BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040713
(157 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana
GN=At3g14460 PE=3 SV=1
Length = 1424
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 1 MPCAKLTRLEIYDCKRLEALPKGLHNLTSLQELKIGG--ELPSLEEDGLPTNLHSLWIDG 58
+P KL+ + + +CK+L+ALP+ L LTSL L I E+ ++ G P+NL +L I
Sbjct: 1236 LPTPKLSSMLLSNCKKLQALPEKLFGLTSLLSLFIIKCPEIETIPGGGFPSNLRTLCISL 1295
Query: 59 NKKIWKSMIERGRGFHRFSSLRHLTISGCDDDMVSFPPELKYFPEKG-LPSSLLQLWI 115
K+ + G +LR+L I G ++D+ S FPE+G LP S+ L I
Sbjct: 1296 CDKLTPRI---EWGLRDLENLRNLEIDGGNEDIES-------FPEEGLLPKSVFSLRI 1343
>sp|Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2
PE=1 SV=1
Length = 970
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 63/145 (43%), Gaps = 39/145 (26%)
Query: 4 AKLTRLEIYDCKRLEALPKGLHNLTSLQELKIG--GELPSLEEDGLPTNLHSLWIDGNKK 61
A L L I C L+ LP L +L +L+ LKI L SL E+GL
Sbjct: 859 ANLKYLTISRCNNLKELPTSLASLNALKSLKIQLCCALESLPEEGLEG------------ 906
Query: 62 IWKSMIERGRGFHRFSSLRHLTISGCDDDMVSFPPELKYFPEKGLP--SSLLQLWIWGCP 119
SSL L + C+ LK PE GL ++L L I GCP
Sbjct: 907 --------------LSSLTELFVEHCN--------MLKCLPE-GLQHLTTLTSLKIRGCP 943
Query: 120 LIAEKCRKDGGQYWDLLTHIPSVSI 144
+ ++C K G+ W ++HIP+V+I
Sbjct: 944 QLIKRCEKGIGEDWHKISHIPNVNI 968
>sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4 OS=Solanum bulbocastanum
GN=RGA4 PE=2 SV=1
Length = 988
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 33/166 (19%)
Query: 4 AKLTRLEIYDCKRLEALPKGLHNLTSLQELKIGGEL--PSLEEDGLP--TNLHSL-WIDG 58
+ + +LE++ L + NL++L L+IG SL E+ TNL L + D
Sbjct: 830 SSVKKLEVHGNTNTRGLS-SISNLSTLTSLRIGANYRATSLPEEMFTSLTNLEFLSFFD- 887
Query: 59 NKKIWKSMIERGRGFHRFSSLRHLTISGCDDDMVSFPPE------------------LKY 100
+K++ + ++L+ L I CD + SFP + LK
Sbjct: 888 ----FKNLKDLPTSLTSLNALKRLQIESCDS-LESFPEQGLEGLTSLTQLFVKYCKMLKC 942
Query: 101 FPEKGLP--SSLLQLWIWGCPLIAEKCRKDGGQYWDLLTHIPSVSI 144
PE GL ++L L + GCP + ++C K+ G+ W + HIP++ I
Sbjct: 943 LPE-GLQHLTALTNLGVSGCPEVEKRCDKEIGEDWHKIAHIPNLDI 987
>sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum
GN=RGA3 PE=2 SV=2
Length = 992
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 72/155 (46%), Gaps = 34/155 (21%)
Query: 4 AKLTRLEIYD----CKRLEALPKGLHNLTSLQELKIGGELPSLEEDGLPTNLHSLWIDGN 59
+ LT L+I+ LE + K L NL L L +L+E LPT+L SL N
Sbjct: 856 STLTSLKIFSNHTVTSLLEEMFKNLENLIYLS----VSFLENLKE--LPTSLASL---NN 906
Query: 60 KK--------IWKSMIERGRGFHRFSSLRHLTISGCDDDMVSFPPELKYFPEKGLP--SS 109
K +S+ E G SSL L + C+ LK PE GL ++
Sbjct: 907 LKCLDIRYCYALESLPEEG--LEGLSSLTELFVEHCN--------MLKCLPE-GLQHLTT 955
Query: 110 LLQLWIWGCPLIAEKCRKDGGQYWDLLTHIPSVSI 144
L L I GCP + ++C K G+ W ++HIP+V+I
Sbjct: 956 LTSLKIRGCPQLIKRCEKGIGEDWHKISHIPNVNI 990
>sp|P59584|RP8HA_ARATH Disease resistance protein RPH8A OS=Arabidopsis thaliana GN=RPH8A
PE=3 SV=1
Length = 910
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 1 MPCAKLTRLEIYDCKRLEALPKGLHNLTSLQELKIGG 37
MPC L L I+DC++L+ LP GL +TSL+ELKI G
