 040712 11 GDTLHCSFVVVKADNPWHYSDEGVELTVT-GPSDERVRDFDRRST--ATFEFV--AYKKGLYKFCFTNKS 75 (179)
Q Consensus 11 ~~~i~~~y~v~~~~~~~~~~~~~i~~~v~-~P~g~~v~~~~~~~~--g~f~f~--~~~~G~y~~Cf~n~~ 75 (179)
+..|.+.|. . .-.++.++|+ +.+|+++|++.-... ..+.+. ...+|.|.+=+.+..
T Consensus 37 ~~~L~I~F~----~-----~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~~ 97 (108)
T 3d33_A 37 GYLLTLKNA----S-----PDRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGTP 97 (108)
T ss_dssp TTEEEEEES----S-----CCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEES
T ss_pred CCEEEEEEC----C-----cCCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeCC
Confidence 566767763 1 1358999999 889999998743222 334444 457899999998873
No 30
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=74.60 E-value=3.1 Score=33.94 Aligned_cols=45 Identities=18% Similarity=0.330 Sum_probs=37.7
Q ss_pred CCceEEEEECCCCCeeecccceeeeeEEEEcccccceeEeEEcCC
Q 040712 31 DEGVELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~~~~~~g~f~f~~~~~G~y~~Cf~n~~ 75 (179)
-.++.|.+++|+|.++....-...|.|.|.-...|.|.+-|..+.
T Consensus 329 l~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P~ 373 (429)
T 3irp_X 329 AAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMPE 373 (429)
T ss_dssp CTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCCT
T ss_pred cCCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECCC
Confidence 467999999999998876554568999999999999999997653
No 31
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=72.49 E-value=12 Score=25.19 Aligned_cols=43 Identities=16% Similarity=0.216 Sum_probs=31.4
Q ss_pred CceEEEEECCCCCeeeccc--ceeeeeEEEEcc---------cccceeEeEEcC
Q 040712 32 EGVELTVTGPSDERVRDFD--RRSTATFEFVAY---------KKGLYKFCFTNK 74 (179)
Q Consensus 32 ~~i~~~v~~P~g~~v~~~~--~~~~g~f~f~~~---------~~G~y~~Cf~n~ 74 (179)
..+.+.|+|.+|+++.+-. ..+.|.+.|.-. .+|.|++.+...
T Consensus 39 ~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a~ 92 (138)
T 3c12_A 39 GFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQT 92 (138)
T ss_dssp EEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred CEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEEE
Confidence 4799999999999998753 234566666532 358999999754
No 32
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=72.46 E-value=5.3 Score=28.87 Aligned_cols=45 Identities=13% Similarity=0.223 Sum_probs=31.5
Q ss_pred CCCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcCC
Q 040712 30 SDEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 30 ~~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~~ 75 (179)
....+.+.|.+|+| .+... .+...| ..+|+..+.|.|.+++.-..
T Consensus 133 G~~~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g 180 (212)
T 1qfh_A 133 GGDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNG 180 (212)
T ss_dssp CCCCEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEETT
T ss_pred CCCcEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECC
Confidence 35689999999998 33211 122345 57788889999999998554
No 33
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=72.36 E-value=18 Score=23.89 Aligned_cols=64 Identities=6% Similarity=0.106 Sum_probs=39.8
Q ss_pred CCcEEEEEEEEEeCCCCC----CCCCCceEEEEECCCCCeeecccce-----eeeeEEEEcccccceeEeEEc
Q 040712 10 EGDTLHCSFVVVKADNPW----HYSDEGVELTVTGPSDERVRDFDRR-----STATFEFVAYKKGLYKFCFTN 73 (179)
Q Consensus 10 ~~~~i~~~y~v~~~~~~~----~~~~~~i~~~v~~P~g~~v~~~~~~-----~~g~f~f~~~~~G~y~~Cf~n 73 (179)
+|..+.+.+.|...++.. -++....++.|+|++|+.+|..... .-+...+.+.+.=.|+.=+++
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKE 88 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESS
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCC
Confidence 466788888888654321 1456788999999999999953221 134444444444455555553
No 34
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=71.17 E-value=9.4 Score=24.62 Aligned_cols=53 Identities=23% Similarity=0.446 Sum_probs=34.5
Q ss_pred EEEEEeCCCCCCCCCCceEEEEECCCCCeeecccceeee--eEEEEcccccceeEeEEcC
Q 040712 17 SFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 17 ~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
.|.|...+. ....+.+.|.+|++..+-- .+...| ..+|+..+.|.|.+.+.-.
T Consensus 31 ~F~V~t~da----g~~~l~v~v~gp~~~~~~v-~d~~dGty~V~Y~p~~~G~y~I~V~~~ 85 (111)
T 2d7o_A 31 TFTIVTKDA----GEGGLSLAVEGPSKAEITC-KDNKDGTCTVSYLPTAPGDYSIIVRFD 85 (111)
T ss_dssp EEEEECTTT----CSSCBCCEEESSSCCCBCC-CCCSSSEEEEEECCSSCEEEEEECBBS
T ss_pred EEEEEECCC----CCCcEEEEEECCCCceEEE-EECCCCEEEEEEEeCCCeEEEEEEEEC
Confidence 455554332 2457889999998754422 222345 5668888999999999744
No 35
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=70.91 E-value=6.3 Score=30.23 Aligned_cols=44 Identities=14% Similarity=0.225 Sum_probs=31.7
Q ss_pred CCceEEEEECCCCCeeecc-cceeeee--EEEEcccccceeEeEEcCC
Q 040712 31 DEGVELTVTGPSDERVRDF-DRRSTAT--FEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~-~~~~~g~--f~f~~~~~G~y~~Cf~n~~ 75 (179)
...+.+.|.+|+| .+... .....|. .+|+..+.|.|.+++.-..
T Consensus 233 ~~~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~g 279 (311)
T 1wlh_A 233 GDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNG 279 (311)
T ss_dssp CSCEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEETT
T ss_pred CCcEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEECC
Confidence 4579999999999 44322 1223454 7888899999999998554
No 36
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=70.50 E-value=12 Score=20.94 Aligned_cols=45 Identities=4% Similarity=-0.056 Sum_probs=28.1
Q ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhHHH
Q 040712 100 EHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRA 144 (179)
Q Consensus 100 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv 144 (179)
..++.|...++.|...+..|..+...++.--..-.+-+...|.|+
T Consensus 4 aki~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~Rl 48 (52)
T 1jcd_A 4 AKADQASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRA 48 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 346667777777877777777777666653334444444555554
No 37
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=70.06 E-value=12 Score=25.10 Aligned_cols=61 Identities=13% Similarity=0.210 Sum_probs=44.3
Q ss_pred CCcEEEEEEEEEeCCCCCCCCCCceEEEEECCCCCeeecccce------------------eeeeEEEEcccccceeEeE
Q 040712 10 EGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRR------------------STATFEFVAYKKGLYKFCF 71 (179)
Q Consensus 10 ~~~~i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~------------------~~g~f~f~~~~~G~y~~Cf 71 (179)
.|..+.+.|++..+. +....+.+.+++|++|.+.+.= ....|.......|+|.+-+
T Consensus 13 ~~~~Mag~FEi~~~~------~G~~rfrLka~NGeiI~sSe~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~~f~L 86 (130)
T 2k8e_A 13 QGVIMAGWFELSKSS------DNQFRFVLKAGNGETILTSELYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNL 86 (130)
T ss_dssp -CCCCCCEEEEEECT------TCCEEEEEECTTSCEEEECCCBSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEEEEEE
T ss_pred ccceeeeeEEEEEcC------CCCEEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHHhhccccchheeeeccCCCEEEEE
Confidence 466777899998875 3579999999999999764310 2356777777788888877
Q ss_pred EcCCC
Q 040712 72 TNKSP 76 (179)
Q Consensus 72 ~n~~s 76 (179)
.....
