Your job contains 1 sequence.
>040718
MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS
LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD
FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQ
TMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGG
GSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNL
VQPSNIRGIVSSSSCYVDPLYYFGRLCRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGR
SAKVDRKRRRTAEVGVLGVHMSKVDALRRARRGAKLARSESSD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040718
(403 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2015939 - symbol:AT1G27410 "AT1G27410" species... 529 2.0e-102 2
UNIPROTKB|F1NF26 - symbol:DCLRE1B "5' exonuclease Apollo"... 277 1.6e-43 3
ZFIN|ZDB-GENE-061013-328 - symbol:dclre1b "DNA cross-link... 301 3.7e-42 3
RGD|1310343 - symbol:Dclre1b "DNA cross-link repair 1B" s... 292 1.4e-41 3
UNIPROTKB|D2H8V8 - symbol:DCLRE1B "5' exonuclease Apollo"... 292 3.7e-41 3
MGI|MGI:2156057 - symbol:Dclre1b "DNA cross-link repair 1... 293 5.8e-41 3
UNIPROTKB|E2RLH4 - symbol:DCLRE1B "Uncharacterized protei... 291 7.8e-40 3
UNIPROTKB|Q9H816 - symbol:DCLRE1B "5' exonuclease Apollo"... 285 8.4e-40 3
UNIPROTKB|E1BFI5 - symbol:DCLRE1B "Uncharacterized protei... 284 1.7e-39 3
UNIPROTKB|F1SBR3 - symbol:DCLRE1B "Uncharacterized protei... 274 4.1e-39 3
UNIPROTKB|Q5QJC3 - symbol:DCLRE1B "5' exonuclease Apollo"... 247 1.1e-35 3
TAIR|locus:2090832 - symbol:SNM1 "SENSITIVE TO NITROGEN M... 178 6.2e-18 2
TAIR|locus:2043689 - symbol:AT2G45700 species:3702 "Arabi... 185 2.5e-17 3
UNIPROTKB|F1NW11 - symbol:DCLRE1C "Protein artemis" speci... 202 1.3e-15 2
UNIPROTKB|Q5QJC2 - symbol:DCLRE1C "Protein artemis" speci... 202 1.3e-15 2
DICTYBASE|DDB_G0277755 - symbol:dclre1 "DNA repair metall... 185 3.0e-15 3
RGD|708574 - symbol:Dclre1c "DNA cross-link repair 1C" sp... 194 4.2e-15 2
UNIPROTKB|E2RBE9 - symbol:DCLRE1C "Uncharacterized protei... 193 4.2e-15 2
UNIPROTKB|A6QLL4 - symbol:DCLRE1C "Uncharacterized protei... 197 6.3e-15 2
UNIPROTKB|A8J921 - symbol:CHLREDRAFT_176829 "Predicted pr... 185 1.7e-14 3
MGI|MGI:2441769 - symbol:Dclre1c "DNA cross-link repair 1... 189 2.7e-14 2
TAIR|locus:505006131 - symbol:AT1G19025 "AT1G19025" speci... 190 4.7e-14 2
UNIPROTKB|Q96SD1 - symbol:DCLRE1C "Protein artemis" speci... 193 5.8e-14 2
UNIPROTKB|E1BN11 - symbol:DCLRE1A "Uncharacterized protei... 173 1.6e-13 2
MGI|MGI:1930042 - symbol:Dclre1a "DNA cross-link repair 1... 174 2.4e-13 2
ASPGD|ASPL0000068746 - symbol:AN10962 species:162425 "Eme... 186 1.1e-12 2
UNIPROTKB|F1RW83 - symbol:DCLRE1C "Uncharacterized protei... 175 1.7e-12 2
SGD|S000004745 - symbol:PSO2 "Nuclease required for DNA s... 174 2.5e-12 2
UNIPROTKB|E2QZ29 - symbol:DCLRE1A "Uncharacterized protei... 158 1.3e-11 2
RGD|1306156 - symbol:Dclre1a "DNA cross-link repair 1A" s... 164 1.7e-11 2
ZFIN|ZDB-GENE-050522-124 - symbol:dclre1a "DNA cross-link... 156 3.0e-11 2
UNIPROTKB|Q6PJP8 - symbol:DCLRE1A "DNA cross-link repair ... 156 4.3e-11 2
WB|WBGene00045237 - symbol:mrt-1 species:6239 "Caenorhabd... 114 4.3e-11 3
UNIPROTKB|I3LAK7 - symbol:DCLRE1A "Uncharacterized protei... 156 5.6e-11 2
UNIPROTKB|I3LLR2 - symbol:DCLRE1A "Uncharacterized protei... 156 6.8e-11 2
UNIPROTKB|F1S5H8 - symbol:DCLRE1A "Uncharacterized protei... 156 7.0e-11 2
ZFIN|ZDB-GENE-041210-72 - symbol:dclre1c "DNA cross-link ... 166 1.0e-10 3
UNIPROTKB|F1NC75 - symbol:DCLRE1A "DNA cross-link repair ... 153 2.6e-10 2
UNIPROTKB|Q5QJC4 - symbol:DCLRE1A "DNA cross-link repair ... 153 2.6e-10 2
FB|FBgn0037338 - symbol:Snm1 "Snm1" species:7227 "Drosoph... 154 1.5e-09 2
POMBASE|SPAC22A12.01c - symbol:pso2 "DNA 5' exonuclease (... 144 5.4e-08 2
GENEDB_PFALCIPARUM|PF14_0711 - symbol:PF14_0711 "hypothet... 116 4.7e-06 3
UNIPROTKB|Q8IK95 - symbol:PF14_0711 "DNA repair metallo-b... 116 4.7e-06 3
CGD|CAL0004348 - symbol:PSO2 species:5476 "Candida albica... 127 2.0e-05 2
UNIPROTKB|Q5A5N8 - symbol:PSO2 "Putative uncharacterized ... 127 2.0e-05 2
CGD|CAL0005993 - symbol:orf19.2926 species:5476 "Candida ... 76 3.1e-05 4
>TAIR|locus:2015939 [details] [associations]
symbol:AT1G27410 "AT1G27410" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC004557
eggNOG:COG1236 InterPro:IPR011084 Pfam:PF07522 KO:K15341
EMBL:AY065116 EMBL:AY081629 IPI:IPI00538938 PIR:E86399
RefSeq:NP_174061.1 UniGene:At.28586 ProteinModelPortal:Q9FZJ4
SMR:Q9FZJ4 PRIDE:Q9FZJ4 EnsemblPlants:AT1G27410.1 GeneID:839631
KEGG:ath:AT1G27410 TAIR:At1g27410 HOGENOM:HOG000082912
InParanoid:Q9FZJ4 OMA:MAIDAHH PhylomeDB:Q9FZJ4
ProtClustDB:CLSN2682886 Genevestigator:Q9FZJ4 Uniprot:Q9FZJ4
Length = 422
Score = 529 (191.3 bits), Expect = 2.0e-102, Sum P(2) = 2.0e-102
Identities = 99/172 (57%), Positives = 122/172 (70%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
ME GLISVDRW GSQ YFLTH+HSDHT+GLS W++GPL+CSR TA LFP +FPG DLS
Sbjct: 1 MESGLISVDRWRNGSQAYFLTHIHSDHTRGLSGGWSQGPLYCSRTTASLFPSRFPGFDLS 60
Query: 61 LIRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
L+RV+ + G + ++AIDA+HCPG S+M LFRGDFGC LYTGD
Sbjct: 61 LLRVVPLFSWTSLSLRSPSSGSTVRLHLMAIDAHHCPG----SIMFLFRGDFGCFLYTGD 116
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
FRW++ + ++ R TLV A+ + VDILYLDNTYCN Y+FPSR VA Q +
Sbjct: 117 FRWDS--DASDEARTTLVAAIDEFPVDILYLDNTYCNPIYSFPSRLVAVQLV 166
Score = 506 (183.2 bits), Expect = 2.0e-102, Sum P(2) = 2.0e-102
Identities = 103/163 (63%), Positives = 117/163 (71%)
Query: 171 QIWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGL 230
+IWVWPERL+TMHLLGF DIFTT TSLTRVRAVPRYSFSI TLE LNTM PTIGIMPSGL
Sbjct: 201 KIWVWPERLRTMHLLGFQDIFTTDTSLTRVRAVPRYSFSIQTLEGLNTMCPTIGIMPSGL 260
Query: 231 PWVVXXXXXXXXXXXXXXXXYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSC 290
PWV S T + E L+ A +V +FH Y+YSV YSDHSC
Sbjct: 261 PWVKRPFKGDDKLSGSFLTA--SMKNETVSAKKE-LEAA--AVHKFHDYMYSVHYSDHSC 315
Query: 291 FTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLCRANQPP 333
+ EI EF+ LV+P +++GIV SSS YVDPLYYFGR+C ANQPP
Sbjct: 316 YEEIGEFIKLVKPKSMKGIVVSSSSYVDPLYYFGRICGANQPP 358
>UNIPROTKB|F1NF26 [details] [associations]
symbol:DCLRE1B "5' exonuclease Apollo" species:9031 "Gallus
gallus" [GO:0000075 "cell cycle checkpoint" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0008409 "5'-3'
exonuclease activity" evidence=IEA] [GO:0031627 "telomeric loop
formation" evidence=IEA] [GO:0031848 "protection from
non-homologous end joining at telomere" evidence=IEA] [GO:0031860
"telomeric 3' overhang formation" evidence=IEA] InterPro:IPR001279
SMART:SM00849 GO:GO:0005813 GO:GO:0031848 GO:GO:0000781
GO:GO:0000075 GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GO:GO:0031860 GO:GO:0031627 IPI:IPI00585177
GeneTree:ENSGT00530000063183 OMA:MAIDAHH EMBL:AADN02045017
EMBL:AADN02045018 Ensembl:ENSGALT00000002953 Uniprot:F1NF26
Length = 459
Score = 277 (102.6 bits), Expect = 1.6e-43, Sum P(3) = 1.6e-43
Identities = 76/173 (43%), Positives = 97/173 (56%)
Query: 6 ISVDRWTE----GSQVYFLTHLHSDHTQGLSSAWARG-PLFCSRLTAKLF--PLKFPGLD 58
I+VD W+ G++++FL+H+HS+ T GLSS W+R PL+CS LTA+L LK P
Sbjct: 11 IAVDFWSVRRAGGARLFFLSHMHSEKTVGLSSTWSRPLPLYCSPLTARLLYHRLKVP--- 67
Query: 59 LSLIRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYT 118
IR L++G GE+ V V +DANHCPG SVM LF G FG +LYT
Sbjct: 68 TRWIRPLEVGQSHAV-------GEE--VTVTLLDANHCPG----SVMFLFEGAFGTILYT 114
Query: 119 GDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ 171
GDFR+ + +R AL +D LYLDNT C A PSR AA Q
Sbjct: 115 GDFRYSPAMQREP--------ALSGRRIDRLYLDNTNCRPHGALPSRSRAALQ 159
Score = 123 (48.4 bits), Expect = 1.6e-43, Sum P(3) = 1.6e-43
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 174 VWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLP 231
V P RL+ M LL ++FTT+ R+ AV DTL S N +HPTI I+P+G P
Sbjct: 198 VSPSRLEQMRLLELPEVFTTEEGAGRIHAVDVAEIRWDTLVSWNVLHPTIAILPTGRP 255
Score = 98 (39.6 bits), Expect = 1.6e-43, Sum P(3) = 1.6e-43
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 277 HKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCY 316
H I+ +PYSDHS F+E+ EF+ ++P ++ IV CY
Sbjct: 260 HPQIHLIPYSDHSSFSELCEFVKWLKPCSVIPIVKGDMCY 299
>ZFIN|ZDB-GENE-061013-328 [details] [associations]
symbol:dclre1b "DNA cross-link repair 1B"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=IEA;ISS]
[GO:0005813 "centrosome" evidence=ISS] [GO:0008409 "5'-3'
exonuclease activity" evidence=ISS] [GO:0031627 "telomeric loop
formation" evidence=ISS] [GO:0031848 "protection from
non-homologous end joining at telomere" evidence=ISS] [GO:0031860
"telomeric 3' overhang formation" evidence=ISS] [GO:0000075 "cell
cycle checkpoint" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] InterPro:IPR001279
SMART:SM00849 ZFIN:ZDB-GENE-061013-328 GO:GO:0005634 GO:GO:0005813
GO:GO:0006281 GO:GO:0031848 GO:GO:0000781 GO:GO:0000075
eggNOG:COG1236 GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GO:GO:0031860 GO:GO:0031627 CTD:64858 KO:K15341 OrthoDB:EOG43R3N5
EMBL:CT025875 EMBL:BC124809 IPI:IPI00806625 RefSeq:NP_001070751.1
UniGene:Dr.86618 ProteinModelPortal:B0V2S2 STRING:B0V2S2
Ensembl:ENSDART00000099692 GeneID:768137 KEGG:dre:768137
GeneTree:ENSGT00530000063183 HOGENOM:HOG000204482
HOVERGEN:HBG096227 InParanoid:Q08BA3 OMA:NHINIDV NextBio:20918457
Bgee:B0V2S2 Uniprot:B0V2S2
Length = 571
Score = 301 (111.0 bits), Expect = 3.7e-42, Sum P(3) = 3.7e-42
Identities = 76/172 (44%), Positives = 100/172 (58%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W +++FL+H+HSDHT GLSS W+ P++CS LTAKL LK +
Sbjct: 11 IAVDCWQLRKCLHVRLFFLSHMHSDHTCGLSSTWSHRPIYCSPLTAKLLRLKLQ-IKQKW 69
Query: 62 IRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L+IG E+ V +I DANHCPG +VM LF+G FG LYTGDF
Sbjct: 70 IRPLEIGQDHMLMLDDLGK-ERLTVNLI--DANHCPG----AVMFLFQGYFGTRLYTGDF 122
Query: 122 RWEASNERAEIGRNTLVKALKDDV-VDILYLDNTYCNSSYAFPSREVAAQQI 172
R+ S R V L++ + +D+LYLDNT C+ + A PSR+ A QQI
Sbjct: 123 RYTPSMLR--------VPCLQNHINIDVLYLDNTNCDPTRALPSRQQATQQI 166
Score = 100 (40.3 bits), Expect = 3.7e-42, Sum P(3) = 3.7e-42
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 177 ERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWV 233
ERL+T+ +L D+FTT + R+R V + S L + N + TI I+P+ P V
Sbjct: 207 ERLETLRVLQLPDVFTTDSGAGRIRVVNQSMISASNLMAWNKLQSTIAILPTSRPMV 263
Score = 92 (37.4 bits), Expect = 3.7e-42, Sum P(3) = 3.7e-42
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 277 HKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLCRANQPP 333
H +Y VPYSDHS + E+E+F++ + P ++ IV + C L YF L + P
Sbjct: 266 HPNVYVVPYSDHSSYQELEDFVSALSPISLVPIVGN--C----LPYFSSLLSPRKKP 316
>RGD|1310343 [details] [associations]
symbol:Dclre1b "DNA cross-link repair 1B" species:10116 "Rattus
norvegicus" [GO:0000075 "cell cycle checkpoint"
evidence=IEA;ISO;ISS] [GO:0000723 "telomere maintenance"
evidence=ISO;ISS] [GO:0000781 "chromosome, telomeric region"
evidence=IEA;ISO;ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA;ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA;ISO;ISS]
[GO:0031627 "telomeric loop formation" evidence=IEA;ISO;ISS]
[GO:0031848 "protection from non-homologous end joining at
telomere" evidence=IEA;ISO;ISS] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA;ISO;ISS] InterPro:IPR001279 SMART:SM00849
