BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040718
(403 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255563435|ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
gi|223538070|gb|EEF39682.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
Length = 427
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 269/435 (61%), Positives = 315/435 (72%), Gaps = 54/435 (12%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
MEKGL+SVD+W EGSQVYFLTHLHSDHT+GL+SAWARGPLFCSRLTA LFP +FP +LS
Sbjct: 1 MEKGLVSVDQWKEGSQVYFLTHLHSDHTKGLTSAWARGPLFCSRLTANLFPARFPEFNLS 60
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
L+ VLDIG WHS+SVVSPSSG +T ++V+ IDA+HCPG +VMLLFRGDFGCLLYTGD
Sbjct: 61 LLCVLDIGVWHSLSVVSPSSGSQTVLQVMPIDAHHCPG----AVMLLFRGDFGCLLYTGD 116
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ--------- 171
FRWEA++ER +IG N L+ ALKDD VDILYLDNTYCN S+ FP R VAA+Q
Sbjct: 117 FRWEATSERGKIGSNMLLNALKDDSVDILYLDNTYCNPSFDFPPRHVAARQVVDIIASHP 176
Query: 172 ---------------------------IWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVP 204
IWVWPERLQTMHLLGFHDIFTTKTS TRVRAVP
Sbjct: 177 GHDIIIGIDSLGKEDLLLHISRMLNIKIWVWPERLQTMHLLGFHDIFTTKTSQTRVRAVP 236
Query: 205 RYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSS--YQSKWRATGGTQ 262
RYSFSI+TLE LN MHPTIGIMPSGLPWVVKP KG +L GS +S K A GGT
Sbjct: 237 RYSFSINTLEELNKMHPTIGIMPSGLPWVVKPTKGDDNLFGSFLTSRYKNGKLSANGGTG 296
Query: 263 TEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYY 322
T+KL ++ SV+R H+YIYSVPYSDHSCF+EI+EF+ LVQP++++GIVSSSSCY++P+YY
Sbjct: 297 TDKLNGSVQSVERLHQYIYSVPYSDHSCFSEIQEFIELVQPTSMKGIVSSSSCYINPVYY 356
Query: 323 FGRLCRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKVD-RKRRRTAEVGVLGVHM 381
FGRLCR N R + + + K VV Q K G+ + K+RRT V
Sbjct: 357 FGRLCRENWSAQRMRD--KYEKKEVVDVQTK--SYCGKYIPMGAAKKRRTGRV------- 405
Query: 382 SKVDALRRARRGAKL 396
S+V ALRR R GAK+
Sbjct: 406 SRVRALRRIRHGAKI 420
>gi|449453656|ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
gi|449493187|ref|XP_004159216.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
Length = 428
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 258/438 (58%), Positives = 309/438 (70%), Gaps = 51/438 (11%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
ME GLISVDRW+EGSQ+YFLTHLHSDHT+GLSS W++GPLFCSRLTAK FPLKFP +LS
Sbjct: 1 MENGLISVDRWSEGSQIYFLTHLHSDHTKGLSSQWSKGPLFCSRLTAKFFPLKFPSFNLS 60
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
L+RVL+IG WHSIS+VSPSSG + ++V+AIDA+HCPG +VMLLFRGDFGCLLYTGD
Sbjct: 61 LLRVLEIGLWHSISLVSPSSGSRKVIKVVAIDAHHCPG----AVMLLFRGDFGCLLYTGD 116
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI-------- 172
FRWE S+ERA GR L+ AL+D+ VD+LYLDNTYCN SYAFPSRE+AA+QI
Sbjct: 117 FRWEMSSERANKGRIALLNALEDNTVDVLYLDNTYCNPSYAFPSREIAARQIVDIIASHP 176
Query: 173 ----------------------------WVWPERLQTMHLLGFHDIFTTKTSLTRVRAVP 204
WVWPERLQTMHLLGF++ FTTKT+LTRVRAVP
Sbjct: 177 QHDIIIGVNSLGKEDLLVHISRMLGLKVWVWPERLQTMHLLGFNNEFTTKTNLTRVRAVP 236
Query: 205 RYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSS--YQSKWRATGGTQ 262
RYSFSIDTLE LN M PTIGIMPSGLPWVV+P +G G GSL + QSK G
Sbjct: 237 RYSFSIDTLEGLNQMRPTIGIMPSGLPWVVRPHEGDGIPSGSLLITRYRQSKLNENGPFL 296
Query: 263 TEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYY 322
EK + SV + HKYI+SVPYSDH+CF+EI+EF+ L+ P+ I+GIVSSSSCY++PLYY
Sbjct: 297 IEKQTGKVESVTKLHKYIFSVPYSDHACFSEIQEFIKLICPTTIKGIVSSSSCYIEPLYY 356
Query: 323 FGRLCRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRRRTAEVGVLGVHMS 382
FGRLC A QP ++ +K K IKF V+ K+ A + GV +
Sbjct: 357 FGRLCGAKQPVNKFHHKKERTEKVEKDVDIKF---------VNWKKGTNAGILNAGVRLG 407
Query: 383 KVDALRRARRGAKLARSE 400
+V ALRR +RGA+L +
Sbjct: 408 RVSALRRVQRGARLQEDD 425
>gi|225447705|ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
gi|296081253|emb|CBI17997.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/442 (59%), Positives = 318/442 (71%), Gaps = 49/442 (11%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
MEKGLISVDRW++ SQVYFLTHLHSDHTQ LSS+W +GPLFCSRLTAKLFP KFP +LS
Sbjct: 1 MEKGLISVDRWSDHSQVYFLTHLHSDHTQCLSSSWTKGPLFCSRLTAKLFPFKFPNFNLS 60
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
L+R+L+IGSWHS+S+VSPSSG +T V+V+AIDA+HCPG +VM LFRGDFGC+L+TGD
Sbjct: 61 LLRILEIGSWHSVSLVSPSSGSETTVDVMAIDAHHCPG----AVMYLFRGDFGCMLFTGD 116
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ--------- 171
FRWEA+NERA+IGR L+ AL+ D V+ILYLDNTYCN S++FPSRE AAQQ
Sbjct: 117 FRWEATNERAKIGRTMLLHALEGDRVNILYLDNTYCNPSFSFPSREAAAQQVVDIIASHP 176
Query: 172 ---------------------------IWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVP 204
IWVWPERLQTMHLLGFHDIFTTKTSLTR+RAVP
Sbjct: 177 KHDIIIGIDTLGKEDLLLYISRSLKVKIWVWPERLQTMHLLGFHDIFTTKTSLTRIRAVP 236
Query: 205 RYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSL--PGSLFSSYQSKWRATGGTQ 262
RYSFSI+TLE LNT+ PTIGIMPSGLPWVVKP +G + P S+ +K GG +
Sbjct: 237 RYSFSINTLEGLNTVRPTIGIMPSGLPWVVKPSEGNDNPAGPPSISHHCGNKRIINGGPR 296
Query: 263 TEKLKEA-LGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLY 321
E K+ L SV RFH+YIYSVPYS+HSCF EIE+F+ LVQP NI+GIVSSS CY++PLY
Sbjct: 297 AEINKKGKLRSVVRFHQYIYSVPYSEHSCFPEIEDFIKLVQPINIKGIVSSSFCYIEPLY 356
Query: 322 YFGRLCRANQPPLRY--KQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRRRTAEVGVLGV 379
YFG LC N R K E+R +++ + A K SG S D + R+ ++ LG
Sbjct: 357 YFGGLCGVNPSSQRLPRKSERREKYENIEA---KTKSNSGSSNFTDAENRKR-KIDFLGS 412
Query: 380 HMSKVDALRRARRGAKLARSES 401
H+ +V LRRA+RG K+ ++S
Sbjct: 413 HLRRVSILRRAQRGVKIVENDS 434
>gi|224113605|ref|XP_002332533.1| predicted protein [Populus trichocarpa]
gi|222832669|gb|EEE71146.1| predicted protein [Populus trichocarpa]
Length = 360
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/372 (57%), Positives = 263/372 (70%), Gaps = 52/372 (13%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
MEKGLISVDR+T+ SQ YFLTHLH+DHTQGL+S W +GPLFCS+LTAKL P KFP +LS
Sbjct: 1 MEKGLISVDRFTKSSQAYFLTHLHTDHTQGLTSKWGKGPLFCSKLTAKLLPFKFPDFNLS 60
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
L+R HS S++SP++G + V+A+D +HCPG+ VM LFRG+FGCL+YTGD
Sbjct: 61 LLR-------HSFSLISPTTGSQITAHVMALDTHHCPGV----VMFLFRGEFGCLMYTGD 109
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ--------- 171
F+WE ++RA+ R+ L+ LK++ VD+LYLDNTYCN SY FP+REVAAQQ
Sbjct: 110 FQWEVDSKRAKDARSRLLNVLKNETVDVLYLDNTYCNPSYDFPTREVAAQQVVDIIASHL 169
Query: 172 ---------------------------IWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVP 204
IW+W ERLQTMHLLGFHD FTTK SLTRVRAVP
Sbjct: 170 EHDIVIGIDTLGKEELLIHISRVLNIKIWLWLERLQTMHLLGFHDTFTTKNSLTRVRAVP 229
Query: 205 RYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTE 264
YS S++TLE LNTM PTIGIMPSGLPWV+KP+KG +L GSL +S K + ++
Sbjct: 230 CYSLSVETLEGLNTMRPTIGIMPSGLPWVLKPVKGDDNLFGSLLTSRYKKRQP-----SD 284
Query: 265 KLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFG 324
KL L +R+H+Y++SVPYS H CF EI+EF+ LVQP+N++GIVSSSSCYVDPLYYF
Sbjct: 285 KLDGNLAYAERYHQYMFSVPYSYHLCFAEIQEFIELVQPANMKGIVSSSSCYVDPLYYFS 344
Query: 325 RLCRANQPPLRY 336
RL NQPP R+
Sbjct: 345 RLYGVNQPPKRF 356
>gi|15223519|ref|NP_174061.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
thaliana]
gi|9802533|gb|AAF99735.1|AC004557_14 F17L21.20 [Arabidopsis thaliana]
gi|17473671|gb|AAL38292.1| unknown protein [Arabidopsis thaliana]
gi|20148601|gb|AAM10191.1| unknown protein [Arabidopsis thaliana]
gi|332192705|gb|AEE30826.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
thaliana]
Length = 422
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/421 (52%), Positives = 271/421 (64%), Gaps = 62/421 (14%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
ME GLISVDRW GSQ YFLTH+HSDHT+GLS W++GPL+CSR TA LFP +FPG DLS
Sbjct: 1 MESGLISVDRWRNGSQAYFLTHIHSDHTRGLSGGWSQGPLYCSRTTASLFPSRFPGFDLS 60
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
L+RV+ + SW S+S+ SPSSG + ++AIDA+HCPG S+M LFRGDFGC LYTGD
Sbjct: 61 LLRVVPLFSWTSLSLRSPSSGSTVRLHLMAIDAHHCPG----SIMFLFRGDFGCFLYTGD 116
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ---------- 170
FRW++ + ++ R TLV A+ + VDILYLDNTYCN Y+FPSR VA Q
Sbjct: 117 FRWDS--DASDEARTTLVAAIDEFPVDILYLDNTYCNPIYSFPSRLVAVQLVADIIASHP 174
Query: 171 --------------------------QIWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVP 204
+IWVWPERL+TMHLLGF DIFTT TSLTRVRAVP
Sbjct: 175 SHDIIIAVDSLGKEDLLVHVSRILNIKIWVWPERLRTMHLLGFQDIFTTDTSLTRVRAVP 234
Query: 205 RYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTE 264
RYSFSI TLE LNTM PTIGIMPSGLPWV +P KG L GS ++ + + E
Sbjct: 235 RYSFSIQTLEGLNTMCPTIGIMPSGLPWVKRPFKGDDKLSGSFLTASMKNETVSAKKELE 294
Query: 265 KLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFG 324
+V +FH Y+YSV YSDHSC+ EI EF+ LV+P +++GIV SSS YVDPLYYFG
Sbjct: 295 A-----AAVHKFHDYMYSVHYSDHSCYEEIGEFIKLVKPKSMKGIVVSSSSYVDPLYYFG 349
Query: 325 RLCRANQPP---------------LRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRR 369
R+C ANQPP +R K ++A + ++ +S S K ++KR
Sbjct: 350 RICGANQPPQVLLMRPDIAEEFRAVRIKSYSASDKTRMLAKEKRWKRDSHSSLKRNKKRA 409
Query: 370 R 370
R
Sbjct: 410 R 410
>gi|297845690|ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
lyrata]
gi|297336568|gb|EFH66985.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/421 (52%), Positives = 270/421 (64%), Gaps = 62/421 (14%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
ME GLISVDRW +GSQ YFLTH+ SDHT+GLS W++GPL+CSR+TA LFP +FPG DLS
Sbjct: 1 MESGLISVDRWRKGSQAYFLTHMQSDHTRGLSGGWSKGPLYCSRITASLFPSRFPGFDLS 60
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
L+RV+ + SW S+S+ SPSSG + +AIDA+HCPG S+M LFRGDFGC LYTGD
Sbjct: 61 LLRVVPLYSWTSLSLRSPSSGSTVRLHFMAIDAHHCPG----SMMFLFRGDFGCFLYTGD 116
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ---------- 170
FRW+A + ++ R LV A+ + VDILYLDNTYCN Y+FPSR+VAAQ
Sbjct: 117 FRWDA--DASDEARTILVDAIHEFPVDILYLDNTYCNPIYSFPSRQVAAQLVADIIASHP 174
Query: 171 --------------------------QIWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVP 204
+IWVWPERL+TMHLLGF D+FTT TSLTRVRAVP
Sbjct: 175 SHDIIIAVDSLGKEELLLHVSRVLNIKIWVWPERLRTMHLLGFQDVFTTDTSLTRVRAVP 234
Query: 205 RYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTE 264
RYSFSI TLE LNTM PTIGIMPSGLPWV P KG L GS ++ + + E
Sbjct: 235 RYSFSIQTLEGLNTMCPTIGIMPSGLPWVKTPFKGDDKLSGSFLTASMKNETISAQKELE 294
Query: 265 KLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFG 324
+V +FH Y+YSV YSDHSC+ EI EF+ LV+P +++GIV SSS YVDPLYYFG
Sbjct: 295 A-----AAVHKFHDYMYSVHYSDHSCYEEIGEFIKLVKPKSMKGIVVSSSSYVDPLYYFG 349
Query: 325 RLCRANQPP---------------LRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRR 369
R+C ANQPP +R K V+ + ++ +S S K ++KR
Sbjct: 350 RICGANQPPQVLLMRPDIADEFQAVRIKSYSATDKTRVLEKEKRWKRDSHSSLKRNKKRA 409
Query: 370 R 370
R
Sbjct: 410 R 410
>gi|356544862|ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
Length = 437
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/447 (48%), Positives = 284/447 (63%), Gaps = 58/447 (12%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
MEK LISVDRW EGS+ YFLTHLHSDHT GL+ +W PLFCS +TAKL P KFPG DLS
Sbjct: 1 MEKRLISVDRWAEGSEAYFLTHLHSDHTHGLTPSWHHAPLFCSAVTAKLLPFKFPGFDLS 60
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
L+R+L G+ H++++ S + + V +DA HCPG S+MLLFRGDFGC+LYTGD
Sbjct: 61 LLRILHPGTTHTVTLPSLT------LHVTVMDACHCPG----SIMLLFRGDFGCILYTGD 110
Query: 121 FRWEASNERAEIGRNTLVKALKD-DVVDILYLDNTYCNSSYAFPSREVAAQQI------- 172
FRWEA+ ERA R+ L AL+ VD+++LDNTY N Y FP R VAAQQI
Sbjct: 111 FRWEATCERATKSRHVLRDALRHVPAVDVVHLDNTYSNPIYDFPPRHVAAQQIIDIIASH 170
Query: 173 -----------------------------WVWPERLQTMHLLGFHDIFTTKTSLTRVRAV 203
WVWP+RL+TMHLLG+ DIFTT TSLTRVRAV
Sbjct: 171 PDHEVIIGINTLGKEDLLVEISRALQIMIWVWPQRLRTMHLLGYDDIFTTNTSLTRVRAV 230
Query: 204 PRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQT 263
P YSFSI+T+E LN + PTIGIMPSGLPW+ K + GS +S + + + T+T
Sbjct: 231 PVYSFSINTVEELNYVCPTIGIMPSGLPWIKKSHQKNELQTGSFLTSRYKRGKLSANTET 290
Query: 264 EKLKEAL--GSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLY 321
+ K+ + GS ++ HKYIY+VPYSDHS + EIE+F+ LV+P+ ++GIVSSSSCY++P+Y
Sbjct: 291 QIDKQIVKTGSPEKIHKYIYTVPYSDHSNYEEIEDFVKLVKPTTLKGIVSSSSCYIEPMY 350
Query: 322 YFGRLCRANQPP------LRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRRRTAEVG 375
YFGRLC NQ + K+ + + + V ++ F G + + R R + +
Sbjct: 351 YFGRLCPGNQQTDQVHEGCKGKENGKREREEAVRSKTLFE---GDNFETGRDRGKALKGR 407
Query: 376 VLGVHMSKVDALRRARRGAKLARSESS 402
GVH+S++ LR+ RRGAK+ + S
Sbjct: 408 FSGVHVSRLSILRKKRRGAKIQEHDDS 434
>gi|357125358|ref|XP_003564361.1| PREDICTED: 5' exonuclease Apollo-like [Brachypodium distachyon]
Length = 436
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 254/442 (57%), Gaps = 54/442 (12%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSS--AWARGPLFCSRLTAKLFPLKFPGLD 58
M++G++SVD+++ GSQ YFLTHLH DHT+GL + W GPL+CS +TA+L P +FPG+D
Sbjct: 1 MDEGVVSVDKFSGGSQAYFLTHLHQDHTRGLDAVRGWRHGPLYCSPITARLLPTRFPGID 60
Query: 59 LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYT 118
+SL+R + G+ S+S+ SP SG + V AI A HCPG S+M LFRGD GC LYT
Sbjct: 61 VSLLRPIAPGASASLSLTSPISGRPISLLVTAIPALHCPG----SLMYLFRGDLGCRLYT 116
Query: 119 GDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ------- 171
GDFRWE E A + L+ AL D VD+LYLDNTYC S FP R V A+Q
Sbjct: 117 GDFRWELGCEEARSAKKALLHALAGDSVDVLYLDNTYCYPSLNFPPRRVVAEQIVNIIQA 176
Query: 172 -----------------------------IWVWPERLQTMHLLGFHD---IFTTKTSLTR 199
IWVWP+RL TMHLLG D IFTT+TSLTR
Sbjct: 177 HPDHEVIIGVDTLGKEDLLLHLSRALQMKIWVWPQRLLTMHLLGIDDNQEIFTTQTSLTR 236
Query: 200 VRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPG-SLFSSYQSKWRAT 258
+RAVPRYS +I++LE+LNT+ PTIGIMPSG+PW+ K +G G S S++ K +
Sbjct: 237 IRAVPRYSLTIESLEALNTVCPTIGIMPSGIPWLWKNSEGKAKSSGKSPTKSFRCKAQER 296
Query: 259 GGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVD 318
E + L F Y++PYS+H+CF+E+E F+ V+PS + GIVS S CYV+
Sbjct: 297 DVGTIEMDYDPLSPPKLFENDSYALPYSEHACFSELEAFMQAVRPSTVMGIVSRSFCYVN 356
Query: 319 PLYYFGRLCRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRRRTAEVGVLG 378
P ++FG LCR + Y + V+ + SG +R R ++
Sbjct: 357 PRHHFGHLCRDDV----YSDKTPVKKSGHTGSLTPKRRPSGSKTPKERMVRISSST---- 408
Query: 379 VHMSKVDALRRARRGAKLARSE 400
+ S+V R+ RGA++ E
Sbjct: 409 LFRSRVIMKRKECRGARIEEPE 430
>gi|224029987|gb|ACN34069.1| unknown [Zea mays]
gi|413952236|gb|AFW84885.1| hypothetical protein ZEAMMB73_126664 [Zea mays]
Length = 438
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 256/442 (57%), Gaps = 52/442 (11%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSS--AWARGPLFCSRLTAKLFPLKFPGLD 58
ME+GL+SVD+++ GSQ YFLTHLH DHT+GL + W GPL+CS TA+L P++FPG+D
Sbjct: 1 MEEGLVSVDKFSGGSQAYFLTHLHQDHTRGLGAVGGWRHGPLYCSPTTARLLPIRFPGID 60
Query: 59 LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYT 118
SL+R L G+ SI + SPSSG+ + V AI A HCPG S+M LFRGD GC+LYT
Sbjct: 61 ASLLRPLAPGASASIYLFSPSSGQSLSLHVTAIPALHCPG----SLMYLFRGDLGCMLYT 116
Query: 119 GDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ------- 171
GDFRWE + A + L+ AL D +D+LYLDNTYC+ S FP R V A+Q
Sbjct: 117 GDFRWELGCDEARRAKQDLLDALDGDTIDVLYLDNTYCHPSLNFPPRPVVAEQVIDIIRS 176
Query: 172 -----------------------------IWVWPERLQTMHLLGF---HDIFTTKTSLTR 199
IWVWP+RLQT+HLLG DIFTT+TSLTR
Sbjct: 177 HPDHEVIIGVDTLGKEDLLLHISRALQTKIWVWPQRLQTIHLLGIDENRDIFTTQTSLTR 236
Query: 200 VRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPG-SLFSSYQSKWRAT 258
+RAVPRYS +ID LE+LNT+ PTIGI+PS +P + K +G G S S +S R
Sbjct: 237 IRAVPRYSVTIDNLEALNTVCPTIGILPSAIPCLWKSSEGKAKSKGRSSVKSIRSSGRGE 296
Query: 259 GGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVD 318
G T+ + L F K Y++PYS+H+CF+E+E+F++ V+P + GIVSSS CYV+
Sbjct: 297 GLTEMD--CNPLSPPKLFDKDSYTLPYSEHACFSELEDFMHTVRPWTVSGIVSSSFCYVN 354
Query: 319 PLYYFGRLCRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRRRTAEVGVLG 378
P ++F LC N + K K + R+ V K R+ +
Sbjct: 355 PRHHFRHLCLDNN---VNDETDMTPIKNKGRDNDKLTPKRWRNGSVTPKERK-VRISSSS 410
Query: 379 VHMSKVDALRRARRGAKLARSE 400
++ SKV R+ GA++ +E
Sbjct: 411 LYRSKVTMKRKECCGARINDTE 432
>gi|20804871|dbj|BAB92553.1| DNA cross-link repair 1B-like protein [Oryza sativa Japonica Group]
gi|125572255|gb|EAZ13770.1| hypothetical protein OsJ_03695 [Oryza sativa Japonica Group]
Length = 416
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 187/412 (45%), Positives = 252/412 (61%), Gaps = 52/412 (12%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSA--WARGPLFCSRLTAKLFPLKFPGLD 58
M++GL+SVD+++ GSQ YFLTHLH DHT+GL +A W GPL+CS +TA+L P +FPG+D
Sbjct: 1 MDEGLVSVDKFSGGSQAYFLTHLHQDHTRGLGAAGGWRHGPLYCSPVTARLLPTRFPGVD 60
Query: 59 LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYT 118
SL+R L G+ S+S+ SPS+G V V AI A HCPG S+M LFRGD GC+LYT
Sbjct: 61 ASLLRPLAPGASASLSLSSPSTGRAVSVVVTAIPALHCPG----SLMYLFRGDLGCMLYT 116
Query: 119 GDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ------- 171
GDFRWE +RA + L+ AL D VD+LYLDNTYC+ S +FP R + A+Q
Sbjct: 117 GDFRWELRCKRARAAKKALLDALAGDTVDVLYLDNTYCHPSLSFPPRPIVAEQIVNIIRA 176
Query: 172 ------------------------------IWVWPERLQTMHLLGFHD---IFTTKTSLT 198
IWVWP+RLQT+HLLG D IFTT+TSLT
Sbjct: 177 HPDHEIIIGVDTLGKEDLLLHISRALQTKVIWVWPQRLQTIHLLGIDDNQEIFTTQTSLT 236
Query: 199 RVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKG-GGSLPGSLFSSYQSKWRA 257
R+RAVPRYS +I++L++LNT+ PTIGIMPSG+PW+ K KG S S S + K
Sbjct: 237 RIRAVPRYSLTIESLDALNTVCPTIGIMPSGIPWLWKNSKGKAKSGVKSPAKSIRCKGLD 296
Query: 258 TGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYV 317
G + + + L F K YS+PYS+H+CF E+E F+ +V+PS + GIVS+S CYV
Sbjct: 297 EGAIEMD--YDPLSPPKLFEKDSYSLPYSEHACFAELENFMLIVRPSTVIGIVSTSFCYV 354
Query: 318 DPLYYFGRLCRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRR 369
+P ++F LC N + ++ + + +V+ + + N G DRK R
Sbjct: 355 NPRHHFSHLCADNVYSDKTPEKNKGKDISVLTPKKRQN---GSKTPKDRKIR 403
>gi|218189175|gb|EEC71602.1| hypothetical protein OsI_03999 [Oryza sativa Indica Group]
Length = 432
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 193/443 (43%), Positives = 262/443 (59%), Gaps = 60/443 (13%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSA--WARGPLFCSRLTAKLFPLKFPGLD 58
M++GL+SVD+++ GSQ YFLTHLH DHT+GL +A W GPL+CS +TA+ P +FPG+D
Sbjct: 1 MDEGLVSVDKFSGGSQAYFLTHLHQDHTRGLGAAGGWRHGPLYCSPVTARPLPTRFPGVD 60
Query: 59 LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYT 118
SL+R L G+ S+S+ SPS+G V V AI A HCPG S+M LFRGD GC+LYT
Sbjct: 61 ASLLRPLAPGASASLSLSSPSTGRAVSVVVTAIPALHCPG----SLMYLFRGDLGCMLYT 116
Query: 119 GDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ------- 171
GDFRWE ERA + L+ AL D VD+LYLDNTYC+ S +FP R + A+Q
Sbjct: 117 GDFRWELRCERARAAKKALLDALAGDTVDVLYLDNTYCHPSLSFPPRPIVAEQIVNIVRA 176
Query: 172 ------------------------------IWVWPERLQTMHLLGFHD---IFTTKTSLT 198
IWVWP+RLQT HLLG D IFTT+TSLT
Sbjct: 177 HPDHEIIIGVDTLGKEDLLLHISRALQTKVIWVWPQRLQTTHLLGIDDNQEIFTTQTSLT 236
Query: 199 RVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKG-GGSLPGSLFSSYQSKWRA 257
R+RAVPRYS +I++L++LNT+ PTIGIMPSG+PW+ K KG S S S + K
Sbjct: 237 RIRAVPRYSLTIESLDALNTVCPTIGIMPSGIPWLWKNSKGKAKSGVKSPAKSIRCKGLD 296
Query: 258 TGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYV 317
G + + + L F K YS+PYS+H+CF E+E+F+ V+PS + GIVS+S CYV
Sbjct: 297 EGAIEMD--YDPLSPPKLFEKDSYSLPYSEHACFAELEDFMLTVRPSTVIGIVSTSFCYV 354
Query: 318 DPLYYFGRLCRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRRRTAEVGVL 377
+P ++F LC N + ++ + + +V+ + + N G ++K R
Sbjct: 355 NPRHHFSHLCADNVYSDKTPEKNKGKDISVLTPKKRQN---GSKTPKEKKIRI------- 404
Query: 378 GVHMSKVDALRRARRGAKLARSE 400
V+ S+V R+ GAK+ E
Sbjct: 405 -VYGSRVTMKRKECCGAKIVEPE 426
>gi|242058925|ref|XP_002458608.1| hypothetical protein SORBIDRAFT_03g036570 [Sorghum bicolor]
gi|241930583|gb|EES03728.1| hypothetical protein SORBIDRAFT_03g036570 [Sorghum bicolor]
Length = 401
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 243/441 (55%), Gaps = 87/441 (19%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSA--WARGPLFCSRLTAKLFPLKFPGLD 58
ME+GL+SVD+++ GSQ YFLTHLH DHT+GL +A W GPL+CS TA+L P +FPG+D
Sbjct: 1 MEEGLVSVDKFSGGSQAYFLTHLHQDHTRGLGAAGGWRHGPLYCSPTTARLLPSRFPGID 60
Query: 59 LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYT 118
SLIR L G+ SIS+ S SG+ V V AI A HCPG S+M LFRGD GC+LYT
Sbjct: 61 ASLIRPLAPGASASISLSS-PSGQPLSVRVTAIPALHCPG----SLMYLFRGDLGCMLYT 115
Query: 119 GDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ-------- 170
GDFRWE ++A + L+ AL D +D+LYLDNTYC+ S FPSR V A+
Sbjct: 116 GDFRWELGCDKARRAKQALLDALGGDTIDVLYLDNTYCHPSLNFPSRPVVAEHMVDIIRA 175
Query: 171 ----------------------------QIWVWPERLQTMHLLGF---HDIFTTKTSLTR 199
+IWVWP+RL T+HLLG +IFTT+TSLTR
Sbjct: 176 HPDHEVIIGVDTLGKEDLLLHISRALQTKIWVWPQRLLTIHLLGIDENREIFTTQTSLTR 235
Query: 200 VRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG 259
+RAVPRYS +ID LE+LNT+ PTIGIMPSG+PW+ W+++
Sbjct: 236 IRAVPRYSVTIDNLEALNTVCPTIGIMPSGIPWL---------------------WKSSE 274
Query: 260 GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDP 319
G K + +L S+ + E+E+F++ + PS + GIVSSS CYV+P
Sbjct: 275 GKVKSKGRSSLKSIGCLGR--------------ELEDFMHTMHPSTVIGIVSSSFCYVNP 320
Query: 320 LYYFGRLCRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRRRTAEVGVLGV 379
++F C + + R K K + R+ V+ + R+ + +
Sbjct: 321 RHHFRHFCLDSN-----ANDDRTPIKNKCGDNDKLTPKRRRNGSVNPEERK-VRIYSSSL 374
Query: 380 HMSKVDALRRARRGAKLARSE 400
+ S+V RR GA++ +E
Sbjct: 375 YRSRVTMKRRECCGARIHDTE 395
>gi|413952235|gb|AFW84884.1| hypothetical protein ZEAMMB73_126664 [Zea mays]
Length = 374
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 222/441 (50%), Gaps = 114/441 (25%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSS--AWARGPLFCSRLTAKLFPLKFPGLD 58
ME+GL+SVD+++ GSQ YFLTHLH DHT+GL + W GPL+CS TA+L P++FPG+D
Sbjct: 1 MEEGLVSVDKFSGGSQAYFLTHLHQDHTRGLGAVGGWRHGPLYCSPTTARLLPIRFPGID 60
Query: 59 LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYT 118
SL+R L PG S+M LFRGD GC+LYT
Sbjct: 61 ASLLRPL------------------------------APG----SLMYLFRGDLGCMLYT 86
Query: 119 GDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ------- 171
GDFRWE + A + L+ AL D +D+LYLDNTYC+ S FP R V A+Q
Sbjct: 87 GDFRWELGCDEARRAKQDLLDALDGDTIDVLYLDNTYCHPSLNFPPRPVVAEQVIDIIRS 146
Query: 172 -----------------------------IWVWPERLQTMHLLGF---HDIFTTKTSLTR 199
IWVWP+RLQT+HLLG DIFTT+TSLTR
Sbjct: 147 HPDHEVIIGVDTLGKEDLLLHISRALQTKIWVWPQRLQTIHLLGIDENRDIFTTQTSLTR 206
Query: 200 VRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG 259
+RAVPRYS +ID LE+LNT+ PTIGI+PS +P + W+++
Sbjct: 207 IRAVPRYSVTIDNLEALNTVCPTIGILPSAIPCL---------------------WKSSE 245
Query: 260 GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDP 319
G K + ++ S+ S E+E+F++ V+P + GIVSSS CYV+P
Sbjct: 246 GKAKSKGRSSVKSI--------------RSSGRELEDFMHTVRPWTVSGIVSSSFCYVNP 291
Query: 320 LYYFGRLCRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRRRTAEVGVLGV 379
++F LC N + K K + R+ V K R+ + +
Sbjct: 292 RHHFRHLCLDNN---VNDETDMTPIKNKGRDNDKLTPKRWRNGSVTPKERK-VRISSSSL 347
Query: 380 HMSKVDALRRARRGAKLARSE 400
+ SKV R+ GA++ +E
Sbjct: 348 YRSKVTMKRKECCGARINDTE 368
>gi|302784836|ref|XP_002974190.1| hypothetical protein SELMODRAFT_100130 [Selaginella moellendorffii]
gi|300158522|gb|EFJ25145.1| hypothetical protein SELMODRAFT_100130 [Selaginella moellendorffii]
Length = 415
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 201/352 (57%), Gaps = 56/352 (15%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDI 67
VD W S YFLTHLH+DHT+GLS+ W RGPL+CS++TA L +F G + +L+ +LD+
Sbjct: 7 VDEWRSPSDAYFLTHLHADHTEGLSADWCRGPLYCSQVTAMLLLARFKGFNPALLHILDL 66
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASN 127
G + ++VS ++ + +EV AIDA+HCPG +VM +F G+FGC+L+TGDFRW
Sbjct: 67 G---TPTLVSSNNAADSLLEVTAIDADHCPG----AVMYVFHGEFGCVLHTGDFRWNNDR 119
Query: 128 ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAA------------------ 169
E + L +A+ VD LYLDNT+CN + FPSR AA
Sbjct: 120 CTLEERKEALREAIGGAQVDFLYLDNTFCNPLFCFPSRNAAATRVIELIRGHPEKDIVIG 179
Query: 170 ------------------QQIWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSID 211
+I VWP+RL+TMHLL D+FTT TS+TR+RAVPR S S
Sbjct: 180 IDNLGKEELLLSIAQALETKICVWPQRLKTMHLLQLPDVFTTDTSITRIRAVPRCSVSTR 239
Query: 212 TLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSS--YQSKWRATGGTQTEKLKEA 269
+L+ LN + PT+GI+P+G + P G P L S Y+S+ R +
Sbjct: 240 SLKLLNEIRPTLGILPTGCLCLCNPSSGRKPKPKLLCSESCYKSRERTSDNQ-------- 291
Query: 270 LGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCY-VDPL 320
+ D + I VPYS H CF+E +F++L++P ++ GIV SS+ Y ++P+
Sbjct: 292 --AADASSRLINVVPYSLHCCFSEARDFVDLIRPKSVLGIVKSSTDYSINPI 341
>gi|224034545|gb|ACN36348.1| unknown [Zea mays]
Length = 336
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 134/336 (39%), Positives = 181/336 (53%), Gaps = 46/336 (13%)
Query: 105 MLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPS 164
M LFRGD GC+LYTGDFRWE + A + L+ AL D +D+LYLDNTYC+ S FP
Sbjct: 1 MYLFRGDLGCMLYTGDFRWELGCDEARRAKQDLLDALDGDTIDVLYLDNTYCHPSLNFPP 60
Query: 165 REVAAQQ------------------------------------IWVWPERLQTMHLLGF- 187
R V A+Q IWVWP+RLQT+HLLG
Sbjct: 61 RPVVAEQVIDIIRSHPDHEVIIGVDTLGKEDLLLHISRALQTKIWVWPQRLQTIHLLGID 120
Query: 188 --HDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPG 245
DIFTT+TSLTR+RAVPRYS +ID LE+LNT+ PTIGI+PS +P + K +G G
Sbjct: 121 ENRDIFTTQTSLTRIRAVPRYSVTIDNLEALNTVCPTIGILPSAIPCLWKSSEGKAKSKG 180
Query: 246 -SLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPS 304
S S +S R G T+ + L F K Y++PYS+H+CF+E+E+F++ V+P
Sbjct: 181 RSSVKSIRSSGRGEGLTEMD--CNPLSPPKLFDKDSYTLPYSEHACFSELEDFMHTVRPW 238
Query: 305 NIRGIVSSSSCYVDPLYYFGRLCRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKV 364
+ GIVSSS CYV+P ++F LC N + K K + R+ V
Sbjct: 239 TVSGIVSSSFCYVNPRHHFRHLCLDNN---VNDETDMTPIKNKGRDNDKLTPKRWRNGSV 295
Query: 365 DRKRRRTAEVGVLGVHMSKVDALRRARRGAKLARSE 400
K R+ + ++ SKV R+ GA++ +E
Sbjct: 296 TPKERK-VRISSSSLYRSKVTMKRKECCGARINDTE 330
>gi|212274939|ref|NP_001130918.1| uncharacterized protein LOC100192022 [Zea mays]
gi|194690442|gb|ACF79305.1| unknown [Zea mays]
gi|413952237|gb|AFW84886.1| hypothetical protein ZEAMMB73_126664 [Zea mays]
Length = 229
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 122/174 (70%), Gaps = 6/174 (3%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSS--AWARGPLFCSRLTAKLFPLKFPGLD 58
ME+GL+SVD+++ GSQ YFLTHLH DHT+GL + W GPL+CS TA+L P++FPG+D
Sbjct: 1 MEEGLVSVDKFSGGSQAYFLTHLHQDHTRGLGAVGGWRHGPLYCSPTTARLLPIRFPGID 60
Query: 59 LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYT 118
SL+R L G+ SI + SPSSG+ + V AI A HCPG S+M LFRGD GC+LYT
Sbjct: 61 ASLLRPLAPGASASIYLFSPSSGQSLSLHVTAIPALHCPG----SLMYLFRGDLGCMLYT 116
Query: 119 GDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
GDFRWE + A + L+ AL D +D+LYLDNTYC+ S FP R V A+Q+
Sbjct: 117 GDFRWELGCDEARRAKQDLLDALDGDTIDVLYLDNTYCHPSLNFPPRPVVAEQV 170
>gi|297597742|ref|NP_001044453.2| Os01g0783400 [Oryza sativa Japonica Group]
gi|255673755|dbj|BAF06367.2| Os01g0783400 [Oryza sativa Japonica Group]
Length = 217
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 125/174 (71%), Gaps = 6/174 (3%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSA--WARGPLFCSRLTAKLFPLKFPGLD 58
M++GL+SVD+++ GSQ YFLTHLH DHT+GL +A W GPL+CS +TA+L P +FPG+D
Sbjct: 30 MDEGLVSVDKFSGGSQAYFLTHLHQDHTRGLGAAGGWRHGPLYCSPVTARLLPTRFPGVD 89
Query: 59 LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYT 118
SL+R L G+ S+S+ SPS+G V V AI A HCPG S+M LFRGD GC+LYT
Sbjct: 90 ASLLRPLAPGASASLSLSSPSTGRAVSVVVTAIPALHCPG----SLMYLFRGDLGCMLYT 145
Query: 119 GDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
GDFRWE +RA + L+ AL D VD+LYLDNTYC+ S +FP R + A+Q+
Sbjct: 146 GDFRWELRCKRARAAKKALLDALAGDTVDVLYLDNTYCHPSLSFPPRPIVAEQV 199
>gi|73620753|sp|Q5QJC3.1|DCR1B_CHICK RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
gi|38731581|gb|AAR27405.1| SNM1B [Gallus gallus]
Length = 457
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 163/353 (46%), Gaps = 108/353 (30%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFP--LKFPGLDL 59
I+VD W+ G++++FL+H+HSDHT GLSS W+R PL+CS LTA+L LK P
Sbjct: 11 IAVDFWSVRRAGGARLFFLSHMHSDHTVGLSSTWSR-PLYCSPLTARLLHHRLKVP---T 66
Query: 60 SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTG 119
IR L++G H++ GE+ V V +DANHCPG SVM LF G FG +LYTG
Sbjct: 67 RWIRPLEVGQSHAV-------GEE--VTVTLLDANHCPG----SVMFLFEGAFGTILYTG 113
Query: 120 DFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ-------- 171
DFR+ + +R AL +D LYLDNT C A PSR AA Q
Sbjct: 114 DFRYSPAMQRE--------PALSGRRIDRLYLDNTNCRPHGALPSRSRAALQAAQLIRRH 165
Query: 172 ----------------------------IWVWPERLQTMHLLGFHDIFTTKTSLTRVRAV 203
+ V P RL+ M LL ++FTT+ R+ AV
Sbjct: 166 PQHRVVIGVYSLGKEELLVDLALEFGTWVVVSPSRLEQMRLLELPEVFTTEEGAGRIHAV 225
Query: 204 PRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQT 263
DTL S N +HPTI I+P+G P
Sbjct: 226 DVAEIRWDTLVSWNVLHPTIAILPTGRP-------------------------------- 253
Query: 264 EKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCY 316
V H I+ +PYSDHS F+E+ EF+ ++P ++ IV CY
Sbjct: 254 ---------VKVTHPQIHLIPYSDHSSFSELCEFVKWLKPCSVIPIVKGDMCY 297
>gi|449271670|gb|EMC81954.1| DNA cross-link repair 1B protein, partial [Columba livia]
Length = 450
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 174/376 (46%), Gaps = 105/376 (27%)
Query: 8 VDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIR 63
VD W+ ++++FL+H+HSDHT GL+S W R PL+CS LTA+L + + + IR
Sbjct: 1 VDFWSVRKAGSARLFFLSHMHSDHTVGLTSTWCR-PLYCSPLTARLLHRRL-QVPMCWIR 58
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
L++G H + GE+ V V +D+NHCPG SVM LF G FG +LYTGDFR+
Sbjct: 59 PLEVGQSHVL-------GEEVTVTVTLLDSNHCPG----SVMFLFEGAFGTILYTGDFRY 107
Query: 124 EASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ------------ 171
+S + AL+ +D LYLDNT+C+ A PSR++A +Q
Sbjct: 108 SSSMQGE--------PALRGRHIDRLYLDNTHCHPEQALPSRQLATRQAAHLIRTHPQHH 159
Query: 172 ------------------------IWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYS 207
+ V P RL+ M LL D+FT++ +RAV
Sbjct: 160 VVIGVYSLGKETLLVDLAMEFSTWVVVSPWRLEQMRLLELPDVFTSEEGAGWIRAVDVAE 219
Query: 208 FSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLK 267
DTL + NT+HPTI I+P+G P
Sbjct: 220 IRWDTLVTWNTLHPTIAILPTGRP------------------------------------ 243
Query: 268 EALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
V H I+++PYSDHS F E+ EF+ ++P ++ IV +C Y+ L
Sbjct: 244 -----VKVTHPKIHTIPYSDHSSFLELCEFVKWLKPCSVIPIVKGGTCQT---YFQKYLS 295
Query: 328 RANQPPLRYKQEKRVQ 343
A Q ++ K VQ
Sbjct: 296 SAPQALPDFQIPKPVQ 311
>gi|327271542|ref|XP_003220546.1| PREDICTED: 5' exonuclease Apollo-like [Anolis carolinensis]
Length = 563
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 164/352 (46%), Gaps = 97/352 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W ++++FL+H+H+DHT GLSS W R P++CS LT ++ LK +
Sbjct: 11 IAVDFWNIRKAAQARLFFLSHMHTDHTVGLSSTWNR-PIYCSPLTGQILRLKL-KVSEQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I L++G H +++ G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IHPLEVGESHVLAL--DEIGKETMT-VTLIDANHCPG----SVMFLFEGYFGIILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ + ++ E +N +++ LYLDNT C S+ PSRE A +QI
Sbjct: 122 RYSPNMQQEEALKN-------KKLINTLYLDNTNCYPSFVLPSRETATEQIKEVIRAHPS 174
Query: 173 -------------------------W--VWPERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
W V P RL+ MHLLG D+FT++ R+ AV
Sbjct: 175 HLVKIGIYTLGRESLLVELAHEFHTWIVVSPRRLEIMHLLGLDDVFTSEEWAGRIHAVDF 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
T+ S N +HPTI ++P+ P
Sbjct: 235 SEIRQATMISWNQIHPTIAVLPTSRP---------------------------------- 260
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYV 317
V H Y VPYSDHS F E+ EF+ ++P +I +V S +C +
Sbjct: 261 -------VKINHPGAYVVPYSDHSSFEELLEFVAWLKPCSIIPVVKSETCQI 305
>gi|347921037|ref|NP_001026671.2| 5' exonuclease Apollo [Gallus gallus]
Length = 504
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 161/354 (45%), Gaps = 108/354 (30%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF--PLKFPGLDL 59
I+VD W+ G++++FL+H+HSDHT GLSS + PL+CS LTA+L LK P
Sbjct: 58 IAVDFWSVRRAGGARLFFLSHMHSDHTVGLSST-SFSPLYCSPLTARLLYHRLKVP---T 113
Query: 60 SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTG 119
IR L++G H++ GE+ V V +DANHCPG SVM LF G FG +LYTG
Sbjct: 114 RWIRPLEVGQSHAV-------GEE--VTVTLLDANHCPG----SVMFLFEGAFGTILYTG 160
Query: 120 DFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ-------- 171
DFR+ + +R AL +D LYLDNT C A PSR AA Q
Sbjct: 161 DFRYSPAMQRE--------PALSGRRIDRLYLDNTNCRPHGALPSRSRAALQAAQLIRRH 212
Query: 172 ----------------------------IWVWPERLQTMHLLGFHDIFTTKTSLTRVRAV 203
+ V P RL+ M LL ++FTT+ R+ AV
Sbjct: 213 PQHRVVIGVYSLGKEELLVDLALEFGTWVVVSPSRLEQMRLLELPEVFTTEEGAGRIHAV 272
Query: 204 PRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQT 263
DTL S N +HPTI I+P+G P
Sbjct: 273 DVAEIRWDTLVSWNVLHPTIAILPTGRP-------------------------------- 300
Query: 264 EKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYV 317
V H I+ +PYSDHS F+E+ EF+ ++P ++ IV CY
Sbjct: 301 ---------VKVTHPQIHLIPYSDHSSFSELCEFVKWLKPCSVIPIVKGDMCYA 345
>gi|306755663|sp|B0V2S2.1|DCR1B_DANRE RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
Length = 571
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 177/404 (43%), Gaps = 106/404 (26%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W +++FL+H+HSDHT GLSS W+ P++CS LTAKL LK +
Sbjct: 11 IAVDCWQLRKCLHVRLFFLSHMHSDHTCGLSSTWSHRPIYCSPLTAKLLRLKL-QIKQKW 69
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L+IG H + + K + V IDANHCPG +VM LF+G FG LYTGDF
Sbjct: 70 IRPLEIGQDHMLML---DDLGKERLTVNLIDANHCPG----AVMFLFQGYFGTRLYTGDF 122
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S R +N + +D+LYLDNT C+ + A PSR+ A QQI
Sbjct: 123 RYTPSMLRVPCLQNHI-------NIDVLYLDNTNCDPTRALPSRQQATQQIKQIIRDHPG 175
Query: 173 -------------------------WVWP--ERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV ERL+T+ +L D+FTT + R+R V +
Sbjct: 176 YAVVIGLYSLGKESLLVDLAMEFKTWVEVDRERLETLRVLQLPDVFTTDSGAGRIRVVNQ 235
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
S L + N + TI I+P+ P V
Sbjct: 236 SMISASNLMAWNKLQSTIAILPTSRPMV-------------------------------- 263
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGR 325
H +Y VPYSDHS + E+E+F++ + P ++ IV + L YF
Sbjct: 264 ---------SCHPNVYVVPYSDHSSYQELEDFVSALSPISLVPIVGNC------LPYFSS 308
Query: 326 LCRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRR 369
L + P + V+ + + N+ S + + R R
Sbjct: 309 LLSPRKKPKAVVIPESVKQYMMTNS----NIRSSTNGMIQRTSR 348
>gi|395842195|ref|XP_003793904.1| PREDICTED: 5' exonuclease Apollo [Otolemur garnettii]
Length = 530
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 157/352 (44%), Gaps = 101/352 (28%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FLTH+HSDHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGAARLFFLTHMHSDHTVGLSSTWAR-PLYCSPITAHLL-RRHLQVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G +T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DDIGRETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEAS--NERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI------- 172
R+ S NE A + R +D LYLDNT CN PSR+ AA QI
Sbjct: 122 RYTPSMLNEPALMFRKQ---------IDTLYLDNTNCNPDMVLPSRQEAAHQIVQLIQKH 172
Query: 173 ---------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAV 203
WV P+RL+ + LLG D+FT + R+ V
Sbjct: 173 PQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLGLADVFTVEEKAGRIHVV 232
Query: 204 PRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQT 263
T+ N HPTI I+P+ K S PG
Sbjct: 233 DHTEICHSTMLHWNQTHPTIAILPTS-------RKIHSSHPG------------------ 267
Query: 264 EKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
I+ +PYSDHS F+E+ F+ ++P + IVS C
Sbjct: 268 ----------------IHIIPYSDHSSFSELRAFVAALKPCQVVPIVSQRPC 303
>gi|116267959|ref|NP_001070751.1| 5' exonuclease Apollo [Danio rerio]
gi|115528190|gb|AAI24810.1| Zgc:154089 [Danio rerio]
Length = 571
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 177/404 (43%), Gaps = 106/404 (26%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W +++FL+H+HSDHT GLSS W+ P++CS LTAKL LK +
Sbjct: 11 IAVDCWQLRKCLHVRLFFLSHMHSDHTCGLSSTWSHRPIYCSPLTAKLLRLKL-QIKQKW 69
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L+IG H + + K + V IDANHCPG +VM LF+G FG LYTGDF
Sbjct: 70 IRPLEIGQDHMLML---DDLGKERLTVNLIDANHCPG----AVMFLFQGYFGTRLYTGDF 122
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S R +N + +D+LYLDNT C+ + A PSR+ A Q I
Sbjct: 123 RYTPSMLRVPCLQNHI-------NIDVLYLDNTNCDPTRALPSRQQATQLIKQIIRDHPG 175
Query: 173 -------------------------WVWP--ERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV ERL+T+ +L D+FTT + R+R V +
Sbjct: 176 YAVVIGLYSLGKESLLVDLAMEFKTWVEVDRERLETLRVLQLPDVFTTDSGAGRIRVVNQ 235
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ L + N + TI I+P+ P V
Sbjct: 236 SMINASNLMAWNKLQSTIAILPTSRPMV-------------------------------- 263
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGR 325
H +Y VPYSDHS + E+E+F++ + P ++ IV + L YF
Sbjct: 264 ---------SCHPNVYVVPYSDHSSYQELEDFVSALSPISLVPIVGNC------LPYFSS 308
Query: 326 LCRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRR 369
L + P + V+ + + N++S + + R R
Sbjct: 309 LLSPRRKPKAVVIPESVKQYMMTNS----NIQSSANGMIQRTSR 348
>gi|449490487|ref|XP_004176715.1| PREDICTED: LOW QUALITY PROTEIN: 5' exonuclease Apollo [Taeniopygia
guttata]
Length = 423
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 157/351 (44%), Gaps = 106/351 (30%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ G++++FL+H+HSDHT GLSS W R PL+CS +TA+L + + +
Sbjct: 11 IAVDFWSLRRAAGARLFFLSHMHSDHTVGLSSTWHR-PLYCSPITARLLHHRL-QVPMCW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + GE V V ID+NHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRPLEVGQSHVV-------GE---VTVTLIDSNHCPG----SVMFLFEGTFGTILYTGDF 114
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ---------- 171
R+ ++ + AL+ +D LYLDNT+C A PSR +A +Q
Sbjct: 115 RYTSAMQDE--------PALRGRHIDRLYLDNTHCQPQRALPSRALATRQAAHLIRAHPQ 166
Query: 172 --------------------------IWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
+ V P RL+ M LLG D+FT + +RAV
Sbjct: 167 HHVVIGVYSLGKETLLVDLALEFSTWVVVSPWRLEQMRLLGLPDVFTAEEGTGXIRAVDV 226
Query: 206 YSFSIDTLESLNTMHPT-IGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTE 264
D L N HP + I+P+G P
Sbjct: 227 AEICWDALVXWNAQHPQPMAIIPTGRP--------------------------------- 253
Query: 265 KLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
V H I+ +PYSDHS F E+ EF+ ++P +I IV C
Sbjct: 254 --------VRFTHPNIHLIPYSDHSSFEELREFVKWLKPCSIIPIVKGEMC 296
>gi|348586607|ref|XP_003479060.1| PREDICTED: 5' exonuclease Apollo-like [Cavia porcellus]
Length = 533
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 182/426 (42%), Gaps = 118/426 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGAARIFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRQL-QVSKRW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IRVL++G H + + +G +T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRVLEVGESHVLPL--DETGRETMT-VTLMDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNER---AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI------ 172
R+ S + +G+ + LYLDNT CN + PSR+ AA QI
Sbjct: 122 RYTPSMLKYPALALGKQ----------IHTLYLDNTNCNPALVLPSRQEAAHQIIQLIRR 171
Query: 173 ----------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRA 202
WV P+RL+ + LLG D+FT + R+ A
Sbjct: 172 HPQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLGLADVFTVEEKAGRIHA 231
Query: 203 VPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQ 262
V + N HPTI I+P+
Sbjct: 232 VEHMEICRSAMLRWNQTHPTIAILPTS--------------------------------- 258
Query: 263 TEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCY------ 316
+ R H I+ +PYSDHS +TE+ F+ ++P + IVS C
Sbjct: 259 --------RQMHRSHPDIHIIPYSDHSSYTELCAFVAALKPCQVVPIVSRQPCQNYFQNS 310
Query: 317 VDPLYYFGRLCRANQ---------PPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRK 367
+ P+ + + Q P + EKR++ + + E+ ++ DR
Sbjct: 311 LSPMLSIPLIPDSVQQYMSTSPKKPAFLWLLEKRIRRPKIQGVVFESPQENAGKSQADRD 370
Query: 368 RRRTAE 373
++T +
Sbjct: 371 TKKTKK 376
>gi|410899533|ref|XP_003963251.1| PREDICTED: 5' exonuclease Apollo-like [Takifugu rubripes]
Length = 590
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 156/345 (45%), Gaps = 96/345 (27%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
++VD W ++++FL+H+HSDHTQGL+S W+ P++CS TA L L+ +
Sbjct: 13 LAVDFWYVRKCPETRLFFLSHMHSDHTQGLTSTWSHRPIYCSPTTATLLRLRL-KVKEQW 71
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I L++ + + + G++T V IDANHCPG SVM LF+G FG +LYTGDF
Sbjct: 72 IHPLELDEPYMLPL--DDIGKETMT-VTLIDANHCPG----SVMFLFQGYFGSILYTGDF 124
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S R R + +D+LYLDNT C+ + P+R+ A QQI
Sbjct: 125 RYTPSMLREPCLRTNI-------TIDVLYLDNTNCDPNRTIPTRQRATQQIKEIIRGHPT 177
Query: 173 -----------------------WVWPE----RLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
W E R++T+ LG ++FTT+ R+R V +
Sbjct: 178 HCVVIGLYALGKETLLVDLAMEFKTWIEVSEGRMETLKALGLPNVFTTEPGAGRIRVVEQ 237
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
NT PT+ I+P+ P V
Sbjct: 238 SEIRAARFHQWNTEEPTLAILPTSRPLV-------------------------------- 265
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
FH IY VPYSDHS + E+E+F++ +QP+ + IV
Sbjct: 266 ---------SFHPNIYVVPYSDHSSYQELEDFVSALQPTAVVPIV 301
>gi|149030435|gb|EDL85472.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_a [Rattus norvegicus]
Length = 541
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 156/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+H DHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L+IG H + + G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEIGESHVLPL--DEIGQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ A QQI
Sbjct: 122 RYTPSMLKEPA--LTLGKQ-----IHTLYLDNTNCNPALVLPSRQEATQQIIQLIRQFPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P+RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I P+ + K
Sbjct: 235 MEICHSAMLQWNQTHPTIAIFPT----------------------------------SRK 260
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
++ H IYS+PYSDHS ++E+ F+ ++P + IV C
Sbjct: 261 IRSP-------HPSIYSIPYSDHSSYSELRAFVAALRPCQVVPIVREQPC 303
>gi|348521498|ref|XP_003448263.1| PREDICTED: 5' exonuclease Apollo-like [Oreochromis niloticus]
Length = 586
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 155/345 (44%), Gaps = 96/345 (27%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
++VD W G++++FL+H+HSDHT GL+S W+ P++CS +TA L LK +
Sbjct: 13 LAVDFWHVRKCPGTRLFFLSHMHSDHTTGLTSTWSNRPIYCSPITATLLKLKL-QVKEQW 71
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I L++G + + + K + V IDANHCPG +VM LF G FG +LYTGDF
Sbjct: 72 IHPLEVGEPYLLPL---DDIGKERLTVTLIDANHCPG----AVMFLFEGYFGSILYTGDF 124
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S R R +D+LYLDNT C+ + PSR+ A QQI
Sbjct: 125 RYTPSMLREPCLRTYA-------TIDVLYLDNTNCDPNRTLPSRQRATQQIKEIIRSHPS 177
Query: 173 -------------------------WVWP--ERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV ER++T+ L D+FTT+ R+RAV +
Sbjct: 178 HNVIIGLYSLGKESLLLELAMEFKSWVEVSFERMETLKALELPDVFTTEPGAGRIRAVDQ 237
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
L N PT+ I+P+ P +
Sbjct: 238 SEICASALHQWNKEQPTLAILPTSRPLI-------------------------------- 265
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
FH ++ VPYSDHS + E+E+F++ ++P+ + IV
Sbjct: 266 ---------SFHPDVHVVPYSDHSSYQELEDFVSALKPTCLIPIV 301
>gi|26339774|dbj|BAC33550.1| unnamed protein product [Mus musculus]
Length = 541
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 157/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FLTH+H DHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRL-QVSKHW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEIGQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + L+ + + LYLDNT CN + PSR+ A+QQI
Sbjct: 122 RYTPSM----LKEPALILGKQ---IHTLYLDNTNCNPALVLPSRQEASQQIVQLIRQFPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P+RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I P+ + K
Sbjct: 235 TEICHSAMLQWNQSHPTIAIFPT----------------------------------SRK 260
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
++ H IY+VPYSDHS ++E+ F+ ++P + IV C
Sbjct: 261 VRSP-------HPSIYTVPYSDHSSYSELRAFVAALRPCQVVPIVHQKPC 303
>gi|148675641|gb|EDL07588.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_c [Mus musculus]
Length = 541
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 156/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FLTH+H DHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRL-QVSKHW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEIGQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + L+ + + LYLDNT CN + PSR+ A QQI
Sbjct: 122 RYTPSM----LKEPALILGKQ---IHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P+RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I P+ + K
Sbjct: 235 TEICHSAMLQWNQSHPTIAIFPT----------------------------------SRK 260
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
++ H IY+VPYSDHS ++E+ F+ ++P + IV C
Sbjct: 261 VRSP-------HPSIYTVPYSDHSSYSELRAFVAALRPCQVVPIVHQKPC 303
>gi|70778966|ref|NP_598626.2| 5' exonuclease Apollo isoform a [Mus musculus]
gi|73620758|sp|Q8C7W7.2|DCR1B_MOUSE RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
gi|74141057|dbj|BAE22098.1| unnamed protein product [Mus musculus]
gi|74152210|dbj|BAE32389.1| unnamed protein product [Mus musculus]
Length = 541
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 156/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FLTH+H DHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRL-QVSKHW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEIGQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + L+ + + LYLDNT CN + PSR+ A QQI
Sbjct: 122 RYTPSM----LKEPALILGKQ---IHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P+RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I P+ + K
Sbjct: 235 TEICHSAMLQWNQSHPTIAIFPT----------------------------------SRK 260
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
++ H IY+VPYSDHS ++E+ F+ ++P + IV C
Sbjct: 261 VRSP-------HPSIYTVPYSDHSSYSELRAFVAALRPCQVVPIVHQKPC 303
>gi|306755667|sp|Q4KLY6.2|DCR1B_RAT RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
Length = 541
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 156/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+H DHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L+IG H + + G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEIGESHVL--LLDEIGQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ A QQI
Sbjct: 122 RYTPSMLKEPA--LTLGKQ-----IHTLYLDNTNCNPALVLPSRQEATQQIIQLIRQFPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P+RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I P+ + K
Sbjct: 235 MEICHSAMLQWNQTHPTIAIFPT----------------------------------SRK 260
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
++ H IYS+PYSDHS ++E+ F+ ++P + IV C
Sbjct: 261 IRSP-------HPSIYSIPYSDHSSYSELRAFVAALRPCQVVPIVREQPC 303
>gi|74216024|dbj|BAE23700.1| unnamed protein product [Mus musculus]
Length = 541
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 156/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FLTH+H DHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRL-QVSKHW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEIGQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + L+ + + LYLDNT CN + PSR+ A QQI
Sbjct: 122 RYTPSM----LKEPALILGKQ---IHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P+RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I P+ + K
Sbjct: 235 TEICHSAMLQWNQSHPTIAIFPT----------------------------------SRK 260
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
++ H IY+VPYSDHS ++E+ F+ ++P + IV C
Sbjct: 261 VRSP-------HPSIYTVPYSDHSSYSELRAFVAALRPCQVVPIVHQKPC 303
>gi|73981038|ref|XP_848274.1| PREDICTED: 5' exonuclease Apollo [Canis lupus familiaris]
Length = 530
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 158/350 (45%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLVHRQL-QVSKRW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G +T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEIGRETMT-VTLMDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + + +K K + LYLDNT CN + PSR+ AA+QI
Sbjct: 122 RYTPS-----MLKEPALKLGKQ--IHTLYLDNTNCNPARVLPSRQEAARQIVELIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P+RL+ + LLG ++FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLANVFTVEEKAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 MEICRAAVLHWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ R H I+ +PYSDHS F+E++ F+ ++P + IVS C
Sbjct: 259 -----RKIHRSHPDIHIIPYSDHSSFSELQTFVAALKPCQVVPIVSQQPC 303
>gi|306755662|sp|D2H8V8.1|DCR1B_AILME RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
gi|281339477|gb|EFB15061.1| hypothetical protein PANDA_006715 [Ailuropoda melanoleuca]
Length = 529
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 158/352 (44%), Gaps = 101/352 (28%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF--PLKFPGLDL 59
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L L+ P
Sbjct: 11 IAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHLQVPK--- 66
Query: 60 SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTG 119
IR L++G H + + G +T V +DANHCPG SVM LF G FG +LYTG
Sbjct: 67 EWIRALEVGESHVLPL--DEIGRETMT-VTLMDANHCPG----SVMFLFEGYFGTILYTG 119
Query: 120 DFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI------- 172
DFR+ S + + +K K + LYLDNT CN ++ PSR+ AA+QI
Sbjct: 120 DFRYTPS-----MLKEPALKLGKQ--IHTLYLDNTNCNPAWVLPSRQEAARQIVELIRKH 172
Query: 173 ---------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAV 203
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 173 PQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTLEEKAGRIHAV 232
Query: 204 PRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQT 263
+ N HPTI I+P+
Sbjct: 233 DHMEICHSAMLHWNQTHPTIAILPTS---------------------------------- 258
Query: 264 EKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ R H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 259 -------RKIHRSHPDIHIIPYSDHSSYSELRTFVAALKPCQVVPIVSRQPC 303
>gi|355682949|gb|AER97012.1| DNA cross-link repair 1B [Mustela putorius furo]
Length = 538
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 161/352 (45%), Gaps = 101/352 (28%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF--PLKFPGLDL 59
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L L+ P
Sbjct: 11 IAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHLQVPK--- 66
Query: 60 SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTG 119
IR L++G H + + G +T V IDANHCPG SVM LF G FG +LYTG
Sbjct: 67 EWIRALEVGESHVLPL--DEIGRETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTG 119
Query: 120 DFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI------- 172
DFR+ S + + +K K + LYLDNT CN ++ PSR+ AA+QI
Sbjct: 120 DFRYTPS-----MLKEPALKLGKQ--IHTLYLDNTNCNPAWILPSRQEAARQIVELIRKH 172
Query: 173 ---------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAV 203
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 173 PQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAV 232
Query: 204 PRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQT 263
+ N HPTI I+P+ +
Sbjct: 233 DHMEVCHSAMLHWNQTHPTIAILPT----------------------------------S 258
Query: 264 EKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
K++ + H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 259 RKIRHS-------HPDIHVIPYSDHSSYSELRTFVAALKPGRVVPIVSQQPC 303
>gi|301765736|ref|XP_002918298.1| PREDICTED: DNA cross-link repair 1B protein-like [Ailuropoda
melanoleuca]
Length = 543
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 158/352 (44%), Gaps = 101/352 (28%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF--PLKFPGLDL 59
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L L+ P
Sbjct: 11 IAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHLQVPK--- 66
Query: 60 SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTG 119
IR L++G H + + G +T V +DANHCPG SVM LF G FG +LYTG
Sbjct: 67 EWIRALEVGESHVLPL--DEIGRETMT-VTLMDANHCPG----SVMFLFEGYFGTILYTG 119
Query: 120 DFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI------- 172
DFR+ S + + +K K + LYLDNT CN ++ PSR+ AA+QI
Sbjct: 120 DFRYTPS-----MLKEPALKLGKQ--IHTLYLDNTNCNPAWVLPSRQEAARQIVELIRKH 172
Query: 173 ---------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAV 203
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 173 PQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTLEEKAGRIHAV 232
Query: 204 PRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQT 263
+ N HPTI I+P+
Sbjct: 233 DHMEICHSAMLHWNQTHPTIAILPTS---------------------------------- 258
Query: 264 EKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ R H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 259 -------RKIHRSHPDIHIIPYSDHSSYSELRTFVAALKPCQVVPIVSRQPC 303
>gi|71043610|ref|NP_001020858.1| 5' exonuclease Apollo [Rattus norvegicus]
gi|68534320|gb|AAH98939.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) [Rattus
norvegicus]
Length = 309
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 156/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+H DHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L+IG H + + G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEIGESHVL--LLDEIGQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ A QQI
Sbjct: 122 RYTPSMLKEP--ALTLGKQ-----IHTLYLDNTNCNPALVLPSRQEATQQIIQLIRQFPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P+RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I P+ + K
Sbjct: 235 MEICHSAMLQWNQTHPTIAIFPT----------------------------------SRK 260
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
++ H IYS+PYSDHS ++E+ F+ ++P + IV C
Sbjct: 261 IRSP-------HPSIYSIPYSDHSSYSELRAFVAALRPCQVVPIVREQPC 303
>gi|320168671|gb|EFW45570.1| DNA cross-link repair protein 1B [Capsaspora owczarzaki ATCC 30864]
Length = 729
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 193/438 (44%), Gaps = 115/438 (26%)
Query: 6 ISVDRW--TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIR 63
I++D W +++FL+HLH+DHTQGLS +W +G ++CS +T L KF G+D SL+
Sbjct: 11 IALDCWRPPPAIKIFFLSHLHADHTQGLSPSWRQGTIYCSPVTRLLLLHKF-GVDASLVE 69
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
L++ ++ + P E + V A DANHCPG +VM L G FG +LYTGDFR+
Sbjct: 70 TLELDE-PTVVPLDPEGAET--MTVTAFDANHCPG----AVMFLLEGYFGNVLYTGDFRF 122
Query: 124 EASNERAEIGRNTLVKAL--------KDDVVDILYLDNTYCNSSYAFPSREVAAQ----- 170
+ E ++L+ A + VD+LYLDNTYC+ +AFP+RE
Sbjct: 123 CPALIHPE---DSLLGARLAGGAHGGRRLNVDVLYLDNTYCDPKFAFPTREAGVDAVVDI 179
Query: 171 -----------------------------QIW--VWPERLQTMHLLGFHDIFTTKTSLTR 199
Q W V RL + L+G D+FT+ + +R
Sbjct: 180 IEQHPDHRVMIGIDTLGKEELLEAVALRLQTWIVVSQSRLNALQLIGARDVFTSNPTDSR 239
Query: 200 VRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG 259
+ V + + + L + N +PTI I+PSG PL G G L ++ Q+ R +G
Sbjct: 240 IWVVGKREVTAERLFAWNREYPTIAILPSG--QCQNPLYNGT---GRLGAAGQNLDRGSG 294
Query: 260 GT-QTEKLKEALGSVD-----RFH------------------------------------ 277
G QT + + + D R H
Sbjct: 295 GAVQTPSAQLPVRASDANFEERMHWRVPGAAVDSTGGGSGAEAGAEHDSERRLRDYQRQE 354
Query: 278 ---KYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLCRANQPPL 334
++++V YS HS F E+ F+ V+P +I IV Y D +FG L R
Sbjct: 355 FVQSHLFTVAYSLHSSFAEMAAFVRAVKPRDILPIV--PELYADLRQHFGGLLR------ 406
Query: 335 RYKQEKRVQHKTVVAAQI 352
R Q +TVV A +
Sbjct: 407 RIDPAVGAQPRTVVPASV 424
>gi|260809984|ref|XP_002599784.1| hypothetical protein BRAFLDRAFT_166573 [Branchiostoma floridae]
gi|229285066|gb|EEN55796.1| hypothetical protein BRAFLDRAFT_166573 [Branchiostoma floridae]
Length = 319
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 162/349 (46%), Gaps = 91/349 (26%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
+VD W ++ ++++FLTH+H+DHT GLS +W + P++CS +TAKL KF + +L
Sbjct: 11 FAVDFWKSRQSDHTRLFFLTHMHADHTSGLSPSW-KHPIYCSEITAKLLIHKF-DIAPAL 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
+ L++G + + +G++T V DANHCPG +VM LF+G FG + YTGDF
Sbjct: 69 VHTLEVGESRMLPL--DETGQETMT-VTVFDANHCPG----AVMFLFQGYFGSIFYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ----------- 170
R+ E+ N +D+LYLDNTYC+ FPSR A Q
Sbjct: 122 RYSPEMFDHEVLANR-------PSIDVLYLDNTYCSPECKFPSRAQATQMIKDIISRHPE 174
Query: 171 -----------------------QIW--VWPERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
Q W V P+RL+T+ LL ++FTT R+R +
Sbjct: 175 HDIVLGMTMLGKEDMLVELAKTFQTWVVVTPQRLETLKLLELPNVFTTDPEAGRIRVALK 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
Y + +E N PTI I+PS +L++ K A
Sbjct: 235 YQITRKNMERWNQERPTIAILPS-----------------ALYTGLDGKPYAN------- 270
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
++ VPYSDHS E+ +F++ ++P +I +V +S
Sbjct: 271 -----------QPDVHIVPYSDHSSNGELHDFVSRLKPRSIIPVVKGTS 308
>gi|351697379|gb|EHB00298.1| DNA cross-link repair 1B protein [Heterocephalus glaber]
Length = 533
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 179/421 (42%), Gaps = 112/421 (26%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRARAARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+VL++G H + + G +T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IQVLEVGESHVLPL--DEIGRETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ AA QI
Sbjct: 122 RYTPSMLKEPAL--TLGKQ-----IHTLYLDNTNCNPALVLPSRQEAAHQIIQLIRRHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV +RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFRTWVVLSHQRLELVQLLGLADVFTVEEKAGRIHAVEH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI ++P+
Sbjct: 235 MEICRSAMLHWNQTHPTIAVLPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC------YVDP 319
+ R H I+ +PYSDHS ++E+ F+ ++P + IVS C + P
Sbjct: 259 -----RKIHRSHPDIHIIPYSDHSSYSELCAFVAALKPCQVVPIVSRQPCGNYFQDSLSP 313
Query: 320 LYYFGRL---------CRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRRR 370
+ + +N+P + +KR++ + + E+ ++ DR ++
Sbjct: 314 MLSMPLIPDSVQQYMSSSSNKPEFLWLLKKRLKRPRIQGVVFESPQENADKSQADRDSKK 373
Query: 371 T 371
T
Sbjct: 374 T 374
>gi|291220934|ref|XP_002730478.1| PREDICTED: DNA cross-link repair 1B (PSO2 homolog, S.