T Consensus 87 ka~Ng 91 (130)
T 2k8e_A 87 KAANH 91 (130)
T ss_dssp ECTTS
T ss_pred EeCCC
Confidence 76644
No 38
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=70.04 E-value=19 Score=23.14 Aligned_cols=43 Identities=19% Similarity=0.298 Sum_probs=29.8
Q ss_pred CCceEEEEECCCCCeeecccceeee--eEEEEcccccceeEeEEcC
Q 040712 31 DEGVELTVTGPSDERVRDFDRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
...+.+.|.+|++..+.-. +...| ..+|+..+.|.|.+.+.-.
T Consensus 41 ~g~l~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (111)
T 2di8_A 41 YGGISLAVEGPSKVDIQTE-DLEDGTCKVSYFPTVPGVYIVSTKFA 85 (111)
T ss_dssp BCCEEEEEESSSCCCEECC-BCTTSCEEEEECCCSCSEEEEEEEES
T ss_pred CCceEEEEEcCCCceEEEE-ECCCCEEEEEEEeCCCeEEEEEEEEC
Confidence 3578999999988544222 22344 5677888899999988744
No 39
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=68.82 E-value=7.2 Score=27.71 Aligned_cols=44 Identities=14% Similarity=0.160 Sum_probs=31.5
Q ss_pred CCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcC
Q 040712 31 DEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
...+.+.|.+|+|+...-. .+...| ..+|+..+.|.|++.+.-.
T Consensus 33 ~~~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~ 79 (188)
T 2k7p_A 33 KGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYD 79 (188)
T ss_dssp SSCEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEET
T ss_pred CceEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEEC
Confidence 3579999999999865321 112234 5677888999999999755
No 40
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.59 E-value=16 Score=23.23 Aligned_cols=45 Identities=16% Similarity=0.303 Sum_probs=28.0
Q ss_pred CCceEEEEECCCC--Ceeec-ccceeee--eEEEEcccccceeEeEEcCC
Q 040712 31 DEGVELTVTGPSD--ERVRD-FDRRSTA--TFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 31 ~~~i~~~v~~P~g--~~v~~-~~~~~~g--~f~f~~~~~G~y~~Cf~n~~ 75 (179)
...+.+.|.+|++ ..+.- -.+...| ..+|+..+.|.|.+++.-..
T Consensus 48 g~~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~~g 97 (113)
T 2ds4_A 48 GDNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKE 97 (113)
T ss_dssp CCCEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEEESS
T ss_pred CceEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEECC
Confidence 3478999999986 22211 1122234 45677788888888887543
No 41
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=65.25 E-value=50 Score=27.74 Aligned_cols=63 Identities=17% Similarity=0.266 Sum_probs=39.5
Q ss_pred CCcEEEEEEEEEeCCCCCCCCCCceEEEEECCCCCeeecccce-eeeeEE--EEc---ccccceeEeEEcC
Q 040712 10 EGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRR-STATFE--FVA---YKKGLYKFCFTNK 74 (179)
Q Consensus 10 ~~~~i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~-~~g~f~--f~~---~~~G~y~~Cf~n~ 74 (179)
+|+.+.+..-+.+.+ .. +....+.+.|.||+|+.+.+..-. ..|-|+ |.. ...|.|++-+...
T Consensus 133 PGqtV~~r~i~~d~~-~~-p~~~~~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~ 201 (656)
T 4fxk_A 133 PGQRVRYRVFALDQK-MR-PSTDTITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFS 201 (656)
T ss_dssp TTCEEEEEEEEECSS-SS-BCCCCEEEEEECTTCCEEEEEEECCTTSEEEEEEECCTTCCSEEEEEEEEES
T ss_pred CCCEEEEEEEEECCc-cC-cCcccceEEEECCCCcEEeeeEEecCCceEEEEecCCCCCCCcCEEEEEEEc
Confidence 577777766665433 21 234578999999999988764211 134333 332 2459999998743
No 42
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=64.67 E-value=5.6 Score=26.33 Aligned_cols=45 Identities=18% Similarity=0.360 Sum_probs=30.7
Q ss_pred CCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcCC
Q 040712 31 DEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~~ 75 (179)
...+.+.|.+|+|..+.-. .+...| ..+|+..+.|.|++.+.-..
T Consensus 56 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~~~i~V~~~g 103 (128)
T 2dib_A 56 GDHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDD 103 (128)
T ss_dssp CSCCCEECCCSSSCCCCCEEEECSSSEEEEEECCSSCSEEEEEEBSSS
T ss_pred CccEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCEeEEEEEEECC
Confidence 4578999999998644321 111233 46678889999999998543
No 43
>1qle_D Cytochrome AA3, ccytochrome C oxidase; oxidoreductase/immune system, complex (oxidoreductase/antibody), electron transport; HET: HEA PC1; 3.0A {Paracoccus denitrificans} SCOP: f.23.8.1
Probab=63.34 E-value=15 Score=19.59 Aligned_cols=28 Identities=14% Similarity=0.169 Sum_probs=18.0
Q ss_pred hHHHHHhHhHHHHHHHHHHHHHHHHHHH
Q 040712 133 QSIVNKTMSRRAIYKAMLGSFFLITASF 160 (179)
Q Consensus 133 ~~~~~es~~~rv~~~si~~i~vli~~~~ 160 (179)
|.++-+.--..+.|.+++-+++++.+++
T Consensus 13 hE~Ty~gFi~~~k~gt~~~~~~ll~mai 40 (43)
T 1qle_D 13 QQATFAGFIKGATWVSILSIAVLVFLAL 40 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555567777777777777765
No 44
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=63.31 E-value=11 Score=26.75 Aligned_cols=43 Identities=16% Similarity=0.280 Sum_probs=29.3
Q ss_pred CCceEEEEECCCCCeeecccceeee--eEEEEcccccceeEeEEcC
Q 040712 31 DEGVELTVTGPSDERVRDFDRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
...+.+.|.+|++..+.-. +...| ..+|++.+.|.|.+++.-.
T Consensus 127 ~g~l~v~V~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~i~V~~~ 171 (191)
T 2k7q_A 127 YGGLSLSIEGPSKVDINTE-DLEDGTCRVTYCPTEPGNYIINIKFA 171 (191)
T ss_dssp SEEEEEEEEESSCEEEEEE-ECTTSCEEEEEEESSCEEEEEEEEET
T ss_pred CCceEEEEECCCCceEEEE-ECCCCEEEEEEEeCCCceEEEEEEEC
Confidence 4578888999987543221 22234 6778888889999988754
No 45
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=62.98 E-value=11 Score=26.67 Aligned_cols=46 Identities=17% Similarity=0.133 Sum_probs=32.2
Q ss_pred CCCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcCC
Q 040712 30 SDEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNKS 75 (179)
Q Consensus 30 ~~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~~ 75 (179)
+...+.+.|.+|+|+.+--. .....| ..+|+..+.|.|.+-+....
T Consensus 29 ~~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~g 77 (191)
T 2k7q_A 29 DLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNG 77 (191)
T ss_dssp CSSSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEETT
T ss_pred CCCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEECC
Confidence 35689999999999755322 111233 56788899999998887543
No 46
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=61.23 E-value=75 Score=26.85 Aligned_cols=63 Identities=13% Similarity=0.130 Sum_probs=40.5
Q ss_pred CCcEEEEEEEEEeCCCCCCCCCCceEEEEECCCCCeeecccce---eeeeE--EEEcc---cccceeEeEEcC
Q 040712 10 EGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRR---STATF--EFVAY---KKGLYKFCFTNK 74 (179)
Q Consensus 10 ~~~~i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~---~~g~f--~f~~~---~~G~y~~Cf~n~ 74 (179)
+|+.|.+..-+.+.. ..+ ....+.+.|.||+|+.+.+..-. ..|-+ +|..+ ..|.|++-+...