Sbjct: 844 MPC--LRTLTIHDCEKLKELPDGLKYITSLKELKIEG 878
>sp|Q8W4J9|RPP8_ARATH Disease resistance protein RPP8 OS=Arabidopsis thaliana GN=RPP8
PE=1 SV=2
Length = 908
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 1 MPCAKLTRLEIYDCKRLEALPKGLHNLTSLQELKIGG 37
MPC L L I DCK+L+ LP GL +TSL+ELKI G
Sbjct: 842 MPC--LRTLTIDDCKKLKELPDGLKYITSLKELKIEG 876
>sp|Q9FJK8|RP8L4_ARATH Probable disease resistance RPP8-like protein 4 OS=Arabidopsis
thaliana GN=RPP8L4 PE=2 SV=1
Length = 908
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Query: 1 MPCAKLTRLEIYDCKRLEALPKGLHNLTSLQELKI 35
MPC L L I+DC++L+ LP GL +TSL+ELKI
Sbjct: 842 MPC--LRTLTIHDCEKLKELPDGLKYITSLKELKI 874
>sp|Q9FJB5|RP8L3_ARATH Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana
GN=RPP8L3 PE=2 SV=1
Length = 901
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 24/90 (26%)
Query: 1 MPCAKLTRLEIYDCKRLEALPKGLHNLTSLQELKIGGELPSLEEDGLPTNLHSLWIDGNK 60
MPC L L I+ C++LE LP GL +TSL+ELK I+G K
Sbjct: 833 MPC--LRDLIIHSCEKLEELPDGLKYVTSLKELK---------------------IEGMK 869
Query: 61 KIWKSMIERGRGFHRFSSLRHLTISGCDDD 90
+ WK + G +++ + + CDD+
Sbjct: 870 REWKEKLV-GEDYYKVQHIPDVQFFNCDDE 898
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 36.6 bits (83), Expect = 0.066, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 4 AKLTRLEIYDCKRLEALPKGLHNLTSLQELKIGG--ELPSLEEDGLPTNLHSLWIDG 58
KL+ LE+ DC RL +LP + NL L+ L + G EL +++ G P NL L++ G
Sbjct: 724 GKLSCLELNDCSRLRSLPN-MVNLELLKALDLSGCSELETIQ--GFPRNLKELYLVG 777
>sp|P0C8S1|RP8L2_ARATH Probable disease resistance RPP8-like protein 2 OS=Arabidopsis
thaliana GN=RPP8L2 PE=1 SV=1
Length = 906
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 1 MPCAKLTRLEIYDCKRLEALPKGLHNLTSLQELKI 35
MPC L L I +CK+L+ LP GL +T L+ELKI
Sbjct: 840 MPC--LRTLTIDNCKKLKQLPDGLKYVTCLKELKI 872
>sp|Q96NW7|LRRC7_HUMAN Leucine-rich repeat-containing protein 7 OS=Homo sapiens GN=LRRC7
PE=1 SV=1
Length = 1537
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 4 AKLTRLEIYDCKR--LEALPKGLHNLTSLQELKIG----GELPSLEEDGLPTNLHSLWID 57
+L +L I + + L+ LPK +H L L+ L +G GELP + + NL LW+D
Sbjct: 158 GRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQI--QNLRELWMD 215
Query: 58 GN 59
N
Sbjct: 216 NN 217
>sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1 OS=Solanum bulbocastanum
GN=RGA1 PE=2 SV=2
Length = 979
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 22/147 (14%)
Query: 6 LTRLEIYDCKRLEALPKGL-HNLTSLQELKIGGELPSLEEDGLPTNLHSLWIDGNKKI-- 62
LT L+I D +LP+ + +L +L+ LKI +L+E LPT+L SL + K
Sbjct: 845 LTSLDISDNVEATSLPEEMFKSLANLKYLKISF-FRNLKE--LPTSLASLNALKSLKFEF 901
Query: 63 ---WKSMIERGRGFHRFSSLRHLTISGCDDDMVSFPPELKYFPEKGLP--SSLLQLWIWG 117
+S+ E G +SL L++S C LK PE GL ++L L I
Sbjct: 902 CDALESLPEEG--VKGLTSLTELSVSNC--------MMLKCLPE-GLQHLTALTTLTITQ 950
Query: 118 CPLIAEKCRKDGGQYWDLLTHIPSVSI 144
CP++ ++C + G+ W + HIP +++
Sbjct: 951 CPIVFKRCERGIGEDWHKIAHIPYLTL 977