cerevisiae)-like [Saccoglossus kowalevskii]
Length = 939
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 164/350 (46%), Gaps = 93/350 (26%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W ++++FLTH+H+DHT GLS +W + ++CS ++AKL KF + SL
Sbjct: 11 IAVDYWRTRNCPETKLFFLTHMHADHTSGLSPSW-KSTIYCSPVSAKLLRAKFE-IQQSL 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+ L++G H I + G +T V IDANHCPG SV+ LF G FG +LYTGDF
Sbjct: 69 IQSLEVGVGHVIPL--DEYGHETMT-VTPIDANHCPG----SVIYLFVGYFGTVLYTGDF 121
Query: 122 RWEASNERAEIGRN-TLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI-------- 172
R+ +++ N L K L VD+LYLDNTY N + FPSRE +I
Sbjct: 122 RY-----TSDMFLNPPLCKHL---CVDVLYLDNTYNNPNCLFPSREECTAKIIEIIQSHP 173
Query: 173 --------------------------W--VWPERLQTMHLLGFHDIFTTKTSLTRVRAVP 204
W V P R T+ L ++FTT+T R+ V
Sbjct: 174 QHDVKLGMHTLGKENLLVDIARAVQEWIVVSPSRYSTLEQLKMPNVFTTETDAGRIHLVS 233
Query: 205 RYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTE 264
Y + ++ N PTIGI+P+ L SL G +SS
Sbjct: 234 SYQITKKIMKKWNDKRPTIGILPTAL---------YTSLNGQPYSS-------------- 270
Query: 265 KLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
K ++ VPYSDHS + E+ +F++ V+P I IV S
Sbjct: 271 ------------QKDVFVVPYSDHSSYYELFKFVSQVRPKTIIPIVKQKS 308
>gi|344275329|ref|XP_003409465.1| PREDICTED: 5' exonuclease Apollo [Loxodonta africana]
Length = 544
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 156/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS ++A L + +
Sbjct: 11 IAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPVSAHLLHRRL-QVPKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEIGQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + R L K V LYLDNT CN + PS++ A +QI
Sbjct: 122 RYIPSMLKEPALR--LGKQ-----VHTLYLDNTNCNPALILPSQQEATRQIIELIRKYPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV R
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFRTWVVLSPRRLELVQLLGLADVFTVDENAGRIHAVDR 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
T+ N HPTI I+P+
Sbjct: 235 TEICRSTMLHWNRTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 259 -----RKIHISHPDIHIIPYSDHSSYSELRAFVAALKPCQVVPIVSGQPC 303
>gi|149411559|ref|XP_001506464.1| PREDICTED: 5' exonuclease Apollo-like [Ornithorhynchus anatinus]
Length = 563
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 157/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS W R PL+CS LT +L +
Sbjct: 11 IAVDFWSLRRAGPARLFFLSHMHSDHTVGLSSTWTR-PLYCSPLTGRLLHHSL-QVAERW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRTLEVGESHVLPLD--EMGQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ + R + + + LYLDNT CN ++ PSRE A +QI
Sbjct: 122 RYAPAMLREPVLSH-------GKQIHTLYLDNTNCNPAHPLPSREEATRQIAALIRRHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P+RL+ + LL D+FT + R+ AV
Sbjct: 175 HDVKIGLYSLGKETLLEELALEFGTWVVLSPQRLELVRLLDLADVFTVEEGAGRIHAVNH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
T+ N+ PTI I+P+ S+W T
Sbjct: 235 AEICRATMLRWNSDRPTIAILPT------------------------SRWVQTA------ 264
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
H I+ VPYSDHS F+E+ +F+ ++P ++ IV C
Sbjct: 265 -----------HPDIHVVPYSDHSSFSELWDFVVALRPCSVVPIVKGQPC 303
>gi|426330866|ref|XP_004026426.1| PREDICTED: 5' exonuclease Apollo [Gorilla gorilla gorilla]
Length = 532
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 153/350 (43%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ S+++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGTSRLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+ L++G H + + G++T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IQALEVGESHVLPL--DEIGQETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ AA QI
Sbjct: 122 RYTPSMLKEPA--LTLGKQ-----IHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 MEICHSNMLRWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 259 -----RKIHSSHPDIHVIPYSDHSSYSELRAFVAALKPCQVVPIVSRRPC 303
>gi|291398227|ref|XP_002715463.1| PREDICTED: DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae)
[Oryctolagus cuniculus]
Length = 538
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 157/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRQR-QVSKKW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G++T V +DA+HCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEIGQETMT-VTLLDAHHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + R + + K + LYLDNT CN + P+R+ AA QI
Sbjct: 122 RYTPS-----MLREPPLSSGKQ--IHTLYLDNTNCNPALVLPTRQEAAHQIVQLIREHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P+RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEHLALECQTWVVLSPQRLEVVQLLGLADVFTVEEKAGRIHAVDN 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 MEICHSAMLRWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ H I+ +PYSDHS ++E+ F++ ++PS + IV C
Sbjct: 259 -----RKIHTSHPDIHIIPYSDHSSYSELRTFVSALKPSQVVPIVRRQPC 303
>gi|395535693|ref|XP_003769856.1| PREDICTED: 5' exonuclease Apollo [Sarcophilus harrisii]
Length = 534
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 177/417 (42%), Gaps = 114/417 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W ++++FLTHLH+DHT+GLSS WAR PL+CS LTA+L + +
Sbjct: 11 IAVDLWNLRRASSARLFFLTHLHADHTEGLSSTWAR-PLYCSPLTARLVRCRL-QVSPKW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G +T V V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEMGHET-VTVTLMDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + R + LYLDNT C+ + PSR+ A +QI
Sbjct: 122 RYSPSMLQEPALR-------PGKQIHTLYLDNTNCDPALVLPSRQEATRQITDLIRRHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
W+ P R++ + L+ D+FT + R+ AV
Sbjct: 175 HDVKIGLYNLGKESLLEQLGLEFQTWIVLSPRRMEVVQLMELADVFTLEEGAGRIHAVNC 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N +HPTI I+P+
Sbjct: 235 AEICWSAMLQWNQIHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFG- 324
+ H I+ VPYSDHS F+E+ +F++ ++P I IV C +YF
Sbjct: 259 -----RRISFSHPGIHVVPYSDHSSFSELCDFVSALKPCRIVPIVQGRPCQ----HYFQE 309
Query: 325 ----RLCRANQPPLRYKQEKRVQHKTVVAAQIKFNVESGRSAKVDRKRRRTAEVGVL 377
+L Q PL +Q T A GR ++R+ +R GV+
Sbjct: 310 SLSPQLLLEPQVPLSVQQYMGTSWNTPKAW--------GRVCLLEREPKRPKTQGVV 358
>gi|354487402|ref|XP_003505862.1| PREDICTED: 5' exonuclease Apollo-like [Cricetulus griseus]
gi|344252631|gb|EGW08735.1| DNA cross-link repair 1B protein [Cricetulus griseus]
Length = 527
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 156/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRRL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + +G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DETGQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + L+ + + LYLDNT CN + PSR+ A QQI
Sbjct: 122 RYTPSM----LKEPALILGKQ---IHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P+RL+ + LLG D+FT + + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLADVFTVEEKVGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+ V P G ++P
Sbjct: 235 MEICHSAMLQWNQTHPTIAILPTSRK-VRSPHPGIHTIP--------------------- 272
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
YSDHS ++E+ F+ ++P + IV C
Sbjct: 273 -------------------YSDHSSYSELRAFVAALKPCRVVPIVRQQPC 303
>gi|126311625|ref|XP_001382039.1| PREDICTED: 5' exonuclease Apollo-like [Monodelphis domestica]
Length = 567
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 156/353 (44%), Gaps = 103/353 (29%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W ++++FLTHLH+DHT+GLSS WAR PL+CS L+A+L + +
Sbjct: 11 IAVDLWNLRRAGSARLFFLTHLHADHTEGLSSTWAR-PLYCSPLSARLVHRRL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G++T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEIGQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEAS--NERA-EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI------ 172
R+ S E A +G+ + LYLDNT C+ S PSR+ A QI
Sbjct: 122 RYTPSMLQEPALRLGKQ----------IHTLYLDNTNCDPSLVLPSRQEATHQITELIRQ 171
Query: 173 ----------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRA 202
WV P+R++ + L+ +FT + R+ A
Sbjct: 172 HPQHDVKIGLYSLGKESLLEQLGLEFQTWVVLSPQRMEVVQLMELASVFTVEEGAGRIHA 231
Query: 203 VPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQ 262
V R S + N HPTI I+P+
Sbjct: 232 VNRAEVSWSAMLQWNRTHPTIAILPTS--------------------------------- 258
Query: 263 TEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ H I+ +PYSDHS F+E+ +F+ ++P I IV C
Sbjct: 259 --------RRIHISHPGIHVIPYSDHSSFSELCDFVAALRPCRIVPIVQGVPC 303
>gi|440913218|gb|ELR62698.1| 5' exonuclease Apollo, partial [Bos grunniens mutus]
Length = 528
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 149/350 (42%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FLTH+HSDHT GL+S W R PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGSARLFFLTHMHSDHTVGLTSTWTR-PLYCSPITAYLLHRHL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G +T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEVGRETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + R + LYLDNT CN PS+E AA+QI
Sbjct: 122 RYTPSMLKEPALR-------PGKQIHTLYLDNTNCNPDLVLPSQEEAARQIVELIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLERLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 MEICHSAMLRWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ R H I+ +PYSDHS ++E+ F+ ++P + IV C
Sbjct: 259 -----RKIYRSHPNIHVIPYSDHSSYSELRVFVAALKPCQVVPIVRRQPC 303
>gi|55587856|ref|XP_524804.1| PREDICTED: 5' exonuclease Apollo [Pan troglodytes]
gi|397468053|ref|XP_003805712.1| PREDICTED: 5' exonuclease Apollo [Pan paniscus]
gi|410216116|gb|JAA05277.1| DNA cross-link repair 1B [Pan troglodytes]
gi|410256044|gb|JAA15989.1| DNA cross-link repair 1B [Pan troglodytes]
gi|410289690|gb|JAA23445.1| DNA cross-link repair 1B [Pan troglodytes]
gi|410330025|gb|JAA33959.1| DNA cross-link repair 1B [Pan troglodytes]
Length = 532
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 153/350 (43%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+ L++G H + + G++T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IQALEVGESHVLPL--DEIGQETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ AA QI
Sbjct: 122 RYTPSMLKEPA--LTLGKQ-----IHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 MEICHSNMLRWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 259 -----RKIHSSHPDIHVIPYSDHSSYSELRAFVAALKPCQVVPIVSRRPC 303
>gi|332237717|ref|XP_003268053.1| PREDICTED: 5' exonuclease Apollo [Nomascus leucogenys]
Length = 531
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 153/350 (43%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+ L++G H + + G++T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IQALEVGESHVLPL--DEIGQETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ AA QI
Sbjct: 122 RYTPSMLKEPA--LTLGKQ-----IHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 MEICHSNMLRWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 259 -----RKIHSSHPDIHVIPYSDHSSYSELRAFVAALKPCQVVPIVSRRPC 303
>gi|12383082|ref|NP_073747.1| 5' exonuclease Apollo [Homo sapiens]
gi|73620756|sp|Q9H816.1|DCR1B_HUMAN RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B;
Short=SNMIB; Short=hSNM1B
gi|10436338|dbj|BAB14807.1| unnamed protein product [Homo sapiens]
gi|20987357|gb|AAH29687.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Homo
sapiens]
gi|56553109|gb|AAV97812.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Homo
sapiens]
gi|119576986|gb|EAW56582.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae), isoform
CRA_a [Homo sapiens]
gi|325463825|gb|ADZ15683.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [synthetic
construct]
Length = 532
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 153/350 (43%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+ L++G H + + G++T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IQALEVGESHVLPL--DEIGQETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ AA QI
Sbjct: 122 RYTPSMLKEPA--LTLGKQ-----IHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 MEICHSNMLRWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 259 -----RKIHSSHPDIHVIPYSDHSSYSELRAFVAALKPCQVVPIVSRRPC 303
>gi|410968088|ref|XP_003990545.1| PREDICTED: 5' exonuclease Apollo [Felis catus]
Length = 541
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 155/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHL-QVSKKW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G +T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEIGRETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + + +K K + LYLDNT CN + PSR+ AA+QI
Sbjct: 122 RYTPS-----MLKEPALKLGKQ--IHTLYLDNTNCNPARVLPSRQEAARQIIELIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+ R T +
Sbjct: 235 MEVCRSAMLHWNQTHPTIAILPTS--------------------------RKTHSS---- 264
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
H I+ +PYSDHS ++E+ F+ ++P + IV C
Sbjct: 265 -----------HPDIHIIPYSDHSSYSELRAFVAALKPCQVVPIVHRQPC 303
>gi|297472828|ref|XP_002686220.1| PREDICTED: 5' exonuclease Apollo [Bos taurus]
gi|358411414|ref|XP_589521.5| PREDICTED: 5' exonuclease Apollo [Bos taurus]
gi|296489426|tpg|DAA31539.1| TPA: DNA cross-link repair 1B [Bos taurus]
Length = 542
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 151/350 (43%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FLTH+HSDHT GL+S W R PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGSARLFFLTHMHSDHTVGLTSTWTR-PLYCSPITAYLLHRHL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G +T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEVGRETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + R L K + LYLDNT CN PS+E AA+QI
Sbjct: 122 RYTPSMLKEPALR--LGKQ-----IHTLYLDNTNCNPDLVLPSQEEAARQIVELIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLERLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 MEICHSAMLRWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ R H I+ +PYSDHS ++E+ F+ ++P + IV C
Sbjct: 259 -----RKIYRSHPNIHVIPYSDHSSYSELRVFVAALKPCQVVPIVRRQPC 303
>gi|442570460|pdb|3ZDK|A Chain A, Crystal Structure Of Human 5' Exonuclease Apollo
Length = 336
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 156/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 12 IAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL-QVSKQW 69
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+ L++G H + + G++T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 70 IQALEVGESHVLPL--DEIGQETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 122
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ AA QI
Sbjct: 123 RYTPSMLKEP--ALTLGKQ-----IHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQ 175
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 176 HNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDH 235
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+ + K
Sbjct: 236 MEICHSNMLRWNQTHPTIAILPT----------------------------------SRK 261
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ + H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 262 IHSS-------HPDIHVIPYSDHSSYSELRAFVAALKPCQVVPIVSRRPC 304
>gi|431896514|gb|ELK05926.1| DNA cross-link repair 1B protein [Pteropus alecto]
Length = 488
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 151/345 (43%), Gaps = 97/345 (28%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FLTH+HSDHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAASARLFFLTHMHSDHTVGLSSTWAR-PLYCSPITAFLLHRQL-QVSKKW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + +G++T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DETGQETMT-VTLMDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + R + LYLDNT N PS+E AA+QI
Sbjct: 122 RYTPSMLKEPALRG-------GKQIHTLYLDNTNYNPELVLPSQEEAARQIVELIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV R
Sbjct: 175 HNVKIGLYSLGKESLLEQLALEFRTWVVLSPRRLELVQLLGLADVFTVEEQAGRIHAVDR 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 VEICHSAMLRWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
+ H I+ VPYSDHS ++E+ F+ ++P + IV
Sbjct: 259 -----RKIHSSHPDIHVVPYSDHSSYSELCAFVTALKPCRVVPIV 298
>gi|444724691|gb|ELW65290.1| 5' exonuclease Apollo [Tupaia chinensis]
Length = 545
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 155/350 (44%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FLTH+HSDHT GLSS WAR PL+CS +TA + + +
Sbjct: 11 IAVDFWSLRRAGTARLFFLTHMHSDHTVGLSSTWAR-PLYCSPITAHILHRRL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G +T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEIGRETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ AA +I
Sbjct: 122 RFTPSMLKEPAL--TLGKQ-----IHTLYLDNTNCNPALDLPSRQEAAHEIVQLIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HIIKIGLYSLGKESLLEQLALEFRTWVVLSPRRLELVQLLGLADVFTAEEKAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+ K S PG
Sbjct: 235 MEICHSRMVHWNRTHPTIAILPTS-------RKIHISHPG-------------------- 267
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
++ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 268 --------------VHVIPYSDHSTYSELRAFVAALRPCQVVPIVSRQPC 303
>gi|297664011|ref|XP_002810450.1| PREDICTED: 5' exonuclease Apollo [Pongo abelii]
Length = 532
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 153/350 (43%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+ L++G H + + G++T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IQALEVGESHVLPL--DEIGQETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ AA QI
Sbjct: 122 RYTPSMLKEPA--LTLGKQ-----IHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 MEICHSNMLRWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 259 -----RKIHSSHPDIHVIPYSDHSSYSELCAFVAALKPCQVVPIVSRRPC 303
>gi|311254550|ref|XP_003125885.1| PREDICTED: 5' exonuclease Apollo-like [Sus scrofa]
Length = 537
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 155/353 (43%), Gaps = 103/353 (29%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS W R P++CS +TA L +
Sbjct: 11 IAVDFWSLRRAGCARLFFLSHMHSDHTVGLSSTWCR-PVYCSPITAYLLHRHL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G +T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHILPL--DEVGRETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEAS--NERA-EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI------ 172
R+ S E A ++G+ + LYLDNT CN + PS++ AA+QI
Sbjct: 122 RFTPSMLKEPALQLGKP----------IHTLYLDNTNCNPALVLPSQQEAARQIVELIRK 171
Query: 173 ----------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRA 202
WV P RL+ + LLG D+FT + R+ A
Sbjct: 172 HPQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHA 231
Query: 203 VPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQ 262
V + N HPTI I+P+
Sbjct: 232 VDHMEICRSAVLRWNQTHPTIAILPTS--------------------------------- 258
Query: 263 TEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ R H I+ +PYSDHS F+E+ F+ ++P + IVS C
Sbjct: 259 --------RRIYRSHPDIHIIPYSDHSSFSELRAFVAALRPCQVVPIVSRQPC 303
>gi|326428581|gb|EGD74151.1| DNA cross-link repair 1B protein [Salpingoeca sp. ATCC 50818]
Length = 1328
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 165/371 (44%), Gaps = 88/371 (23%)
Query: 6 ISVDRWTE--GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIR 63
I+VD W + G ++YFLTH H+DH GL S+W G +FCS ++ L K+ +D LI
Sbjct: 13 IAVDTWRQAPGVRLYFLTHAHADHCNGLISSWRAGRIFCSEISKALIIHKY-NIDADLIT 71
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
L++G H I + SG+ T V IDANHCPG +VM LF+G FG +L TGDFR+
Sbjct: 72 ALEVGEKHLIPL--DDSGKHTMY-VTLIDANHCPG----AVMFLFQGYFGTVLCTGDFRY 124
Query: 124 EASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ------------ 171
L+ VD LYLDNTYCN PS+E+A Q
Sbjct: 125 TPQQ----------TSVLEGVSVDHLYLDNTYCNPRCRHPSQEMAKMQLFRLIDDHPDYD 174
Query: 172 ------------------------IWVWPERLQTMHLLGFH-DIFTTKTSLTRVRAVPRY 206
I V +L T + G FTT+ +R VPR+
Sbjct: 175 ILLGVDTLGKEDVLLDVASKYSAAIHVSEPQLATYRVAGIPCSAFTTQPEDSRFHVVPRH 234
Query: 207 SFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKL 266
+ +E + + P +G++ L + S + +Q +
Sbjct: 235 QLTKAYVEGYD-IQPALGVV--------------------LTAYNPSAFSTVDPSQHHSV 273
Query: 267 KEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRL 326
K + R H+ VPYS HS F E++ F+ + P I IV ++S VDPL +F L
Sbjct: 274 K----ATTRLHR----VPYSLHSNFDELQLFVRTIGPKTIVPIVRAAS--VDPLPHFRDL 323
Query: 327 CRANQPPLRYK 337
N PP Y+
Sbjct: 324 LPDNNPPSLYQ 334
>gi|109014448|ref|XP_001110949.1| PREDICTED: DNA cross-link repair 1B protein [Macaca mulatta]
gi|355558293|gb|EHH15073.1| hypothetical protein EGK_01115 [Macaca mulatta]
Length = 532
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 152/350 (43%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+ L+IG H + + G +T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IQPLEIGESHVLPL--DEIGRETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ AA QI
Sbjct: 122 RYTPSMLKEPA--LTLGKQ-----IHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYNLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVGH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 MEICHSNMLRWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 259 -----RKIHSSHPDIHVIPYSDHSSYSELCAFVAALKPCQVVPIVSRQPC 303
>gi|355745555|gb|EHH50180.1| hypothetical protein EGM_00966 [Macaca fascicularis]
gi|380815684|gb|AFE79716.1| 5' exonuclease Apollo [Macaca mulatta]
gi|383414005|gb|AFH30216.1| 5' exonuclease Apollo [Macaca mulatta]
Length = 532
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 152/350 (43%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+ L+IG H + + G +T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IQPLEIGESHVLPL--DEIGRETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ AA QI
Sbjct: 122 RYTPSMLKEPA--LTLGKQ-----IHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYNLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVGH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 MEICHSNMLRWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 259 -----RKIHSSHPDIHVIPYSDHSSYSELCAFVAALKPCQVVPIVSRQPC 303
>gi|402855732|ref|XP_003892469.1| PREDICTED: 5' exonuclease Apollo [Papio anubis]
Length = 532
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 152/350 (43%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+ L+IG H + + G +T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IQPLEIGESHVLPL--DEIGRETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + TL K + LYLDNT CN + PSR+ AA QI
Sbjct: 122 RYTPSMLKEPA--LTLGKQ-----IHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNIKIGLYNLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVGH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 MEICHSNMLRWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 259 -----RKIHSSHPDIHVIPYSDHSSYSELCAFVAALKPCQVVPIVSRQPC 303
>gi|405973753|gb|EKC38445.1| DNA cross-link repair 1B protein [Crassostrea gigas]
Length = 609
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 153/345 (44%), Gaps = 91/345 (26%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W ++++FLTHLH DH GLSS+W ++CS +T KL ++ +D SL
Sbjct: 11 IAVDFWKTRECPNARLFFLTHLHGDHIVGLSSSWQHK-IYCSEVTGKLLVERY-DIDASL 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I L+ G H + V S + + V I+A+HCPG SVM LF G F +LYTGDF
Sbjct: 69 ISPLETGCSHILYV---DSDQIEQMSVTVINAHHCPG----SVMFLFEGYFSKILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ---------- 171
R+++ + + RN L D LYLDNTY + FPSRE + +Q
Sbjct: 122 RFDSEMKDDPLMRNIL-------HADTLYLDNTYNSPKCVFPSREESFKQMMEIIQSHED 174
Query: 172 --------------------------IWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
I V P Q LL D+F T + R+ VP
Sbjct: 175 FHIKIGLRNLGKEDLLVKIAVDLNEWIKVPPSFFQLAELLDLPDVFITGETDARIEVVPF 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
YS S +E N PTI ++P+ L L S F + ++
Sbjct: 235 YSISNKNIERWNKECPTIALLPTSL---------YTGLEMSPFCNQEN------------ 273
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
+Y VPYSDHS F E+ EF+ L++P I IV
Sbjct: 274 --------------VYIVPYSDHSSFDELIEFVKLIKPGCIYPIV 304
>gi|149708883|ref|XP_001495792.1| PREDICTED: 5' exonuclease Apollo [Equus caballus]
Length = 533
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 155/346 (44%), Gaps = 97/346 (28%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS ++A L +
Sbjct: 11 IAVDFWSLRRAGCARLFFLSHMHSDHTVGLSSTWAR-PLYCSPISAYLLHRHL-QVSKRW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G +T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEIGRETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + + ++ K + LYLDNT CN + PS++ AA+QI
Sbjct: 122 RYTPS-----MLKEPALRVGKQ--IHTLYLDNTNCNPALVLPSQQEAARQIVELIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HHIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 VEICHSAMLHWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVS 311
+ R H I+ +PYSDHS ++E+ F++ ++P + IVS
Sbjct: 259 -----RKICRSHPDIHIIPYSDHSSYSELRAFVSALKPCQVVPIVS 299
>gi|301605077|ref|XP_002932166.1| PREDICTED: DNA cross-link repair 1B protein isoform 1 [Xenopus
(Silurana) tropicalis]
gi|301605079|ref|XP_002932167.1| PREDICTED: DNA cross-link repair 1B protein isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 517
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 160/362 (44%), Gaps = 100/362 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W +++FL+H+HSDHT GLSS W R PL+CS +TAK+ K + +
Sbjct: 11 IAVDFWQTRRCSHIRLFFLSHMHSDHTMGLSSTWNR-PLYCSPVTAKVLKYKL-QVSNTW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I L+IG H + + + G +T V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 INPLEIGEPHMLPL--DNKGLETLT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ L K +D+LYLDNT C+ PSR A I
Sbjct: 122 RYSP----YMFCYPPLSNKTK---IDVLYLDNTNCDPEQKLPSRLEATNMIKEIIEKHPD 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P+RL+ +H+L ++FT + R+ V +
Sbjct: 175 HDIMIGVYNIGKESLLVDLAKTFKTWVVVSPQRLELLHILEMENVFTIEEGAGRIHLVDQ 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ + N + PT+ I+P+
Sbjct: 235 SEVNYINMVRWNRVCPTLAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGR 325
V +HK ++ VPYSDHS F E++EF++ ++PS++ +V + +C Y+
Sbjct: 259 -----RKVKLWHKDVHVVPYSDHSSFEELQEFVSRLKPSSVVPVVKAKACET---YFKQY 310
Query: 326 LC 327
LC
Sbjct: 311 LC 312
>gi|426216286|ref|XP_004002396.1| PREDICTED: 5' exonuclease Apollo [Ovis aries]
Length = 542
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 150/350 (42%), Gaps = 97/350 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FLTH+HSDHT GL+S W R PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGSARLFFLTHMHSDHTVGLTSTWTR-PLYCSPITAYLLHRHL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G +T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEVGRETMT-VTLLDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S + R L K + LYLDNT N PS+E AA+QI
Sbjct: 122 RYTPSMLKEPALR--LGKQ-----IHTLYLDNTNYNPDLVLPSQEEAARQIVDLIRKHPQ 174
Query: 173 -------------------------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
WV P RL+ + LLG D+FT + R+ AV
Sbjct: 175 HNVKIGLYSLGKESLLERLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDH 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ N HPTI I+P+
Sbjct: 235 MEICHSAMLRWNQTHPTIAILPTS------------------------------------ 258
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ R H I+ +PYSDHS ++E+ F+ ++P + IV C
Sbjct: 259 -----RKIYRSHPDIHVIPYSDHSSYSELRVFVAALKPCQVVPIVRRQPC 303
>gi|390346028|ref|XP_003726462.1| PREDICTED: 5' exonuclease Apollo-like [Strongylocentrotus
purpuratus]
Length = 635
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 161/345 (46%), Gaps = 93/345 (26%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W + S+V+FL+H HSDHT GLSS W R P++CS +T K+ K G+ SL
Sbjct: 11 IAVDYWRRNKSPSSKVFFLSHAHSDHTSGLSSTW-RYPIYCSEVTGKVVVAKC-GVKQSL 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+ L +G+ H I + +G++T V IDANHCPG + + LF G FG LYTGDF
Sbjct: 69 IKTLSVGNGHIIPL--DETGKETMT-VTLIDANHCPG----ATIFLFEGYFGRFLYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR--------EVAAQ--- 170
R+ + +T++ + VD LYLDNTY + FP EV A+
Sbjct: 122 RFHPC-----MFSDTVLGLNRP--VDRLYLDNTYNSPENNFPGEDDCKVKIMEVLAEYPY 174
Query: 171 -------------------------QIWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
+I V PERL + LL D+FT TS R+R +P
Sbjct: 175 SNVVLGMHQLGKEDLLMDIAEFYGGKIQVTPERLSIIELLDCKDVFT--TSEARIRVIPV 232
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
++ + +E N+ PTI I+PS + ++S+ R+
Sbjct: 233 HTITNSAVEQWNSEFPTIVIIPSAI--------------------FRSQRRSRLAN---- 268
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
H ++ +PYS HS + E+ F+ V+P + IV
Sbjct: 269 -----------HPSVFIIPYSSHSSYNELIRFVTQVRPRKVIPIV 302
>gi|260837252|ref|XP_002613619.1| hypothetical protein BRAFLDRAFT_226963 [Branchiostoma floridae]
gi|229299005|gb|EEN69628.1| hypothetical protein BRAFLDRAFT_226963 [Branchiostoma floridae]
Length = 302
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 158/348 (45%), Gaps = 101/348 (29%)
Query: 7 SVDRW------TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
+VD W G++++FLTH+H+DHT GLS +W + P++CS +TAKL KF + +
Sbjct: 12 AVDFWRSRQCDLTGTRLFFLTHMHADHTSGLSPSW-KHPIYCSEVTAKLLICKF-DITPA 69
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
L+R L +G H + + +G++T + V DANHCPG +VM LF+G FG + YTGD
Sbjct: 70 LVRPLAVGESHILPL--DETGQET-MTVTVFDANHCPG----AVMFLFQGYFGSIFYTGD 122
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ---------- 170
FR+ E+ N +D+LYLDNTYC+ FPSR A Q
Sbjct: 123 FRYSPEMFDHEVLANR-------QSIDVLYLDNTYCSPECKFPSRTEATQMIKDIICRHP 175
Query: 171 --------------------------QIW--VWPERLQTMHLLGFHDIFTTKTSLTRVRA 202
Q W V P+RL+T+ LL ++FT + R+
Sbjct: 176 GHDIVLGVSSNALGKEDMLVELAMTFQTWVVVTPQRLETLKLLELPNVFTDRED-GRIWV 234
Query: 203 VPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQ 262
+Y + +E N PTI I+ S L + G
Sbjct: 235 TLKYQITRKNIERWNQERPTIAIIASSL------------------------YAGLDGI- 269
Query: 263 TEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
+++ VPYSDHS + E+ EF++ ++P +I +V
Sbjct: 270 ---------------SHVHVVPYSDHSSYRELHEFVSRLKPRSIIPVV 302
>gi|432103989|gb|ELK30822.1| 5' exonuclease Apollo [Myotis davidii]
Length = 498
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 148/317 (46%), Gaps = 69/317 (21%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L +
Sbjct: 11 IAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAFLLHRHL-QVSKRW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G +T V +DANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPLD--EIGRETMT-VTLMDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEAS--NERA-EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPER 178
R+ + E A +G+ + LYLDNT CN + PS+ AAQQI V R
Sbjct: 122 RFTPAMLKEPALSVGKQ----------IHTLYLDNTNCNPALDLPSQHEAAQQI-VALIR 170
Query: 179 LQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLK 238
H + D+FT + R+ AV + N PTI I+P+
Sbjct: 171 KHPQHDVKI-DVFTVEEKAGRIHAVNHTEICHSAMLRWNQARPTIAILPT---------- 219
Query: 239 GGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFL 298
+ K+ + H I+ VPYSDHS + E+ F+
Sbjct: 220 ------------------------SRKIHSS-------HPNIHIVPYSDHSSYPELRAFV 248
Query: 299 NLVQPSNIRGIVSSSSC 315
++P + IVS C
Sbjct: 249 TALKPCQVLPIVSRQPC 265
>gi|432866191|ref|XP_004070730.1| PREDICTED: 5' exonuclease Apollo-like [Oryzias latipes]
Length = 582
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 159/345 (46%), Gaps = 96/345 (27%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
++VD W ++++FL+H+H+DHT GL+S W+ P++CS +TAKL LK +
Sbjct: 13 LAVDFWHVRKCPSARLFFLSHMHADHTVGLTSTWSGRPIYCSPVTAKLLHLKLKVKE-QW 71
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I L+IG + + + G++T V IDANHCPG +VM LF+G FG +LYTGDF
Sbjct: 72 IHPLEIGEQNLLPL--DDIGKETLT-VTLIDANHCPG----AVMFLFQGYFGSILYTGDF 124
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--------- 172
R+ S R +N + +D+LYLD+T C+ + PSR+ A QQI
Sbjct: 125 RYSPSMLREPCLKNNI-------TIDVLYLDDTNCDPNRTLPSRQKATQQIKEIIRSHPD 177
Query: 173 -----------------------WVWPE----RLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
W E R++T+ +L D+FTT+ R R V
Sbjct: 178 HNVVIGLYTLGKESLLLELAKEFQTWVEVSYDRMETLKVLELPDVFTTEQGTGRFRVVDH 237
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ +L+ N PT+ I+P+ P +
Sbjct: 238 SEITSASLQDWNNEQPTLAILPTSRPLI-------------------------------- 265
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
+H ++ VPYSDHS + E+ +F++ ++P ++ IV
Sbjct: 266 ---------SYHPSVHVVPYSDHSSYQEVVDFVSTLKPMSLIPIV 301
>gi|47228753|emb|CAG07485.1| unnamed protein product [Tetraodon nigroviridis]
Length = 386
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 155/371 (41%), Gaps = 120/371 (32%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
++VD W G++++FL+H+HSDHT GL+S W+ P++CS +TA L LK +
Sbjct: 13 LAVDFWHVRKCPGTRLFFLSHMHSDHTVGLTSTWSHRPIYCSAITAALLRLKL-QVKERW 71
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYT--- 118
I L++ V+ K + V +DANHCPG SVM LF+G FG +LYT
Sbjct: 72 IHPLELD---EPCVLPLDDIGKETMTVTLMDANHCPG----SVMFLFQGYFGSILYTGQW 124
Query: 119 ---------------------GDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCN 157
GDFR+ S R R + +D+LYLD+T C+
Sbjct: 125 DARTGLHLQLIFRNISNLFFAGDFRYTPSMLREPCLRTNI-------TIDVLYLDDTNCD 177
Query: 158 SSYAFPSREVAAQQI----------------------------------W--VWPERLQT 181
+ + PSR+ A QQI W V +R++T
Sbjct: 178 PNRSIPSRQSATQQIKEIIRRHPTHCVVIGLYALGKESLLLELAMEFKTWIEVSVDRMET 237
Query: 182 MHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGG 241
+ L D+FTT R+R V + N PT+ I+P+ P V
Sbjct: 238 LKALELPDVFTTDPGAGRIRVVEQSEIRAAAFHQWNKEEPTLAILPTSRPLV-------- 289
Query: 242 SLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLV 301
FH IY VPYSDHS + E+E+F++ +
Sbjct: 290 ---------------------------------SFHPNIYVVPYSDHSSYQELEDFVSAL 316
Query: 302 QPSNIRGIVSS 312
QP+++ IV +
Sbjct: 317 QPTDVVPIVGN 327
>gi|443694810|gb|ELT95851.1| hypothetical protein CAPTEDRAFT_225584 [Capitella teleta]
Length = 465
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 164/373 (43%), Gaps = 107/373 (28%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W ++V+FL+H+H DH +GL+ W R + CS LT +L KF D S
Sbjct: 25 IAVDHWKMTPMSPARVFFLSHMHEDHMKGLTPTW-RHKIHCSPLTKRLLIDKF-QFDPSQ 82
Query: 62 IRVLDIGSWHSISVV-SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
+ L+ G H +SV S +S + V VI DA HCPG SVM +F+G FG + YTGD
Sbjct: 83 VVELEPGEDHLVSVTDSETSSFRMTVSVI--DAAHCPG----SVMFIFQGYFGKIFYTGD 136
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI-------- 172
FR+ + EI N D VD+LYLDNT+C+ + FP+R A ++I
Sbjct: 137 FRFSS-----EIMDNLPANYTTD--VDVLYLDNTFCSPNCVFPTRAAATEEIIKAIEQSS 189
Query: 173 ---------------------------W--VWPERLQTMHLLGFHDIFTTKTSLTRVRAV 203
W V RL+ ++LL + F T S +R+ AV
Sbjct: 190 DAAKILIGVRNLGKETLLMEIAKRFQCWIQVTERRLEMINLLNLPNYFQTG-SESRIEAV 248
Query: 204 PRYSFSIDTLE-SLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQ 262
P +D ++ S HP + + LP +L+ + + A
Sbjct: 249 P-----MDQIKSSYMKNHPEMMAI----------------LPTALYIEHPHAFTAC---- 283
Query: 263 TEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI--------RGIVSSSS 314
K I VPYSDHS + E+ EF+ +V+P + RG+ S
Sbjct: 284 ---------------KNISLVPYSDHSSYAELHEFVAMVRPRKVVPIVGEKSRGVFGGSV 328
Query: 315 CYVDPLYYFGRLC 327
C+ + F R C
Sbjct: 329 CHRADMSCFDRYC 341
>gi|198432441|ref|XP_002122832.1| PREDICTED: similar to DNA cross-link repair 1B (PSO2 homolog, S.
cerevisiae) [Ciona intestinalis]
Length = 868
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 161/328 (49%), Gaps = 35/328 (10%)
Query: 6 ISVD--RWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIR 63
+SVD + T +++FLTH+HSDHT GLSS W ++C+ +TA L LKF G+ + I+
Sbjct: 11 VSVDCFKETADERLHFLTHMHSDHTVGLSSRWCHT-VYCTEVTATLMKLKF-GISDTYIQ 68
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
++D + +S T + V I NHCPG + M LF D +LYTGDFR+
Sbjct: 69 IMDDNHTYCLSCGH------TNICVRMIPTNHCPG----ACMFLFETDSTRILYTGDFRF 118
Query: 124 EASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIW-VWPERLQTM 182
NE E+ + ++ +D+LYLDNTYC S FPS++ A I + +
Sbjct: 119 ---NEMVEMEVQKCLNPIR--PIDLLYLDNTYCEPSCNFPSQQEAVLNIISICRHHIDER 173
Query: 183 HLLGFHDIFTTKTSLTRVRAVPRYSFSIDT-LESLNTMHPTIG-IMPSGLPWVVKPLKGG 240
+ G I +A+ Y + + LE L ++P G + G+ +
Sbjct: 174 IVFGVSYIGHENLLCLVAKALQEYVYVEEAMLERLLLINPEYGKVFRVGMSARL------ 227
Query: 241 GSLPGSLFSSYQSKWRATGGT---QTEKLKEAL--GSVDRFHKYIYSVPYSDHSCFTEIE 295
++P S+ + S+W A T +L G++ Y++PYS+HS + E+E
Sbjct: 228 NAVPNSVLNG--SQWSAVPTVLIKPTARLGSMRISGNLSTVGVITYTIPYSNHSNYQELE 285
Query: 296 EFLNLVQPSNIRGIVSSSSCYVDPLYYF 323
+F+ LV+P I+ IV + Y YF
Sbjct: 286 KFVKLVKPLKIKPIVLGRTSYPGMESYF 313
>gi|196000276|ref|XP_002110006.1| hypothetical protein TRIADDRAFT_21698 [Trichoplax adhaerens]
gi|190588130|gb|EDV28172.1| hypothetical protein TRIADDRAFT_21698, partial [Trichoplax
adhaerens]
Length = 306
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 154/346 (44%), Gaps = 93/346 (26%)
Query: 6 ISVDRWTE----GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I++D W E S+++FL+H H+DH +GL+S+W+ ++CS +TA L + + L
Sbjct: 13 IAIDYWRERQCNQSKLFFLSHYHADHMEGLNSSWSLK-IYCSEITASLLIHEM-SIRSDL 70
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
+ L G H I V G +T + V +DANHCPG +VM LF G FGC+LYTGDF
Sbjct: 71 VVSLQTGQPHVIPV--DEMGCET-MSVTLLDANHCPG----AVMFLFEGYFGCILYTGDF 123
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ----------- 170
R++ + G + VD L+LDNTYCN FP+R A Q
Sbjct: 124 RYD-DQLHLQPGFP------QSKQVDQLFLDNTYCNPKAQFPTRHDAFQIILNIIQQNPT 176
Query: 171 -------------------------QIWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
I V +R+Q ++LLG ++FT + + R+ +
Sbjct: 177 SNVIIGLTHLGKEKLLEQLAVKLQTMIVVDSKRMQRLNLLGCLNVFTDQMDMGRIIVKYK 236
Query: 206 YSFSIDTLESLNTMH-PTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTE 264
+ T+E N PTI I+P+ L YQ +
Sbjct: 237 NEITDSTIERWNQQSGPTIAIIPTAL------------------YIYQDRPPI------- 271
Query: 265 KLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
K IY V YSDHS + E+ +F+++V+P I I+
Sbjct: 272 -----------LDKRIYVVHYSDHSNYNELRQFVSVVKPCRITPII 306
>gi|255543475|ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
gi|223547811|gb|EEF49303.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
Length = 493
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 152/324 (46%), Gaps = 51/324 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+ YFLTH H+DH GL+ W+ GP++C++LTA+L L ++ S I LD+ + ++
Sbjct: 176 QNCSAYFLTHFHADHYGGLTKGWSHGPIYCTQLTARLLKLCL-YVNSSFIHPLDLNTEYA 234
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
I V V ++ANHCPG + +L FR G C L+TGDFR +
Sbjct: 235 IEG----------VRVTLLEANHCPG----AALLHFRLSNGLCYLHTGDFRASKVMQSYH 280
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIW-----VWPERLQTMHLLG 186
+ N V A LYLD TYCN Y FPS+E + ++ +T+ ++G
Sbjct: 281 LLVNQKVNA--------LYLDTTYCNPKYKFPSKEDVLNYVVRVTKDFLKQQPETLIVVG 332
Query: 187 FHDI--FTTKTSLTRVRAVPRYSFSI--DTLESL--NTMHPTIGIMPSGLPWVVKPLKGG 240
+ I S+++ V Y+ + LES + + ++ P P V P+
Sbjct: 333 AYSIGKECVYLSISKALGVKIYASASRRQILESFGWSDLSRSLCTQPKDTPLHVLPI--- 389
Query: 241 GSLPGSLFSSYQSKW----------RATGGTQTEKLKEALGSVDRFHK---YIYSVPYSD 287
SL Y K+ R TG T +E + + L + K IY VPYS+
Sbjct: 390 SSLRVETLKDYLKKYINQYRAVLAFRPTGWTYSENVGKKLDLIRPISKGNVTIYGVPYSE 449
Query: 288 HSCFTEIEEFLNLVQPSNIRGIVS 311
HS FTE++EF+ ++P I V+
Sbjct: 450 HSSFTELKEFVEFLKPDKIIPTVN 473
>gi|156399461|ref|XP_001638520.1| predicted protein [Nematostella vectensis]
gi|156225641|gb|EDO46457.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 156/348 (44%), Gaps = 101/348 (29%)
Query: 6 ISVDRWTE----GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD WT S+++FL+H H+DHTQGL+S+W + ++CS +T ++ K ++ L
Sbjct: 11 IAVDIWTRRVCLKSRLFFLSHAHADHTQGLTSSWTKYKIYCSEITKRILMHKL-NVNEDL 69
Query: 62 IRVLDIGSWHSISVVSPSSGE-KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
+ L +G VV P E + + V +DANHCPG +VM LF G FG +LYTGD
Sbjct: 70 LVALPLGE----PVVLPLDEEGREMLTVTLLDANHCPG----AVMFLFEGYFGTILYTGD 121
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIW------- 173
FR++ + L ++LK +D LYLDNTYC+ S FP++ + I+
Sbjct: 122 FRFKPA--------MLLHESLKGKQIDKLYLDNTYCHPSCNFPTKTKTMKLIFDIIRRRL 173
Query: 174 -----------------------------VWPERLQTMHLLGFHDIFTTKTSLTRVRAV- 203
V P++++ + L D+FT++ T++
Sbjct: 174 GDDIIIPLRTLGKEDLLVKIALEFNCWIGVTPKKMELLKWLDLPDVFTSEWHKTQIIVAQ 233
Query: 204 -PRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQ 262
P S+++ P+V+ LP +L+ +S
Sbjct: 234 HPVNSYTLSQFRD---------------PFVI--------LPTALYEGEKS--------- 261
Query: 263 TEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
Y+ +VPYSDHS F E+ F++ + P+ + +V
Sbjct: 262 --------NPYRHLPNYV-TVPYSDHSSFKELLRFVSGIAPAEVIPLV 300
>gi|26338211|dbj|BAC32791.1| unnamed protein product [Mus musculus]
Length = 213
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 98/171 (57%), Gaps = 20/171 (11%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FLTH+H DHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRL-QVSKHW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G++T + V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEIGQET-MTVTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
R+ S + + + LYLDNT CN + PSR+ A QQI
Sbjct: 122 RYTPSMLKEP-------ALILGKQIHTLYLDNTNCNPALVLPSRQEATQQI 165
>gi|148675639|gb|EDL07586.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_a [Mus musculus]
Length = 213
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 98/171 (57%), Gaps = 20/171 (11%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FLTH+H DHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRL-QVSKHW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L++G H + + G++T + V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEVGESHVLPL--DEIGQET-MTVTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
R+ S + + + LYLDNT CN + PSR+ A QQI
Sbjct: 122 RYTPSMLKEP-------ALILGKQIHTLYLDNTNCNPALVLPSRQEATQQI 165
>gi|149030436|gb|EDL85473.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_b [Rattus norvegicus]
Length = 221
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 100/171 (58%), Gaps = 20/171 (11%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FL+H+H DHT GLSS WAR PL+CS +TA L + +
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRL-QVSKQW 68
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
IR L+IG H + + G++T + V IDANHCPG SVM LF G FG +LYTGDF
Sbjct: 69 IRALEIGESHVLPL--DEIGQET-MTVTLIDANHCPG----SVMFLFEGYFGTILYTGDF 121
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
R+ S + TL K + LYLDNT CN + PSR+ A QQI
Sbjct: 122 RYTPSMLKEPAL--TLGKQ-----IHTLYLDNTNCNPALVLPSRQEATQQI 165
>gi|413952238|gb|AFW84887.1| hypothetical protein ZEAMMB73_126664 [Zea mays]
Length = 205
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 76/109 (69%), Gaps = 2/109 (1%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSS--AWARGPLFCSRLTAKLFPLKFPGLD 58
ME+GL+SVD+++ GSQ YFLTHLH DHT+GL + W GPL+CS TA+L P++FPG+D
Sbjct: 1 MEEGLVSVDKFSGGSQAYFLTHLHQDHTRGLGAVGGWRHGPLYCSPTTARLLPIRFPGID 60
Query: 59 LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLL 107
SL+R L G+ SI + SPSSG+ + V AI A HCPG + LL
Sbjct: 61 ASLLRPLAPGASASIYLFSPSSGQSLSLHVTAIPALHCPGTSPLPIRLL 109
>gi|340502457|gb|EGR29145.1| hypothetical protein IMG5_161990 [Ichthyophthirius multifiliis]
Length = 587
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 6 ISVDRWTEGSQ------VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDL 59
I VD ++ G Q +YFLTH+HSDH QGLS W GP++CS+ T +L KFP L
Sbjct: 9 IVVDEFSYGKQNPLKNYLYFLTHMHSDHYQGLSQNWNYGPIYCSKTTKRLLLQKFPH--L 66
Query: 60 SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTG 119
+ LD+ I + + K ++ V D+NHCPG SVM +F G FG +L+TG
Sbjct: 67 KRVMALDMNEEIRICI---NEQNKIYISVYLFDSNHCPG----SVMFMFEGYFGRILHTG 119
Query: 120 DFRWEASNERAEIGRNTLVKALKDD---------VVDILYLDNTYCNSSYAFPSREVAAQ 170
D R+ I +N ++ L++ +D DNTYC+ + FP ++ A Q
Sbjct: 120 DMRFSL----KMIEKNPILYPLENKDPQKGRCSLQIDECIFDNTYCDPEFQFPDQDKAKQ 175
Query: 171 QI 172
+
Sbjct: 176 ML 177
>gi|145553259|ref|XP_001462304.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74830382|emb|CAI39059.1| Putative DNA interstrand cross-link repair protein [Paramecium
tetraurelia]
gi|124430143|emb|CAK94931.1| unnamed protein product [Paramecium tetraurelia]
Length = 471
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 150/323 (46%), Gaps = 61/323 (18%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
+YFLTH+HSDH QG+S+ W G +FCS +T L +KFPG + +I +
Sbjct: 26 IYFLTHMHSDHYQGISNGWDYGQIFCSTVTKALLLVKFPG----------VKGVMTIPMK 75
Query: 77 SPSSGE---KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEAS----NER 129
+P+ E K V+V +DANHCPG +VM+LF+G FG +L+TGD R+ N +
Sbjct: 76 TPTEIELCKKYKVKVTFLDANHCPG----AVMILFQGYFGTILHTGDMRFNMEMIPKNPQ 131
Query: 130 AEIGRNTLVKALKDDV-VDILYLDNTYCNSSYAFPSREVAAQQIW--------------- 173
+N + K + +D L LDNTYC+ + FP+R+ A + +
Sbjct: 132 LYPPQNISNENGKCSIDIDELILDNTYCDPIFKFPNRDEAFKMLCEIIDKNPNNRVFLCV 191
Query: 174 --VWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLP 231
V E L M L H + R V +F ++ +L+ I ++ G
Sbjct: 192 DSVGKEEL--MVELAKHYDTVIVVNEQRYEIVTAMNFYVEYF-TLDKTQGWIEVIRKG-- 246
Query: 232 WVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCF 291
V + LK ++ + + W T Q + Y +PYS HS F
Sbjct: 247 EVEERLKDKNTIAITA-----TGWANTTSYQMPDNRR------------YVIPYSLHSNF 289
Query: 292 TEIEEFLNLVQPSNIRGIVSSSS 314
E+ +F+ +QP+ ++ +V +++
Sbjct: 290 NEMHQFVKSIQPALLQKVVKNNT 312
>gi|440911917|gb|ELR61536.1| DNA cross-link repair 1A protein [Bos grunniens mutus]
Length = 1051
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 152/334 (45%), Gaps = 64/334 (19%)
Query: 11 WTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
W EG YFLTH HSDH GLS + P++CS++T L K L +
Sbjct: 732 WVEGCTAYFLTHFHSDHYAGLSKNFT-FPIYCSKITGNLLKSK-----------LHVQEQ 779
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNER 129
+ + + + ++VI +DANHCPG +VM+LF G +L+TGDFR + S ER
Sbjct: 780 YIHPLPTDTECIVNGIKVILLDANHCPG----AVMILFCLPNGHVILHTGDFRADPSMER 835
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL-- 179
+ +G + V LYLD TYC+ Y+FPS++ A + + + P L
Sbjct: 836 SLLGCHK---------VHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFETVTLNPRALVV 886
Query: 180 -------QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSI---------DTLESLNTMHPTI 223
+ L D+ +K ++R + FSI D SL + P +
Sbjct: 887 CGTYSIGKEKIFLAIADVLGSKVGMSREKYNTLQCFSIPEVSSFITTDMCNSLVHLLPMM 946
Query: 224 GIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV---DRFHKYI 280
I GL +K K GG L +R TG T + KL +L + + + I
Sbjct: 947 QINFKGLQNHLK--KCGGKYNQIL------AFRPTGWTHSNKLT-SLADIIPQTKGNISI 997
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
Y +PYS+HS + E++ F+ ++P I V+ S
Sbjct: 998 YGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGS 1031
>gi|294955916|ref|XP_002788744.1| DNA cross-link repair protein SNM1, putative [Perkinsus marinus
ATCC 50983]
gi|239904285|gb|EER20540.1| DNA cross-link repair protein SNM1, putative [Perkinsus marinus
ATCC 50983]
Length = 388
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 150/323 (46%), Gaps = 51/323 (15%)
Query: 10 RWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS 69
R + S+ YFLTH H DHT GL+ + RG ++CS +TA+L ++ G+D S + L++G
Sbjct: 42 RLRQDSRTYFLTHFHGDHTWGLTKGFCRGTIYCSPITAELV-IQVIGVDPSRVVKLELGE 100
Query: 70 WHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRWEASNE 128
I+ ++V IDANHCPG +VM LF G G L+TGDFR A+
Sbjct: 101 PTEIA----------GIKVTCIDANHCPG----AVMFLFCGTGGWTGLHTGDFRASAA-- 144
Query: 129 RAEIGRNTLVKALKD-DVVDILYLDNTYCNSSYAFPSREVA---AQQIWVWPERLQTMHL 184
L+K + V++ ++LD TY + + PSRE A +I TM +
Sbjct: 145 --------LLKTVPAYGVINTVWLDTTYSDRRFVHPSREEALDMISRIVTKENEPGTMFV 196
Query: 185 LGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGL-------PWVVKPL 237
+G + + + VR I + + G +P L V +
Sbjct: 197 VGGYRLGKESCA---VRISEVLGKKIFVPKKRRKIMEICGAIPEKLIAEKEDYGVVFDAM 253
Query: 238 KGGGSLPGSLFSSYQSKW------RATGGTQTEKLKEALGSVDRFHKYI-YSVPYSDHSC 290
GS P SL + + R TG T+ KE+ +F + YS+PYS+HS
Sbjct: 254 GRVGSSPDSLADFLDAGYSKVVGFRCTGWTR----KESCWRSSKFPGCVLYSIPYSEHSS 309
Query: 291 FTEIEEFLNLVQPSNIRGIVSSS 313
FTE+ EFL VQP + G V S
Sbjct: 310 FTELVEFLKHVQPRRVIGTVGRS 332
>gi|308805462|ref|XP_003080043.1| Predicted hydrolase involved in interstrand cross-link repair (ISS)
[Ostreococcus tauri]
gi|116058502|emb|CAL53691.1| Predicted hydrolase involved in interstrand cross-link repair (ISS)
[Ostreococcus tauri]
Length = 517
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 167/376 (44%), Gaps = 69/376 (18%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSA-WARGPL----FCSRLTAKLFPLKFPG 56
I++D W + + YFLTH H+DH GL + W+ L +C +T ++ K+P
Sbjct: 19 IAIDFWAPSASRNIRAYFLTHAHADHVVGLGARRWSPETLGARIYCDEITREILVSKWPT 78
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
L ++ L+ H + + +T +EV IDA HCPG SV++ G G L+
Sbjct: 79 LGRH-VKALERNRGHGVRLT-----RETTIEVTLIDAGHCPG----SVVVCVEGPNGRLV 128
Query: 117 YTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVW- 175
+TGDFR E I R L +A+ VD L+LDNTYC+ +AFP R A + I +
Sbjct: 129 HTGDFRREDW-----IAREALPRAMTRAPVDYLFLDNTYCHPKHAFPGRAEATEDIVRFC 183
Query: 176 ---PERLQTMHL--LGFHDIFTTKTS---------------------LTRVRAVPRYSFS 209
P R + + LG D+ + LT RA R +F
Sbjct: 184 VSNPGRAIVLGIDSLGKEDLVIAVSEAIGAPVEIPDERFLPSSYTRFLTGHRACERENFI 243
Query: 210 IDTL-ESLNTMH-------PTIGIMPSGLPWVVKPLKGGGSLPGSLF----SSYQSKWRA 257
++ ESL+ P + PS L +VK L+ + P ++ S+ + +
Sbjct: 244 RRSMNESLDVTRRTHVRCVPKQHVRPSTLRALVKGLRHDDAPPLAILPTGWSAIERQRGE 303
Query: 258 TGGTQTEKLKEALGSVDRFHK---YIYSVPYSDHSCFTEIEEFLNLVQPSNIRG---IVS 311
G + + SV F I +VPYS H+ + E+E F+ ++P+ + G + +
Sbjct: 304 GAGVSGPSEHDPIDSVVEFDDEAGRIVAVPYSLHAPYDELEAFVRALRPACVFGNTRVDA 363
Query: 312 SSSCYVDPLYYFGRLC 327
+ DP +F LC
Sbjct: 364 DAEAPRDPAVWFESLC 379
>gi|294898790|ref|XP_002776376.1| DNA cross-link repair protein SNM1, putative [Perkinsus marinus
ATCC 50983]
gi|239883314|gb|EER08192.1| DNA cross-link repair protein SNM1, putative [Perkinsus marinus
ATCC 50983]
Length = 388
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 148/323 (45%), Gaps = 51/323 (15%)
Query: 10 RWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS 69
R + S+ YFLTH H DHT GL+ + RG ++CS +TA+L ++ G+D S + L++G
Sbjct: 42 RLRQDSRTYFLTHFHGDHTWGLTKGFCRGTIYCSPITAELV-IQIIGVDPSRVVRLELGE 100
Query: 70 WHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRWEASNE 128
I+ V+V +DANHCPG +VM LF G G L+TGDFR
Sbjct: 101 PTEIA----------GVKVTCLDANHCPG----AVMFLFCGAGGWTGLHTGDFR------ 140
Query: 129 RAEIGRNTLVKALKD-DVVDILYLDNTYCNSSYAFPSREVA---AQQIWVWPERLQTMHL 184
L+K + V++ ++LD TY + + PSRE A +I TM +
Sbjct: 141 ----ASTALLKTVPAYGVINTVWLDTTYSDRRFVHPSREEALDMISRIVTKENEPGTMFV 196
Query: 185 LGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGL-------PWVVKPL 237
+G + + + VR I + + G +P L V +
Sbjct: 197 VGGYRLGKESCA---VRISEVLGKKIFVPKKRRKIMEICGAIPEKLIAEKEDYGVVFDAM 253
Query: 238 KGGGSLPGSLFSSYQSKW------RATGGTQTEKLKEALGSVDRFHKYI-YSVPYSDHSC 290
GS P SL + + R TG T+ KE+ +F + YS+PYS+HS
Sbjct: 254 GRIGSSPDSLADYLDAGYSKVVGFRCTGWTR----KESCWRSSKFPGCVLYSIPYSEHSS 309
Query: 291 FTEIEEFLNLVQPSNIRGIVSSS 313
FTE+ EFL VQP + G V S
Sbjct: 310 FTELVEFLKHVQPRRVIGTVGKS 332
>gi|168063695|ref|XP_001783805.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664687|gb|EDQ51397.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 334