T Consensus 119 PGqtV~~r~i~~d~~-~~p-~~~~v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 189 (645)
T 2hr0_A 119 PGSTVLYRIFTVNHK-LLP-VGRTVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYE 189 (645)
T ss_dssp TTSEEEEEEEEECTT-SCB-CCCEEEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEET
T ss_pred CCCEEEEEEEEECCC-Ccc-cCceEEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEEC
Confidence 578888777776543 222 23578999999999988763211 22333 33332 469999999753
No 47
>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=60.80 E-value=21 Score=20.47 Aligned_cols=47 Identities=6% Similarity=0.042 Sum_probs=38.0
Q ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhHHHH
Q 040712 99 DEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAI 145 (179)
Q Consensus 99 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 145 (179)
+++++.|...+.+|...-..|.+|.+.....-...-..++++..++-
T Consensus 8 D~~Ld~L~~~v~~lk~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~l~ 54 (65)
T 1gl2_D 8 DAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLR 54 (65)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46678889999999999999999998888777777777777776653
No 48
>1m56_D Cytochrome C oxidase; membrane protein, oxidoreductase; HET: HEA PEH; 2.30A {Rhodobacter sphaeroides} SCOP: f.23.8.1 PDB: 1m57_D*
Probab=59.78 E-value=20 Score=19.86 Aligned_cols=29 Identities=17% Similarity=0.062 Sum_probs=18.3
Q ss_pred hHHHHHhHhHHHHHHHHHHHHHHHHHHHH
Q 040712 133 QSIVNKTMSRRAIYKAMLGSFFLITASFL 161 (179)
Q Consensus 133 ~~~~~es~~~rv~~~si~~i~vli~~~~~ 161 (179)
|.++-+.--+.+.|.+++-+++++.++++
T Consensus 21 he~Ty~gFi~~~k~gt~~~~~~ll~laif 49 (51)
T 1m56_D 21 QEKTFAGFVRMVTWAAVVIVAALIFLALA 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444555555667777777777777654
No 49
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=59.72 E-value=16 Score=23.50 Aligned_cols=42 Identities=14% Similarity=0.242 Sum_probs=27.6
Q ss_pred ceEEEEECCCCCeeecc---cceeeeeEEEEcccccceeEeEEcC
Q 040712 33 GVELTVTGPSDERVRDF---DRRSTATFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 33 ~i~~~v~~P~g~~v~~~---~~~~~g~f~f~~~~~G~y~~Cf~n~ 74 (179)
...+.|..|++...... .......++.+.+.+|.|++=+...
T Consensus 48 ~~~~~i~~pg~~~~~~~~~~~~~~~~~~~~~LP~sG~Y~I~V~~~ 92 (111)
T 4g9s_B 48 GADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYELRVLQT 92 (111)
T ss_dssp TCEEEEECTTCSSCEECSTTCTTCCTTSCEECSSSEEEEEEEECC
T ss_pred CccEEEECCCCccccccccccccCCceEEEEecCCccEEEEEEec
Confidence 35566777776543321 1223456788899999999999754
No 50
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=58.63 E-value=33 Score=22.01 Aligned_cols=20 Identities=20% Similarity=0.394 Sum_probs=11.0
Q ss_pred cCcccHHHHHHHHHHHHHHH
Q 040712 100 EHINPILDQIAKLEEALYDI 119 (179)
Q Consensus 100 ~~~~~l~~~l~~l~~~l~~i 119 (179)
+.+..++..+..|.+.+..+
T Consensus 21 ~eI~~Ie~~I~eL~~iF~dl 40 (109)
T 3hd7_B 21 SEIIKLENSIRELHDMFMDM 40 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34555666666665555544
No 51
>2nps_D Syntaxin-6; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Homo sapiens}
Probab=58.35 E-value=28 Score=21.07 Aligned_cols=47 Identities=17% Similarity=0.020 Sum_probs=38.8
Q ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhHHHH
Q 040712 99 DEHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAI 145 (179)
Q Consensus 99 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 145 (179)
+++++.|...+.+|.+.-..|.+|.+.....-...-..++++..++-
T Consensus 18 D~~Ld~L~~~v~~LK~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~L~ 64 (82)
T 2nps_D 18 DEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLD 64 (82)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999998888777777777777776654
No 52
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=54.67 E-value=39 Score=21.59 Aligned_cols=54 Identities=22% Similarity=0.233 Sum_probs=35.6
Q ss_pred EEEEEEEEEeCCCCCCCCCCceEEEEECC-CCCeeecccceeeeeEEE--EcccccceeEeEEcCC
Q 040712 13 TLHCSFVVVKADNPWHYSDEGVELTVTGP-SDERVRDFDRRSTATFEF--VAYKKGLYKFCFTNKS 75 (179)
Q Consensus 13 ~i~~~y~v~~~~~~~~~~~~~i~~~v~~P-~g~~v~~~~~~~~g~f~f--~~~~~G~y~~Cf~n~~ 75 (179)
.+.+.|. +. -..+.++|.+. +|+.+|+.....-...+. ....+|+|.+=+.-..
T Consensus 35 vlsV~F~----~~-----~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI~~~~ 91 (101)
T 3sd2_A 35 ILNVSFG----RA-----KDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHIILND 91 (101)
T ss_dssp EEEEEES----SC-----CSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEEEETT
T ss_pred EEEEEec----cC-----CCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEEEeCC
Confidence 6666664 21 35799999986 799999973322223344 4456899988876554
No 53
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=53.37 E-value=12 Score=28.38 Aligned_cols=44 Identities=18% Similarity=0.159 Sum_probs=29.6
Q ss_pred CCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcC
Q 040712 31 DEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
...+.+.|.+|+|..+--. .....| ..+|+..+.|.|++|+.-.
T Consensus 130 ~~~l~~~V~~psG~~~~~~v~~~~~g~y~v~f~P~e~G~h~v~V~~~ 176 (288)
T 2j3s_A 130 IQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYK 176 (288)
T ss_dssp CCCEEEEEECTTCCEEEEBC-------CCCBCCCCSCEEEEEEEEET
T ss_pred cCceEEEEECCCCCeeeeEEEeCCCCEEEEEEecccceeeEEEEEEC
Confidence 3578999999999866432 112233 4667888999999998744
No 54
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=53.15 E-value=46 Score=28.30 Aligned_cols=63 Identities=8% Similarity=0.084 Sum_probs=34.9
Q ss_pred CCcEEEEEEEEEeCCCCCCCCCCceEEEEECCCCCeeecccce--eeeeEEEEc-ccccceeEeEEcC
Q 040712 10 EGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRR--STATFEFVA-YKKGLYKFCFTNK 74 (179)
Q Consensus 10 ~~~~i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~--~~g~f~f~~-~~~G~y~~Cf~n~ 74 (179)
+|+.+.+..-+.+.+ . .+.+..+.+.|.||+|+.+.+..-. -++.|.... ...|.|++.+...
T Consensus 117 PGqtV~~r~i~~d~~-~-~p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~ 182 (627)
T 3hrz_A 117 PGSPVLYRVFSMDHN-T-SKMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 182 (627)
T ss_dssp TTCEECEEEEESCC---------CEEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEET
T ss_pred CCCEEEEEEEEECCC-C-cccCccEEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEEC
Confidence 466666555444322 1 1224679999999999998853211 123333332 2469999998743
No 55
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=52.32 E-value=87 Score=29.07 Aligned_cols=64 Identities=14% Similarity=0.280 Sum_probs=40.9
Q ss_pred CCcEEEEEEEEEeCCCCCCCC-CCceEEEEECCCCCeeecccce------eeeeEEEEc-ccccceeEeEEcC
Q 040712 10 EGDTLHCSFVVVKADNPWHYS-DEGVELTVTGPSDERVRDFDRR------STATFEFVA-YKKGLYKFCFTNK 74 (179)
Q Consensus 10 ~~~~i~~~y~v~~~~~~~~~~-~~~i~~~v~~P~g~~v~~~~~~------~~g~f~f~~-~~~G~y~~Cf~n~ 74 (179)
+|+.|.+.--+.+.+ ..+.. ...+.+.|.||+|+.+.+.... -++.|.... ...|.|++=....