RGD:1310343 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0006281
GO:GO:0031848 GO:GO:0000781 GO:GO:0000075 eggNOG:COG1236
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 HOGENOM:HOG000043118
GO:GO:0031860 GO:GO:0031627 CTD:64858 HOVERGEN:HBG081419 KO:K15341
OrthoDB:EOG43R3N5 EMBL:BC098939 IPI:IPI00368893
RefSeq:NP_001020858.1 UniGene:Rn.39355 STRING:Q4KLY6 GeneID:310745
KEGG:rno:310745 UCSC:RGD:1310343 InParanoid:Q4KLY6 NextBio:662540
ArrayExpress:Q4KLY6 Genevestigator:Q4KLY6 Uniprot:Q4KLY6
Length = 541
Score = 292 (107.8 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
Identities = 76/171 (44%), Positives = 97/171 (56%)
Query: 6 ISVDRWT---EGS-QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ G+ +++FL+H+H DHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRLQ-VSKQW 68
Query: 62 IRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L+IG G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEIGESHVLLLDEI--GQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
R+ S + TL K + LYLDNT CN + PSR+ A QQI
Sbjct: 122 RYTPSMLKEPA--LTLGKQ-----IHTLYLDNTNCNPALVLPSRQEATQQI 165
Score = 101 (40.6 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 171 QIWVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPS 228
Q WV P+RL+ + LLG D+FT + R+ AV + N HPTI I P+
Sbjct: 198 QTWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDHMEICHSAMLQWNQTHPTIAIFPT 257
Score = 93 (37.8 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 277 HKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
H IYS+PYSDHS ++E+ F+ ++P + IV C
Sbjct: 265 HPSIYSIPYSDHSSYSELRAFVAALRPCQVVPIVREQPC 303
>UNIPROTKB|D2H8V8 [details] [associations]
symbol:DCLRE1B "5' exonuclease Apollo" species:9646
"Ailuropoda melanoleuca" [GO:0000075 "cell cycle checkpoint"
evidence=ISS] [GO:0000723 "telomere maintenance" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=ISS]
[GO:0005813 "centrosome" evidence=ISS] [GO:0008409 "5'-3'
exonuclease activity" evidence=ISS] [GO:0031627 "telomeric loop
formation" evidence=ISS] [GO:0031848 "protection from
non-homologous end joining at telomere" evidence=ISS] [GO:0031860
"telomeric 3' overhang formation" evidence=ISS] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0006281 GO:GO:0031848 GO:GO:0000781 GO:GO:0000075
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 EMBL:GL192586
HOGENOM:HOG000043118 OMA:KYLLTPV GO:GO:0031860 GO:GO:0031627
Uniprot:D2H8V8
Length = 529
Score = 292 (107.8 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 75/171 (43%), Positives = 99/171 (57%)
Query: 6 ISVDRWT---EGS-QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ GS +++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHLQ-VPKEW 68
Query: 62 IRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G G +T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPLDEI--GRETMT-VTLMDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
R+ S + + +K K + LYLDNT CN ++ PSR+ AA+QI
Sbjct: 122 RYTPS-----MLKEPALKLGKQ--IHTLYLDNTNCNPAWVLPSRQEAARQI 165
Score = 99 (39.9 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 171 QIWVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPS 228
Q WV P RL+ + LLG D+FT + R+ AV + N HPTI I+P+
Sbjct: 198 QTWVVLSPRRLELVQLLGLADVFTLEEKAGRIHAVDHMEICHSAMLHWNQTHPTIAILPT 257
Score = 90 (36.7 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 273 VDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ R H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 261 IHRSHPDIHIIPYSDHSSYSELRTFVAALKPCQVVPIVSRQPC 303
>MGI|MGI:2156057 [details] [associations]
symbol:Dclre1b "DNA cross-link repair 1B, PSO2 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000075 "cell cycle
checkpoint" evidence=ISO] [GO:0000723 "telomere maintenance"
evidence=ISO] [GO:0000781 "chromosome, telomeric region"
evidence=ISO;IDA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=ISA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008409 "5'-3'
exonuclease activity" evidence=ISO;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031627 "telomeric loop formation"
evidence=IMP] [GO:0031848 "protection from non-homologous end
joining at telomere" evidence=ISO;IMP] [GO:0031860 "telomeric 3'
overhang formation" evidence=IMP] InterPro:IPR001279 SMART:SM00849
MGI:MGI:2156057 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0031848 EMBL:CU210953 GO:GO:0000781 GO:GO:0000075
GO:GO:0006289 eggNOG:COG1236 GO:GO:0008409 InterPro:IPR011084
Pfam:PF07522 OMA:KYLLTPV GO:GO:0031860 GO:GO:0031627 CTD:64858
KO:K15341 OrthoDB:EOG43R3N5 GeneTree:ENSGT00530000063183
HOVERGEN:HBG081420 EMBL:AK046571 EMBL:AK049115 EMBL:AK084347
EMBL:AK134324 EMBL:AK137495 EMBL:AK138568 EMBL:AK154124
EMBL:BC011094 EMBL:BC067017 EMBL:BC125277 IPI:IPI00226917
IPI:IPI00403798 IPI:IPI00458408 RefSeq:NP_001020483.1
RefSeq:NP_598626.2 UniGene:Mm.374850 ProteinModelPortal:Q8C7W7
SMR:Q8C7W7 STRING:Q8C7W7 PRIDE:Q8C7W7 Ensembl:ENSMUST00000029435
Ensembl:ENSMUST00000063502 Ensembl:ENSMUST00000106832
Ensembl:ENSMUST00000106834 GeneID:140917 KEGG:mmu:140917
UCSC:uc008qtl.1 UCSC:uc008qtm.1 UCSC:uc008qto.1 InParanoid:B0V3P0
NextBio:370035 Bgee:Q8C7W7 Genevestigator:Q8C7W7
GermOnline:ENSMUSG00000027845 Uniprot:Q8C7W7
Length = 541
Score = 293 (108.2 bits), Expect = 5.8e-41, Sum P(3) = 5.8e-41
Identities = 75/171 (43%), Positives = 97/171 (56%)
Query: 6 ISVDRWT---EGS-QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ GS +++FLTH+H DHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQ-VSKHW 68
Query: 62 IRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPLDEI--GQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
R+ S + L+ + + LYLDNT CN + PSR+ A QQI
Sbjct: 122 RYTPSM----LKEPALILGKQ---IHTLYLDNTNCNPALVLPSRQEATQQI 165
Score = 96 (38.9 bits), Expect = 5.8e-41, Sum P(3) = 5.8e-41
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 173 WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPS 228
WV P+RL+ + LLG D+FT + R+ AV + N HPTI I P+
Sbjct: 200 WVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDHTEICHSAMLQWNQSHPTIAIFPT 257
Score = 91 (37.1 bits), Expect = 5.8e-41, Sum P(3) = 5.8e-41
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 277 HKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
H IY+VPYSDHS ++E+ F+ ++P + IV C
Sbjct: 265 HPSIYTVPYSDHSSYSELRAFVAALRPCQVVPIVHQKPC 303
>UNIPROTKB|E2RLH4 [details] [associations]
symbol:DCLRE1B "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001279 SMART:SM00849 GO:GO:0016787
InterPro:IPR011084 Pfam:PF07522 OMA:KYLLTPV
GeneTree:ENSGT00530000063183 EMBL:AAEX03010988 EMBL:AAEX03010989
Ensembl:ENSCAFT00000014735 Uniprot:E2RLH4
Length = 463
Score = 291 (107.5 bits), Expect = 7.8e-40, Sum P(3) = 7.8e-40
Identities = 75/171 (43%), Positives = 99/171 (57%)
Query: 6 ISVDRWT---EGS-QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ GS +++FL+H+HSDHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLVHRQLQ-VSKRW 68
Query: 62 IRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G G +T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPLDEI--GRETMT-VTLMDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
R+ S + + +K K + LYLDNT CN + PSR+ AA+QI
Sbjct: 122 RYTPS-----MLKEPALKLGKQ--IHTLYLDNTNCNPARVLPSRQEAARQI 165
Score = 90 (36.7 bits), Expect = 7.8e-40, Sum P(3) = 7.8e-40
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 173 WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPS 228
WV P+RL+ + LLG ++FT + R+ AV + N HPTI I+P+
Sbjct: 200 WVVLSPQRLELVQLLGLANVFTVEEKAGRIHAVDHMEICRAAVLHWNQTHPTIAILPT 257
Score = 79 (32.9 bits), Expect = 7.8e-40, Sum P(3) = 7.8e-40
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 273 VDRFHKYIYSVPYSDHSCFTEIEEFLNLVQP 303
+ R H I+ +PYSDHS F+E++ F+ ++P
Sbjct: 261 IHRSHPDIHIIPYSDHSSFSELQTFVAALKP 291
>UNIPROTKB|Q9H816 [details] [associations]
symbol:DCLRE1B "5' exonuclease Apollo" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000075 "cell cycle
checkpoint" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000723 "telomere maintenance" evidence=IMP]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IDA] [GO:0031848
"protection from non-homologous end joining at telomere"
evidence=IMP] [GO:0031860 "telomeric 3' overhang formation"
evidence=ISS] [GO:0031627 "telomeric loop formation" evidence=ISS]
InterPro:IPR001279 SMART:SM00849 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0006281 GO:GO:0031848 EMBL:AL137856
GO:GO:0000781 GO:GO:0000075 eggNOG:COG1236 GO:GO:0008409
InterPro:IPR011084 Pfam:PF07522 HOGENOM:HOG000043118 OMA:KYLLTPV
GO:GO:0031860 GO:GO:0031627 CTD:64858 KO:K15341 OrthoDB:EOG43R3N5
EMBL:AK022872 EMBL:AK024060 EMBL:AY849379 EMBL:BC029687
IPI:IPI00010223 RefSeq:NP_073747.1 UniGene:Hs.591412 PDB:3BUA
PDB:3ZDK PDBsum:3BUA PDBsum:3ZDK ProteinModelPortal:Q9H816
SMR:Q9H816 DIP:DIP-42669N IntAct:Q9H816 MINT:MINT-3372972
STRING:Q9H816 PhosphoSite:Q9H816 DMDM:73620756 PaxDb:Q9H816
PRIDE:Q9H816 DNASU:64858 Ensembl:ENST00000369563 GeneID:64858
KEGG:hsa:64858 UCSC:uc001eeg.3 GeneCards:GC01P114447
HGNC:HGNC:17641 MIM:300240 MIM:609683 neXtProt:NX_Q9H816
PharmGKB:PA27175 HOVERGEN:HBG081420 InParanoid:Q9H816
PhylomeDB:Q9H816 EvolutionaryTrace:Q9H816 GenomeRNAi:64858
NextBio:67007 Bgee:Q9H816 CleanEx:HS_DCLRE1B Genevestigator:Q9H816
GermOnline:ENSG00000118655 Uniprot:Q9H816
Length = 532
Score = 285 (105.4 bits), Expect = 8.4e-40, Sum P(3) = 8.4e-40
Identities = 74/171 (43%), Positives = 97/171 (56%)
Query: 6 ISVDRWT---EGS-QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ G+ +++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQ-VSKQW 68
Query: 62 IRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+ L++G G++T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IQALEVGESHVLPLDEI--GQETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
R+ S + TL K + LYLDNT CN + PSR+ AA QI
Sbjct: 122 RYTPSMLKEPA--LTLGKQ-----IHTLYLDNTNCNPALVLPSRQEAAHQI 165
Score = 100 (40.3 bits), Expect = 8.4e-40, Sum P(3) = 8.4e-40
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 171 QIWVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPS 228
Q WV P RL+ + LLG D+FT + R+ AV + N HPTI I+P+
Sbjct: 198 QTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDHMEICHSNMLRWNQTHPTIAILPT 257
Score = 84 (34.6 bits), Expect = 8.4e-40, Sum P(3) = 8.4e-40
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 277 HKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 265 HPDIHVIPYSDHSSYSELRAFVAALKPCQVVPIVSRRPC 303
Score = 56 (24.8 bits), Expect = 3.2e-35, Sum P(3) = 3.2e-35
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 176 PERLQTMHLLGFHDIFTTKTSLTRVRAVP----------RYSFS------IDTLESLNTM 219
P RL+ + LLG D+FT + R+ AV R++ + + T +++
Sbjct: 205 PRRLELVQLLGLADVFTVEEKAGRIHAVDHMEICHSNMLRWNQTHPTIAILPTSRKIHSS 264
Query: 220 HPTIGIMP 227
HP I ++P
Sbjct: 265 HPDIHVIP 272
>UNIPROTKB|E1BFI5 [details] [associations]
symbol:DCLRE1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031860 "telomeric 3' overhang formation" evidence=IEA]
[GO:0031848 "protection from non-homologous end joining at