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 150/321 (46%), Gaps = 45/321 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFLTH HSDH GL+ +W+ GP+FC+ +TA+L + G+D +R + +G
Sbjct: 17 EGCKAYFLTHFHSDHYGGLTRSWSHGPIFCTEITARLVSMHL-GVDSHWLRPMKLG---C 72
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRWEASNERAE 131
+S+V V+V ++ANHCPG + ++LF+ G L L+TGDFR S +
Sbjct: 73 VSIVEG-------VKVQFLEANHCPG----AALILFQTSCGQLILHTGDFRACKSMQD-- 119
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI-----WVWPERLQTMHLLG 186
L + LYLD TYCN Y FP +E + +T+ +G
Sbjct: 120 ------YPELLGARITSLYLDTTYCNPKYNFPLQEDVINHVVKLTSAALSRNPKTLVTVG 173
Query: 187 FHDIFTTKTSLTRVRAVPRYSFS----IDTLESLNTMHPTIGIMPSG-------LPWVVK 235
+ I + L +A+ ++ + TL +L+ T + LP
Sbjct: 174 AYSIGKERVYLGIAKALSLRIYADKRRVRTLRALDWPDLTDRLCSDASSSRLHVLPISHL 233
Query: 236 PLKGGGSLPGSLFSSYQS--KWRATGGTQTEKLKEALGSVDRFHK---YIYSVPYSDHSC 290
+ SL +Y + +R TG T +EK+ L + IY VPYS+HS
Sbjct: 234 NATKLRAYMQSLHPTYSAVLAFRPTGWTYSEKIGSNLSELKPQRSGVVTIYGVPYSEHSS 293
Query: 291 FTEIEEFLNLVQPSNIRGIVS 311
++E++EF+ ++P + V+
Sbjct: 294 YSELQEFVKFLRPQKVLATVN 314
>gi|76655155|ref|XP_580486.2| PREDICTED: DNA cross-link repair 1A protein [Bos taurus]
gi|297490989|ref|XP_002698556.1| PREDICTED: DNA cross-link repair 1A protein [Bos taurus]
gi|296472627|tpg|DAA14742.1| TPA: Snm1-like [Bos taurus]
Length = 1051
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 153/334 (45%), Gaps = 64/334 (19%)
Query: 11 WTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
W EG YFLTH HSDH GLS + P++CS++T L K L +
Sbjct: 732 WVEGCTAYFLTHFHSDHYAGLSKNFT-FPIYCSKITGNLLKSK-----------LHVQEQ 779
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNER 129
+ + + + ++VI +DANHCPG +VM+LF G +L+TGDFR + S ER
Sbjct: 780 YIHPLPTDTECIVNGIKVILLDANHCPG----AVMILFCLPNGHVILHTGDFRADPSMER 835
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL-- 179
+ +G + V LYLD TYC+ Y+FPS++ A + + + P L
Sbjct: 836 SLLGCHK---------VHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFETVTLNPRALVV 886
Query: 180 -------QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTI 223
+ L D+ +K +++ + +P S + D SL + P +
Sbjct: 887 CGTYSIGKEKIFLAIADVLGSKVGMSKEKYNTLQCFNIPEVSSFITTDMCNSLVHLLPMM 946
Query: 224 GIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV---DRFHKYI 280
I GL +K K GG L +R TG T + KL +L + + + I
Sbjct: 947 QINFKGLQNHLK--KCGGKYNQIL------AFRPTGWTHSNKLT-SLADIIPQTKGNISI 997
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
Y +PYS+HS + E++ F+ ++P I V+ S
Sbjct: 998 YGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGS 1031
>gi|403284555|ref|XP_003933631.1| PREDICTED: 5' exonuclease Apollo [Saimiri boliviensis boliviensis]
Length = 593
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 121/298 (40%), Gaps = 91/298 (30%)
Query: 54 FPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG 113
P + I+ L++G H + + G +T V IDANHCPG SVM LF G FG
Sbjct: 122 LPRVSKQWIQALEVGESHVLPLDE--IGRETMT-VTLIDANHCPG----SVMFLFEGYFG 174
Query: 114 CLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI- 172
+LYTGDFR+ S + TL K + LYLDNT CN + PSR+ AA QI
Sbjct: 175 TILYTGDFRYTPSMLKEPA--LTLGKQ-----IHTLYLDNTNCNPALVLPSRQEAAHQIV 227
Query: 173 ---------------------------------WVW--PERLQTMHLLGFHDIFTTKTSL 197
WV P RL+ + LLG D+FT +
Sbjct: 228 QLIRKHPQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKA 287
Query: 198 TRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRA 257
R+ AV + N HPTI I+P+
Sbjct: 288 GRIHAVDHMEICHSNMLHWNQTHPTIAILPT----------------------------- 318
Query: 258 TGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
+ K++ + H I+ +PYSDHS ++E+ F+ ++P + IVS C
Sbjct: 319 -----SRKIRSS-------HPDIHVIPYSDHSSYSELRAFVAALKPCEVVPIVSRQPC 364
>gi|15225548|ref|NP_182094.1| sterile alpha motif (SAM) domain-containing protein [Arabidopsis
thaliana]
gi|3386625|gb|AAC28555.1| hypothetical protein [Arabidopsis thaliana]
gi|20197051|gb|AAM14896.1| hypothetical protein [Arabidopsis thaliana]
gi|28973723|gb|AAO64178.1| unknown protein [Arabidopsis thaliana]
gi|29824257|gb|AAP04089.1| unknown protein [Arabidopsis thaliana]
gi|110736829|dbj|BAF00373.1| hypothetical protein [Arabidopsis thaliana]
gi|330255495|gb|AEC10589.1| sterile alpha motif (SAM) domain-containing protein [Arabidopsis
thaliana]
Length = 723
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 148/333 (44%), Gaps = 92/333 (27%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ +++ G ++CS +TAKL +K G+ ++VLD+G +IS
Sbjct: 418 WFLTHFHLDHYQGLTKSFSHGKIYCSLVTAKLVNMKI-GIPWERLQVLDLGQKVNIS--- 473
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
++V DANHCPG S+M+LF G +L+TGDFR+ IG +
Sbjct: 474 -------GIDVTCFDANHCPG----SIMILFEPANGKAVLHTGDFRYSEEMSNWLIGSH- 521
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ-------------------------- 170
+ L LD TYCN Y FP +E Q
Sbjct: 522 ---------ISSLILDTTYCNPQYDFPKQEAVIQFVVEAIQAEAFNPKTLFLIGSYTIGK 572
Query: 171 -------------QIWVWPERLQTMHLLGF--HDI--FTTKTSLTRVRAVPRYSFSIDTL 213
+I++ P +L+ + LGF DI FT K + + VP + TL
Sbjct: 573 ERLFLEVARVLREKIYINPAKLKLLECLGFSKDDIQWFTVKEEESHIHVVPLW-----TL 627
Query: 214 ESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV 273
S + + +V G ++S ++K ++ G +L++ G++
Sbjct: 628 ASFKRLKHVANRYTNRYSLIVAFSPTG-------WTSGKTKKKSPG----RRLQQ--GTI 674
Query: 274 DRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
R Y VPYS+HS FTE++EF+ V P I
Sbjct: 675 IR-----YEVPYSEHSSFTELKEFVQKVSPEVI 702
>gi|290977182|ref|XP_002671317.1| hypothetical protein NAEGRDRAFT_59473 [Naegleria gruberi]
gi|284084885|gb|EFC38573.1| hypothetical protein NAEGRDRAFT_59473 [Naegleria gruberi]
Length = 739
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 161/394 (40%), Gaps = 94/394 (23%)
Query: 10 RWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCS----RLTAKLF--------------- 50
++ G +Y LTHLH+DHT GL+ +W G +FCS RL K F
Sbjct: 15 KYIPGCFIYLLTHLHTDHTGGLTPSWNNGIIFCSEITKRLLLKKFQLQEPERIIALEEGP 74
Query: 51 ----PLKFPG-----LDLSLIRVLDIGSWHSIS--------------------------- 74
PL P D +L D+ W S
Sbjct: 75 TYYIPLVPPSPMQDHTDTNLNIHHDVNIWRDPSYWVKFNNNPSSSQNNSSNLSQSMSVGM 134
Query: 75 --VVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
++ + ++++V IDANHCPG S+M L G FG +L+TGDFR++A
Sbjct: 135 NQALTVYDKDTSYMQVNIIDANHCPG----SIMFLLEGYFGNVLFTGDFRYDA------- 183
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL-QTMHLLGFHD-- 189
R +D +D LYLD+T+ + Y FP+R+ A +Q+ + L T H+L D
Sbjct: 184 -RILQAPCFRDKKIDHLYLDDTFLDKMYDFPTRQEAGKQVISVIKSLPDTTHILIAVDHL 242
Query: 190 -----IFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGG---G 241
+ T+ + VP + + LE +N I+P L + P +G
Sbjct: 243 GKEELMLALATTFQTLIVVPEERYEL--LECMN------DIIPIDL-FTCDPKQGRIFVK 293
Query: 242 SLPGSLFSSYQSKWRATGGTQTEKLKEALGSV---DRFHKYIYSVPYSDHSCFTEIEEFL 298
S S R G T + S D + IY VPYS HS ++EI EF+
Sbjct: 294 SKKEVNMRSIIEHKRIFGATTVGIIPSGWSSAQLKDPTSQLIYRVPYSLHSSYSEIIEFV 353
Query: 299 NLVQPSNIRGIVSSSSCYVDPLYYFGRLCRANQP 332
+ ++P N+ +S ++ G+ C N P
Sbjct: 354 STLKPKNVYS--TSKDENLELRDQVGKYCDYNTP 385
>gi|60359840|dbj|BAD90139.1| mKIAA0086 protein [Mus musculus]
Length = 984
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 147/324 (45%), Gaps = 64/324 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + R P++CS +T L K + IR L + +
Sbjct: 667 EGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEITGNLLKKKL-RVQEQYIRQLPMDTECV 724
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
+ V+V+ +DANHCPG + M+LF+ G +L+TGDFR + S ER+
Sbjct: 725 VDS----------VKVVLLDANHCPG----ATMILFQLPNGAVILHTGDFRADPSMERSR 770
Query: 132 I-GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL--- 179
+ GR V L+LD TYC+ Y FPS++ A + + + P L
Sbjct: 771 LAGRK----------VHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVC 820
Query: 180 ------QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIG 224
+ L D+ +K +++ + +P S + D +SL + P +
Sbjct: 821 GTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVHLLPMMQ 880
Query: 225 IMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYS 282
I GL +K K GG L +R TG T + + + R + IY
Sbjct: 881 INFKGLQSHLK--KCGGKYDQIL------AFRPTGWTHSNNITSTADIIPQTRGNISIYG 932
Query: 283 VPYSDHSCFTEIEEFLNLVQPSNI 306
+PYS+HS + E++ F+ ++P I
Sbjct: 933 IPYSEHSSYLEMKRFVQWLKPQKI 956
>gi|117306469|gb|AAI25278.1| Dclre1b protein [Mus musculus]
Length = 459
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 109/271 (40%), Gaps = 89/271 (32%)
Query: 81 GEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA 140
G++T V IDANHCPG SVM LF G FG +LYTGDFR+ S + L+
Sbjct: 4 GQETMT-VTLIDANHCPG----SVMFLFEGYFGTILYTGDFRYTPSM----LKEPALILG 54
Query: 141 LKDDVVDILYLDNTYCNSSYAFPSREVAAQQI---------------------------- 172
+ + LYLDNT CN + PSR+ A QQI
Sbjct: 55 KQ---IHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQHNIKIGLYSLGKESLLEQL 111
Query: 173 ------WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIG 224
WV P+RL+ + LLG D+FT + R+ AV + N HPTI
Sbjct: 112 ALEFRTWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDHTEICHSAMLQWNQSHPTIA 171
Query: 225 IMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVP 284
I P+ K R+ H IY+VP
Sbjct: 172 IFPTS-----------------------RKVRSP------------------HPSIYTVP 190
Query: 285 YSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
YSDHS ++E+ F+ ++P + IV C
Sbjct: 191 YSDHSSYSELRAFVAALRPCQVVPIVHQKPC 221
>gi|347543745|ref|NP_061301.3| DNA cross-link repair 1A protein [Mus musculus]
Length = 1047
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 150/332 (45%), Gaps = 64/332 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + R P++CS +T L K + IR L + +
Sbjct: 730 EGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEITGNLLKKKL-RVQEQYIRQLPMDTECV 787
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
+ V+V+ +DANHCPG + M+LF+ G +L+TGDFR + S ER+
Sbjct: 788 VDS----------VKVVLLDANHCPG----ATMILFQLPNGAVILHTGDFRADPSMERSR 833
Query: 132 I-GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL--- 179
+ GR V L+LD TYC+ Y FPS++ A + + + P L
Sbjct: 834 LAGRK----------VHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVC 883
Query: 180 ------QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIG 224
+ L D+ +K +++ + +P S + D +SL + P +
Sbjct: 884 GTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVHLLPMMQ 943
Query: 225 IMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYS 282
I GL +K K GG L +R TG T + + + R + IY
Sbjct: 944 INFKGLQSHLK--KCGGKYDQIL------AFRPTGWTHSNNITSTADIIPQTRGNISIYG 995
Query: 283 VPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
+PYS+HS + E++ F+ ++P I V+ S
Sbjct: 996 IPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGS 1027
>gi|73620752|sp|Q9JIC3.2|DCR1A_MOUSE RecName: Full=DNA cross-link repair 1A protein; AltName: Full=SNM1
homolog A
Length = 1026
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 147/324 (45%), Gaps = 64/324 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + R P++CS +T L K + IR L + +
Sbjct: 709 EGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEITGNLLKKKL-RVQEQYIRQLPMDTECV 766
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
+ V+V+ +DANHCPG + M+LF+ G +L+TGDFR + S ER+
Sbjct: 767 VDS----------VKVVLLDANHCPG----ATMILFQLPNGAVILHTGDFRADPSMERSR 812
Query: 132 I-GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL--- 179
+ GR V L+LD TYC+ Y FPS++ A + + + P L
Sbjct: 813 LAGRK----------VHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVC 862
Query: 180 ------QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIG 224
+ L D+ +K +++ + +P S + D +SL + P +
Sbjct: 863 GTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVHLLPMMQ 922
Query: 225 IMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYS 282
I GL +K K GG L +R TG T + + + R + IY
Sbjct: 923 INFKGLQSHLK--KCGGKYDQIL------AFRPTGWTHSNNITSTADIIPQTRGNISIYG 974
Query: 283 VPYSDHSCFTEIEEFLNLVQPSNI 306
+PYS+HS + E++ F+ ++P I
Sbjct: 975 IPYSEHSSYLEMKRFVQWLKPQKI 998
>gi|168035028|ref|XP_001770013.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678734|gb|EDQ65189.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 530
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 148/324 (45%), Gaps = 53/324 (16%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H+DH QGL+ + G +FCS +TA+L L+ G+ L I+ L + I
Sbjct: 217 WFLTHFHTDHYQGLTRGFRHGKIFCSSITARLISLRI-GVPLDRIQALPLNETVLID--- 272
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
V V IDANHCPG SVM+LF G +L+TGDFR+ +++ N
Sbjct: 273 -------GVRVTFIDANHCPG----SVMILFEPPNGEVVLHTGDFRY-----YSDMASND 316
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ----QIWVWPERLQTMHLLGFHDIFT 192
+++ + + L LD TYC+ + FP ++ Q I +T+ L+G + I
Sbjct: 317 VLRKCR---ITTLILDTTYCDPQHDFPKQDSVIQFVIDAIQAEAFNPKTLFLIGTYTIGK 373
Query: 193 TKTSLTRVRAVPRYSF----------SIDTLE------SLNTMHPTIGIMPSGLPWVVKP 236
K L +A+ +Y + +D E + I ++P W V
Sbjct: 374 EKLFLEVGKALQKYVYVGSAKQRLLDCMDLTEEDKRWLTTKDQESHIHVVPL---WSVAS 430
Query: 237 LKGGGSLPGSLFSSYQS--KWRATGGTQTEKLKEALGSVDRFHK----YIYSVPYSDHSC 290
K GS+ Y S + TG + + K G R ++ Y VPYS+HS
Sbjct: 431 FKRMGSISRHYHGRYDSIVAFSPTGCSFGKDKKRVQGRPGRRYQQGSIIRYEVPYSEHSS 490
Query: 291 FTEIEEFLNLVQPSNIRGIVSSSS 314
FTE++EF+ + NI V SS+
Sbjct: 491 FTELKEFVRFIGSENIIPSVISST 514
>gi|148669815|gb|EDL01762.1| DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae), isoform CRA_b
[Mus musculus]
Length = 1029
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 147/324 (45%), Gaps = 64/324 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + R P++CS +T L K + IR L + +
Sbjct: 712 EGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEITGNLLKKKL-RVQEQYIRQLPMDTECV 769
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
+ V+V+ +DANHCPG + M+LF+ G +L+TGDFR + S ER+
Sbjct: 770 VDS----------VKVVLLDANHCPG----ATMILFQLPNGAVILHTGDFRADPSMERSR 815
Query: 132 I-GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL--- 179
+ GR V L+LD TYC+ Y FPS++ A + + + P L
Sbjct: 816 LAGRK----------VHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVC 865
Query: 180 ------QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIG 224
+ L D+ +K +++ + +P S + D +SL + P +
Sbjct: 866 GTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVHLLPMMQ 925
Query: 225 IMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYS 282
I GL +K K GG L +R TG T + + + R + IY
Sbjct: 926 INFKGLQSHLK--KCGGKYDQIL------AFRPTGWTHSNNITSTADIIPQTRGNISIYG 977
Query: 283 VPYSDHSCFTEIEEFLNLVQPSNI 306
+PYS+HS + E++ F+ ++P I
Sbjct: 978 IPYSEHSSYLEMKRFVQWLKPQKI 1001
>gi|343959632|dbj|BAK63673.1| DNA cross-link repair 1A protein [Pan troglodytes]
Length = 576
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 145/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 259 EGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKL-HVQEQYIHPLPLDTECI 316
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
++ V+V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 317 VN----------GVKVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMERS- 361
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 362 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCG 413
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K ++R + +P + + D SL + P + I
Sbjct: 414 TYSIGKEKVFLAIADVLGSKVGMSREKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQI 473
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 474 NFKGLQSHLK--KCGGKYNQIL------AFRPTGWTHSNKFTRIADVIPQTKGNISIYGI 525
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 526 PYSEHSSYLEMKRFVQWLKPQKI 548
>gi|15029751|gb|AAH11094.1| Dclre1b protein [Mus musculus]
gi|74210373|dbj|BAE23379.1| unnamed protein product [Mus musculus]
Length = 452
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 105/264 (39%), Gaps = 88/264 (33%)
Query: 88 VIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVD 147
V IDANHCPG SVM LF G FG +LYTGDFR+ S + L+ + +
Sbjct: 3 VTLIDANHCPG----SVMFLFEGYFGTILYTGDFRYTPSM----LKEPALILGKQ---IH 51
Query: 148 ILYLDNTYCNSSYAFPSREVAAQQI----------------------------------W 173
LYLDNT CN + PSR+ A QQI W
Sbjct: 52 TLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQHNIKIGLYSLGKESLLEQLALEFRTW 111
Query: 174 VW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLP 231
V P+RL+ + LLG D+FT + R+ AV + N HPTI I P+
Sbjct: 112 VVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDHTEICHSAMLQWNQSHPTIAIFPTS-- 169
Query: 232 WVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCF 291
K R+ H IY+VPYSDHS +
Sbjct: 170 ---------------------RKVRSP------------------HPSIYTVPYSDHSSY 190
Query: 292 TEIEEFLNLVQPSNIRGIVSSSSC 315
+E+ F+ ++P + IV C
Sbjct: 191 SELRAFVAALRPCQVVPIVHQKPC 214
>gi|224131352|ref|XP_002321063.1| predicted protein [Populus trichocarpa]
gi|222861836|gb|EEE99378.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 147/315 (46%), Gaps = 45/315 (14%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G YFLTH H DH GL+ W+ GP++C+ LTA+L + L+ I L++ + + I
Sbjct: 66 GCSAYFLTHFHYDHYGGLTKGWSHGPIYCTPLTARLLTICL-SLNSLYIHPLELDTEYVI 124
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEI 132
V+V ++ANHCPG + +L FR G C L+TGDFR + +
Sbjct: 125 QG----------VKVTLLEANHCPG----AALLHFRLPTGLCYLHTGDFRASKLMQAHPL 170
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE-VAAQQIWVWPERL----QTMHLLGF 187
L ++ V++LYLD TYCN Y FPS+E V + + V L +T+ ++G
Sbjct: 171 --------LANNRVNVLYLDTTYCNPKYKFPSKEDVLSYVVRVTKSSLKKQPKTLVVVGA 222
Query: 188 HDIFTTKTSLTRVRAVPRYSFSIDT----LESL-------NTMHPTIGIMPSGLPWVVKP 236
+ I L +A+ ++ ++ L+S N I LP
Sbjct: 223 YSIGKESVYLAISKALGVKIYANNSRRRILQSFGWPDLSTNLCTKAIDTCLHVLPISSLR 282
Query: 237 LKGGGSLPGSLFSSYQS--KWRATGGTQTEKLKEALGSV---DRFHKYIYSVPYSDHSCF 291
+ + + Y + +R TG T +E L L + R + IY VPYS+HS F
Sbjct: 283 YETLKDYLKNHVNQYAAVLAFRPTGWTYSEGLGRELDLIRPSTRGNITIYGVPYSEHSSF 342
Query: 292 TEIEEFLNLVQPSNI 306
TE+ +F+ ++P I
Sbjct: 343 TELRDFVEFLKPDKI 357
>gi|426253134|ref|XP_004020255.1| PREDICTED: DNA cross-link repair 1A protein [Ovis aries]
Length = 1051
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 153/331 (46%), Gaps = 64/331 (19%)
Query: 11 WTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
W EG YFLTH HSDH GLS P++CS +T L K + I L I +
Sbjct: 732 WVEGCTAYFLTHFHSDHYAGLSKN-CMFPIYCSEITGNLLKSKL-HVQEQYIHPLPIDTE 789
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNER 129
++ ++VI ++ANHCPG +VM+LF G +L+TGDFR + S ER
Sbjct: 790 CIVNG----------IKVILLEANHCPG----AVMILFYLPNGHVILHTGDFRADPSMER 835
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL-- 179
+ L+ K V LYLD TYC+ Y+FPS++ A + + + P+ L
Sbjct: 836 S------LLACQK---VHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFETVTLNPQALVV 886
Query: 180 -------QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTI 223
+ L D+ +K +++ + +P S + D +SL + P +
Sbjct: 887 CGTYSIGKEKIFLAIADVLGSKVGMSKEKYNTLQCFNIPEVSSLITTDMCKSLVHLLPMM 946
Query: 224 GIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV---DRFHKYI 280
I GL +K K GG L +R TG T + KL +L + + + I
Sbjct: 947 QINFKGLQNHLK--KCGGKYNQIL------AFRPTGWTHSNKLT-SLADIIPQTKGNISI 997
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIRGIVS 311
Y +PYS+HS + E++ F+ ++P I V+
Sbjct: 998 YGIPYSEHSSYLEMKRFVQWLKPQKIIPTVN 1028
>gi|225431465|ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
Length = 552
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 162/357 (45%), Gaps = 44/357 (12%)
Query: 1 MEKGL-ISVDRWTEGSQV---YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M +GL SVD WT S+ +FLTH H DH+ G+S+ A P++ + LT L ++P
Sbjct: 5 MPRGLPFSVDTWTPSSKKKRHHFLTHAHKDHSSGISTHSAY-PIYSTHLTKTLILQQYPQ 63
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
LD SL +++G S+ V P V A DANHCPG +VM LF GDFG +L
Sbjct: 64 LDDSLFVGIEVG--QSMVVDDPDGR----FGVTAFDANHCPG----AVMFLFEGDFGNIL 113
Query: 117 YTGDFRWEASNERAEIGRNTLVKALKDDVV--DILYLDNTYCNSSYAFPSREVAAQQ--- 171
+TGD R + + + K K+ D ++LD T+ SS PS+ +A QQ
Sbjct: 114 HTGDCRL-IPECLQNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVIN 172
Query: 172 -IWVWPER---LQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTI-GIM 226
IW P+ +LG +I + + + + + + ++L M P I
Sbjct: 173 CIWKHPDAPIVYLCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMVPEILSQD 232
Query: 227 PS-------GLPWVVKPLKG------GGSLPGSLFSSYQSKWRATGGT--QTE-KLKEAL 270
PS G P + + + SLP L ++W A +TE + KE+
Sbjct: 233 PSSRFQVFEGFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTERRKKESF 292
Query: 271 GSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
R I+ V YS HS E+E L L+ P R + ++ SC L Y + C
Sbjct: 293 NEAVRDQFGIWHVCYSIHSSRQELEWALQLLAPK--RVVSTTPSCRAMELNYVKKHC 347
>gi|397510540|ref|XP_003825653.1| PREDICTED: DNA cross-link repair 1A protein [Pan paniscus]
Length = 1040
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 145/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 723 EGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKL-HVQEQYIHPLPLDTECI 780
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V +V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 781 VNGV----------KVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMERS- 825
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 826 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCG 877
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K ++R + +P + + D SL + P + I
Sbjct: 878 TYSIGKEKVFLAIADVLGSKVGMSREKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQI 937
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 938 NFKGLQSHLK--KCGGKYNQIL------AFRPTGWTHSNKFTRIADVIPQTKGNISIYGI 989
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 990 PYSEHSSYLEMKRFVQWLKPQKI 1012
>gi|114632910|ref|XP_508045.2| PREDICTED: DNA cross-link repair 1A protein [Pan troglodytes]
gi|410337131|gb|JAA37512.1| DNA cross-link repair 1A [Pan troglodytes]
Length = 1040
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 145/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 723 EGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKL-HVQEQYIHPLPLDTECI 780
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V +V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 781 VNGV----------KVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMERS- 825
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 826 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCG 877
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K ++R + +P + + D SL + P + I
Sbjct: 878 TYSIGKEKVFLAIADVLGSKVGMSREKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQI 937
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 938 NFKGLQSHLK--KCGGKYNQIL------AFRPTGWTHSNKFTRIADVIPQTKGNISIYGI 989
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 990 PYSEHSSYLEMKRFVQWLKPQKI 1012
>gi|297828291|ref|XP_002882028.1| sterile alpha motif domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327867|gb|EFH58287.1| sterile alpha motif domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 92/333 (27%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ +++ G ++CS +TAKL +K G+ ++VLD+G +I+
Sbjct: 416 WFLTHFHLDHYQGLTKSFSHGKIYCSLVTAKLVNMKI-GIPWERLQVLDLGQKVNIA--- 471
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
++V DANHCPG S+M+LF G +L+TGDFR+ IG
Sbjct: 472 -------GIDVTCFDANHCPG----SIMILFEPTNGKAVLHTGDFRYSEEMSDWLIGSQ- 519
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ-------------------------- 170
++ L LD TYCN Y FP +E Q
Sbjct: 520 ---------INSLILDTTYCNPQYDFPKQEAVIQFVVEAIQAEAFNPKTLFLIGSYTIGK 570
Query: 171 -------------QIWVWPERLQTMHLLGF--HDI--FTTKTSLTRVRAVPRYSFSIDTL 213
+I++ P +L+ + LGF D+ FT K + + VP + TL
Sbjct: 571 ERLFLEVARVLREKIYINPSKLKLLECLGFSKEDMQWFTVKEEESHIHVVPLW-----TL 625
Query: 214 ESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV 273
S + + +V G ++S ++K ++ G +L++ G++
Sbjct: 626 ASFKRLKHIANRYTNRYSLIVTFSPTG-------WTSSKTKKKSPG----RRLQQ--GTI 672
Query: 274 DRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
R Y VPYS+HS FTE++EF+ P I
Sbjct: 673 IR-----YEVPYSEHSSFTELKEFVQKASPEVI 700
>gi|255550227|ref|XP_002516164.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
gi|223544650|gb|EEF46166.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
Length = 737
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 143/311 (45%), Gaps = 46/311 (14%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G ++CS +TA+L +K G+ ++VL + SI+
Sbjct: 430 WFLTHFHMDHYQGLTRSFCHGKIYCSLITARLVNMKI-GIPWDRLQVLPLNKKISIA--- 485
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
V+V +DANHCPG S+++LF G +L+TGDFR+
Sbjct: 486 -------GVDVTCLDANHCPG----SIIVLFEPPNGKAVLHTGDFRF--------CENMA 526
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ----QIWVWPERLQTMHLLGFHDIFT 192
+ AL+ + L LD TYCN Y FP +E Q I +T+ L+G + I
Sbjct: 527 SMTALQMCRIHTLILDTTYCNPQYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK 586
Query: 193 TKTSLTRVRAVPR--------------YSFSIDTLE--SLNTMHPTIGIMPSGLPWVVKP 236
+ L R + R FS + ++ +LN I ++P K
Sbjct: 587 ERLFLEVARVLRRKVYVTAAKFRLLESLGFSKEAMQWFTLNEHESQIHVVPMWTLASFKR 646
Query: 237 LKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYI-YSVPYSDHSCFTEIE 295
LK + S FS S + TG T + K++ G + I Y VPYS+H FTE+
Sbjct: 647 LKHISNQYASRFSPIVS-FSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELR 705
Query: 296 EFLNLVQPSNI 306
EF+ V P I
Sbjct: 706 EFVKFVSPEKI 716
>gi|237838189|ref|XP_002368392.1| DNA cross-link repair protein, putative [Toxoplasma gondii ME49]
gi|211966056|gb|EEB01252.1| DNA cross-link repair protein, putative [Toxoplasma gondii ME49]
gi|221484335|gb|EEE22631.1| SNM1 protein, putative [Toxoplasma gondii GT1]
gi|221505686|gb|EEE31331.1| SNM1 protein, putative [Toxoplasma gondii VEG]
Length = 404
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 170/379 (44%), Gaps = 73/379 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+GS V+FL+H H+DH GLSS+W+RG ++CS LTA+L + F ++ +L+R LD+ + +
Sbjct: 33 KGSFVFFLSHFHADHYSGLSSSWSRGVVYCSVLTARLI-ITFLRVNKALVRGLDLDTEYE 91
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
I+ V +DANHCPG +VM L + G L+TGDFR+ +R
Sbjct: 92 IAD----------ARVTLLDANHCPG----AVMFLCKTKGGKTYLHTGDFRY----DRHM 133
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAF-PSREVAAQQIWVWPERLQ-------TMH 183
+ AL + +D ++LD TY Y F P + + + V E + +
Sbjct: 134 VDH----PALANCHIDTVFLDTTYGRPEYEFEPQVDTIQRAVNVAEEVCKESKQPGRVLF 189
Query: 184 LLGFHDIFTTKTSLT-------RVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKP 236
L+G + I K +L V A + +D L+ +G P+ + P
Sbjct: 190 LVGSYTIGKEKIALALSETFGWTVFASGKRRRILDCLQLEQLRDGGLGDDPATCCIHIVP 249
Query: 237 LKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEE 296
+ LP S+ SKW E + G + ++ + YS+HS +TE++E
Sbjct: 250 MNTIAFLPTGW--SFTSKW------NKEHSSMSSGCIT-----VHLLEYSEHSSYTELKE 296
Query: 297 FLNLVQPSNIRGIVSSSSCYVDPLYYFGRLCRANQPPLRYKQEKRVQHKTVVAAQIKFNV 356
F+N ++P+ + V S+ F RL R QP T A ++
Sbjct: 297 FVNHLRPNQVIPTVYSNQ------KDFCRLLRDMQP------------TTKAEASRGAHI 338
Query: 357 ESGRSAKVDRKRRRTAEVG 375
G S RKR RT E G
Sbjct: 339 SQGNSG---RKRTRTRETG 354
>gi|224092047|ref|XP_002309453.1| predicted protein [Populus trichocarpa]
gi|222855429|gb|EEE92976.1| predicted protein [Populus trichocarpa]
Length = 740
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 141/311 (45%), Gaps = 46/311 (14%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G ++CS +TAKL LK G+ + VL + I+ V
Sbjct: 433 WFLTHFHMDHYQGLTRSFCHGKIYCSLITAKLVNLKI-GIPWDSLHVLPLNQKICIAGV- 490
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
+V +DANHCPG S+++LF G +L+TGDFR+ +
Sbjct: 491 ---------DVTCLDANHCPG----SIIILFEPPNGKAVLHTGDFRFSE--------KMV 529
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ----QIWVWPERLQTMHLLGFHDIFT 192
+ L+ + L LD TYCN+ Y FP +E Q I +T+ L+G + I
Sbjct: 530 TMPVLQMSSIHTLILDTTYCNAQYDFPKQEAVIQFVIEAIQAEAFNPKTLFLIGSYTIGK 589
Query: 193 TK--------------TSLTRVRAVPRYSFSIDTLE--SLNTMHPTIGIMPSGLPWVVKP 236
+ ++ + R + F + + +LN I ++P K
Sbjct: 590 ERLFLEVARVLHKKVYVNMAKFRLLECLGFPEEDMRWITLNEQESHIHVVPMWTLASFKR 649
Query: 237 LKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYI-YSVPYSDHSCFTEIE 295
LK S F+ + + TG T + K++ G + I Y VPYS+H FTE+
Sbjct: 650 LKHLSSQYAGRFTLIVA-FSPTGWTFGKGKKKSPGRRCQQGTIIRYEVPYSEHCSFTELR 708
Query: 296 EFLNLVQPSNI 306
EF+ V P NI
Sbjct: 709 EFVKFVSPENI 719
>gi|321476964|gb|EFX87923.1| hypothetical protein DAPPUDRAFT_41973 [Daphnia pulex]
Length = 350
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 140/327 (42%), Gaps = 50/327 (15%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G YFL+H H DH +GL W PL+CS++TA L LK L ++RVL + I
Sbjct: 29 GVSSYFLSHYHYDHYRGLGK-WLDKPLYCSQVTANLINLKI-KLKPGIVRVLPLNESRVI 86
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEI 132
+ EVI IDANHCPG SVM LFR G +L+ GDFR S ER
Sbjct: 87 ESI----------EVILIDANHCPG----SVMFLFRFPTGKVVLHVGDFRAHPSMER--- 129
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPER--LQTMHLLGFHDI 190
+ LK +D LYLD TYC+ Y P++E I R L+ LL
Sbjct: 130 -----LYELKQRPIDELYLDTTYCDEHYELPAQEEVLSYIRRLVRRYALKYQKLLVICGT 184
Query: 191 FTTKTSLTRVRAVPRYSFSI-------DTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSL 243
+T + A + + L L+ + + S L V + G
Sbjct: 185 YTIGKEKVFMMAAEELNSKVWAPTEKRRILNCLDDSKISSRLATSPLEASVHVVNMGDVK 244
Query: 244 PGSLFSSYQS--------------KWRATGGTQTEKLKEALGSVDRFHK-YIYSVPYSDH 288
P +L + S W G + L +A+ ++ +I+ VPYS+H
Sbjct: 245 PANLKNYLDSLSGSFTHILALNPTGWEYDGKMAAKGL-DAISPKSYYNSIFIHGVPYSEH 303
Query: 289 SCFTEIEEFLNLVQPSNIRGIVSSSSC 315
S F+E++ F+ +P I V+ +S
Sbjct: 304 SGFSEMKRFVRFFRPRKIIPTVNVASA 330
>gi|296088547|emb|CBI37538.3| unnamed protein product [Vitis vinifera]
Length = 558
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 162/357 (45%), Gaps = 44/357 (12%)
Query: 1 MEKGL-ISVDRWTEGSQV---YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M +GL SVD WT S+ +FLTH H DH+ G+S+ A P++ + LT L ++P
Sbjct: 39 MPRGLPFSVDTWTPSSKKKRHHFLTHAHKDHSSGISTHSAY-PIYSTHLTKTLILQQYPQ 97
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
LD SL +++G S+ V P V A DANHCPG +VM LF GDFG +L
Sbjct: 98 LDDSLFVGIEVG--QSMVVDDPDGR----FGVTAFDANHCPG----AVMFLFEGDFGNIL 147
Query: 117 YTGDFRWEASNERAEIGRNTLVKALKDDVV--DILYLDNTYCNSSYAFPSREVAAQQ--- 171
+TGD R + + + K K+ D ++LD T+ SS PS+ +A QQ
Sbjct: 148 HTGDCRL-IPECLQNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVIN 206
Query: 172 -IWVWPER---LQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTI-GIM 226
IW P+ +LG +I + + + + + + ++L M P I
Sbjct: 207 CIWKHPDAPIVYLCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMVPEILSQD 266
Query: 227 PS-------GLPWVVKPLKG------GGSLPGSLFSSYQSKWRATGG--TQTE-KLKEAL 270
PS G P + + + SLP L ++W A +TE + KE+
Sbjct: 267 PSSRFQVFEGFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTERRKKESF 326
Query: 271 GSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
R I+ V YS HS E+E L L+ P R + ++ SC L Y + C
Sbjct: 327 NEAVRDQFGIWHVCYSIHSSRQELEWALQLLAPK--RVVSTTPSCRAMELNYVKKHC 381
>gi|126273412|ref|XP_001377744.1| PREDICTED: DNA cross-link repair 1A protein [Monodelphis domestica]
Length = 1043
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 150/322 (46%), Gaps = 49/322 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS++T+ L K + + L +
Sbjct: 725 EGCTAYFLTHFHSDHYAGLSKKFT-FPVYCSKITSNLVKSKLCVQE----QYLHPLPMDT 779
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
+ +V+ ++V+ +DANHCPG +VM+LF G +L+TGDFR + S ER
Sbjct: 780 VCIVND-------IKVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMERYS 828
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
+ L + V LYLD TYC+ Y FPS++ +A + + + P L
Sbjct: 829 L--------LANQKVHTLYLDTTYCSPEYTFPSQQEVIQFAINIAFESVTLAPRTLVVCG 880
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMH---PTIGIMPSGLP 231
+ L D+ +K S+++ + + + SL T + ++P +
Sbjct: 881 TYAIGKEKVFLAIADVLGSKVSMSQEKYKTLKCLELQEVNSLITTDWNSALVHLLPM-MQ 939
Query: 232 WVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSVPYSDHS 289
K L+ + G + + +R TG T +EK V + + IY +PYS+HS
Sbjct: 940 INFKDLQNHLNKCGGKYDCILA-FRPTGWTHSEKFDSITDIVPQTKGNISIYGIPYSEHS 998
Query: 290 CFTEIEEFLNLVQPSNIRGIVS 311
+ E++ F+ ++P I V+
Sbjct: 999 SYVEMKRFVQWLKPQKIISTVN 1020
>gi|332212859|ref|XP_003255538.1| PREDICTED: DNA cross-link repair 1A protein [Nomascus leucogenys]
Length = 1040
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 145/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 723 EGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKL-HVQEQYIHPLPLDTECI 780
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
++ V +V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 781 VNGV----------KVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMERS- 825
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 826 --------LLADQKVHVLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCG 877
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ + +P + + D SL + P + I
Sbjct: 878 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSVITTDMCSSLVHLLPMMQI 937
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 938 NFKGLQSHLK--KCGGKYNQIL------AFRPTGWTHSNKFTRIADVIPQTKGNISIYGI 989
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 990 PYSEHSSYLEMKHFVQWLKPQKI 1012
>gi|194205654|ref|XP_001495731.2| PREDICTED: DNA cross-link repair 1A protein [Equus caballus]
Length = 1043
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 145/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 726 EGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEITGNLLKCKL-HVQEQYIHPLPMDTGCI 783
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
++ V+V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 784 VN----------GVKVVFLDANHCPG----AVMILFYLPNGNVMLHTGDFRADPSMERS- 828
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L V LYLD TYC+ Y+FPS++ A + + + P L
Sbjct: 829 --------LLASQRVHTLYLDTTYCSPEYSFPSQQEVIQFVINTAFEAVTLNPCTLVVCG 880
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ + +P + + D SL + P + I
Sbjct: 881 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCNSLVHLLPMMQI 940
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRF--HKYIYSV 283
GL +K K GG L +R TG T + KL + R + IY V
Sbjct: 941 NFKGLQSHLK--KCGGKYDRIL------AFRPTGWTHSNKLTSIADVLPRTKGNISIYGV 992
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS F E++ F+ ++P I
Sbjct: 993 PYSEHSSFLEMKRFVQWLKPQKI 1015
>gi|356518191|ref|XP_003527765.1| PREDICTED: DNA cross-link repair protein SNM1-like [Glycine max]
Length = 678
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 146/313 (46%), Gaps = 50/313 (15%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G ++CS +TA+L + G+ + VL + I+
Sbjct: 371 WFLTHFHLDHYQGLTKSFNHGKIYCSSVTARLVNMNI-GIPYDKLHVLPLNQKVEIA--- 426
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
V+V +DANHCPG S+++LF+ G +L+TGDFR+ E+ N
Sbjct: 427 -------GVDVTCLDANHCPG----SIIILFQPPNGKAVLHTGDFRFS-----EEMAVNP 470
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--WVWPERL--QTMHLLGFHDIFT 192
L++ ++ L LD TYCN Y FP +E Q + V E +T+ L+G + I
Sbjct: 471 LMRICP---INTLILDTTYCNPQYDFPKQESVIQFVIDAVQAETFNPKTLFLIGSYTIGK 527
Query: 193 TKTSLTRVRAVPR----YSFSIDTLESL------------NTMHPTIGIMPSGLPWVVKP 236
+ L R++ + + + L+ L N I + P W +
Sbjct: 528 ERLFLEVARSLRKKVHVTAAKLRILKCLELKEEDMQWFTSNEHESNIHVAPM---WTLAS 584
Query: 237 LKGGGSLPGSLFSSYQ--SKWRATGGTQTEKLKEALGSVDRFHKYI-YSVPYSDHSCFTE 293
K + S Y + TG T + K++ G + I Y VPYS+HS FTE
Sbjct: 585 FKRLKHISSQYKSQYNLIVAFSPTGWTFGKGKKKSTGRRWQQGTIIRYEVPYSEHSSFTE 644
Query: 294 IEEFLNLVQPSNI 306
++EF+ +V P NI
Sbjct: 645 LKEFVRVVSPDNI 657
>gi|146182956|ref|XP_001025657.2| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|146143674|gb|EAS05412.2| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 1701
Score = 107 bits (268), Expect = 8e-21, Method: Composition-based stats.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 28/182 (15%)
Query: 6 ISVDRWTEGSQ------VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDL 59
I VD ++ G + +YFLTH+HSDH QG++ W G ++CS +T KL KFP L
Sbjct: 9 IVVDEFSYGKRHPLKKYIYFLTHMHSDHYQGITPNWNFGTIYCSEVTKKLLLNKFP--QL 66
Query: 60 SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTG 119
+R L++ I + + K + V DANHCPG SVM +F G FG +L+TG
Sbjct: 67 QDVRELEMNKQQKICL---NQENKIEINVYLFDANHCPG----SVMFMFEGYFGRILHTG 119
Query: 120 DFRWEASNERAEIG---------RNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
D R+ NE RN+ +K + + + ++ DNTYC+ + FP RE A Q
Sbjct: 120 DMRF---NENLIYNNPILYPIEKRNSELKKISLQIDECIF-DNTYCDPIFKFPKREKACQ 175
Query: 171 QI 172
+
Sbjct: 176 ML 177
>gi|47060293|gb|AAT09762.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Homo sapiens]
gi|119569874|gb|EAW49489.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae), isoform CRA_a
[Homo sapiens]
gi|119569875|gb|EAW49490.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae), isoform CRA_a
[Homo sapiens]
Length = 1040
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 145/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 723 EGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKL-HVQEQYIHPLPLDTECI 780
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V +V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 781 VNGV----------KVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMERS- 825
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 826 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCG 877
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ + +P + + D SL + P + I
Sbjct: 878 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQI 937
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 938 NFKGLQSHLK--KCGGKYNQIL------AFRPTGWTHSNKFTRIADVIPQTKGNISIYGI 989
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 990 PYSEHSSYLEMKRFVQWLKPQKI 1012
>gi|38566205|gb|AAH62582.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Homo sapiens]
Length = 1040
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 145/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 723 EGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKL-HVQEQYIHPLPLDTECI 780
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V +V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 781 VNGV----------KVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMERS- 825
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 826 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCG 877
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ + +P + + D SL + P + I
Sbjct: 878 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQI 937
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 938 NFKGLQSHLK--KCGGKYNQIL------AFRPTGWTHSNKFTRIADVIPQTKGNISIYGI 989
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 990 PYSEHSSYLEMKRFVQWLKPQKI 1012
>gi|223278374|ref|NP_055696.3| DNA cross-link repair 1A protein [Homo sapiens]
gi|425871110|ref|NP_001258745.1| DNA cross-link repair 1A protein [Homo sapiens]
gi|311033461|sp|Q6PJP8.3|DCR1A_HUMAN RecName: Full=DNA cross-link repair 1A protein; AltName: Full=SNM1
homolog A; Short=hSNM1; Short=hSNM1A
gi|16753254|gb|AAH13124.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Homo sapiens]
gi|168274358|dbj|BAG09599.1| DNA cross-link repair 1A protein [synthetic construct]
Length = 1040
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 145/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 723 EGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKL-HVQEQYIHPLPLDTECI 780
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V +V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 781 VNGV----------KVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMERS- 825
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 826 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCG 877
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ + +P + + D SL + P + I
Sbjct: 878 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQI 937
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 938 NFKGLQSHLK--KCGGKYNQIL------AFRPTGWTHSNKFTRIADVIPQTKGNISIYGI 989
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 990 PYSEHSSYLEMKRFVQWLKPQKI 1012
>gi|393911301|gb|EFO27761.2| DNA ligase I [Loa loa]
Length = 500
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 33/184 (17%)
Query: 3 KGLISVDRWTEGSQV--YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPL-------K 53
G I+VD++ + + + YFLTH HSDH + + W GP++CS +TA + P+ K
Sbjct: 9 NGFIAVDKFPKDAAIKYYFLTHAHSDHYAAVDNKWNNGPIYCSPVTAHILPIVTHRPRSK 68
Query: 54 FPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGD-- 111
G+ LI LD+ WH + S V+ +DANH PG SVM LF GD
Sbjct: 69 RAGIRSHLIHALDLNVWHHMDGFS----------VMLLDANHVPG----SVMFLFEGDKI 114
Query: 112 -FGCLLYTGDFRWEASNERAEIGRNTL-VKALKDDVVDILYLDNTYCNSS-YAFPSREVA 168
G +L+TGDFR + + +N V L++ + +YLD TY N + FPSREV+
Sbjct: 115 SEGPILFTGDFRAD-----IRLYQNIFAVSVLRERSLSTIYLDTTYINCTREEFPSREVS 169
Query: 169 AQQI 172
+ +I
Sbjct: 170 SAEI 173
>gi|40788960|dbj|BAA07646.2| KIAA0086 [Homo sapiens]
Length = 1044
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 145/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 727 EGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKL-HVQEQYIHPLPLDTECI 784
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V +V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 785 VNGV----------KVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMERS- 829
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 830 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCG 881
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ + +P + + D SL + P + I
Sbjct: 882 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQI 941
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 942 NFKGLQSHLK--KCGGKYNQIL------AFRPTGWTHSNKFTRIADVIPQTKGNISIYGI 993
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 994 PYSEHSSYLEMKRFVQWLKPQKI 1016
>gi|297687406|ref|XP_002821207.1| PREDICTED: DNA cross-link repair 1A protein [Pongo abelii]
Length = 1039
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 147/328 (44%), Gaps = 62/328 (18%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 722 EGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKL-HVQEQYIHPLPLDTECI 779
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V +V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 780 VNGV----------KVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMERS- 824
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 825 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCG 876
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ + +P + + D SL + P + I
Sbjct: 877 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQI 936
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 937 NFKGLQSHLK--KCGGKYNQIL------AFRPTGWTHSNKFTRIADVIPQTKGNISIYGI 988
Query: 284 PYSDHSCFTEIEEFLNLVQPSNIRGIVS 311
PYS+HS + E++ F+ ++P I V+
Sbjct: 989 PYSEHSSYLEMKRFVQWLKPQKIIPTVN 1016
>gi|296081740|emb|CBI20745.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 141/315 (44%), Gaps = 54/315 (17%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G ++CS +TA+L +K G+ +++L + +I
Sbjct: 416 WFLTHFHLDHYQGLTRSFCHGKIYCSAITARLVNMKI-GIPWDRLQILPLNQKINID--- 471
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
V+V +DANHCPG S+++LF G +L+TGDFR+ T
Sbjct: 472 -------GVDVTCLDANHCPG----SIIILFEPSNGKAVLHTGDFRFSEE--------MT 512
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ----QIWVWPERLQTMHLLGFHDIFT 192
+ L+ + L LD TYCN Y FP +E Q I +T+ L+G + I
Sbjct: 513 SMSVLQMCPIHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFNPRTLFLIGSYTIGK 572
Query: 193 TKTSLTRVRAVPRYSFS-------IDTLE---------SLNTMHPTIGIMPSGLPWVVKP 236
+ L R + + + ++ LE +LN I ++P K
Sbjct: 573 ERLFLEVARVLRKKVYVNAAKLHILECLEFQKEDMQWFTLNEQESHIHVVPMWTLASFKR 632
Query: 237 LKGGGSLPGSLFSSY----QSKWR-ATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCF 291
LK + FS + W G +T + G++ R Y VPYS+HS F
Sbjct: 633 LKHISNQYAGRFSLIVAFSPTGWTFGKGKKKTPGRRWQQGTIIR-----YEVPYSEHSSF 687
Query: 292 TEIEEFLNLVQPSNI 306
TE+ EF+ V P NI
Sbjct: 688 TELREFVKFVSPVNI 702
>gi|312066528|ref|XP_003136313.1| DNA ligase I [Loa loa]
Length = 581
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 33/184 (17%)
Query: 3 KGLISVDRWTEGSQV--YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPL-------K 53
G I+VD++ + + + YFLTH HSDH + + W GP++CS +TA + P+ K
Sbjct: 9 NGFIAVDKFPKDAAIKYYFLTHAHSDHYAAVDNKWNNGPIYCSPVTAHILPIVTHRPRSK 68
Query: 54 FPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGD-- 111
G+ LI LD+ WH + S V+ +DANH PG SVM LF GD
Sbjct: 69 RAGIRSHLIHALDLNVWHHMDGFS----------VMLLDANHVPG----SVMFLFEGDKI 114
Query: 112 -FGCLLYTGDFRWEASNERAEIGRNTL-VKALKDDVVDILYLDNTYCNSS-YAFPSREVA 168
G +L+TGDFR + + +N V L++ + +YLD TY N + FPSREV+
Sbjct: 115 SEGPILFTGDFRAD-----IRLYQNIFAVSVLRERSLSTIYLDTTYINCTREEFPSREVS 169
Query: 169 AQQI 172
+ +I
Sbjct: 170 SAEI 173
>gi|359475989|ref|XP_002280362.2| PREDICTED: uncharacterized protein LOC100256089 [Vitis vinifera]
Length = 842
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 141/315 (44%), Gaps = 54/315 (17%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G ++CS +TA+L +K G+ +++L + +I
Sbjct: 535 WFLTHFHLDHYQGLTRSFCHGKIYCSAITARLVNMKI-GIPWDRLQILPLNQKINID--- 590
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
V+V +DANHCPG S+++LF G +L+TGDFR+ T
Sbjct: 591 -------GVDVTCLDANHCPG----SIIILFEPSNGKAVLHTGDFRFSE--------EMT 631
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ----QIWVWPERLQTMHLLGFHDIFT 192
+ L+ + L LD TYCN Y FP +E Q I +T+ L+G + I
Sbjct: 632 SMSVLQMCPIHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFNPRTLFLIGSYTIGK 691
Query: 193 TKTSLTRVRAVPRYSFS-------IDTLE---------SLNTMHPTIGIMPSGLPWVVKP 236
+ L R + + + ++ LE +LN I ++P K
Sbjct: 692 ERLFLEVARVLRKKVYVNAAKLHILECLEFQKEDMQWFTLNEQESHIHVVPMWTLASFKR 751
Query: 237 LKGGGSLPGSLFSSY----QSKWR-ATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCF 291
LK + FS + W G +T + G++ R Y VPYS+HS F
Sbjct: 752 LKHISNQYAGRFSLIVAFSPTGWTFGKGKKKTPGRRWQQGTIIR-----YEVPYSEHSSF 806
Query: 292 TEIEEFLNLVQPSNI 306
TE+ EF+ V P NI
Sbjct: 807 TELREFVKFVSPVNI 821
>gi|357167428|ref|XP_003581158.1| PREDICTED: LOW QUALITY PROTEIN: DNA cross-link repair protein
SNM1-like [Brachypodium distachyon]
Length = 512
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 142/319 (44%), Gaps = 51/319 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H H DH GL+ W GP++C+ LTA+L + ++ I L++ + +
Sbjct: 162 EGCSAYFLSHFHYDHYGGLTKKWCHGPIYCTALTARLVKMLL-SINSEYICPLELNTEYV 220
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERAE 131
I V+ V ++ANHCPG + ++ FR D L+TGDFR S +
Sbjct: 221 IDGVT----------VTLLEANHCPG----AALIHFRLSDGKTYLHTGDFRASKSMQSHP 266
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL-----QTMHLLG 186
+ L+ +++LYLD TYCN Y FP +E + +R +T+ ++G
Sbjct: 267 L--------LQTGRINLLYLDTTYCNPKYKFPPQEDVIDFVVRTAQRYLKKQPKTLIVVG 318
Query: 187 FHDIFTTKTSLTRVRA--VPRYSFSI--DTLESLN--TMHPTIGIMPSGLPWVVKPLKGG 240
+ I L +A VP Y+ + L S + I P V PL
Sbjct: 319 AYSIGKENVYLAISQALEVPIYTDASRRRILHSFGWPDLSKRISSCDQSSPLHVMPL--- 375
Query: 241 GSLPGSLFSSYQS----------KWRATGGTQTEKLKEALGSV---DRFHKYIYSVPYSD 287
S+ + Y +R TG T +E + L + R IY VPYS+
Sbjct: 376 ASVQHEKLTKYLETLNQRFLAVLAFRPTGWTFSEAAGKELDLIKPSSRGRVTIYGVPYSE 435
Query: 288 HSCFTEIEEFLNLVQPSNI 306
HS FTE+ +FL V+P +
Sbjct: 436 HSSFTELRDFLKFVRPQKV 454
>gi|255574286|ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis]
gi|223532518|gb|EEF34307.1| DNA ligase I, putative [Ricinus communis]
Length = 1360
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 36/184 (19%)
Query: 5 LISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRV 64
LI R++ + YFLTH HSDH GLSS W++G +FCS++TA L + R+
Sbjct: 57 LIDAFRFSTAAAAYFLTHFHSDHYSGLSSNWSQGMIFCSQITANL-----------VTRI 105
Query: 65 LDIGSWHSISVVSPSSGEKTFV----EVIAIDANHCPGILGCSVMLLFR----GDFGCLL 116
L++ S V P T + E+ IDANHCPG +V LLF+ G F +
Sbjct: 106 LNVPS----QFVYPLPLNDTVIIDGSEITLIDANHCPG----AVQLLFKVRSSGTFEMYV 157
Query: 117 YTGDFRWEASNERAEIGRNTLVKALKDDV-VDILYLDNTYCNSSYAFPSREVAAQQIWVW 175
+TGDFR+ S E E+G L+D V D ++LD TYCN + FP ++ + +
Sbjct: 158 HTGDFRY--SREMKEVG------ILRDFVGCDAVFLDTTYCNPKFVFPKQQESIDYVVSV 209
Query: 176 PERL 179
ER+
Sbjct: 210 IERI 213
>gi|330805557|ref|XP_003290747.1| hypothetical protein DICPUDRAFT_37896 [Dictyostelium purpureum]
gi|325079097|gb|EGC32714.1| hypothetical protein DICPUDRAFT_37896 [Dictyostelium purpureum]
Length = 341
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 152/329 (46%), Gaps = 54/329 (16%)
Query: 12 TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+E + YFLTH HSDH G++ WA G ++C+ T +L K G+D I+ +
Sbjct: 20 SEDYKHYFLTHFHSDHYTGITKTWAFGNIYCTEETGRLVSHKL-GVDKKYIKGI------ 72
Query: 72 SISVVSPSSGEKTF----VEVIAIDANHCPGILGCSVMLLFR-----GDFGCLLYTGDFR 122
S KTF V+V +DANHCPG S ++LF G+ +L+TGDFR
Sbjct: 73 --------SFNKTFEVEGVKVTFLDANHCPG----SAIVLFEVKMPNGEIENILHTGDFR 120
Query: 123 WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--WVWPERL- 179
+ S ++ L+ + LYLDNT+CN Y FP + +Q+ V E
Sbjct: 121 YHPSMKQ--------YPHLEGKEISKLYLDNTFCNPEYTFPPQHEIIKQVKDIVRKENNG 172
Query: 180 QTMHLLGFHDIFTTKTSLTRVR------AVPRYSFSI-DTLESLNTMHPTIGIMPSGLPW 232
+T+ L G + I K L + V + F I + L+S++ T+ + +
Sbjct: 173 KTLFLFGTYVIGKEKILLEVSKQEGKPIGVTKEKFEILNCLDSIDQTKFTLDLTCTPFRA 232
Query: 233 VVKPLKGGGSLPGSLFSSYQS-----KWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSD 287
V L G S+ L S +R TG +Q+ K+++ +R YSV YS+
Sbjct: 233 VSMGLLGFQSMMNLLEESNGKYTKVIGFRPTGWSQS---KKSITYQNRGPTVFYSVAYSE 289
Query: 288 HSCFTEIEEFLNLVQPSNIRGIVSSSSCY 316
HS F E+ + ++ ++P I V + Y
Sbjct: 290 HSSFNELRDCIDQLRPKEIIPTVDCDTPY 318
>gi|395502101|ref|XP_003755424.1| PREDICTED: DNA cross-link repair 1A protein [Sarcophilus harrisii]
Length = 1037
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 145/316 (45%), Gaps = 47/316 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS++T+ L K + L +
Sbjct: 719 EGCTAYFLTHFHSDHYAGLSKKFT-FPVYCSKITSNLVKNKLCVQEQYLHPL-------P 770
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRWEASNERAE 131
+ V +G ++V+ +DANHCPG +VM+LF G + L+TGDFR S ER
Sbjct: 771 MDTVCTVNG----IKVVLLDANHCPG----AVMILFYLPNGTVTLHTGDFRANPSMERYS 822
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
+ L V LYLD TYC+ Y FPS++ +A + + + P L
Sbjct: 823 L--------LASQKVHTLYLDTTYCSPEYTFPSQQEVIQFAINIAFETVTLSPRTLVVCG 874
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVV 234
+ L D+ +K S+++ + + + SL T + ++ LP +
Sbjct: 875 TYSIGKEKIFLAIADVLGSKVSMSQEKYKTLQCLELQEVNSLITTDWSSALV-HLLPMMQ 933
Query: 235 KPLKGGGSLPGSLFSSYQS--KWRATGGTQTEKLKEALGSV--DRFHKYIYSVPYSDHSC 290
KG + Y++ +R TG T +EK V + + IY +PYS+HS
Sbjct: 934 INFKGLQNHLNKYGGKYENILAFRPTGWTHSEKFGSLADIVPQTKGNISIYGIPYSEHSS 993
Query: 291 FTEIEEFLNLVQPSNI 306
+ E++ F+ ++P I
Sbjct: 994 YLEMKRFVQWLKPQKI 1009
>gi|297814896|ref|XP_002875331.1| hypothetical protein ARALYDRAFT_484438 [Arabidopsis lyrata subsp.
lyrata]
gi|297321169|gb|EFH51590.1| hypothetical protein ARALYDRAFT_484438 [Arabidopsis lyrata subsp.