T Consensus 113 PGqtV~~r~~~~~~~-~~p~~~~~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 113 PGDTVNFRVIVLDTE-LKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVE 184 (1325)
T ss_dssp TTCEEEEEEEEEETT-SSCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEET
T ss_pred CCCEEEEEEEEecCC-ccccccCccEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeC
Confidence 578888777777654 22222 2468999999999988765322 233333322 2469999988754
No 56
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=51.33 E-value=31 Score=20.00 Aligned_cols=28 Identities=11% Similarity=0.135 Sum_probs=20.4
Q ss_pred EEEEEeCCCCCCCCCCceEEEEECCCCCeeeccc
Q 040712 17 SFVVVKADNPWHYSDEGVELTVTGPSDERVRDFD 50 (179)
Q Consensus 17 ~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~ 50 (179)
.|++-.+. +....+.+.++||++|.+++
T Consensus 2 ~Fei~~~~------~G~frfrLka~NGevI~sSe 29 (64)
T 3bid_A 2 YFEIYKDA------KGEYRWRLKAANHEIIAQGE 29 (64)
T ss_dssp EEEEEECT------TSCEEEEEECTTSCEEEECC
T ss_pred EEEEEECC------CCCEEEEEEeCCCCEEEECC
Confidence 45555544 34789999999999998654
No 57
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=48.98 E-value=1.1e+02 Score=28.80 Aligned_cols=63 Identities=17% Similarity=0.306 Sum_probs=37.8
Q ss_pred CCcEEEEEEEEEeCCCCCCCCCCce-EEEEECCCCCeeeccc------ceeeeeEEEEc-ccccceeEeEEcC
Q 040712 10 EGDTLHCSFVVVKADNPWHYSDEGV-ELTVTGPSDERVRDFD------RRSTATFEFVA-YKKGLYKFCFTNK 74 (179)
Q Consensus 10 ~~~~i~~~y~v~~~~~~~~~~~~~i-~~~v~~P~g~~v~~~~------~~~~g~f~f~~-~~~G~y~~Cf~n~ 74 (179)
+|+.+.+..-+.+.+ ..+. ...+ .+.|.||+|+.+.+.. +.-++.|.... ...|.|++-....
T Consensus 117 Pgq~V~~rv~~~~~~-~~p~-~~~~~~v~i~dp~g~~i~~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~ 187 (1451)
T 4acq_A 117 PGQTVKFRVVSMDEN-FHPL-NELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 187 (1451)
T ss_dssp TTCEEEEEEEEECTT-CCBC-CCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred CCCEEEEEEEEECCC-CcCc-cCceeEEEEECCCCCEEEEeeeccCCCCeEEEEeECCCCCCceeEEEEEEec
Confidence 467776665555432 2222 2344 6899999999987642 22234444433 3459999988754
No 58
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=47.89 E-value=66 Score=30.77 Aligned_cols=64 Identities=13% Similarity=0.164 Sum_probs=41.9
Q ss_pred CCcEEEEEEEEEeCCCCCCCCCCceEEEEECCCCCeeecccce-eeeeEE---EEcc---cccceeEeEEcCC
Q 040712 10 EGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRR-STATFE---FVAY---KKGLYKFCFTNKS 75 (179)
Q Consensus 10 ~~~~i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~-~~g~f~---f~~~---~~G~y~~Cf~n~~ 75 (179)
+|+.|.+..-+.+.. ..+ ....+.+.|.||+|+.+.+..-. ..|-|+ |..+ ..|.|++=+....
T Consensus 137 PGqtV~~r~i~~d~~-~~p-~~~~v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~~ 207 (1676)
T 3cu7_A 137 PDQSVKVRVYSLNDD-LKP-AKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKE 207 (1676)
T ss_dssp TTCEECEEEEEECTT-CSC-CCCCEEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBSS
T ss_pred CCCEEEEEEEEECCC-Ccc-cccceEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEecC
Confidence 578887777666543 222 23579999999999988765211 245444 3332 4699999988643
No 59
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=43.50 E-value=53 Score=24.72 Aligned_cols=43 Identities=21% Similarity=0.366 Sum_probs=28.3
Q ss_pred CCceEEEEECCCCCeeecccceeee--eEEEEcccccceeEeEEcC
Q 040712 31 DEGVELTVTGPSDERVRDFDRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
...+.+.|.+|.+..+.-. +...| ..+|+..+.|.|.+++.-.
T Consensus 227 ~g~l~v~v~gp~~~~~~~~-d~~dGt~~v~y~p~~~G~y~i~V~~~ 271 (288)
T 2j3s_A 227 AGGLAIAVEGPSKAEISFE-DRKDGSCGVAYVVQEPGDYEVSVKFN 271 (288)
T ss_dssp SEEEEEEEEESSCEEEEEE-ECTTSEEEEEEEESSCEEEEEEEEET
T ss_pred CCceEEEEeCCCCcceeEE-ECCCCEEEEEEEcCCCeeEEEEEEEC
Confidence 4578889999876433221 22234 4577888889999888743
No 60
>1sfc_D Protein (SNAP-25B), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=43.32 E-value=55 Score=20.00 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=34.1
Q ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhHHHH
Q 040712 100 EHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAI 145 (179)
Q Consensus 100 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 145 (179)
+.++.|...+.+|...-..|-.|.+.....-.+....++++..++-
T Consensus 29 ~~Ld~Ls~~v~rLk~la~~ig~Eld~Qn~~Ld~i~~~~D~~~~rl~ 74 (87)
T 1sfc_D 29 ENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRID 74 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 4567777777777777777888888777777777777777776653
No 61
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=43.27 E-value=23 Score=23.36 Aligned_cols=52 Identities=17% Similarity=0.293 Sum_probs=36.1
Q ss_pred CceEEEEECCCCCeeecccceeeeeEEEEcccccceeEeEEcC-CCC--ceeeEEEE
Q 040712 32 EGVELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFTNK-SPY--HETPDFDI 85 (179)
Q Consensus 32 ~~i~~~v~~P~g~~v~~~~~~~~g~f~f~~~~~G~y~~Cf~n~-~s~--~~~V~f~~ 85 (179)
.+..|.|++.+|+.+... .+.|.+.+.--..|.|.+.=... ... ...+.|.+
T Consensus 43 ~GA~F~l~~~~g~~v~~~--~sdG~~~~~~L~~G~Y~l~EtkAP~GY~l~~~i~ftV 97 (121)
T 2x5p_A 43 AGATMELRDSSGKTISTW--ISDGQVKDFYLMPGKYTFVETAAPDGYEVATAITFTV 97 (121)
T ss_dssp CCCEEEEECTTSCEEEEE--ECCSSCEEEEECSEEEEEEEEECCTTCCCCCCEEEEE
T ss_pred CCCEEEEEECCCCEEEEE--EeCCEEEEcccCCcEEEEEEEeCCCCcccCCCEEEEE
Confidence 578899999999887543 34688888888889998865533 221 34555555
No 62
>3ogl_Q JAZ1 incomplete degron peptide; leucine-rich repeats, ubiquitin ligase, SCF, protein binding; HET: 7JA; 3.18A {Arabidopsis thaliana} PDB: 3ogm_Q*
Probab=42.08 E-value=8.9 Score=17.12 Aligned_cols=10 Identities=20% Similarity=0.693 Sum_probs=7.6
Q ss_pred HHHHHhhccc
Q 040712 165 LLKRLFDRKQ 174 (179)
Q Consensus 165 ~lk~fF~~k~ 174 (179)
.|.+||+++|
T Consensus 9 SLqRFleKRk 18 (21)
T 3ogl_Q 9 SLHRFLEKRK 18 (26)
T ss_pred HHHHHHHHhh
Confidence 5778888775
No 63
>1n7s_D SNAP-25A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_D 3rk3_D 3rl0_D 1kil_D 3hd7_D* 3hd9_D 3ipd_D 1urq_D 1xtg_B
Probab=41.94 E-value=48 Score=18.95 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=35.3
Q ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhHHHH
Q 040712 100 EHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAI 145 (179)
Q Consensus 100 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 145 (179)
+.++.|...+.+|...-..|-.|.......-.+.-..++++..++-
T Consensus 10 ~~Ld~L~~~v~~lk~la~~ig~El~~Qn~~Ld~l~~~~d~~~~~l~ 55 (66)
T 1n7s_D 10 ENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRID 55 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 5577788888888888888888888877777777777777776653
No 64
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=40.11 E-value=40 Score=25.58 Aligned_cols=44 Identities=18% Similarity=0.249 Sum_probs=30.4
Q ss_pred CCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcC
Q 040712 31 DEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
...+.+.|.+|+|..+... .+...| ..+|+..+.|.|.+++.-.