telomere" evidence=IEA] [GO:0031627 "telomeric loop formation"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000075 "cell
cycle checkpoint" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0005813 GO:GO:0031848 GO:GO:0000781 GO:GO:0000075
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 OMA:KYLLTPV
GO:GO:0031860 GO:GO:0031627 GeneTree:ENSGT00530000063183
EMBL:DAAA02007479 IPI:IPI00700462 Ensembl:ENSBTAT00000004713
Uniprot:E1BFI5
Length = 541
Score = 284 (105.0 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 75/171 (43%), Positives = 95/171 (55%)
Query: 6 ISVDRWT---EGS-QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ GS +++FLTH+HSDHT GL+S W R PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGSARLFFLTHMHSDHTVGLTSTWTR-PLYCSPITAYLLHRHLQ-VSKQW 68
Query: 62 IRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G G +T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPLDEV--GRETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
R+ S + R L K + LYLDNT CN PS+E AA+QI
Sbjct: 122 RYTPSMLKEPALR--LGKQ-----IHTLYLDNTNCNPDLVLPSQEEAARQI 165
Score = 100 (40.3 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 171 QIWVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPS 228
Q WV P RL+ + LLG D+FT + R+ AV + N HPTI I+P+
Sbjct: 198 QTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDHMEICHSAMLRWNQTHPTIAILPT 257
Score = 83 (34.3 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 275 RFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
R H I+ +PYSDHS ++E+ F+ ++P + IV C
Sbjct: 263 RSHPNIHVIPYSDHSSYSELRVFVAALKPCQVVPIVRRQPC 303
>UNIPROTKB|F1SBR3 [details] [associations]
symbol:DCLRE1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031860 "telomeric 3' overhang formation" evidence=IEA]
[GO:0031848 "protection from non-homologous end joining at
telomere" evidence=IEA] [GO:0031627 "telomeric loop formation"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000075 "cell
cycle checkpoint" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0005813 GO:GO:0031848 GO:GO:0000781 GO:GO:0000075
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 OMA:KYLLTPV
GO:GO:0031860 GO:GO:0031627 KO:K15341 GeneTree:ENSGT00530000063183
EMBL:CU651648 RefSeq:XP_003125885.1 UniGene:Ssc.61003
Ensembl:ENSSSCT00000007407 GeneID:100516672 KEGG:ssc:100516672
Uniprot:F1SBR3
Length = 537
Score = 274 (101.5 bits), Expect = 4.1e-39, Sum P(3) = 4.1e-39
Identities = 71/171 (41%), Positives = 97/171 (56%)
Query: 6 ISVDRWT---EG-SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ G ++++FL+H+HSDHT GLSS W R P++CS +TA L +
Sbjct: 11 IAVDFWSLRRAGCARLFFLSHMHSDHTVGLSSTWCR-PVYCSPITAYLLHRHLQ-VSKQW 68
Query: 62 IRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G G +T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHILPLDEV--GRETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
R+ S + + ++ K + LYLDNT CN + PS++ AA+QI
Sbjct: 122 RFTPS-----MLKEPALQLGKP--IHTLYLDNTNCNPALVLPSQQEAARQI 165
Score = 99 (39.9 bits), Expect = 4.1e-39, Sum P(3) = 4.1e-39
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 171 QIWVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPS 228
Q WV P RL+ + LLG D+FT + R+ AV + N HPTI I+P+
Sbjct: 198 QTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDHMEICRSAVLRWNQTHPTIAILPT 257
Score = 91 (37.1 bits), Expect = 4.1e-39, Sum P(3) = 4.1e-39
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 275 RFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
R H I+ +PYSDHS F+E+ F+ ++P + IVS C
Sbjct: 263 RSHPDIHIIPYSDHSSFSELRAFVAALRPCQVVPIVSRQPC 303
>UNIPROTKB|Q5QJC3 [details] [associations]
symbol:DCLRE1B "5' exonuclease Apollo" species:9031 "Gallus
gallus" [GO:0006281 "DNA repair" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005813 "centrosome" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=ISS]
[GO:0008409 "5'-3' exonuclease activity" evidence=ISS] [GO:0031848
"protection from non-homologous end joining at telomere"
evidence=ISS] [GO:0000723 "telomere maintenance" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=ISS] [GO:0031860
"telomeric 3' overhang formation" evidence=ISS] [GO:0031627
"telomeric loop formation" evidence=ISS] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 GO:GO:0005813 GO:GO:0006281
GO:GO:0031848 GO:GO:0000781 GO:GO:0000075 eggNOG:COG1236
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 HOGENOM:HOG000043118
GO:GO:0031860 GO:GO:0031627 EMBL:AY376897 IPI:IPI00585177
RefSeq:NP_001026671.2 UniGene:Gga.12786 ProteinModelPortal:Q5QJC3
STRING:Q5QJC3 GeneID:428269 KEGG:gga:428269 CTD:64858
HOVERGEN:HBG081419 InParanoid:Q5QJC3 KO:K15341 OrthoDB:EOG43R3N5
NextBio:20829309 Uniprot:Q5QJC3
Length = 457
Score = 247 (92.0 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 61/130 (46%), Positives = 80/130 (61%)
Query: 6 ISVDRWTE----GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFP--LKFPGLDL 59
I+VD W+ G++++FL+H+HSDHT GLSS W+R PL+CS LTA+L LK P
Sbjct: 11 IAVDFWSVRRAGGARLFFLSHMHSDHTVGLSSTWSR-PLYCSPLTARLLHHRLKVP---T 66
Query: 60 SLIRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTG 119
IR L++G GE+ V V +DANHCPG SVM LF G FG +LYTG
Sbjct: 67 RWIRPLEVGQSHAV-------GEE--VTVTLLDANHCPG----SVMFLFEGAFGTILYTG 113
Query: 120 DFRWEASNER 129
DFR+ + +R
Sbjct: 114 DFRYSPAMQR 123
Score = 170 (64.9 bits), Expect = 6.2e-25, Sum P(3) = 6.2e-25
Identities = 44/91 (48%), Positives = 51/91 (56%)
Query: 81 GEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA 140
GE+ V V +DANHCPG SVM LF G FG +LYTGDFR+ + +R A
Sbjct: 81 GEE--VTVTLLDANHCPG----SVMFLFEGAFGTILYTGDFRYSPAMQREP--------A 126
Query: 141 LKDDVVDILYLDNTYCNSSYAFPSREVAAQQ 171
L +D LYLDNT C A PSR AA Q
Sbjct: 127 LSGRRIDRLYLDNTNCRPHGALPSRSRAALQ 157
Score = 123 (48.4 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 174 VWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLP 231
V P RL+ M LL ++FTT+ R+ AV DTL S N +HPTI I+P+G P
Sbjct: 196 VSPSRLEQMRLLELPEVFTTEEGAGRIHAVDVAEIRWDTLVSWNVLHPTIAILPTGRP 253
Score = 98 (39.6 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 277 HKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCY 316
H I+ +PYSDHS F+E+ EF+ ++P ++ IV CY
Sbjct: 258 HPQIHLIPYSDHSSFSELCEFVKWLKPCSVIPIVKGDMCY 297
>TAIR|locus:2090832 [details] [associations]
symbol:SNM1 "SENSITIVE TO NITROGEN MUSTARD 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006281 GO:GO:0016787 eggNOG:COG1236 KO:K15340
InterPro:IPR011084 Pfam:PF07522 EMBL:X98130 EMBL:AB026648
UniGene:At.21140 UniGene:At.43974 EMBL:X97827 EMBL:AK117422
EMBL:BT005000 IPI:IPI00516333 RefSeq:NP_001030773.1
RefSeq:NP_189302.1 RefSeq:NP_850635.1 ProteinModelPortal:Q38961
SMR:Q38961 STRING:Q38961 EnsemblPlants:AT3G26680.1
EnsemblPlants:AT3G26680.2 EnsemblPlants:AT3G26680.3 GeneID:822280
KEGG:ath:AT3G26680 GeneFarm:5058 TAIR:At3g26680
HOGENOM:HOG000030842 InParanoid:Q38961 OMA:AALIHFR PhylomeDB:Q38961
ProtClustDB:CLSN2684871 Genevestigator:Q38961 GermOnline:AT3G26680
Uniprot:Q38961
Length = 484
Score = 178 (67.7 bits), Expect = 6.2e-18, Sum P(2) = 6.2e-18
Identities = 42/110 (38%), Positives = 58/110 (52%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXX 72
+G YFLTH H+DH GL+ AW+ GP++CS LT++L L ++ S I L++
Sbjct: 167 QGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLLRLSL-SVNPSSIHPLELDVEYT 225
Query: 73 XXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFR 122
++V I+ANHCPG LL D C L+TGDFR
Sbjct: 226 ING----------IKVTLIEANHCPGAALIHFRLL---DGTCYLHTGDFR 262
Score = 136 (52.9 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 36/81 (44%), Positives = 46/81 (56%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDV 145
++V I+ANHCPG LL D C L+TGDFR AS + + + L L +
Sbjct: 229 IKVTLIEANHCPGAALIHFRLL---DGTCYLHTGDFR--ASKQ---MQTHPL---LFNQR 277
Query: 146 VDILYLDNTYCNSSYAFPSRE 166
V +LYLD TYCN Y FPS+E
Sbjct: 278 VHVLYLDTTYCNPRYKFPSKE 298
Score = 109 (43.4 bits), Expect = 6.2e-18, Sum P(2) = 6.2e-18
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 255 WRATGGTQTEKLKEALGSV---DRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVS 311
+R TG T +EK+ E L + R IY VPYS+HS FTE+ EF+ ++P I V+
Sbjct: 405 FRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVN 464
Query: 312 SSS 314
+ +
Sbjct: 465 NGN 467
>TAIR|locus:2043689 [details] [associations]
symbol:AT2G45700 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR001279
InterPro:IPR001660 PROSITE:PS50105 SMART:SM00454 SMART:SM00849
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016787
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 EMBL:AC003680 EMBL:AC004665
eggNOG:COG1236 KO:K15340 InterPro:IPR011084 Pfam:PF07522
HSSP:P39769 EMBL:BT005774 EMBL:BT006104 EMBL:AK228444
IPI:IPI00544610 PIR:T00883 RefSeq:NP_182094.1 UniGene:At.36606
ProteinModelPortal:O64649 SMR:O64649 PRIDE:O64649
EnsemblPlants:AT2G45700.1 GeneID:819178 KEGG:ath:AT2G45700
TAIR:At2g45700 HOGENOM:HOG000030436 InParanoid:O64649 OMA:TIIRYEV
PhylomeDB:O64649 ProtClustDB:CLSN2683367 ArrayExpress:O64649
Genevestigator:O64649 Uniprot:O64649
Length = 723
Score = 185 (70.2 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 45/113 (39%), Positives = 65/113 (57%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXXXXXXX 77
+FLTH H DH QGL+ +++ G ++CS +TAKL +K G+ ++VLD+G
Sbjct: 418 WFLTHFHLDHYQGLTKSFSHGKIYCSLVTAKLVNMKI-GIPWERLQVLDLGQKVNISG-- 474
Query: 78 XXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRW--EASN 127
++V DANHCPG S+M+LF G +L+TGDFR+ E SN
Sbjct: 475 --------IDVTCFDANHCPG----SIMILFEPANGKAVLHTGDFRYSEEMSN 515
Score = 134 (52.2 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 40/110 (36%), Positives = 58/110 (52%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTLVKALKDD 144
++V DANHCPG S+M+LF G +L+TGDFR+ S E + N L+ +
Sbjct: 475 IDVTCFDANHCPG----SIMILFEPANGKAVLHTGDFRY--SEEMS----NWLIGSH--- 521
Query: 145 VVDILYLDNTYCNSSYAFPSREVAAQQIW--VWPERL--QTMHLLGFHDI 190
+ L LD TYCN Y FP +E Q + + E +T+ L+G + I
Sbjct: 522 -ISSLILDTTYCNPQYDFPKQEAVIQFVVEAIQAEAFNPKTLFLIGSYTI 570
Score = 84 (34.6 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 258 TGGTQTEKLKEALGSVDRFHKYI-YSVPYSDHSCFTEIEEFLNLVQPSNI 306
TG T + K++ G + I Y VPYS+HS FTE++EF+ V P I
Sbjct: 653 TGWTSGKTKKKSPGRRLQQGTIIRYEVPYSEHSSFTELKEFVQKVSPEVI 702
Score = 55 (24.4 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 167 VAAQQIWVWPERLQTMHLLGFH--DI--FTTKTSLTRVRAVPRYSFS 209
V ++I++ P +L+ + LGF DI FT K + + VP ++ +
Sbjct: 582 VLREKIYINPAKLKLLECLGFSKDDIQWFTVKEEESHIHVVPLWTLA 628
>UNIPROTKB|F1NW11 [details] [associations]
symbol:DCLRE1C "Protein artemis" species:9031 "Gallus
gallus" [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA] [GO:0010212
"response to ionizing radiation" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0010212 GO:GO:0006310 GO:GO:0006302 GO:GO:0000723
GO:GO:0000014 GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 IPI:IPI00602543 OMA:MFRNMPD
EMBL:AADN02060984 Ensembl:ENSGALT00000022573 Uniprot:F1NW11
Length = 714
Score = 202 (76.2 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 60/175 (34%), Positives = 88/175 (50%)
Query: 6 ISVDRWTEGS---QVYFLTHLHSDHTQGLSSAWARG--------PLFCSRLTAKLFPL-- 52