lyrata]
Length = 483
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 156/328 (47%), Gaps = 53/328 (16%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G YFLTH H+DH GL+ AW+ GP++CS LT++L +D S I L++ ++
Sbjct: 166 QGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLL-RLSLSVDPSFIHPLELDVEYT 224
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
I+ ++V I+ANHCPG LL D C L+TGDFR + +
Sbjct: 225 ING----------IKVTLIEANHCPGAALIHFRLL---DGTCYLHTGDFRASKKMQTHPL 271
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE-VAAQQIWVWPERL----QTMHLLGF 187
L + V +LYLD TYCN Y FPS+E V + + + + L +T+ ++G
Sbjct: 272 --------LFNQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGS 323
Query: 188 HDIFTTKTSLTRVRAVP------------RYSFSIDTLE---SLNTMHPTIGIMPSG--- 229
+ I L +A+ SF D + S + + ++P
Sbjct: 324 YSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKATCLHVLPMSSLK 383
Query: 230 LPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHK---YIYSVPYS 286
+ + + LK G++ + +R TG T +EK+ E L + K IY VPYS
Sbjct: 384 VERLDEHLKVYREQYGAVLA-----FRPTGWTYSEKIGEHLDLIKPTCKGKITIYGVPYS 438
Query: 287 DHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
+HS FTE+ EF+ ++P I V++++
Sbjct: 439 EHSSFTELREFVQFLRPDKIIPTVNNAN 466
>gi|321470539|gb|EFX81515.1| hypothetical protein DAPPUDRAFT_317592 [Daphnia pulex]
Length = 473
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 155/351 (44%), Gaps = 96/351 (27%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W + G +YFLTHLH+DHT+GL+S W ++ S L L + ++ L
Sbjct: 12 IAVDFWKLPPSNGLYLYFLTHLHTDHTKGLTSTWTET-IYTSSLNRDL-AISMLKVNPEL 69
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I+ L+IG + ++ FV V IDANH G SVM LF G FG LLYTGDF
Sbjct: 70 IKPLEIGVSYKMN---------RFVSVTPIDANHIKG----SVMYLFEGSFGRLLYTGDF 116
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAA------------ 169
RW S + +N + KD +++LY+DNT+ + FP+RE
Sbjct: 117 RWCESMINDPVLKN--LSESKD--LNVLYIDNTFEHIGNEFPTREQCTLDVLKIMKNHPY 172
Query: 170 ------------------------QQIWVWPERLQTMHLLGF--HDIFTTKTSLTRVRAV 203
++++V L+ LLG +IFTT + + +
Sbjct: 173 HRIIFGCQTIGKEDVLLQASLERKEKVYVPETILKCYRLLGLPCEEIFTTDQADSLLWFE 232
Query: 204 PRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQT 263
S L+ N+ PTI I L G L +++T
Sbjct: 233 KLNQISQFDLKKKNSEMPTIAI----------KLTASGLL-----------YKST----- 266
Query: 264 EKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
K K+ + I++VPYS+HS +E+ + L+ +QP + IV +++
Sbjct: 267 -KFKD--------DELIFTVPYSNHSSASELAKCLDFLQPGLVERIVRTNT 308
>gi|291404840|ref|XP_002718800.1| PREDICTED: DNA cross-link repair 1A isoform 2 [Oryctolagus cuniculus]
Length = 1028
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 143/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++C+ +T L K + I L + +
Sbjct: 711 EGCSAYFLTHFHSDHYAGLSKN-STFPVYCTEITGNLLKNKL-HVQEQYIHTLPMDTECV 768
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V+V+ +DANHCPG + M+LF G +L+TGDFR S ER+
Sbjct: 769 VN----------GVKVVLLDANHCPG----AAMILFHLPNGTVMLHTGDFRANPSMERS- 813
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 814 --------LLAGQKVHVLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCG 865
Query: 180 -----QTMHLLGFHDIFTTKTSLT-------RVRAVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K ++ R +P + + D SL + P + I
Sbjct: 866 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEINSLITTDMCNSLVHLLPMMQI 925
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T ++KL + + + IY +
Sbjct: 926 NFKGLQSHLK--KFGGKYDEIL------AFRPTGWTHSDKLTTMADVIPQTKGNISIYGI 977
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS F E++ F+ ++P I
Sbjct: 978 PYSEHSSFLEMKRFVQWLKPQKI 1000
>gi|452821333|gb|EME28365.1| DNA ligase [Galdieria sulphuraria]
Length = 574
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 150/326 (46%), Gaps = 40/326 (12%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FL+H HSDHT GL+S + G +FCSR+TA L + G+ I VL++ +
Sbjct: 246 FFLSHFHSDHTMGLTSRFQAGVIFCSRITASLIRSQL-GVKDEYICVLELNQSCYVQDEG 304
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFR--GDFGCLLYTGDFRWEASNERAEIGRN 135
S+ V +DANHCPG SVM LF +L+TGDFR+ +
Sbjct: 305 KSTRGTMGATVTVLDANHCPG----SVMFLFFVWQTKELILHTGDFRYSIE------LHS 354
Query: 136 TLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIW--VWPERLQT--MHLLGFHDIF 191
+ + +D L+LD TYCN Y FPS++ A + + V E + + L G + I
Sbjct: 355 QIPQMFGKSCLDYLFLDTTYCNPRYDFPSQQEAVEAVLEAVKAESFHSRVLFLFGTYQIG 414
Query: 192 TTKTSL-------TRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLK-----G 239
K L +V R ++ L + + PS V ++ G
Sbjct: 415 KEKVFLHVAERLNEKVYVDKRKYRILNHLSLPENVQNLLTTEPSASRLHVVDMRTVSFGG 474
Query: 240 GGSLPGSLFSSYQS--KWRATGGTQT-EKLKEALGSVD--------RFHKYIYSVPYSDH 288
+ + + Y + +R TG + T +K+ + G++ + + +Y VPYS+H
Sbjct: 475 MREIAKNYATRYNTFVAFRPTGWSYTGKKMLRSYGNLKPGILTRQLKQNCVLYGVPYSEH 534
Query: 289 SCFTEIEEFLNLVQPSNIRGIVSSSS 314
S F+E+ EF+++ +P N+ V +S
Sbjct: 535 SSFSELREFVSICRPKNLIPTVCKNS 560
>gi|428698111|pdb|4B87|A Chain A, Crystal Structure Of Human Dna Cross-Link Repair 1a
Length = 367
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 145/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 50 EGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKL-HVQEQYIHPLPLDTECI 107
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
++ V +V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 108 VNGV----------KVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMERS- 152
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 153 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCG 204
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ + +P + + D SL + P + I
Sbjct: 205 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQI 264
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 265 NFKGLQSHLK--KCGGKYNQIL------AFRPTGWTHSNKFTRIADVIPQTKGNISIYGI 316
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 317 PYSEHSSYLEMKRFVQWLKPQKI 339
>gi|357465917|ref|XP_003603243.1| DNA cross-link repair 1A protein [Medicago truncatula]
gi|355492291|gb|AES73494.1| DNA cross-link repair 1A protein [Medicago truncatula]
Length = 671
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 142/310 (45%), Gaps = 47/310 (15%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G ++CS +TA+L + G+ + +L + I+ +
Sbjct: 367 WFLTHFHMDHYQGLTKSFNHGKIYCSSVTARLVNMNI-GIPYDKLHILPLNQKVEIAGIG 425
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTL 137
V +DANHCPG S+++LF +L+TGDFR+ E+ N L
Sbjct: 426 ----------VTCLDANHCPG----SIIILFEP--PNVLHTGDFRYS-----EEMANNPL 464
Query: 138 VKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ----QIWVWPERLQTMHLLGFHDIFTT 193
++ + L LD TYCN Y FP +E Q I +T+ L+G + I
Sbjct: 465 LQTCP---IHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFNPRTLFLIGSYTIGKE 521
Query: 194 KTSL--------------TRVRAVPRYSFSIDTLE--SLNTMHPTIGIMPSGLPWVVKPL 237
+ L ++R + F+ + ++ + N I + P K L
Sbjct: 522 RLFLEVARSLHQKVYVTAAKLRLLKCLEFTEEDMQWFTSNEHESNIHVAPMWTLASFKRL 581
Query: 238 KGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYI-YSVPYSDHSCFTEIEE 296
K S S FS + + TG T + K++ G + I Y VPYS+H FTE++E
Sbjct: 582 KHISSQYASRFSLIVA-FSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKE 640
Query: 297 FLNLVQPSNI 306
F+N V P NI
Sbjct: 641 FVNFVSPDNI 650
>gi|291404838|ref|XP_002718799.1| PREDICTED: DNA cross-link repair 1A isoform 1 [Oryctolagus cuniculus]
Length = 1043
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 143/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++C+ +T L K + I L + +
Sbjct: 726 EGCSAYFLTHFHSDHYAGLSKN-STFPVYCTEITGNLLKNKL-HVQEQYIHTLPMDTECV 783
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V+V+ +DANHCPG + M+LF G +L+TGDFR S ER+
Sbjct: 784 VN----------GVKVVLLDANHCPG----AAMILFHLPNGTVMLHTGDFRANPSMERS- 828
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 829 --------LLAGQKVHVLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCG 880
Query: 180 -----QTMHLLGFHDIFTTKTSLT-------RVRAVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K ++ R +P + + D SL + P + I
Sbjct: 881 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEINSLITTDMCNSLVHLLPMMQI 940
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T ++KL + + + IY +
Sbjct: 941 NFKGLQSHLK--KFGGKYDEIL------AFRPTGWTHSDKLTTMADVIPQTKGNISIYGI 992
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS F E++ F+ ++P I
Sbjct: 993 PYSEHSSFLEMKRFVQWLKPQKI 1015
>gi|380818542|gb|AFE81144.1| DNA cross-link repair 1A protein [Macaca mulatta]
Length = 1039
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 143/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 722 EGCTAYFLTHFHSDHYAGLSKHFT-FPVYCSEITGNLLKNKL-HVQEQYIHTLPLDTECV 779
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V +V+ +DANHCPG +VM+LF G +L+TGDFR + S E +
Sbjct: 780 VNGV----------KVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMEHS- 824
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 825 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHTLVVCG 876
Query: 180 -----QTMHLLGFHDIFTTKTSLT-------RVRAVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K ++ R +P + + D SL + P + I
Sbjct: 877 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEINSLITTDMCSSLVHLLPMMQI 936
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 937 NFKGLQNHLK--KYGGKYNQIL------AFRPTGWTHSNKFPRIADVIPQTKGNISIYGI 988
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 989 PYSEHSSYLEMKRFVQWLKPQKI 1011
>gi|157818805|ref|NP_001099671.1| DNA cross-link repair 1A protein [Rattus norvegicus]
gi|149040461|gb|EDL94499.1| DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae) (predicted)
[Rattus norvegicus]
Length = 1026
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 146/323 (45%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + R P++CS +T L K + I L + +
Sbjct: 709 EGCTAYFLTHFHSDHYAGLSKDFTR-PIYCSEITGSLLKKKL-RVQEQYIHQLPMDTECI 766
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRWEASNERAE 131
+ V+V+ +DANHCPG + M+LF+ G + L+TGDFR + S ER
Sbjct: 767 VD----------GVKVVLLDANHCPG----ATMILFQLPNGAVTLHTGDFRADPSMER-- 810
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ--------QIWVWPERL---- 179
+L+ + K V L+LD TYC+ Y FPS++ A Q + + P L
Sbjct: 811 ----SLLASRK---VHTLFLDTTYCSPEYTFPSQQEAIQFAINTAFEAVTLNPRALIVCG 863
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ + +P S + D SL + P + I
Sbjct: 864 TYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCNSLVHLLPMMQI 923
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKE--ALGSVDRFHKYIYSV 283
GL +K K GG L +R TG T + + + + + IY +
Sbjct: 924 NFKGLQNHLK--KCGGKFDQIL------AFRPTGWTHSNNITSIADITPQTKGNIAIYGI 975
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 976 PYSEHSSYLEMKRFVQWLKPQKI 998
>gi|296221247|ref|XP_002756651.1| PREDICTED: DNA cross-link repair 1A protein [Callithrix jacchus]
Length = 1046
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 147/328 (44%), Gaps = 62/328 (18%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 729 EGCTAYFLTHFHSDHYAGLSKHFT-FPVYCSEITGNLLKNKL-HVQEQYIHPLPLDTECI 786
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V+V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 787 VN----------GVKVVLLDANHCPG----AVMILFCLPNGTVILHTGDFRADPSMERS- 831
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L + V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 832 --------LLANREVHVLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCG 883
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ + +P + + D SL + P + I
Sbjct: 884 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPDINSLITTDMCSSLVHLLPMMQI 943
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 944 NFKGLQSHLK--KYGGKYDQIL------AFRPTGWTHSNKFTRIADVIPQTKGNISIYGI 995
Query: 284 PYSDHSCFTEIEEFLNLVQPSNIRGIVS 311
PYS+HS F E++ F+ ++P I V+
Sbjct: 996 PYSEHSSFLEMKRFVQWLKPQKIIPTVN 1023
>gi|10434517|dbj|BAB14284.1| unnamed protein product [Homo sapiens]
Length = 443
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 103/264 (39%), Gaps = 88/264 (33%)
Query: 88 VIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVD 147
V +DANHCPG SVM LF G FG +LYTGDFR+ S + TL K +
Sbjct: 3 VTLLDANHCPG----SVMFLFEGYFGTILYTGDFRYTPSMLKEPA--LTLGKQ-----IH 51
Query: 148 ILYLDNTYCNSSYAFPSREVAAQQI----------------------------------W 173
LYLDNT CN + PSR+ AA QI W
Sbjct: 52 TLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHNIKIGLYSLGKESLLEQLALEFQTW 111
Query: 174 VW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLP 231
V P RL+ + LLG D+FT + R+ AV + N HPTI I+P+
Sbjct: 112 VVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDHMETCHSNMLRWNQTHPTIAILPTS-- 169
Query: 232 WVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCF 291
+ H I+ +PYSDHS +
Sbjct: 170 ---------------------------------------RKIHSSHPDIHVIPYSDHSSY 190
Query: 292 TEIEEFLNLVQPSNIRGIVSSSSC 315
+E+ F+ ++P + IVS C
Sbjct: 191 SELRAFVAALKPCQVVPIVSRRPC 214
>gi|296422077|ref|XP_002840589.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636808|emb|CAZ84780.1| unnamed protein product [Tuber melanosporum]
Length = 950
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 159/377 (42%), Gaps = 101/377 (26%)
Query: 4 GLISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDL 59
G I+VD + GS Q YFL+H HSDH GL+S W GP++CSR TA L +K +D
Sbjct: 571 GSITVDAFKYGSIPGCQAYFLSHFHSDHYVGLTSKWDHGPIWCSRATANLVRMKL-RVDP 629
Query: 60 SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC----- 114
++ W + + V +DANHCPG S++ LF D C
Sbjct: 630 KYVQEFPFEEWTDVV---------DGIRVRGLDANHCPG----SMLFLFEQD--CVGRLG 674
Query: 115 ---LLYTGDFRWEASNERAEIGRNTLVKALKDDV----VDILYLDNTYCNSSYAFPS--- 164
+L+ GDFR A + + L++ KD V +D +YLD TY N YAFPS
Sbjct: 675 KQRILHCGDFRASAKHL-----NHPLLRPGKDGVKGQKLDSVYLDTTYLNPKYAFPSQKS 729
Query: 165 -------------REVAAQQIWVWPERLQTMHLLG--------------------FHDIF 191
+E Q + + M+ +G +F
Sbjct: 730 VIKACEELCVGLNKESIDGQGGTFAKTATLMNRMGKFGSSSLLWGPIVSEKRKSELQKLF 789
Query: 192 TTKTSLTRVRA-------VPRYSFSIDTL-ESLNTMHP----TIGIMPSGLPWVVKP--- 236
K+S ++R+ P + +TL + LN +P +G+ PSG W +P
Sbjct: 790 APKSSHHKIRSKFASVHMTPLMKINPETLRDYLNKFNPHFSRIVGLRPSG--WSYRPPSN 847
Query: 237 -LKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIE 295
L S+ L S + W+ G + +L GS YSVPYS+HS F E+
Sbjct: 848 RLTDSPSVNNVLHS---ASWK--GEYRLSELLPQHGSTR--ESKCYSVPYSEHSSFRELT 900
Query: 296 EFLNLVQPSNIRGIVSS 312
F + NIR I+ +
Sbjct: 901 MFCCAL---NIRKIIPT 914
>gi|355562792|gb|EHH19386.1| hypothetical protein EGK_20079 [Macaca mulatta]
gi|355783112|gb|EHH65033.1| hypothetical protein EGM_18373 [Macaca fascicularis]
Length = 1039
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 142/323 (43%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L +
Sbjct: 722 EGCTAYFLTHFHSDHYAGLSKHFT-FPVYCSEITGNLLKNKL-HVQEQYIHTLPL----D 775
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
I V V+V+ +DANHCPG +VM+LF G +L+TGDFR + S E +
Sbjct: 776 IECVV------NGVKVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMEHS- 824
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 825 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHTLVVCG 876
Query: 180 -----QTMHLLGFHDIFTTKTSLT-------RVRAVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K ++ R +P + + D SL + P + I
Sbjct: 877 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEINSLITTDMCSSLVHLLPMMQI 936
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 937 NFKGLQNHLK--KYGGKYNQIL------AFRPTGWTHSNKFPRIADVIPQTKGNISIYGI 988
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 989 PYSEHSSYLEMKRFVQWLKPQKI 1011
>gi|109090605|ref|XP_001090942.1| PREDICTED: DNA cross-link repair 1A protein [Macaca mulatta]
Length = 1039
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 142/323 (43%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L +
Sbjct: 722 EGCTAYFLTHFHSDHYAGLSKHFT-FPVYCSEITGNLLKNKL-HVQEQYIHTLPL----D 775
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
I V V+V+ +DANHCPG +VM+LF G +L+TGDFR + S E +
Sbjct: 776 IECVV------NGVKVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMEHS- 824
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 825 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHTLVVCG 876
Query: 180 -----QTMHLLGFHDIFTTKTSLT-------RVRAVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K ++ R +P + + D SL + P + I
Sbjct: 877 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEINSLITTDMCSSLVHLLPMMQI 936
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 937 NFKGLQNHLK--KYGGKYNQIL------AFRPTGWTHSNKFPRIADVIPQTKGNISIYGI 988
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 989 PYSEHSSYLEMKRFVQWLKPQKI 1011
>gi|56798256|dbj|BAD82911.1| Snm1 [Oryza sativa Japonica Group]
Length = 485
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 149/325 (45%), Gaps = 63/325 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H H DH GL+ W GP++C+ LTA+L + ++ I L++ +
Sbjct: 163 EGCNAYFLSHFHHDHYGGLTKKWCHGPIYCTALTARLVKMCL-SVNPEYICPLELDKEYV 221
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERAE 131
I VS V ++ANHCPG + ++ FR GD L+TGDFR S +
Sbjct: 222 IEGVS----------VTLLEANHCPG----AALIHFRLGDGKKYLHTGDFRASKSMQ--- 264
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE------VAAQQIWVWPERLQTMHLL 185
L L+ +++LYLD TYCN Y FP +E V + ++ E +T+ ++
Sbjct: 265 -----LYPLLQRGQINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEP-KTLIVV 318
Query: 186 GFHDIFTTKTSLTRVRA--VPRYS----------FSIDTLESL---NTMHPTIGIMP--- 227
G + I L +A VP Y+ F L + ++ ++ ++P
Sbjct: 319 GAYSIGKENVYLAISKALQVPIYTDASRRRILHAFGWSDLSKMICSDSQSSSLHVLPLSS 378
Query: 228 ---SGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV---DRFHKYIY 281
L ++ LK F + + +R TG T +E+ L + R IY
Sbjct: 379 LRHENLQKYLETLK-------QRFLAVLA-FRPTGWTFSEETGNQLDLIKPSSRGKITIY 430
Query: 282 SVPYSDHSCFTEIEEFLNLVQPSNI 306
VPYS+HS F+E+ EF+ ++P +
Sbjct: 431 GVPYSEHSSFSELREFVMFLRPQKV 455
>gi|115458180|ref|NP_001052690.1| Os04g0401800 [Oryza sativa Japonica Group]
gi|38345210|emb|CAD40784.2| OSJNBb0012E08.8 [Oryza sativa Japonica Group]
gi|113564261|dbj|BAF14604.1| Os04g0401800 [Oryza sativa Japonica Group]
gi|116309317|emb|CAH66404.1| OSIGBa0155K12.7 [Oryza sativa Indica Group]
Length = 481
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 149/326 (45%), Gaps = 63/326 (19%)
Query: 12 TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
EG YFL+H H DH GL+ W GP++C+ LTA+L + ++ I L++ +
Sbjct: 162 VEGCNAYFLSHFHHDHYGGLTKKWCHGPIYCTALTARLVKMCL-SVNPEYICPLELDKEY 220
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERA 130
I VS V ++ANHCPG + ++ FR GD L+TGDFR S +
Sbjct: 221 VIEGVS----------VTLLEANHCPG----AALIHFRLGDGKKYLHTGDFRASKSMQ-- 264
Query: 131 EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE------VAAQQIWVWPERLQTMHL 184
L L+ +++LYLD TYCN Y FP +E V + ++ E +T+ +
Sbjct: 265 ------LYPLLQRGQINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEP-KTLIV 317
Query: 185 LGFHDIFTTKTSLTRVRA--VPRYS----------FSIDTLESL---NTMHPTIGIMP-- 227
+G + I L +A VP Y+ F L + ++ ++ ++P
Sbjct: 318 VGAYSIGKENVYLAISKALQVPIYTDASRRRILHAFGWSDLSKMICSDSQSSSLHVLPLS 377
Query: 228 ----SGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV---DRFHKYI 280
L ++ LK F + + +R TG T +E+ L + R I
Sbjct: 378 SLRHENLQKYLETLK-------QRFLAVLA-FRPTGWTFSEETGNQLDLIKPSSRGKITI 429
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNI 306
Y VPYS+HS F+E+ EF+ ++P +
Sbjct: 430 YGVPYSEHSSFSELREFVMFLRPQKV 455
>gi|356560410|ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like [Glycine max]
Length = 505
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 155/346 (44%), Gaps = 77/346 (22%)
Query: 1 MEKGLISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M + +VD + EG YFLTH H DH GLS W+ GP++CS LT +L +
Sbjct: 172 MPGTMFTVDAFRYGCVEGCSAYFLTHFHCDHYGGLSKKWSHGPIYCSPLTGRLVQMCL-S 230
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-L 115
++ I L+ H I V+V ++ANHCPG + ++ F G
Sbjct: 231 VNPLYIHPLEFNEEHVIDG----------VKVTLLEANHCPG----AALIHFNLPNGQRY 276
Query: 116 LYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSSYAFPSRE------ 166
L+TGDFR L++A L + V++LYLD TYCN Y FPS+E
Sbjct: 277 LHTGDFR-----------ACKLMQAYHLLVNQRVNVLYLDTTYCNPKYRFPSKEEVLNYV 325
Query: 167 --VAAQQIWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIG 224
+ + + P +T+ ++G + I L +A+ ++ + +
Sbjct: 326 VKITKNHLKIHP---RTLVVVGAYSIGKECVYLAISKALGVKIYANASRRRI-------- 374
Query: 225 IMPSGLPWVVKPLKGGGS------LPGS---------LFSSYQSK------WRATGGTQT 263
+ G P + L G+ LP S +Y+ + +R TG T +
Sbjct: 375 LQAFGWPDLSDKLCTNGNNTLLHVLPMSSLRVETLKDYLKTYKEQFTAILAFRPTGWTFS 434
Query: 264 EKLK---EALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
EK+ E + V + + IY VPYS+HS F+E+++F+ +++P I
Sbjct: 435 EKISNDLELIKPVSKGNITIYGVPYSEHSSFSELQDFVQVLRPDKI 480
>gi|222628797|gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japonica Group]
Length = 517
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 149/325 (45%), Gaps = 63/325 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H H DH GL+ W GP++C+ LTA+L + ++ I L++ +
Sbjct: 163 EGCNAYFLSHFHHDHYGGLTKKWCHGPIYCTALTARLVKMCL-SVNPEYICPLELDKEYV 221
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERAE 131
I VS V ++ANHCPG + ++ FR GD L+TGDFR S +
Sbjct: 222 IEGVS----------VTLLEANHCPG----AALIHFRLGDGKKYLHTGDFRASKSMQ--- 264
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE------VAAQQIWVWPERLQTMHLL 185
L L+ +++LYLD TYCN Y FP +E V + ++ E +T+ ++
Sbjct: 265 -----LYPLLQRGQINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEP-KTLIVV 318
Query: 186 GFHDIFTTKTSLTRVRA--VPRYS----------FSIDTLESL---NTMHPTIGIMP--- 227
G + I L +A VP Y+ F L + ++ ++ ++P
Sbjct: 319 GAYSIGKENVYLAISKALQVPIYTDASRRRILHAFGWSDLSKMICSDSQSSSLHVLPLSS 378
Query: 228 ---SGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV---DRFHKYIY 281
L ++ LK F + + +R TG T +E+ L + R IY
Sbjct: 379 LRHENLQKYLETLK-------QRFLAVLA-FRPTGWTFSEETGNQLDLIKPSSRGKITIY 430
Query: 282 SVPYSDHSCFTEIEEFLNLVQPSNI 306
VPYS+HS F+E+ EF+ ++P +
Sbjct: 431 GVPYSEHSSFSELREFVMFLRPQKV 455
>gi|402881531|ref|XP_003904323.1| PREDICTED: DNA cross-link repair 1A protein [Papio anubis]
Length = 1039
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 143/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 722 EGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKL-HVQEQYIHPLPLDTECV 779
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V +V+ +DANHCPG +VM+LF G +L+TGDFR + S E +
Sbjct: 780 VNGV----------KVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMEHS- 824
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 825 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHALVVCG 876
Query: 180 -----QTMHLLGFHDIFTTKTSLT-------RVRAVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K ++ R +P + + D SL + P + I
Sbjct: 877 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEINSLITTDMCSSLVHLLPMMQI 936
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
GL +K K GG L +R TG T + K + + + IY +
Sbjct: 937 NFKGLQNHLK--KYGGKYNQIL------AFRPTGWTHSNKFPRIADVIPQTKGNISIYGI 988
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 989 PYSEHSSYLEMKRFVQWLKPQKI 1011
>gi|242049406|ref|XP_002462447.1| hypothetical protein SORBIDRAFT_02g025710 [Sorghum bicolor]
gi|241925824|gb|EER98968.1| hypothetical protein SORBIDRAFT_02g025710 [Sorghum bicolor]
Length = 963
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 140/318 (44%), Gaps = 60/318 (18%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G ++CS +TA L K G+ + VL + +I VS
Sbjct: 655 WFLTHFHVDHYQGLTRSFCHGKIYCSSITASLVHHKI-GIPWDRLHVLTLNEKLTIGGVS 713
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
+ DANHCPG S+++LF G +L+TGDFR+ +E+ N
Sbjct: 714 ----------LTCFDANHCPG----SIIILFEPPNGKAVLHTGDFRFS-----SEMANNP 754
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ----QIWVWPERLQTMHLLGFHDIFT 192
+ L+ + L LD TYCN Y FPS+E+ Q I +T+ L+G + I
Sbjct: 755 V---LQSSHIHTLILDTTYCNPRYDFPSQEIVIQFVIEAIQAEAFNPKTLFLIGSYTIGK 811
Query: 193 TKTSLTRVRAVPRYSF----SIDTLESL------------NTMHPTIGIMPSGLPWVVKP 236
+ + R + + + + L+ L N I ++P W +
Sbjct: 812 ERLFMEVARLLQKKIYVGAAKLQILKHLELPQEIMHWFTANEAESHIHVVPM---WTLAS 868
Query: 237 LKGGGSLPGSLFSSYQ-------SKWR-ATGGTQTEKLKEALGSVDRFHKYIYSVPYSDH 288
K L + + W G +T + GS+ R Y VPYS+H
Sbjct: 869 FKRMKYLSNQYAGQFDLIVAFCPTGWAFGKGRKKTPGKRWQQGSIIR-----YEVPYSEH 923
Query: 289 SCFTEIEEFLNLVQPSNI 306
S FTE++EF+ + P +I
Sbjct: 924 SSFTELQEFVKFISPEHI 941
>gi|426366239|ref|XP_004050168.1| PREDICTED: DNA cross-link repair 1A protein [Gorilla gorilla gorilla]
Length = 1040
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 140/316 (44%), Gaps = 48/316 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 723 EGCTAYFLTHFHSDHYAGLSKHFT-FPVYCSEITGNLLKNKL-HVQEQYIHPLPLDTECI 780
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V +V+ +DANHCPG +VM+LF G +L+TGDFR + S E +
Sbjct: 781 VNGV----------KVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSMEHS- 825
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L D V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 826 --------LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCG 877
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVV 234
+ L D+ +K +++ + +I + SL T ++ LP +
Sbjct: 878 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLV-HLLPMMQ 936
Query: 235 KPLKGGGSLPGSLFSSYQS--KWRATGGTQTEKLKEALGSV--DRFHKYIYSVPYSDHSC 290
KG S Y +R TG T + K + + + IY +PYS+HS
Sbjct: 937 INFKGLQSHLKKCRGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSS 996
Query: 291 FTEIEEFLNLVQPSNI 306
+ E++ F+ ++P I
Sbjct: 997 YLEMKRFVQWLKPQKI 1012
>gi|7595835|gb|AAF64472.1|AF241240_1 SNM1 protein [Mus musculus]
Length = 1023
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 146/324 (45%), Gaps = 64/324 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + R P++CS +T L K + IR L +
Sbjct: 706 EGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEITGNLLKKKL-RVQEQYIRQLPMD---- 759
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
+ V+V+ +DANHCPG + M+LF+ G +L+TGDFR + S ER+
Sbjct: 760 ------TECVVDSVKVVFVDANHCPG----ATMILFQLPNGAVILHTGDFRADPSMERSR 809
Query: 132 I-GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL--- 179
+ GR V L+LD TYC+ Y FPS++ A + + + P L
Sbjct: 810 LAGRK----------VHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVC 859
Query: 180 ------QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIG 224
+ L D+ +K +++ + +P S + D +SL + P +
Sbjct: 860 GTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVHLLPMMQ 919
Query: 225 IMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVD--RFHKYIYS 282
I GL +K K GG L +R TG T + + + R + IY
Sbjct: 920 INFKGLQSHLK--KCGGKYDQIL------AFRPTGWTHSNNITSTADIIPQTRGNISIYG 971
Query: 283 VPYSDHSCFTEIEEFLNLVQPSNI 306
+PYS+HS + E++ F+ ++P I
Sbjct: 972 IPYSEHSSYLEMKRFVQWLKPQKI 995
>gi|449486809|ref|XP_004157409.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101218609
[Cucumis sativus]
Length = 774
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 46/311 (14%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G ++CS +TAKL +K G+ ++VL + +I+
Sbjct: 466 WFLTHFHMDHYQGLTKSFCHGMIYCSTITAKLVNMKI-GIPWERLQVLPLDQKINIA--- 521
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
V+V DANHCPG S+++LF G +L+TGDFR+ ++G +
Sbjct: 522 -------GVDVTCFDANHCPG----SIIILFEPPNGKAVLHTGDFRF-----CEQMGGLS 565
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ----QIWVWPERLQTMHLLGFHDIFT 192
+ + + + L LD TYC+ Y FP +E Q I +T+ L+G + I
Sbjct: 566 VFQTCR---IHTLVLDTTYCDPQYDFPKQETVIQFVIDAIQAEAFNPKTLFLIGCYTIGK 622
Query: 193 TKTSL--------------TRVRAVPRYSFSIDTLE--SLNTMHPTIGIMPSGLPWVVKP 236
+ L ++R + FS + ++ ++N I ++P K
Sbjct: 623 ERLFLEVARVLRKKVYVTAAKLRILKCLGFSAEDMKWFTVNERESHIHVVPLWTLASFKR 682
Query: 237 LKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYI-YSVPYSDHSCFTEIE 295
LK + + FS + + TG ++ K++ G + I Y VPYS+HS F+E++
Sbjct: 683 LKHVSTQYANRFSLIVA-FSPTGWALSKGKKKSPGRRWQQGTIIRYEVPYSEHSSFSELK 741
Query: 296 EFLNLVQPSNI 306
+F+ LV P+NI
Sbjct: 742 DFVKLVSPANI 752
>gi|449447365|ref|XP_004141439.1| PREDICTED: uncharacterized protein LOC101218609 [Cucumis sativus]
Length = 774
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 46/311 (14%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G ++CS +TAKL +K G+ ++VL + +I+
Sbjct: 466 WFLTHFHMDHYQGLTKSFCHGMIYCSTITAKLVNMKI-GIPWERLQVLPLDQKINIA--- 521
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
V+V DANHCPG S+++LF G +L+TGDFR+ ++G +
Sbjct: 522 -------GVDVTCFDANHCPG----SIIILFEPPNGKAVLHTGDFRF-----CEQMGGLS 565
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ----QIWVWPERLQTMHLLGFHDIFT 192
+ + + + L LD TYC+ Y FP +E Q I +T+ L+G + I
Sbjct: 566 VFQTCR---IHTLVLDTTYCDPQYDFPKQETVIQFVIDAIQAEAFNPKTLFLIGCYTIGK 622
Query: 193 TKTSL--------------TRVRAVPRYSFSIDTLE--SLNTMHPTIGIMPSGLPWVVKP 236
+ L ++R + FS + ++ ++N I ++P K
Sbjct: 623 ERLFLEVARVLRKKVYVTAAKLRILKCLGFSAEDMKWFTVNERESHIHVVPLWTLASFKR 682
Query: 237 LKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYI-YSVPYSDHSCFTEIE 295
LK + + FS + + TG ++ K++ G + I Y VPYS+HS F+E++
Sbjct: 683 LKHVSTQYANRFSLIVA-FSPTGWALSKGKKKSPGRRWQQGTIIRYEVPYSEHSSFSELK 741
Query: 296 EFLNLVQPSNI 306
+F+ LV P+NI
Sbjct: 742 DFVKLVSPANI 752
>gi|115479355|ref|NP_001063271.1| Os09g0439000 [Oryza sativa Japonica Group]
gi|113631504|dbj|BAF25185.1| Os09g0439000 [Oryza sativa Japonica Group]
Length = 966
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 145/339 (42%), Gaps = 102/339 (30%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G ++CS +TA L K G+ + VL + +I+ V+
Sbjct: 658 WFLTHFHVDHYQGLTKSFCHGKIYCSSVTANLVHYKI-GIPWDRLHVLPLNEKITIAGVN 716
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
+ DANHCPG +V++LF G +L+TGDFR+ +E+ N
Sbjct: 717 ----------LTCFDANHCPG----AVIILFEPSNGKAVLHTGDFRFS-----SEMANN- 756
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ-------------------------- 170
+ L+ + L LD TYCN Y FP++E+ Q
Sbjct: 757 --RVLQSSPIHTLILDTTYCNPRYDFPTQEIVIQFVIEAIQAEAFNPKTLFLIGSYTIGK 814
Query: 171 -------------QIWVWPERLQTMHLLGF-HDI---FTTKTSLTRVRAVPRYSF-SIDT 212
+I+V +LQ + LG +I FT + + + VP ++ S
Sbjct: 815 ERLYMEVARLLQKKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVVPMWTLASFKR 874
Query: 213 LESLNTMHPT-----IGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLK 267
++ L+T + + P+G W KG PG KW+
Sbjct: 875 MKYLSTQYADRFDLIVAFCPTG--WSFG--KGKKRTPG-------RKWQQ---------- 913
Query: 268 EALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
G++ R Y VPYS+HS FTE+ EF+ + P +I
Sbjct: 914 ---GAIIR-----YEVPYSEHSSFTELREFVRFISPEHI 944
>gi|218194787|gb|EEC77214.1| hypothetical protein OsI_15746 [Oryza sativa Indica Group]
Length = 418
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 131/294 (44%), Gaps = 60/294 (20%)
Query: 12 TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
EG YFL+H H DH GL+ W GP++C+ LTA+L + ++ I L++ +
Sbjct: 162 VEGCNAYFLSHFHHDHYGGLTKKWCHGPIYCTALTARLVKMCL-SVNPEYICPLELDKEY 220
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERA 130
I VS V ++ANHCPG + ++ FR GD L+TGDFR S +
Sbjct: 221 VIEGVS----------VTLLEANHCPG----AALIHFRLGDGKKYLHTGDFRASKSMQ-- 264
Query: 131 EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE------VAAQQIWVWPERLQTMHL 184
L L+ +++LYLD TYCN Y FP +E V + ++ E +T+ +
Sbjct: 265 ------LYPLLQRGQINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEP-KTLIV 317
Query: 185 LGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLP 244
+G + I L +A+ ++TL+ + P+G W
Sbjct: 318 VGAYSIGKENVYLAISKALQNLQKYLETLK--QRFLAVLAFRPTG--WT----------- 362
Query: 245 GSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFL 298
+ G Q + +K + R IY VPYS+HS F+E+ EF+
Sbjct: 363 ----------FSEETGNQLDLIKPS----SRGKITIYGVPYSEHSSFSELREFV 402
>gi|260828015|ref|XP_002608959.1| hypothetical protein BRAFLDRAFT_287105 [Branchiostoma floridae]
gi|229294313|gb|EEN64969.1| hypothetical protein BRAFLDRAFT_287105 [Branchiostoma floridae]
Length = 377
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 154/330 (46%), Gaps = 61/330 (18%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G YFL+H H DH QGLS + R ++ S++T L K IRV D H +
Sbjct: 52 GCTAYFLSHFHYDHYQGLSKHF-RHAIYSSKVTCNLVKKK--------IRVAD-RYLHPL 101
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERAEI 132
+ +P E V+V ++ANHCPG +VM LF+ D LL+TGDFR + S E
Sbjct: 102 PLNTPCDVEG--VQVTLLEANHCPG----AVMFLFQLPDGKNLLHTGDFRADTSME---- 151
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR-EVAAQQIWVWPERLQ----TMHLLGF 187
AL V LYLD TYCN +Y+FP++ EV + V E +Q T+ + G
Sbjct: 152 ----CYPALTGCKVHTLYLDTTYCNPAYSFPAQMEVIDFAVGVAVEAVQHNPKTLIVCGS 207
Query: 188 HDI------FTTKTSL-TRVRAVPRYSFSIDTLES--------LNTMHPTIGIMPSGLPW 232
+ I F +L +V A ++D L+S LN + ++P
Sbjct: 208 YTIGKERVFFAIAEALGCKVCATRDKKNTLDCLDSDQVKRLVTLNGRETRLHVLP----- 262
Query: 233 VVKPLKGGGSLPGSLFSSYQSKWRA------TGGTQTEKLKEALGSVDRFHKYI--YSVP 284
+K LK SL S Y+ ++ + TG T + + H I Y +P
Sbjct: 263 -MKDLK-FNSL-KSYLEGYRPQYDSVLAFEPTGWTHNNSVSTVANIRPKRHGNITVYGIP 319
Query: 285 YSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
YS+HS +TE++ F+ +QP+ I V++ S
Sbjct: 320 YSEHSSYTEMKRFVQFLQPAKILPTVNNGS 349
>gi|194042051|ref|XP_001926894.1| PREDICTED: DNA cross-link repair 1A protein [Sus scrofa]
Length = 1058
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 146/321 (45%), Gaps = 64/321 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L I +
Sbjct: 741 EGCTAYFLTHFHSDHYAGLSKNFT-FPVYCSEVTGNLLKSKL-HVQEQYIHPLPIDTECV 798
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
++ V +V+ +DANHCPG +VM+LF G +L+TGDFR + + ER+
Sbjct: 799 VNGV----------KVVLLDANHCPG----AVMVLFHLPNGHVILHTGDFRADPTMERS- 843
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L V LYLD TYC+ Y+FPS++ A + + + P L
Sbjct: 844 --------LLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPHTLVVCG 895
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ + +P + + D SL + P + I
Sbjct: 896 TYSIGKEKVFLAIADVLGSKVGMSKEKYNTLRCLNIPEINSFITTDMCNSLVHLLPMMQI 955
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV---DRFHKYIYS 282
GL +K K GG L +R TG T + KL ++ V + + IY
Sbjct: 956 NFKGLQNHLK--KFGGKYNQIL------AFRPTGWTHSNKLT-SIADVLPQTKGNISIYG 1006
Query: 283 VPYSDHSCFTEIEEFLNLVQP 303
+PYS+HS + E++ F+ ++P
Sbjct: 1007 IPYSEHSSYPEMKRFVQWLKP 1027
>gi|51091343|dbj|BAD36078.1| putative SNM1 [Oryza sativa Japonica Group]
gi|51091393|dbj|BAD36136.1| putative SNM1 [Oryza sativa Japonica Group]
Length = 1024
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 145/339 (42%), Gaps = 102/339 (30%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G ++CS +TA L K G+ + VL + +I+ V+
Sbjct: 716 WFLTHFHVDHYQGLTKSFCHGKIYCSSVTANLVHYKI-GIPWDRLHVLPLNEKITIAGVN 774
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
+ DANHCPG +V++LF G +L+TGDFR+ +E+ N
Sbjct: 775 ----------LTCFDANHCPG----AVIILFEPSNGKAVLHTGDFRFS-----SEMANN- 814
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ-------------------------- 170
+ L+ + L LD TYCN Y FP++E+ Q
Sbjct: 815 --RVLQSSPIHTLILDTTYCNPRYDFPTQEIVIQFVIEAIQAEAFNPKTLFLIGSYTIGK 872
Query: 171 -------------QIWVWPERLQTMHLLGF-HDI---FTTKTSLTRVRAVPRYSF-SIDT 212
+I+V +LQ + LG +I FT + + + VP ++ S
Sbjct: 873 ERLYMEVARLLQKKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVVPMWTLASFKR 932
Query: 213 LESLNTMHPT-----IGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLK 267
++ L+T + + P+G W KG PG KW+
Sbjct: 933 MKYLSTQYADRFDLIVAFCPTG--WSFG--KGKKRTPG-------RKWQQ---------- 971
Query: 268 EALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
G++ R Y VPYS+HS FTE+ EF+ + P +I
Sbjct: 972 ---GAIIR-----YEVPYSEHSSFTELREFVRFISPEHI 1002
>gi|355682943|gb|AER97011.1| DNA cross-link repair 1A [Mustela putorius furo]
Length = 504
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 143/324 (44%), Gaps = 65/324 (20%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 189 EGCTAYFLTHFHSDHYAGLSKNFT-FPIYCSEITGNLLKSKL-HIQKQYIHPLPMDTECI 246
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
++ ++V+ +DANHCPG +VM+LF G LL+TGDFR + + ER+
Sbjct: 247 VN----------GIKVVLLDANHCPG----AVMILFHLPNGNVLLHTGDFRADPTMERSR 292
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L + LYLD TYC+ Y+FPS++ A + + + P L
Sbjct: 293 ---------LAGQKIHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPRVLIVCG 343
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNT---------MHPTIGI 225
+ L D+ +K +++ + +I L S T + P + I
Sbjct: 344 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPELNSFITTDMCSSRVHLLPMMQI 403
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQS-KWRATGGTQTEKLKEALGSV--DRFHKYIYS 282
L +K K GG YQ +R TG T + KL + + + IY
Sbjct: 404 NFKALQSHLK--KCGG--------KYQILAFRPTGWTHSNKLTRIADIIPQTKGNISIYG 453
Query: 283 VPYSDHSCFTEIEEFLNLVQPSNI 306
+PYS+HS + E++ F+ ++P I
Sbjct: 454 IPYSEHSSYLEMKRFVQWLKPQKI 477
>gi|340372739|ref|XP_003384901.1| PREDICTED: 5' exonuclease Apollo-like [Amphimedon queenslandica]
Length = 540
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 149/356 (41%), Gaps = 98/356 (27%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD + S ++FLTH H+DH GL S++ + ++C+ LT +L L +D L
Sbjct: 19 IAVDYFHRPSLPARTLFFLTHSHADHLYGLDSSFDQT-IYCTSLTKQLVLLHI-SIDPDL 76
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
+ L+ + V P + F+ V ID+ HCPG S M LF G FG +L+TGDF
Sbjct: 77 LVELEFDEPRQLQVDCPGN---VFISVTTIDSCHCPG----SAMFLFEGYFGTILHTGDF 129
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ---------- 171
R ++ + L+K L+ DV LYLDNTY + + FP R V +
Sbjct: 130 RLSP-----KLLAHPLLKNLEPDV---LYLDNTYNDPIFDFPERSVTCDKVVKLVKDNPH 181
Query: 172 --------------------------IWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPR 205
I V E+ + M +LG H + + + +V VP
Sbjct: 182 LRTFIAFNKLGKEDLLVNIVRSTDYAIGVSSEQYKKMEILGLHHVCSLDSDQCQVIVVPF 241
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
Y+ + + PT I+P+ S F + +A
Sbjct: 242 YAVTEANVNRWINECPTQVIIPT-----------------SRFEGSEHPLKA-------- 276
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI-----RGIVSSSSCY 316
+ ++ V YSDH + E+ +F+ LV+P +I R VS+ SC+
Sbjct: 277 -----------YPCVHIVQYSDHCSYKELYQFVELVKPVSIHPVVQRDKVSNMSCF 321
>gi|354501727|ref|XP_003512940.1| PREDICTED: DNA cross-link repair 1A protein [Cricetulus griseus]
gi|344257217|gb|EGW13321.1| DNA cross-link repair 1A protein [Cricetulus griseus]
Length = 1022
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 141/317 (44%), Gaps = 50/317 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + R P++CS +T L K + I L + +
Sbjct: 705 EGCTAYFLTHFHSDHYAGLSKDFER-PIYCSEITGNLVKKKL-RVQEQYIHQLPMDTECI 762
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
+ V+V+ +DANHCPG + M+LFR G +L+TGDFR + S ER+
Sbjct: 763 VD----------GVKVVLLDANHCPG----ASMILFRPPNGAAILHTGDFRADPSMERS- 807
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L V LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 808 --------LLAGQKVHTLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCG 859
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVV 234
+ L D+ +K +++ + ++ + SL T ++ LP +
Sbjct: 860 TYCIGKEKVFLAIADVLGSKVGMSQEKYKTLKCLNLPDVNSLITTDMCSSLV-HLLPMMQ 918
Query: 235 KPLKGGGSLPGSLFSSYQS--KWRATGGTQTEKLKEALGSVDRFHK---YIYSVPYSDHS 289
KG S Y +R TG T + ++ ++ + K IY +PYS+HS
Sbjct: 919 INFKGLQSHLEKCDGKYDQILAFRPTGWTHSNRIT-SIADITPQKKGKISIYGIPYSEHS 977
Query: 290 CFTEIEEFLNLVQPSNI 306
+ E++ F+ ++P I
Sbjct: 978 SYLEMKRFVQWLKPQKI 994
>gi|125605833|gb|EAZ44869.1| hypothetical protein OsJ_29509 [Oryza sativa Japonica Group]
Length = 967
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 145/339 (42%), Gaps = 102/339 (30%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G ++CS +TA L K G+ + VL + +I+ V+
Sbjct: 659 WFLTHFHVDHYQGLTKSFCHGKIYCSSVTANLVHYKI-GIPWDRLHVLPLNEKITIAGVN 717
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
+ DANHCPG +V++LF G +L+TGDFR+ +E+ N
Sbjct: 718 ----------LTCFDANHCPG----AVIILFEPSNGKAVLHTGDFRFS-----SEMANN- 757
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ-------------------------- 170
+ L+ + L LD TYCN Y FP++E+ Q
Sbjct: 758 --RVLQSSPIHTLILDTTYCNPRYDFPTQEIVIQFVIEAIQAEAFNPKTLFLIGSYTIGK 815
Query: 171 -------------QIWVWPERLQTMHLLGF-HDI---FTTKTSLTRVRAVPRYSF-SIDT 212
+I+V +LQ + LG +I FT + + + VP ++ S
Sbjct: 816 ERLYMEVARLLQKKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVVPMWTLASFKR 875
Query: 213 LESLNTMHPT-----IGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLK 267
++ L+T + + P+G W KG PG KW+
Sbjct: 876 MKYLSTQYADRFDLIVAFCPTG--WSFG--KGKKRTPG-------RKWQQ---------- 914
Query: 268 EALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
G++ R Y VPYS+HS FTE+ EF+ + P +I
Sbjct: 915 ---GAIIR-----YEVPYSEHSSFTELREFVRFISPEHI 945
>gi|125563862|gb|EAZ09242.1| hypothetical protein OsI_31515 [Oryza sativa Indica Group]
Length = 966
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 145/339 (42%), Gaps = 102/339 (30%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G ++CS +TA L K G+ + VL + +I+ V+
Sbjct: 658 WFLTHFHVDHYQGLTKSFCHGKIYCSSVTANLVHYKI-GIPWDRLHVLPLNEKITIAGVN 716
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
+ DANHCPG +V++LF G +L+TGDFR+ +E+ N
Sbjct: 717 ----------LTCFDANHCPG----AVIILFEPSNGKAVLHTGDFRFS-----SEMANN- 756
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ-------------------------- 170
+ L+ + L LD TYCN Y FP++E+ Q
Sbjct: 757 --RVLQSSPIHTLILDTTYCNPRYDFPTQEIVIQFVIEAIQAEAFNPKTLFLIGSYTIGK 814
Query: 171 -------------QIWVWPERLQTMHLLGF-HDI---FTTKTSLTRVRAVPRYSF-SIDT 212
+I+V +LQ + LG +I FT + + + VP ++ S
Sbjct: 815 ERLYMEVARLLQKKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVVPMWTLASFKR 874
Query: 213 LESLNTMHPT-----IGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLK 267
++ L+T + + P+G W KG PG KW+
Sbjct: 875 MKYLSTQYADRFDLIVAFCPTG--WSFG--KGKKRTPG-------RKWQQ---------- 913
Query: 268 EALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
G++ R Y VPYS+HS FTE+ EF+ + P +I
Sbjct: 914 ---GAIIR-----YEVPYSEHSSFTELREFVRFISPEHI 944
>gi|410976105|ref|XP_003994466.1| PREDICTED: DNA cross-link repair 1A protein [Felis catus]
Length = 1049
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 143/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + + L + +
Sbjct: 732 EGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEITGNLLKSKL-HMQKQYVHPLPMDTECI 789
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
++ V+VI +DANHCPG +VM+LF G LL+TGDFR + ER+
Sbjct: 790 VN----------GVKVILLDANHCPG----AVMILFYLPNGKVLLHTGDFRAHPTMERS- 834
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L V LYLD TYC+ Y+FPS++ A + + + P L
Sbjct: 835 --------LLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPRVLVVCG 886
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESL------NTMHPTIGIMPS 228
+ L D+ +K +++ + +I L SL N++ + +M
Sbjct: 887 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPELNSLITTDMCNSLVHLLPMMQI 946
Query: 229 GLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVD-----RFHKYIYSV 283
+ LK G + + +R TG T + KL G D + + IY +
Sbjct: 947 NFKALQSHLKKCGGKYDQILA-----FRPTGWTHSNKL---TGIADIIPQTKGNISIYGI 998
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 999 PYSEHSSYLEMKRFVQWLKPQKI 1021
>gi|222423539|dbj|BAH19739.1| AT3G26680 [Arabidopsis thaliana]
Length = 484
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 155/328 (47%), Gaps = 53/328 (16%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G YFLTH H+DH GL+ AW+ GP++CS LT++L ++ S I L++ ++
Sbjct: 167 QGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLL-RLSLSVNPSSIHPLELDVEYT 225
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
I+ ++V I+ANHCPG LL D C L+TGDFR + +
Sbjct: 226 ING----------IKVTLIEANHCPGAALIHFRLL---DGTCYLHTGDFRASKQMQTHPL 272
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE-VAAQQIWVWPERL----QTMHLLGF 187
N V+ +LYLD TYCN Y FPS+E V + + + + L +T+ ++G
Sbjct: 273 LFNQRVR--------VLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGS 324
Query: 188 HDIFTTKTSLTRVRAVP------------RYSFSIDTLE---SLNTMHPTIGIMPSG--- 229
+ I L +A+ SF D + S + + ++P
Sbjct: 325 YSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKATCLHVLPMSSLK 384
Query: 230 LPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV---DRFHKYIYSVPYS 286
+ + + LK G++ + +R TG T +EK+ E L + R IY VPYS
Sbjct: 385 VERLDEHLKIYREQYGAVLA-----FRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYS 439
Query: 287 DHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
+HS FTE+ EF+ ++P I V++ +
Sbjct: 440 EHSSFTELREFVQFLRPDKIIPTVNNGN 467
>gi|357508501|ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
gi|87241310|gb|ABD33168.1| DNA repair metallo-beta-lactamase [Medicago truncatula]
gi|355499554|gb|AES80757.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
Length = 511
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 67/327 (20%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
E YFL+H H+DH GLS W+ GP++CS LT +L + ++ S I L+ + +
Sbjct: 194 EECSAYFLSHFHADHYGGLSKKWSHGPIYCSPLTGRLVQMCL-YVNPSYICPLEFDTEYV 252
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
I ++V IDANHCPG + ++ F G C L+TGDFR +
Sbjct: 253 IDG----------IKVTLIDANHCPG----AALIHFELPNGQCYLHTGDFRACKLMQDYH 298
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERLQTMH 183
+ N V++LYLD TYCN Y FPS++ + + +P +T+
Sbjct: 299 LFVNKR--------VNVLYLDTTYCNPKYKFPSKDDVLNYVVKITNNHLKKYP---RTLV 347
Query: 184 LLGFHDIFTTKTSLTRVRAV-------------------PRYSFSIDTLESLNTMH--PT 222
++G + I L +A+ P YS + T + +H P
Sbjct: 348 VVGAYSIGKECVYLAISKALGVKIHVNASRRRILLAYDCPDYSDRLCTNGNNTLLHVLPM 407
Query: 223 IGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALG---SVDRFHKY 279
+ L +K K F+S + +R TG T +EK+ L V +
Sbjct: 408 SSLRIETLKEYLKTYK-------EQFTSVLA-FRPTGWTFSEKIGNDLALIKPVSNGNIT 459
Query: 280 IYSVPYSDHSCFTEIEEFLNLVQPSNI 306
Y VPYS+HS FTE+ +F+ ++P I
Sbjct: 460 TYGVPYSEHSSFTELRDFVQFLRPDKI 486
>gi|395828054|ref|XP_003787201.1| PREDICTED: DNA cross-link repair 1A protein [Otolemur garnettii]
Length = 1042
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 143/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 725 EGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKL-HVQEQYIHPLPMDTECV 782
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V+V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 783 VN----------GVKVVLLDANHCPG----AVMILFYLPNGTIILHTGDFRADPSMERS- 827
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L V LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 828 --------LLAGQKVHTLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPCALVVCG 879
Query: 180 -----QTMHLLGFHDIFTTKTSLT-------RVRAVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ R +P + + D SL + P + I
Sbjct: 880 TYSIGKEKVFLAIADVLCSKVAMSQEKYKTLRCLNIPEINSLITTDMCSSLVHLLPMMQI 939
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRF--HKYIYSV 283
L +K K GG L +R TG T + KL + + + IY +
Sbjct: 940 NFKDLQSHLK--KCGGKYDQIL------AFRPTGWTHSNKLTSIADVIPKTKGNISIYGI 991
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 992 PYSEHSSYLEMKRFVQWLKPQKI 1014
>gi|402590499|gb|EJW84429.1| hypothetical protein WUBG_04661 [Wuchereria bancrofti]
Length = 561
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 115/259 (44%), Gaps = 71/259 (27%)
Query: 3 KGLISVDRWTEGSQV--YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPL-------K 53
G I+VD++ + + + YFLTH HSDH + + W G ++CS +TA++ P+ K
Sbjct: 9 NGFIAVDKFPKNAAIKYYFLTHAHSDHYGAVGNKWNNGNIYCSPVTARVLPIVTQRHKSK 68
Query: 54 FPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGD-- 111
G+ +I LD+ WH + S V+ +DANH PG SVM LF GD
Sbjct: 69 CGGIRSHIIHALDLNVWHYMDGFS----------VMLLDANHIPG----SVMFLFEGDRI 114
Query: 112 -FGCLLYTGDFRWEASNERAEIGRNTLVKA-LKDDVVDILYLDNTYCNSS-YAFPSREVA 168
G +L+TGDFR + ++ +N + L + ++ +YLD TY N + FPSRE +
Sbjct: 115 SEGRILFTGDFRAD-----IQLYKNVFAASVLHETSLNTIYLDTTYINCTREEFPSREAS 169
Query: 169 AQQ--------------------------------------IWVWPERLQTMHLLGFHDI 190
+ + IWV R Q +LG +
Sbjct: 170 SAEMCNVLRKLFDGFKSVTIMVPKVGREQLLVDIAVEFKCKIWVDYIRFQVAEILGLSEY 229
Query: 191 FTTKTSLTRVRAVPRYSFS 209
FTTK T + R + S
Sbjct: 230 FTTKKEDTSIWTCTRQNIS 248
>gi|15231597|ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|30688447|ref|NP_850635.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|79313637|ref|NP_001030773.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|73621911|sp|Q38961.1|SNM1_ARATH RecName: Full=DNA cross-link repair protein SNM1; Short=AtSNM1
gi|1402886|emb|CAA66817.1| hypothetical protein [Arabidopsis thaliana]
gi|11994302|dbj|BAB01732.1| unnamed protein product [Arabidopsis thaliana]
gi|26449933|dbj|BAC42087.1| unknown protein [Arabidopsis thaliana]
gi|28827378|gb|AAO50533.1| unknown protein [Arabidopsis thaliana]
gi|332643675|gb|AEE77196.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|332643676|gb|AEE77197.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|332643677|gb|AEE77198.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
Length = 484
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 155/328 (47%), Gaps = 53/328 (16%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G YFLTH H+DH GL+ AW+ GP++CS LT++L ++ S I L++ ++
Sbjct: 167 QGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLL-RLSLSVNPSSIHPLELDVEYT 225
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
I+ ++V I+ANHCPG LL D C L+TGDFR + +
Sbjct: 226 ING----------IKVTLIEANHCPGAALIHFRLL---DGTCYLHTGDFRASKQMQTHPL 272
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE-VAAQQIWVWPERL----QTMHLLGF 187
L + V +LYLD TYCN Y FPS+E V + + + + L +T+ ++G
Sbjct: 273 --------LFNQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGS 324
Query: 188 HDIFTTKTSLTRVRAVP------------RYSFSIDTLE---SLNTMHPTIGIMPSG--- 229
+ I L +A+ SF D + S + + ++P
Sbjct: 325 YSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKATCLHVLPMSSLK 384
Query: 230 LPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV---DRFHKYIYSVPYS 286
+ + + LK G++ + +R TG T +EK+ E L + R IY VPYS
Sbjct: 385 VERLDEHLKIYREQYGAVLA-----FRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYS 439
Query: 287 DHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
+HS FTE+ EF+ ++P I V++ +
Sbjct: 440 EHSSFTELREFVQFLRPDKIIPTVNNGN 467
>gi|1495267|emb|CAA66406.1| orf12 [Arabidopsis thaliana]
Length = 484
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 155/328 (47%), Gaps = 53/328 (16%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G YFLTH H+DH GL+ AW+ GP++CS LT++L ++ S I L++ ++
Sbjct: 167 QGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLL-RLSLSVNPSSIHPLELDVEYT 225
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
I+ ++V I+ANHCPG LL D C L+TGDFR + +
Sbjct: 226 ING----------IKVTLIEANHCPGAALIHFRLL---DGTCYLHTGDFRASKQMQTHPL 272
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE-VAAQQIWVWPERL----QTMHLLGF 187
L + V +LYLD TYCN Y FPS+E V + + + + L +T+ ++G
Sbjct: 273 --------LFNQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGS 324
Query: 188 HDIFTTKTSLTRVRAVP------------RYSFSIDTLE---SLNTMHPTIGIMPSG--- 229
+ I L +A+ SF D + S + + ++P
Sbjct: 325 YSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKATCLHVLPMSSLK 384
Query: 230 LPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV---DRFHKYIYSVPYS 286
+ + + LK G++ + +R TG T +EK+ E L + R IY VPYS
Sbjct: 385 VERLDEHLKIYREQYGAVLA-----FRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYS 439
Query: 287 DHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
+HS FTE+ EF+ ++P I V++ +
Sbjct: 440 EHSSFTELREFVQFLRPDKIIPTVNNGN 467
>gi|168023878|ref|XP_001764464.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684328|gb|EDQ70731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 603
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 93/176 (52%), Gaps = 23/176 (13%)
Query: 7 SVDRWTEGSQ---VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIR 63
SVD WTE + +FLTH H DHT G+ S P++C+ LT KL ++P L SL +
Sbjct: 11 SVDTWTEMAMRKPFHFLTHAHKDHTVGIDSHGTH-PIYCTSLTEKLVLRRYPTLHPSLFK 69
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
L+IG ++ GE V A DANHCPG ++MLLF G FG LL+TGD R
Sbjct: 70 NLEIGEPKLLA------GEDQAFTVTAFDANHCPG----AIMLLFEGSFGTLLHTGDCRL 119
Query: 124 --EASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--WVW 175
E N+ + +AL D +YLD T+ N + PS E A +Q+ +W
Sbjct: 120 TIECLNQLPRQFISGSGRAL-----DCVYLDCTFGNVTMVMPSIEEAIEQVKRCIW 170