T Consensus 142 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~ 188 (311)
T 1wlh_A 142 GDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLR 188 (311)
T ss_dssp CCCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEET
T ss_pred CCcEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEEC
Confidence 4578999999998643221 111233 5677888999999999854
No 65
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=39.98 E-value=30 Score=21.24 Aligned_cols=41 Identities=20% Similarity=0.253 Sum_probs=20.5
Q ss_pred CCCceEEEEECCCCC-eeecccceeeeeEEEEc---------ccccceeEe
Q 040712 30 SDEGVELTVTGPSDE-RVRDFDRRSTATFEFVA---------YKKGLYKFC 70 (179)
Q Consensus 30 ~~~~i~~~v~~P~g~-~v~~~~~~~~g~f~f~~---------~~~G~y~~C 70 (179)
....|.|.+++-..- .+....-...|.++|++ +..|.|-+-
T Consensus 16 ~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~~G~Gd~~v~A~k~G~~g~a 66 (82)
T 3e8v_A 16 ADATVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYS 66 (82)
T ss_dssp TTCEEEEEEEETTEEEEEEEEECCTTSEEEEECCSEEEEEEEEETTEEEEE
T ss_pred CCCEEEEEEEEchheeEEEEEEECCCceEEEEEcCCceEEEeccCCEEEEE
Confidence 445667766653110 11111112368888887 666665443
No 66
>3fn2_A Putative sensor histidine kinase domain; GUT microbiome, structural genomics protein structure initiative; HET: MSE; 1.90A {Clostridium symbiosum atcc 14940}
Probab=39.80 E-value=33 Score=21.97 Aligned_cols=40 Identities=13% Similarity=0.091 Sum_probs=28.2
Q ss_pred ceEEEEECCCCCeeecccceeeeeEEEEccccc---ceeEeEE
Q 040712 33 GVELTVTGPSDERVRDFDRRSTATFEFVAYKKG---LYKFCFT 72 (179)
Q Consensus 33 ~i~~~v~~P~g~~v~~~~~~~~g~f~f~~~~~G---~y~~Cf~ 72 (179)
+=.+.|+|.+|.++....+...+.-++-+.++| -+++||.
T Consensus 49 ~~~lrI~D~~G~vi~~~~~~a~~~~~vLa~~g~n~lGW~Ley~ 91 (106)
T 3fn2_A 49 RGYVRITDKDGQVITYEDGSVQDKTVFLTNEGANKLGWKLEFL 91 (106)
T ss_dssp TCEEEEECTTSCBCSCCCSCSTTEEEEEEECSCCTTCCEEEEE
T ss_pred CCcEEEEcCCCCEEecCCCCcCcceeehhhcCCCccceEEEEE
Confidence 346789999999998555545566677777766 3566664
No 67
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=39.33 E-value=34 Score=16.46 Aligned_cols=19 Identities=5% Similarity=0.218 Sum_probs=10.4
Q ss_pred cHHHHHHHHHHHHHHHHHH
Q 040712 104 PILDQIAKLEEALYDIHFQ 122 (179)
Q Consensus 104 ~l~~~l~~l~~~l~~i~~~ 122 (179)
.+++.+.+|+..++.++..
T Consensus 3 rlee~~r~l~~ivq~lq~r 21 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQER 21 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 4566666665555554443
No 68
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=36.91 E-value=1.2e+02 Score=29.10 Aligned_cols=63 Identities=14% Similarity=0.160 Sum_probs=40.6
Q ss_pred CCcEEEEEEEEEeCCCCCCCCCCceEEEEECCCCCeeecccce---eeee--EEEEcc---cccceeEeEEcC
Q 040712 10 EGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRR---STAT--FEFVAY---KKGLYKFCFTNK 74 (179)
Q Consensus 10 ~~~~i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~---~~g~--f~f~~~---~~G~y~~Cf~n~ 74 (179)
+|+.|.+..-+.+.. ..+ ....+.+.|.||+|+.+.+..-. ..|- ++|..+ ..|.|++=+...
T Consensus 140 PGqtV~~r~i~~d~~-~~p-~~~~v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 210 (1661)
T 2b39_A 140 PGSTVLYRVFTVDHK-LLP-VGQTVFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYE 210 (1661)
T ss_dssp TTSEEEEEEEEECTT-SCC-CCCCEEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEET
T ss_pred CCCEEEEEEEEECCC-Ccc-cCceEEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEee
Confidence 578888777777643 222 33678999999999988763211 2232 334433 459999988743
No 69
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=36.27 E-value=99 Score=20.93 Aligned_cols=41 Identities=10% Similarity=0.054 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHhHhHHHHHHHHHHHHH
Q 040712 114 EALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAMLGSFF 154 (179)
Q Consensus 114 ~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~~~si~~i~v 154 (179)
.-|+.|-.+|+|+...|.-..++-+....-.-.|++++-++
T Consensus 90 ~EL~~VceEQqfl~~QedL~~DL~eDL~ka~etf~lVeq~~ 130 (141)
T 3okq_A 90 AELDKVCEEQQFLTLQEELILDLKEDLGKALETFDLIKLCC 130 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455668999999999999999999888888888877654
No 70
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=35.88 E-value=54 Score=23.36 Aligned_cols=44 Identities=18% Similarity=0.249 Sum_probs=30.0
Q ss_pred CCceEEEEECCCCCeeecc-cceeee--eEEEEcccccceeEeEEcC
Q 040712 31 DEGVELTVTGPSDERVRDF-DRRSTA--TFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~ 74 (179)
...+.+.|.+|+|..+.-. .+...| ..+|+..+.|.|.+-+.-.
T Consensus 43 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~ 89 (212)
T 1qfh_A 43 GDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLR 89 (212)
T ss_dssp CCCEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEET
T ss_pred CCeEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEEC
Confidence 4579999999998644322 111233 4667788899999988754
No 71
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=35.28 E-value=1.1e+02 Score=22.59 Aligned_cols=30 Identities=7% Similarity=0.288 Sum_probs=21.7
Q ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040712 100 EHINPILDQIAKLEEALYDIHFQQHWFDAQ 129 (179)
Q Consensus 100 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~r 129 (179)
..++.+++.+..|++.+.+|.+..+-...|
T Consensus 6 sRvd~~EErIs~le~rleei~q~eq~~ekr 35 (233)
T 2yko_A 6 SRCDQLEERVSAAEDEINEIKREGKFREKR 35 (233)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346788999999999999988655444333
No 72
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=33.85 E-value=1.5e+02 Score=28.54 Aligned_cols=63 Identities=8% Similarity=0.081 Sum_probs=35.9
Q ss_pred CCcEEEEEEEEEeCCCCCCCCCCceEEEEECCCCCeeecccceeeeeEEEEcc---cccceeEeEEcC
Q 040712 10 EGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRRSTATFEFVAY---KKGLYKFCFTNK 74 (179)
Q Consensus 10 ~~~~i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~~~g~f~f~~~---~~G~y~~Cf~n~ 74 (179)
+|+.+.+..-+.+.+ . .+.+..+.+.|.||+|+.+.+..-...-..+|..+ ..|.|++.....