>sp|F1MCA7|LRRC7_BOVIN Leucine-rich repeat-containing protein 7 OS=Bos taurus GN=LRRC7
PE=3 SV=3
Length = 1536
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 4 AKLTRLEIYDCKRLEALPKGLHNLTSLQELKIGG----ELPSLEEDGLPTNLHSLWIDGN 59
AKL LE+ + L+ LPK +H L L+ L +G ELP + + NL LW+D N
Sbjct: 161 AKLRILELRE-NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQI--QNLRELWMDNN 217
Query: 60 K-----KIW--KSMIERGRGFHRFSSLRHLTISGCD 88
+W K ++ +R ++ + ISGC+
Sbjct: 218 ALQVLPGVWKLKMLVYLDMSKNRIETV-DMDISGCE 252
>sp|Q9V780|LAP1_DROME Protein lap1 OS=Drosophila melanogaster GN=Lap1 PE=2 SV=1
Length = 849
Score = 33.5 bits (75), Expect = 0.52, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 4 AKLTRLEIYDCK--RLEALPKGLHNLTSLQELKIGG----ELPSLEEDGLPTNLHSLWID 57
+L L I + + L LPK + L +LQ L IGG ELP E G +L LWID
Sbjct: 152 GRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELP--EVVGELKSLRELWID 209
Query: 58 GNK 60
N+
Sbjct: 210 FNQ 212
>sp|Q80TE7|LRRC7_MOUSE Leucine-rich repeat-containing protein 7 OS=Mus musculus GN=Lrrc7
PE=1 SV=2
Length = 1490
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 4 AKLTRLEIYDCKR--LEALPKGLHNLTSLQELKIGG----ELPSLEEDGLPTNLHSLWID 57
+L +L I + + L+ LPK +H L L+ L +G ELP + + NL LW+D
Sbjct: 158 GRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQI--QNLRELWMD 215
Query: 58 GN 59
N
Sbjct: 216 NN 217
>sp|P70587|LRRC7_RAT Leucine-rich repeat-containing protein 7 OS=Rattus norvegicus
GN=Lrrc7 PE=1 SV=2
Length = 1490
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 4 AKLTRLEIYDCKR--LEALPKGLHNLTSLQELKIGG----ELPSLEEDGLPTNLHSLWID 57
+L +L I + + L+ LPK +H L L+ L +G ELP + + NL LW+D
Sbjct: 158 GRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQI--QNLRELWMD 215
Query: 58 GN 59
N
Sbjct: 216 NN 217
>sp|A6NIK2|LR10B_HUMAN Leucine-rich repeat-containing protein 10B OS=Homo sapiens
GN=LRRC10B PE=4 SV=2
Length = 292
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 13 DCKRLEALPKGLHNLTSLQELKIGG-ELPSLEED-GLPTNLHSLWIDGN--KKIWKSMIE 68
D +LE LP GL L L L +GG L +L D +L LWI+GN ++ + ++
Sbjct: 75 DFNKLERLPDGLCRLPRLTRLYLGGNRLLALPADFAQLQSLRCLWIEGNFLRRFPRPLL- 133
Query: 69 RGRGFHRFSSLRHLTISGCDDDMVSFPPELKYFPEKGLPSSLLQLWIWG 117
R +L+ L + D+ + + P EL + L LW++G
Sbjct: 134 ------RLVALQSLQMG--DNRLRALPAELPRM------TGLRGLWLYG 168
>sp|P51886|LUM_RAT Lumican OS=Rattus norvegicus GN=Lum PE=2 SV=1
Length = 338
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 18 EALPKGLHNLTSLQELKIGGELPSLEEDGLPTNLHSLWIDGNKKIWKSMIERGRGFHRFS 77
EA+ L L SL+ L + S GLPT+L +L++D N KI E F+RF+
Sbjct: 174 EAVSASLKGLKSLEYLDLSFNQMSKLPAGLPTSLLTLYLDNN-KITNIPDEY---FNRFT 229
Query: 78 SLRHLTIS 85
L++L +S
Sbjct: 230 GLQYLRLS 237
>sp|Q9XIF0|DRL13_ARATH Putative disease resistance protein At1g59780 OS=Arabidopsis
thaliana GN=At1g59780 PE=2 SV=1
Length = 906
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 6 LTRLEIYDCKRLEALPKGLHNLTSLQELKI 35
L L I DCK+L+ +P GL ++SL+EL I
Sbjct: 828 LHTLHIVDCKKLKEIPDGLRFISSLKELAI 857
>sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1
PE=1 SV=1
Length = 926
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 5 KLTRLEIYDCKRLEALPKGLHNLTSLQELKI 35
+L +L + C+ LE +P+G+ NL +LQEL +
Sbjct: 851 ELQKLYVRACRGLEYVPRGIENLINLQELHL 881
>sp|Q80U72|SCRIB_MOUSE Protein scribble homolog OS=Mus musculus GN=Scrib PE=1 SV=2
Length = 1612
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 4 AKLTRLEIYDCKRLEALPKGLHNLTSLQELKIGGELPSLEED--GLPTNLHSLWIDGNK 60
A L LE+ + L++LP L L L++L +GG + D G NL LW+D N+
Sbjct: 151 ANLVTLELRE-NLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQ 208
>sp|O22698|FBK24_ARATH Putative F-box/kelch-repeat protein At1g60570 OS=Arabidopsis
thaliana GN=At1g60570 PE=4 SV=1
Length = 381
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 55 WIDGNKKIWKSMIERGRGFHRFSSLRHLTISGCDDDMVSFPPELKYFPEKGLPSSLLQLW 114
W D + W+S++ R H+F +T++ MV F + F G +
Sbjct: 280 WYDTKARTWRSLLNGMRELHKFVRHASVTLADYGGKMVMFWDK---FVASGDGLGFHKTM 336
Query: 115 IWGCPLIAEKCRKDGGQYW 133
+W C +IA + R D G+ W
Sbjct: 337 MW-CAMIALE-RSDSGEIW 353
>sp|Q9RBS2|POPC_RALSO Protein PopC OS=Ralstonia solanacearum (strain GMI1000) GN=popC
PE=4 SV=2
Length = 1024
Score = 30.8 bits (68), Expect = 3.9, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 6 LTRLEIYDCKRLEALPKGLHNLTSLQELKIGG----ELPSLEEDGLPTNLHSLWID 57
L L + D +L +LP L+ LQEL + G ELPS+ G ++L +L +D
Sbjct: 430 LKTLSLQDNPKLGSLPASFGQLSGLQELTLNGNRIHELPSM---GGASSLQTLTVD 482
>sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4
Length = 1630
Score = 30.8 bits (68), Expect = 4.0, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 4 AKLTRLEIYDCKRLEALPKGLHNLTSLQELKIGGELPSLEED--GLPTNLHSLWIDGNK 60
A L LE+ + L++LP L L L++L +GG + D G NL LW+D N+
Sbjct: 151 ANLVTLELRE-NLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQ 208
>sp|Q9SX38|DRL4_ARATH Putative disease resistance protein At1g50180 OS=Arabidopsis
thaliana GN=At1g50180 PE=3 SV=2
Length = 857
Score = 30.8 bits (68), Expect = 4.0, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 5 KLTRLEIYDCKRLEALPKGLHNLTSLQELKIGGELPSLEE 44
+L +E+ C +L+++P+G L +LQE++IG + ++
Sbjct: 793 RLVTVELKCCNKLKSVPEGTRFLKNLQEVEIGNRTKAFKD 832
>sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase
At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3
Length = 1045
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 4 AKLTRLEIYDCKRLEALPKGLHNLTSLQEL-----KIGGELPSLEEDGLPTNLHSLWIDG 58
K+T + IYD +P NLT L L + G +PS E LP NL L +D
Sbjct: 190 TKVTEIAIYDNLLTGPIPSSFGNLTKLVNLYLFINSLSGSIPS-EIGNLP-NLRELCLDR 247
Query: 59 NKKIWKSMIERGRGFHRFSSLRHLTISGCDDDMVS--FPPEL 98
N G+ F +L+++T+ ++ +S PPE+
Sbjct: 248 NNLT-------GKIPSSFGNLKNVTLLNMFENQLSGEIPPEI 282
>sp|P51885|LUM_MOUSE Lumican OS=Mus musculus GN=Lum PE=1 SV=2
Length = 338
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 18 EALPKGLHNLTSLQELKIGGELPSLEEDGLPTNLHSLWIDGNKKIWKSMIERGRGFHRFS 77
+A+ L L SL+ L + S GLPT+L +L++D NK S I F RF+