>gi|301755506|ref|XP_002913597.1| PREDICTED: DNA cross-link repair 1A protein-like [Ailuropoda
melanoleuca]
gi|281347740|gb|EFB23324.1| hypothetical protein PANDA_001409 [Ailuropoda melanoleuca]
Length = 1049
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 144/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + + L + +
Sbjct: 732 EGCTAYFLTHFHSDHYAGLSKNFT-FPIYCSEITGNLLRSKL-HVQKQYVHPLPMDTECI 789
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
++ V+V+ +DANHCPG +VM+LF G LL+TGDFR + + ER+
Sbjct: 790 VN----------GVKVVLLDANHCPG----AVMILFYLPNGNVLLHTGDFRADPTMERSR 835
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L V LYLD TYC+ Y+FPS++ A + + + P L
Sbjct: 836 ---------LAGQRVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPRVLVVCG 886
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ + +P + + D SL + P + I
Sbjct: 887 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPELNSFITTDMCSSLVHLLPMMQI 946
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
L +K K GG L +R TG T + KL + + + IY +
Sbjct: 947 NFKALQSHLK--KCGGKYDQVL------AFRPTGWTHSNKLTSIADIIPQTKGNISIYGI 998
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + EI+ F+ ++P I
Sbjct: 999 PYSEHSSYLEIKRFVQWLKPQKI 1021
>gi|307108579|gb|EFN56819.1| hypothetical protein CHLNCDRAFT_144365 [Chlorella variabilis]
Length = 520
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 24/151 (15%)
Query: 16 QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
+ +FLTH+HSDHT GLS +++ GP++CS +TA+L G+ LIR+L + +I
Sbjct: 29 RAFFLTHMHSDHTTGLSRSFSAGPIYCSPITARLLRCDM-GIRPDLIRILPLDLPTTIC- 86
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRN 135
VEV+ IDANHCPG +VM LFR +L+TGD RW+A +
Sbjct: 87 ---------GVEVVPIDANHCPG----AVMFLFRAPT-TILHTGDVRWQAGMAQH----- 127
Query: 136 TLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
AL VD+L LD TY + FP +E
Sbjct: 128 ---AALTGRQVDVLMLDTTYSQRKWTFPPQE 155
>gi|156390186|ref|XP_001635152.1| predicted protein [Nematostella vectensis]
gi|156222243|gb|EDO43089.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 145/324 (44%), Gaps = 51/324 (15%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G +VYFL+H H DH GL ++ P++CS++TA L K + I+ L + +
Sbjct: 25 GIKVYFLSHFHYDHYGGLKKGFSH-PIYCSKVTANLVESKI-KVSQRYIKALPMDT---- 78
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEI 132
P +K V+V +DANHCPG +V+LLF G +L+TGDFR AS E
Sbjct: 79 ----PVIVDK--VQVTLLDANHCPG----AVLLLFELPNGKTILHTGDFR--ASREMES- 125
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERLQT--M 182
AL + +D LYLD TYC+ Y FP +E AAQ + P+ L
Sbjct: 126 -----YPALANKTIDTLYLDTTYCDPQYTFPKQEETINFAVTKAAQAVSENPKTLIVCGT 180
Query: 183 HLLGFHDIF--TTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGG 240
+ +G +F K +V +D+LES + + I S V P+
Sbjct: 181 YTIGKEKVFLAIAKELGCKVTVQSDKKRILDSLES-DFIQSVITTDKSEGRIHVLPM--- 236
Query: 241 GSLPGSLFSSYQSKWRA----------TGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSC 290
G L SSY +++ TG A V + IY VPYS+HS
Sbjct: 237 GKLNHQHLSSYMDQFKGKFTRVVAFKPTGWEHKSGPLSATRPVTKGPISIYGVPYSEHSS 296
Query: 291 FTEIEEFLNLVQPSNIRGIVSSSS 314
+ E++ F+ +P+ I V+ S
Sbjct: 297 YEEMKRFVQFTRPTKIVPTVNVHS 320
>gi|242075620|ref|XP_002447746.1| hypothetical protein SORBIDRAFT_06g014970 [Sorghum bicolor]
gi|241938929|gb|EES12074.1| hypothetical protein SORBIDRAFT_06g014970 [Sorghum bicolor]
Length = 496
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 148/325 (45%), Gaps = 63/325 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H H DH GL+ W GP++CS LTA+L + ++ I L++ + +
Sbjct: 178 EGCSAYFLSHFHHDHYGGLTKKWCHGPIYCSALTARLVKMCL-SVNSDYIYPLELDTNYV 236
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERAE 131
I V+ V ++ANHCPG + ++ F+ D L+TGDFR S +
Sbjct: 237 IEGVT----------VTLLEANHCPG----AALIHFQLSDGKTYLHTGDFRASKSMQ--- 279
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE------VAAQQIWVWPERLQTMHLL 185
L L+ V+++YLD TYCN Y FP +E V Q ++ ++ +T+ ++
Sbjct: 280 -----LHPLLQRGRVNLVYLDTTYCNPKYKFPPQEDVIDFVVRTAQRYL-KKQPKTLIVV 333
Query: 186 GFHDIFTTKTSLTRVRA--VPRY----------SFSIDTLE----SLNTMHPTIGIMPSG 229
G + I L +A VP Y SF L S N P + ++P G
Sbjct: 334 GAYSIGKENVYLAISQALEVPIYTDASRRRILHSFGWSDLSKRICSCNQSSP-LHVLPLG 392
Query: 230 LPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEAL--------GSVDRFHKYIY 281
K +L G + +R TG T +E + L GSV IY
Sbjct: 393 SVNHENLKKYLETLSGRFLAVL--AFRPTGWTFSEATGKHLDLIKPSCNGSVT-----IY 445
Query: 282 SVPYSDHSCFTEIEEFLNLVQPSNI 306
VPYS+HS FTE+ +F+ ++P +
Sbjct: 446 GVPYSEHSSFTELRDFVMFLRPQKV 470
>gi|345792823|ref|XP_535018.3| PREDICTED: DNA cross-link repair 1A protein [Canis lupus familiaris]
Length = 1049
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 144/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 732 EGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEITGNLLKSKL-HVQKQYIHPLPMDTECI 789
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
++ V+V+ +DANHCPG +VM+LF G LL+TGDFR + + ER+
Sbjct: 790 VN----------GVKVVLLDANHCPG----AVMILFYLPNGNVLLHTGDFRADPTMERSR 835
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L V LYLD TYC+ Y+FPS++ A + + P L
Sbjct: 836 ---------LAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTRNPRVLVVCG 886
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ ++ ++++ + +P + + D SL + P + I
Sbjct: 887 TYSIGKEKVFLAIADVLGSRVAMSQEKYKTLQCLNIPDLNSFITTDMCNSLVHLLPMMQI 946
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRF--HKYIYSV 283
L +K K GG L +R TG T + +L V + + IY +
Sbjct: 947 NFKALQSHLK--KCGGEFNQIL------AFRPTGWTHSNQLTNIRDIVPQIKGNISIYGI 998
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 999 PYSEHSSYLELKRFVQWLKPQKI 1021
>gi|440798605|gb|ELR19672.1| DNA cross-link repair protein, putative [Acanthamoeba castellanii
str. Neff]
Length = 655
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 143/352 (40%), Gaps = 70/352 (19%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGL-DLSLIRVLDIGSWHS 72
G+ YFLTH H+DH GLS W GPL+CS T +L KFP L + L+ W
Sbjct: 33 GAAAYFLTHFHADHYAGLSKGWKGGPLYCSETTGRLLGHKFPALVEAGLVH----HDWLH 88
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
S V+V DA HCPG SVM LF G FG +TGDFR+ R +
Sbjct: 89 YSAE---------VKVWLTDAGHCPG----SVMFLFEGAFGVYFHTGDFRF----NRGML 131
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSY-AFPSR-----------EVAAQQIWV---WPE 177
+ +A +VD L++D T+C+ + AFP + + AQ + + P
Sbjct: 132 SCPVIKRA--QGMVDKLFIDTTFCSPFWSAFPPKRWRSLTRTLQEQAIAQVLQIISSQPH 189
Query: 178 RLQT---MHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVV 234
+Q +LG D+ + + F D E L + + +
Sbjct: 190 NVQVYLECEMLGTQDVLVAVAEKFKTKI-----FVED--EKLRESFKCVPELKRAKIFAA 242
Query: 235 KPLKGGGSL---------------PGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKY 279
PL+ L P +L+ ++W G + AL + +
Sbjct: 243 DPLESRFHLLKNQRYTNRTEVLLEPDALYIRPSTQWFGQQGNG--RGNPALYQTRPCYAH 300
Query: 280 -IYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLCRAN 330
I+ V YS HS F E+E F++ +QP RG+V + C L C N
Sbjct: 301 GIWHVLYSIHSSFEELEVFVSFLQP---RGLVPLTECSAVALKRLTSSCLTN 349
>gi|170594001|ref|XP_001901752.1| DNA ligase I [Brugia malayi]
gi|158590696|gb|EDP29311.1| DNA ligase I, putative [Brugia malayi]
Length = 608
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 114/254 (44%), Gaps = 71/254 (27%)
Query: 4 GLISVDRWTEGSQV--YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPL-------KF 54
G I+VD++ + + + YFLTH HSDH + + W G ++CS +TA + P+ KF
Sbjct: 10 GFIAVDKFPKNAAIKYYFLTHAHSDHYGAIDNKWNNGNIYCSPVTAHVLPIVTQRHKSKF 69
Query: 55 PGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGD--- 111
G+ +I LD+ WH + S V+ +DANH PG SVM LF GD
Sbjct: 70 GGIRSHIIHALDLNVWHYMDGFS----------VMLLDANHIPG----SVMFLFEGDRIS 115
Query: 112 FGCLLYTGDFRWEASNERAEIGRNTLVKA-LKDDVVDILYLDNTYCNSS-YAFPSR---- 165
G +L+TGDFR + ++ +N L + L++ + +YLD TY N + FPSR
Sbjct: 116 EGRILFTGDFRAD-----IQLYKNVLTASVLRERNLSTIYLDTTYINCTREEFPSRGASS 170
Query: 166 -------------------------------EVAAQ---QIWVWPERLQTMHLLGFHDIF 191
+VA + +IWV R Q +LG + F
Sbjct: 171 AEMCNVLRKLFDGSKSVTIMVPKVGREQLLVDVAIEFKCKIWVDYIRFQVAGILGLSEYF 230
Query: 192 TTKTSLTRVRAVPR 205
TT T + R
Sbjct: 231 TTNKKETSIWTCTR 244
>gi|351706821|gb|EHB09740.1| DNA cross-link repair 1A protein [Heterocephalus glaber]
Length = 1039
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 143/325 (44%), Gaps = 56/325 (17%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 722 EGCTAYFLTHFHSDHYAGLSKN-STFPVYCSEITGNLLKSKL-HVQEQYIHPLPMDTKCI 779
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
++ V+VI +DANHCPG +++L + + +L+TGDFR + S ER+
Sbjct: 780 VN----------GVKVILLDANHCPGA---AMVLFYLPNGTVVLHTGDFRADPSMERS-- 824
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL----- 179
L V LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 825 -------LLAGQKVHTLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALIICGT 877
Query: 180 ----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESL------NTMHPTIGIMPSG 229
+ L D+ +K +++ + +I + SL N++ + +M
Sbjct: 878 YCIGKEKVFLAIADVLGSKVGMSKEKYETLRCLNISEINSLITTDMCNSLVHLLPMMQIN 937
Query: 230 LPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHK---YIYSVPYS 286
+ LK G + + +R TG T + KL + V K IY +PYS
Sbjct: 938 FKSLQSHLKKYGEKYDQILA-----FRPTGWTHSNKLT-CIADVTPQTKGNISIYGIPYS 991
Query: 287 DHSCFTEIEEFLNLVQPSNIRGIVS 311
+HS + E++ F+ ++P I V+
Sbjct: 992 EHSSYLEMKRFVQWLKPQKIIPTVN 1016
>gi|413918214|gb|AFW58146.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
gi|413918215|gb|AFW58147.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
Length = 505
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 143/319 (44%), Gaps = 51/319 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H H DH GL+ W GP++CS LTA+L + ++ I L++ + +
Sbjct: 187 EGCSAYFLSHFHHDHYGGLTKKWCHGPIYCSALTARLVKMCL-SVNSDYICPLELDTEYV 245
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERAE 131
I V+ V ++ANHCPG + ++ FR D L+TGDFR + +
Sbjct: 246 IEGVT----------VTLLEANHCPG----AALIHFRLSDGKTCLHTGDFRASKTMQSHP 291
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE-----VAAQQIWVWPERLQTMHLLG 186
+ L+ V+++YLD TYCN Y FP +E V ++ +T+ ++G
Sbjct: 292 L--------LQRGRVNLVYLDTTYCNPKYKFPPQEDVIDFVVRTTRRYLKKQPKTLIVVG 343
Query: 187 FHDIFTTKTSLTRVRAVPR------------YSFSIDTLE----SLNTMHPTIGIMPSGL 230
+ I L +A+ YSF L S N ++ ++P G
Sbjct: 344 AYSIGKENVYLAISQALEAHIYTDASRRRILYSFGWPDLSKRLCSCNQSS-SLHVLPLGS 402
Query: 231 PWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV---DRFHKYIYSVPYSD 287
K +L G + +R TG T +E + L + + IY VPYS+
Sbjct: 403 INHENLKKYLETLNGRFLAVLA--FRPTGWTFSEATGKHLDLIKPSSNANVTIYGVPYSE 460
Query: 288 HSCFTEIEEFLNLVQPSNI 306
HS FTE+ +F+ ++P I
Sbjct: 461 HSSFTELRDFVMFLKPQKI 479
>gi|66910826|gb|AAH97815.1| LOC733261 protein [Xenopus laevis]
Length = 526
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 142/318 (44%), Gaps = 51/318 (16%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GL+ + R P++CS++T L K ++ I L + +
Sbjct: 206 EGCSAYFLTHFHSDHYGGLTKKF-RFPIYCSKITGNLVQNKL-RVESEFINTLPMNTECV 263
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ + V+ ++ANHCPG +V+LLFR G +L+TGDFR + S E
Sbjct: 264 VNGI----------RVVLLEANHCPG----AVLLLFRLPNGTSVLHTGDFRADRSMES-- 307
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
AL V LYLD TYC+ Y FP ++ +A + + ++P L
Sbjct: 308 ------YPALIGQRVHTLYLDTTYCSPEYTFPPQQETIQFAVNIAFEMVTLYPCTLVVCG 361
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTM--HPTIGIMPSGLPW 232
+ L D+ K +++ + + + SL T H T + LP
Sbjct: 362 TYSVGKEKVFLAIADVLGCKVCMSQDKYKTMQCLESEDIRSLVTTDWHSTALHV---LPM 418
Query: 233 VVKPLKGGGSLPGSLFSSYQS--KWRATGGTQTEK--LKEALGSVDRFHKYIYSVPYSDH 288
+ KG G Y ++ TG T ++ L + R +Y +PYS+H
Sbjct: 419 MQVNFKGLNVHLGKFPGKYDRVLAFKPTGWTYSDSSVLVADIKPEIRGKVTVYGIPYSEH 478
Query: 289 SCFTEIEEFLNLVQPSNI 306
S ++E++ F+ ++P I
Sbjct: 479 SSYSELKRFVQWLKPQKI 496
>gi|196013719|ref|XP_002116720.1| hypothetical protein TRIADDRAFT_31281 [Trichoplax adhaerens]
gi|190580698|gb|EDV20779.1| hypothetical protein TRIADDRAFT_31281 [Trichoplax adhaerens]
Length = 375
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 143/323 (44%), Gaps = 48/323 (14%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G YFL+H HSDH GL+ + L+C+++TA L + ++ I +L + H
Sbjct: 63 GITAYFLSHFHSDHYYGLNKTF-NAKLYCNKITANLVS-RMLHVEKQYITILPM---HQS 117
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRWEASNERAEI 132
VV VEV +DANHCPG S M +FR G + L+TGDFR E+ +I
Sbjct: 118 VVVDD-------VEVTLLDANHCPG----SAMFVFRLRNGSVHLHTGDFRASEEMEKLDI 166
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE-----VAAQQIWVWPERLQTMHLLGF 187
LK+ V+ LYLD TYC+ SY FPS++ V A + + G
Sbjct: 167 --------LKNSVISELYLDTTYCDPSYDFPSQKFVLDYVLATVTDALKCNKRCLVACGT 218
Query: 188 HDIFTTKTSLTRVRAVPRYSFS------------IDTLESLNTMHPTIGIMPSGLPWVV- 234
+ I K L RA+ ++ I+ ++L T P + W V
Sbjct: 219 YTIGKEKVFLAIARALECKVYAQKNKLGTLQCLEIENFKTLFTSDPHSTFLHVLPIWSVS 278
Query: 235 -KPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHK--YIYSVPYSDHSCF 291
K L+ F ++ TG T T + A G V R + IY VPYS+HS +
Sbjct: 279 AKFLRNYLDQNADQFDC-AIGFKPTGWTHTNNV-TASGIVARQYGSISIYGVPYSEHSSY 336
Query: 292 TEIEEFLNLVQPSNIRGIVSSSS 314
+E+ F+ +P I V+ S
Sbjct: 337 SEMRRFVQFTKPRKIIPTVNVGS 359
>gi|301092745|ref|XP_002997225.1| DNA cross-link repair protein, putative [Phytophthora infestans
T30-4]
gi|262111496|gb|EEY69548.1| DNA cross-link repair protein, putative [Phytophthora infestans
T30-4]
Length = 565
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 152/364 (41%), Gaps = 109/364 (29%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS--W 70
E S +YFLTH HSDH GL+ + G ++C+ +TA+L +++ L + S
Sbjct: 230 ENSSIYFLTHFHSDHYGGLTKNFDCGIIYCNEITARL-----------VVQELGVQSKYI 278
Query: 71 HSISVVSP--SSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFR----- 122
H++ + +P +G V+V +DANHCPG S ++LFR D L+TGDFR
Sbjct: 279 HAVGMNTPVFVAG----VQVTFMDANHCPG----SAIILFRLKDGKTFLHTGDFRFNRKM 330
Query: 123 --WEASNERAEIGRNTLV---KALKDDVVDILYLDNTYCNSSYAFPSREVA--------- 168
+ A G T+ K + + +D +YLD TYCN Y FP+++VA
Sbjct: 331 LEYHALQSHIPTGSETIDHNGKIVGLNRLDGVYLDTTYCNPKYTFPTQQVAIDHALELID 390
Query: 169 ------------------------------AQQIWVWPERLQTMHLLGFHD----IFTTK 194
+++ V +L+ + G+H + TT
Sbjct: 391 KHFKQDKVLYLFGSYTIGKERLFMEIARKFQKKVCVSKTKLKIIETFGWHSQEMKLLTTV 450
Query: 195 TSLTRVRAVPRYSFSIDTLESLNT-----MHPTIGIMPSGLPWVVKPLKGGGSLPGSLFS 249
+ T + V +D L L H + P+G W FS
Sbjct: 451 PTATNLHVVRMQDLQMDNLIVLLAKNRLRFHRIVAFRPTG--WT--------------FS 494
Query: 250 SYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGI 309
+ +T T + G + Y+Y +PYS+HS F E+ +F+ +V P +I
Sbjct: 495 GKNPRSISTCCT------DPSGKI-----YVYGIPYSEHSSFAELCDFVQVVNPVSIIPT 543
Query: 310 VSSS 313
V S+
Sbjct: 544 VLST 547
>gi|403259476|ref|XP_003922238.1| PREDICTED: DNA cross-link repair 1A protein [Saimiri boliviensis
boliviensis]
Length = 1048
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 144/323 (44%), Gaps = 62/323 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 731 EGCTAYFLTHFHSDHYAGLSKHFI-FPVYCSEITGNLLKNKL-HVQEQYIHPLPLETECI 788
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ V+V+ +DANHCPG +VM+LF G +L+TGDFR + S ER+
Sbjct: 789 VN----------GVKVVLLDANHCPG----AVMILFCLPNGTVILHTGDFRADPSMERS- 833
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L + V +LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 834 --------LLANRKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCG 885
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVR-------AVPRYS--FSIDTLESLNTMHPTIGI 225
+ L D+ +K +++ + +P + + D SL + P + I
Sbjct: 886 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQI 945
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV--DRFHKYIYSV 283
L +K K GG L ++ TG T + K + + + IY +
Sbjct: 946 NFKSLQSHLK--KYGGKYDQIL------AFKPTGWTHSNKFTSIADVIPQTKGNISIYGI 997
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS + E++ F+ ++P I
Sbjct: 998 PYSEHSSYLEMKRFVQWLKPQKI 1020
>gi|348578689|ref|XP_003475115.1| PREDICTED: LOW QUALITY PROTEIN: DNA cross-link repair 1A protein-like
[Cavia porcellus]
Length = 1053
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 140/325 (43%), Gaps = 66/325 (20%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L + +
Sbjct: 736 EGCTAYFLTHFHSDHYAGLSKNFT-FPVYCSEITGSLLKNKL-HVQEQYIHTLPMDTECI 793
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF-RGDFGCLLYTGDFRWEASNERAE 131
++ V +VI +DANHCPG + M+LF D +L+TGDFR + S E +
Sbjct: 794 VNGV----------KVILLDANHCPG----AAMILFCLPDGTVVLHTGDFRADPSMEHS- 838
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L V +LYLD TYC+ Y FPS++ A + + P L
Sbjct: 839 --------LLSGHKVHVLYLDTTYCSPEYTFPSQQEVIQFAINTAFETVTQNPRALVVCG 890
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESL------NTMHPTIGIMPS 228
+ L D+ +K ++ + +I + SL N++ + +M
Sbjct: 891 TYCIGKEKVFLAIADVLGSKVGMSEEKYKTLRCLNISEINSLITTDMYNSLVHLLPMMQI 950
Query: 229 GLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLK-------EALGSVDRFHKYIY 281
+ LK G + + +R TG T + KL + G++ IY
Sbjct: 951 NFKNLQSHLKKYGGEYNQILA-----FRPTGWTHSNKLTRIADVTPQTKGNIS-----IY 1000
Query: 282 SVPYSDHSCFTEIEEFLNLVQPSNI 306
+PYS+HS + E++ F+ ++P I
Sbjct: 1001 GIPYSEHSSYLEMKRFVQWLKPQKI 1025
>gi|153791623|ref|NP_001093331.1| uncharacterized protein LOC733261 [Xenopus laevis]
gi|148922160|gb|AAI46633.1| LOC733261 protein [Xenopus laevis]
Length = 932
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 142/318 (44%), Gaps = 51/318 (16%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GL+ + R P++CS++T L K ++ I L + +
Sbjct: 612 EGCSAYFLTHFHSDHYGGLTKKF-RFPIYCSKITGNLVQNKL-RVESEFINTLPMNTECV 669
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ + V+ ++ANHCPG +V+LLFR G +L+TGDFR + S E
Sbjct: 670 VN----------GIRVVLLEANHCPG----AVLLLFRLPNGTSVLHTGDFRADRSMES-- 713
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
AL V LYLD TYC+ Y FP ++ +A + + ++P L
Sbjct: 714 ------YPALIGQRVHTLYLDTTYCSPEYTFPPQQETIQFAVNIAFETVTLYPRTLVVCG 767
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTM--HPTIGIMPSGLPW 232
+ L D+ K +++ + + + SL T H T + LP
Sbjct: 768 TYSVGKEKVFLAIADVLGCKVCMSQDKYKTMQCLESEDIRSLVTTDWHSTALHV---LPM 824
Query: 233 VVKPLKGGGSLPGSLFSSYQS--KWRATGGTQTEK--LKEALGSVDRFHKYIYSVPYSDH 288
+ KG G Y ++ TG T ++ L + R +Y +PYS+H
Sbjct: 825 MQVNFKGLNVHLGKFPGKYDRVLAFKPTGWTYSDSSVLVADIKPEIRGKVTVYGIPYSEH 884
Query: 289 SCFTEIEEFLNLVQPSNI 306
S ++E++ F+ ++P I
Sbjct: 885 SSYSELKRFVQWLKPQKI 902
>gi|344274721|ref|XP_003409163.1| PREDICTED: DNA cross-link repair 1A protein [Loxodonta africana]
Length = 1046
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 148/334 (44%), Gaps = 66/334 (19%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
+VD + GS YFLTH HSDH GLS ++ P++CS +T L K +
Sbjct: 718 FTVDAFQYGSIEDCTAYFLTHFHSDHYAGLSKSFT-SPVYCSEITGNLLKNKL-HVQEQY 775
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGD 120
I L + + ++ V+V+ +DANHCPG +VM+LF G +L+TGD
Sbjct: 776 IHPLPMDTECIVN----------GVKVVLLDANHCPG----AVMVLFCLPNGTVILHTGD 821
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQI 172
FR + + ER+ L + V LYLD TYC+ Y FPS++ A + +
Sbjct: 822 FRADPTMERS---------LLVNWRVHTLYLDTTYCSPEYCFPSQQEVIQFAINTAFEAV 872
Query: 173 WVWPERL---------QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNT----- 218
+ P L + L D+ +K ++R + +I + SL T
Sbjct: 873 TLNPRALVVCGTYSIGKEKVFLAIADVLGSKVGMSREKYTTLQCLNIPEINSLITTDMCS 932
Query: 219 ----MHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSV- 273
+ P + I GL +K K GG L ++ TG T + L +
Sbjct: 933 ALVHLLPMMQINFKGLQKHLK--KYGGKYDQVL------AFQPTGWTHSNTLTSIADIIP 984
Query: 274 -DRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
R + IY +PYS+HS + E++ F+ ++P I
Sbjct: 985 QTRGNISIYGIPYSEHSSYLEMKRFVQWLKPQKI 1018
>gi|56711354|ref|NP_001008683.1| DNA cross-link repair 1A protein [Gallus gallus]
gi|73620743|sp|Q5QJC4.1|DCR1A_CHICK RecName: Full=DNA cross-link repair 1A protein; AltName: Full=SNM1
homolog A; Short=chSNM1A
gi|47156206|gb|AAR27404.1| SNM1A [Gallus gallus]
Length = 972
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 141/316 (44%), Gaps = 47/316 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GL+ + PL+C+++T L K + I VL + +
Sbjct: 652 EGCTAYFLTHFHSDHYCGLTKNFVF-PLYCNKITGNLVKSKL-RVKEQYINVLPMDTECI 709
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
++ ++V+ +DANHCPG + M+LF G +L+TGDFR + S ER
Sbjct: 710 VN----------GIKVLLLDANHCPG----ATMILFYLPSGTAILHTGDFRADPSMER-- 753
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
AL + LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 754 ------YPALIGQKIHTLYLDTTYCSPEYTFPSQQEVIQFAVNTAFEMVTLNPRTLVVCG 807
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVV 234
+ L ++ +K S++R + + SL TM+ G + LP +
Sbjct: 808 TYSIGKEKVFLAIAEVLGSKASMSRDKYKTLQCLESAAVNSLITMN-WDGTLLHILPMMQ 866
Query: 235 KPLKGGGSLPGSLFSSYQS--KWRATGGTQTEKLKEALG--SVDRFHKYIYSVPYSDHSC 290
KG ++ ++ TG T ++ + R + IY +PYS+HS
Sbjct: 867 INFKGLQDHLNKFSENFDQVLAFKPTGWTYSDSCLSVMDIKPQTRGNITIYGIPYSEHSS 926
Query: 291 FTEIEEFLNLVQPSNI 306
+ E++ F+ ++P I
Sbjct: 927 YLEMKRFVQWLKPQKI 942
>gi|328876594|gb|EGG24957.1| DNA repair metallo-beta-lactamase domain-containing protein
[Dictyostelium fasciculatum]
Length = 922
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 143/339 (42%), Gaps = 96/339 (28%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFLTH HSDH GL+ ++ G ++C+ T KL K G+ + I+ + W+ +
Sbjct: 314 YFLTHFHSDHYVGLTKTFSFGNVYCTEETGKLVHSKL-GVQPNFIKAM---PWNRFITIE 369
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTL 137
V V +DANHCPG S M+LF + L+TGDFR+ + +
Sbjct: 370 G-------VRVAMLDANHCPG----SAMILFHVNNEYSLHTGDFRYHHRMKEYPL----- 413
Query: 138 VKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL---QTMHLLGFHDI---- 190
LKD + LYLDNT+C+ +Y FP ++ Q++ ++ +T+ L G + I
Sbjct: 414 ---LKDIAISRLYLDNTFCDPTYVFPPQQEVIQEVVKIIQKENDGRTVFLFGTYTIGKER 470
Query: 191 --------------------------------FTTKTSLTRVRAVPRYSFSIDTLES-LN 217
FTT ++T AVP + D+L L
Sbjct: 471 ILMEVSKNQRKKICVSQDKKQIIACLDLDQTMFTTDETITPFHAVPMGTLRFDSLRGRLE 530
Query: 218 TMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK--LKEALGSVDR 275
+ P G VV +R TG TQ++K + G+V
Sbjct: 531 ALKPRYG-------RVV-------------------AFRPTGWTQSKKSITHQRYGAV-- 562
Query: 276 FHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
+YSV YS+HS + E+ + ++ +P+ I V S+
Sbjct: 563 ---TLYSVAYSEHSSYNELLQCIDHFRPTEIIPTVDCST 598
>gi|345569041|gb|EGX51910.1| hypothetical protein AOL_s00043g644 [Arthrobotrys oligospora ATCC
24927]
Length = 856
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 84/162 (51%), Gaps = 25/162 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG+ YFL+H HSDH GLSS+W GP++CSR+TA L + +D I+ L+
Sbjct: 438 EGTNAYFLSHFHSDHYIGLSSSWNHGPIYCSRVTANLCRRQL-RVDPQYIKELEYEKRTE 496
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ P +G T V IDANHCPG S + LF +L+ GDFR
Sbjct: 497 V----PGTGGAT---VTMIDANHCPG----SSLFLFEKTISSPRGARRQRILHCGDFRAS 545
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
A + R+ L+ + + +DI YLD TY N YAFP ++
Sbjct: 546 AKHL-----RHPLLSVARKNRIDICYLDTTYLNPKYAFPPQK 582
>gi|357153799|ref|XP_003576570.1| PREDICTED: uncharacterized protein LOC100843196 [Brachypodium
distachyon]
Length = 910
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 141/315 (44%), Gaps = 54/315 (17%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH QGL+ ++ G +FCS +TAKL K G+ VL + ++S V+
Sbjct: 602 WFLTHFHLDHYQGLTRSFCHGKIFCSSITAKLVHHKI-GVPWDRFHVLPLNKRITVSGVN 660
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
+ DANHCPG ++++LF G +L+TGDFR+ +E+ N
Sbjct: 661 ----------LTCFDANHCPG----AIIILFEPPSGRAILHTGDFRFS-----SEMANNP 701
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ----QIWVWPERLQTMHLLGFHDIFT 192
+ L+ + L LD TYC+ Y FPS+E Q I +T+ L+G + I
Sbjct: 702 V---LQSSHIHTLILDTTYCSPRYDFPSQETVIQFVIEAIQAEAFNKKTLFLIGSYTIGK 758
Query: 193 TK--TSLTRVRAVPRY--SFSIDTLESL------------NTMHPTIGIMPSGLPWVVKP 236
+ T + R+ Y + + L+ L N I ++P K
Sbjct: 759 ERLFTEVGRLLQKKIYVGAAKLQILKHLELPQEIMPWLTANEAESQIHVVPMWTLASFKR 818
Query: 237 LKGGGSLPGSLF----SSYQSKWR-ATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCF 291
LK S F + + W G +T + G++ R Y VPYS+HS F
Sbjct: 819 LKHLSSQYADRFDLIVAFCPTGWSFGKGKKKTPGRRWQQGTIIR-----YEVPYSEHSSF 873
Query: 292 TEIEEFLNLVQPSNI 306
TE+ EF+ + P +I
Sbjct: 874 TELREFVRFISPEHI 888
>gi|326923949|ref|XP_003208195.1| PREDICTED: DNA cross-link repair 1A protein-like [Meleagris
gallopavo]
Length = 973
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 140/316 (44%), Gaps = 47/316 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GL+ + PL+C+++T L K + I VL + +
Sbjct: 653 EGCTAYFLTHFHSDHYCGLTKNFVF-PLYCNKITGNLVKSKL-QVKEQYINVLPMDTECI 710
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
++ ++V+ +DANHCPG + M+LF G +L+TGDFR + S ER
Sbjct: 711 VN----------GIKVLLLDANHCPG----ATMILFYLPGGTAILHTGDFRADPSMER-- 754
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
AL + LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 755 ------YPALIGQKIHTLYLDTTYCSPEYTFPSQQEVIQFAVNTAFEMVTLNPRTLVVCG 808
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVV 234
+ L ++ +K S++R + + SL +M+ G + LP +
Sbjct: 809 TYSIGKRKSFLAIAEVLGSKASMSRDKYKTLQCLESAAINSLISMN-WDGTLLHILPMMQ 867
Query: 235 KPLKGGGSLPGSLFSSYQS--KWRATGGTQTEKLKEALG--SVDRFHKYIYSVPYSDHSC 290
KG ++ ++ TG T ++ + R IY +PYS+HS
Sbjct: 868 INFKGLQDHLNKFSENFDQVLAFKPTGWTYSDSCLSVMDIKPQTRGKITIYGIPYSEHSS 927
Query: 291 FTEIEEFLNLVQPSNI 306
+ E++ F+ ++P I
Sbjct: 928 YLEMKRFVQWLKPQKI 943
>gi|340369565|ref|XP_003383318.1| PREDICTED: DNA cross-link repair 1A protein-like [Amphimedon
queenslandica]
Length = 556
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 150/328 (45%), Gaps = 50/328 (15%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD ++ GS YFLTH HSDH GL+S +A ++CS++T L +
Sbjct: 217 ITVDAFSYGSINGCTSYFLTHFHSDHYAGLNSRFAHD-IYCSKVTGNL-----------I 264
Query: 62 IRVLDIGSWHSISVVSPSSGEKTF--VEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYT 118
I+ L + S I P EK V+V +DANHCPG SV+LLF+ G +L+T
Sbjct: 265 IQELKVKS--DIVHPLPLKEEKLINGVQVTLLDANHCPG----SVLLLFKLPSGKVILHT 318
Query: 119 GDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR-EVAAQQIWVWPE 177
GDFR S I N + +D L+LD TYC++ Y FP + +V + + + E
Sbjct: 319 GDFRLSHS----MIDHNFFLTT----PIDTLFLDTTYCSARYDFPPQDDVISFVVNIVLE 370
Query: 178 RL----QTMHLLGFHDIFTTK--TSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLP 231
R+ T+ + G + I K T + RY + LES M P P
Sbjct: 371 RMVKDPDTLIVCGAYTIGKEKIFTGCQCYVSKERYKI-LQCLESKEIMSVVNCHSPLASP 429
Query: 232 WVVKPLKGGGSLPGSLFSSYQSK-------WRATGGTQTEKLK--EALGSVDRFHKYIYS 282
V L +L+ + S ++ TG T T K + + V R +Y
Sbjct: 430 IHVMSLNKMNVEELTLYLRHYSTHYTSILAFKPTGWTATTKHNSLQDIRPVVRGVVTMYG 489
Query: 283 VPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
VPYS+HS F+E+ F+ + P + V
Sbjct: 490 VPYSEHSSFSELRTFVQSLSPQRVISTV 517
>gi|384246171|gb|EIE19662.1| hypothetical protein COCSUDRAFT_19473 [Coccomyxa subellipsoidea
C-169]
Length = 168
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 85/162 (52%), Gaps = 15/162 (9%)
Query: 4 GLISVDRWTEGSQVY---FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
G ++VD W + FLTH H+DH QGLS W PL+CS T +L +++P
Sbjct: 13 GCLTVDYWKRSATNVLWAFLTHAHADHLQGLSDTWTGAPLYCSSATRELLLVRWPDFRAP 72
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
LI L++ + +P G T V+V ++ANHC G +VM LF G FG +L+ GD
Sbjct: 73 LIS-LELDETVILRAATP-YGHAT-VQVTPLNANHCLG----AVMFLFEGPFGRVLHCGD 125
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAF 162
FRWE E + L L +D+LYLDNTY + A
Sbjct: 126 FRWE-----QEYQKENLHPILTSAPLDVLYLDNTYAHPRCAL 162
>gi|326497347|dbj|BAK02258.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532736|dbj|BAJ89213.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 638
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 156/355 (43%), Gaps = 45/355 (12%)
Query: 1 MEKGL-ISVDRWTEGSQVY---FLTHLHSDH--TQGLSSAWARGPLFCSRLTAKLFPLKF 54
M +GL +VD W S+ FLTH H DH + G ++ +RLT L F
Sbjct: 5 MPRGLPFAVDTWGPSSRPRRHRFLTHAHRDHLVGAAGAGPGGGGAVYATRLTLSLALRHF 64
Query: 55 PGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC 114
P LD +++ +I V P+ V A DANHCPG +VM LF G+FG
Sbjct: 65 PQLDQG--EFVEVEEGRTIEVDDPAGA----FSVTAYDANHCPG----AVMFLFEGEFGS 114
Query: 115 LLYTGDFRWEASNERAEIGRNTLVKALKDDV--VDILYLDNTYCNSSYAFPSREVAAQQ- 171
+L+TGD R + + + K K++V +D ++LD T+ PS+E+A QQ
Sbjct: 115 ILHTGDCRLTPDCAQ-NLPLKYIAKKGKENVCRLDFVFLDCTFSKCFLKLPSKELAIQQV 173
Query: 172 ---IWVWPER---LQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGI 225
IW P+ LLG +I + + + D ++L+ P I
Sbjct: 174 IACIWKHPDAPFVYLACDLLGHEEILVEVSRTFGSKIYVDVRRNSDCFKALSLTAPEIIT 233
Query: 226 -MPSGLPWVV----------KPLKGG-GSL-PGSLFSSYQSKWRATGGTQTEKLKEALGS 272
PS +V K L+G SL P LF ++W A G Q L EA
Sbjct: 234 DDPSCRFQIVGFHHLYDNASKKLEGARASLQPEPLFIRPSTQWYACGRNQKPSLTEA--Q 291
Query: 273 VDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
D F I+ V +S HS E+E+ + L+QP + I ++ C+ L Y + C
Sbjct: 292 QDDFG--IWHVCFSIHSSRDELEQAMQLLQPQWV--ISTTPPCFAMELSYVKKCC 342
>gi|149634612|ref|XP_001513453.1| PREDICTED: DNA cross-link repair 1A protein [Ornithorhynchus
anatinus]
Length = 994
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 148/313 (47%), Gaps = 49/313 (15%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
YFLTH HSDH GLS + P++C+++T L K + I +L + + + +V
Sbjct: 680 AYFLTHFHSDHYGGLSKKFTY-PIYCNKITGNLVKSKL-KVQEQYIHILPMDT---VCIV 734
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRN 135
+ ++V+ +DANHCPG +VMLLF G +L+TGDFR + S +R
Sbjct: 735 N-------GIKVVLLDANHCPG----AVMLLFYLPNGNVILHTGDFRADPSMKR------ 777
Query: 136 TLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL-------- 179
L + +LYLD TYC+ Y+FPS++ A + I + P L
Sbjct: 778 --YPKLIGQKIHMLYLDTTYCSPEYSFPSQQEVIQFAANTAFESINLNPHTLVICGTYSI 835
Query: 180 -QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMH---PTIGIMPSGLPWVVK 235
+ + ++ +K S+++ + ++ + SL T + ++P + K
Sbjct: 836 GKEKVFIAIAEVLGSKVSMSQEKYKTLRCLELEEVNSLITTDWSSTKVHLLPM-MQITFK 894
Query: 236 PLKGGGSLPGSLFSSYQSKWRATGGTQTEKLK--EALGSVDRFHKYIYSVPYSDHSCFTE 293
L+ S G ++ + ++ TG T +EK + R + IY +PYS+HS + E
Sbjct: 895 GLQSHLSKFGGKYNQVLA-FKPTGWTYSEKSSSISDIKPETRGNITIYGIPYSEHSSYLE 953
Query: 294 IEEFLNLVQPSNI 306
++ F+ ++P I
Sbjct: 954 MKHFVQWLKPQKI 966
>gi|261327452|emb|CBH10427.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 720
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 29/177 (16%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
++FL+H HSDH G++ W+ G ++ SR T + K G+ S + LD+ + S+
Sbjct: 73 LFFLSHFHSDHYSGITEKWSHGTIYASRATGNVLCWKL-GVRRSCVECLDLAVTYIFSLR 131
Query: 77 S----------PSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEA 125
+ GE F V I ANHCPG +VM LFR DFG +L+TGDFR+ +
Sbjct: 132 NGDLVGKEEGRAECGEGCF-SVELIPANHCPG----AVMFLFRSADFGTILHTGDFRFSS 186
Query: 126 SNERA----------EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
A ++ N ++K++ + VD+L+LDNTYC + FP R Q +
Sbjct: 187 PAVPALSIKHRCWEPDLRSNPVLKSMGN--VDVLFLDNTYCQPQFTFPDRAAIFQTV 241
>gi|72387748|ref|XP_844298.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359450|gb|AAX79887.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800831|gb|AAZ10739.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 720
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 29/177 (16%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
++FL+H HSDH G++ W+ G ++ SR T + K G+ S + LD+ + S+
Sbjct: 73 LFFLSHFHSDHYSGITEKWSHGTIYASRATGNVLCWKL-GVRRSCVECLDLAVTYIFSLR 131
Query: 77 S----------PSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEA 125
+ GE F V I ANHCPG +VM LFR DFG +L+TGDFR+ +
Sbjct: 132 NGDLVKKEEGRAECGEGCF-SVELIPANHCPG----AVMFLFRSADFGTILHTGDFRFSS 186
Query: 126 SNERA----------EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
A ++ N ++K++ + VD+L+LDNTYC + FP R Q +
Sbjct: 187 PAVPALSIKHRCWEPDLRSNPVLKSMGN--VDVLFLDNTYCQPQFTFPDRAAIFQTV 241
>gi|384500579|gb|EIE91070.1| hypothetical protein RO3G_15781 [Rhizopus delemar RA 99-880]
Length = 417
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 85/164 (51%), Gaps = 23/164 (14%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G YFL+H H+DH GL S W+ GP++CS++TA L + +D I L + + I
Sbjct: 107 GCDGYFLSHFHTDHYGGLRSNWSHGPIYCSQVTANLIKQEL-KVDPRFIHPLPMDELYPI 165
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF---RGDFGCL--LYTGDFRWEASNE 128
P S V+V IDANHCPG SV+ LF R D + L+TGDFR
Sbjct: 166 ----PQSN----VKVALIDANHCPG----SVLFLFVVERADKTVVRHLHTGDFR-----A 208
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+ + LV+ + + LYLD TY N YAFP++E Q +
Sbjct: 209 APRMCLHPLVRQPDNPSIQCLYLDTTYLNPQYAFPAQEECIQAV 252
>gi|327277472|ref|XP_003223488.1| PREDICTED: DNA cross-link repair 1A protein-like [Anolis
carolinensis]
Length = 967
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 146/319 (45%), Gaps = 53/319 (16%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFLTH HSDH GL+ + P++C+++T L K L+ I +L + +
Sbjct: 647 EGCKGYFLTHFHSDHYGGLTKKFTF-PIYCNKITGNLVKSKLRVLE-EYIHILPMNTECI 704
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
I + +V+ +DANHCPG + M+LF G +L+TGDFR S ER
Sbjct: 705 IDGI----------KVVLLDANHCPG----AAMILFAFPNGTAILHTGDFRAHPSMERYP 750
Query: 132 --IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL-- 179
IGR ++ LYLD TYC+ Y FPS++ A + + + P L
Sbjct: 751 FLIGRK----------INTLYLDTTYCSPEYTFPSQQEMIQFAANTAFEIVTLNPRTLVV 800
Query: 180 -------QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPW 232
+ L ++ +K S+++ + + SL T+ ++ LP
Sbjct: 801 CGTYSIGKEKVFLAIANVLGSKVSMSQEKYKTLQCLESTEINSLITLDWNNTLL-HLLPM 859
Query: 233 VVKPLKGGGSLPGSLFSSYQS--KWRATGGTQTEKLKEALGSVD---RFHKYIYSVPYSD 287
+ KG + + + ++ TG T +++ +L + R + IY +PYS+
Sbjct: 860 MQINFKGLQNHLSKFSAKFDQILAFKPTGWTYSDQCY-SLNDIQPQTRGNITIYGIPYSE 918
Query: 288 HSCFTEIEEFLNLVQPSNI 306
HS F E++ F+ ++P I
Sbjct: 919 HSSFVEMKRFVQWLKPQKI 937
>gi|226288344|gb|EEH43856.1| benzoate 4-monooxygenase [Paracoccidioides brasiliensis Pb18]
Length = 1402
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 24/166 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+S+W G ++CS++T L + L + + DI W
Sbjct: 445 EGCSAYFLSHFHSDHYMGLTSSWCHGRIYCSKITGNLVRQQ---LKVDPEWITDI-EWDE 500
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ + + G V+V + ANHCPG S + LF + G +L+ GDFR
Sbjct: 501 VFEIPETGG----VQVTMLPANHCPG----SSLFLFEKEVGKGPKPKIHRILHCGDFRAS 552
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSRE 166
++ R + R +V +L K +D+ YLD TY N YAFP++E
Sbjct: 553 PAHVRHPLLRPDVVDSLTGKTKQQTIDVCYLDTTYLNPKYAFPNQE 598
>gi|308809045|ref|XP_003081832.1| putative SNM1 (ISS) [Ostreococcus tauri]
gi|116060299|emb|CAL55635.1| putative SNM1 (ISS), partial [Ostreococcus tauri]
Length = 374
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 66/328 (20%)
Query: 16 QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKF--PGLDLSLIRVLDIGSWHSI 73
+ +FLTH H+DH +GL+ + +G ++ ++ T +L +K P L L R L+IG
Sbjct: 37 ETWFLTHFHADHHRGLTKTFDKGIIYGTKETLELVRMKIQVPALRL---RALEIG----- 88
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF----RGDFGCLLYTGDFRWEASNER 129
V + G V+V IDANHCPG +VM+LF R D +L+TGDFR+ A R
Sbjct: 89 -VPARVDG----VQVTFIDANHCPG----AVMILFEFPERPDASPVLHTGDFRFSARLAR 139
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSY-AFPSREV---AAQQIWVWPERL---QTM 182
E TLV+ IL LD TYC+ + AFP++E A ++ + L + +
Sbjct: 140 DE----TLVRIAASPKRPILILDTTYCSLEHDAFPTQEYVLNAVREALTHEDNLDGARKL 195
Query: 183 HLLGFHDIFTTKTSLTRVRAVPR--------------YSFSIDTLESL--NTMHPTIGIM 226
L G + + K R + R S + D E+L + + ++
Sbjct: 196 FLFGTYTVGKEKVFFEAARTLGRKVYVGAAKRSVLDALSLTRDEREALTRDDKRTNLHVV 255
Query: 227 PSGLPWVVKPLKGGGSLPGSLFSSYQSK------WRATGGTQTEKLKEALGSVDRFHKYI 280
P G K S+ Y+S+ +R TG T + K + S R +
Sbjct: 256 PMGSTSFSK--------MASILKYYKSRFDTVVAFRPTGWTFSANKKTSRASSRRQRGRL 307
Query: 281 --YSVPYSDHSCFTEIEEFLNLVQPSNI 306
Y +PYS+HS +E+ F+ + P +I
Sbjct: 308 VQYGLPYSEHSSLSELRAFIRFINPRSI 335
>gi|295672149|ref|XP_002796621.1| DNA cross-link repair protein pso2/snm1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283601|gb|EEH39167.1| DNA cross-link repair protein pso2/snm1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 932
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 24/166 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+S+W G ++CS++T L + L + + DI W
Sbjct: 445 EGCSAYFLSHFHSDHYMGLTSSWCHGQIYCSKITGNLVRHQ---LKVDPEWITDI-EWDE 500
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ + + G V+V + ANHCPG S + LF + G +L+ GDFR
Sbjct: 501 VFEIPETGG----VQVTMLPANHCPG----SSLFLFEKEVGKGPKRKIHRILHCGDFRAS 552
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSRE 166
++ R + R +V +L K +D+ YLD TY N YAFP++E
Sbjct: 553 PAHVRHPLLRPDVVDSLTGKTKQQTIDVCYLDTTYLNPKYAFPNQE 598
>gi|342180537|emb|CCC90013.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 718
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 93/186 (50%), Gaps = 29/186 (15%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV- 75
V+FL+H HSDH G++ W+ G + SR TA L K G+ + +R +D G + S+
Sbjct: 74 VFFLSHFHSDHYNGINPGWSHGIINASRATANLLRWKL-GVSSARVRCMDFGMTYIFSIQ 132
Query: 76 ----VSPSSGEKTFVE----VIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEAS 126
+S SG VE V I ANHCPG +VM LFR FG +L+TGDFR+
Sbjct: 133 SGMLLSVESGRAACVEDCFAVELIPANHCPG----AVMFLFRSAAFGTVLHTGDFRFSPP 188
Query: 127 NE----------RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWP 176
+ ++ + ++K L VD+L+ DNTYC + FP+R A W+
Sbjct: 189 SPLTTTVRLPSWEPDLREDPVLKTL--GTVDVLFFDNTYCFPQFKFPAR--AEVLKWINT 244
Query: 177 ERLQTM 182
E T
Sbjct: 245 EVFNTF 250
>gi|224126831|ref|XP_002319937.1| predicted protein [Populus trichocarpa]
gi|222858313|gb|EEE95860.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 61/81 (75%), Gaps = 5/81 (6%)
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPY 285
MPSGL WV+KP+KG G+L GSL S K + + +KL LG V+R+H+Y++S+PY
Sbjct: 1 MPSGLLWVLKPVKGDGNLFGSLLISRYKKRQPS-----DKLDGNLGYVERYHQYMFSIPY 55
Query: 286 SDHSCFTEIEEFLNLVQPSNI 306
SDHSCFTEI+EF+ LVQP+N+
Sbjct: 56 SDHSCFTEIQEFIELVQPTNM 76
>gi|410896302|ref|XP_003961638.1| PREDICTED: DNA cross-link repair 1A protein-like [Takifugu
rubripes]
Length = 894
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 151/325 (46%), Gaps = 49/325 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GL+ + + P++C+++T L K + I VL + + +
Sbjct: 574 EGITAYFLTHFHSDHYGGLTKS-STFPVYCNKITGNLVKSKLKVAE-PYIHVLPMNTQVT 631
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
+ V+ V+ ++ANHCP G +++L F D +L+TGDFR + S E
Sbjct: 632 VEGVT----------VVLLEANHCP---GAAMLLFFLPDGQIVLHTGDFRADPSME---- 674
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL----- 179
L L V LYLD TYC+ Y FP+++ A + + + P L
Sbjct: 675 ----LYPELLSCRVQTLYLDTTYCSPEYTFPTQQEVINFAASTAFELVALNPRTLVVCGS 730
Query: 180 ----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMH---PTIGIMPSGLPW 232
+ D+ +K SL+R + + ++ T + ++P +
Sbjct: 731 YSVGKEKVFFALADVLGSKVSLSRDKYNTMCCLESEQVKQCITTDWKAARVHVLPM-MQL 789
Query: 233 VVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVD---RFHKYIYSVPYSDHS 289
K L+ + S + + ++ TG T ++++ E++G ++ + IY +PYS+HS
Sbjct: 790 TFKKLEQHLARFSSQYDQLVA-FKPTGWTFSQQV-ESVGGIEPDVSGNISIYGIPYSEHS 847
Query: 290 CFTEIEEFLNLVQPSNIRGIVSSSS 314
F E++ F+ +QP I V++ S
Sbjct: 848 SFVEMKRFVQWLQPLKIIPTVNNGS 872
>gi|403167204|ref|XP_003327017.2| hypothetical protein PGTG_08794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166911|gb|EFP82598.2| hypothetical protein PGTG_08794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 797
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 87/180 (48%), Gaps = 33/180 (18%)
Query: 1 MEKGLISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M ISVD ++ G YFL+H HSDH LSS+W G ++CS+ TA L LK
Sbjct: 259 MPGTTISVDCFSHGPVPGVSAYFLSHAHSDHYTKLSSSWKHGKIYCSKTTANLVKLKL-R 317
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-- 114
+D I LD + +++ V V+ IDANHCPG S M LF G
Sbjct: 318 VDSHWIVPLDFNTPYTVD----------DVRVVLIDANHCPG----SAMFLFEGITKPDR 363
Query: 115 ----LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
L+ GDFR + R A+ + V+DI YLD TY + Y+FP+++ Q
Sbjct: 364 KPFRYLHCGDFRATPAQLRHP--------AIHEKVIDICYLDTTYLDPKYSFPAQDQVIQ 415
>gi|428176829|gb|EKX45712.1| hypothetical protein GUITHDRAFT_71213, partial [Guillardia theta
CCMP2712]
Length = 165
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 88/160 (55%), Gaps = 20/160 (12%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
E +++FLTH+H+DHTQGL S W G ++CS+++ L KF D+ +RV+ +
Sbjct: 23 EQVKLFFLTHMHADHTQGLHSEWDEGMIYCSQVSRSLLLDKF---DVDPVRVV------A 73
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
+ + P V+V IDANHCPG +VM F LL+TGDFR A I
Sbjct: 74 MEIGVPKLLRLDTVKVTCIDANHCPG----AVMFYFETQDIRLLHTGDFRLSP----AMI 125
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
++ + +D L +DNTYC+ + FPS++ A Q+I
Sbjct: 126 REDSPLAMARDCH---LVVDNTYCDPKHTFPSQQEAGQRI 162
>gi|449276210|gb|EMC84861.1| DNA cross-link repair 1A protein [Columba livia]
Length = 992
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 146/324 (45%), Gaps = 63/324 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GL+ +A P++C+++T L K + I VL + +
Sbjct: 672 EGCTAYFLTHFHSDHYCGLTKNFAF-PIYCNKITGNLVKAKL-RVKEEYIHVLPMDTECI 729
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
++ ++V+ +DANHCPG + M+LF G +L+TGDFR + S ER
Sbjct: 730 VN----------GIKVLLLDANHCPG----ATMILFCLPSGTVILHTGDFRADPSMER-- 773
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERLQTMH 183
AL V LYLD TYC+ Y FPS++ A + + + P +T+
Sbjct: 774 ------YPALVGQQVHTLYLDTTYCSPEYTFPSQQEVIQFAVNTAFETVTLNP---RTLV 824
Query: 184 LLGFHDIFTTKTSLTRVRAV-PRYSFSIDTLESLNTMHPTI----------GIMPSGLPW 232
+ G + I K L + + S S D ++L + G + LP
Sbjct: 825 VCGTYSIGKEKVFLAIAEVLGSKASMSRDKYKTLQCLESADVSSLISVDWGGTLLHVLPM 884
Query: 233 VVKPLKGGGSLPGSLFSSYQS-----KWRATGGTQTEKLKEALGSVD-----RFHKYIYS 282
+ K SL L+ ++ ++ TG T ++ L VD R IY
Sbjct: 885 MQINFK---SLQDHLYKFSENFDQVLAFKPTGWTYSDS---CLSLVDIKPQTRGRITIYG 938
Query: 283 VPYSDHSCFTEIEEFLNLVQPSNI 306
+PYS+HS + E++ F+ ++P I
Sbjct: 939 IPYSEHSSYLEMKRFVQWLKPQKI 962
>gi|405968531|gb|EKC33595.1| DNA cross-link repair 1A protein [Crassostrea gigas]
Length = 1051
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 146/317 (46%), Gaps = 51/317 (16%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G Y L+H H DH G++ ++++ P++CS++TA L K + S + L + +
Sbjct: 718 GCTGYILSHFHYDHYTGMTKSFSQ-PIYCSKITANLVISKI-KVKESFVHTLPLNKATVV 775
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERAEI 132
+ V E TF+E ANHCPG SV++LF+ D L+TGDFR + S E+
Sbjct: 776 NGV-----ELTFLE-----ANHCPG----SVLILFKLRDGRAFLHTGDFRADPSMEK--- 818
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR-EVAAQQIWVWPERLQ----TMHLLGF 187
AL + LYLD TYCN +YAFP + EV + + + LQ T+ + G
Sbjct: 819 -----YPALTGVRISQLYLDTTYCNPTYAFPPQSEVIDFTVNLVRQELQRNPRTLIVCGS 873
Query: 188 HDIFTTKTSLTRVRA------VPRYSFSI-DTLES--------LNTMHPTIGIMPSGLPW 232
+ I + + A V R +I D LE LN + ++P
Sbjct: 874 YTIGKERIFIAIADALGCKICVMRDKKNILDCLEDISLRERICLNFNDSCLHVLPMNKLN 933
Query: 233 VVKPLKGGGSLP---GSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHS 289
L+ G L G++ + + W ++ L+E +R IY +PYS+HS
Sbjct: 934 PKALLEHSGKLKPSYGNILAIEPTGWTF---SKVSSLQEIRPKYNRDGVKIYGIPYSEHS 990
Query: 290 CFTEIEEFLNLVQPSNI 306
+ E++ F+ V+P I
Sbjct: 991 SYLELQRFVQFVKPGKI 1007
>gi|254570835|ref|XP_002492527.1| Required for a post-incision step in the repair of DNA single and
double-strand breaks [Komagataella pastoris GS115]
gi|238032325|emb|CAY70348.1| Required for a post-incision step in the repair of DNA single and
double-strand breaks [Komagataella pastoris GS115]
gi|328353461|emb|CCA39859.1| DNA cross-link repair protein pso2/snm1 [Komagataella pastoris CBS
7435]
Length = 624
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 24/163 (14%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFL+H H+DH G++ W G ++CSR+TA+L LK+ + ++R+L I
Sbjct: 251 YFLSHFHADHYMGITKNWHNGIIYCSRITAELLVLKY-NVSEEILRILPFNETMEI---- 305
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERAEIGRNT 136
E T V+V +DANHCPG S + LFR C+L+ GDFR
Sbjct: 306 ----EDTQVKVTMMDANHCPG----SSIFLFRDSKEHCILHCGDFRINKE---------- 347
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
+++ L ++ +YLD TY + +Y FP +E + + E +
Sbjct: 348 MIQKLASYKINEIYLDTTYLDPTYNFPKQENVIDVVGTFCENI 390
>gi|388853130|emb|CCF53304.1| uncharacterized protein [Ustilago hordei]
Length = 878
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 84/175 (48%), Gaps = 43/175 (24%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFLTH HSDH G+++ W GP++CS TA L G+D +R L +
Sbjct: 277 EGCRGYFLTHFHSDHYGGMTANWNHGPIYCSVTTANLCRTHL-GVDPQWLRPLPM----E 331
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------------------ 114
++V P SG V V I+ANHCPG S + LF G C
Sbjct: 332 VAVPVPDSG---GVMVTCIEANHCPG----SCLFLFEGPQTCQLLSRNHATPYIGTGKIF 384
Query: 115 -LLYTGDFRWEA--SNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
L+ GDFR +N + +G+ +DI+YLD TYCN Y FP+++
Sbjct: 385 RYLHCGDFRASPVHTNHPSIVGKK----------LDIIYLDTTYCNPRYCFPAQD 429
>gi|303285386|ref|XP_003061983.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456394|gb|EEH53695.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 629
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 16 QVYFLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLS---LIRVLDIGSW 70
+ YFLTH HSDH GL+ W G ++CS +T L K P L+ ++ L +G
Sbjct: 57 RAYFLTHAHSDHLVGLNGEWESRGGAIYCSPVTRALLFRKHPALETRADVVVVALSLGRP 116
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFR---WEASN 127
H I++ GE + V +DA HCPG SV LF G G + +TGDFR W
Sbjct: 117 HVITL---QGGE--LLTVTPLDAGHCPG----SVGFLFEGACGRIYHTGDFRREDWCGRG 167
Query: 128 ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
A + + + L +D+L LDNTY N +Y FP+R AA+++
Sbjct: 168 GAAAAAASAIPECLTRAPLDLLLLDNTYANPTYDFPARSDAAEEV 212
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 17/145 (11%)
Query: 191 FTTK-TSLTRVRAVPRYSFSIDTLESL--NTMHPTIGIMPSGLPWVVKPLKGGGSLPGSL 247
T+K T+ RV AVP+ + L L ++ P +G++P+G W P
Sbjct: 307 LTSKCTASGRVFAVPKQQVTRAKLAHLQRHSASPIVGVLPTG--WAAAPWASA------- 357
Query: 248 FSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQP---- 303
GG G VD + SVPYS H+ F E+E F+ ++P
Sbjct: 358 -GGGGGGGGGGGGGGGGGGGGTGGDVDDDGPALRSVPYSLHAPFAELEAFVKALRPIAVV 416
Query: 304 SNIRGIVSSSSCYVDPLYYFGRLCR 328
N R + +D +F R CR
Sbjct: 417 GNTRPPRDPDAPCIDVGAHFARWCR 441
>gi|148669814|gb|EDL01761.1| DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae), isoform
CRA_a [Mus musculus]
Length = 557
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 83/160 (51%), Gaps = 28/160 (17%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + R P++CS +T L K + IR L + +
Sbjct: 314 EGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEITGNLLKKKL-RVQEQYIRQLPMDTECV 371
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
+ V+V+ +DANHCPG + M+LF+ G +L+TGDFR + S ER+
Sbjct: 372 VDS----------VKVVLLDANHCPG----ATMILFQLPNGAVILHTGDFRADPSMERSR 417
Query: 132 I-GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
+ GR V L+LD TYC+ Y FPS++ Q
Sbjct: 418 LAGRK----------VHTLFLDTTYCSPEYTFPSQQEVIQ 447
>gi|320168273|gb|EFW45172.1| SNM1 [Capsaspora owczarzaki ATCC 30864]
Length = 864
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 137/345 (39%), Gaps = 106/345 (30%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS--WH 71
G YFLTH HSDH GLS W GP++CS TA L + VL + H
Sbjct: 538 GCTGYFLTHFHSDHYGGLSKGWRHGPIYCSEATANL-----------AVHVLGVADDMLH 586
Query: 72 SISVVSPSSGEKTF--VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNER 129
+ P E T V V IDANHCPG C + + D L+TGDFR +
Sbjct: 587 RL----PMDREVTVDGVGVTLIDANHCPG--SCLIKFVL-PDGRVYLHTGDFRADP---- 635
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE----------------------- 166
A + L + +LYLD TYC+ Y FPS++
Sbjct: 636 AMLAHQALAQCR----FAMLYLDTTYCDPRYTFPSQQEVVSFCARISRAMVVRNSRLLVV 691
Query: 167 VAAQQI-----------------WVWPERLQTMHLLG---FHDIFTTKTSLTRVRAVPRY 206
V QI V P +L+ + L DI T + TR+ +P +
Sbjct: 692 VGTYQIGKEKVFQSIAKALGVKAAVDPHKLRILQCLNNKELSDILTLDKNSTRLHILPLF 751
Query: 207 SFSIDTLES-LNTMHP----TIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGT 261
S S +L++ L+ P + P+G W ++ SK +
Sbjct: 752 SLSAKSLQAYLSNFRPHYNAVLAFRPTG--W-----------------TFSSKLVSVADI 792
Query: 262 QTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
Q + G++ +Y VPYS+HS F+E+ EF+ ++ + +
Sbjct: 793 Q----PQITGNI-----CMYGVPYSEHSSFSELGEFVAALKATKV 828
>gi|350296124|gb|EGZ77101.1| hypothetical protein NEUTE2DRAFT_99556 [Neurospora tetrasperma FGSC
2509]
Length = 956
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 87/168 (51%), Gaps = 21/168 (12%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G + YFL+H HSDH GLS++W GP++CS++T L ++ L + V+++ +
Sbjct: 523 QGCKAYFLSHFHSDHYMGLSASWVHGPIYCSKVTGSLVKMQ---LRTAAKYVVELEFGET 579
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------LLYTGDFR-WEA 125
+ V P +G V V I+ANHCPG S + LF G +L+ GDFR A
Sbjct: 580 VPV--PETG--GAVMVTMIEANHCPG----SSLFLFEKKVGKEGRIQRILHCGDFRACPA 631
Query: 126 SNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
E + TL K K +D+ YLD TY N Y+FP +E Q
Sbjct: 632 HVEHPLLKPETLDKVTGKTKQQKIDVCYLDTTYLNPRYSFPPQEDVIQ 679
>gi|327286641|ref|XP_003228038.1| PREDICTED: protein artemis-like [Anolis carolinensis]
Length = 592
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 94/177 (53%), Gaps = 23/177 (12%)
Query: 9 DRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFP--------LKFPGLDL- 59
DR ++ YFL+H H DH +GL + + L CS LT +L+ L P +
Sbjct: 20 DRENLQARAYFLSHCHKDHMKGLRAPSMKRRLACS-LTVRLYCSPVTKELLLTNPRYNFW 78
Query: 60 -SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYT 118
+ I L+I + IS+V +SGEK + V + A HCPG SVM LF+G+ G +LYT
Sbjct: 79 ENYIVALEIETPTQISLVDEASGEKEDIVVTLLPAGHCPG----SVMFLFQGENGTVLYT 134
Query: 119 GDFRWEASNERAEIGRNTLVKALKDDVVDI--LYLDNTYCNSS-YAFPSREVAAQQI 172
GDFR + E+ R L+ + + V DI LYLD T+C+ Y PSRE Q I
Sbjct: 135 GDFRL----AKGEVARMELLHS-GNRVKDIQSLYLDTTFCDPRFYQIPSREECMQGI 186
>gi|164424300|ref|XP_958874.2| hypothetical protein NCU07381 [Neurospora crassa OR74A]
gi|157070457|gb|EAA29638.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 955
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 87/168 (51%), Gaps = 21/168 (12%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G + YFL+H HSDH GLS++W GP++CS++T L ++ L + V+++ +
Sbjct: 523 QGCKAYFLSHFHSDHYMGLSASWVHGPIYCSKVTGSLVKMQ---LRTAAKYVVELEFGET 579
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------LLYTGDFR-WEA 125
+ V P +G V V I+ANHCPG S + LF G +L+ GDFR A
Sbjct: 580 VPV--PETG--GAVMVTMIEANHCPG----SSLFLFEKKVGKEGRIQRILHCGDFRACPA 631
Query: 126 SNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
E + TL K K +D+ YLD TY N Y+FP +E Q
Sbjct: 632 HVEHPLLKPETLDKVTGKTKQQKIDVCYLDTTYLNPRYSFPPQEDVIQ 679
>gi|261865341|gb|ACY01922.1| hypothetical protein [Beta vulgaris]
Length = 551
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 159/364 (43%), Gaps = 49/364 (13%)
Query: 1 MEKGL-ISVDRWTEGSQV---YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M +GL SVD WT S+ +FLTH H DH ++S ++ P++ + LT L FP
Sbjct: 5 MPRGLPFSVDTWTPNSKFKRHHFLTHAHKDHCSNITSYFS-FPIYSTLLTKSLILCYFPQ 63
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
LD SL +++G SI V P V A DANHCPG +VM LF G+FG +L
Sbjct: 64 LDESLFVQIEVG--QSIIVDDPDGA----FTVTAFDANHCPG----AVMFLFEGEFGNIL 113
Query: 117 YTGDFRWEASNERAEIGRNTLVKALKD--DVVDILYLDNTYCNSSYAFPSREVAAQQI-- 172
+TGD R + + + + K+ +D ++LD T+ S PS++ A QQ+
Sbjct: 114 HTGDCRLTPECLQ-NLPEKYIARKGKEPSSQLDFVFLDCTFGKSLMDIPSKQSALQQVIN 172
Query: 173 WVW-----PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHP-TIGIM 226
+W P T ++LG ++ + + D +++ + P I
Sbjct: 173 CIWKHPDVPTVYLTCNMLGQEEVLVKVFQTFGSKIYVDKAKHPDFYQAMGFIAPQIISED 232
Query: 227 PS-------GLPWVVKPLKGGGS------LPGSLFSSYQSKWRATGGTQTEKL------K 267
PS G P + + K S P L ++W A T+ + +
Sbjct: 233 PSSRFHLFEGFPKLYEKAKKKISEARENMQPEPLIIRPSAQWYAREETELTVMERKILER 292
Query: 268 EALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
+ D+F ++ V YS HS E+E + L+ P + + ++ C L Y + C
Sbjct: 293 SNIPVKDQFG--VWHVCYSMHSSRQELEWAMELLSPKWV--VSTTPECRAMELEYVKKHC 348
Query: 328 RANQ 331
N+
Sbjct: 349 FNNR 352
>gi|320039680|gb|EFW21614.1| DNA cross-link repair protein pso2/snm1 [Coccidioides posadasii
str. Silveira]
Length = 840
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 24/166 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+S W+ GP++CS++T L + L ++ ++D+