+S+DR+ + + YFL+H H DH +GL + R L+CS +T +L
Sbjct: 14 LSIDRFDYDNLRARAYFLSHCHKDHMKGLRAPALRRRLQSSLKVKLYCSPVTKELLLTNS 73
Query: 53 KFPGLDLSLIRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
K+ + + I L++ GEK +EV + A HCPG SVM LF+G+
Sbjct: 74 KYAFWE-NHIAALEVETPTQISLVDETTGEKEDIEVTLLPAGHCPG----SVMFLFQGEN 128
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSS-YAFPSRE 166
G +LYTGDFR A E A + ++KD + +YLD T+C+ Y PSRE
Sbjct: 129 GTVLYTGDFRL-AKGEAARMELLHSGTSVKD--IQSVYLDTTFCDPRFYHIPSRE 180
Score = 65 (27.9 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 264 EKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV----SSSSCYVDP 319
E++K+ + R + Y +S HS ++EI +FL+ ++P N+ V S ++
Sbjct: 296 ERIKKT-NVIVRTGESTYRACFSFHSSYSEIMDFLSYIRPVNVYPNVLPVGGSEDKVMEI 354
Query: 320 LYYFGRLCRANQPPLRYK 337
L R R N P RYK
Sbjct: 355 LQPLCRSYRRNTEP-RYK 371
>UNIPROTKB|Q5QJC2 [details] [associations]
symbol:DCLRE1C "Protein artemis" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 GO:GO:0006281 GO:GO:0006310
GO:GO:0004527 GO:GO:0090305 GO:GO:0004519 eggNOG:COG1236
InterPro:IPR011084 Pfam:PF07522 EMBL:AY376898 IPI:IPI00602543
RefSeq:NP_001026765.1 UniGene:Gga.22874 ProteinModelPortal:Q5QJC2
STRING:Q5QJC2 GeneID:430764 KEGG:gga:430764 CTD:64421
HOGENOM:HOG000231568 HOVERGEN:HBG081421 InParanoid:Q5QJC2 KO:K10887
OrthoDB:EOG4894M0 NextBio:20830567 Uniprot:Q5QJC2
Length = 714
Score = 202 (76.2 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 59/175 (33%), Positives = 88/175 (50%)
Query: 6 ISVDRWTEGS---QVYFLTHLHSDHTQGLSSAWARG--------PLFCSRLTAKLFPL-- 52
+S+DR+ + + YFL+H H DH +GL + R L+CS +T +L
Sbjct: 14 LSIDRFDYDNLRARAYFLSHCHKDHMKGLRAPALRRRLQSSLKVKLYCSPVTKELLLTNS 73
Query: 53 KFPGLDLSLIRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
K+ + ++ L++ GEK +EV + A HCPG SVM LF+G+
Sbjct: 74 KYAFWENHIV-ALEVETPTQISLVDETTGEKEDIEVTLLPAGHCPG----SVMFLFQGEN 128
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSS-YAFPSRE 166
G +LYTGDFR A E A + ++KD + +YLD T+C+ Y PSRE
Sbjct: 129 GTVLYTGDFRL-AKGEAARMELLHSGTSVKD--IQSVYLDTTFCDPRFYHIPSRE 180
Score = 65 (27.9 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 264 EKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV----SSSSCYVDP 319
E++K+ + R + Y +S HS ++EI +FL+ ++P N+ V S ++
Sbjct: 296 ERIKKT-NVIVRTGESTYRACFSFHSSYSEIMDFLSYIRPVNVYPNVLPVGGSEDKVMEI 354
Query: 320 LYYFGRLCRANQPPLRYK 337
L R R N P RYK
Sbjct: 355 LQPLCRSYRRNTEP-RYK 371
>DICTYBASE|DDB_G0277755 [details] [associations]
symbol:dclre1 "DNA repair metallo-beta-lactamase
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008408 "3'-5' exonuclease activity" evidence=ISS] [GO:0006289
"nucleotide-excision repair" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;IC] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
dictyBase:DDB_G0277755 GO:GO:0005634 GenomeReviews:CM000151_GR
EMBL:AAFI02000022 GO:GO:0008408 GO:GO:0006289 eggNOG:COG1236
KO:K15340 InterPro:IPR011084 Pfam:PF07522 RefSeq:XP_642494.1
HSSP:Q9UPQ7 ProteinModelPortal:Q86KS1 EnsemblProtists:DDB0232254
GeneID:8621205 KEGG:ddi:DDB_G0277755 InParanoid:Q86KS1
Uniprot:Q86KS1
Length = 920
Score = 185 (70.2 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 52/161 (32%), Positives = 74/161 (45%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXXXXXXX 77
YFLTH HSDH G++ W+ G ++C+ T KL K G+D I +
Sbjct: 286 YFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKL-GVDQRYIVKCEWNKLI------ 338
Query: 78 XXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG------CLLYTGDFRWEASNERAE 131
E V+V +D+NHCPG ++ R G +L+TGDFR+ S
Sbjct: 339 ----EIQGVKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYP 394
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+ LK + LYLDNTYC+ Y FP + +Q+
Sbjct: 395 L--------LKGRTISKLYLDNTYCDPQYVFPPQPEIIKQV 427
Score = 79 (32.9 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 255 WRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
+R TG TQ +K ++ ++R YSV YS+HS F E+ + ++ +P+ I V S
Sbjct: 526 FRPTGWTQAKK---SITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDS 582
Score = 44 (20.5 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 191 FTTKTSLTRVRAVPR----YSFSIDTLESLNTMHP-TIGIMPSG 229
FTT +T RAV Y + L+S N + IG P+G
Sbjct: 487 FTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTG 530
>RGD|708574 [details] [associations]
symbol:Dclre1c "DNA cross-link repair 1C" species:10116 "Rattus
norvegicus" [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IEA;ISO] [GO:0000723
"telomere maintenance" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA;ISO] [GO:0006310 "DNA
recombination" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA;ISO] [GO:0010212 "response to ionizing radiation"
evidence=IEA;ISO] [GO:0030183 "B cell differentiation"
evidence=IEA;ISO] [GO:0051276 "chromosome organization"
evidence=ISO] RGD:708574 GO:GO:0005634 GO:GO:0010212 GO:GO:0006310
GO:GO:0030183 GO:GO:0006302 GO:GO:0090305 GO:GO:0000723
eggNOG:COG1236 GO:GO:0000014 GO:GO:0008409 InterPro:IPR011084
Pfam:PF07522 GeneTree:ENSGT00530000063183 CTD:64421
HOGENOM:HOG000231568 HOVERGEN:HBG081421 KO:K10887 OrthoDB:EOG4894M0
OMA:MFRNMPD EMBL:AF395746 EMBL:BC083546 IPI:IPI00209347
RefSeq:NP_671486.2 UniGene:Rn.204346 ProteinModelPortal:Q5XIX3
STRING:Q5XIX3 PhosphoSite:Q5XIX3 PRIDE:Q5XIX3
Ensembl:ENSRNOT00000021506 GeneID:259171 KEGG:rno:259171
UCSC:RGD:708574 InParanoid:Q5XIX3 NextBio:624222
ArrayExpress:Q5XIX3 Genevestigator:Q5XIX3
GermOnline:ENSRNOG00000015980 Uniprot:Q5XIX3
Length = 698
Score = 194 (73.4 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 61/178 (34%), Positives = 87/178 (48%)
Query: 6 ISVDRWTEGS---QVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLFPLKF 54
IS+DR+ + + YFL+H H DH +GL + + L +CS +T +L L
Sbjct: 14 ISIDRFDRENLKARAYFLSHCHKDHMKGLRAPSMKRRLECSLKVFLYCSPVTKELL-LTS 72
Query: 55 PGLDL--SLIRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
P + I ++I GEK V V + A HCPG SVM LF+G
Sbjct: 73 PKYKFWENRIIAIEIETPTQVSLVDEASGEKEEVVVTLLPAGHCPG----SVMFLFQGSN 128
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPSRE 166
G +LYTGDFR + E+ R L+ + +KD + +YLD T+C+ Y PSRE
Sbjct: 129 GTVLYTGDFRLA----KGEVSRMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPSRE 180
Score = 69 (29.3 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGR-LCRANQ 331
Y +S HS ++EI++FL+ + P N V VD + F + LCR++Q
Sbjct: 312 YRACFSFHSSYSEIKDFLSYICPVNAYPNVIPIGLTVDKVMDFLKPLCRSSQ 363
>UNIPROTKB|E2RBE9 [details] [associations]
symbol:DCLRE1C "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0030183 "B cell differentiation"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] [GO:0000014 "single-stranded
DNA specific endodeoxyribonuclease activity" evidence=IEA]
InterPro:IPR001279 SMART:SM00849 GO:GO:0010212 GO:GO:0006310
GO:GO:0030183 GO:GO:0006302 GO:GO:0000723 GO:GO:0000014
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 CTD:64421 KO:K10887 OMA:MFRNMPD
EMBL:AAEX03001258 RefSeq:XP_544251.2 ProteinModelPortal:E2RBE9
Ensembl:ENSCAFT00000007553 GeneID:487123 KEGG:cfa:487123
NextBio:20860765 Uniprot:E2RBE9
Length = 693
Score = 193 (73.0 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 62/175 (35%), Positives = 86/175 (49%)
Query: 6 ISVDRWTEGS---QVYFLTHLHSDHTQGLSS-AWARG-------PLFCSRLTAKLFPLKF 54
IS+DR+ + + YFL+H H DH +GL + A R L+CS +T +L L
Sbjct: 14 ISIDRFDRENLKARAYFLSHCHKDHMKGLRAPALKRRLECSLKVRLYCSPVTKELL-LTS 72
Query: 55 PGLDLSLIRVL--DIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
P R++ +I GEK + V + A HCPG SVM LF+G+
Sbjct: 73 PRYRFWEKRIISIEIETPTQIPLVDEASGEKEDIVVTLLPAGHCPG----SVMFLFQGNN 128
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSS-YAFPSRE 166
G +LYTGDFR A E A + +KD + +YLD T+C+ Y PSRE
Sbjct: 129 GTVLYTGDFRM-AKGEAARMELLHSGGRVKD--IQSVYLDTTFCDPKFYQIPSRE 180
Score = 70 (29.7 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGR-LCRANQ 331
Y +S HS ++EI++FLN + P N+ V +D + + LCR++Q
Sbjct: 312 YRACFSFHSSYSEIKDFLNYICPVNVYPNVIPIGTTLDKVVEILKPLCRSSQ 363
>UNIPROTKB|A6QLL4 [details] [associations]
symbol:DCLRE1C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030183 "B cell differentiation" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IEA] InterPro:IPR001279
SMART:SM00849 GO:GO:0010212 GO:GO:0006310 GO:GO:0030183
GO:GO:0006302 GO:GO:0000723 eggNOG:COG1236 GO:GO:0000014
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 CTD:64421 HOGENOM:HOG000231568
HOVERGEN:HBG081421 KO:K10887 OrthoDB:EOG4894M0 OMA:MFRNMPD
EMBL:DAAA02035537 EMBL:DAAA02035538 EMBL:BC148006 IPI:IPI00701939
RefSeq:NP_001093847.1 UniGene:Bt.59419 STRING:A6QLL4
Ensembl:ENSBTAT00000013484 GeneID:517886 KEGG:bta:517886
InParanoid:A6QLL4 NextBio:20872534 Uniprot:A6QLL4
Length = 710
Score = 197 (74.4 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 61/175 (34%), Positives = 85/175 (48%)
Query: 6 ISVDRWTEGS---QVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLFPLKF 54
IS+DR+ + + YFL+H H DH +GL + + L +CS +T +L L
Sbjct: 14 ISIDRFDRENLRARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVCLYCSPVTKELL-LTS 72
Query: 55 PGLDLSLIRV--LDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
P R+ ++I GEK + V + A HCPG SVM LF+G+
Sbjct: 73 PKYRFWEKRIVSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLFQGNN 128
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSY-AFPSRE 166
G +LYTGDFR A E A + +KD + +YLD T+CN Y PSRE
Sbjct: 129 GTVLYTGDFRL-AKGEAARMELLHSGGRVKD--IQSVYLDTTFCNPKYYQIPSRE 180
Score = 64 (27.6 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGR-LCRANQ 331
Y +S HS ++EI++FL+ + P N+ V +D + + LCR++Q
Sbjct: 312 YRACFSFHSSYSEIKDFLSYICPVNVYPNVIPLGTTMDKVKEILKPLCRSSQ 363
>UNIPROTKB|A8J921 [details] [associations]
symbol:CHLREDRAFT_176829 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0003910 "DNA ligase (ATP) activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005694
"chromosome" evidence=IBA] [GO:0006266 "DNA ligation" evidence=IBA]
[GO:0006273 "lagging strand elongation" evidence=IBA] [GO:0006289
"nucleotide-excision repair" evidence=IBA] InterPro:IPR012308
InterPro:IPR012309 InterPro:IPR012310 Pfam:PF01068 Pfam:PF04675
Pfam:PF04679 PROSITE:PS50160 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0003677 GO:GO:0006310 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0006289 eggNOG:COG1236
KO:K15340 InterPro:IPR011084 Pfam:PF07522 GO:GO:0006273
GO:GO:0003910 Gene3D:1.10.3260.10 SUPFAM:SSF117018 EMBL:DS496145
RefSeq:XP_001698007.1 ProteinModelPortal:A8J921
EnsemblPlants:EDO99592 GeneID:5723644 KEGG:cre:CHLREDRAFT_176829
Uniprot:A8J921
Length = 1384
Score = 185 (70.2 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 46/109 (42%), Positives = 60/109 (55%)
Query: 4 GLISVD--RWTE-GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
G ++VD R+ G + YFLTH HSDH GLS AW GP++CS LTA+L G+ +
Sbjct: 46 GAVTVDAFRYAHPGVKAYFLTHAHSDHYTGLSEAWCAGPVYCSELTARLVA-HLTGVSTA 104
Query: 61 LIRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFR 109
+R L +G + VEV +DANHCPG +V LLFR
Sbjct: 105 WLRPLPLGRPVVV---------EGLVEVTLVDANHCPG----AVQLLFR 140