T Consensus 139 PGqtV~~rvi~~~~~-~-~p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~~ 204 (1642)
T 3prx_B 139 PGSPVLYRVFSMDHN-T-SKMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 204 (1642)
T ss_dssp TTCEEEEEEEECCC-------CCCEEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEET
T ss_pred CCCEEEEEEEEEcCC-C-cccCceEEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEeC
Confidence 466665554444322 1 12256789999999999988743111122344433 459999988743
No 73
>2lsj_B DNA polymerase kappa; REV1, RIR, POL kappa, translesion synthesis, TLS, CTD, prote binding-protein binding complex; HET: DNA; NMR {Mus musculus}
Probab=39.37 E-value=9 Score=17.91 Aligned_cols=10 Identities=40% Similarity=0.747 Sum_probs=7.4
Q ss_pred HHHHhhcccC
Q 040712 166 LKRLFDRKQG 175 (179)
Q Consensus 166 lk~fF~~k~~ 175 (179)
=++||.+||.
T Consensus 6 K~SFFdKKRs 15 (26)
T 2lsj_B 6 KKSFFDKKRS 15 (26)
Confidence 4688988874
No 74
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=31.62 E-value=85 Score=18.73 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=27.5
Q ss_pred cccccCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 040712 96 HAKDEHINPILDQIAKLEEALYDIHFQQHWFDA 128 (179)
Q Consensus 96 ~a~~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~ 128 (179)
.|-.+.++-|.+.|..|.+....+..|-.++|.
T Consensus 11 ~AVREEVevLKe~I~EL~e~~~qLE~EN~~Lk~ 43 (78)
T 1dip_A 11 YAVREEVEILKEQIRELVEKNSQLERENTLLKT 43 (78)
T ss_dssp GTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678899999999999999999888887764
No 75
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=30.19 E-value=1.1e+02 Score=24.37 Aligned_cols=58 Identities=12% Similarity=0.119 Sum_probs=35.0
Q ss_pred CcEEEEEEEEEeCCCCCCCCCCceEEEEECCCCCeeeccc-ceeeee-EEEEcc----cccceeEeEEcC
Q 040712 11 GDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFD-RRSTAT-FEFVAY----KKGLYKFCFTNK 74 (179)
Q Consensus 11 ~~~i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~-~~~~g~-f~f~~~----~~G~y~~Cf~n~ 74 (179)
+..+++.|.+...+ ...+.++|++.+|+.+.... ....+. .+|+.. +.|.|.+-+...
T Consensus 310 ~g~~~l~f~~~~~~------~~~v~~~v~d~~~~~~~~~~~~v~~~~~~~~tl~ls~~~aGhh~lvv~~~ 373 (391)
T 2xwx_A 310 EQPIQLDLTLEAQG------EMSAELTVYNHHQKPLASWSQAMTDGELKSITLELSEAKAGHHMLVSRIK 373 (391)
T ss_dssp SSCCEEEEEEEEES------SEEEEEEEECTTSCEEEEEEEEECTTCEEEEEEECSCCCSEEEEEEEEEE
T ss_pred CCcEEEEEEEEecC------ceEEEEEEEcCCCCccceeeEEEcCCCcceEEEEccCCCCccEEEEEEEE
Confidence 33445555555444 46788888898888876653 222222 334333 678888888765
No 76
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=30.06 E-value=67 Score=17.04 Aligned_cols=19 Identities=21% Similarity=0.137 Sum_probs=10.2
Q ss_pred cHHHHHHHHHHHHHHHHHH
Q 040712 104 PILDQIAKLEEALYDIHFQ 122 (179)
Q Consensus 104 ~l~~~l~~l~~~l~~i~~~ 122 (179)
.++++|..|++.|..|...
T Consensus 20 ~LE~Ri~~LE~KLd~L~~~ 38 (43)
T 2pnv_A 20 DFEKRIVTLETKLETLIGS 38 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3555555555555555443
No 77
>3ogk_Q JAZ1 incomplete degron peptide; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana}
Probab=28.55 E-value=16 Score=16.50 Aligned_cols=10 Identities=20% Similarity=0.693 Sum_probs=7.4
Q ss_pred HHHHHhhccc
Q 040712 165 LLKRLFDRKQ 174 (179)
Q Consensus 165 ~lk~fF~~k~ 174 (179)
.|.+|+++++
T Consensus 4 SLqRFleKRk 13 (22)
T 3ogk_Q 4 SLHRFLEKRK 13 (26)
T ss_pred hHHHHHHHHH
Confidence 4778888765
No 78
>1l4a_D S-SNAP25 fusion protein; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1
Probab=28.24 E-value=88 Score=19.12 Aligned_cols=45 Identities=13% Similarity=0.144 Sum_probs=31.0
Q ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhHHH
Q 040712 100 EHINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRA 144 (179)
Q Consensus 100 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv 144 (179)
+.++.|...+.+|...-..|-.|.+-....-.+.-..++++..++
T Consensus 30 ~~Ld~ls~~l~rLk~mA~~mg~Eld~Qn~~LD~i~~~~D~~~~rl 74 (87)
T 1l4a_D 30 NNMKEVSSMIGNLRNMAIDMGNEIGSQNRQVDRIQQKAESNESRI 74 (87)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356666666777777777777777777766666767777766665
No 79
>2k7i_A UPF0339 protein ATU0232; protein of unknown function, swapped dimer. PSI2, structural genomics, unknown function; NMR {Agrobacterium tumefaciens str} SCOP: d.348.1.1
Probab=27.57 E-value=65 Score=19.72 Aligned_cols=29 Identities=7% Similarity=0.087 Sum_probs=20.3
Q ss_pred EEEEEEEEeCCCCCCCCCCceEEEEECCCCCeeecc
Q 040712 14 LHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDF 49 (179)
Q Consensus 14 i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~ 49 (179)
+.+ |++..+. +....|.+..+||++|.+.
T Consensus 22 Mag-FEi~k~~------~Gq~rFrLkA~NGevIasS 50 (83)
T 2k7i_A 22 MYK-FEIYQDK------AGEYRFRFKASNGETMFSS 50 (83)
T ss_dssp CCE-EEEEECT------TSCEEEEECCTTSCCCEEB
T ss_pred ccc-EEEEEcC------CCCEEEEEEECCCCEEEEC
Confidence 344 7777654 3468888888888888754
No 80
>2wy3_B UL16, uncharacterized protein UL16; immune system-viral protein complex, immune response, innate immunity, structural mimicry; HET: NAG PEU; 1.80A {Human herpesvirus 5 strain AD169}
Probab=27.46 E-value=63 Score=21.26 Aligned_cols=79 Identities=15% Similarity=0.283 Sum_probs=44.8
Q ss_pred cceeeecCCCcEEEEEEEEEeCCCCCCCCCCceEEEEECCCCCeeecccc--------------eeeee-EEE---Eccc
Q 040712 2 KVSHNVECEGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDR--------------RSTAT-FEF---VAYK 63 (179)
Q Consensus 2 Cf~e~v~~~~~~i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~--------------~~~g~-f~f---~~~~ 63 (179)
|+|+++. ++..+-+.|...-.+ .-++..++- +|..+.+-.. .+-.+ |.. +-..
T Consensus 38 cyy~nvt-~dei~gvaf~~q~ne-------s~~d~wly~-n~t~irnfs~~~~nilq~gl~mr~vp~tklyt~r~v~n~t 108 (158)
T 2wy3_B 38 CYYENVT-EDEIIGVAFTWQHNE-------SVVDLWLYQ-NDTVIRNFSDITTNILQDGLKMRTVPVTKLYTSRMVTNLT 108 (158)
T ss_dssp EEEESCC-TTCBEEEEEEETTCT-------TCEEEEEEE-TTEEEECCSCCTTEEEEEEEECSSSSEEEEEEEECCSTTT
T ss_pred EEecccC-ccceEEEEEEeecCc-------hhhhheeee-CCcEEeehhhhhHHHHhccceeeeechhhhhhhhhhcccc
Confidence 9999999 688777777654433 468888874 4444433211 11111 111 1134
Q ss_pred ccceeEeEEcCCCCceeeE-EEEEeccc
Q 040712 64 KGLYKFCFTNKSPYHETPD-FDIHVAHY 90 (179)
Q Consensus 64 ~G~y~~Cf~n~~s~~~~V~-f~~~~~~~ 90 (179)
.|.|. ||.....+.+.|+ ..++.|..