Sbjct: 174 DAVSASLKGLKSLEYLDLSFNQMSKLPAGLPTSLLTLYLDNNK---ISNIP-DEYFKRFT 229
Query: 78 SLRHLTIS 85
L++L +S
Sbjct: 230 GLQYLRLS 237
>sp|Q67JG9|TILS_SYMTH tRNA(Ile)-lysidine synthase OS=Symbiobacterium thermophilum (strain
T / IAM 14863) GN=tilS PE=3 SV=1
Length = 482
Score = 30.4 bits (67), Expect = 5.2, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 21 PKGLHNLTSLQELKIGGELPSLEEDGLPTNLHSLWIDGNKKIWKSMIERGRGF 73
P G+ LQ++ + ++P + DGLP L + G+ +W + R R F
Sbjct: 411 PAGMQGSKKLQDILVDAKVPRDQRDGLP-----LLVAGDTVVWVPGVIRDRRF 458
>sp|Q05443|LUM_BOVIN Lumican OS=Bos taurus GN=LUM PE=1 SV=1
Length = 342
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 18 EALPKGLHNLTSLQELKIGGELPSLEEDGLPTNLHSLWIDGNKKIWKSMIERGRGFHRFS 77
+A+ L L SL+ L + + GLP +L +L++D NK S I F RFS
Sbjct: 178 DAVSAALKGLKSLEYLDLSFNQMTKLPSGLPVSLLTLYLDNNK---ISNIP-DEYFKRFS 233
Query: 78 SLRHLTIS 85
+L++L +S
Sbjct: 234 ALQYLRLS 241
>sp|Q7KRY7|LAP4_DROME Protein lap4 OS=Drosophila melanogaster GN=scrib PE=1 SV=1
Length = 1851
Score = 30.0 bits (66), Expect = 6.0, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 6 LTRLEIYDCKR--LEALPKGLHNLTSLQELKIG-GELPSLEED-GLPTNLHSLWIDGNK 60
LT+LE + + L+ LP+ + LT L+ L +G E+ L G LH LW+D N+
Sbjct: 151 LTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 4 AKLTRLEIYDCKRLEALPKGLHNLTSLQELKIGG 37
KL L++ DCK+LE+ P L NL SL+ L + G
Sbjct: 660 TKLIYLDMSDCKKLESFPTDL-NLESLEYLNLTG 692
Score = 29.6 bits (65), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 5 KLTRLEIYDCKRLEALPKGLHNLTSLQELKIGG 37
+L RLE+ +C LE LP + NL+SL+ L + G
Sbjct: 821 RLVRLEMKECTGLEVLPTDV-NLSSLETLDLSG 852
>sp|D0ZVG2|SSPH1_SALT1 E3 ubiquitin-protein ligase sspH1 OS=Salmonella typhimurium (strain
14028s / SGSC 2262) GN=sspH1 PE=1 SV=1
Length = 700
Score = 29.6 bits (65), Expect = 8.2, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 53/140 (37%), Gaps = 33/140 (23%)
Query: 17 LEALPKGLHNLTSLQELKIGGELPSLEEDGLPTNLHSLWIDGNKKIWKSMIERGRGFHRF 76
L LP+GL +EL++ G L LP L LW N + G G
Sbjct: 231 LPELPEGL------RELEVSGNLQLTSLPSLPQGLQKLWAYNNWLASLPTLPPGLGDLAV 284
Query: 77 S------------SLRHLTISGCDDDMVSFPPELKYFPEKGLPSSLLQLWIWGCPLIAEK 124
S +LR L +SG +++ S P LPS L +LW + L +
Sbjct: 285 SNNQLTSLPEMPPALRELRVSG--NNLTSLP---------ALPSGLQKLWAYNNRLTSLP 333
Query: 125 CRKDGGQYWDL----LTHIP 140
G Q D+ LT +P
Sbjct: 334 EMSPGLQELDVSHNQLTRLP 353
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.140 0.461
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,435,685
Number of Sequences: 539616
Number of extensions: 3007037
Number of successful extensions: 5384
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 5341
Number of HSP's gapped (non-prelim): 66
length of query: 157
length of database: 191,569,459
effective HSP length: 108
effective length of query: 49
effective length of database: 133,290,931
effective search space: 6531255619
effective search space used: 6531255619
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)