Score = 64 (27.6 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 13/45 (28%), Positives = 28/45 (62%)
Query: 263 TEKLKEALGSV-DRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
T ++K ++ SV + ++ VPYS+HS + E+ E++ ++P +
Sbjct: 337 TYEMKRSVFSVHSKGALSVHLVPYSEHSSYPELLEYVKWLRPRQV 381
Score = 58 (25.5 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 149 LYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVP 204
++LD TYC + FP+++ A + ++ L H + +TK + R+ P
Sbjct: 217 VFLDTTYCQPKHTFPTQDEAVDYV---ASQIHERTGLRIH-VSSTKLDVLRLLLPP 268
>MGI|MGI:2441769 [details] [associations]
symbol:Dclre1c "DNA cross-link repair 1C, PSO2 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000014
"single-stranded DNA specific endodeoxyribonuclease activity"
evidence=ISO] [GO:0000723 "telomere maintenance" evidence=IMP]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=ISO] [GO:0010212 "response to ionizing radiation"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030183 "B cell differentiation" evidence=IMP] [GO:0051276
"chromosome organization" evidence=IMP] InterPro:IPR001279
SMART:SM00849 MGI:MGI:2441769 GO:GO:0005634 GO:GO:0010212
GO:GO:0006310 GO:GO:0030183 GO:GO:0006302 GO:GO:0000723
EMBL:AL732620 eggNOG:COG1236 GO:GO:0000014 GO:GO:0008409
InterPro:IPR011084 Pfam:PF07522 GeneTree:ENSGT00530000063183
CTD:64421 HOGENOM:HOG000231568 HOVERGEN:HBG081421 KO:K10887
OrthoDB:EOG4894M0 OMA:MFRNMPD EMBL:AF387731 EMBL:AK037126
EMBL:AK052369 EMBL:AK088810 IPI:IPI00170222 IPI:IPI00221500
IPI:IPI00607937 RefSeq:NP_001103684.1 RefSeq:NP_666226.2
RefSeq:NP_783614.1 UniGene:Mm.23483 UniGene:Mm.442710
ProteinModelPortal:Q8K4J0 SMR:Q8K4J0 STRING:Q8K4J0
PhosphoSite:Q8K4J0 PRIDE:Q8K4J0 Ensembl:ENSMUST00000061852
Ensembl:ENSMUST00000102988 Ensembl:ENSMUST00000115066 GeneID:227525
KEGG:mmu:227525 UCSC:uc008idz.2 UCSC:uc008iea.2 UCSC:uc008ieb.2
InParanoid:A2AJG6 NextBio:378619 Bgee:Q8K4J0 Genevestigator:Q8K4J0
Uniprot:Q8K4J0
Length = 705
Score = 189 (71.6 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 61/178 (34%), Positives = 86/178 (48%)
Query: 6 ISVDRWTEGS---QVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLFPLKF 54
IS+DR+ + + YFL+H H DH +GL + + L +CS +T +L L
Sbjct: 14 ISIDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELL-LTS 72
Query: 55 PGLDL--SLIRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
P + I ++I GEK V V + A HCPG SVM LF+G
Sbjct: 73 PKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPG----SVMFLFQGSN 128
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPSRE 166
G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PSRE
Sbjct: 129 GTVLYTGDFRLA----KGEASRMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPSRE 180
Score = 67 (28.6 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLY-YFGRLCRANQ 331
Y +S HS F+EI++FL+ + P N+ V VD + LCR+ Q
Sbjct: 312 YRACFSFHSSFSEIKDFLSYICPVNVYPNVIPVGLTVDKVMDVLKPLCRSPQ 363
Score = 37 (18.1 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 152 DNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSI 210
D+T+ +S + S + Q W + T+ L TSL + P+ SI
Sbjct: 544 DSTHISSQNSSQSTHITDQGSQGWDSQCDTVLLSSQEKSGGDSTSLNKGAYKPKLKESI 602
>TAIR|locus:505006131 [details] [associations]
symbol:AT1G19025 "AT1G19025" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 KO:K15340 InterPro:IPR011084
Pfam:PF07522 IPI:IPI00546684 RefSeq:NP_564070.1 UniGene:At.41767
UniGene:At.74256 ProteinModelPortal:F4IDZ7 SMR:F4IDZ7
EnsemblPlants:AT1G19025.1 GeneID:838484 KEGG:ath:AT1G19025
OMA:IRPSAQW Uniprot:F4IDZ7
Length = 549
Score = 190 (71.9 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 60/167 (35%), Positives = 87/167 (52%)
Query: 18 YFLTHLHSDHTQGLS-SAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXXXXXX 76
+FLTH H DHT G+S S P++ + LT L +FP LD S ++IG
Sbjct: 29 HFLTHAHKDHTVGVSPSNIVVFPIYSTSLTISLLLQRFPQLDESYFVRVEIGQSVIVDDP 88
Query: 77 XXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW--EASNERAE--I 132
GE +V A DANHCPG +VM LF G FG +L+TGD R + + E +
Sbjct: 89 D---GE---FKVTAFDANHCPG----AVMFLFEGSFGNILHTGDCRLTLDCLHSLPEKYV 138
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYA--FPSREVAAQQI--WVW 175
GR+ +K + ++LD T+ SS++ FP++ A +QI +W
Sbjct: 139 GRSHGMKPKCS--LGYIFLDCTFGKSSHSQRFPTKHSAIRQIINCIW 183
Score = 60 (26.2 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 252 QSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVS 311
+ W++ + K++ + D F ++ V YS HS E+E + L+ P + +VS
Sbjct: 288 EDDWKSGSIQKQRKVRFSEAVKDEFG--LWHVCYSMHSSRAELESAMQLLSP---KWVVS 342
Query: 312 S-SSCYVDPLYYFGRLC 327
+ SC L Y + C
Sbjct: 343 TVPSCRAMELNYVKKNC 359
>UNIPROTKB|Q96SD1 [details] [associations]
symbol:DCLRE1C "Protein artemis" species:9606 "Homo
sapiens" [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0010212 "response to ionizing
radiation" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000014
"single-stranded DNA specific endodeoxyribonuclease activity"
evidence=IDA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IDA] InterPro:IPR001279 SMART:SM00849 GO:GO:0005634
GO:GO:0010212 EMBL:CH471072 GO:GO:0006310 GO:GO:0030183
GO:GO:0006302 GO:GO:0000723 eggNOG:COG1236 GO:GO:0000014
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 CTD:64421
HOVERGEN:HBG081421 KO:K10887 EMBL:AJ296101 EMBL:AF395747
EMBL:AF395748 EMBL:AF395749 EMBL:AF395750 EMBL:AF395751
EMBL:AF395752 EMBL:AK021422 EMBL:DQ504427 EMBL:AL360083
EMBL:AC069544 EMBL:BC000863 EMBL:BC009185 EMBL:BC022254
IPI:IPI00290459 IPI:IPI00290918 IPI:IPI00396624 IPI:IPI00607742
RefSeq:NP_001029027.1 RefSeq:NP_001029029.1 RefSeq:NP_001029030.1
RefSeq:NP_071932.2 UniGene:Hs.656065 PDB:4HTP PDBsum:4HTP
ProteinModelPortal:Q96SD1 SMR:Q96SD1 STRING:Q96SD1
PhosphoSite:Q96SD1 DMDM:71153325 PaxDb:Q96SD1 PRIDE:Q96SD1
Ensembl:ENST00000357717 Ensembl:ENST00000378241
Ensembl:ENST00000378246 Ensembl:ENST00000378249
Ensembl:ENST00000378254 Ensembl:ENST00000378255
Ensembl:ENST00000378258 Ensembl:ENST00000378278
Ensembl:ENST00000378289 Ensembl:ENST00000396817
Ensembl:ENST00000418843 Ensembl:ENST00000453695
Ensembl:ENST00000456122 GeneID:64421 KEGG:hsa:64421 UCSC:uc001inl.3
UCSC:uc001ino.3 UCSC:uc010qbx.2 GeneCards:GC10M014939
HGNC:HGNC:17642 MIM:602450 MIM:603554 MIM:605988 neXtProt:NX_Q96SD1
Orphanet:39041 Orphanet:275 PharmGKB:PA27176 InParanoid:Q96SD1
OMA:RTRTIHR PhylomeDB:Q96SD1 GenomeRNAi:64421 NextBio:66403
ArrayExpress:Q96SD1 Bgee:Q96SD1 Genevestigator:Q96SD1
GermOnline:ENSG00000152457 Uniprot:Q96SD1
Length = 692
Score = 193 (73.0 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 60/175 (34%), Positives = 85/175 (48%)
Query: 6 ISVDRWTEGS---QVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLFPLKF 54
IS+DR+ + + YFL+H H DH +GL + + L +CS +T +L L
Sbjct: 14 ISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL-LTS 72
Query: 55 PGLDLSLIRVL--DIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
P R++ +I GEK + V + A HCPG SVM LF+G+
Sbjct: 73 PKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLFQGNN 128
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSS-YAFPSRE 166
G +LYTGDFR A E A + +KD + +YLD T+C+ Y PSRE
Sbjct: 129 GTVLYTGDFRL-AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPSRE 180
Score = 59 (25.8 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGR-LCRANQ 331
Y +S HS ++EI++FL+ + P N V +D + + LCR++Q
Sbjct: 312 YRACFSFHSSYSEIKDFLSYLCPVNAYPNVIPVGTTMDKVVEILKPLCRSSQ 363
>UNIPROTKB|E1BN11 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006289 "nucleotide-excision repair" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0005730 GO:GO:0016787 GO:GO:0006289 CTD:9937 KO:K15340
InterPro:IPR011084 Pfam:PF07522 OMA:ECPDGLL
GeneTree:ENSGT00530000063183 EMBL:DAAA02059252 EMBL:DAAA02059253
IPI:IPI00712829 RefSeq:XP_002698556.1 RefSeq:XP_580486.2
UniGene:Bt.37962 Ensembl:ENSBTAT00000026896 GeneID:504377
KEGG:bta:504377 NextBio:20866632 Uniprot:E1BN11
Length = 1051
Score = 173 (66.0 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 48/124 (38%), Positives = 64/124 (51%)
Query: 11 WTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXX 70
W EG YFLTH HSDH GLS + P++CS++T L K + I L
Sbjct: 732 WVEGCTAYFLTHFHSDHYAGLSKNFTF-PIYCSKITGNLLKSKLH-VQEQYIHPLP---- 785
Query: 71 XXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNER 129
G ++VI +DANHCPG +VM+LF G +L+TGDFR + S ER
Sbjct: 786 --TDTECIVNG----IKVILLDANHCPG----AVMILFCLPNGHVILHTGDFRADPSMER 835
Query: 130 AEIG 133
+ +G
Sbjct: 836 SLLG 839
Score = 149 (57.5 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTLVKALKDD 144
++VI +DANHCPG +VM+LF G +L+TGDFR + S ER+ +G +
Sbjct: 795 IKVILLDANHCPG----AVMILFCLPNGHVILHTGDFRADPSMERSLLGCHK-------- 842
Query: 145 VVDILYLDNTYCNSSYAFPSREVAAQ 170
V LYLD TYC+ Y+FPS++ Q
Sbjct: 843 -VHTLYLDTTYCSPEYSFPSQQEVIQ 867
Score = 82 (33.9 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 255 WRATGGTQTEKLKEALGSVDRF--HKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSS 312
+R TG T + KL + + + IY +PYS+HS + E++ F+ ++P I V+
Sbjct: 970 FRPTGWTHSNKLTSLADIIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNV 1029
Query: 313 SS 314
S
Sbjct: 1030 GS 1031
>MGI|MGI:1930042 [details] [associations]
symbol:Dclre1a "DNA cross-link repair 1A, PSO2 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR001279 SMART:SM00849 MGI:MGI:1930042
EMBL:AF241240 GO:GO:0005634 GO:GO:0051301 GO:GO:0007067
GO:GO:0016787 GO:GO:0006289 eggNOG:COG1236 HOGENOM:HOG000168450
HOVERGEN:HBG081418 OrthoDB:EOG4F4SB1 InterPro:IPR011084
Pfam:PF07522 EMBL:BC072667 EMBL:AK220214 IPI:IPI00120389
UniGene:Mm.2805 ProteinModelPortal:Q9JIC3 SMR:Q9JIC3 STRING:Q9JIC3
PhosphoSite:Q9JIC3 PRIDE:Q9JIC3 UCSC:uc008hza.1 InParanoid:Q9JIC3
NextBio:311638 Genevestigator:Q9JIC3 GermOnline:ENSMUSG00000025077
Uniprot:Q9JIC3
Length = 1026
Score = 174 (66.3 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 48/124 (38%), Positives = 65/124 (52%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXX 72
EG YFLTH HSDH GLS + R P++CS +T L K + IR L +
Sbjct: 709 EGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEITGNLLKKKLR-VQEQYIRQLPMDTECV 766
Query: 73 XXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
V+V+ +DANHCPG + M+LF+ G +L+TGDFR + S ER+
Sbjct: 767 VDS----------VKVVLLDANHCPG----ATMILFQLPNGAVILHTGDFRADPSMERSR 812
Query: 132 I-GR 134
+ GR
Sbjct: 813 LAGR 816
Score = 145 (56.1 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAEI-GRNTLVKALKD 143
V+V+ +DANHCPG + M+LF+ G +L+TGDFR + S ER+ + GR
Sbjct: 770 VKVVLLDANHCPG----ATMILFQLPNGAVILHTGDFRADPSMERSRLAGRK-------- 817
Query: 144 DVVDILYLDNTYCNSSYAFPSREVAAQ 170
V L+LD TYC+ Y FPS++ Q
Sbjct: 818 --VHTLFLDTTYCSPEYTFPSQQEVIQ 842
Score = 79 (32.9 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 255 WRATGGTQTEKLKEALGSVD--RFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSS 312
+R TG T + + + R + IY +PYS+HS + E++ F+ ++P I V+
Sbjct: 945 FRPTGWTHSNNITSTADIIPQTRGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNV 1004
Query: 313 SS 314
S
Sbjct: 1005 GS 1006
>ASPGD|ASPL0000068746 [details] [associations]
symbol:AN10962 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
EMBL:BN001304 InterPro:IPR011084 Pfam:PF07522