Sbjct: 429 EGCNAYFLSHFHSDHYIGLNSNWSHGPIYCSKVTGNLVRQQ---LKVNPKFIVDLEFEKP 485
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
V P +G V V I ANHCPG S + LF FG +L+ GDFR
Sbjct: 486 FEV--PETGG---VRVTMIPANHCPG----SSLFLFEKVFGQGKARRYQRVLHCGDFRAS 536
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSRE 166
++ + + R V + K +D+ YLD TY N YAFPS+E
Sbjct: 537 PAHIQHPLIRPDAVDPVTGQPKQQRIDVCYLDTTYLNPKYAFPSQE 582
>gi|302822859|ref|XP_002993085.1| hypothetical protein SELMODRAFT_449005 [Selaginella moellendorffii]
gi|300139085|gb|EFJ05833.1| hypothetical protein SELMODRAFT_449005 [Selaginella moellendorffii]
Length = 795
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 154/332 (46%), Gaps = 60/332 (18%)
Query: 12 TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
TE S +FLTH HSDH QGL+ ++ G ++CS +TA+L L+ G+ + L++
Sbjct: 372 TECSH-WFLTHFHSDHYQGLTKSFRFGKIYCSMITARLVNLRI-GITWDRLHPLNL---- 425
Query: 72 SISVVSPSSGEKTFVE---VIAIDANHCPGILGCSVMLLFRG-DFGCLLYTGDFRWEASN 127
E+T ++ V +DANHCPG + M+LF D +L+TGDFR+ +
Sbjct: 426 ---------NERTKIDGVWVTLLDANHCPG----AAMILFETHDGKFVLHTGDFRF--CD 470
Query: 128 ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIW--VWPERLQ--TMH 183
+ A I + + L LD TYC+ Y FP +E Q + + E T+
Sbjct: 471 DMARIMDILPCR------LSALVLDTTYCDPQYDFPKQETVIQFVIDAIQAESFNPSTLF 524
Query: 184 LLGFHDIFTTKTSLTRVR---------AVPR-----YSFSIDTLESLNT--MHPTIGIMP 227
L+G + + + L R AV R S + ++ + T +I ++P
Sbjct: 525 LIGTYSLGKERLFLEVARVLRKKIYVGAVKRRMLGCLDLSDEDMDWITTSECESSIHVVP 584
Query: 228 SGLPWVVKPLKGGGSLPGSLFSSYQS--KWRATGGTQTEKLKEALGSVDRFHKYI---YS 282
W + K S+ Y + + TG + + K K G+ R+ + Y
Sbjct: 585 L---WSIASFKRMASISRHYHGKYTTIVSFSPTGWSFS-KGKRGTGNGKRWQQGTIIRYE 640
Query: 283 VPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
VPYS+HS FTE++ F+ L+ P I V++SS
Sbjct: 641 VPYSEHSSFTELKTFVKLLSPVEIIPSVNNSS 672
>gi|303311571|ref|XP_003065797.1| DNA repair metallo-beta-lactamase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240105459|gb|EER23652.1| DNA repair metallo-beta-lactamase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 840
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 24/166 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+S W+ GP++CS++T L + L ++ ++D+
Sbjct: 429 EGCNAYFLSHFHSDHYIGLNSNWSHGPIYCSKVTGNLVRQQ---LKVNPKFIVDLEFEKP 485
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
V P +G V V I ANHCPG S + LF FG +L+ GDFR
Sbjct: 486 FEV--PETGG---VRVTMIPANHCPG----SSLFLFEKVFGQGKARRYQRVLHCGDFRAS 536
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSRE 166
++ + + R V + K +D+ YLD TY N YAFPS+E
Sbjct: 537 PAHIQHPLIRPDAVDPVTGQPKQQRIDVCYLDTTYLNPKYAFPSQE 582
>gi|405958776|gb|EKC24868.1| Protein artemis [Crassostrea gigas]
Length = 814
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 92/174 (52%), Gaps = 24/174 (13%)
Query: 6 ISVDRW---TEGSQVYFLTHLHSDHTQGLSSAW------ARGPLF--CSRLTAKLFPLKF 54
IS+DR+ S VYFL+H H DH +GL+SA +R +F CS +T L K
Sbjct: 14 ISLDRFDGLNLKSTVYFLSHCHCDHMEGLASAEFLDRLSSRNDIFLYCSEVTKILLMEKL 73
Query: 55 PGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC 114
L+ ++VL +G I + + +S + V V I A+HCPG SVM LF G G
Sbjct: 74 AKLE-KFVKVLKVGEPSCIPIPAQNSAKTEKVTVTLIHASHCPG----SVMFLFEGYDGT 128
Query: 115 LLYTGDFRWEASNER--AEIGRNTLVKALKDDVVDILYLDNTYCN-SSYAFPSR 165
LYTGDFRWE+ + + + VK L LY+D T+C+ +S+ PSR
Sbjct: 129 ALYTGDFRWESDQIQNVPALHVDQRVKPLAS-----LYVDTTFCHPNSFLIPSR 177
>gi|224093392|ref|XP_002309909.1| predicted protein [Populus trichocarpa]
gi|222852812|gb|EEE90359.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 160/361 (44%), Gaps = 44/361 (12%)
Query: 1 MEKGL-ISVDRWTEGSQV---YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
+ +GL SVD W+ S+ +FLTH H DHT G+ + P++ + LT L +P
Sbjct: 5 LPRGLPFSVDTWSPNSKRKRHHFLTHAHKDHTSGILTHSCY-PIYATHLTKLLVLQNYPQ 63
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
L+ SL +++G S+ P GE +V A DANHCPG +VM LF G+FG +L
Sbjct: 64 LEGSLFVGIEVG--ESVVFNDPD-GE---FKVTAFDANHCPG----AVMFLFEGNFGNIL 113
Query: 117 YTGDFRWEASNERAEIGRNTLVKALKDD--VVDILYLDNTYCNSSYAFPSREVAAQQ--- 171
+TGD R R + + K K+ +D ++LD T+ + PS+ A QQ
Sbjct: 114 HTGDCRLTPEGVRC-LPEKYISKKGKEPRCQLDYVFLDCTFGKFTQKLPSKHSAIQQVLN 172
Query: 172 -IWVWPER---LQTMHLLGFHDI-------FTTKTSLTRVRAVPRYSFSIDTLESLNTMH 220
IW P T LLG D+ F +K + V + T+ + T
Sbjct: 173 CIWKHPAATVVYLTCDLLGQEDVLAAVSETFGSKIFVDEVANTESFRALTLTVPEILTQD 232
Query: 221 PTIGI-MPSGLPWVV-----KPLKGGGSL-PGSLFSSYQSKWRAT--GGTQTE-KLKEAL 270
P+ M G P + K + +L P L ++W A G ++TE + K
Sbjct: 233 PSSRFHMFDGFPKLYERAAKKIAEAQANLQPEPLIIRPSAQWYACEEGYSETESQRKLRF 292
Query: 271 GSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLCRAN 330
R ++ V YS HS E+E L L+ P + + ++ SC L Y + C
Sbjct: 293 NEAVRDPNSVWHVCYSMHSSRGELEWALQLLVPKWV--VSTTPSCLAMELDYVKKHCSGT 350
Query: 331 Q 331
+
Sbjct: 351 K 351
>gi|281211444|gb|EFA85608.1| DNA repair metallo-beta-lactamase domain-containing protein
[Polysphondylium pallidum PN500]
Length = 423
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 23/161 (14%)
Query: 12 TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+E + YFL+H HSDH G++ W GP++CS T KL K G+D I+ + ++
Sbjct: 237 SEDYKHYFLSHFHSDHYTGITKTWKFGPIYCSFETGKLVYTKL-GVDSEYIKAMPWNTFM 295
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAE 131
I V+ V +DANHCPG + M LF D L+TGDFR+ ++
Sbjct: 296 KIENVN----------VAILDANHCPG----AAMFLFCVDGEYTLHTGDFRY-----NSK 336
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+ L++ +K + LYLDNT+C+ Y FP ++ +++
Sbjct: 337 MADYPLLRDIK---LTRLYLDNTFCDPQYVFPPQQQIVREV 374
>gi|258575265|ref|XP_002541814.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902080|gb|EEP76481.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 828
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 24/166 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+S W+ GP++CS++T L + L+++ V+D+ +
Sbjct: 420 EGCSAYFLSHFHSDHYVGLNSNWSHGPIYCSKVTGNLVRQQ---LNVNPKFVVDL-DFEK 475
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ V + G V+V I ANHCPG S + LF FG +L+ GDFR
Sbjct: 476 PTDVPDTDG----VKVTMIHANHCPG----SALFLFEKKFGQGKGQRVQRILHCGDFRAS 527
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSRE 166
++ + + R + K +D+ YLD TY N YAFPS++
Sbjct: 528 PAHIQHPLLRPDPIDQATGQPKQQRIDVCYLDTTYLNPKYAFPSQQ 573
>gi|119194063|ref|XP_001247635.1| hypothetical protein CIMG_01406 [Coccidioides immitis RS]
gi|392863120|gb|EAS36170.2| DNA repair protein Pso2/Snm1 [Coccidioides immitis RS]
Length = 840
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 24/166 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+S W+ GP++CS++T L + L ++ ++D+
Sbjct: 429 EGCNAYFLSHFHSDHYIGLNSNWSHGPIYCSKVTGNLVRQQ---LKVNPKFIVDLEFEKP 485
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
V P +G V V I ANHCPG S + LF FG +L+ GDFR
Sbjct: 486 FEV--PETGG---VRVTMIPANHCPG----SSLFLFERVFGQGKARRFQRVLHCGDFRAS 536
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSRE 166
++ + + R V + K +D+ YLD TY N YAFPS+E
Sbjct: 537 PAHIQHPLIRPDAVDPVTGQPKQQRIDVCYLDTTYLNPKYAFPSQE 582
>gi|336464041|gb|EGO52281.1| hypothetical protein NEUTE1DRAFT_125795 [Neurospora tetrasperma
FGSC 2508]
Length = 954
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 87/168 (51%), Gaps = 21/168 (12%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G + YFL+H HSDH GLS++W GP++CS++T L + L + V+++ +
Sbjct: 522 QGCKAYFLSHFHSDHYMGLSASWVHGPIYCSKVTGSLVKTQ---LRTAAKYVVELEFGET 578
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------LLYTGDFR-WEA 125
+ V P +G V V I+ANHCPG S + LF G +L+ GDFR A
Sbjct: 579 VPV--PETG--GAVMVTMIEANHCPG----SSLFLFEKKVGKEGRTQRILHCGDFRACPA 630
Query: 126 SNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
E + TL K +K +D+ YLD TY N Y+FP +E Q
Sbjct: 631 HVEHPLLKPETLDKVTGKIKQQKIDVCYLDTTYLNPRYSFPPQEDVIQ 678
>gi|255577704|ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
gi|223530792|gb|EEF32657.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
Length = 543
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 156/363 (42%), Gaps = 48/363 (13%)
Query: 1 MEKGL-ISVDRWTEGSQV---YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M +GL SVD W+ S+ +FLTH H DH G+ A + P++ + LT L L FP
Sbjct: 5 MPRGLPFSVDTWSPTSKRKRHHFLTHAHKDHCSGIL-AHSSYPIYATHLTKSLLLLYFPQ 63
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
L+ SL +++G S+ + P V A DANHCPG +VM LF G FG +L
Sbjct: 64 LEDSLFVGIEVG--QSLVIDDPYGN----FSVTAFDANHCPG----AVMFLFEGSFGNIL 113
Query: 117 YTGDFRWEASNERAEIGRNTLVKALKDD--VVDILYLDNTYCNSSYAFPSREVAAQQ--- 171
+TGD R + + + + K K+ +D ++LD T+ PS+ A+QQ
Sbjct: 114 HTGDCRLSPECIQC-LPKKYISKNGKEPRCQLDYVFLDCTFGRFHQKLPSKHSASQQVIN 172
Query: 172 -IWVWPER---LQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIM- 226
IW P T LLG ++ + + + + + +L P I
Sbjct: 173 CIWKHPAAAIVYLTCDLLGQEELLANVSRTFGSKIYVEKAANPECFHALTLTVPQILTQD 232
Query: 227 PS-------GLPWVVKPLKGGGSL------PGSLFSSYQSKWRA-----TGGTQTEKLKE 268
PS G P + + + P L ++W A +G KL+
Sbjct: 233 PSSRFHVFNGFPMLYERAAAKVAEAQASFQPEPLIIRPSAQWYACEEEESGTESRRKLRL 292
Query: 269 ALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLCR 328
+ D+F I+ V YS HS E+E FL L+ P + + ++ C L Y +
Sbjct: 293 SEAVRDQFG--IWHVCYSMHSSREELEWFLQLLAPKWV--VSTTPPCRATELEYIRKHSF 348
Query: 329 ANQ 331
NQ
Sbjct: 349 GNQ 351
>gi|302787062|ref|XP_002975301.1| hypothetical protein SELMODRAFT_415475 [Selaginella moellendorffii]
gi|300156875|gb|EFJ23502.1| hypothetical protein SELMODRAFT_415475 [Selaginella moellendorffii]
Length = 769
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 153/332 (46%), Gaps = 60/332 (18%)
Query: 12 TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
TE S +FLTH HSDH QGL+ ++ G ++CS +TA+L L+ G+ + L+
Sbjct: 346 TECSH-WFLTHFHSDHYQGLTKSFRFGKIYCSMITARLVNLRI-GITWDRLHPLNF---- 399
Query: 72 SISVVSPSSGEKTFVE---VIAIDANHCPGILGCSVMLLFRG-DFGCLLYTGDFRWEASN 127
E+T ++ V +DANHCPG + M+LF D +L+TGDFR+ +
Sbjct: 400 ---------NERTKIDGVWVTLLDANHCPG----AAMILFETHDGKFVLHTGDFRF--CD 444
Query: 128 ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIW--VWPERLQ--TMH 183
+ A I + + L LD TYC+ Y FP +E Q + + E T+
Sbjct: 445 DMARIMDILPCR------LSTLVLDTTYCDPQYDFPKQETVIQFVIDAIQAESFNPSTLF 498
Query: 184 LLGFHDIFTTKTSLTRVR---------AVPR-----YSFSIDTLESLNT--MHPTIGIMP 227
L+G + + + L R AV R S + ++ + T +I ++P
Sbjct: 499 LIGTYSLGKERLFLEVARVLRKKIYVGAVKRRMLGCLDLSDEDMDWITTSECESSIHVVP 558
Query: 228 SGLPWVVKPLKGGGSLPGSLFSSYQS--KWRATGGTQTEKLKEALGSVDRFHKYI---YS 282
W + K S+ Y + + TG + + K K G+ R+ + Y
Sbjct: 559 L---WSIASFKRMASISRHYHGKYTTIVSFSPTGWSFS-KGKRGTGNGKRWQQGTIIRYE 614
Query: 283 VPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
VPYS+HS FTE++ F+ L+ P I V++SS
Sbjct: 615 VPYSEHSSFTELKTFVKLLSPVEIIPSVNNSS 646
>gi|443683308|gb|ELT87607.1| hypothetical protein CAPTEDRAFT_226585 [Capitella teleta]
Length = 657
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 142/332 (42%), Gaps = 64/332 (19%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G + YFL+H H DH GL+ + + ++C ++T L K G+ +R L++ + + I
Sbjct: 323 GCRAYFLSHFHYDHYGGLTKKFQQQ-IYCCKVTGNLVERKL-GVASKRVRKLEMNTLYVI 380
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEI 132
VEV +DANHCPG SV+ LFR + G +L+TGDFR E
Sbjct: 381 E----------GVEVTLLDANHCPG----SVLFLFRLENGRSILHTGDFRANVDMES--- 423
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE---------------------VAAQQ 171
AL+ + LYLD TYC+ +YAFP + +
Sbjct: 424 -----YPALQGVKISQLYLDTTYCDPNYAFPPQRDVIDFAVKLAEDFHRHQPNGLIVVGS 478
Query: 172 IWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPT--IGIMPSG 229
+ ER+ L + + K +TR + + ++ + T P+ + ++P
Sbjct: 479 YTIGKERI----FLAIAEALSCKICITRDKQIVMECLDDPCVQRMLTREPSAVVHVLPMN 534
Query: 230 -------LPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYS 282
L ++ K S+ + + GG + K + G++ IY
Sbjct: 535 HLRYDTLLEYLNKLKPRFDSVLALQPTGWSHSSGGGGGLDAIRPKRSQGNI-----TIYG 589
Query: 283 VPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
VPYS+HS F E++ F+ ++P I V++ S
Sbjct: 590 VPYSEHSSFLEMKRFVQFIRPEKIIPTVNNGS 621
>gi|384246117|gb|EIE19608.1| DRMBL-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 319
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 54/324 (16%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
Y+L+H HSDHT GL+++++ G ++CS +TA L +K ++ S I+ L + +I ++
Sbjct: 21 YWLSHYHSDHTTGLTTSFSSGTIYCSAVTANLL-VKDMHINPSCIQPLPL----NIPLLV 75
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFR------GDFG--CLLYTGDFRWEASNER 129
+ V IDANHCPG +V+ LF+ +F +L+TGD RW
Sbjct: 76 DG------INVTLIDANHCPG----AVLFLFKTPPPPGSEFSEQVILHTGDMRWH----- 120
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVA-AQQIWVWPE----RLQTMHL 184
+GR+ ALK+ +D+L+LD TY + + FP +E A A + V + R T+ +
Sbjct: 121 PRMGRH---PALKNQRIDMLFLDTTYASPKHVFPCQEDAIADIVRVMKQEAKARPGTLFI 177
Query: 185 LGFHDIFTTKTSLTRVRAVP-RYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGG-- 241
+G + I + L +A+ + + D L L + G+ + + + +
Sbjct: 178 MGSYRIGKERAYLGAAKALGWKVHVNADKLRVLRLL----GLPENDMALLTRDAAAARIH 233
Query: 242 -SLPGSLFSSYQSKWRATGGTQTEKL----------KEALGSVDRFHKYIYSVPYSDHSC 290
S G L + R G T + K L IY VPYS+HS
Sbjct: 234 VSFMGKLLTPDALTDRIRAGPWTHVVAFRPTGWSFQKSGLSCRREGDVAIYGVPYSEHSS 293
Query: 291 FTEIEEFLNLVQPSNIRGIVSSSS 314
F E+ + + ++P I V++S+
Sbjct: 294 FAELRDCVKTLRPRRIVPTVNAST 317
>gi|119481915|ref|XP_001260986.1| DNA repair protein Pso2/Snm1, putative [Neosartorya fischeri NRRL
181]
gi|119409140|gb|EAW19089.1| DNA repair protein Pso2/Snm1, putative [Neosartorya fischeri NRRL
181]
Length = 848
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 82/167 (49%), Gaps = 26/167 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+S+W GP++CSR TA L + L + V+D+
Sbjct: 431 EGCNAYFLSHYHSDHYMGLTSSWRHGPIYCSRATANLVRQQ---LKVDSKWVVDLPFEKK 487
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
V E V V I+ANHCPG S + LF G +L+ GDFR
Sbjct: 488 TEVP-----ETNGVHVTMIEANHCPG----SAIFLFEKQMGSGPSARVQRILHCGDFRAS 538
Query: 125 ASNE-----RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
++ R EI T + + +D+ YLD TY + YAFPS+E
Sbjct: 539 PTHVQHALLRPEIDDPTTGQ-RRQQKIDVCYLDTTYLSPKYAFPSQE 584
>gi|66817282|ref|XP_642494.1| DNA repair metallo-beta-lactamase domain-containing protein
[Dictyostelium discoideum AX4]
gi|74861596|sp|Q86KS1.1|DCR1_DICDI RecName: Full=DNA cross-link repair 1 protein
gi|60470572|gb|EAL68551.1| DNA repair metallo-beta-lactamase domain-containing protein
[Dictyostelium discoideum AX4]
Length = 920
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 139/319 (43%), Gaps = 44/319 (13%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFLTH HSDH G++ W+ G ++C+ T KL K G+D R + W+ + +
Sbjct: 286 YFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKL-GVDQ---RYIVKCEWNKLIEIQ 341
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG------CLLYTGDFRWEASNERAE 131
V+V +D+NHCPG ++ R G +L+TGDFR+ S
Sbjct: 342 G-------VKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYP 394
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL---QTMHLLGFH 188
+ LK + LYLDNTYC+ Y FP + +Q+ + +T+ L G +
Sbjct: 395 L--------LKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTY 446
Query: 189 DIFTTKTSLTRVRAVPR-YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKG-GGSLPG- 245
I + L + + S + L + + I ++ P + S+
Sbjct: 447 VIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCLDINKFTTNELITPFRAVTMSMLSY 506
Query: 246 ----SLFSSYQSKW------RATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIE 295
SL S +K+ R TG TQ K+++ ++R YSV YS+HS F E+
Sbjct: 507 HNMLSLLDSSNNKYKRVIGFRPTGWTQA---KKSITYLNRGPTTFYSVAYSEHSSFNELR 563
Query: 296 EFLNLVQPSNIRGIVSSSS 314
+ ++ +P+ I V S
Sbjct: 564 DCIDHFRPTQIIPTVDCDS 582
>gi|307105557|gb|EFN53806.1| hypothetical protein CHLNCDRAFT_136511 [Chlorella variabilis]
Length = 1506
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 146/344 (42%), Gaps = 77/344 (22%)
Query: 16 QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIG-SW-HSI 73
+ YFLTH HSDH GL W+RG ++CS +TA+L + +L +G W H +
Sbjct: 36 KAYFLTHAHSDHYNGLRDDWSRGVIYCSHVTARL-----------IAHMLGVGRRWLHPL 84
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERAEI 132
+ SP+ + VEV + ANHCPG +V LFR D ++TGD R+ + +
Sbjct: 85 PLDSPTMIQG--VEVTLVSANHCPG----AVQFLFRLPDGRRFIHTGDMRFSPA-----L 133
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL---------QTMH 183
N ++ + D L+LD TYCN Y FP +E + + + +RL Q
Sbjct: 134 LANPHLQQFRRVGCDALFLDTTYCNPRYCFPPQEESIEYVASTIQRLLQEDAEQQQQESQ 193
Query: 184 LLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGI---MPSGLPWVVKPLKGG 240
G + R+ + Y + + L +H G+ + V++ L
Sbjct: 194 GEGREPGARQRRPFRRLYLISTYGIGKERI--LTAVHDRCGVRLHVADRKHAVMQQLDLP 251
Query: 241 GSLPGSLFSSYQS-------KWRATGGT---------QTEKLKEALGSVD---------- 274
G P LF++ + +W G T E L++ LG+ +
Sbjct: 252 GYDPSQLFTTDRGSTPVHVVQWGFLGETWPYFRPNFVSQEALRQELGAEEVVGFVPTGWL 311
Query: 275 ---RFHKY---------IYSVPYSDHSCFTEIEEFLNLVQPSNI 306
R + ++ VPYS+H+ F E+ E++ ++P +
Sbjct: 312 YEMRKETFAVKRKGACSVHLVPYSEHNSFDELREYVRFLRPLQV 355
>gi|115401818|ref|XP_001216497.1| hypothetical protein ATEG_07876 [Aspergillus terreus NIH2624]
gi|114190438|gb|EAU32138.1| hypothetical protein ATEG_07876 [Aspergillus terreus NIH2624]
Length = 957
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G YFL+H HSDH GL+S+W GP++CSR TA L + +D + +G
Sbjct: 550 DGCSAYFLSHFHSDHYVGLTSSWKHGPIYCSRATANLVRQQL-KVDARWL----VGLEFE 604
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ P +G V+V IDANHCPG S + LF G +L+ GDFR
Sbjct: 605 RTTEVPGTGG---VQVTLIDANHCPG----SALFLFEKPTGPNPGSRLQRVLHCGDFRAS 657
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
++ + + R +V + + +D+ YLD TY N Y FPS++ Q
Sbjct: 658 PTHIQHHLLRPEIVDSTTGQKRPQRIDVCYLDTTYLNPKYGFPSQDAVIQ 707
>gi|195062921|ref|XP_001996278.1| GH22402 [Drosophila grimshawi]
gi|193899773|gb|EDV98639.1| GH22402 [Drosophila grimshawi]
Length = 623
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 136/319 (42%), Gaps = 60/319 (18%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFL+H H+DH GL+ +A PL+ S +TA+L KF +D + +D+ SVV
Sbjct: 270 YFLSHYHADHYVGLTRKFAH-PLYMSPITARLVE-KFIPIDSQFVHEIDVDK----SVVV 323
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
+EV AIDANHCPG ++MLLF+ G C+L+TGDFR E I N
Sbjct: 324 KD------IEVTAIDANHCPG----AIMLLFKFSTGKCILHTGDFRASFEMESLPIFWN- 372
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAF----PSREVAAQQIWVWPER---LQTMHLLGFHD 189
+ +D+LYLD TY +Y F S A + + E+ + +H+ G +
Sbjct: 373 ------EPNIDLLYLDTTYLAKNYDFCHQSDSIYSACSLVQKFHEKNASKRILHVCGSYL 426
Query: 190 IFTTKTSLT-------RVRAVPRYSFSIDTL-----------ESLNTMHPTIGIMPSGLP 231
I K L RV P +ID L + + IG+ P
Sbjct: 427 IGKEKVWLALAEEFGLRVWTEPHRRKAIDCLNWPELQLVLSDDPFDANLHVIGMGKISYP 486
Query: 232 WVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCF 291
+ + K S L S W K +G V YS+HS +
Sbjct: 487 QLDQYFKQFESQFDMLLGIRPSGWEKNSKPSYGKRISVIG-----------VEYSEHSSY 535
Query: 292 TEIEEFLNLVQPSNIRGIV 310
E+E F+ ++P+N+ V
Sbjct: 536 KELERFVRFLKPTNVISTV 554
>gi|145351984|ref|XP_001420339.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580573|gb|ABO98632.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 368
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 149/348 (42%), Gaps = 76/348 (21%)
Query: 16 QVYFLTHLHSDHTQGLSSAWAR----GPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+ Y LTH H+DH GLS ++ + ++CS +TA+L ++F G+ + ++G
Sbjct: 32 RCYVLTHFHADHYCGLSGSFGKDGDEAKIYCSEITARLV-VEFLGVKRERVVGCELGRGT 90
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG--CLLYTGDFRWEASNER 129
++ + VE +DANHCPG + ++ FR LL+TGDFR A+ R
Sbjct: 91 TLRGAGTRGDD---VEATFVDANHCPG----ACLVFFRNKITGETLLHTGDFR-AAARVR 142
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPS--------REVAAQQIWVWPERLQT 181
+ L+ +D VD + LD TYC + FP R++A ++ P +T
Sbjct: 143 NDGTLRELLTTCRDGSVDEVMLDTTYCEKKWTFPDQDVVLNKMRQIARDELAREP---RT 199
Query: 182 MHLLGFHDIFTTKT-------SLTRVRAVPRYSFSI----------------DTLESLNT 218
+ L G + I + + +R R S+ D E+
Sbjct: 200 LFLCGSYSIGKERAIQAVCQGAQSRASVTARRKKSLELSGWWRDDAFVCEDDDAEEAARC 259
Query: 219 MHPTIGIMPSGLPWVVKPLKGGGSLPGSL---FSSYQSKWRA------TGGTQTEKLKEA 269
G+ G GS ++ + +WRA TG + T+K+ E
Sbjct: 260 QVRVCGL-------------GKGSNHRAMMEIMAKEAPRWRAAVAFSPTGWSYTKKMDED 306
Query: 270 LGSVDRF-----HKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSS 312
+V+ + Y++PYS+HS +TE+ EF+ ++P I V++
Sbjct: 307 GFNVNPWIENEGRTRTYAIPYSEHSSYTELREFIKFLKPKKITPTVNA 354
>gi|324021704|ref|NP_001018385.3| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Danio
rerio]
Length = 926
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 144/320 (45%), Gaps = 56/320 (17%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GL A P++C+++T+ L K +D I VL + +
Sbjct: 592 EGVTAYFLTHFHSDHYGGLKKDSAV-PIYCNKVTSNLVKSKL-KVDEQYIHVLPMNTECI 649
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF-RGDFGCLLYTGDFRWEASNERAE 131
+ V+V +DANHCPG +VMLLF D +L+TGDFR + S ER
Sbjct: 650 VQ----------GVKVTLLDANHCPG----AVMLLFVLPDGQTVLHTGDFRADPSMER-- 693
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L+ + LYLD TYC+ Y FP+++ A +++ + P L
Sbjct: 694 ------YPELQGLRIQTLYLDTTYCSPEYTFPTQQEVVTFAVNTAFERVTLNPRTLVVCG 747
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSG----L 230
+ L ++ ++K L++ +Y+ ++ LES + S L
Sbjct: 748 TYSVGKEKVFLAVSEVLSSKVCLSK----DKYN-TMCCLESEDIGQRITTNWQSAQVHVL 802
Query: 231 PWVVKPLKGGGSLPGSLFSSYQS--KWRATGGT--QTEKLKEALGSVDRFHKYIYSVPYS 286
P + K + Y ++ TG T QT + + L + + IY +PYS
Sbjct: 803 PMMQINFKNLQTHLKKFSKKYDQLVAFKPTGWTFNQTVGVDDILPQT-QGNISIYGIPYS 861
Query: 287 DHSCFTEIEEFLNLVQPSNI 306
+HS F E++ F+ ++P I
Sbjct: 862 EHSSFLELKRFVQWLRPKKI 881
>gi|71002352|ref|XP_755857.1| DNA repair protein Pso2/Snm1 [Aspergillus fumigatus Af293]
gi|66853495|gb|EAL93819.1| DNA repair protein Pso2/Snm1, putative [Aspergillus fumigatus
Af293]
gi|159129914|gb|EDP55028.1| DNA repair protein Pso2/Snm1, putative [Aspergillus fumigatus
A1163]
Length = 850
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 26/167 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+S+W GP++CSR TA L + L + V+D+ +
Sbjct: 433 EGCNAYFLSHYHSDHYMGLTSSWRHGPIYCSRATANLVRQQ---LKVDPKWVVDL-PFEK 488
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ V ++G V V I+ANHCPG S + LF G +L+ GDFR
Sbjct: 489 KTEVPGTNG----VHVTMIEANHCPG----SAIFLFEKQMGSGPSARVQRILHCGDFRAS 540
Query: 125 ASNE-----RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
++ R E+ T + + +D+ YLD TY + YAFPS+E
Sbjct: 541 PTHVQHVLLRPEVDDPTTGQ-RRQQKIDVCYLDTTYLSPKYAFPSQE 586
>gi|398410702|ref|XP_003856699.1| hypothetical protein MYCGRDRAFT_54222, partial [Zymoseptoria
tritici IPO323]
gi|339476584|gb|EGP91675.1| hypothetical protein MYCGRDRAFT_54222 [Zymoseptoria tritici IPO323]
Length = 618
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 81/171 (47%), Gaps = 30/171 (17%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G Q YFL+H HSDH GL+S W GP++CS++TA L + +D + LD W
Sbjct: 197 KGCQAYFLSHFHSDHYIGLTSTWTHGPIYCSKVTANLVKQQL-RVDPKYVIALD---WEK 252
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG----------CLLYTGDFR 122
+ + G V V I ANHCPG S + LF G +L+ GDFR
Sbjct: 253 PWEIPGTKG----VTVTMISANHCPG----SSLYLFEKTIGRKTNGEPRQQRILHCGDFR 304
Query: 123 WEASNERAEIG------RNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
A E R+ + K+ +D+ YLD TY N YAFP +E
Sbjct: 305 --ACRMHVEHPLLMPDIRDKVTGKTKEQKIDVCYLDTTYLNPKYAFPEQEA 353
>gi|452847871|gb|EME49803.1| hypothetical protein DOTSEDRAFT_40954 [Dothistroma septosporum
NZE10]
Length = 849
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 83/171 (48%), Gaps = 30/171 (17%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFL+H HSDH GL+S W+ GP++CS++TA L + +D + LD +
Sbjct: 405 EGCKAYFLSHFHSDHYVGLTSTWSHGPIYCSKVTANLVRQQL-RVDPKYVVPLDFEASFE 463
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC----------LLYTGDFR 122
+ V+V I ANHCPG S + LF G +L+ GDFR
Sbjct: 464 VPGTR-------GVKVTMISANHCPG----SSLYLFEKVVGKKQSGEPRSQRILHCGDFR 512
Query: 123 WEASNERAEIG------RNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
A E R+ L ++ +D+ YLD TY N YAFPS+EV
Sbjct: 513 --ACRMHVEHPLLMPHVRDKLAGTTREQKIDVCYLDTTYLNPKYAFPSQEV 561
>gi|45188123|ref|NP_984346.1| ADR250Cp [Ashbya gossypii ATCC 10895]
gi|44982940|gb|AAS52170.1| ADR250Cp [Ashbya gossypii ATCC 10895]
gi|374107561|gb|AEY96469.1| FADR250Cp [Ashbya gossypii FDAG1]
Length = 473
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 84/155 (54%), Gaps = 26/155 (16%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFL+H H+DH QGL +W +GPL+CS +TA+L KF + LI VL G H IS +
Sbjct: 83 YFLSHFHADHYQGLCPSWKQGPLYCSAITARLAMHKF-KIPQELITVLYPGVPHKISPI- 140
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFR--GDFG----CLLYTGDFRWEASNERAE 131
+ I +DANHCPG S++LLF D G +L+TGDFR S E
Sbjct: 141 --------LRCIPLDANHCPG----SLILLFEEFDDQGHVRQSILHTGDFRATPSMA-TE 187
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
+ + T + +D +YLD TY + Y FP +E
Sbjct: 188 LSQLTGSRP-----IDTVYLDTTYLHPYYHFPLQE 217
>gi|219110329|ref|XP_002176916.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411451|gb|EEC51379.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 684
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 13/157 (8%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSIS 74
+Q YFLTH HSDH G+S AW G ++CS TA L + G+D + L + +
Sbjct: 445 TQNYFLTHFHSDHYGGISKAWNAGTIYCSFSTANLVNQQL-GVDRKFLHPLPMMT----P 499
Query: 75 VVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGR 134
+V S G+ V V +DANHCPG +VM LF LL+ GDFRW +A+
Sbjct: 500 IVVASRGKP--VTVTLLDANHCPG----AVMFLFEVGNRRLLHVGDFRWNREIMQAQGPL 553
Query: 135 NTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ 171
++ +D ++LD TYC+ Y+ P ++ A ++
Sbjct: 554 RPFFDRTQN--LDEIFLDTTYCDPKYSLPDQQEAIKE 588
>gi|145348221|ref|XP_001418554.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578783|gb|ABO96847.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 182
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGL-----SSAWARGPLFCSRLTAKLFPLKFPG 56
+++D W S + +F TH H+DH GL S A A G +FC+ +T ++ ++P
Sbjct: 19 VTIDFWAPTSATNVRAHFCTHAHADHVVGLGRRGWSPARAGGKIFCTEITREVLVRRWPT 78
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
L R L++G +I + + T V V IDA HCPG S M+L G G +L
Sbjct: 79 LGRHA-RALEVGEPTAIRLTA-----NTTVTVTLIDAGHCPG----SAMVLIDGPRGRVL 128
Query: 117 YTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+TGDFR E RA + R + +D LYLDNTY + + FP R A ++
Sbjct: 129 HTGDFRREDFGTRAALPR-----CVTRAPIDALYLDNTYAHPTCVFPDRGSATAEV 179
>gi|328769438|gb|EGF79482.1| hypothetical protein BATDEDRAFT_1998, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 346
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 30/198 (15%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G YFLTH HSDH GL ++ GP++CS +TA L + G+D S++ + +
Sbjct: 26 GCTAYFLTHFHSDHYGGLKKSFNSGPIYCSHITANLVAQQL-GVDRSMLHTIPLN----- 79
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-------GDFGCLLYTGDFRWEAS 126
+ E ++V IDANHCPG SV++LF + +L+TGDFR +S
Sbjct: 80 -----TRTEIQGIQVTFIDANHCPG----SVIILFEIPSVDAMQNNRNVLHTGDFRVHSS 130
Query: 127 N-ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLL 185
+ L++ +D +YLD TYCN Y FP ++ I + P + + ++
Sbjct: 131 HFTHPSFLSKPLIR------LDEIYLDTTYCNPKYIFPLQDAVIASI-LRPPLCKILVVV 183
Query: 186 GFHDIFTTKTSLTRVRAV 203
G + I K L +A+
Sbjct: 184 GTYTIGKEKVFLAMSKAI 201
>gi|121716440|ref|XP_001275809.1| DNA repair protein Pso2/Snm1, putative [Aspergillus clavatus NRRL
1]
gi|119403966|gb|EAW14383.1| DNA repair protein Pso2/Snm1, putative [Aspergillus clavatus NRRL
1]
Length = 847
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 34/171 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF--PLKFPG---LDLSLIRVLDI 67
EG YFL+H HSDH GL+++W GP++CSR TA L LK G +DL + ++
Sbjct: 431 EGCNAYFLSHYHSDHYIGLTASWRHGPIYCSRATANLVRQQLKVNGRWLVDLEFEKKTEV 490
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTG 119
P + + V+V I+ANHCPG S + LF G +L+ G
Sbjct: 491 ----------PGTND---VQVTMIEANHCPG----SAIFLFEKSIGSGSSARVQRILHCG 533
Query: 120 DFRWEASNERAEIGR----NTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
DFR ++ + + R + + + +D+ YLD TY + YAFPS+E
Sbjct: 534 DFRASPTHVQHSLLRPDIDDPITGERRQQKIDVCYLDTTYMSPKYAFPSQE 584
>gi|348687557|gb|EGZ27371.1| hypothetical protein PHYSODRAFT_472505 [Phytophthora sojae]
Length = 569
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 153/341 (44%), Gaps = 77/341 (22%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS--W 70
+ S +YFLTH HSDH GL + G ++C+ +TAKL +++ L + S
Sbjct: 244 QNSSIYFLTHFHSDHYGGLDKHFDCGIIYCNEITAKL-----------VVQELGVLSKYV 292
Query: 71 HSISVVSPS-SGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRW----- 123
H + + +P G+ V+V +DANHCPG S ++LFR D L+TGDFR+
Sbjct: 293 HPVGMNTPVLVGD---VQVTFMDANHCPG----SAIILFRLKDGKTYLHTGDFRFHRKML 345
Query: 124 -------EASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWP 176
+ +I N + L +D +YLD TYC+ Y FP+++VA
Sbjct: 346 DYHALQPHIATGDEKIDHNGKIVGLSR--LDGVYLDTTYCDPKYTFPTQQVAVNHALELM 403
Query: 177 ER----LQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPW 232
++ + ++L G + I + + R ++ + ++ + T G W
Sbjct: 404 DKHFKQEKVLYLFGSYTIGKERLFMEVAR---KFQKKVCVSKAKLKIIETFG-------W 453
Query: 233 VVKPLKGGGSLPGS------------------LFSSYQSK------WRATGGTQTEKLKE 268
K ++ + PG+ L + ++ + +R TG T + K
Sbjct: 454 PAKDMQLLTTEPGATNLHVVRMQDLQMDNLTVLLAKHRLRFRRIVAFRPTGWTFSSKNPR 513
Query: 269 ALGSV--DRFHK-YIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
++ + D K ++Y +PYS+HS F E+ +F+ +V P I
Sbjct: 514 SISTCCTDPSGKIHVYGIPYSEHSSFAELCDFVQVVNPHAI 554
>gi|326520423|dbj|BAK07470.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 434
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 24/155 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H H+DH GL+ W GP++C+ +TA+L + +D + + L++ + +
Sbjct: 187 EGCYAYFLSHFHNDHYGGLTKKWCHGPIYCTAITARLVKMLL-SIDSAYVCPLELDTEYV 245
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERAE 131
I V+V ++ANHCPG + ++ FR D L+TGDFR S +
Sbjct: 246 ID----------GVKVTFLEANHCPG----AALIHFRLSDGKTYLHTGDFRASKSMQ--- 288
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
L L+ + +LYLD TYCN Y FP +E
Sbjct: 289 -----LHPLLQTGRISLLYLDTTYCNPKYKFPPQE 318
>gi|449297636|gb|EMC93654.1| hypothetical protein BAUCODRAFT_76521 [Baudoinia compniacensis UAMH
10762]
Length = 649
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 85/173 (49%), Gaps = 34/173 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G Q YFL+H HSDH GL+S+W+ GP++CS +TA L + L + V+D+
Sbjct: 201 QGCQAYFLSHFHSDHYIGLTSSWSHGPIYCSHVTANLVRQQ---LRVDPKYVVDLEFEQP 257
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC----------LLYTGDFR 122
I V V+V I ANHCPG S + LF G +L+ GDFR
Sbjct: 258 IEVPGTRG-----VKVTMIPANHCPG----SSLYLFEKVVGKKTNGEPRLQRILHCGDFR 308
Query: 123 WEASNERAEIGRNTLVKALKDDV--------VDILYLDNTYCNSSYAFPSREV 167
RA I L+ ++D + +D+ YLD TY N YAFPS++
Sbjct: 309 ----ACRAHIEHPLLMPEVQDKISGKTREQKIDVCYLDTTYLNPKYAFPSQQT 357
>gi|224011619|ref|XP_002295584.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583615|gb|ACI64301.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 352
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 151/349 (43%), Gaps = 73/349 (20%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSIS 74
S+ YFLTH HSDH G++ W+ G ++CS TA L + G+D + H +
Sbjct: 25 SENYFLTHFHSDHYGGITKNWSEGTIYCSLPTANLVNDQL-GVDRRYL--------HPLP 75
Query: 75 VVSPS--SGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
+ +P+ + + T + V +DANHCPG ++M LF +L+ GDFRW + +
Sbjct: 76 MNTPTIIASKGTPITVTLLDANHCPG----AIMFLFEVGNKKILHVGDFRWNSE----LM 127
Query: 133 GRNTLVKALK--DDVVDILYLDNTYCNSSYAFPS-------------REVAAQQIWVWPE 177
R ++A + +D ++LD TYCN Y P+ REVA + E
Sbjct: 128 LRMPQLRAFSQLNPRLDEIFLDTTYCNPKYTLPTQEEAIAAAIEVAEREVATAKR----E 183
Query: 178 RLQTMHLLGFHDIFTTKTSLT-------RVRAVPRYSFSIDTLE---------SLNTMHP 221
+ +T+ L G + I K L+ +V R + LE + N
Sbjct: 184 KTKTLFLFGSYTIGKEKIYLSVAERLKLKVYVDKRRYRILSALEWPKERMNMFTTNKTES 243
Query: 222 TIGIMPSG---LPWVVKPLKGGG-----SLP----------GSLFSSYQSKWRATGGTQT 263
+ ++P G + + + G S P G +SS + + + +
Sbjct: 244 CLWVVPLGQVNFKQMREFMDEGNKNNVFSAPYGRVVGFRPTGWTYSSPKKSTKPFSTSPS 303
Query: 264 EKLKEALGSVDRFHKY-IYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVS 311
+K L S +Y ++ VPYS+HS F E+ + L ++P I VS
Sbjct: 304 KKSGRNLISTKTSGRYAVHGVPYSEHSSFPELVDCLRQLKPKKIIATVS 352
>gi|336274062|ref|XP_003351785.1| hypothetical protein SMAC_00330 [Sordaria macrospora k-hell]
gi|380096065|emb|CCC06112.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1048
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 85/164 (51%), Gaps = 21/164 (12%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G + YFL+H HSDH GLS++W GP++CS++T L + L + V+++ +
Sbjct: 534 QGCKAYFLSHFHSDHYMGLSASWVHGPIYCSKVTGSLVKTQ---LRTAAKYVVELEFGET 590
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------LLYTGDFR-WEA 125
+ V P +G V V I+ANHCPG S + LF G +L+ GDFR A
Sbjct: 591 VPV--PQTG--GAVMVTMIEANHCPG----SSLFLFEKQVGKEGRTQRILHCGDFRACPA 642
Query: 126 SNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSSYAFPSRE 166
E + TL K + +D+ YLD TY N Y+FP +E
Sbjct: 643 HVEHPLLKPETLDKVTGKTRQQKIDVCYLDTTYLNPRYSFPPQE 686
>gi|440906804|gb|ELR57026.1| Protein artemis [Bos grunniens mutus]
Length = 710
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 95/187 (50%), Gaps = 38/187 (20%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVCLYCSPV 64
Query: 46 TAKLFPLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P R+L +I + IS+V +SGEK + V + A HCPG S
Sbjct: 65 TKELL-LTSPKYRFWEKRILSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
VM LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+CN
Sbjct: 120 VMFLFQGNNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IQSVYLDTTFCNPKY 173
Query: 160 YAFPSRE 166
Y PSRE
Sbjct: 174 YQIPSRE 180
>gi|170056694|ref|XP_001864146.1| artemis protein [Culex quinquefasciatus]
gi|167876433|gb|EDS39816.1| artemis protein [Culex quinquefasciatus]
Length = 397
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 91/174 (52%), Gaps = 22/174 (12%)
Query: 6 ISVDRWTEG----SQVYFLTHLHSDHTQGLSSAWA-RGPLFCSRLTAKLFPLKFPGLDLS 60
ISVDR+TE S V+FL+H H+DH QGL GP++ S ++A ++P L
Sbjct: 14 ISVDRFTEANRTKSAVFFLSHCHTDHMQGLQDPEPLPGPIYTSSISAVFLKHRYPQL-AD 72
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTG 119
IR LD+G + + P+ T + V + A HCPG SVM LF + +LYTG
Sbjct: 73 CIRTLDLG---TTPIDMPTGSNPTHLTVTTLPAGHCPG----SVMFLFETERDRKILYTG 125
Query: 120 DFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYA-FPSREVAAQQI 172
DFR + R+ + L+ + +LYLD T+ N +Y FPS+ + +I
Sbjct: 126 DFRLSPKDLRS-------LLPLQSITLHVLYLDTTFFNRTYTYFPSQSESLAKI 172
>gi|120537811|gb|AAI29477.1| Dclre1a protein [Danio rerio]
Length = 431
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 147/328 (44%), Gaps = 56/328 (17%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GL A P++C+++T+ L K +D I VL + +
Sbjct: 97 EGVTAYFLTHFHSDHYGGLKKDSAV-PIYCNKVTSNLVKSKLK-VDEQYIHVLPMNTECI 154
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF-RGDFGCLLYTGDFRWEASNERAE 131
+ V+V +DANHCPG +VMLLF D +L+TGDF+ + S ER
Sbjct: 155 VQ----------GVKVTLLDANHCPG----AVMLLFVLPDGQTVLHTGDFQADPSMER-- 198
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---- 179
L+ + LYLD TYC+ Y FP+++ A +++ + P L
Sbjct: 199 ------YPELQGLRIQTLYLDTTYCSPEYTFPTQQEVVTFAVNTAFERVTLNPRTLVVCG 252
Query: 180 -----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSG----L 230
+ L ++ ++K L++ +Y+ ++ LES + S L
Sbjct: 253 TYSVGKEKVFLAVSEVLSSKVCLSK----DKYN-TMCCLESEDIGQRITTNWQSAQVHVL 307
Query: 231 PWVVKPLKGGGSLPGSLFSSYQS--KWRATGGT--QTEKLKEALGSVDRFHKYIYSVPYS 286
P + K + Y ++ TG T QT + + L + + IY +PYS
Sbjct: 308 PMMQINFKNLQTHLKKFSKKYDQLVAFKPTGWTFNQTVGVDDILPQT-QGNISIYGIPYS 366
Query: 287 DHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
+HS F E++ F+ ++P I V+ S
Sbjct: 367 EHSSFLELKRFVQWLRPKKIIPTVNVGS 394
>gi|325185791|emb|CCA20296.1| DNA crosslink repair protein putative [Albugo laibachii Nc14]
Length = 662
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 152/337 (45%), Gaps = 65/337 (19%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSIS 74
S VYFLTH HSDH GL+ + G ++CS++TA L +K +D I ++ + + I
Sbjct: 335 SSVYFLTHFHSDHYIGLTKKFDAGTIYCSQITANLVMMKL-RVDAKYICIVAMNTPIFIH 393
Query: 75 VVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRW-----EASNE 128
VEVI +DANHCPG + ++LFR + L+TGDFR+ E
Sbjct: 394 G----------VEVIFLDANHCPG----ACIILFRQKNEMSFLHTGDFRFHPRMLEYPAL 439
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPER----LQTMHL 184
R + + + ++ + +YLD TY S + F +E+ + + E+ + M++
Sbjct: 440 RPFVDQESTQNEMQR--LSGVYLDTTYAKSKFDFAPQEIVIKHVVGLMEKHYSTQRQMYI 497
Query: 185 LGFHDI------------FTTKTSLT--RVRAVPRYSFSIDTLESLNTMHPTIGIMPSG- 229
G + I F K ++ + R + Y + + ++ + T SG
Sbjct: 498 FGTYTIGKERVFMEVAKHFGKKMCVSKEKFRVLSCYGWDKEDMDFITT--------DSGD 549
Query: 230 LPWVVKPLKG--GGSLPGSLFSSYQSK------WRATG----GTQTEKLKEALGSVDRFH 277
+ V P+ L G L SY ++ +R TG G K + DRF
Sbjct: 550 TCFFVMPMHSLRMDRLSG-LLRSYSNRFDRVVAFRPTGWTFQGANASLSKLQKDASDRFR 608
Query: 278 KYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
+Y +PYS+HS F+E+ +F+ +P I V+ S
Sbjct: 609 --VYGIPYSEHSSFSELCQFVKAFKPKTIIPTVNCRS 643
>gi|22023557|gb|AAM89124.1| SNM1-like protein [Rattus norvegicus]
Length = 697
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 162/381 (42%), Gaps = 78/381 (20%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGLRAPSMKRRLECSLKVFLYCSPVTKELL 69
Query: 51 PLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P + I ++I + +S+V +SGEK V V + A HCPG SVM LF
Sbjct: 70 -LTSPKYKFWENRIIAIEIETPTQVSLVDEASGEKEEVVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G G +LYTGDFR + E+ R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGSNGTVLYTGDFRL----AKGEVSRMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 REVAAQQI------W--------VWPERLQTMHLLGFHDIFTTKTS----LTRVRAVPRY 206
RE + + W VW L G+ +FT + V + +
Sbjct: 179 REECLRGVLELVRSWITRSPKHVVW---LNCKAAYGYEYLFTNLSEELGVQVHVDKLDMF 235
Query: 207 SFSIDTLESLNT---------MHPTI------GIMPSGLPWVVKPLKGGGSLPGSLFSSY 251
D L L T HP +P G+ K + S+ S
Sbjct: 236 KNMPDILHHLTTDRNTQIHACRHPKAEEYFQWNKLPCGMASKTKTVLHTISIKPSTM--- 292
Query: 252 QSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVS 311
W G +T K + R + Y +S HS ++EI++FL+ + P N V
Sbjct: 293 ---W---FGERTRK----TNVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPNVI 342
Query: 312 SSSCYVDPLYYFGR-LCRANQ 331
VD + F + LCR++Q
Sbjct: 343 PIGLTVDKVMDFLKPLCRSSQ 363
>gi|162135927|ref|NP_671486.2| protein artemis [Rattus norvegicus]
gi|71153328|sp|Q5XIX3.1|DCR1C_RAT RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein; AltName: Full=SNM1-like protein
gi|54035286|gb|AAH83546.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Rattus
norvegicus]
Length = 698
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 162/381 (42%), Gaps = 78/381 (20%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGLRAPSMKRRLECSLKVFLYCSPVTKELL 69
Query: 51 PLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P + I ++I + +S+V +SGEK V V + A HCPG SVM LF
Sbjct: 70 -LTSPKYKFWENRIIAIEIETPTQVSLVDEASGEKEEVVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G G +LYTGDFR + E+ R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGSNGTVLYTGDFRL----AKGEVSRMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 REVAAQQI------W--------VWPERLQTMHLLGFHDIFTTKTS----LTRVRAVPRY 206
RE + + W VW L G+ +FT + V + +
Sbjct: 179 REECLRGVLELVRSWITRSPKHVVW---LNCKAAYGYEYLFTNLSEELGVQVHVDKLDMF 235
Query: 207 SFSIDTLESLNT---------MHPTI------GIMPSGLPWVVKPLKGGGSLPGSLFSSY 251
D L L T HP +P G+ K + S+ S
Sbjct: 236 KNMPDILHHLTTDRNTQIHACRHPKAEEYFQWNKLPCGMASKTKTVLHTISIKPSTM--- 292
Query: 252 QSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVS 311
W G +T K + R + Y +S HS ++EI++FL+ + P N V
Sbjct: 293 ---WF---GERTRK----TNVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPNVI 342
Query: 312 SSSCYVDPLYYFGR-LCRANQ 331
VD + F + LCR++Q
Sbjct: 343 PIGLTVDKVMDFLKPLCRSSQ 363
>gi|453089242|gb|EMF17282.1| DRMBL-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 911
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 82/168 (48%), Gaps = 26/168 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G Q YFL+H HSDH GL+S W GP++CS++TA L + L + I V+ +
Sbjct: 466 QGCQAYFLSHFHSDHYIGLTSTWTHGPIYCSKVTANLVKQQ---LRVDPIYVVPLEFEQQ 522
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC----------LLYTGDFR 122
+ V V+V I ANHCPG S + LF G +L+ GDFR
Sbjct: 523 VEVPGTRG-----VKVTMISANHCPG----SSLYLFEKTLGVKQNGEARAQRILHCGDFR 573
Query: 123 -WEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSSYAFPSRE 166
+ E + + L K K+ +D+ YLD TY N YAFP +E
Sbjct: 574 ACKMHIEHPLLMPDVLDKVSGKTKEQKIDVCYLDTTYLNPKYAFPDQE 621
>gi|317419410|emb|CBN81447.1| DNA cross-link repair 1A protein [Dicentrarchus labrax]
Length = 943
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 141/330 (42%), Gaps = 59/330 (17%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GL+ + P++C+R+T L K + I +L + + +
Sbjct: 623 EGITAYFLTHFHSDHYGGLTKN-STLPIYCNRITGNLVKTKL-KVAEQYIHILPMNTEVT 680
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
+ V+ VI ++ANHCP G +++L F D +L+TGDFR + S E
Sbjct: 681 VEGVT----------VILLEANHCP---GAAMLLFFLPDGQTVLHTGDFRADPSME---- 723
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL----- 179
L V LYLD TYC+ Y FP ++ A + + + P L
Sbjct: 724 ----TYPELVSCRVQTLYLDTTYCSPEYTFPRQQEVINFAASTAFELVTLNPRTLVVCGS 779
Query: 180 ----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPS------- 228
+ L ++ TK L+R + +T+ L + H I
Sbjct: 780 YSVGKEKVFLALAEVLGTKVCLSRDK--------YNTMCCLESEHVKQRITTDWKAAQVH 831
Query: 229 GLPWVVKPLKGGGSLPGSLFSSYQS--KWRATGGTQTEKLK--EALGSVDRFHKYIYSVP 284
LP + K Y ++ TG T +++++ E + + IY +P
Sbjct: 832 VLPMMQLSFKKLQDYLARFSRQYDQLVAFKPTGWTFSQQVESVEDIQPQISGNISIYGIP 891
Query: 285 YSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
YS+HS F E++ F+ +QP I V++ S
Sbjct: 892 YSEHSSFLEMKRFVQWLQPLKIIPTVNNGS 921
>gi|339245771|ref|XP_003374519.1| DNA cross-link repair 1A protein [Trichinella spiralis]
gi|316972306|gb|EFV55989.1| DNA cross-link repair 1A protein [Trichinella spiralis]
Length = 517
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 156/352 (44%), Gaps = 80/352 (22%)
Query: 16 QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
++YFL+H H DH GL+ + P+ CS++TA L LK + S +RVL + W +
Sbjct: 177 ELYFLSHFHYDHYVGLTRHFD-APICCSQITASLVHLKL-KVPKSFLRVLSVNEWIDL-- 232
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERAEIGR 134
G+ VI IDANHCPG +VM LF + +L+TGDFR E +
Sbjct: 233 -----GDDN--SVILIDANHCPG----AVMFLFHLKNDHYVLHTGDFRAERV-----VLD 276
Query: 135 NTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMH-----LLGFHD 189
N + +++ VD LYLD TY N +Y FP + VA ++ +++Q H L+G ++
Sbjct: 277 NPIWSSIR---VDYLYLDTTYFNPAYIFPCQMVAITKMISIVKQIQQQHNKLLILVGTYE 333
Query: 190 -----IFTT------------KTSLTRVRAV--PRYSFSIDTLESLNTMHPTIGIMPSGL 230
IFT K + ++ + S S+ L+S +H ++ G+
Sbjct: 334 VGKERIFTALAEALDCKVAVEKNKMQTLKCFDDKKLSDSLTLLKSSTFLH----VVSMGV 389
Query: 231 PWVVKPLKGGGSLPG--SLFSSYQSKWRATGGTQ-----TEKLKEALGSVDRFHKYIY-- 281
K S P L + + W +G T+ +K+ + RF IY
Sbjct: 390 LNRQKLTAYLASYPTYEHLVAIKPTGWEFSGRTEDNLIDVQKMNKITILGKRFIFRIYVL 449
Query: 282 -------------------SVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
VPYS+HS F E+++F+ ++P + V+ S+
Sbjct: 450 QYVGCGPESLRNFSGKASARVPYSEHSSFAELKQFVLKLRPKQVVPTVNVSA 501
>gi|154152069|ref|NP_001093847.1| protein artemis [Bos taurus]
gi|151554853|gb|AAI48007.1| DCLRE1C protein [Bos taurus]
gi|296481454|tpg|DAA23569.1| TPA: DNA cross-link repair 1C [Bos taurus]
Length = 710
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 38/187 (20%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVCLYCSPV 64
Query: 46 TAKLFPLKFPGLDLSLIRV--LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P R+ ++I + IS+V +SGEK + V + A HCPG S
Sbjct: 65 TKELL-LTSPKYRFWEKRIVSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
VM LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+CN
Sbjct: 120 VMFLFQGNNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IQSVYLDTTFCNPKY 173
Query: 160 YAFPSRE 166
Y PSRE
Sbjct: 174 YQIPSRE 180
>gi|343428562|emb|CBQ72092.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 871
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 82/165 (49%), Gaps = 23/165 (13%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFLTH HSDH G+++ W GP++CS TA L G+D +R L +
Sbjct: 275 EGCRGYFLTHFHSDHYGGMTANWNHGPIYCSVTTANLCRTHL-GVDPQWLRPLPM----E 329
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL--------YTGD---F 121
++V P SG V V I+ANHCPG S + LF G L Y G F
Sbjct: 330 VAVAVPDSG---GVMVTCIEANHCPG----SCLFLFEGPQTSQLLSRNHASPYIGTGRIF 382
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
R+ + +T ++ +DI+YLD TYCN Y FP+++
Sbjct: 383 RYLHCGDFRASPVHTNHPSIAGKKLDIIYLDTTYCNPRYCFPAQD 427
>gi|398022602|ref|XP_003864463.1| hypothetical protein, conserved [Leishmania donovani]
gi|322502698|emb|CBZ37781.1| hypothetical protein, conserved [Leishmania donovani]
Length = 812
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 105/244 (43%), Gaps = 81/244 (33%)
Query: 4 GLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIR 63
GL S R YFL+H HSDH G+++ W G ++CSR TA L + G+ S +
Sbjct: 89 GLASTSRAARAHTFYFLSHFHSDHYAGITNRWHSGTIYCSRPTATLTQSQL-GVPASWLF 147
Query: 64 VLDIGSW---------------------HSISVVSPSSG-------EKT----FVEVIAI 91
+D+G H S++SP + EKT FV V I
Sbjct: 148 PMDLGQTYIFSLSTGVCLARVPETPHHPHVQSLLSPPAASSKGQAQEKTVDGMFV-VRLI 206
Query: 92 DANHCPGILGCSVMLLFRGD-FGCLLYTGDFRWEASNE------RAEIGRNTLV------ 138
ANHCPG +VM LF FG +L+TGDFR+ S E R+ GR T V
Sbjct: 207 PANHCPG----AVMFLFVSPVFGTVLHTGDFRFNGSRETWEQFVRSSNGRQTYVPPLPCL 262
Query: 139 --------------------------KALKD----DVVDILYLDNTYCNSSYAFPSREVA 168
+AL+D ++D+L LDNT+C +Y FPS+
Sbjct: 263 IKRGEEQHASTAAPPAPAYEQFIADDEALRDVAQRQLLDVLLLDNTFCAPAYKFPSQWEV 322
Query: 169 AQQI 172
Q++
Sbjct: 323 TQRV 326
>gi|354468024|ref|XP_003496467.1| PREDICTED: protein artemis-like [Cricetulus griseus]
Length = 688
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 161/386 (41%), Gaps = 88/386 (22%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVFLYCSPV 64
Query: 46 TAKLFPLKFPGLDLSLIRV--LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P RV ++I + I++V +SGEK V V + A HCPG S
Sbjct: 65 TKELL-LTSPKYRFWEKRVVTIEIETPTQIALVDEASGEKEEVVVTLLPAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
VM LF+G G +LYTGDFR + E R L+ + +KD + +YLD T+C+
Sbjct: 120 VMFLFQGSNGTVLYTGDFRL----AKGEASRMELLHSGGRVKD--IQSVYLDTTFCDPRF 173
Query: 160 YAFPSREVAAQQI------W--------VWPERLQTMHLLGFHDIFTTKTS----LTRVR 201
Y PSRE + I W VW L G+ +FT + V
Sbjct: 174 YQIPSREECLKGILELVRSWITRSPHHVVW---LNCKAAYGYEYLFTNLSEELGVQVHVD 230
Query: 202 AVPRYSFSIDTLESLNT---------MHPTI------GIMPSGLPWVVKPLKGGGSLPGS 246
+ + D L L T HP +P G+ K + S+ S
Sbjct: 231 KMDMFRNMPDILHHLTTDRNTQVHACRHPKAEEYFQWNKLPCGITSKNKAMLHTISIKPS 290
Query: 247 LFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
W G +T K + R + Y +S HS ++EI++FL+ + P N
Sbjct: 291 TM------W---FGERTRK----TNVIARTGESSYRACFSFHSSYSEIKDFLSYICPVNA 337
Query: 307 RGIVSSSSCYVDPLYYFGR-LCRANQ 331
V VD + F + LCR++Q
Sbjct: 338 YPNVIPIGLTVDKVMEFLKPLCRSSQ 363
>gi|345310055|ref|XP_001515535.2| PREDICTED: protein artemis [Ornithorhynchus anatinus]
Length = 700
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 91/177 (51%), Gaps = 35/177 (19%)
Query: 9 DRWTEGSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRLTAKLFPLKFP 55
DR ++ YFL+H H DH +GL R P L+CS +T +L L P
Sbjct: 20 DRENLAARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVYLYCSPVTKELL-LTSP 73
Query: 56 GLDLSLIRV--LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG 113
R+ L++ + IS+ ++GEK +EV + A HCPG SVM LF+G+ G
Sbjct: 74 KYRFWENRIISLEVETPTQISLTDEATGEKEEIEVTLLPAGHCPG----SVMFLFQGNRG 129
Query: 114 CLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPSRE 166
+LYTGDFR + E+ R L+ + +KD + +YLD T+C+ Y PSRE
Sbjct: 130 TVLYTGDFRL----AKGEVARMELLHSGSRVKD--IQSVYLDTTFCDPKFYQIPSRE 180
>gi|367042878|ref|XP_003651819.1| hypothetical protein THITE_2112528 [Thielavia terrestris NRRL 8126]
gi|346999081|gb|AEO65483.1| hypothetical protein THITE_2112528 [Thielavia terrestris NRRL 8126]
Length = 984
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 20/162 (12%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG Q YFL+H HSDH GL+++W GP++CS++T L + L + V+++ +
Sbjct: 488 EGCQAYFLSHFHSDHYIGLTASWTHGPIYCSKVTGSLVKSQ---LKTAAKYVVELEFEKT 544
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC----LLYTGDFRWEASNE 128
+ V + V V I ANHCPG S + LF G +L+ GDFR ++
Sbjct: 545 VPVP-----QTNGVTVTMIPANHCPG----SSLFLFEKTTGGRTQRILHCGDFRACPAHV 595
Query: 129 RAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSRE 166
R V A+ K +D+ YLD TY N Y+FP ++
Sbjct: 596 EHPKLRPETVDAISGRTKQQKIDVCYLDTTYLNPRYSFPPQD 637
>gi|195109660|ref|XP_001999401.1| GI24489 [Drosophila mojavensis]
gi|193915995|gb|EDW14862.1| GI24489 [Drosophila mojavensis]
Length = 662
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 138/319 (43%), Gaps = 60/319 (18%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFL+H H+DH GL+ +A PL+ S +TAKL P +D + +++G SI++
Sbjct: 266 YFLSHYHADHYVGLTRKFAH-PLYMSPITAKLVRTFIP-IDNQYMHEIEVG--ESITL-- 319
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
+EV AIDANHCPG ++ML+F+ G C+L+TGDFR E I N
Sbjct: 320 ------NEIEVTAIDANHCPG----AIMLMFKFTTGKCILHTGDFRASFEMESLPIFWN- 368
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSR-------EVAAQQIWVWPERLQTMHLLGFHD 189
+ +D+LYLD TY + +Y F + A +Q + +H+ G +
Sbjct: 369 ------EPQIDVLYLDTTYLSKNYDFCHQSDSIDRIRTAVRQFHEKNADKRILHVCGSYL 422
Query: 190 IFTTKTSLT-------RVRAVPRYSFSIDTLE------SL--NTMHPTIGIMPSG---LP 231
I K L RV P +ID L+ SL N + + ++ G P
Sbjct: 423 IGKEKVWLALVEEFSLRVWTEPHRRKAIDCLDWPELQLSLCDNPLEANLHVINMGKISYP 482
Query: 232 WVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCF 291
+ + K L S W K +G V YS+HS +
Sbjct: 483 SLDQYFKAFEGHYDMLLGIRPSGWEKNSKPSYGKRISVIG-----------VEYSEHSSY 531
Query: 292 TEIEEFLNLVQPSNIRGIV 310
E+E F+ ++P+ + V
Sbjct: 532 KELERFVRFLKPNKVISTV 550
>gi|71006690|ref|XP_758011.1| hypothetical protein UM01864.1 [Ustilago maydis 521]
gi|46097512|gb|EAK82745.1| hypothetical protein UM01864.1 [Ustilago maydis 521]
Length = 866
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 82/173 (47%), Gaps = 39/173 (22%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFLTH HSDH G+++ W GP++CS TA L G+D +R L +
Sbjct: 271 EGCRGYFLTHFHSDHYGGMTANWNHGPIYCSVTTANLCRTHL-GVDPQWLRPLPM----E 325
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------------------ 114
++V P SG V V I+ANHCPG S + LF G
Sbjct: 326 VAVPVPDSG---GVMVTCIEANHCPG----SCLFLFEGPQTSQLLSRNHASPYIGTGRIF 378
Query: 115 -LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
L+ GDFR + +T ++ +DI+YLD TYCN Y FP+++
Sbjct: 379 RYLHCGDFRASPA--------HTNHPSVAGKKLDIIYLDTTYCNPRYCFPAQD 423
>gi|268569792|ref|XP_002640615.1| Hypothetical protein CBG08727 [Caenorhabditis briggsae]
Length = 533
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 144/329 (43%), Gaps = 71/329 (21%)
Query: 6 ISVDRWTEGSQV--YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIR 63
ISVD + + S+ +FLTH HS+H +G+++ + ++CS+ TAK+ L+L +
Sbjct: 224 ISVDYFQQSSKCNYHFLTHAHSEHCRGINAKFPHK-VYCSKETAKI-------LNLIVGE 275
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF------GCLLY 117
L + + + P E +V AIDANHCPG +VM +F+G G +L
Sbjct: 276 PLPEDTIQPLDLNIPYKFEN--FQVTAIDANHCPG----AVMFVFQGPLIDEIAGGPILC 329
Query: 118 TGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ----QIW 173
TGDFR EAS R N + +KD +YLDNTY + AF SRE++ Q +I
Sbjct: 330 TGDFRAEASYMRQ--FENEKLGWVKDISFARIYLDNTYFSVDVAFTSREISEQLLQKEIM 387
Query: 174 VWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWV 233
P+ DI L + R + S+ I + I + P L
Sbjct: 388 NHPDA----------DIVLPLHQLGQERIIENLSYRI---------YEPIFVYPEKL--- 425
Query: 234 VKPLKGGGSLPGSLFS-SYQSKWRATGGTQTEKLKEALG---------SVDRFHKYIYS- 282
G + G + ++ R + ++ +ALG VD + +
Sbjct: 426 -----AIGKVLGFFYEYGIANQKRQIQVVEKREMPDALGKPIIVIEVTQVDHLYGGVSES 480
Query: 283 -----VPYSDHSCFTEIEEFLNLVQPSNI 306
VPYSDHS EI +FL Q + I
Sbjct: 481 DPNIRVPYSDHSSREEILKFLECFQFNEI 509
>gi|311705713|gb|ADQ01122.1| artemis [Lophocebus albigena]
Length = 687
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E+ R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEVARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|356991244|ref|NP_001239351.1| protein artemis [Papio anubis]