T Consensus 109 ~gryd-c~rc~ngt~~iier~yv~lgsl 135 (158)
T 2wy3_B 109 VGRYD-CLRCENGTTKIIERLYVRLGSL 135 (158)
T ss_dssp CEEEE-EEEEETTEEEEEEEEEEECCCS
T ss_pred cccee-eEEecCCchhhHHhHHhhhhcc
Confidence 57774 9998887645443 44556643
No 81
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=26.93 E-value=1.9e+02 Score=22.45 Aligned_cols=21 Identities=10% Similarity=0.224 Sum_probs=10.2
Q ss_pred HHHhHhHHHHHHHHHHHHHHH
Q 040712 136 VNKTMSRRAIYKAMLGSFFLI 156 (179)
Q Consensus 136 ~~es~~~rv~~~si~~i~vli 156 (179)
.+..+|.-+...+++.++++.
T Consensus 295 is~~~N~imk~LTiit~IflP 315 (363)
T 2iub_A 295 VSNKTNEVMKVLTIIATIFMP 315 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555554444433
No 82
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=26.81 E-value=1e+02 Score=25.55 Aligned_cols=56 Identities=11% Similarity=0.111 Sum_probs=37.0
Q ss_pred CCceEEEEECCCCCeeecccce--eeeeEEEEcccccceeEeEEcCCCCceeeEEEEEe
Q 040712 31 DEGVELTVTGPSDERVRDFDRR--STATFEFVAYKKGLYKFCFTNKSPYHETPDFDIHV 87 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~~~~~--~~g~f~f~~~~~G~y~~Cf~n~~s~~~~V~f~~~~ 87 (179)
..++++.|++|+|..+...... ..-+..+.....|+|.+-+...... -...|++..
T Consensus 458 ~~dldl~l~~p~G~~~~~~~~~~~~~E~v~~~~~~~G~y~i~V~~~~~s-g~y~~~l~~ 515 (539)
T 3afg_A 458 GSDLDLYLYDPNGNQVDYSYTAYYGFEKVGYYNPTAGTWTIKVVSYSGS-ANYQVDVVS 515 (539)
T ss_dssp TCEEEEEEECTTSCEEEEECCSSBSCEEEEEESCCSEEEEEEEEEEESC-EEEEEEEEE
T ss_pred CCCeEEEEECCCCCEeeccccCCCceeEEEECCCCCEEEEEEEEeccCC-ceEEEEEEE
Confidence 3589999999999987654321 1234567788899999999865322 234444443
No 83
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=26.00 E-value=1.1e+02 Score=20.02 Aligned_cols=52 Identities=10% Similarity=0.084 Sum_probs=34.0
Q ss_pred EEEEEEeCCCCCCCCCCceEEEEECCCCCeeecccce------------------eeeeEEEEcccccceeEeEEc
Q 040712 16 CSFVVVKADNPWHYSDEGVELTVTGPSDERVRDFDRR------------------STATFEFVAYKKGLYKFCFTN 73 (179)
Q Consensus 16 ~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~~~~------------------~~g~f~f~~~~~G~y~~Cf~n 73 (179)
+.|++..+. +....|.+..+||++|.+++.= ....|.......|.|.+=+..
T Consensus 3 g~FEi~~~~------~g~~rFrLka~NgeiI~sSe~Y~sk~~a~~gI~sVk~na~~~~~fe~~~~~~gk~yF~Lka 72 (118)
T 2k49_A 3 GWYELSKSS------NDQFKFVLKAGNGEVILTSELYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLKA 72 (118)
T ss_dssp CEEEEEECT------TSCEEEEEECSSSCEEEECCCBSSHHHHHHHHHHHHHHTTCGGGEEEEEETTTEEEEEEEC
T ss_pred ceEEEEEcC------CCCEEEEEEECCCCEEEECCCcCCHHHHHHHHHHHHHhCcccceEEEEEccCCCEEEEEEc
Confidence 467777655 3579999999999999864311 123566666666666554443
No 84
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=25.99 E-value=76 Score=18.70 Aligned_cols=30 Identities=13% Similarity=0.316 Sum_probs=18.4
Q ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 040712 99 DEHINPILDQIAKLEEALYDIHFQQHWFDA 128 (179)
Q Consensus 99 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~ 128 (179)
..++..|+..+..|......+..+-..++.
T Consensus 28 ~~~i~~LE~~v~~le~~~~~l~~en~~Lr~ 57 (70)
T 1gd2_E 28 EDHLKALETQVVTLKELHSSTTLENDQLRQ 57 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667777777777666665555544443
No 85
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=25.17 E-value=1.2e+02 Score=18.41 Aligned_cols=17 Identities=18% Similarity=0.491 Sum_probs=12.8
Q ss_pred eeeEEEEcccccceeE-e
Q 040712 54 TATFEFVAYKKGLYKF-C 70 (179)
Q Consensus 54 ~g~f~f~~~~~G~y~~-C 70 (179)
...+.|+..+.|.|.+ |
T Consensus 68 ~~~~~~t~~~~G~Y~y~C 85 (100)
T 4hci_A 68 EKNITVKPKSAGTYELIC 85 (100)
T ss_dssp EEEEEECCCSCEEEEEEC
T ss_pred ceeEEEecccCceEEEEC
Confidence 4567888888898864 5
No 86
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=25.15 E-value=77 Score=16.17 Aligned_cols=22 Identities=32% Similarity=0.451 Sum_probs=14.9
Q ss_pred cccHHHHHHHHHHHHHHHHHHH
Q 040712 102 INPILDQIAKLEEALYDIHFQQ 123 (179)
Q Consensus 102 ~~~l~~~l~~l~~~l~~i~~~q 123 (179)
+..+.+.+.++.+.+..++++-
T Consensus 10 LeEtkeQi~~l~~kl~~LkeEK 31 (38)
T 2l5g_A 10 LEETKEQILKLEEKLLALQEEK 31 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677777777777777653
No 87
>1gu3_A Endoglucanase C; carbohydrate-binding module, carbohydrate binding module, CBM, cellulose; HET: BGC; 2.3A {Cellulomonas fimi} SCOP: b.18.1.14 PDB: 1ulo_A 1ulp_A
Probab=24.63 E-value=57 Score=22.10 Aligned_cols=27 Identities=26% Similarity=0.342 Sum_probs=16.6
Q ss_pred ecCCCcEEEEEEEEEeCCCCCCCCCCceEEEEEC
Q 040712 7 VECEGDTLHCSFVVVKADNPWHYSDEGVELTVTG 40 (179)
Q Consensus 7 v~~~~~~i~~~y~v~~~~~~~~~~~~~i~~~v~~ 40 (179)
+. +|..=.++|.+.... ...|.+.|-.
T Consensus 54 L~-~G~tY~lsF~A~as~------~r~i~v~i~~ 80 (149)
T 1gu3_A 54 IE-EGTTYTLRYTATAST------DVTVRALVGQ 80 (149)
T ss_dssp BC-TTCEEEEEEEEEESS------CEECEEEEEE
T ss_pred Ec-CCCEEEEEEEEEeCC------CcEEEEEEec
Confidence 44 467777777776543 3466666654
No 88
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=24.40 E-value=1.1e+02 Score=23.77 Aligned_cols=42 Identities=14% Similarity=0.116 Sum_probs=29.9
Q ss_pred CCceEEEEECCCCCeeec------ccceeeeeEEEEcccccceeEeEE
Q 040712 31 DEGVELTVTGPSDERVRD------FDRRSTATFEFVAYKKGLYKFCFT 72 (179)
Q Consensus 31 ~~~i~~~v~~P~g~~v~~------~~~~~~g~f~f~~~~~G~y~~Cf~ 72 (179)
-.+..|.|++++|..+.. ..-...|.+.|.--..|.|.+-=.