EnsemblFungi:CADANIAT00000700 HOGENOM:HOG000166938 OMA:FCCALRI
Uniprot:C8VBT0
Length = 832
Score = 186 (70.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 72/213 (33%), Positives = 99/213 (46%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
ISVD + G+ YFL+H HSDH GLS +W GP++CSR TA L + +D
Sbjct: 404 ISVDAFRYGAVESCNAYFLSHFHSDHYIGLSKSWRHGPIYCSRATANLVRQQLK-VDPKW 462
Query: 62 IRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRG--DFGC----- 114
+ LD G V+V I+ANHCPG S + LF G
Sbjct: 463 VVDLDF---EKKTEVPGTGG----VQVTMIEANHCPG----SAIFLFEKAVSSGASTRIQ 511
Query: 115 -LLYTGDFRWEASNERAEIGRNTLV--KALK--DDVVDILYLDNTYCNSSYAFPSR-EV- 167
+L+ GDFR + + + R +V K K +D YLD TY + YAFP + +V
Sbjct: 512 RVLHCGDFRASPQHVQHALLRPDVVDPKTGKRWQQRIDACYLDTTYLSPKYAFPRQSDVI 571
Query: 168 -AAQQIWVWPERLQTMHLLGFHDIFTTKTSLTR 199
A ++ V ++ Q LG H F T T T+
Sbjct: 572 NACAELCVRIDQGQ-YDSLG-HMPFQTATPTTK 602
Score = 57 (25.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 25/98 (25%), Positives = 36/98 (36%)
Query: 206 YSFSIDTL-ESLNTMHP----TIGIMPSGLPWVVXXXXXXXXXXX-XXXXXYQSKWRATG 259
+ +TL + L++M P IG P+G W Y S W+
Sbjct: 693 FEIRAETLCDYLDSMKPHFTRVIGFRPTG--WTYRPPAGRTLENPPVSTVLYSSHWKTPF 750
Query: 260 GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEF 297
+ L GS + VPYS+HS F E+ F
Sbjct: 751 SVRD--LTPQRGSTRE--SACFGVPYSEHSSFRELTMF 784
>UNIPROTKB|F1RW83 [details] [associations]
symbol:DCLRE1C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030183 "B cell differentiation" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IEA] GO:GO:0010212
GO:GO:0006310 GO:GO:0030183 GO:GO:0006302 GO:GO:0000723
GO:GO:0000014 GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 OMA:MFRNMPD EMBL:CU929591
EMBL:FP312867 Ensembl:ENSSSCT00000012093 Uniprot:F1RW83
Length = 695
Score = 175 (66.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 57/176 (32%), Positives = 85/176 (48%)
Query: 6 ISVDRWTEGS---QVYFLTHLH-SDHTQGLSSAWARG--------PLFCSRLTAKLFPLK 53
IS+DR+ + + YFL+H H +DH +GL ++ + L+CS +T +L L
Sbjct: 14 ISIDRFDRENLRARAYFLSHCHKADHMKGLRASTLKRRLECSLKVSLYCSPVTRELL-LT 72
Query: 54 FPGLDLSLIRV--LDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGD 111
P R+ +++ GEK + V + A HCPG SVM FR
Sbjct: 73 NPRYRFWEKRIVSIEVETPTQISLIDEASGEKEEIVVTLLPAGHCPG----SVMSYFRXT 128
Query: 112 FGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSY-AFPSRE 166
G +LYTGDF W+ E A + ++KD + +YLD T+C+ Y PSRE
Sbjct: 129 HGTVLYTGDF-WQ-KGEAARMELLHSGGSVKD--IQSVYLDTTFCHPKYYQIPSRE 180
Score = 65 (27.9 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGR-LCRANQ--PPLRYK 337
Y +S HS ++EI++FL+ + P N+ V ++ + + LCR++Q P +YK
Sbjct: 312 YRACFSFHSSYSEIKDFLSYISPVNVYPNVIPLGTTLEKVKEILKPLCRSSQNIEP-KYK 370
Query: 338 QEKRVQHKTVV 348
+++ ++
Sbjct: 371 PLGKLKRARII 381
>SGD|S000004745 [details] [associations]
symbol:PSO2 "Nuclease required for DNA single- and
double-strand break repair" species:4932 "Saccharomyces cerevisiae"
[GO:0006302 "double-strand break repair" evidence=TAS] [GO:0090305
"nucleic acid phosphodiester bond hydrolysis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IC;IDA] [GO:0003684 "damaged DNA
binding" evidence=IMP] [GO:0008409 "5'-3' exonuclease activity"
evidence=IMP;IDA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0036297 "interstrand cross-link repair" evidence=IGI;IMP]
SGD:S000004745 GO:GO:0005634 GO:GO:0046872 GO:GO:0003684
EMBL:BK006946 GO:GO:0006302 eggNOG:COG1236 GO:GO:0036297
EMBL:Z47071 GO:GO:0008409 KO:K15340 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 OMA:SEHSSFK OrthoDB:EOG4M68SB
EMBL:X64004 EMBL:X76917 PIR:S19646 RefSeq:NP_013857.1
ProteinModelPortal:P30620 DIP:DIP-6301N IntAct:P30620
MINT:MINT-699963 STRING:P30620 PaxDb:P30620 EnsemblFungi:YMR137C
GeneID:855168 KEGG:sce:YMR137C CYGD:YMR137c HOGENOM:HOG000115743
NextBio:978602 Genevestigator:P30620 GermOnline:YMR137C
Uniprot:P30620
Length = 661
Score = 174 (66.3 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 50/166 (30%), Positives = 77/166 (46%)
Query: 18 YFLTHLHSDHTQGLSSAWAR---GP----LFCSRLTAKLFPLKFPGLDLSLIRVLDIGXX 70
YFL+H HSDH GL +W P L+CS++TA L LKF + + I++L +
Sbjct: 244 YFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSKITAILVNLKFK-IPMDEIQILPMNKR 302
Query: 71 XXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC----LLYTGDFRWEAS 126
+ V+ +DANHCPG + + +L+TGDFR A
Sbjct: 303 FWITDT---------ISVVTLDANHCPGAIIMLFQEFLANSYDKPIRQILHTGDFRSNA- 352
Query: 127 NERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+ E + L + ++ +D +YLD TY Y FPS+ + +
Sbjct: 353 -KMIETIQKWLAETA-NETIDQVYLDTTYMTMGYNFPSQHSVCETV 396
Score = 64 (27.6 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 265 KLKEALGSVDRFHKY-IYSVPYSDHSCFTEIEEF 297
++ L +++K+ +++VPYS+HS F ++ +F
Sbjct: 587 EISSILRQYKKYNKFQVFNVPYSEHSSFNDLVKF 620
>UNIPROTKB|E2QZ29 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0005730 GO:GO:0016787 GO:GO:0006289 CTD:9937 KO:K15340
InterPro:IPR011084 Pfam:PF07522 OMA:ECPDGLL
GeneTree:ENSGT00530000063183 InterPro:IPR008996 SUPFAM:SSF50353
EMBL:AAEX03015537 RefSeq:XP_535018.3 Ensembl:ENSCAFT00000017779
GeneID:477824 KEGG:cfa:477824 NextBio:20853244 Uniprot:E2QZ29
Length = 1049
Score = 158 (60.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 45/121 (37%), Positives = 61/121 (50%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXX 72
EG YFLTH HSDH GLS + P++CS +T L K + I L +
Sbjct: 732 EGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEITGNLLKSKLH-VQKQYIHPLPMDTECI 789
Query: 73 XXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
V+V+ +DANHCPG +VM+LF G LL+TGDFR + + ER+
Sbjct: 790 VNG----------VKVVLLDANHCPG----AVMILFYLPNGNVLLHTGDFRADPTMERSR 835
Query: 132 I 132
+
Sbjct: 836 L 836
Score = 147 (56.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 37/86 (43%), Positives = 50/86 (58%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTLVKALKDD 144
V+V+ +DANHCPG +VM+LF G LL+TGDFR + + ER+ L
Sbjct: 793 VKVVLLDANHCPG----AVMILFYLPNGNVLLHTGDFRADPTMERSR---------LAGQ 839
Query: 145 VVDILYLDNTYCNSSYAFPSREVAAQ 170
V LYLD TYC+ Y+FPS++ Q
Sbjct: 840 KVHTLYLDTTYCSPEYSFPSQQEVIQ 865
Score = 80 (33.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 255 WRATGGTQTEKLKEALGSVDRF--HKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
+R TG T + +L V + + IY +PYS+HS + E++ F+ ++P I
Sbjct: 968 FRPTGWTHSNQLTNIRDIVPQIKGNISIYGIPYSEHSSYLELKRFVQWLKPQKI 1021
>RGD|1306156 [details] [associations]
symbol:Dclre1a "DNA cross-link repair 1A" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006289 "nucleotide-excision
repair" evidence=IEA;ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001279 SMART:SM00849 RGD:1306156
GO:GO:0005730 GO:GO:0016787 GO:GO:0006289 CTD:9937 KO:K15340
OrthoDB:EOG4F4SB1 InterPro:IPR011084 Pfam:PF07522 OMA:ECPDGLL
GeneTree:ENSGT00530000063183 EMBL:CH473986 IPI:IPI00363761
RefSeq:NP_001099671.1 UniGene:Rn.41244 Ensembl:ENSRNOT00000036321
GeneID:292127 KEGG:rno:292127 UCSC:RGD:1306156 NextBio:633805
Uniprot:D3Z924
Length = 1026
Score = 164 (62.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 45/119 (37%), Positives = 61/119 (51%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXX 72
EG YFLTH HSDH GLS + R P++CS +T L K + I L +
Sbjct: 709 EGCTAYFLTHFHSDHYAGLSKDFTR-PIYCSEITGSLLKKKLR-VQEQYIHQLPMDTECI 766
Query: 73 XXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRWEASNERA 130
V+V+ +DANHCPG + M+LF+ G + L+TGDFR + S ER+
Sbjct: 767 VDG----------VKVVLLDANHCPG----ATMILFQLPNGAVTLHTGDFRADPSMERS 811
Score = 147 (56.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 37/86 (43%), Positives = 53/86 (61%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRWEASNERAEIGRNTLVKALKDD 144
V+V+ +DANHCPG + M+LF+ G + L+TGDFR + S ER+ L+ + K
Sbjct: 770 VKVVLLDANHCPG----ATMILFQLPNGAVTLHTGDFRADPSMERS------LLASRK-- 817
Query: 145 VVDILYLDNTYCNSSYAFPSREVAAQ 170
V L+LD TYC+ Y FPS++ A Q
Sbjct: 818 -VHTLFLDTTYCSPEYTFPSQQEAIQ 842
Score = 72 (30.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 280 IYSVPYSDHSCFTEIEEFLNLVQPSNI 306
IY +PYS+HS + E++ F+ ++P I
Sbjct: 972 IYGIPYSEHSSYLEMKRFVQWLKPQKI 998
>ZFIN|ZDB-GENE-050522-124 [details] [associations]
symbol:dclre1a "DNA cross-link repair 1A (PSO2
homolog, S. cerevisiae)" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001279 SMART:SM00849
ZFIN:ZDB-GENE-050522-124 GO:GO:0016787 InterPro:IPR011084
Pfam:PF07522 GeneTree:ENSGT00530000063183 EMBL:CU695011
IPI:IPI00829229 Ensembl:ENSDART00000075876 ArrayExpress:F1QNK4
Bgee:F1QNK4 Uniprot:F1QNK4
Length = 904
Score = 156 (60.0 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 46/118 (38%), Positives = 60/118 (50%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXX 72
EG YFLTH HSDH GL A P++C+++T+ L K +D I VL +
Sbjct: 585 EGVTAYFLTHFHSDHYGGLKKDSAV-PIYCNKVTSNLVKSKLK-VDEQYIHVLPMNTECI 642
Query: 73 XXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLF-RGDFGCLLYTGDFRWEASNER 129
V+V +DANHCPG + MLLF D +L+TGDFR + S ER
Sbjct: 643 VQG----------VKVTLLDANHCPG----AAMLLFVLPDGQTVLHTGDFRADPSMER 686
Score = 132 (51.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 86 VEVIAIDANHCPGILGCSVMLLF-RGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDD 144
V+V +DANHCPG + MLLF D +L+TGDFR + S ER ++ L+
Sbjct: 646 VKVTLLDANHCPG----AAMLLFVLPDGQTVLHTGDFRADPSMERYPE-----LQGLR-- 694
Query: 145 VVDILYLDNTYCNSSYAFPSRE 166
+ LYLD TYC+ Y FP+++
Sbjct: 695 -IQTLYLDTTYCSPEYTFPTQQ 715
Score = 77 (32.2 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 280 IYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
IY +PYS+HS F E++ F+ ++P I V+ S
Sbjct: 848 IYGIPYSEHSSFLELKRFVQWLRPKKIIPTVNVGS 882
>UNIPROTKB|Q6PJP8 [details] [associations]
symbol:DCLRE1A "DNA cross-link repair 1A protein"
species:9606 "Homo sapiens" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001279 SMART:SM00849
EMBL:D42045 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067 EMBL:CH471066
GO:GO:0016787 GO:GO:0006289 EMBL:AL592546 eggNOG:COG1236 CTD:9937
HOGENOM:HOG000168450 HOVERGEN:HBG081418 KO:K15340 OrthoDB:EOG4F4SB1
InterPro:IPR011084 Pfam:PF07522 EMBL:AY607842 EMBL:BC013124
EMBL:BC062582 IPI:IPI00478916 RefSeq:NP_001258745.1
RefSeq:NP_055696.3 UniGene:Hs.1560 PDB:4B87 PDBsum:4B87
ProteinModelPortal:Q6PJP8 SMR:Q6PJP8 STRING:Q6PJP8
PhosphoSite:Q6PJP8 DMDM:311033461 PaxDb:Q6PJP8 PRIDE:Q6PJP8
Ensembl:ENST00000361384 Ensembl:ENST00000369305 GeneID:9937
KEGG:hsa:9937 UCSC:uc001law.2 GeneCards:GC10M115584 HGNC:HGNC:17660
HPA:HPA036907 MIM:609682 neXtProt:NX_Q6PJP8 PharmGKB:PA27174
InParanoid:Q6PJP8 OMA:ECPDGLL GenomeRNAi:9937 NextBio:37488
Bgee:Q6PJP8 CleanEx:HS_DCLRE1A Genevestigator:Q6PJP8
GermOnline:ENSG00000198924 Uniprot:Q6PJP8
Length = 1040
Score = 156 (60.0 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 45/119 (37%), Positives = 60/119 (50%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXX 72
EG YFLTH HSDH GLS + P++CS +T L K + I L +
Sbjct: 723 EGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKLH-VQEQYIHPLPLDTECI 780
Query: 73 XXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERA 130
V+V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 781 VNG----------VKVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMERS 825