gi|311705721|gb|ADQ01126.1| artemis [Papio anubis]
Length = 687
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E+ R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEVARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|74147659|dbj|BAE38706.1| unnamed protein product [Mus musculus]
Length = 573
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 158/379 (41%), Gaps = 74/379 (19%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVFLYCSPV 64
Query: 46 TAKLFPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P + I ++I + IS+V +SGEK V V + A HCPG S
Sbjct: 65 TKELL-LTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
VM LF+G G +LYTGDFR + E R L+ + +KD + +YLD T+C+
Sbjct: 120 VMFLFQGSNGTVLYTGDFRL----AKGEASRMELLHSGGRVKD--IQSVYLDTTFCDPRF 173
Query: 160 YAFPSREVAAQQI------W--------VWPERLQTMHLLGFHDIFTTKTS----LTRVR 201
Y PSRE + I W VW L G+ +FT + V
Sbjct: 174 YQIPSREQCLRGILELVRSWVTRSPHHVVW---LNCKAAYGYEYLFTNLSEELGVQVHVD 230
Query: 202 AVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG-- 259
+ + D L L T T I P + + LP + S ++
Sbjct: 231 KLDMFKNMPDILHHLTTDRNT-QIHACRHPKAEECFQ-WNKLPCGITSQNKTALHTISIK 288
Query: 260 ------GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSS 313
G +T K + R + Y +S HS F+EI++FL+ + P N+ V
Sbjct: 289 PSTMWFGERTRK----TNVIVRTGESSYRACFSFHSSFSEIKDFLSYICPVNVYPNVIPV 344
Query: 314 SCYVDPLY-YFGRLCRANQ 331
VD + LCR+ Q
Sbjct: 345 GLTVDKVMDVLKPLCRSPQ 363
>gi|311705719|gb|ADQ01125.1| artemis [Trachypithecus francoisi]
Length = 681
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E+ R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEVARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|50550517|ref|XP_502731.1| YALI0D12166p [Yarrowia lipolytica]
gi|49648599|emb|CAG80919.1| YALI0D12166p [Yarrowia lipolytica CLIB122]
Length = 603
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 84/172 (48%), Gaps = 20/172 (11%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG +YFL+H H+DH GL +W GP+FC+ +TA L +K D L+ + H
Sbjct: 226 EGINLYFLSHFHADHYGGLRKSWNHGPIFCTPITAALCKMKLGVQDEWLVPI----PIHI 281
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
V VEVI DANHCPG + ++LF ++ GDFR + +
Sbjct: 282 PFCVGND------VEVIFFDANHCPG----AAVMLFTSPTKTAVHCGDFRANMN-----L 326
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHL 184
R +K LK +D +YLD TY S+AFPS+ Q + RL + +
Sbjct: 327 VREIKLK-LKQRELDEVYLDTTYLGPSHAFPSQNRVVQVCADFCVRLNNLKM 377
>gi|324072804|ref|NP_001191279.1| protein artemis [Macaca mulatta]
gi|311705693|gb|ADQ01112.1| artemis [Macaca mulatta]
Length = 692
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E+ R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEVARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|452987795|gb|EME87550.1| hypothetical protein MYCFIDRAFT_27226 [Pseudocercospora fijiensis
CIRAD86]
Length = 677
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 85/173 (49%), Gaps = 34/173 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G Q YFL+H HSDH GL+S+W GP++CS++TA L + L + V+ + +
Sbjct: 252 KGCQAYFLSHFHSDHYVGLTSSWRHGPIYCSKVTANLVKQQ---LRVDPQYVIPLEFEKT 308
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC----------LLYTGDFR 122
I V G K V V I ANHCPG S + LF G +L+ GDFR
Sbjct: 309 IEV----PGTKG-VRVTMISANHCPG----SSLYLFEKTMGKHYNGNPRLQRILHCGDFR 359
Query: 123 WEASNERAEIGRNTLVKALKDDV--------VDILYLDNTYCNSSYAFPSREV 167
+ + L+ ++D V +D+ YLD TY N YAFPS+E
Sbjct: 360 ----ACKMHVQHPLLMPEVQDKVSGKSREQKIDVCYLDTTYLNPKYAFPSQEA 408
>gi|311705707|gb|ADQ01119.1| artemis [Miopithecus talapoin]
Length = 692
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E+ R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEVARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|158966680|ref|NP_666226.2| protein artemis isoform 1 [Mus musculus]
gi|71153326|sp|Q8K4J0.2|DCR1C_MOUSE RecName: Full=Protein artemis; Short=mArt; AltName: Full=DNA
cross-link repair 1C protein; AltName: Full=SNM1-like
protein
Length = 705
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 158/379 (41%), Gaps = 74/379 (19%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVFLYCSPV 64
Query: 46 TAKLFPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P + I ++I + IS+V +SGEK V V + A HCPG S
Sbjct: 65 TKELL-LTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
VM LF+G G +LYTGDFR + E R L+ + +KD + +YLD T+C+
Sbjct: 120 VMFLFQGSNGTVLYTGDFRL----AKGEASRMELLHSGGRVKD--IQSVYLDTTFCDPRF 173
Query: 160 YAFPSREVAAQQI------W--------VWPERLQTMHLLGFHDIFTTKTS----LTRVR 201
Y PSRE + I W VW L G+ +FT + V
Sbjct: 174 YQIPSREQCLRGILELVRSWVTRSPHHVVW---LNCKAAYGYEYLFTNLSEELGVQVHVD 230
Query: 202 AVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG-- 259
+ + D L L T T I P + + LP + S ++
Sbjct: 231 KLDMFKNMPDILHHLTTDRNT-QIHACRHPKAEECFQ-WNKLPCGITSQNKTALHTISIK 288
Query: 260 ------GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSS 313
G +T K + R + Y +S HS F+EI++FL+ + P N+ V
Sbjct: 289 PSTMWFGERTRK----TNVIVRTGESSYRACFSFHSSFSEIKDFLSYICPVNVYPNVIPV 344
Query: 314 SCYVDPLY-YFGRLCRANQ 331
VD + LCR+ Q
Sbjct: 345 GLTVDKVMDVLKPLCRSPQ 363
>gi|311705705|gb|ADQ01118.1| artemis [Macaca fascicularis]
Length = 692
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E+ R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEVARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|50311643|ref|XP_455848.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644984|emb|CAG98556.1| KLLA0F17094p [Kluyveromyces lactis]
Length = 513
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 82/153 (53%), Gaps = 27/153 (17%)
Query: 17 VYFLTHLHSDHTQGLSSAWARG-PLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
+YFL+H H+DH GL +W+ G ++ S TA L KF LI L + WHS+S
Sbjct: 149 LYFLSHFHADHYGGLKKSWSHGTTIYTSVYTANLVKWKFKVNQCKLIG-LSLNEWHSVS- 206
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF----RGDFGCLLYTGDFRWEASNERAE 131
V VI +DANHCPG SV+ LF R F +L+TGDFR +NER
Sbjct: 207 --------NEVRVILLDANHCPG----SVIFLFHDLRRNSF--VLHTGDFR---ANERII 249
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPS 164
N+L L+ + + ++YLD TY N + FP+
Sbjct: 250 TEVNSL---LQGNSLSLIYLDTTYLNPFFKFPA 279
>gi|148675984|gb|EDL07931.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_d [Mus musculus]
Length = 704
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 158/379 (41%), Gaps = 74/379 (19%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 19 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVFLYCSPV 73
Query: 46 TAKLFPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P + I ++I + IS+V +SGEK V V + A HCPG S
Sbjct: 74 TKELL-LTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPG----S 128
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
VM LF+G G +LYTGDFR + E R L+ + +KD + +YLD T+C+
Sbjct: 129 VMFLFQGSNGTVLYTGDFRL----AKGEASRMELLHSGGRVKD--IQSVYLDTTFCDPRF 182
Query: 160 YAFPSREVAAQQI------W--------VWPERLQTMHLLGFHDIFTTKTS----LTRVR 201
Y PSRE + I W VW L G+ +FT + V
Sbjct: 183 YQIPSREQCLRGILELVRSWVTRSPHHVVW---LNCKAAYGYEYLFTNLSEELGVQVHVD 239
Query: 202 AVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG-- 259
+ + D L L T T I P + + LP + S ++
Sbjct: 240 KLDMFKNMPDILHHLTTDRNT-QIHACRHPKAEECFQ-WNKLPCGITSQNKTALHTISIK 297
Query: 260 ------GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSS 313
G +T K + R + Y +S HS F+EI++FL+ + P N+ V
Sbjct: 298 PSTMWFGERTRK----TNVIVRTGESSYRACFSFHSSFSEIKDFLSYICPVNVYPNVIPV 353
Query: 314 SCYVDPLY-YFGRLCRANQ 331
VD + LCR+ Q
Sbjct: 354 GLTVDKVMDVLKPLCRSPQ 372
>gi|311705699|gb|ADQ01115.1| artemis [Cercopithecus wolfi]
Length = 692
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E+ R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEVARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|326911096|ref|XP_003201898.1| PREDICTED: LOW QUALITY PROTEIN: protein artemis-like [Meleagris
gallopavo]
Length = 714
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 95/178 (53%), Gaps = 28/178 (15%)
Query: 6 ISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARG--------PLFCSRLTAKLFPLKF 54
+S+DR+ ++ YFL+H H DH +GL + R L+CS +T +L L
Sbjct: 14 LSIDRFDHDNLRARAYFLSHCHKDHMKGLRAPALRRRLQSSLKVKLYCSPVTKELL-LTN 72
Query: 55 PGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
+ + I L++ + IS+V ++GEK +EV + A HCPG SVM LF+G+
Sbjct: 73 SKYEFWENHIVALEVETPTQISLVDETTGEKEDIEVTLLPAGHCPG----SVMFLFQGEN 128
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPSRE 166
G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PSRE
Sbjct: 129 GTVLYTGDFRL----AKGEAARMELLHSGTRVKD--IQSVYLDTTFCDPRFYHIPSRE 180
>gi|344277985|ref|XP_003410777.1| PREDICTED: protein artemis-like [Loxodonta africana]
Length = 691
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 159/377 (42%), Gaps = 68/377 (18%)
Query: 1 MEKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSR 44
+E IS+DR+ ++ YFL+H H DH +GL R P L+CS
Sbjct: 9 VEYPTISIDRFDRENLRARAYFLSHCHKDHMKGL-----RAPTLKRRLDCSLKVFLYCSP 63
Query: 45 LTAKLFPLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGC 102
+T +L L P R++ ++ + IS++ +SGEK + V + A HCPG
Sbjct: 64 VTKELL-LTSPKYRFWEKRIIAIEVETPTQISLIDEASGEKEEIVVTLLPAGHCPG---- 118
Query: 103 SVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS 159
SVM LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+
Sbjct: 119 SVMFLFQGNNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IQSVYLDTTFCDPR 172
Query: 160 -YAFPSREVAAQQIWV----WPER-------LQTMHLLGFHDIFTTKTS----LTRVRAV 203
Y PSRE I W R L G+ +FT + V +
Sbjct: 173 FYQIPSREECLSGILELVGGWINRSPYHVVWLNCKAAYGYEYLFTNLSEQFGVQVHVDKL 232
Query: 204 PRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG---- 259
+ D L L T T I P + + G LP + S +
Sbjct: 233 DMFRNMPDILHHLTTDRGT-QIHACRHPKAEEYFQ-GNKLPCGMTSRNRIPLHTISIKPS 290
Query: 260 ----GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSC 315
G +T K + R + Y +S HS ++EI++FL+ + P N V
Sbjct: 291 TMWFGERTRK----TNVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYANVIPVGT 346
Query: 316 YVDPLYYFGR-LCRANQ 331
VD + + LCR++Q
Sbjct: 347 TVDKVTEILKPLCRSSQ 363
>gi|317136872|ref|XP_001727344.2| DNA repair protein Pso2/Snm1 [Aspergillus oryzae RIB40]
Length = 826
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 25/165 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+++W GP++CS+ T L + L + V+D+ +
Sbjct: 411 EGCNAYFLSHYHSDHYIGLTASWRHGPIYCSKATGNLVRQQ---LKVDPRWVVDLEFEKT 467
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
V P++G V+V I+ANHCPG S + LF G +L+ GDFR
Sbjct: 468 TEV--PNTG----VQVTLIEANHCPG----SAIFLFEKAMGSGQSKRIQRVLHCGDFRAS 517
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
++ + + R +V ++ + +D+ YLD TY + Y+FPS+
Sbjct: 518 PTHVQHALLRPEIVDSVTGQKRQQRIDVCYLDTTYLSPKYSFPSQ 562
>gi|268564045|ref|XP_002639002.1| Hypothetical protein CBG22248 [Caenorhabditis briggsae]
Length = 599
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 93/173 (53%), Gaps = 24/173 (13%)
Query: 6 ISVDRWTEGSQV--YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIR 63
ISVD + + S+ +FLTH H+DH +G+S+ + ++CS+ TAK+ L L +
Sbjct: 223 ISVDYFVKSSKCNYHFLTHAHADHCRGISAKFP-NKVYCSKETAKI-------LHLVVGE 274
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF------GCLLY 117
L H + + P E ++V AIDANHCPG +VM +F+G G +L
Sbjct: 275 PLPEDLIHPLELNIPYKFEH--LQVTAIDANHCPG----AVMFVFQGPLIDEIAGGPVLC 328
Query: 118 TGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
TGDFR EAS R N + +KD +YLDNTY + AF SRE++ Q
Sbjct: 329 TGDFRAEASYMRQ--FENEKLSWVKDIDYSRIYLDNTYFSVDVAFTSREISEQ 379
>gi|339899168|ref|XP_001468662.2| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321398698|emb|CAM71749.2| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 812
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 105/244 (43%), Gaps = 81/244 (33%)
Query: 4 GLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIR 63
GL S R YFL+H HSDH G+++ W G ++CSR TA L + G+ S +
Sbjct: 89 GLASTSRAARAHTFYFLSHFHSDHYAGITNRWHSGTIYCSRPTATLTQSQL-GVPASWLF 147
Query: 64 VLDIGSW---------------------HSISVVSPSSG-------EKT----FVEVIAI 91
+D+G H +++SP + EKT FV V I
Sbjct: 148 PMDLGQTYIFSLSTGVCLARVPETPHHPHVQALLSPPAASSKGQAQEKTVDGMFV-VRLI 206
Query: 92 DANHCPGILGCSVMLLFRGD-FGCLLYTGDFRWEASNE------RAEIGRNTLV------ 138
ANHCPG +VM LF FG +L+TGDFR+ S E R+ GR T V
Sbjct: 207 PANHCPG----AVMFLFVSPVFGTVLHTGDFRFNGSRETWEQFVRSSNGRQTYVPPLSCL 262
Query: 139 --------------------------KALKD----DVVDILYLDNTYCNSSYAFPSREVA 168
+AL+D ++D+L LDNT+C +Y FPS+
Sbjct: 263 IKRGEEQHASTAAPPAPAYEQFIADDEALRDVAQRQLLDVLLLDNTFCAPAYKFPSQWEV 322
Query: 169 AQQI 172
Q++
Sbjct: 323 TQRV 326
>gi|238488711|ref|XP_002375593.1| DNA repair protein Pso2/Snm1, putative [Aspergillus flavus
NRRL3357]
gi|220697981|gb|EED54321.1| DNA repair protein Pso2/Snm1, putative [Aspergillus flavus
NRRL3357]
Length = 841
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 25/165 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+++W GP++CS+ T L + L + V+D+ +
Sbjct: 426 EGCNAYFLSHYHSDHYIGLTASWRHGPIYCSKATGNLVRQQ---LKVDPRWVVDLEFEKT 482
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
V P++G V+V I+ANHCPG S + LF G +L+ GDFR
Sbjct: 483 TEV--PNTG----VQVTLIEANHCPG----SAIFLFEKAMGSGQSKRIQRVLHCGDFRAS 532
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
++ + + R +V ++ + +D+ YLD TY + Y+FPS+
Sbjct: 533 PTHVQHALLRPEIVDSVTGQKRQQRIDVCYLDTTYLSPKYSFPSQ 577
>gi|367003601|ref|XP_003686534.1| hypothetical protein TPHA_0G02630 [Tetrapisispora phaffii CBS 4417]
gi|357524835|emb|CCE64100.1| hypothetical protein TPHA_0G02630 [Tetrapisispora phaffii CBS 4417]
Length = 680
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 81/158 (51%), Gaps = 34/158 (21%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS--WHSISV 75
YFL+H HSDH GL +W +G ++C+ +TAKL LKF L ++++L + W
Sbjct: 290 YFLSHFHSDHYIGLKKSWDQGIIYCTEVTAKLMELKF-NLTGDMVQILPLNEHFW----- 343
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG----------DFGCLLYTGDFRWEA 125
+ P ++ VIAIDANHCPG + + LF+ +L+TGDFR
Sbjct: 344 IEP------YLSVIAIDANHCPG----AAIFLFQEWDKAKLDTLPSLRQILHTGDFR--- 390
Query: 126 SNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFP 163
SN+ N +V + +D +YLD TY Y FP
Sbjct: 391 SNKSMIENINRIVNGIS---IDEIYLDTTYLTPGYHFP 425
>gi|406865971|gb|EKD19011.1| DNA cross-link repair protein pso2/snm1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1022
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 24/166 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G YFL+H HSDH GL+S W GP++CS++TA L + +D + LD
Sbjct: 593 QGCNAYFLSHFHSDHYIGLTSTWCHGPIYCSKVTANLVKQQL-RVDPKYVVALDFEDRFE 651
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
I V + I ANHCPG S + LF G +L+ GDFR
Sbjct: 652 IPGTQ-------GVAITMIPANHCPG----SSLFLFEKVIGKGANPKTQRILHCGDFRAC 700
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSRE 166
++ + +V ++ K +D+ YLD TY N Y+FPS+E
Sbjct: 701 PAHLAHPLLMPDVVDSITGKTKQQKIDVCYLDTTYLNPKYSFPSQE 746
>gi|83770372|dbj|BAE60505.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391866780|gb|EIT76048.1| putative hydrolase involved in interstrand cross-link repair
[Aspergillus oryzae 3.042]
Length = 773
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 25/165 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+++W GP++CS+ T L + L + V+D+ +
Sbjct: 444 EGCNAYFLSHYHSDHYIGLTASWRHGPIYCSKATGNLVRQQ---LKVDPRWVVDLEFEKT 500
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
V P++G V+V I+ANHCPG S + LF G +L+ GDFR
Sbjct: 501 TEV--PNTG----VQVTLIEANHCPG----SAIFLFEKAMGSGQSKRIQRVLHCGDFRAS 550
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
++ + + R +V ++ + +D+ YLD TY + Y+FPS+
Sbjct: 551 PTHVQHALLRPEIVDSVTGQKRQQRIDVCYLDTTYLSPKYSFPSQ 595
>gi|414589580|tpg|DAA40151.1| TPA: hypothetical protein ZEAMMB73_008326 [Zea mays]
Length = 1174
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 134/307 (43%), Gaps = 60/307 (19%)
Query: 29 QGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEV 88
QGL+ ++ G ++CS +TA L K G+ + VL + +I+ V+ +
Sbjct: 877 QGLTRSFCHGKIYCSSITASLVHHKI-GIPWDRLHVLTLNEKLNIAGVN----------L 925
Query: 89 IAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTLVKALKDDVVD 147
I DANHCPG S+++LF G +L+TGDFR+ + ++ N + L+ V
Sbjct: 926 ICFDANHCPG----SIIILFEPPNGKAVLHTGDFRFSS-----KMANNPV---LQSSCVH 973
Query: 148 ILYLDNTYCNSSYAFPSREVAAQ----QIWVWPERLQTMHLLGFHDIFTTKTSLTRVRAV 203
L LD TYCN Y FPS+E+ Q I +T+ L+G + I + + R +
Sbjct: 974 TLILDTTYCNPRYDFPSQEIVIQFVIEAIQAEAFNPKTLFLIGSYTIGKERLFMEVARLL 1033
Query: 204 PRYSF----SIDTLESL------------NTMHPTIGIMPSGLPWVVKPLKGGGSLPGSL 247
+ + + L+ L N I ++P W + K L
Sbjct: 1034 QKKVYVGAAKLQILKHLELPQEIMHWFTANEAESHIHVVPM---WTLASFKRMKYLSNQY 1090
Query: 248 FSSYQ-------SKWR-ATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLN 299
Y + W G +T + GS+ R Y VPYS+HS FTE+++F+
Sbjct: 1091 AGRYDLIVAFCPTGWAFGKGRKKTPGKRWQQGSIIR-----YEVPYSEHSSFTELQQFVK 1145
Query: 300 LVQPSNI 306
+ P +I
Sbjct: 1146 FISPEHI 1152
>gi|158966682|ref|NP_001103684.1| protein artemis isoform 3 [Mus musculus]
gi|80474682|gb|AAI08936.1| Dclre1c protein [Mus musculus]
Length = 486
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 157/376 (41%), Gaps = 68/376 (18%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVFLYCSPV 64
Query: 46 TAKLFPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P + I ++I + IS+V +SGEK V V + A HCPG S
Sbjct: 65 TKELL-LTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
VM LF+G G +LYTGDFR + E R L+ + +KD + +YLD T+C+
Sbjct: 120 VMFLFQGSNGTVLYTGDFRL----AKGEASRMELLHSGGRVKD--IQSVYLDTTFCDPRF 173
Query: 160 YAFPSREVAAQQIW----VWPER-------LQTMHLLGFHDIFTTKTS----LTRVRAVP 204
Y PSRE + I W R L G+ +FT + V +
Sbjct: 174 YQIPSREQCLRGILELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDKLD 233
Query: 205 RYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG----- 259
+ D L L T T I P + + LP + S ++
Sbjct: 234 MFKNMPDILHHLTTDRNT-QIHACRHPKAEECFQ-WNKLPCGITSQNKTALHTISIKPST 291
Query: 260 ---GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCY 316
G +T K + R + Y +S HS F+EI++FL+ + P N+ V
Sbjct: 292 MWFGERTRK----TNVIVRTGESSYRACFSFHSSFSEIKDFLSYICPVNVYPNVIPVGLT 347
Query: 317 VDPLY-YFGRLCRANQ 331
VD + LCR+ Q
Sbjct: 348 VDKVMDVLKPLCRSPQ 363
>gi|145495220|ref|XP_001433603.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400722|emb|CAK66206.1| unnamed protein product [Paramecium tetraurelia]
Length = 441
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 38/295 (12%)
Query: 31 LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKT----FV 86
+S W G ++CS++T + KFP ++ I L+ + ++V+S +K +
Sbjct: 1 MSPLWNYGKIYCSKITKQFILNKFPKIER--IVALEFNHIYYLNVLSQELTDKLDDEFTI 58
Query: 87 EVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDV- 145
EV+ ANH PG S M LFRG G +L+TGDFR+ R+ I N ++ + +
Sbjct: 59 EVVLFSANHIPG----SSMFLFRGYMGTILHTGDFRFN----RSMITDNPILFPNNEAIQ 110
Query: 146 VDILYLDNTYCNSSYAFPSREVAAQQIWVWPER------LQTMHLLGFHDIFTTKTSLTR 199
+D L DNTYC+ + FP+ ++ AQQ+ E L M LG I
Sbjct: 111 IDELIFDNTYCDPMFNFPTADIVAQQMINIIENNIKKRVLIAMGALGKEAI--------- 161
Query: 200 VRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGG---GSLPGSLFSSY-QSKW 255
V + +Y F + + + I + KG S + Y +S
Sbjct: 162 VMEICKY-FKTKIIVNQEKYNQLIASSTKNIDLFTTDKKGNWYYRSHREQILQQYIESGQ 220
Query: 256 RATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
+ T+ L ++ D + Y VPYS HS + E+ F+N ++P+ ++ +V
Sbjct: 221 QNFICINTDFLMQSHRDPDGIN---YMVPYSLHSNYLEMRTFVNSIKPAILKKLV 272
>gi|426240813|ref|XP_004014288.1| PREDICTED: protein artemis [Ovis aries]
Length = 710
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 163/387 (42%), Gaps = 90/387 (23%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVCLYCSPV 64
Query: 46 TAKLFPLKFPGLDLSLIRV--LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P R+ ++I + IS+V +SGEK + V + A HCPG S
Sbjct: 65 TKELL-LTSPKYRFWEKRIVSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
VM LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+
Sbjct: 120 VMFLFQGNNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IQSVYLDTTFCDPKY 173
Query: 160 YAFPSREVAAQQI------W--------VWPERLQTMHLLGFHDIFTTKTS----LTRVR 201
Y PSRE + I W VW L G+ +FT + V
Sbjct: 174 YQIPSREECLRGIMELVRNWISRSPYHVVW---LNCKAAYGYEYLFTNLSEEFGLQVHVN 230
Query: 202 AVPRYSFSIDTLESLNT---------MHPTI------GIMPSGLPWVVK-PLKGGGSLPG 245
+ + D L L T HP +P G+ K PL P
Sbjct: 231 KLDMFRNMPDILHHLTTDRDTQIHACRHPKAEEYFQWNKLPCGITSKNKIPLHTISIKPS 290
Query: 246 SLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSN 305
+++ G +T K + R + Y +S HS ++EI++FL+ + P N
Sbjct: 291 TMWF----------GERTRK----TNIIVRTGESSYRACFSFHSSYSEIKDFLSYICPVN 336
Query: 306 IRGIVSSSSCYVDPLYYFGR-LCRANQ 331
+ V +D + + LCR++Q
Sbjct: 337 VYPNVIPLGTTMDKVKEILKPLCRSSQ 363
>gi|28316788|ref|NP_783614.1| protein artemis isoform 2 [Mus musculus]
gi|26331966|dbj|BAC29713.1| unnamed protein product [Mus musculus]
gi|26342607|dbj|BAC34960.1| unnamed protein product [Mus musculus]
Length = 603
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 158/379 (41%), Gaps = 74/379 (19%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVFLYCSPV 64
Query: 46 TAKLFPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P + I ++I + IS+V +SGEK V V + A HCPG S
Sbjct: 65 TKELL-LTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
VM LF+G G +LYTGDFR + E R L+ + +KD + +YLD T+C+
Sbjct: 120 VMFLFQGSNGTVLYTGDFRL----AKGEASRMELLHSGGRVKD--IQSVYLDTTFCDPRF 173
Query: 160 YAFPSREVAAQQI------W--------VWPERLQTMHLLGFHDIFTTKTS----LTRVR 201
Y PSRE + I W VW L G+ +FT + V
Sbjct: 174 YQIPSREQCLRGILELVRSWVTRSPHHVVW---LNCKAAYGYEYLFTNLSEELGVQVHVD 230
Query: 202 AVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG-- 259
+ + D L L T T I P + + LP + S ++
Sbjct: 231 KLDMFKNMPDILHHLTTDRNT-QIHACRHPKAEECFQ-WNKLPCGITSQNKTALHTISIK 288
Query: 260 ------GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSS 313
G +T K + R + Y +S HS F+EI++FL+ + P N+ V
Sbjct: 289 PSTMWFGERTRK----TNVIVRTGESSYRACFSFHSSFSEIKDFLSYICPVNVYPNVIPV 344
Query: 314 SCYVDPLY-YFGRLCRANQ 331
VD + LCR+ Q
Sbjct: 345 GLTVDKVMDVLKPLCRSPQ 363
>gi|197102870|ref|NP_001126451.1| protein artemis [Pongo abelii]
gi|71153327|sp|Q5R6Z9.1|DCR1C_PONAB RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein
gi|55731499|emb|CAH92461.1| hypothetical protein [Pongo abelii]
Length = 692
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEAARMELLHSGGRIKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|311705717|gb|ADQ01124.1| artemis [Pongo pygmaeus]
Length = 692
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEAARMELLHSGGRIKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|71654845|ref|XP_816034.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881135|gb|EAN94183.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 715
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 35/185 (18%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
++FL+H HSDH G++ W+ G ++ SR TA + + G+ S ++ +D ++ S+
Sbjct: 82 LFFLSHFHSDHYNGVTEGWSHGTIYASRGTANILCWRL-GIPESRVKRMDFCVTYTFSLK 140
Query: 77 SPSSGEKT------------FVEVIAIDANHCPGILGCSVMLLFRGD-FGCLLYTGDFRW 123
+ + +T F V I A HCPG SVM LFR FG +L+TGDFR+
Sbjct: 141 NGALLYETTWDEEEWRCSDEFFSVTLIPAGHCPG----SVMFLFRSPVFGTVLHTGDFRF 196
Query: 124 --EASN--------------ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
E N + ++ N ++K++ VD+L+LDNT+C+ + FPSR
Sbjct: 197 THEQPNSFLLPHVPRMPHFQKEIDMMTNPVLKSVAGK-VDVLFLDNTFCDERFNFPSRAD 255
Query: 168 AAQQI 172
+ +++
Sbjct: 256 SLREV 260
>gi|301611547|ref|XP_002935298.1| PREDICTED: protein artemis-like [Xenopus (Silurana) tropicalis]
Length = 697
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 97/182 (53%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARG--------PLFCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + + L+CS +T +L
Sbjct: 10 EYPAISIDRFDRENLSARAYFLSHCHKDHMKGLRAPFLKRRLQNSLKVHLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V ++G K V V + A HCPG SVM LF
Sbjct: 70 -LTNPKYAFWENRMISIEIDTPTQISLVDEATGYKEDVVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E+ R L+ + +KD ++ +YLD T+C+ Y PS
Sbjct: 125 QGNSGTVLYTGDFRL----AKGEVARMELLHSGNRVKD--IESVYLDTTFCDPKYYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|311705701|gb|ADQ01116.1| artemis [Symphalangus syndactylus]
Length = 692
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWKKRIIPIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|311705703|gb|ADQ01117.1| artemis [Gorilla gorilla]
Length = 692
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|255930809|ref|XP_002556961.1| Pc12g00580 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581580|emb|CAP79685.1| Pc12g00580 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 845
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 84/166 (50%), Gaps = 24/166 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFL+H HSDH GL+ +W GP++CSR TA L + L + ++D+ + S
Sbjct: 434 EGCKAYFLSHFHSDHYIGLNKSWCHGPIYCSRPTANLVRQQ---LRVDPKWIIDV-DFES 489
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ V + G V V + ANHCPG S + LF G +L+ GDFR
Sbjct: 490 TTEVPETGG----VRVTMLHANHCPG----SSLFLFEKSSGAGPNAYNQRVLHCGDFRAS 541
Query: 125 ASNERAEIGR----NTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
++ + + R N + + + +D YLD TY + Y FP++E
Sbjct: 542 PAHVQHRLLRPNVTNPVTEKPRQQHIDKCYLDTTYLSPKYGFPAQE 587
>gi|384251897|gb|EIE25374.1| DRMBL-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 363
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 151/360 (41%), Gaps = 119/360 (33%)
Query: 8 VDRWTEGSQ-----VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFP--LKFPGLDLS 60
VDR+ +G++ +FLTH HSDH +GL+S + G ++C+ +TAKL LK P
Sbjct: 39 VDRFGKGTEKAACKSWFLTHFHSDHYKGLTSKFKAGVIYCTLITAKLVHQRLKVP----- 93
Query: 61 LIRVLDIGSWHSISVVSPSSGEKT-FVEVIAIDANHCPGILGCSVMLLFRGD-FGCLLYT 118
W + VV ++ + V V +DANHCPG + M++F +++T
Sbjct: 94 ---------WERLRVVQLNAAQLVEGVRVTFVDANHCPG----AAMIVFEPPGRAPIVHT 140
Query: 119 GDFRWEA--SNERAEI---GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR-------- 165
GD R+ ERA + GR TL+ LD TYC + Y FP +
Sbjct: 141 GDCRYHVGMQQERALVAVRGRATLI------------LDTTYCAAQYNFPPQLQVLQFVL 188
Query: 166 ----------------------------EVA---AQQIWVWPERLQTMHLLGF---HDIF 191
EVA ++++V + + LG ++
Sbjct: 189 EAVRAEAFNPATLFLFGSYTIGKERLFLEVARILQRKVYVSVSKRAVLDTLGLPPEYETL 248
Query: 192 TTKTSLTRVRAVPRYSFSID----TLESLNTMHPTI-GIMPSGLPWVVKPLKGGGSLPGS 246
T R+ AVP + S+ TL+ + TI G P+G
Sbjct: 249 LTTDDRARLHAVPLWRVSLKHMARTLKHYRGRYTTIVGFQPTG----------------- 291
Query: 247 LFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
+S + K RA G + +K G++ +YSVPYS+HS E+ + ++ ++P+ I
Sbjct: 292 -WSMHSGKGRAPRGRRRQK-----GTL-----IVYSVPYSEHSSHQELRQMVDFLRPTKI 340
>gi|71896183|ref|NP_001026765.1| protein artemis [Gallus gallus]
gi|71153324|sp|Q5QJC2.1|DCR1C_CHICK RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein; AltName: Full=SNM1 homolog C; Short=chSNM1C;
AltName: Full=SNM1-like protein
gi|47835016|gb|AAR27406.1| artemis [Gallus gallus]
Length = 714
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 96/178 (53%), Gaps = 28/178 (15%)
Query: 6 ISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARG--------PLFCSRLTAKLF--PL 52
+S+DR+ ++ YFL+H H DH +GL + R L+CS +T +L
Sbjct: 14 LSIDRFDYDNLRARAYFLSHCHKDHMKGLRAPALRRRLQSSLKVKLYCSPVTKELLLTNS 73
Query: 53 KFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
K+ + ++ L++ + IS+V ++GEK +EV + A HCPG SVM LF+G+
Sbjct: 74 KYAFWENHIV-ALEVETPTQISLVDETTGEKEDIEVTLLPAGHCPG----SVMFLFQGEN 128
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLV---KALKDDVVDILYLDNTYCNSS-YAFPSRE 166
G +LYTGDFR + E R L+ ++KD + +YLD T+C+ Y PSRE
Sbjct: 129 GTVLYTGDFRL----AKGEAARMELLHSGTSVKD--IQSVYLDTTFCDPRFYHIPSRE 180
>gi|311705697|gb|ADQ01114.1| artemis [Hylobates agilis]
Length = 692
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWKKRIIPIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|410963228|ref|XP_003988167.1| PREDICTED: protein artemis isoform 1 [Felis catus]
Length = 690
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVCLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTNPRYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPKFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|340520526|gb|EGR50762.1| hypothetical protein TRIREDRAFT_3027 [Trichoderma reesei QM6a]
Length = 818
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 83/165 (50%), Gaps = 24/165 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG Q YFL+H HSDH GL++ W GP++CS++T L + L + V+++ S
Sbjct: 370 EGCQAYFLSHFHSDHYIGLTANWRHGPIYCSKVTGSLVKQQ---LRTAAKWVVELEFEKS 426
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
V P + T V + ANHCPG S + LF FG +L+ GDFR
Sbjct: 427 YDV--PGTDGAT---VTMMPANHCPG----SSLFLFEKPFGTGPNKRVKRILHCGDFRAC 477
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
+ R + + +V ++ K +DI YLD TY N Y+FP +
Sbjct: 478 PQHVRHPLLKADVVDSISGKTKQQRIDICYLDTTYLNPRYSFPPQ 522
>gi|148675985|gb|EDL07932.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_e [Mus musculus]
Length = 617
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 158/379 (41%), Gaps = 74/379 (19%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 24 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVFLYCSPV 78
Query: 46 TAKLFPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P + I ++I + IS+V +SGEK V V + A HCPG S
Sbjct: 79 TKELL-LTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPG----S 133
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
VM LF+G G +LYTGDFR + E R L+ + +KD + +YLD T+C+
Sbjct: 134 VMFLFQGSNGTVLYTGDFRL----AKGEASRMELLHSGGRVKD--IQSVYLDTTFCDPRF 187
Query: 160 YAFPSREVAAQQI------W--------VWPERLQTMHLLGFHDIFTTKTS----LTRVR 201
Y PSRE + I W VW L G+ +FT + V
Sbjct: 188 YQIPSREQCLRGILELVRSWVTRSPHHVVW---LNCKAAYGYEYLFTNLSEELGVQVHVD 244
Query: 202 AVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG-- 259
+ + D L L T T I P + + LP + S ++
Sbjct: 245 KLDMFKNMPDILHHLTTDRNT-QIHACRHPKAEECFQ-WNKLPCGITSQNKTALHTISIK 302
Query: 260 ------GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSS 313
G +T K + R + Y +S HS F+EI++FL+ + P N+ V
Sbjct: 303 PSTMWFGERTRK----TNVIVRTGESSYRACFSFHSSFSEIKDFLSYICPVNVYPNVIPV 358
Query: 314 SCYVDPLY-YFGRLCRANQ 331
VD + LCR+ Q
Sbjct: 359 GLTVDKVMDVLKPLCRSPQ 377
>gi|315046636|ref|XP_003172693.1| hypothetical protein MGYG_09076 [Arthroderma gypseum CBS 118893]
gi|311343079|gb|EFR02282.1| hypothetical protein MGYG_09076 [Arthroderma gypseum CBS 118893]
Length = 848
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+S+W+ GP++CS +TA L + + ++ L+
Sbjct: 432 EGCSAYFLSHYHSDHYGGLTSSWSHGPIYCSSVTANLVKQQI-NVKADMVVELEFEQKTE 490
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
I +S V I ANHCPG S + LF G +L+ GDFR
Sbjct: 491 IPGTDGAS-------VTMITANHCPG----SSLFLFEKPNGKGNNARVHRILHCGDFRAS 539
Query: 125 ASNERAEIGR----NTLVKALKDDVVDILYLDNTYCNSSYAFP 163
+S+ + R + L L +D+ YLD TY N YAFP
Sbjct: 540 SSHINHPLLRPNIMDPLTGQLTQQKIDVCYLDTTYLNPKYAFP 582
>gi|119606658|gb|EAW86252.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_c [Homo sapiens]
Length = 692
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWKKRIISIEIEAPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|311705695|gb|ADQ01113.1| artemis [Nomascus leucogenys]
Length = 692
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWKKRIIPIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|114629490|ref|XP_001147049.1| PREDICTED: protein artemis isoform 8 [Pan troglodytes]
Length = 692
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|76496497|ref|NP_001029027.1| protein artemis isoform a [Homo sapiens]
gi|71153325|sp|Q96SD1.2|DCR1C_HUMAN RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein; AltName: Full=Protein A-SCID; AltName:
Full=SNM1 homolog C; Short=hSNM1C; AltName:
Full=SNM1-like protein
Length = 692
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|13872809|emb|CAC37570.1| artemis protein [Homo sapiens]
Length = 692
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|355682952|gb|AER97013.1| DNA cross-link repair 1C [Mustela putorius furo]
Length = 691
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 94/187 (50%), Gaps = 38/187 (20%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGL-----RAPTLKRRLECSLKVCLYCSPV 64
Query: 46 TAKLFPLKFPGLDLSLIRV--LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P R+ ++I + I +V +SGEK V V + A HCPG S
Sbjct: 65 TKELL-LTNPKYRFWEKRIVSIEIETPTQIPLVDEASGEKEEVVVTLLPAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
VM LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+
Sbjct: 120 VMFLFQGNNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IQSVYLDTTFCDPKF 173
Query: 160 YAFPSRE 166
Y PSRE
Sbjct: 174 YQIPSRE 180
>gi|357130735|ref|XP_003567002.1| PREDICTED: uncharacterized protein LOC100835014 [Brachypodium
distachyon]
Length = 1365
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 29/163 (17%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFP--LKFPGLDLSLIRVLDIGSWHS 72
S YFL+H HSDH GL +W RG +FCS TA+L L P LI +DIG+ +
Sbjct: 72 SVAYFLSHFHSDHYAGLGPSWRRGLVFCSAPTARLLASVLSVPS---ELIVSIDIGARIT 128
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG---DFGCLLYTGDFRWEASNER 129
+ V+A+DANHCPG +V LF + ++TGDFR+ S R
Sbjct: 129 VDGWG----------VVAVDANHCPG----AVQFLFTSPGPNTKRYVHTGDFRYTDSM-R 173
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
++ V A D ++LD TYCN + FPS+E + + +
Sbjct: 174 SDPNLLEFVGA------DAVFLDTTYCNPKFTFPSQEESVEYV 210
>gi|302498636|ref|XP_003011315.1| DNA repair protein Pso2/Snm1, putative [Arthroderma benhamiae CBS
112371]
gi|291174865|gb|EFE30675.1| DNA repair protein Pso2/Snm1, putative [Arthroderma benhamiae CBS
112371]
Length = 848
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 79/168 (47%), Gaps = 34/168 (20%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKF---PGL--DLSLIRVLDI 67
EG YFL+H HSDH GL+S+W+ GP++CS +TA L + P L +L R +I
Sbjct: 432 EGCNAYFLSHYHSDHYGGLTSSWSHGPIYCSTVTANLVKQQIKVKPDLVVELEFERKTEI 491
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTG 119
+SV I ANHCPG S + LF G +L+ G
Sbjct: 492 PGTDGVSVT-------------MITANHCPG----SSLFLFEKAIGKGKNARIHRILHCG 534
Query: 120 DFRWEASNERAEIGRNTL----VKALKDDVVDILYLDNTYCNSSYAFP 163
DFR +++ + R + L + +D+ YLD TY N YAFP
Sbjct: 535 DFRASSAHINHPLLRPNIQDRHTGKLTEQKIDVCYLDTTYLNPKYAFP 582
>gi|320591532|gb|EFX03971.1| DNA repair protein pso2 [Grosmannia clavigera kw1407]
Length = 883
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 85/160 (53%), Gaps = 21/160 (13%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFL+H HSDH GL++ W+ GP++CS++T+ L + L + V+ I +
Sbjct: 404 EGCRAYFLSHFHSDHYVGLTAKWSHGPIYCSKVTSSLVKTQ---LGTAAKWVVAIEYEQT 460
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF-----RGDFGCLLYTGDFRWEASN 127
+ V P +G V+V I ANHCPG S + LF G +L+ GDFR ++
Sbjct: 461 VDV--PGTGG---VQVTMIPANHCPG----SSLFLFTKTLPNGRTQRILHCGDFRACPAH 511
Query: 128 ERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFP 163
+ + R + A+ + +D+ YLD TY N Y+FP
Sbjct: 512 VQHSLLRPETLDAVTGKTRQQKIDVCYLDTTYLNPRYSFP 551
>gi|396472511|ref|XP_003839135.1| hypothetical protein LEMA_P028080.1 [Leptosphaeria maculans JN3]
gi|312215704|emb|CBX95656.1| hypothetical protein LEMA_P028080.1 [Leptosphaeria maculans JN3]
Length = 965
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 90/182 (49%), Gaps = 28/182 (15%)
Query: 5 LISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
I+VD + +G YFL+H HSDH GL+S+WA GP++CS++T L + +D
Sbjct: 468 FIAVDAFRYGAVKGQNAYFLSHFHSDHYIGLTSSWAHGPIYCSKVTGNLVRQQL-RVDPK 526
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------ 114
+ LD + + V + G V V I ANHCPG S + LF + G
Sbjct: 527 WVVDLD---FEKKTEVPGTQG----VHVTMISANHCPG----SSLFLFEKETGQGKMMKL 575
Query: 115 --LLYTGDFRWEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSREVA 168
+L+ GDFR ++ + R ++ A+ + +D YLD TY N YAFP ++
Sbjct: 576 QRVLHCGDFRACQAHIEHPLLRPDVLDAVSGKNRKQKLDACYLDTTYLNPKYAFPPQQQV 635
Query: 169 AQ 170
Q
Sbjct: 636 IQ 637
>gi|425767838|gb|EKV06391.1| DNA repair protein Pso2/Snm1, putative [Penicillium digitatum
PHI26]
gi|425783769|gb|EKV21590.1| DNA repair protein Pso2/Snm1, putative [Penicillium digitatum Pd1]
Length = 844
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 83/166 (50%), Gaps = 24/166 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GLS +W GP++CSR TA L + L + V+D+ + S
Sbjct: 433 EGCNAYFLSHFHSDHYIGLSKSWCHGPIYCSRPTANLVRQQ---LRVDPKWVVDL-EFES 488
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ V + G V V I ANHCPG S + LF +G +L+ GDFR
Sbjct: 489 TTEVPETGG----VRVTMIHANHCPG----SSLFLFEKSYGNSPNASKQRVLHCGDFRAS 540
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSRE 166
+ + + R ++ + + +D YLD TY + Y FP++E
Sbjct: 541 PAQVQHPLLRPDVIIPVTGKPRQQHIDKCYLDTTYLSPKYGFPAQE 586
>gi|432100277|gb|ELK29045.1| Protein artemis [Myotis davidii]
Length = 691
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 92/182 (50%), Gaps = 38/182 (20%)
Query: 6 ISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRLTAKL 49
IS+DR+ ++ YFL+H H DH +GL R P L+CS +T +L
Sbjct: 14 ISIDRFDRENLRARAYFLSHCHKDHMKGL-----RAPALKRRLECSLKVYLYCSPVTKEL 68
Query: 50 FPLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLL 107
L P R++ +I + IS+V +SGEK + V + A HCPG SVM L
Sbjct: 69 L-LTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFL 123
Query: 108 FRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFP 163
F+GD G +LYTGDFR + E R L+ +KD + +YLD T+C+ Y P
Sbjct: 124 FQGDNGTVLYTGDFRL----AKGEAARMELLHCGGRVKD--IQSVYLDTTFCDPKFYQIP 177
Query: 164 SR 165
SR
Sbjct: 178 SR 179
>gi|384487503|gb|EIE79683.1| hypothetical protein RO3G_04388 [Rhizopus delemar RA 99-880]
Length = 410
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 84/160 (52%), Gaps = 26/160 (16%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF--PLKFPGLDLSLIRVLDIGSWHSISV 75
YFL+H H DH L++ W GP++CS +T++L L+ P + IR L + S
Sbjct: 31 YFLSHFHGDHYTNLNAGWTHGPIYCSEITSRLVQKKLRVPS---NFIRPLPLNR----SC 83
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF---RGDFGCL--LYTGDFRWEASNERA 130
+ P + V V IDANHCPG +VM L + D L L+TGDFR
Sbjct: 84 LIPGTDN---VSVTLIDANHCPG----AVMFLCVVPQTDSPPLRYLHTGDFR-----ACK 131
Query: 131 EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
E+ + L+K ++ +DILYLD TY + Y+FPS+ Q
Sbjct: 132 EMCLHPLLKQPENPPIDILYLDTTYLDHKYSFPSQTTCIQ 171
>gi|311705709|gb|ADQ01120.1| artemis [Colobus guereza]
Length = 689
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRV--LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R+ ++I + I +V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWEKRIVSIEIETPTQIPLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E+ R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEVARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|357126195|ref|XP_003564774.1| PREDICTED: uncharacterized protein LOC100821385 [Brachypodium
distachyon]
Length = 622
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 151/360 (41%), Gaps = 55/360 (15%)
Query: 1 MEKGL-ISVDRWTEGSQVY---FLTHLHSDH--TQGLSSAWARGPLFCSRLTAKLFPLKF 54
M GL +VD W S+ FLTH H DH G G ++ +RLT L F
Sbjct: 5 MPPGLPFAVDTWGPSSRRRRHRFLTHAHRDHLVGAGTDPGGGGGTVYSTRLTMSLALRHF 64
Query: 55 PGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC 114
P L+ +++G ++ V P+ V A DANHCPG +VM LF G+FG
Sbjct: 65 PRLEQGEFVEIEVGK--TLLVDDPAGA----FSVTAYDANHCPG----AVMFLFEGEFGS 114
Query: 115 LLYTGDFRWEASNER-------AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
+L+TGD R + A+ GR + + +D ++LD T+ PS+E
Sbjct: 115 ILHTGDCRLTPDCVQNLPHKYIAKKGRENICR------LDFVFLDCTFSKCFLKLPSKES 168
Query: 168 AAQQ----IWVWPER---LQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLN-TM 219
A QQ IW P LLG I + + ++ D L++L+ T
Sbjct: 169 AIQQVIACIWKHPHAPFVYLACDLLGHEAILVEVSRTFGSKIYVDIRWNSDCLKALSLTA 228
Query: 220 HPTIGIMPSGLPWVV----------KPLKGGGS--LPGSLFSSYQSKWRATGGTQTEKLK 267
I PS +V K L+G + P LF ++W A Q L
Sbjct: 229 LEIITDDPSCRFQIVGFHQLYDSASKKLEGARANLQPEPLFIRPSTQWYACARNQKPSLT 288
Query: 268 EALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
EA D F I+ + +S HS E+E+ L L+QP I ++ C+ L Y + C
Sbjct: 289 EA--EQDDFG--IWHICFSIHSSRDELEQALQLLQPQ--WAISTTPPCFAMELSYVKKRC 342
>gi|452821244|gb|EME28277.1| DNA ligase [Galdieria sulphuraria]
Length = 340
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 32/185 (17%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H DH +GL S + +G ++CS +TA+L L I ++D W +V+
Sbjct: 34 FFLTHWHYDHYRGLGSNFQQGFIYCSPITARL---------LERITLVD-PQW----IVA 79
Query: 78 PSSGEKTFVEVIAI---DANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAEIG 133
+ E V+ + I DANHCPG SVM+LF+ G L+TGD R+ ++ I
Sbjct: 80 KHNNEPFLVDKVQIRFLDANHCPG----SVMILFQTSEGSNYLHTGDMRFTQDLKKELIV 135
Query: 134 RNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIFTT 193
N + +D +YLD TYC+ Y FPS+ Q+I ++Q M+ + F D +
Sbjct: 136 LNNI-------CLDAVYLDTTYCHRKYRFPSQAQTIQRI---VHKIQNMNRIPFQDSNSN 185
Query: 194 KTSLT 198
+ T
Sbjct: 186 RIDCT 190
>gi|296805702|ref|XP_002843675.1| DNA cross-link repair protein pso2/snm1 [Arthroderma otae CBS
113480]
gi|238844977|gb|EEQ34639.1| DNA cross-link repair protein pso2/snm1 [Arthroderma otae CBS
113480]
Length = 853
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 87/178 (48%), Gaps = 36/178 (20%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD + EG YFL+H HSDH GL+S+W+ GP++CS++TA L + + +S
Sbjct: 428 ITVDAFKYGAIEGCSAYFLSHYHSDHYGGLTSSWSHGPIYCSKITANLVKQQ---IKVSP 484
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------- 114
V ++ + + + + G V V I ANHCPG S + LF G
Sbjct: 485 DMVFEL-EFEKRTEIPGTDG----VSVTMITANHCPG----SSLFLFEKSIGNGKAARVH 535
Query: 115 -LLYTGDFRWEASNERAEIGRNTLVKALKD--------DVVDILYLDNTYCNSSYAFP 163
+L+ GDFR + A I L +KD +D+ YLD TY N YAFP
Sbjct: 536 RILHCGDFRACS----AHINHPLLRPDIKDPHTGQLTQQKIDVCYLDTTYLNPKYAFP 589
>gi|358378071|gb|EHK15754.1| hypothetical protein TRIVIDRAFT_56212 [Trichoderma virens Gv29-8]
Length = 800
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 80/170 (47%), Gaps = 34/170 (20%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG-----LDLSLIRVLDI 67
EG Q YFL+H HSDH GL++ W GP++CS++T L + ++L + DI
Sbjct: 354 EGCQAYFLSHFHSDHYIGLTANWRHGPIYCSKVTGSLVKQQLRTAAKWVVELEFEKPYDI 413
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTG 119
SV + ANHCPG S + LF+ FG +L+ G
Sbjct: 414 PGTDGASVT-------------MMPANHCPG----SSLFLFQKSFGSGPNKRTKRILHCG 456
Query: 120 DFRWEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
DFR + R + R ++ ++ + +DI YLD TY N Y+FP +
Sbjct: 457 DFRACPEHVRHPLLRPDVIDSISGKSRQQRIDICYLDTTYLNPRYSFPPQ 506
>gi|407918638|gb|EKG11907.1| DNA repair metallo-beta-lactamase [Macrophomina phaseolina MS6]
Length = 852
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 24/165 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G + YFL+H HSDH GL++ W G ++CSR+TA L + L + ++D+ W
Sbjct: 426 QGCEAYFLSHFHSDHYIGLTANWHHGLIYCSRVTANLVRQQ---LRVDPKWIVDL-EWEK 481
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ + + G V+V I ANHCPG S + LF G +L+ GDFR
Sbjct: 482 ETEIPGTGG----VKVTMIPANHCPG----SSLFLFEKPIGGGKQPKMQRVLHCGDFRAC 533
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
++ + R LV + + +D+ YLD TY N YAFPS+
Sbjct: 534 RAHIEHPLLRPDLVDTISGKSRQQKIDVCYLDTTYLNPKYAFPSQ 578
>gi|301789021|ref|XP_002929927.1| PREDICTED: protein artemis-like [Ailuropoda melanoleuca]
gi|281339274|gb|EFB14858.1| hypothetical protein PANDA_020236 [Ailuropoda melanoleuca]
Length = 692
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 94/182 (51%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVCLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + I +V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWEKRIISIEIETPTQIPLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IQSVYLDTTFCDPKFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|327305525|ref|XP_003237454.1| DNA repair protein Pso2/Snm1 [Trichophyton rubrum CBS 118892]
gi|326460452|gb|EGD85905.1| DNA repair protein Pso2/Snm1 [Trichophyton rubrum CBS 118892]
Length = 849
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 84/179 (46%), Gaps = 38/179 (21%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKF---PGL- 57
I+VD + EG YFL+H HSDH GL+S+W+ GP++CS +TA L + P +
Sbjct: 422 ITVDAFRYGAIEGCNAYFLSHYHSDHYGGLTSSWSHGPIYCSTVTANLVKQQIKVKPDMV 481
Query: 58 -DLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-- 114
+L R +I +SV I ANHCPG S + LF G
Sbjct: 482 VELEFERKTEIPGTDGVSVT-------------MITANHCPG----SSLFLFEKPIGKGK 524
Query: 115 ------LLYTGDFRWEASNERAEIGRNTL----VKALKDDVVDILYLDNTYCNSSYAFP 163
+L+ GDFR +++ + R + L + +D+ YLD TY N YAFP
Sbjct: 525 NARIHRILHCGDFRASSAHINHPLLRPNIQDRHTGKLTEQKIDVCYLDTTYLNPKYAFP 583
>gi|451849701|gb|EMD63004.1| hypothetical protein COCSADRAFT_37879 [Cochliobolus sativus ND90Pr]
Length = 857
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 28/182 (15%)
Query: 5 LISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
I+VD + +G YFL+H HSDH GLS++W GP++CS++T L + +D
Sbjct: 428 FIAVDAFRYGAVKGQNAYFLSHFHSDHYVGLSASWKHGPIYCSKVTGNLVRQQL-RVDPK 486
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------ 114
+ LD + P +G V V I ANHCPG S + LF + G
Sbjct: 487 WVVDLDF----EVKTEVPGAG---GVFVTMISANHCPG----SSLFLFEKEVGKGNNQKL 535
Query: 115 --LLYTGDFRWEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSREVA 168
+L+ GDFR ++ + R ++ A+ + +D YLD TY N YAFP ++
Sbjct: 536 QRVLHCGDFRACQAHVEHPLLRPDVLDAVSGKSRQQKLDACYLDTTYLNPKYAFPPQQQV 595
Query: 169 AQ 170
Q
Sbjct: 596 IQ 597
>gi|443899503|dbj|GAC76834.1| predicted hydrolase involved in interstrand cross-link repair
[Pseudozyma antarctica T-34]
Length = 863
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 81/173 (46%), Gaps = 39/173 (22%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFLTH HSDH G++S W G ++CS TA L G+D +R L +
Sbjct: 275 EGCRGYFLTHFHSDHYGGMTSNWNHGLIYCSVTTANLCRTHL-GVDPQWLRPLPM----E 329
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------------------ 114
++V P SG V+V I+ANHCPG S + LF G
Sbjct: 330 VAVPIPDSG---GVQVTCIEANHCPG----SCLFLFEGPQTAQLLSRSHASPHIGTRRIF 382
Query: 115 -LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
L+ GDFR +T ++ +DI+YLD TYCN Y FP+++
Sbjct: 383 RYLHCGDFRASPV--------HTSHPSIAGKKLDIIYLDTTYCNPRYCFPAQD 427
>gi|359488141|ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
Length = 1449
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 86/172 (50%), Gaps = 31/172 (18%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW--HS 72
S YFL+H HSDH GLS W+ G +FCS TA+L L+ VL + S +
Sbjct: 112 SVTYFLSHFHSDHYSGLSPKWSNGIIFCSNTTARL-----------LVEVLGVSSLFVYP 160
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-----GDFGCLLYTGDFRWEASN 127
++V P + EV +DANHCPG +V LF+ G F ++TGDFR+ +
Sbjct: 161 LAVSQPVLIDG--CEVALLDANHCPG----AVQFLFKVPGVDGRFERYVHTGDFRF-CES 213
Query: 128 ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
+ E V + + ++LD TYCN + FPS++ + I ER+
Sbjct: 214 MKLEPCLGEFVGS------EAVFLDTTYCNPKFVFPSQDESVDYIVEAIERI 259
>gi|222619063|gb|EEE55195.1| hypothetical protein OsJ_03041 [Oryza sativa Japonica Group]
Length = 1455
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 84/161 (52%), Gaps = 31/161 (19%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFL+H HSDH GL +W RG +FCS LTA+L L+ VL + VV
Sbjct: 77 YFLSHFHSDHYTGLGPSWRRGLVFCSPLTARL-----------LVSVLSVPPQL---VVV 122
Query: 78 PSSGEKTFVE---VIAIDANHCPGILGCSVMLLFRG---DFGCLLYTGDFRWEASNERAE 131
+G + V+ V+A+DANHCPG +V LFR + ++TGDFR+ S
Sbjct: 123 LDAGVRVTVDGWCVVAVDANHCPG----AVQFLFRSSGPNAERYVHTGDFRFSQSM---- 174
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
I L++ + D V +LD TYCN + FP ++ + + +
Sbjct: 175 ITEPNLLEFIGADAV---FLDTTYCNPKFTFPPQKESLEYV 212
>gi|397636771|gb|EJK72411.1| hypothetical protein THAOC_06062 [Thalassiosira oceanica]
Length = 702
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 106/243 (43%), Gaps = 33/243 (13%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSIS 74
S YFLTH HSDH G++ W G ++CS TA L + G++ + L + +
Sbjct: 454 SSNYFLTHFHSDHYGGITKNWNHGTIYCSLPTANLVHRQL-GVEKRFLHPLPMNT--PFV 510
Query: 75 VVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGR 134
VVS G+ V V +DANHCPG ++M LF +L+ GDFRW +NE
Sbjct: 511 VVSEKGGKHVPVTVTLLDANHCPG----AIMFLFEVGNRRILHVGDFRW--NNELHMRMP 564
Query: 135 NTLVKALKDDVVDILYLDNTYCNSSYAFPSR--------EVAAQQIWVWPERL--QTMHL 184
+D LYLD TYC Y P++ EVA +++ + +T+ L
Sbjct: 565 QLRSLGCGSPRLDELYLDTTYCAEKYTLPTQAEAIDAAIEVATKEVNYSKKNASNKTLFL 624
Query: 185 LGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLP 244
G + I + L V +F + + + MP G P V + +P
Sbjct: 625 FGAYTIGKERIYLL----VCGRAFQNEGVRN----------MPVGSPARVSQSRSNAGIP 670
Query: 245 GSL 247
G +
Sbjct: 671 GRV 673
>gi|311705711|gb|ADQ01121.1| artemis [Alouatta sara]
Length = 692
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 94/182 (51%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPALKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWETRIMSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G G +LYTGDFR + E R L+ + +KD + +YLD T+C+ + PS
Sbjct: 125 QGSNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFFQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|73949006|ref|XP_544251.2| PREDICTED: protein artemis isoform 1 [Canis lupus familiaris]
Length = 693
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 38/183 (20%)
Query: 6 ISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRLTAKL 49
IS+DR+ ++ YFL+H H DH +GL R P L+CS +T +L
Sbjct: 14 ISIDRFDRENLKARAYFLSHCHKDHMKGL-----RAPALKRRLECSLKVRLYCSPVTKEL 68
Query: 50 FPLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLL 107
L P R++ +I + I +V +SGEK + V + A HCPG SVM L
Sbjct: 69 L-LTSPRYRFWEKRIISIEIETPTQIPLVDEASGEKEDIVVTLLPAGHCPG----SVMFL 123
Query: 108 FRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFP 163
F+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y P
Sbjct: 124 FQGNNGTVLYTGDFRM----AKGEAARMELLHSGGRVKD--IQSVYLDTTFCDPKFYQIP 177
Query: 164 SRE 166
SRE
Sbjct: 178 SRE 180
>gi|296087222|emb|CBI33596.3| unnamed protein product [Vitis vinifera]
Length = 1390
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 86/172 (50%), Gaps = 31/172 (18%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW--HS 72
S YFL+H HSDH GLS W+ G +FCS TA+L L+ VL + S +
Sbjct: 69 SVTYFLSHFHSDHYSGLSPKWSNGIIFCSNTTARL-----------LVEVLGVSSLFVYP 117
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-----GDFGCLLYTGDFRWEASN 127
++V P + EV +DANHCPG +V LF+ G F ++TGDFR+ +
Sbjct: 118 LAVSQPVLIDG--CEVALLDANHCPG----AVQFLFKVPGVDGRFERYVHTGDFRF-CES 170
Query: 128 ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
+ E V + + ++LD TYCN + FPS++ + I ER+
Sbjct: 171 MKLEPCLGEFVGS------EAVFLDTTYCNPKFVFPSQDESVDYIVEAIERI 216
>gi|403358146|gb|EJY78711.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Oxytricha trifallax]
Length = 673
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 37/169 (21%)
Query: 17 VYFLTHLHSDHTQGLS------------SAWARGPLFCSRLTAKLFPLKFPGLDLSLIRV 64
+FL+H+H DH +GLS W G ++ S + + L+FP L +R
Sbjct: 59 TFFLSHMHEDHLRGLSKRSEYGNYGGPDEDWQWGTIYTSPKSKNILLLRFPNLK-PYVRA 117
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
L++ ++I ++T V+ +ANHCPG +VM LF+G G +L+TGDFR++
Sbjct: 118 LELYKQYTIK-------DRT---VMLYEANHCPG----AVMFLFKGAKGTVLHTGDFRFK 163
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIW 173
S ++ + +D LYLDNT+ + FP +E A ++++
Sbjct: 164 PS----------MIDYFTNIKIDYLYLDNTFATTDEDFPPQEEAFEKLY 202
>gi|407851008|gb|EKG05145.1| hypothetical protein TCSYLVIO_003789 [Trypanosoma cruzi]
Length = 681
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 35/185 (18%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
++FL+H HSDH G++ W G ++ SR TA + + G+ S ++ +D ++ S+
Sbjct: 48 LFFLSHFHSDHYNGITGGWNHGTIYASRGTANILCWRL-GIPESRVKRMDFCVTYTFSLK 106
Query: 77 SPS------------SGEKTFVEVIAIDANHCPGILGCSVMLLFRGD-FGCLLYTGDFRW 123
+ + F V I A HCPG SVM LFR FG +L+TGDFR+
Sbjct: 107 NGALLYETTWEEEEWRCSDEFFSVTLIPAGHCPG----SVMFLFRSPVFGTVLHTGDFRF 162
Query: 124 --EASN--------------ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
E N + ++ N ++K++ VD+L+LDNT+C+ + FPSR
Sbjct: 163 TREQPNSSLLPHVPRMPHFQKEIDMMANPVLKSIAGK-VDVLFLDNTFCDERFNFPSRAD 221
Query: 168 AAQQI 172
+ +++
Sbjct: 222 SLREV 226