T Consensus 266 L~GA~F~l~~~~g~~~~~~~~~~~~~td~~G~~~~~~L~~G~Y~l~E~ 313 (355)
T 3kpt_A 266 MKGAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIFET 313 (355)
T ss_dssp CSCCEEEEEETTSCBCBSSSSBCEEECCTTSEEEEEEEESSEEEEEEE
T ss_pred cCCCEEEEEeCCCCEEEeccceEEEEECCCCeEEECcCCCceEEEEEE
Confidence 367899999999987742 111236888888888888886543
No 89
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=24.21 E-value=1.1e+02 Score=24.28 Aligned_cols=43 Identities=16% Similarity=0.215 Sum_probs=28.4
Q ss_pred CceEEEEECCCCCeeecccc-----------eeeeeEEEEcccccceeEeEEcC
Q 040712 32 EGVELTVTGPSDERVRDFDR-----------RSTATFEFVAYKKGLYKFCFTNK 74 (179)
Q Consensus 32 ~~i~~~v~~P~g~~v~~~~~-----------~~~g~f~f~~~~~G~y~~Cf~n~ 74 (179)
.++++.|++|+|..++.... ..--+..+.....|.|++-+...
T Consensus 366 ndldl~v~~~~g~~~~~n~~~~~~~~~~d~~~n~E~v~~~~~~~G~y~i~V~~~ 419 (434)
T 1wmd_A 366 NDLDLVITAPNGTQYVGNDFTSPYNDNWDGRNNVENVFINAPQSGTYTIEVQAY 419 (434)
T ss_dssp SEEEEEEECTTSCEEETTCCSSSTTSCCCSSCSEEEEEESSCCSEEEEEEEEEE
T ss_pred eccCEEEEeCCCCEEeCCCccccccCCCCCCCceeEEEEcCCCCeEEEEEEEEE
Confidence 47999999999988652211 01223556667788888887644
No 90
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=23.70 E-value=2.1e+02 Score=20.72 Aligned_cols=49 Identities=8% Similarity=0.175 Sum_probs=30.7
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhHHHHHHHH
Q 040712 101 HINPILDQIAKLEEALYDIHFQQHWFDAQTERQSIVNKTMSRRAIYKAM 149 (179)
Q Consensus 101 ~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~~~si 149 (179)
.+..++..+..+.+.+..+..+..-+|.|..+.+.........-+.-.+
T Consensus 67 ~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~a~e~~~~~L 115 (213)
T 4ani_A 67 QIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDL 115 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666777777777777777777777766666554443333333
No 91
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A*
Probab=23.66 E-value=1.3e+02 Score=18.98 Aligned_cols=39 Identities=10% Similarity=0.031 Sum_probs=24.8
Q ss_pred ceEEEEECCCCCeeecccceeeeeEEEEcccccceeEeEE
Q 040712 33 GVELTVTGPSDERVRDFDRRSTATFEFVAYKKGLYKFCFT 72 (179)
Q Consensus 33 ~i~~~v~~P~g~~v~~~~~~~~g~f~f~~~~~G~y~~Cf~ 72 (179)
++.+ ..+|+|.+.....+.....+.+....+|.|-+|+-
T Consensus 76 ~i~i-~~~~~G~P~l~~~~~~~~~~~~SiSH~~~~a~A~v 114 (121)
T 1f7l_A 76 DIEI-RKDQNGKPYIICTKLSPAAVHVSITHTKEYAAAQV 114 (121)
T ss_dssp GCEE-EECTTSCEEEEETTTEEEEEEEEEEECSSEEEEEE
T ss_pred EEEE-EECCCCCcEEEECccccCcEEEEEeCCCCcEEEEE
Confidence 3443 35788888765443323456677778888887764
No 92
>3l4f_A RHO guanine nucleotide exchange factor 7; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=23.57 E-value=1.1e+02 Score=17.48 Aligned_cols=41 Identities=10% Similarity=0.268 Sum_probs=27.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhHHHHHhHhHHH
Q 040712 104 PILDQIAKLEEALYDIHFQQHWFD---AQTERQSIVNKTMSRRA 144 (179)
Q Consensus 104 ~l~~~l~~l~~~l~~i~~~q~~~~---~re~~~~~~~es~~~rv 144 (179)
.+.+.+..|.+.+.+++.+..+++ +.|.+.|...|..-.++
T Consensus 4 SLVDtVYalkDev~eLk~e~k~~k~~le~eqraRk~LE~~vrk~ 47 (61)
T 3l4f_A 4 SLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKV 47 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356677778888888888877666 44555666666554443
No 93
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=23.23 E-value=45 Score=21.67 Aligned_cols=14 Identities=0% Similarity=-0.289 Sum_probs=11.4
Q ss_pred ceEEEEECCCCCee
Q 040712 33 GVELTVTGPSDERV 46 (179)
Q Consensus 33 ~i~~~v~~P~g~~v 46 (179)
.-.+.++||+|+.+
T Consensus 115 ~~~~~f~DPDGn~i 128 (149)
T 4gym_A 115 MYGRSFHDLDGHLW 128 (149)
T ss_dssp EEEEEEECTTCCEE
T ss_pred EEEEEEEcCCCCEE
Confidence 45788999999866
No 94
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=22.67 E-value=95 Score=16.30 Aligned_cols=25 Identities=16% Similarity=0.284 Sum_probs=14.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHH
Q 040712 103 NPILDQIAKLEEALYDIHFQQHWFD 127 (179)
Q Consensus 103 ~~l~~~l~~l~~~l~~i~~~q~~~~ 127 (179)
..++.....|++.+..+.+|-..+|
T Consensus 13 k~le~~naeLEervstLq~EN~mLR 37 (42)
T 2oqq_A 13 KDLENKNSELEERLSTLQNENQMLR 37 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 3455566666666666666655444
No 95
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=22.25 E-value=2.6e+02 Score=21.30 Aligned_cols=12 Identities=17% Similarity=0.047 Sum_probs=5.4
Q ss_pred HhHhHHHHHHHH
Q 040712 138 KTMSRRAIYKAM 149 (179)
Q Consensus 138 es~~~rv~~~si 149 (179)
..+|..+...++
T Consensus 273 ~~~N~~mk~LTi 284 (339)
T 4ev6_A 273 IKMNQIMKILTM 284 (339)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344444444444
No 96
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=21.34 E-value=58 Score=22.78 Aligned_cols=37 Identities=5% Similarity=-0.186 Sum_probs=23.4
Q ss_pred CCcEEEEEEEEEeCCCCCCCCCCceEEEEECCCCCeeecc
Q 040712 10 EGDTLHCSFVVVKADNPWHYSDEGVELTVTGPSDERVRDF 49 (179)
Q Consensus 10 ~~~~i~~~y~v~~~~~~~~~~~~~i~~~v~~P~g~~v~~~ 49 (179)
.|+.+++.+.+.-.... ....+.+.|++..|..++..
T Consensus 68 ~Ge~v~l~i~~~~~~~i---~~~v~G~~Ik~~~G~~I~g~ 104 (188)
T 2r5o_A 68 GNQQTDFLMKVVFEYDF---DCVVPGILIKTLDGLFLYGT 104 (188)
T ss_dssp TTCEEEEEEEEEESSCE---EEEEEEEEEEETTCCEEEEE
T ss_pred CCCEEEEEEEEEECCcC---CccEEEEEEECCCCCEEEec
Confidence 36666666655433211 24567889999999888763
No 97
>2lme_A Adhesin YADA; trimeric autotransporter, membrane protein, cell adhesion; NMR {Yersinia enterocolitica subsp}
Probab=21.11 E-value=1.4e+02 Score=18.92 Aligned_cols=27 Identities=7% Similarity=0.134 Sum_probs=21.0
Q ss_pred cccCcccHHHHHHHHHHHHHHHHHHHH
Q 040712 98 KDEHINPILDQIAKLEEALYDIHFQQH 124 (179)
Q Consensus 98 ~~~~~~~l~~~l~~l~~~l~~i~~~q~ 124 (179)
...+++....++++|++.++++.++..
T Consensus 7 ~~~q~~~~~~~~~~l~~~i~~~~~~~~ 33 (105)
T 2lme_A 7 SHPQFEKGAHKFRQLDNRLDKLDTRVD 33 (105)
T ss_dssp CCCCSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356788888889899888888877653
Done!