Score = 153 (58.9 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 37/82 (45%), Positives = 50/82 (60%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAEIGRNTLVKALKDD 144
V+V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+ L D
Sbjct: 784 VKVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMERS---------LLADQ 830
Query: 145 VVDILYLDNTYCNSSYAFPSRE 166
V +LYLD TYC+ Y FPS++
Sbjct: 831 KVHMLYLDTTYCSPEYTFPSQQ 852
Score = 77 (32.2 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 255 WRATGGTQTEKLKEALGSVDRF--HKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
+R TG T + K + + + IY +PYS+HS + E++ F+ ++P I
Sbjct: 959 FRPTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKI 1012
>WB|WBGene00045237 [details] [associations]
symbol:mrt-1 species:6239 "Caenorhabditis elegans"
[GO:0008408 "3'-5' exonuclease activity" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0000003
"reproduction" evidence=IMP] [GO:0007004 "telomere maintenance via
telomerase" evidence=IGI] [GO:0006289 "nucleotide-excision repair"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 GO:GO:0000003 GO:GO:0003697
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0008408 GO:GO:0007004
GO:GO:0006289 eggNOG:COG1236 InterPro:IPR011084 Pfam:PF07522
EMBL:Z81080 RefSeq:NP_740895.1 ProteinModelPortal:Q8T3E0 SMR:Q8T3E0
PaxDb:Q8T3E0 EnsemblMetazoa:F39H2.5.1 EnsemblMetazoa:F39H2.5.2
GeneID:172666 KEGG:cel:CELE_F39H2.5 UCSC:F39H2.5.1 CTD:172666
WormBase:F39H2.5 GeneTree:ENSGT00390000008639 HOGENOM:HOG000018686
InParanoid:Q8T3E0 OMA:HENIVIP NextBio:876487 Uniprot:Q8T3E0
Length = 608
Score = 114 (45.2 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 6 ISVDRWTE--GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFP 51
ISVD + + GS+ FLTH HSDH +GL W R ++CS TAKL P
Sbjct: 223 ISVDYFLKKSGSRYNFLTHAHSDHYRGLDKKWTRS-VYCSPETAKLLP 269
Score = 100 (40.3 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 32/86 (37%), Positives = 44/86 (51%)
Query: 87 EVIAIDANHCPGILGCSVMLLFRGDF------GCLLYTGDFRWEASN-ERAEIGRNTLVK 139
+V ++ANHCPG +VM +F G G +L TGDFR + E + G N L
Sbjct: 300 QVTLVNANHCPG----AVMFVFEGSKIEEIAGGAVLCTGDFRADKMFLESLKPG-NQL-H 353
Query: 140 ALKDDVVDILYLDNTYCNSSYAFPSR 165
+ + I+YLDNTY + FP R
Sbjct: 354 WMTEIKFGIIYLDNTYFSLDMPFPER 379
Score = 56 (24.8 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 280 IYSVPYSDHSCFTEIEEFLN 299
I +PYSDHS +EI +FL+
Sbjct: 487 IIRIPYSDHSSRSEILKFLS 506
>UNIPROTKB|I3LAK7 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
EMBL:CU424456 Ensembl:ENSSSCT00000023797
GeneTree:ENSGT00530000063183 GO:GO:0016787 InterPro:IPR001279
InterPro:IPR011084 Pfam:PF07522 SMART:SM00849 Uniprot:I3LAK7
Length = 956
Score = 156 (60.0 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 45/119 (37%), Positives = 60/119 (50%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXX 72
EG YFLTH HSDH GLS + P++CS +T L K + I L I
Sbjct: 639 EGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEVTGNLLKSKLH-VQEQYIHPLPIDTECV 696
Query: 73 XXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERA 130
V+V+ +DANHCPG +VM+LF G +L+TGDFR + + ER+
Sbjct: 697 VNG----------VKVVLLDANHCPG----AVMVLFHLPNGHVILHTGDFRADPTMERS 741
Score = 146 (56.5 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTLVKALKDD 144
V+V+ +DANHCPG +VM+LF G +L+TGDFR + + ER+ L+ K
Sbjct: 700 VKVVLLDANHCPG----AVMVLFHLPNGHVILHTGDFRADPTMERS------LLAGQK-- 747
Query: 145 VVDILYLDNTYCNSSYAFPSREVAAQ 170
V LYLD TYC+ Y+FPS++ Q
Sbjct: 748 -VHTLYLDTTYCSPEYSFPSQQEVIQ 772
Score = 75 (31.5 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 255 WRATGGTQTEKLKEALGSVDRF--HKYIYSVPYSDHSCFTEIEEFLNLVQP 303
+R TG T + KL + + + IY +PYS+HS + E++ F+ ++P
Sbjct: 875 FRPTGWTHSNKLTSIADVLPQTKGNISIYGIPYSEHSSYPEMKRFVQWLKP 925
>UNIPROTKB|I3LLR2 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 SMART:SM00849 GO:GO:0016787 InterPro:IPR011084
Pfam:PF07522 GeneTree:ENSGT00530000063183 EMBL:CU424456
Ensembl:ENSSSCT00000024095 Uniprot:I3LLR2
Length = 1034
Score = 156 (60.0 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 45/119 (37%), Positives = 60/119 (50%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXX 72
EG YFLTH HSDH GLS + P++CS +T L K + I L I
Sbjct: 717 EGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEVTGNLLKSKLH-VQEQYIHPLPIDTECV 774
Query: 73 XXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERA 130
V+V+ +DANHCPG +VM+LF G +L+TGDFR + + ER+
Sbjct: 775 VNG----------VKVVLLDANHCPG----AVMVLFHLPNGHVILHTGDFRADPTMERS 819
Score = 146 (56.5 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTLVKALKDD 144
V+V+ +DANHCPG +VM+LF G +L+TGDFR + + ER+ L+ K
Sbjct: 778 VKVVLLDANHCPG----AVMVLFHLPNGHVILHTGDFRADPTMERS------LLAGQK-- 825
Query: 145 VVDILYLDNTYCNSSYAFPSREVAAQ 170
V LYLD TYC+ Y+FPS++ Q
Sbjct: 826 -VHTLYLDTTYCSPEYSFPSQQEVIQ 850
Score = 75 (31.5 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 255 WRATGGTQTEKLKEALGSVDRF--HKYIYSVPYSDHSCFTEIEEFLNLVQP 303
+R TG T + KL + + + IY +PYS+HS + E++ F+ ++P
Sbjct: 953 FRPTGWTHSNKLTSIADVLPQTKGNISIYGIPYSEHSSYPEMKRFVQWLKP 1003
>UNIPROTKB|F1S5H8 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 SMART:SM00849 GO:GO:0016787 InterPro:IPR011084
Pfam:PF07522 OMA:ECPDGLL GeneTree:ENSGT00530000063183 EMBL:CU424456
Ensembl:ENSSSCT00000011643 Uniprot:F1S5H8
Length = 1045
Score = 156 (60.0 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 45/119 (37%), Positives = 60/119 (50%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXX 72
EG YFLTH HSDH GLS + P++CS +T L K + I L I
Sbjct: 728 EGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEVTGNLLKSKLH-VQEQYIHPLPIDTECV 785
Query: 73 XXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERA 130
V+V+ +DANHCPG +VM+LF G +L+TGDFR + + ER+
Sbjct: 786 VNG----------VKVVLLDANHCPG----AVMVLFHLPNGHVILHTGDFRADPTMERS 830
Score = 146 (56.5 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTLVKALKDD 144
V+V+ +DANHCPG +VM+LF G +L+TGDFR + + ER+ L+ K
Sbjct: 789 VKVVLLDANHCPG----AVMVLFHLPNGHVILHTGDFRADPTMERS------LLAGQK-- 836
Query: 145 VVDILYLDNTYCNSSYAFPSREVAAQ 170
V LYLD TYC+ Y+FPS++ Q
Sbjct: 837 -VHTLYLDTTYCSPEYSFPSQQEVIQ 861
Score = 75 (31.5 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 255 WRATGGTQTEKLKEALGSVDRF--HKYIYSVPYSDHSCFTEIEEFLNLVQP 303
+R TG T + KL + + + IY +PYS+HS + E++ F+ ++P
Sbjct: 964 FRPTGWTHSNKLTSIADVLPQTKGNISIYGIPYSEHSSYPEMKRFVQWLKP 1014
>ZFIN|ZDB-GENE-041210-72 [details] [associations]
symbol:dclre1c "DNA cross-link repair 1C, PSO2
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001279 SMART:SM00849 ZFIN:ZDB-GENE-041210-72
GO:GO:0005634 GO:GO:0006281 GO:GO:0006310 GO:GO:0004527
GO:GO:0090305 GO:GO:0004519 eggNOG:COG1236 InterPro:IPR011084
Pfam:PF07522 GeneTree:ENSGT00530000063183 CTD:64421
HOGENOM:HOG000231568 HOVERGEN:HBG081421 KO:K10887 OrthoDB:EOG4894M0
EMBL:BX901962 EMBL:BC115304 IPI:IPI00507176 RefSeq:NP_001038566.1
UniGene:Dr.133955 ProteinModelPortal:Q5RGE5 STRING:Q5RGE5
Ensembl:ENSDART00000067188 GeneID:566285 KEGG:dre:566285
InParanoid:Q5RGE5 OMA:MFRNMPD NextBio:20888116 Bgee:Q5RGE5
Uniprot:Q5RGE5
Length = 639
Score = 166 (63.5 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 57/175 (32%), Positives = 79/175 (45%)
Query: 6 ISVDRWTEGS---QVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLFPLKF 54
IS+DR+ + + YFL+H H DH +GL + L +CS +T +L L
Sbjct: 14 ISLDRFDRENLHARAYFLSHCHKDHMKGLKGPLLKRKLKFSLTVKLYCSYVTKELL-LSN 72
Query: 55 PGLDL--SLIRVLDIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
P I L++ GE V V + A HCPG SVM LF G
Sbjct: 73 PRYAFWEDHIVPLELDSPTSISLIDESTGETEDVVVTLLSAGHCPG----SVMFLFEGAK 128
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSY-AFPSRE 166
G +LYTGDFR A + A + +KD + +Y+D T+ + Y PSRE
Sbjct: 129 GTVLYTGDFRL-AVGDAARMEYLHSGDRVKD--IQSVYIDTTFFDPKYYQIPSRE 180
Score = 57 (25.1 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIR-GIVSSSSCYVDPLYYFGRLCR 328
Y +S HS + E+++FL+ + P NI ++ D LCR
Sbjct: 312 YRACFSFHSSYLEVKDFLSYICPVNIYPNVIPLGKTVEDLTELLKPLCR 360
Score = 37 (18.1 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 342 VQHKTVVAAQIK 353
+QHKT AA++K
Sbjct: 584 LQHKTEEAAELK 595
>UNIPROTKB|F1NC75 [details] [associations]
symbol:DCLRE1A "DNA cross-link repair 1A protein"
species:9031 "Gallus gallus" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR001279
SMART:SM00849 GO:GO:0005730 GO:GO:0016787 GO:GO:0006289
IPI:IPI00680526 InterPro:IPR011084 Pfam:PF07522 OMA:ECPDGLL
GeneTree:ENSGT00530000063183 EMBL:AADN02030915
Ensembl:ENSGALT00000033097 Uniprot:F1NC75
Length = 972
Score = 153 (58.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 46/125 (36%), Positives = 64/125 (51%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXX 72
EG YFLTH HSDH GL+ + PL+C+++T L K + I VL +
Sbjct: 652 EGCTAYFLTHFHSDHYCGLTKNFVF-PLYCNKITGNLVKSKLRVKE-QYINVLPMDTECI 709
Query: 73 XXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNER-- 129
++V+ +DANHCPG + M+LF G +L+TGDFR + S ER
Sbjct: 710 VNG----------IKVLLLDANHCPG----ATMILFYLPSGTAILHTGDFRADPSMERYP 755
Query: 130 AEIGR 134
A IG+
Sbjct: 756 ALIGQ 760
Score = 143 (55.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTLVKALKDD 144
++V+ +DANHCPG + M+LF G +L+TGDFR + S ER AL
Sbjct: 713 IKVLLLDANHCPG----ATMILFYLPSGTAILHTGDFRADPSMER--------YPALIGQ 760
Query: 145 VVDILYLDNTYCNSSYAFPSREVAAQ 170
+ LYLD TYC+ Y FPS++ Q
Sbjct: 761 KIHTLYLDTTYCSPEYTFPSQQEVIQ 786
Score = 72 (30.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 280 IYSVPYSDHSCFTEIEEFLNLVQPSNI 306
IY +PYS+HS + E++ F+ ++P I
Sbjct: 916 IYGIPYSEHSSYLEMKRFVQWLKPQKI 942
>UNIPROTKB|Q5QJC4 [details] [associations]
symbol:DCLRE1A "DNA cross-link repair 1A protein"
species:9031 "Gallus gallus" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000715 "nucleotide-excision repair, DNA damage
recognition" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] InterPro:IPR001279
SMART:SM00849 GO:GO:0005654 GO:GO:0016787 Reactome:REACT_115612
eggNOG:COG1236 EMBL:AY376896 IPI:IPI00680526 RefSeq:NP_001008683.1
UniGene:Gga.22844 ProteinModelPortal:Q5QJC4 STRING:Q5QJC4
GeneID:423902 KEGG:gga:423902 CTD:9937 HOGENOM:HOG000168450
HOVERGEN:HBG081418 InParanoid:Q5QJC4 KO:K15340 OrthoDB:EOG4F4SB1
NextBio:20826302 GO:GO:0000715 InterPro:IPR011084 Pfam:PF07522
Uniprot:Q5QJC4
Length = 972
Score = 153 (58.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 46/125 (36%), Positives = 64/125 (51%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXX 72
EG YFLTH HSDH GL+ + PL+C+++T L K + I VL +
Sbjct: 652 EGCTAYFLTHFHSDHYCGLTKNFVF-PLYCNKITGNLVKSKLRVKE-QYINVLPMDTECI 709
Query: 73 XXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNER-- 129
++V+ +DANHCPG + M+LF G +L+TGDFR + S ER
Sbjct: 710 VNG----------IKVLLLDANHCPG----ATMILFYLPSGTAILHTGDFRADPSMERYP 755
Query: 130 AEIGR 134
A IG+
Sbjct: 756 ALIGQ 760
Score = 143 (55.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTLVKALKDD 144
++V+ +DANHCPG + M+LF G +L+TGDFR + S ER AL
Sbjct: 713 IKVLLLDANHCPG----ATMILFYLPSGTAILHTGDFRADPSMER--------YPALIGQ 760
Query: 145 VVDILYLDNTYCNSSYAFPSREVAAQ 170
+ LYLD TYC+ Y FPS++ Q
Sbjct: 761 KIHTLYLDTTYCSPEYTFPSQQEVIQ 786
Score = 72 (30.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 280 IYSVPYSDHSCFTEIEEFLNLVQPSNI 306
IY +PYS+HS + E++ F+ ++P I
Sbjct: 916 IYGIPYSEHSSYLEMKRFVQWLKPQKI 942
>FB|FBgn0037338 [details] [associations]
symbol:Snm1 "Snm1" species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001279 SMART:SM00849
EMBL:AE014297 GO:GO:0016787 eggNOG:COG1236 KO:K15340
InterPro:IPR011084 Pfam:PF07522 GeneTree:ENSGT00530000063183
EMBL:AY058585 RefSeq:NP_649548.1 UniGene:Dm.13655 SMR:Q9VND2
MINT:MINT-1328399 STRING:Q9VND2 EnsemblMetazoa:FBtr0078688
GeneID:40669 KEGG:dme:Dmel_CG10018 UCSC:CG10018-RA CTD:40669
FlyBase:FBgn0037338 InParanoid:Q9VND2 OMA:QPSISTF OrthoDB:EOG47H451
GenomeRNAi:40669 NextBio:819942 Uniprot:Q9VND2
Length = 763
Score = 154 (59.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 45/121 (37%), Positives = 61/121 (50%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXX 72
EG YFLTH H+DH GL+ + PL+ S ++A+L F LD + I +D+
Sbjct: 286 EGVTHYFLTHFHADHYIGLTKKFCH-PLYVSPISARLVRT-FIKLDETHIHEIDVDQTLD 343
Query: 73 XXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
V+V A++ANHCPG L M F+ G C+L+TGDFR A E
Sbjct: 344 VDG----------VQVTALEANHCPGAL----MFFFKLSSGECILHTGDFRASADMESLP 389
Query: 132 I 132
I
Sbjct: 390 I 390
Score = 135 (52.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 34/78 (43%), Positives = 43/78 (55%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTLVKALKDD 144
V+V A++ANHCPG L M F+ G C+L+TGDFR A E I N
Sbjct: 347 VQVTALEANHCPGAL----MFFFKLSSGECILHTGDFRASADMESLPIFWN-------HS 395
Query: 145 VVDILYLDNTYCNSSYAF 162
+D+LYLD TY N +Y F
Sbjct: 396 NIDLLYLDTTYMNKNYDF 413
Score = 61 (26.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 283 VPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLCRANQPPLR-YKQEKR 341
+ YS+HS + E+E F+ ++P + +S+ D LY G + P+R YK E R
Sbjct: 548 IEYSEHSSYKELERFVRFLKPKRV---ISTVPVGRD-LYVTGEV------PIRWYKYEGR 597
>POMBASE|SPAC22A12.01c [details] [associations]
symbol:pso2 "DNA 5' exonuclease (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003684 "damaged DNA
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0008409 "5'-3'
exonuclease activity" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001279 SMART:SM00849
PomBase:SPAC22A12.01c GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006281
eggNOG:COG1236 GO:GO:0008409 KO:K15340 InterPro:IPR011084
Pfam:PF07522 PIR:T38927 RefSeq:NP_593231.2
ProteinModelPortal:Q10264 STRING:Q10264
EnsemblFungi:SPAC22A12.01c.1 GeneID:2541503 KEGG:spo:SPAC22A12.01c
OMA:SEHSSFK OrthoDB:EOG4M68SB NextBio:20802602 Uniprot:Q10264
Length = 560
Score = 144 (55.7 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 40/143 (27%), Positives = 61/143 (42%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXX 72
+G + YFL+H HSDH GL+ W GP++CS +T L + +D ++ L +
Sbjct: 206 DGVEAYFLSHFHSDHYGGLTPKWKHGPIYCSEVTGNLL-INVMHVDEQYVKRLKLNQPYN 264
Query: 73 XXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
+ V +DANHCPG L +L+ GDFR + +
Sbjct: 265 IMG----------ITVYVLDANHCPGSAMFVFETLQSNQTRRVLHCGDFRASKDHVMHPV 314
Query: 133 GRNTLVKALKDDVVDILYLDNTY 155
R K + +D YL+ Y
Sbjct: 315 LRE---KTIHKVYLDTTYLNPKY 334
Score = 53 (23.7 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEF 297
L+ GS D+ ++ PYS+HS F ++ F
Sbjct: 483 LRAIRGSTDKVAAFV--APYSEHSSFYDLTMF 512
>GENEDB_PFALCIPARUM|PF14_0711 [details] [associations]
symbol:PF14_0711 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001279 SMART:SM00849 GO:GO:0016787 EMBL:AE014187
InterPro:IPR011084 Pfam:PF07522 RefSeq:XP_001348885.1
ProteinModelPortal:Q8IK95 EnsemblProtists:PF14_0711:mRNA
GeneID:812293 KEGG:pfa:PF14_0711 EuPathDB:PlasmoDB:PF3D7_1474300
HOGENOM:HOG000282173 ProtClustDB:CLSZ2431799 Uniprot:Q8IK95
Length = 860
Score = 116 (45.9 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 16 QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXXXXX 75
+++FLTH H+DH ++ + +FCS++T KL L+ ++++
Sbjct: 42 RIFFLTHFHADHYTNINKYFNEN-VFCSQITKKL-----------LVNIIEVQDKYVHNL 89
Query: 76 XXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRW 123
+V IDANHCPG SV++ F G +++TGDFR+
Sbjct: 90 KINKIYYLFNFKVAFIDANHCPG----SVIIYFEFKNGTKIIHTGDFRY 134
Score = 69 (29.3 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 280 IYSVPYSDHSCFTEIEEFLNLVQPSNI 306
I+ +PYS+HS E++ F+ ++P NI
Sbjct: 745 IFLIPYSEHSNLDELKNFVKSIKPCNI 771
Score = 40 (19.1 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 146 VDI-LYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHL 184
+D+ LY + + S+ F + + + I + PE +Q +H+
Sbjct: 324 IDLCLYFNQNEEDISFFFDYKNLNEKGIILNPENIQKIHV 363
Score = 37 (18.1 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 6/25 (24%), Positives = 14/25 (56%)
Query: 150 YLDNTYCNSSYAFPSREVAAQQIWV 174
Y+ Y +++YA + A Q+++
Sbjct: 471 YIKTIYLDTTYALSKNNLFAPQMYL 495
>UNIPROTKB|Q8IK95 [details] [associations]
symbol:PF14_0711 "DNA repair metallo-beta-lactamase
protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 SMART:SM00849 GO:GO:0016787
EMBL:AE014187 InterPro:IPR011084 Pfam:PF07522 RefSeq:XP_001348885.1
ProteinModelPortal:Q8IK95 EnsemblProtists:PF14_0711:mRNA
GeneID:812293 KEGG:pfa:PF14_0711 EuPathDB:PlasmoDB:PF3D7_1474300
HOGENOM:HOG000282173 ProtClustDB:CLSZ2431799 Uniprot:Q8IK95
Length = 860
Score = 116 (45.9 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 16 QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGXXXXXXX 75
+++FLTH H+DH ++ + +FCS++T KL L+ ++++
Sbjct: 42 RIFFLTHFHADHYTNINKYFNEN-VFCSQITKKL-----------LVNIIEVQDKYVHNL 89
Query: 76 XXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRW 123
+V IDANHCPG SV++ F G +++TGDFR+
Sbjct: 90 KINKIYYLFNFKVAFIDANHCPG----SVIIYFEFKNGTKIIHTGDFRY 134
Score = 69 (29.3 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 280 IYSVPYSDHSCFTEIEEFLNLVQPSNI 306
I+ +PYS+HS E++ F+ ++P NI
Sbjct: 745 IFLIPYSEHSNLDELKNFVKSIKPCNI 771
Score = 40 (19.1 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 146 VDI-LYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHL 184
+D+ LY + + S+ F + + + I + PE +Q +H+
Sbjct: 324 IDLCLYFNQNEEDISFFFDYKNLNEKGIILNPENIQKIHV 363
Score = 37 (18.1 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 6/25 (24%), Positives = 14/25 (56%)
Query: 150 YLDNTYCNSSYAFPSREVAAQQIWV 174
Y+ Y +++YA + A Q+++
Sbjct: 471 YIKTIYLDTTYALSKNNLFAPQMYL 495
>CGD|CAL0004348 [details] [associations]
symbol:PSO2 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 SMART:SM00849 CGD:CAL0004348
GO:GO:0016787 EMBL:AACQ01000059 EMBL:AACQ01000058 eggNOG:COG1236
RefSeq:XP_717085.1 RefSeq:XP_717164.1 ProteinModelPortal:Q5A5N8
GeneID:3641241 GeneID:3641328 KEGG:cal:CaO19.12822
KEGG:cal:CaO19.5362 Uniprot:Q5A5N8
Length = 537
Score = 127 (49.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 46/153 (30%), Positives = 67/153 (43%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
+ VD+++ ++VY LTH H DH QGL ++ G ++CS LT L +S R
Sbjct: 17 VVVDKFSGTAEVYLLTHCHQDHLQGLLNSSFCGRVYCSALTKSTLELDTRYTRVS--RFF 74
Query: 66 DIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125
G+ V + I + HCPG S M L +L TGD R E+
Sbjct: 75 KAKEYNETFTVDILLGK---VSITMIPSYHCPG----SAMFLLESFCKNVLITGDVRAES 127
Query: 126 SNERAEIGRNTL---VKALKDDVVDILYLDNTY 155
+ I L + LK +D +YLD T+
Sbjct: 128 WWTLSLIKNPHLFPYITGLK--TLDQIYLDTTF 158
Score = 46 (21.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 273 VDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
+DRF KY Y +P + I ++ +L QP + +V
Sbjct: 377 IDRFQKYGYPLPEVINREVAFISKW-SLSQPETSKSVV 413
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/49 (20%), Positives = 21/49 (42%)
Query: 285 YSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYY---FGRLCRAN 330
+S HS + E + L P ++ S +++ FG +C ++
Sbjct: 323 FSRHSSYQESRNLVALFSPKSVYPCTESKVSWLNGFTVARVFGDVCTSD 371
>UNIPROTKB|Q5A5N8 [details] [associations]
symbol:PSO2 "Putative uncharacterized protein PSO2"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 SMART:SM00849 CGD:CAL0004348
GO:GO:0016787 EMBL:AACQ01000059 EMBL:AACQ01000058 eggNOG:COG1236
RefSeq:XP_717085.1 RefSeq:XP_717164.1 ProteinModelPortal:Q5A5N8
GeneID:3641241 GeneID:3641328 KEGG:cal:CaO19.12822
KEGG:cal:CaO19.5362 Uniprot:Q5A5N8
Length = 537
Score = 127 (49.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 46/153 (30%), Positives = 67/153 (43%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
+ VD+++ ++VY LTH H DH QGL ++ G ++CS LT L +S R
Sbjct: 17 VVVDKFSGTAEVYLLTHCHQDHLQGLLNSSFCGRVYCSALTKSTLELDTRYTRVS--RFF 74
Query: 66 DIGXXXXXXXXXXXXGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125
G+ V + I + HCPG S M L +L TGD R E+
Sbjct: 75 KAKEYNETFTVDILLGK---VSITMIPSYHCPG----SAMFLLESFCKNVLITGDVRAES 127
Query: 126 SNERAEIGRNTL---VKALKDDVVDILYLDNTY 155
+ I L + LK +D +YLD T+
Sbjct: 128 WWTLSLIKNPHLFPYITGLK--TLDQIYLDTTF 158
Score = 46 (21.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 273 VDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
+DRF KY Y +P + I ++ +L QP + +V
Sbjct: 377 IDRFQKYGYPLPEVINREVAFISKW-SLSQPETSKSVV 413
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/49 (20%), Positives = 21/49 (42%)
Query: 285 YSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYY---FGRLCRAN 330
+S HS + E + L P ++ S +++ FG +C ++
Sbjct: 323 FSRHSSYQESRNLVALFSPKSVYPCTESKVSWLNGFTVARVFGDVCTSD 371
>CGD|CAL0005993 [details] [associations]
symbol:orf19.2926 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR001279
SMART:SM00849 CGD:CAL0005993 EMBL:AACQ01000017 EMBL:AACQ01000015
GO:GO:0016787 eggNOG:COG1236 InterPro:IPR011084 Pfam:PF07522
RefSeq:XP_721154.1 RefSeq:XP_721426.1 ProteinModelPortal:Q5AIC7
GeneID:3636791 GeneID:3637070 KEGG:cal:CaO19.10443
KEGG:cal:CaO19.2926 Uniprot:Q5AIC7
Length = 830
Score = 76 (31.8 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLF 41
YFLTH H+DH G+S WA +F
Sbjct: 272 YFLTHFHADHYGGISKKWAYERVF 295
Score = 74 (31.1 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 24/87 (27%), Positives = 39/87 (44%)
Query: 88 VIAIDANHCPGI-LGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDV- 145
V I ANHCPG + + +L+ GDFR I R + K+++
Sbjct: 383 VTPITANHCPGAAIFFFESIGIDNKIYRILHCGDFRVNMEILNHPILRPFSLTHSKNNLL 442
Query: 146 --VDILYLDNTYCNSSYAFPSREVAAQ 170
+D +YLD TY + + P +E+ +
Sbjct: 443 QSIDKVYLDTTYMSPKHNLPKQELVCE 469
Score = 67 (28.6 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 253 SKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQ 302
+K + T+T+ + D + +YSVPYS+HS F E+ F+ Q
Sbjct: 716 TKRKTKTNTKTKTKTKTKTDPDLYR--LYSVPYSEHSSFRELAYFIIFFQ 763
Score = 40 (19.1 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 7/28 (25%), Positives = 18/28 (64%)
Query: 40 LFCSRLTAKLFPLKFPGLDLSLIRVLDI 67
++C+ +T +L L++ +D I+ L++
Sbjct: 319 IYCTGITGRLLTLRY-SIDPRFIKHLEL 345
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 403 362 0.00082 117 3 11 22 0.36 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 624 (66 KB)
Total size of DFA: 257 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.01u 0.10s 25.11t Elapsed: 00:00:01
Total cpu time: 25.02u 0.10s 25.12t Elapsed: 00:00:01
Start: Sat May 11 08:35:08 2013 End: Sat May 11 08:35:09 2013