>gi|194227144|ref|XP_001498525.2| PREDICTED: protein artemis isoform 1 [Equus caballus]
Length = 693
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 94/182 (51%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + I +V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWEKRIISIEIETPTQIPLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IQSVYLDTTFCDPKFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|302664058|ref|XP_003023665.1| DNA repair protein Pso2/Snm1, putative [Trichophyton verrucosum HKI
0517]
gi|291187671|gb|EFE43047.1| DNA repair protein Pso2/Snm1, putative [Trichophyton verrucosum HKI
0517]
Length = 845
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 83/174 (47%), Gaps = 28/174 (16%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD + EG YFL+H HSDH GL+S+W+ GP++CS +TA L + + +
Sbjct: 418 ITVDAFRYGAIEGCNAYFLSHYHSDHYGGLTSSWSHGPIYCSTVTANLVKQQI-KVKPDM 476
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------- 114
+ L+ I + V V I ANHCPG S + LF G
Sbjct: 477 VVELEFEQKTEIP-------DTDGVSVTMIAANHCPG----SSLFLFEKAIGKGKNARIH 525
Query: 115 -LLYTGDFRWEASNERAEIGRNTL----VKALKDDVVDILYLDNTYCNSSYAFP 163
+L+ GDFR +++ + R + L + +D+ YLD TY N YAFP
Sbjct: 526 RILHCGDFRASSAHINHPLLRPNIQDRHTGKLSEQKIDVCYLDTTYLNPKYAFP 579
>gi|326476055|gb|EGE00065.1| DNA repair protein Pso2/Snm1 [Trichophyton tonsurans CBS 112818]
Length = 848
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 79/168 (47%), Gaps = 34/168 (20%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKF---PGL--DLSLIRVLDI 67
EG YFL+H HSDH GL+S+W+ GP++CS +TA L + P + +L R +I
Sbjct: 432 EGCNAYFLSHYHSDHYGGLTSSWSHGPIYCSTVTANLVKQQIKVKPDMVVELEFERKTEI 491
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTG 119
+SV I ANHCPG S + LF G +L+ G
Sbjct: 492 PGTDGVSVT-------------MITANHCPG----SSLFLFEKPIGKGKNARIHRILHCG 534
Query: 120 DFRWEASNERAEIGRNTL----VKALKDDVVDILYLDNTYCNSSYAFP 163
DFR +++ + R + + + +D+ YLD TY N YAFP
Sbjct: 535 DFRASSAHINHPLLRPNIQDRHTGKITEQKIDVCYLDTTYLNPKYAFP 582
>gi|18490820|gb|AAH22254.1| DCLRE1C protein [Homo sapiens]
Length = 434
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|326484025|gb|EGE08035.1| DNA repair protein Pso2/Snm1 [Trichophyton equinum CBS 127.97]
Length = 848
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 79/168 (47%), Gaps = 34/168 (20%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKF---PGL--DLSLIRVLDI 67
EG YFL+H HSDH GL+S+W+ GP++CS +TA L + P + +L R +I
Sbjct: 432 EGCNAYFLSHYHSDHYGGLTSSWSHGPIYCSTVTANLVKQQIKVKPDMVVELEFERKTEI 491
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTG 119
+SV I ANHCPG S + LF G +L+ G
Sbjct: 492 PGTDGVSVT-------------MITANHCPG----SSLFLFEKPIGKGKNARIHRILHCG 534
Query: 120 DFRWEASNERAEIGRNTL----VKALKDDVVDILYLDNTYCNSSYAFP 163
DFR +++ + R + + + +D+ YLD TY N YAFP
Sbjct: 535 DFRASSAHINHPLLRPNIQDRHTGKITEQKIDVCYLDTTYLNPKYAFP 582
>gi|393240522|gb|EJD48048.1| DRMBL-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 575
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 84/188 (44%), Gaps = 43/188 (22%)
Query: 1 MEKGLISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M+ I+VD + G YFL+H HSDH LSS+W GP++CS TA L + G
Sbjct: 135 MQGMPIAVDAFRYGKIPGVTAYFLSHAHSDHYTNLSSSWEHGPIYCSVTTANLI-VHLLG 193
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-- 114
+D + L V P +G VEV I+ANHCPG S + LF G
Sbjct: 194 VDRKWVHPLP----EDTPTVVPDTGG---VEVTVIEANHCPG----SSLFLFSGKQTVNA 242
Query: 115 -----------------LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCN 157
L+ GDFR R+ + A+K +D++YLD TY N
Sbjct: 243 GDSAFHSHGVGADKVFRYLHCGDFRASP--------RHVMHPAIKGKRLDLIYLDTTYLN 294
Query: 158 SSYAFPSR 165
+ Y FP +
Sbjct: 295 AKYCFPPQ 302
>gi|164658888|ref|XP_001730569.1| hypothetical protein MGL_2365 [Malassezia globosa CBS 7966]
gi|159104465|gb|EDP43355.1| hypothetical protein MGL_2365 [Malassezia globosa CBS 7966]
Length = 503
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 80/177 (45%), Gaps = 39/177 (22%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLSS W GP++C+ T++L K +D +R + +
Sbjct: 110 EGCTAYFLTHFHSDHYAGLSSTWKHGPIYCTPATSRLVHAKL-RVDKMWLRPIAL----D 164
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------------------ 114
+ + P SG V V IDANHCPG S + LF G
Sbjct: 165 VRTLIPDSGG---VYVTCIDANHCPG----SCLFLFEGPLTAHILPSSIRNPHIGTSRVF 217
Query: 115 -LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
L+ GDFR +++ AL+ ++D +YLD TY + Y FP + Q
Sbjct: 218 RYLHCGDFRACPAHKTH--------PALQLGILDAIYLDTTYLDPRYCFPPQAQVVQ 266
>gi|119606655|gb|EAW86249.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_b [Homo sapiens]
Length = 434
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWKKRIISIEIEAPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|212544306|ref|XP_002152307.1| DNA repair protein Pso2/Snm1, putative [Talaromyces marneffei ATCC
18224]
gi|210065276|gb|EEA19370.1| DNA repair protein Pso2/Snm1, putative [Talaromyces marneffei ATCC
18224]
Length = 826
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 25/174 (14%)
Query: 5 LISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
I+VD + EG Q YFL+H HSDH GL+ +W+ GP++CSR+T L + L +
Sbjct: 404 FITVDAFRYGAVEGCQAYFLSHFHSDHYGGLTGSWSHGPIYCSRVTGNLVRQQ---LKVD 460
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-----GDFGCL 115
V+D+ + + V + G V V + ANHCPG S + LF G +
Sbjct: 461 PKYVVDL-EFEKKTEVPNTKG----VYVTMLPANHCPG----SSLFLFEKIMDNGRIHRV 511
Query: 116 LYTGDFRWEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
L+ GDFR ++ + + + ++ A + +D+ YLD TY N Y+FP +
Sbjct: 512 LHCGDFRACPAHVQHPLLKPDILDAKSGQSRQQRLDVCYLDTTYLNPKYSFPPQ 565
>gi|311705723|gb|ADQ01127.1| artemis [Callicebus cupreus]
Length = 692
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 94/182 (51%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPALKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + I +V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWEKRIMSIEIETPTQIPLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IQSVYLDTTFCDRRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|452001520|gb|EMD93979.1| hypothetical protein COCHEDRAFT_1169437 [Cochliobolus
heterostrophus C5]
Length = 786
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 28/182 (15%)
Query: 5 LISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
I+VD + +G YFL+H HSDH GLS++W GP++CS++T L + +D
Sbjct: 357 FIAVDAFRYGAVKGQNAYFLSHFHSDHYVGLSASWKHGPIYCSKVTGNLVRQQL-RVDPK 415
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------ 114
+ LD + P +G V V I ANHCPG S + LF + G
Sbjct: 416 WVVDLDF----EVKTEVPGTG---GVFVTMISANHCPG----SSLFLFEKEAGKDDNQKL 464
Query: 115 --LLYTGDFRWEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSREVA 168
+L+ GDFR ++ + R ++ A+ + +D YLD TY N YAFP ++
Sbjct: 465 QRVLHCGDFRACQAHVEHPLLRPDVLDAVSGKSRQQKLDACYLDTTYLNPKYAFPPQQQV 524
Query: 169 AQ 170
Q
Sbjct: 525 IQ 526
>gi|189204073|ref|XP_001938372.1| DNA cross-link repair protein pso2/snm1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985471|gb|EDU50959.1| DNA cross-link repair protein pso2/snm1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 895
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 28/182 (15%)
Query: 5 LISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
I+VD + +G YFL+H HSDH GL+++W GP++CS++T L + L +
Sbjct: 466 FIAVDAFRYGAVKGQNAYFLSHFHSDHYVGLTASWKHGPIYCSKVTGNLVRQQ---LRVD 522
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------ 114
V+D+ V E FV +I+ ANHCPG S + LF + G
Sbjct: 523 PKWVIDLDFEEKTEV---PGTEGVFVTMIS--ANHCPG----SSLFLFEKEIGKGKNPRL 573
Query: 115 --LLYTGDFRWEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSREVA 168
+L+ GDFR ++ + R ++ A+ + +D YLD TY N YAFP ++
Sbjct: 574 QRVLHCGDFRACQAHIEHPLLRPNVLDAVSGKNRQQKLDACYLDTTYLNPKYAFPPQQQV 633
Query: 169 AQ 170
Q
Sbjct: 634 IQ 635
>gi|432922357|ref|XP_004080312.1| PREDICTED: DNA cross-link repair 1A protein-like [Oryzias latipes]
Length = 879
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 55/320 (17%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GL+ + P++C+++T L K + + +L + +
Sbjct: 561 EGISAYFLTHFHSDHYGGLTRN-STLPIYCNKITGNLVKSKL-RVAEEYVHILPMNTEVI 618
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
+ V + +DANHCP G +++L F D +L+TGDFR + S E
Sbjct: 619 VE----------GVRICLLDANHCP---GAAMLLFFLPDGQTVLHTGDFRADPSME---- 661
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV--------AAQQIWVWPERL----- 179
L V LYLD TYC+ Y FP ++ A + + + P L
Sbjct: 662 ----TYPELLGCRVQTLYLDTTYCSPEYTFPKQQEVINFAANRAFESVTLNPRTLVVCGS 717
Query: 180 ----QTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMH---PTIGIMPSGLPW 232
+ L ++ +K SL++ + + ++ T + ++P +
Sbjct: 718 YSVGKEKVFLALAEVLGSKVSLSKDKYNTMCCLESEQIKKRITTDWKGAQVHVLPM-MQL 776
Query: 233 VVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYI------YSVPYS 286
K L+ + S + + ++ TG T + +GSVD I Y +PYS
Sbjct: 777 TFKKLQDHLARYSSQYDQLVA-FKPTGWT----FSQQVGSVDDIQPQISGNVSVYGIPYS 831
Query: 287 DHSCFTEIEEFLNLVQPSNI 306
+HS F E++ F+ ++P I
Sbjct: 832 EHSSFLELKRFVQWLRPLKI 851
>gi|363754123|ref|XP_003647277.1| hypothetical protein Ecym_6059 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890914|gb|AET40460.1| hypothetical protein Ecym_6059 [Eremothecium cymbalariae
DBVPG#7215]
Length = 585
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 34/164 (20%)
Query: 11 WTEGSQV--YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIG 68
+ + S+V YFL+H H+DH QGL +W +G LFCS++TA L KF +D+ I +L +
Sbjct: 188 FMDNSEVKYYFLSHFHADHYQGLCQSWKQGRLFCSQITANLVISKF-KIDVDQITILKLN 246
Query: 69 SWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-----CLLYTGDFRW 123
I +P + +DANHCPG L ++L DF +L+TGDFR
Sbjct: 247 EPLYI---TPR------LRCFPLDANHCPGAL---ILLFEELDFNGSVLHSVLHTGDFR- 293
Query: 124 EASNERAEIGRNTLVKALKDDV----VDILYLDNTYCNSSYAFP 163
N ++++L +D +YLD TY N +Y FP
Sbjct: 294 ---------ATNGMIRSLDQLTCGRELDSVYLDTTYLNPNYHFP 328
>gi|307107345|gb|EFN55588.1| hypothetical protein CHLNCDRAFT_134115 [Chlorella variabilis]
Length = 886
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H+DH +GL+ + RG L+CS TA L + + + IR + + S I V
Sbjct: 573 WFLTHFHADHYKGLTGRFDRGTLYCSPPTALLVQQQLR-VKPACIRCVPLNS--PILVEG 629
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--LLYTGDFRWEASNERAEIGRN 135
V V +DANHCPG +VM+LF GC +L+TGD R E+
Sbjct: 630 --------VRVTFLDANHCPG----AVMILFE-PPGCRPVLHTGDCRL-----IPEMQHE 671
Query: 136 TLVKALKDDVVDILYLDNTYCNSSYAFPSRE----VAAQQIWVWPERLQTMHLLGFHDIF 191
+ A++ DI+ LD TYC+ YAFPS++ A + +T+ L G + I
Sbjct: 672 AALAAVRGQ-ADII-LDTTYCSPEYAFPSQQEVLRFAIDAVKAEAFNPKTLFLFGSYTIG 729
Query: 192 TTKTSLTRVRAVPRYSF-------SIDTLE-------SLNTMHPTIGIMPSGLPWVVKPL 237
+ L R + R + +D LE L T T + L W+V
Sbjct: 730 KERLFLEAARVLQRRIYVSAAKRKVLDCLELPQEYASLLTTDDHTTNLHAVPL-WMVSQK 788
Query: 238 KGGGSLPGSLFSSYQSK------WRATGGTQTEKLKEALGSVDRFHK---YIYSVPYSDH 288
L Y+ + ++ TG T +A R K Y VPYS+H
Sbjct: 789 H-----MAKLLKHYRGRFSTAVGFQPTGWTHQRDASQAGARGRRRQKGTIITYQVPYSEH 843
Query: 289 SCFTEIEEFLNLVQPSNIRGIVSS 312
S F+E+ +F++ +P +I V+S
Sbjct: 844 SSFSELRQFVDWFRPVSIIPSVNS 867
>gi|341038670|gb|EGS23662.1| eukaryotic translation initiation factor 3-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1494
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 21/162 (12%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G + YFL+H HSDH GL++ W GP++CS++T L + L + V+++ +++
Sbjct: 1030 KGCKAYFLSHFHSDHYMGLTANWTHGPIYCSKVTGSLVKSQ---LRTAAKYVVEL-EFNT 1085
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-----GDFGCLLYTGDFRWEASN 127
V + G V V I ANHCPG S M LF G +L+ GDFR ++
Sbjct: 1086 TVAVPDTDG----VTVTMIPANHCPG----SSMFLFEKILSGGRVQRILHCGDFRACPAH 1137
Query: 128 ERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
+ + V A+ K +D+ YLD TY N Y+FP +
Sbjct: 1138 VEHPLLKPETVDAISSRTKQQKIDVCYLDTTYLNPRYSFPPQ 1179
>gi|317031918|ref|XP_001393666.2| DNA repair protein Pso2/Snm1 [Aspergillus niger CBS 513.88]
Length = 818
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+ +W GP++CSR TA L + +D + L+
Sbjct: 403 EGCNAYFLSHFHSDHYIGLTGSWRHGPIYCSRPTANLVCQQL-KVDRKWLVPLEFERKTE 461
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRW- 123
I P +G +V I+ANHCPG S + LF G +L+ GDFR
Sbjct: 462 I----PDTG---GAQVTLIEANHCPG----SAIFLFEKSMGSGPSQRTHRVLHCGDFRAS 510
Query: 124 ----EASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
+ + R EI KA + +D YLD TY + YAFP +E Q
Sbjct: 511 PLHVQHALLRPEIADPATGKA-RQQRIDACYLDTTYLSPKYAFPGQEDVIQ 560
>gi|218189475|gb|EEC71902.1| hypothetical protein OsI_04671 [Oryza sativa Indica Group]
Length = 642
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 154/360 (42%), Gaps = 52/360 (14%)
Query: 1 MEKGL-ISVDRWTEGSQVY---FLTHLHSDHT----QGLSSAWARGPLFCSRLTAKLFPL 52
M +GL +VD W S+ FLTH H DH S G ++ +RLT L
Sbjct: 5 MPRGLPFAVDTWGPSSRRRRHRFLTHAHRDHLVAAGGAADSGECPGAVYATRLTLDLALR 64
Query: 53 KFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
FP L+ +++G ++ V P+ V A DANHCPG +VM LF G F
Sbjct: 65 HFPRLERGEFVEMEVGK--TVVVDDPAGA----FSVTAYDANHCPG----AVMFLFEGQF 114
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKALKDDV--VDILYLDNTYCNSSYAFPSREVAAQ 170
G +L+TGD R + + + K K+++ +D ++LD T+ PS+E A Q
Sbjct: 115 GSILHTGDCRLTPDCVQ-NLPLKYIAKKGKENICRLDFVFLDCTFSKCFLKLPSKESAIQ 173
Query: 171 QI--WVW-----PERLQTMHLLGFHDIF--TTKTSLTRVRAVPRYSFSIDTLESLNTMHP 221
Q+ +W P LLG +I ++T +++ R + D +L+ + P
Sbjct: 174 QVIACIWKHPHAPFVYLACDLLGHEEILIEVSRTFGSKIYVDKRRNS--DCFRALSLIAP 231
Query: 222 TIGIMPSGLPWVVKPLKG-------------GGSLPGSLFSSYQSKWRA-TGGTQTEKLK 267
I + + + P LF ++W A +Q L
Sbjct: 232 EIITEDPSCRFQILGFQNLYDKACTNIEEARASLQPEPLFIRPSTQWYAHCAQSQKPSLT 291
Query: 268 EALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
EA+ +D ++ + +S HS E+E+ L L+QP + I ++ C+ L Y + C
Sbjct: 292 EAV--LDGCG--VWHICFSIHSSRDELEQALELLQPQWV--ISTTPPCFAMELSYVKKKC 345
>gi|302414560|ref|XP_003005112.1| DNA cross-link repair protein pso2/snm1 [Verticillium albo-atrum
VaMs.102]
gi|261356181|gb|EEY18609.1| DNA cross-link repair protein pso2/snm1 [Verticillium albo-atrum
VaMs.102]
Length = 896
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 81/166 (48%), Gaps = 24/166 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G Q YFL+H HSDH GL++ W GP++CS++T L ++ + I LD
Sbjct: 442 KGCQAYFLSHFHSDHYIGLTAHWTHGPIYCSKVTGDLCIMQL-KVAPKWIVALDFEE--- 497
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+V P +G V V I ANHCPG S + LF G L+ GDFR
Sbjct: 498 -TVEVPGTG---GVMVTMIPANHCPG----SSLFLFEKPHGKGANVKKQRYLHCGDFRAC 549
Query: 125 ASNERAEIGR----NTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
++ + + + + LK +D+ YLD TY N Y+FP +E
Sbjct: 550 PAHVEHPLLKPDVQDAITGKLKQQRIDLCYLDTTYLNPRYSFPPQE 595
>gi|402073709|gb|EJT69261.1| DNA cross-link repair protein SNM1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 893
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 26/168 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFL+H HSDH GL++ WA GP++CS++T L + L + V+++ +
Sbjct: 407 EGCKAYFLSHFHSDHYIGLTAKWAHGPIYCSKVTGSLIKSQ---LRTAAQYVVEL-DFEE 462
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF----------RGDFGCLLYTGDFR 122
VV ++G V V I ANHCPG S + LF R +L+ GDFR
Sbjct: 463 RFVVPDTNG----VAVTMIPANHCPG----SSLFLFEKTTPGRPGDRPRIQRILHCGDFR 514
Query: 123 WEASNERAEIGRNTLVKALKDDV----VDILYLDNTYCNSSYAFPSRE 166
++ + R + A+ + +D+ YLD TY N Y+FP ++
Sbjct: 515 ACPAHSDHALLRPRITDAVSGKIRTQKIDVCYLDTTYLNPRYSFPPQD 562
>gi|358391575|gb|EHK40979.1| hypothetical protein TRIATDRAFT_127244 [Trichoderma atroviride IMI
206040]
Length = 785
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 34/170 (20%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG-----LDLSLIRVLDI 67
EG Q YFL+H HSDH GL+++W GP++CS++T L + ++L + D+
Sbjct: 339 EGCQAYFLSHFHSDHYIGLTASWRHGPIYCSKVTGSLVKQQLRTAAKWVVELEFEKPYDV 398
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTG 119
+V + ANHCPG S + LF FG +L+ G
Sbjct: 399 PGTEGATVT-------------MMPANHCPG----SSLFLFEKPFGNGPNKRTKRILHCG 441
Query: 120 DFRWEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
DFR + R + ++ ++ ++ + +DI YLD TY N Y+FP +
Sbjct: 442 DFRACPEHVRHPLLKSDVIDSISGKSRQQRIDICYLDTTYLNPRYSFPPQ 491
>gi|194767629|ref|XP_001965917.1| GF11594 [Drosophila ananassae]
gi|190619760|gb|EDV35284.1| GF11594 [Drosophila ananassae]
Length = 676
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 143/321 (44%), Gaps = 64/321 (19%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFLTH H+DH GL+ ++ PL+ S +TA+L L F +D I +D+ ++ V +
Sbjct: 318 YFLTHYHADHYIGLTKKFSH-PLYMSPITARLVRL-FIKVDEKYIHEIDVD--ETVMVDN 373
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
VEV AI+ANHCPG +VM F+ G C+L+TGDFR + E + N
Sbjct: 374 --------VEVTAIEANHCPG----AVMFFFKLSSGECILHTGDFRACSEMESLPLFWN- 420
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAF----PSREVAAQQIWVWPERLQTMHL-------- 184
+ +D+LYLD TY N +Y F S + A + + E+ +
Sbjct: 421 ------NTNIDLLYLDTTYLNKNYNFCHQSESVDRALHLVGAFIEKNPFKRILIVCGSYV 474
Query: 185 -------LGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPT---IGIMPSG---LP 231
L + F+ K R+ D L+ + T PT + ++P G P
Sbjct: 475 IGKEKIWLALAEAFSLKVWTESSRSDAISCLGWDDLQVVLTDDPTKANLHVIPMGKISYP 534
Query: 232 WVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYS--VPYSDHS 289
+V+ FS ++ ++ G + ++ S F K I + + YS+HS
Sbjct: 535 SLVE-----------YFSQFEDQYDMLLGIRPSGWEK--NSKPSFGKKISTIGIEYSEHS 581
Query: 290 CFTEIEEFLNLVQPSNIRGIV 310
+ E+E F+ ++P + V
Sbjct: 582 SYKELERFVRFLKPKRVISTV 602
>gi|134078210|emb|CAK40289.1| unnamed protein product [Aspergillus niger]
Length = 809
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+ +W GP++CSR TA L + +D + L+
Sbjct: 424 EGCNAYFLSHFHSDHYIGLTGSWRHGPIYCSRPTANLVCQQL-KVDRKWLVPLEFERKTE 482
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRW- 123
I P +G +V I+ANHCPG S + LF G +L+ GDFR
Sbjct: 483 I----PDTG---GAQVTLIEANHCPG----SAIFLFEKSMGSGPSQRTHRVLHCGDFRAS 531
Query: 124 ----EASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
+ + R EI KA + +D YLD TY + YAFP +E Q
Sbjct: 532 PLHVQHALLRPEIADPATGKA-RQQRIDACYLDTTYLSPKYAFPGQEDVIQ 581
>gi|346979369|gb|EGY22821.1| DNA cross-link repair protein pso2/snm1 [Verticillium dahliae
VdLs.17]
Length = 922
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 81/166 (48%), Gaps = 24/166 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G Q YFL+H HSDH GL++ W GP++CS++T L ++ + I LD
Sbjct: 447 KGCQAYFLSHFHSDHYIGLTAHWTHGPIYCSKVTGDLCIMQL-KVAPKWIVALDFEE--- 502
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+V P +G V V I ANHCPG S + LF G L+ GDFR
Sbjct: 503 -TVEVPGTG---GVMVTMIPANHCPG----SSLFLFEKPHGKGANVKKQRYLHCGDFRAC 554
Query: 125 ASNERAEIGR----NTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
++ + + + + LK +D+ YLD TY N Y+FP +E
Sbjct: 555 PAHVEHPLLKPDVQDAITGKLKQQRIDLCYLDTTYLNPRYSFPPQE 600
>gi|347838544|emb|CCD53116.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1001
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 81/170 (47%), Gaps = 32/170 (18%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G YFL+H HSDH GL+S W+ GP++CS++T L + L + V+ I
Sbjct: 572 KGCNAYFLSHFHSDHYIGLTSTWSHGPIYCSKVTGNLVKQQ---LKVDPKWVVSIEFDDK 628
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ V + V VI I ANHCPG S + LF G +L+ GDFR
Sbjct: 629 LEVPNTQG-----VSVIMIPANHCPG----SSLFLFEKTTGGGQRPKVQRILHCGDFRAC 679
Query: 125 ASNERAEIGRNTLVKALKDDV--------VDILYLDNTYCNSSYAFPSRE 166
A I L+ + D V +D+ YLD TY N Y+FPS++
Sbjct: 680 P----AHIAHPLLMPNVVDSVNGKTKQQKIDVCYLDTTYLNPKYSFPSQD 725
>gi|414880948|tpg|DAA58079.1| TPA: putative DNA ligase family protein, partial [Zea mays]
Length = 885
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 87/173 (50%), Gaps = 33/173 (19%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFP--LKFPGLDLSLIRVLDIGSWHS 72
S YFL+H HSDH GL +W RG +FCS TA+L L P L+ LDIG
Sbjct: 75 SVAYFLSHFHSDHYSGLGPSWRRGLVFCSAPTARLVSSVLSVPP---QLVVSLDIG---- 127
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF-----RGDFGCLLYTGDFRWEASN 127
+ + G V A+DANHCPG +V LF R + ++TGDFR+ S
Sbjct: 128 VRITVDGWG------VTAVDANHCPG----AVQFLFASPGPRAER--YVHTGDFRYTESM 175
Query: 128 ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQ 180
R L++ ++ D V +LD TYCN + FPS+E + I +R++
Sbjct: 176 TRDP----NLLEFVRADAV---FLDTTYCNPKFTFPSQEDSVDYIVNAIKRVK 221
>gi|330923075|ref|XP_003300087.1| hypothetical protein PTT_11241 [Pyrenophora teres f. teres 0-1]
gi|311325940|gb|EFQ91820.1| hypothetical protein PTT_11241 [Pyrenophora teres f. teres 0-1]
Length = 897
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 28/182 (15%)
Query: 5 LISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
I+VD + +G YFL+H HSDH GL+++W GP++CS++T L + L +
Sbjct: 468 FIAVDAFRYGAVKGQNAYFLSHFHSDHYVGLTASWKHGPIYCSKVTGNLVRQQ---LRVD 524
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------ 114
V+D+ V E FV +I+ ANHCPG S + LF + G
Sbjct: 525 PKWVVDLEFEEKTEV---PGTEGVFVTMIS--ANHCPG----SSLFLFEKEIGKGKSPRL 575
Query: 115 --LLYTGDFRWEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSREVA 168
+L+ GDFR ++ + R ++ A+ + +D YLD TY N YAFP ++
Sbjct: 576 QRVLHCGDFRACQAHVEHPLLRPNVLDAVSGKNRQQKLDACYLDTTYLNPKYAFPPQQQV 635
Query: 169 AQ 170
Q
Sbjct: 636 IQ 637
>gi|395827301|ref|XP_003786843.1| PREDICTED: protein artemis [Otolemur garnettii]
Length = 692
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 28/181 (15%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVCLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SG+K + V + A HCPG SVM LF
Sbjct: 70 -LTSPKYRFWEKRIISIEIETPTQISLVDEASGKKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPS 178
Query: 165 R 165
R
Sbjct: 179 R 179
>gi|395539074|ref|XP_003771498.1| PREDICTED: protein artemis [Sarcophilus harrisii]
Length = 692
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 151/347 (43%), Gaps = 61/347 (17%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRQNLTARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVHLYCSPV 64
Query: 46 TAKLFPL--KFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L ++ + +I L+I + IS++ +SGEK V V + A HCPG S
Sbjct: 65 TKELLLTNSRYSFWEKRII-ALEIETPTQISLIDEASGEKEEVVVTLLPAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSS-YAF 162
VM LF+G+ G +LYTGDFR A E A + +KD + +YLD T+C+ Y
Sbjct: 120 VMFLFQGNNGTVLYTGDFRL-AKGEAARMEFLHSGNRVKD--IQSVYLDTTFCDPKYYQI 176
Query: 163 PSR--------EVAAQQIWVWPER---LQTMHLLGFHDIFTTKT----SLTRVRAVPRYS 207
PSR E+ I + P L G+ +FT + + V + +
Sbjct: 177 PSRMECLNGILELVRSWITLSPYHIVWLNCKAAYGYEYLFTNLSEEFGTQVHVNKLDMFK 236
Query: 208 FSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG-------- 259
D L L T T I P V + + G LP + S +
Sbjct: 237 NMPDILYHLTTDRHT-QIHACRHPRVEEFFR-GNRLPCGITSKNGTPLHIISIKPSTMWF 294
Query: 260 GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
G +T K + R + Y +S HS ++EI++FL+ ++P N+
Sbjct: 295 GERTRKTNVIM----RTGESSYRACFSFHSSYSEIKDFLSYIRPVNV 337
>gi|169624035|ref|XP_001805424.1| hypothetical protein SNOG_15267 [Phaeosphaeria nodorum SN15]
gi|160705099|gb|EAT77492.2| hypothetical protein SNOG_15267 [Phaeosphaeria nodorum SN15]
Length = 936
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 5 LISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
I+VD + +G + YFL+H HSDH GL+S W+ GP++CS++TA L + +D S
Sbjct: 509 FIAVDAFRYGAVKGQKAYFLSHFHSDHYIGLTSTWSHGPIYCSKVTANLVRQQL-RVDPS 567
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------ 114
+ LD + + + V + G V V I ANHCPG S + LF +
Sbjct: 568 WVVDLD---FEARTEVPGTQG----VFVTMISANHCPG----SSLFLFEKETSNGKPSKL 616
Query: 115 --LLYTGDFRWEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
+L+ GDFR ++ + R ++ + K +D+ YLD TY N YAFP +
Sbjct: 617 QRVLHCGDFRACQAHIEHPLLRPDVLDVVSGRNKQQKLDVCYLDTTYLNPKYAFPPQ 673
>gi|171684601|ref|XP_001907242.1| hypothetical protein [Podospora anserina S mat+]
gi|170942261|emb|CAP67913.1| unnamed protein product [Podospora anserina S mat+]
Length = 916
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 21/163 (12%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFL+H HSDH GL++ W GP++CS++T L + L + V+++ +
Sbjct: 452 EGCKAYFLSHFHSDHYIGLTANWTHGPIYCSKVTGSLVKTQ---LKTAAKYVVELEFDKT 508
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-----LLYTGDFR-WEAS 126
+ V V V I ANHCPG S + LF G +L+ GDFR +A
Sbjct: 509 VPVPHTKG-----VTVTMIPANHCPG----SSLFLFEKAMGGGKTHRILHCGDFRACQAH 559
Query: 127 NERAEIGRNTL---VKALKDDVVDILYLDNTYCNSSYAFPSRE 166
E + T+ K +D+ YLD TY N Y+FP ++
Sbjct: 560 LEHPHLRPETIDAVTGKTKHQKIDVCYLDTTYLNPKYSFPPQK 602
>gi|413943530|gb|AFW76179.1| putative DNA ligase family protein [Zea mays]
Length = 343
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 80/163 (49%), Gaps = 29/163 (17%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFP--LKFPGLDLSLIRVLDIGSWHS 72
S YFL+H HSDH GL +W RG +FCS TA+L L P L+ LDIG
Sbjct: 44 SVAYFLSHFHSDHYSGLGPSWCRGLVFCSAPTARLVSSVLSVPP---QLVVSLDIG---- 96
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC---LLYTGDFRWEASNER 129
+ + G V A+DANHCPG +V LF ++TGDF + S R
Sbjct: 97 VRITVDGWG------VTAVDANHCPG----AVQFLFASTGSKAKRYVHTGDFHYTESMTR 146
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
L++ ++ D V +LD TYCN + FPSRE + I
Sbjct: 147 DP----NLLEFVRADAV---FLDTTYCNPKFTFPSREDSVDYI 182
>gi|367020838|ref|XP_003659704.1| hypothetical protein MYCTH_2052357 [Myceliophthora thermophila ATCC
42464]
gi|347006971|gb|AEO54459.1| hypothetical protein MYCTH_2052357 [Myceliophthora thermophila ATCC
42464]
Length = 903
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 20/162 (12%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFL+H HSDH GL++ W GP++CS++T L + L + V+++ +
Sbjct: 424 EGCKAYFLSHFHSDHYMGLTANWTHGPIYCSKVTGSLVKSQ---LKTAAKYVVELEFEET 480
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR----GDFGCLLYTGDFRWEASNE 128
+ V P +G V V I ANHCPG S + LF G +L+ GDFR ++
Sbjct: 481 VLV--PDTG---GVTVTMIPANHCPG----SSLFLFEKSAAGRTQRILHCGDFRACPAHV 531
Query: 129 RAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSRE 166
R V A+ K +D+ YLD TY N Y+ P ++
Sbjct: 532 EHPKLRPETVDAVSGRTKQQKIDVCYLDTTYLNPRYSLPPQD 573
>gi|440468054|gb|ELQ37237.1| DNA cross-link repair protein SNM1 [Magnaporthe oryzae Y34]
gi|440489014|gb|ELQ68695.1| DNA cross-link repair protein SNM1 [Magnaporthe oryzae P131]
Length = 886
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 82/171 (47%), Gaps = 32/171 (18%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G YFL+H HSDH GL++ W GP++CS++T L + L + V+++ +
Sbjct: 420 QGCNAYFLSHFHSDHYIGLTANWTHGPIYCSKVTGSLIKSQ---LRTAAKYVVEL-EFEE 475
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
VV + G V V I ANHCPG S + LF G +L+ GDFR
Sbjct: 476 RFVVPGTEG----VVVTMIPANHCPG----SSLFLFEKTLGKGSSARAQRILHCGDFRAC 527
Query: 125 ASNERAEIGRNTLVKALKDDV--------VDILYLDNTYCNSSYAFPSREV 167
A I L+ + D + +DI YLD TY N Y+FP +EV
Sbjct: 528 P----AHIAHPQLMPEVIDSISGKIKKQKIDICYLDTTYLNPRYSFPPQEV 574
>gi|242058371|ref|XP_002458331.1| hypothetical protein SORBIDRAFT_03g031460 [Sorghum bicolor]
gi|241930306|gb|EES03451.1| hypothetical protein SORBIDRAFT_03g031460 [Sorghum bicolor]
Length = 539
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 79/157 (50%), Gaps = 29/157 (18%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFP--LKFPGLDLSLIRVLDIGSWHS 72
S YFL+H HSDH GL +W RG +FCS TA+L L P L+ LD+G +
Sbjct: 75 SVAYFLSHFHSDHYSGLGPSWRRGLVFCSAPTARLVSSVLSVPP---QLVVSLDVGVRIT 131
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC---LLYTGDFRWEASNER 129
+ S V A+DANHCPG +V LF ++TGDFR+ S R
Sbjct: 132 VDGWS----------VTAVDANHCPG----AVQFLFASPGPSAERYVHTGDFRYTESMTR 177
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
L++ ++ D V +LD TYCN + FPS+E
Sbjct: 178 ----DPNLLEFVRADAV---FLDTTYCNPKFTFPSQE 207
>gi|389642187|ref|XP_003718726.1| DNA cross-link repair protein SNM1 [Magnaporthe oryzae 70-15]
gi|351641279|gb|EHA49142.1| DNA cross-link repair protein SNM1 [Magnaporthe oryzae 70-15]
Length = 886
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 82/171 (47%), Gaps = 32/171 (18%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G YFL+H HSDH GL++ W GP++CS++T L + L + V+++ +
Sbjct: 420 QGCNAYFLSHFHSDHYIGLTANWTHGPIYCSKVTGSLIKSQ---LRTAAKYVVEL-EFEE 475
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
VV + G V V I ANHCPG S + LF G +L+ GDFR
Sbjct: 476 RFVVPGTEG----VVVTMIPANHCPG----SSLFLFEKTLGKGSSARAQRILHCGDFRAC 527
Query: 125 ASNERAEIGRNTLVKALKDDV--------VDILYLDNTYCNSSYAFPSREV 167
A I L+ + D + +DI YLD TY N Y+FP +EV
Sbjct: 528 P----AHIAHPQLMPEVIDSISGKIKKQKIDICYLDTTYLNPRYSFPPQEV 574
>gi|356518765|ref|XP_003528048.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
Length = 553
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 161/361 (44%), Gaps = 56/361 (15%)
Query: 1 MEKGL-ISVDRWTEGS--QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGL 57
M KGL SVD WT S + FLTH H DH+ ++S + P++ + LT + ++P L
Sbjct: 5 MPKGLPFSVDTWTPSSSKRHCFLTHAHKDHSSSITSH-SSYPIYSTNLTKTILLQQYPQL 63
Query: 58 DLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLY 117
D SL +++G S+ + P++ T V A DANHCPG +VM LF G FG +L+
Sbjct: 64 DASLFLNIELG--QSLVIHDPAAAPFT---VSAFDANHCPG----AVMFLFEGKFGNILH 114
Query: 118 TGDFRWEASN----ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ-- 171
TGD R +GR +D ++LD T+ N S PS+ A QQ
Sbjct: 115 TGDCRLTPECLLNLPDKYVGRKGKEPRCP---LDCVFLDCTFGNFSQGMPSKHSAIQQVI 171
Query: 172 --IWVWPERLQ---TMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIM 226
IW P+ T ++LG +I + + + + E+L P I
Sbjct: 172 NCIWKHPDAQTVYLTCNMLGQEEILVNVSETFGAKIYVDKAKYSECFENLALTVPEILCE 231
Query: 227 PSGLPWVV-------------KPLKGGGSL--------PGSLFSSYQSKWRATGGTQTEK 265
+ + K ++ +L P + + + + K+ T+ ++
Sbjct: 232 DPASRFHLFDGSRNLYERAKAKQVEAKETLQPEPLIVRPSAQWYACEEKFSDIDNTRKKR 291
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSS-SCYVDPLYYFG 324
+ EA+ D+F ++ V YS HS E+E L L+ P R +VS++ SC L Y
Sbjct: 292 MDEAVK--DQFG--VWHVCYSMHSSKEELEWTLQLLAP---RWVVSTTPSCRAMKLDYVK 344
Query: 325 R 325
+
Sbjct: 345 K 345
>gi|326430673|gb|EGD76243.1| hypothetical protein PTSG_11661 [Salpingoeca sp. ATCC 50818]
Length = 1437
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 28/160 (17%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
E ++FL+H H+DH L+ W GP++CS+ TAKL +D + +R L + +W
Sbjct: 25 ESGTLFFLSHFHADHYGKLNKDWQWGPVYCSQTTAKLVAAVLE-VDANYLRPLPLDTWVD 83
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF--RGDFGCL----LYTGDFRWEAS 126
++ V IDANHCPG + M LF R G L L++GD R+ +
Sbjct: 84 VTAT---------CRVALIDANHCPG----AAMFLFHVRETEGGLEHWYLHSGDCRYTPA 130
Query: 127 NERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
++ + +N +DIL+LD TYC+ + FP +E
Sbjct: 131 WKQHPLLQNV--------ALDILFLDTTYCDPKHTFPPQE 162
>gi|242077909|ref|XP_002443723.1| hypothetical protein SORBIDRAFT_07g000830 [Sorghum bicolor]
gi|241940073|gb|EES13218.1| hypothetical protein SORBIDRAFT_07g000830 [Sorghum bicolor]
Length = 699
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 96/199 (48%), Gaps = 28/199 (14%)
Query: 7 SVDRWTEGSQVY---FLTHLHSDHTQGLSSAWARG----PLFCSRLTAKLFPLKFPGLDL 59
+VD WT S + FLTH H DH G+++ A P++ SRLT + FP LD
Sbjct: 12 AVDTWTPASSLKRHRFLTHAHRDHLVGIAATSAVSASSSPIYASRLTILIALRIFPQLDR 71
Query: 60 SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTG 119
+ LD+G + V P G+ T V A+DANHCPG +VM LF G FG +L+TG
Sbjct: 72 AAFVELDVGD-PPLRVPDPD-GDFT---VTALDANHCPG----AVMFLFEGPFGAVLHTG 122
Query: 120 DFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI--WVW-- 175
D R A + L +D L+LD T+ + FP++E + +Q+ VW
Sbjct: 123 DCRLTPDCLTALTPPH-----LARGRIDYLFLDCTFARCALRFPTKEDSIRQVINCVWKH 177
Query: 176 ---PERLQTMHLLGFHDIF 191
P +LG D+
Sbjct: 178 PSAPAVYLVCDMLGQEDVL 196
>gi|299117631|emb|CBN75473.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 711
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 109/228 (47%), Gaps = 41/228 (17%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
Y LTH HSDHT GL +++ G ++CS TA L ++ G++ + L + + ++
Sbjct: 31 YLLTHFHSDHTTGLYKSFSAGKIYCSHGTANLI-VELMGVNRERVVALPMDTPVLVA--- 86
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG---CLLYTGDFRWEASNERAEIGR 134
++ IDANHCP +VM + R L+TGDFR S + R
Sbjct: 87 -------GFDLTLIDANHCP----AAVMFVIRDPRPGGRTTLHTGDFRAAES-----VCR 130
Query: 135 NTLVKALKDDVVDILYLDNTYCNSSYAFPSR-EVAAQQIWVWPERLQ----TMHLLGFHD 189
N +VK+LK +D LYLD TYC + FP + EV AQ + LQ T+ L+G +
Sbjct: 131 NPVVKSLK-GRLDSLYLDTTYCGPRHTFPDQSEVLAQATQLVRMELQRDPNTLFLVGTYS 189
Query: 190 IFTTKTSLTRVRAVPRYSFSIDTL-ESLNTMHP-------TIGIMPSG 229
I K + AV + + S TL E+L +G+ P+G
Sbjct: 190 IGKEKV----LEAVAKDTNSPATLREALTKARAGGAPFTSVVGVRPTG 233
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 280 IYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
+YS+PYS+HS FT++++F+ V+P I V++ S
Sbjct: 377 VYSLPYSEHSSFTQLKDFVRTVRPKKIVPTVNAVS 411
>gi|380496304|emb|CCF31810.1| DNA repair metallo-beta-lactamase [Colletotrichum higginsianum]
Length = 858
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 32/169 (18%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G YFL+H HSDH GL++ W GP++CS++T L ++ + +R L+
Sbjct: 433 KGCNAYFLSHFHSDHYIGLTANWTHGPIYCSKVTGDLVKMQL-RVAAHWVRPLEFDE--- 488
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+V P + V V I ANHCPG S + LF G +L+ GDFR
Sbjct: 489 -TVKVPGT---EGVTVTMISANHCPG----SSLFLFEKSIGKGNSAKKQRILHCGDFRAC 540
Query: 125 ASNERAEIGRNTLVKALKDDV--------VDILYLDNTYCNSSYAFPSR 165
A++G L ++D + +D+ YLD TY N Y+FP +
Sbjct: 541 P----AQVGHPLLKPEVQDSISGKTKQQKIDVCYLDTTYLNPRYSFPPQ 585
>gi|390360524|ref|XP_796713.3| PREDICTED: DNA cross-link repair 1A protein-like
[Strongylocentrotus purpuratus]
Length = 602
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 143/325 (44%), Gaps = 49/325 (15%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G + YFL+H H DH GL+ + + L+CS++T L +I L++ + +
Sbjct: 266 GCKAYFLSHFHYDHYGGLTKHFDQQ-LYCSKVTGNL-----------VISRLNVAAEYVK 313
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRWEASNERAEI 132
+ + VEV ++ANHCPG +VM L++ G + L+TGDFR +A E
Sbjct: 314 ILPMNEPCKVDGVEVTLLEANHCPG----AVMFLYKLKSGVIYLHTGDFRADAEME---- 365
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR--------EVAAQQIWVWPERL--QTM 182
L L V+ LYLD TYC+ Y FPS+ ++A Q + + L
Sbjct: 366 ----LYPQLSSCHVNQLYLDTTYCDPQYKFPSQTEVIEFAVKIAVQAVKSNKKTLIVCAT 421
Query: 183 HLLGFHDIF--TTKTSLTRVRAVPRYSFSIDTLESLNTMHPTI---GIMPSGLPWVVKPL 237
+ +G +F + +V R ++ LE + M GL + +
Sbjct: 422 YTIGKEKVFRAIAEALECKVYVDSRKLKVLECLEDDDLMSLLTRDNKTSACGLHVIAMNM 481
Query: 238 KGGGSLPGSLFSSYQSKW------RATGGTQTEKLKEA--LGSVDRFHKYIYSVPYSDHS 289
L L S + S++ + TG T ++K++ + IY +PYS+HS
Sbjct: 482 LNHQKLKEYL-SQFSSRYDNILAFKPTGWTHSDKVESPSDIKPSKSGKSTIYGIPYSEHS 540
Query: 290 CFTEIEEFLNLVQPSNIRGIVSSSS 314
++E++ F+ + I V++ +
Sbjct: 541 SYSEMKRFVQFISADKILPTVNNGN 565
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 25/153 (16%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G + YFL+H H DH GL+ + + L+CS++T L + + +++L + +
Sbjct: 18 GCKAYFLSHFHYDHYGGLTKHFDQQ-LYCSKVTGNLVITRI-KVAAEYVKILPMNT---- 71
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRWEASNERAEI 132
P + VEV ++ANHCPG +VM L++ G + L+TGDFR +A E
Sbjct: 72 ----PCKVDG--VEVTLLEANHCPG----AVMFLYKLKSGVIYLHTGDFRADAEME---- 117
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
L L V+ LYLD TYC+ Y FPS+
Sbjct: 118 ----LYPQLSSCHVNQLYLDTTYCDPQYKFPSQ 146
>gi|21357063|ref|NP_649548.1| Snm1 [Drosophila melanogaster]
gi|7296732|gb|AAF52011.1| Snm1 [Drosophila melanogaster]
gi|16198055|gb|AAL13814.1| LD28027p [Drosophila melanogaster]
gi|220945898|gb|ACL85492.1| Snm1-PA [synthetic construct]
gi|220955582|gb|ACL90334.1| Snm1-PA [synthetic construct]
Length = 763
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH H+DH GL+ + PL+ S ++A+L F LD + I +D+
Sbjct: 286 EGVTHYFLTHFHADHYIGLTKKFCH-PLYVSPISARLV-RTFIKLDETHIHEIDVDQTLD 343
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
+ V+V A++ANHCPG L M F+ G C+L+TGDFR A E
Sbjct: 344 VD----------GVQVTALEANHCPGAL----MFFFKLSSGECILHTGDFRASADMESLP 389
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAF 162
I N +D+LYLD TY N +Y F
Sbjct: 390 IFWN-------HSNIDLLYLDTTYMNKNYDF 413
>gi|348508875|ref|XP_003441978.1| PREDICTED: DNA cross-link repair 1A protein-like [Oreochromis
niloticus]
Length = 931
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 76/154 (49%), Gaps = 23/154 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GL+ + P++C+R+T L K + + +L + + +
Sbjct: 611 EGITAYFLTHFHSDHYGGLTKT-STVPIYCNRITGNLVKSKL-RVAEQYVHILPMNTEVT 668
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
+ V VI +DANHCP G +++L F D +L+TGDFR + S E
Sbjct: 669 VE----------GVRVILLDANHCP---GAAMLLFFLPDGQTVLHTGDFRADPSME---- 711
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
L V LYLD TYC+ Y FP ++
Sbjct: 712 ----TCPELLSCRVQTLYLDTTYCSPEYTFPRQQ 741
>gi|167515482|ref|XP_001742082.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778706|gb|EDQ92320.1| predicted protein [Monosiga brevicollis MX1]
Length = 194
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 29/163 (17%)
Query: 8 VDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIR 63
VD +T G+ YFL+H H DH GL++ + GPL+CS +TA+L + G+ IR
Sbjct: 5 VDAFTYGAVPQCTAYFLSHFHYDHYGGLTARFDWGPLYCSAITARLVQSQI-GVKPEHIR 63
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
+++ G+ + I G + V ++A+HCPG +V+L+F + +L+TGDFR
Sbjct: 64 IINPGNTYQI------EGHR----VTVLEADHCPG----AVLLIFNVNGRNVLHTGDFR- 108
Query: 124 EASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
++++L+ + ++LD TYCN Y FP E
Sbjct: 109 ---------ATEQVLQSLQSFSIHTVHLDTTYCNEKYCFPRIE 142
>gi|20161430|dbj|BAB90354.1| DNA ligase-like [Oryza sativa Japonica Group]
gi|21952820|dbj|BAC06236.1| DNA ligase-like [Oryza sativa Japonica Group]
gi|125572866|gb|EAZ14381.1| hypothetical protein OsJ_04301 [Oryza sativa Japonica Group]
Length = 698
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 151/353 (42%), Gaps = 51/353 (14%)
Query: 7 SVDRWTEGSQVY---FLTHLHSDHT----QGLSSAWARGPLFCSRLTAKLFPLKFPGLDL 59
+VD W S+ FLTH H DH S G ++ +RLT L FP L+
Sbjct: 12 AVDTWGPSSRRRRHRFLTHAHRDHLVAAGGAADSGECPGAVYATRLTLDLALRHFPRLER 71
Query: 60 SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTG 119
+++G ++ V P+ V A DANHCPG +VM LF G FG +L+TG
Sbjct: 72 GEFVEMEVGK--TVVVDDPAGA----FSVTAYDANHCPG----AVMFLFEGQFGSILHTG 121
Query: 120 DFRWEASNERAEIGRNTLVKALKDDV--VDILYLDNTYCNSSYAFPSREVAAQQ----IW 173
D R + + + K K+++ +D ++LD T+ PS+E A QQ IW
Sbjct: 122 DCRL-TPDCVHNLPLKYIAKKGKENICRLDFVFLDCTFSKCFLKLPSKESAIQQVIACIW 180
Query: 174 VWPER---LQTMHLLGFHDIF--TTKTSLTRVRAVPRYSFSIDTLESLNTMHPTI----- 223
P LLG +I ++T +++ R + D +L+ + P I
Sbjct: 181 KHPHAPFVYLACDLLGHEEILIEVSRTFGSKIYVDKRRNS--DCFRALSLIAPEIITEDP 238
Query: 224 -------GIMPSGLPWVVKPLKGGGSL-PGSLFSSYQSKWRA-TGGTQTEKLKEALGSVD 274
G K + SL P LF ++W A +Q L EA+ +D
Sbjct: 239 SCRFQILGFQNLYDKACTKIEEARASLQPEPLFIRPSTQWYAHCAQSQKPSLTEAV--LD 296
Query: 275 RFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
++ + +S HS E+E+ L L+QP + I ++ C+ L Y + C
Sbjct: 297 GCG--VWHICFSIHSSRDELEQALELLQPQWV--ISTTPPCFAMELSYVKKKC 345
>gi|195568456|ref|XP_002102232.1| GD19792 [Drosophila simulans]
gi|194198159|gb|EDX11735.1| GD19792 [Drosophila simulans]
Length = 768
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 75/151 (49%), Gaps = 24/151 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH H+DH GL+ + PL+ S TA+L F LD + I +D+
Sbjct: 291 EGVTHYFLTHFHADHYIGLTKKFCH-PLYVSPTTARLV-RTFIKLDETHIHEIDVDQTLD 348
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
+ V+V A++ANHCPG L M F+ G C+L+TGDFR A E
Sbjct: 349 VD----------GVQVTALEANHCPGAL----MFFFKLSSGECILHTGDFRASADMESLP 394
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAF 162
I N +D+LYLD TY N +Y F
Sbjct: 395 IFWN-------HSNIDLLYLDTTYMNKNYDF 418
>gi|356567248|ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
Length = 1402
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 76/159 (47%), Gaps = 29/159 (18%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSIS 74
S YFL+H HSDH GLS +W+RG +FCS TA L L R+L I + +
Sbjct: 59 SHSYFLSHFHSDHYSGLSPSWSRGVIFCSHTTAAL-----------LRRILHIPAAFIVP 107
Query: 75 VVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-----GDFGCLLY--TGDFRWEASN 127
+ V +DANHCPG +V LF D L Y TGDFR+ ++
Sbjct: 108 LPLRQPLRIDGAHVTLLDANHCPG----AVQFLFSVPRATADAAALRYVHTGDFRF-CNS 162
Query: 128 ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
+E V A D ++LD TYCN + FPS+E
Sbjct: 163 MVSEPALAPFVGA------DAVFLDTTYCNPKFVFPSQE 195
>gi|407404385|gb|EKF29862.1| hypothetical protein MOQ_006337 [Trypanosoma cruzi marinkellei]
Length = 694
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 35/185 (18%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
++FL+H HSDH G++ W G ++ SR TA + + G+ S ++ +D ++ S+
Sbjct: 48 LFFLSHFHSDHYNGITEGWNHGIIYASRGTANILCWRL-GIPDSRVKRMDFCVTYTFSLK 106
Query: 77 SPSSGEKT------------FVEVIAIDANHCPGILGCSVMLLFRGD-FGCLLYTGDFRW 123
+ + +T F V + A HCPG SVM LFR FG +L+TGDFR+
Sbjct: 107 NGALLYETAWNEEDWRCSDDFFSVTLVPAGHCPG----SVMFLFRSPVFGTVLHTGDFRF 162
Query: 124 EAS----------------NERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
+ ++ N ++ ++ VD+L+LDNT+C+ + FPSR
Sbjct: 163 TQEQPTSCLLPHVPRMPKFQKEIDMTTNPILNSVAGK-VDVLFLDNTFCDERFNFPSRAD 221
Query: 168 AAQQI 172
+ +++
Sbjct: 222 SLREV 226
>gi|403215975|emb|CCK70473.1| hypothetical protein KNAG_0E02110 [Kazachstania naganishii CBS
8797]
Length = 557
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 120/369 (32%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFL+H HSDH QGL +W G ++CS +TA+L KF L+ +L+
Sbjct: 190 YFLSHFHSDHYQGLKKSWGNGEVYCSYITAQLLCQKF-NFPRELVHILN----------- 237
Query: 78 PSSGEKTFVE----VIAIDANHCPGILGCSVMLLFRGDFGC------LLYTGDFRWEASN 127
+GE+T V V+ +DANHCPG + + LF+ G +++TGDFR
Sbjct: 238 --NGERTMVHDRISVVPLDANHCPG----AQIFLFQEHDGAGRIVKQIIHTGDFR----- 286
Query: 128 ERAEIGRNTLVKALK------DDVVDILYLDNTYCNSSYAFPSREVA------------- 168
+ +V L+ + V+D +YLD TY ++ P+++
Sbjct: 287 -----ATDAMVVELEKFLPSSNSVIDEIYLDTTYMKPNHTHPTQQTVVDVTSSFVTEDWY 341
Query: 169 -----------AQQIWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLN 217
A+ PER + M L+G + I K +L R + S + L
Sbjct: 342 SKKRPRTVMDFARATPAAPER-RKMVLVGSYVIGKEKLALEIARRLDT-SVHVQNKNKLR 399
Query: 218 TM----------HPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWR--------ATG 259
+ H + ++P G+ L+ ++ L + W TG
Sbjct: 400 QIVLDGQMGDAEHSQVHMVPLGI------LRDDAAISTYLREECRVNWLNVDVIGVVPTG 453
Query: 260 -------------GTQTEKLKEALGSVDRFHK-------------YIYSVPYSDHSCFTE 293
G + E +K A+ F K IY VPYS+HS F E
Sbjct: 454 WTFGNRYSTSVEIGNKCEYVKGAVTFESTFDKSWFSGQETPYRKFQIYKVPYSEHSNFVE 513
Query: 294 IEEFLNLVQ 302
+ FL +Q
Sbjct: 514 LLRFLCALQ 522
>gi|195391946|ref|XP_002054620.1| GJ24554 [Drosophila virilis]
gi|194152706|gb|EDW68140.1| GJ24554 [Drosophila virilis]
Length = 654
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 128/319 (40%), Gaps = 60/319 (18%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFL+H H DH GL+ +A PL+ S +TA+L P +D H I+V
Sbjct: 263 YFLSHYHGDHYVGLTRKFAH-PLYMSPITARLVRTFIP---------IDSQYLHEIAV-- 310
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
S +EV AIDANHCPG ++ML+F+ G C+L+TGDFR E I N
Sbjct: 311 DQSITLNDIEVTAIDANHCPG----AIMLIFKFSTGKCILHTGDFRASFEMESLPIFWN- 365
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL-------QTMHLLGFHD 189
+D+LYLD TY + +Y F + + ++ + + +H+ G +
Sbjct: 366 ------QPNIDLLYLDTTYLSQNYDFCHQSDSIYRVCSLVRQFHEKHASKRILHVCGSYL 419
Query: 190 IFTTKTSLT-------RVRAVPRYSFSIDTLESLNTMHP-----------TIGIMPSGLP 231
I K L RV P +ID L+ H I + P
Sbjct: 420 IGKEKVWLALVEEFRLRVWTEPNRRKAIDCLDWPELKHSLCDDPFEANLHVINMGKISYP 479
Query: 232 WVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCF 291
+ + K L S W K +G V YS+HS +
Sbjct: 480 QLDQYFKQFEGHYDMLLGIRPSGWEKNSKPSYGKRISVIG-----------VEYSEHSSY 528
Query: 292 TEIEEFLNLVQPSNIRGIV 310
E+E F+ ++P N+ V
Sbjct: 529 KELERFVRFLKPKNVISTV 547
>gi|334183682|ref|NP_176845.2| DNA ligase 6 [Arabidopsis thaliana]
gi|332196428|gb|AEE34549.1| DNA ligase 6 [Arabidopsis thaliana]
Length = 1396
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 27/157 (17%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSIS 74
S +FL+H HSDH GLSS+W++G ++CS TA+L + +L + S +
Sbjct: 78 SVAFFLSHFHSDHYSGLSSSWSKGIIYCSHKTARL-----------VAEILQVPSQFVFA 126
Query: 75 VVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-----GDFGCLLYTGDFRWEASNER 129
+ + EV+ I+ANHCPG +V LF+ F ++TGDFR+ R
Sbjct: 127 LPMNQMVKIDGSEVVLIEANHCPG----AVQFLFKVKLESSGFEKYVHTGDFRF-CDEMR 181
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
+ N V D ++LD TYCN + FPS+E
Sbjct: 182 FDPFLNGFVGC------DGVFLDTTYCNPKFVFPSQE 212
>gi|12597768|gb|AAG60081.1|AC013288_15 DNA ligase I, putative [Arabidopsis thaliana]
Length = 1417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 27/157 (17%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSIS 74
S +FL+H HSDH GLSS+W++G ++CS TA+L + +L + S +
Sbjct: 78 SVAFFLSHFHSDHYSGLSSSWSKGIIYCSHKTARL-----------VAEILQVPSQFVFA 126
Query: 75 VVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-----GDFGCLLYTGDFRWEASNER 129
+ + EV+ I+ANHCPG +V LF+ F ++TGDFR+ R
Sbjct: 127 LPMNQMVKIDGSEVVLIEANHCPG----AVQFLFKVKLESSGFEKYVHTGDFRF-CDEMR 181
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
+ N V D ++LD TYCN + FPS+E
Sbjct: 182 FDPFLNGFVGC------DGVFLDTTYCNPKFVFPSQE 212
>gi|413921528|gb|AFW61460.1| hypothetical protein ZEAMMB73_267019 [Zea mays]
Length = 653
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 150/369 (40%), Gaps = 64/369 (17%)
Query: 1 MEKGL-ISVDRWTEGSQVY---FLTHLHSDHTQGLSSAWARG----PLFCSRLTAKLFPL 52
M +GL +VD WT S + FLTH H DH G+++ A P++ SRLT +
Sbjct: 5 MPRGLPFAVDTWTPASALKRHRFLTHAHRDHLAGITATSAVSASSSPVYASRLTILIALR 64
Query: 53 KFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
FP LD + LD+G + V P G+ T V A+DANHCPG +VM LF G F
Sbjct: 65 IFPQLDRAAFVELDVGQ-PPLRVPDPD-GDFT---VTAVDANHCPG----AVMFLFEGPF 115
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKALKDDV---VDILYLDNTYCNSSYAFPSREVAA 169
G +L+TGD R + AL + +D L+LD T+ S FP+ + +
Sbjct: 116 GDVLHTGDCRLTPD----------CLSALTSHLARRIDYLFLDCTFARCSLRFPATQDSI 165
Query: 170 QQI--WVW-----PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPT 222
+Q+ VW P +LG D+ + + + D + L + P
Sbjct: 166 RQVIDCVWKHPSAPVVYLVCDMLGQEDVLVEVSKAFGSKIYVDREKNSDCHQRLAHVAPE 225
Query: 223 IGIMPSGLP---WVVKPLK-------------GGGSLPGSLFSSYQSKWRA--------T 258
I P + V P P L S+W A
Sbjct: 226 ILAADDAAPSTRFHVLPFPRLSERATEILAQARAARQPEPLIIRPSSQWYAYYDPPPPEE 285
Query: 259 GGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVD 318
TQ ++ K L R ++ V S HS E+E+ L +++P + + ++ C
Sbjct: 286 ASTQQQQ-KPVLTEAMRDEFGVWHVCLSMHSSREELEQALGILKPKWV--VSTTPPCMAV 342
Query: 319 PLYYFGRLC 327
L Y + C
Sbjct: 343 DLSYVRKHC 351
>gi|8778278|gb|AAF79287.1|AC068602_10 F14D16.17 [Arabidopsis thaliana]
Length = 612
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 148/347 (42%), Gaps = 53/347 (15%)
Query: 18 YFLTHLHSDHTQGLS-SAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
+FLTH H DHT G+S S P++ + LT L +FP LD S ++IG S+ V
Sbjct: 92 HFLTHAHKDHTVGVSPSNIVVFPIYSTSLTISLLLQRFPQLDESYFVRVEIG--QSVIVD 149
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA----SNERAEI 132
P GE +V A DANHCPG +VM LF G FG +L+TGD R S +
Sbjct: 150 DPD-GE---FKVTAFDANHCPG----AVMFLFEGSFGNILHTGDCRLTLDCLHSLPEKYV 201
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYA--FPSREVAAQQI--WVW-----PERLQTMH 183
GR+ +K + ++LD T+ SS++ FP++ A +QI +W P
Sbjct: 202 GRSHGMKPKCS--LGYIFLDCTFGKSSHSQRFPTKHSAIRQIINCIWNHPDAPVVYLACD 259
Query: 184 LLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGI--------MPSGLPWVVK 235
+LG D+ + + + +++ SL + P I + SG P + +
Sbjct: 260 MLGQEDVLLEVSRTFGSKIYVDKATNLECFRSLMVIVPEIVSEDPSSRFHIFSGFPKLYE 319
Query: 236 PLKGGGSLPGSLFSSY---------------QSKWRATGGTQTEKLKEALGSVDRFHKYI 280
+ S S + W++ + K++ + D F +
Sbjct: 320 RTSAKLAEARSKLQSEPLIIRPSAQWYVCDDEDDWKSGSIQKQRKVRFSEAVKDEFG--L 377
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
+ V YS HS E+E + L+ P + V SC L Y + C
Sbjct: 378 WHVCYSMHSSRAELESAMQLLSPKWVVSTV--PSCRAMELNYVKKNC 422
>gi|357115401|ref|XP_003559477.1| PREDICTED: uncharacterized protein LOC100844720 [Brachypodium
distachyon]
Length = 662
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 152/360 (42%), Gaps = 46/360 (12%)
Query: 1 MEKGL-ISVDRWTEGSQVY---FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
+ +GL I+VD WT S + FLTH H DH G+++ + ++ SRLT + FP
Sbjct: 5 LPRGLPIAVDTWTPASALKRHRFLTHAHRDHLTGVTTTSSGAAVYASRLTILIVRHIFPQ 64
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
L + +++G + +V G+ T V A DANHCPG +VM LF G FG +L
Sbjct: 65 LGPDVFVEMELG---TPVLVQDPKGDFT---VTAFDANHCPG----AVMFLFEGTFGNVL 114
Query: 117 YTGDFRWEASNERAEIGRNTLVKALKDDVV------DILYLDNTYCNSSYAFPSREVAAQ 170
+TGD R + R K V D L+LD T+ FP++E + +
Sbjct: 115 HTGDCRLTPDCIQGLPLRYINAKGSGSSQVPPSCRIDYLFLDCTFARCPLRFPTKEASIR 174
Query: 171 QI--WVW-----PERLQTMHLLGFHDI-------FTTKTSLTRVRAVPRYS----FSIDT 212
Q+ +W P +LG +I F +K + + + Y F+ +
Sbjct: 175 QVINCIWEHPNAPTVYLVSDMLGQEEILIEVSRAFGSKIYVDKDKNSECYHTLSLFAPEI 234
Query: 213 LESLNTMHPTIGIMPSGLPWVVK--PLKGGGSLPGSLFSSYQSKWRATGGTQTEKL---K 267
+ + P W V+ L P L S+W A Q+E L K
Sbjct: 235 VTQDAASRFQVIAFPRLSEWAVEMLTLARAKQQPEPLIIRSSSQWYA-HYEQSESLPKQK 293
Query: 268 EALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
+L R ++ V S HS E+++ + L+QP + + ++ C L Y + C
Sbjct: 294 LSLTEPMRDGFGVWHVCLSMHSSREELDQAVELLQPKWV--VSTTPPCLAMDLAYVKKHC 351
>gi|389745539|gb|EIM86720.1| DRMBL-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 515
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 78/171 (45%), Gaps = 39/171 (22%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G YFLTH HSDH LSS W GP++CS TA L + +D + L +
Sbjct: 90 GVTAYFLTHAHSDHYTNLSSNWKAGPIYCSEGTANLI-IHMLSVDRKWVHPLPMDK---- 144
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG----DFGC--------------- 114
V P++G V V I+ANHCPG S + LF G D G
Sbjct: 145 PTVIPNTGG---VTVTLIEANHCPG----SSLFLFEGKQTIDAGDSTFKSPFVGSSKMFR 197
Query: 115 LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
L+ GDFR ++ L A+K +DI+YLD TY N Y FPS+
Sbjct: 198 YLHCGDFRASP--------QHVLHPAVKGKHLDIIYLDTTYLNPKYCFPSQ 240
>gi|158290010|ref|XP_311587.4| AGAP010353-PA [Anopheles gambiae str. PEST]
gi|157018434|gb|EAA07248.4| AGAP010353-PA [Anopheles gambiae str. PEST]
Length = 689
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 25/154 (16%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH H+DH GL +++ PL S +TA+L F + +++++ H
Sbjct: 292 EGVTHYFLTHFHADHYIGLKKTFSK-PLIMSSITARLVKA-FINVAEEFYQIVEL---HQ 346
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
V+ VE+IA+DANHCPG +M LFR G +L+TGDFR AS E E
Sbjct: 347 SIVIDD-------VEIIALDANHCPG----GIMFLFRLPNGSNVLHTGDFR--ASPEMEE 393
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
+ +DI+YLD TY +S YAF S+
Sbjct: 394 YPE------FWNFQIDIIYLDTTYLSSKYAFKSQ 421
>gi|406702005|gb|EKD05076.1| hypothetical protein A1Q2_00620 [Trichosporon asahii var. asahii
CBS 8904]
Length = 988
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 86/188 (45%), Gaps = 49/188 (26%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD + G+ YFLTH H+DH LS AW GP++CS TA L LK G++
Sbjct: 266 IAVDAFCYGAVPKVTAYFLTHAHADHYTALSKAWRHGPIYCSETTANLIVLKL-GVERHW 324
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG----DFGCL-- 115
+ + V P++G V V ++DANHCPG S + LF G D G
Sbjct: 325 V----------VPFVIPNTG---GVTVTSLDANHCPG----SNVFLFEGRQTVDAGDTTF 367
Query: 116 -------------LYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAF 162
L+ GDFR ++ L A+ +D +YLD TY N SY F
Sbjct: 368 KSPMVGSNRIFRYLHCGDFRASP--------KHVLHPAVACKPLDTIYLDTTYLNPSYCF 419
Query: 163 PSREVAAQ 170
P + + +
Sbjct: 420 PPQPLVIE 427
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 15/135 (11%)
Query: 171 QIWVWPERLQTMHLLG---FHDIFTTKTSLTRVRAVPRYSFSIDTLES-LNTMHP----T 222
+I+ P + Q + HD+ T ++ VP + ++D LE L TMHP
Sbjct: 634 KIYCNPRKTQILKCEDDPELHDLMGTDPIECQIHLVPLSNITLDNLEEYLATMHPHFNRI 693
Query: 223 IGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYS 282
+ P+G W SLP F + + R G LK GS ++ ++
Sbjct: 694 LAFRPTG--WTFSGPSAANSLPDVNFIIKRDQAR---GFSDVSLKPIRGSCRKY--MMFG 746
Query: 283 VPYSDHSCFTEIEEF 297
VPYS+HS F E+ F
Sbjct: 747 VPYSEHSSFFELTCF 761
>gi|297844862|ref|XP_002890312.1| hypothetical protein ARALYDRAFT_472127 [Arabidopsis lyrata subsp.
lyrata]
gi|297336154|gb|EFH66571.1| hypothetical protein ARALYDRAFT_472127 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 143/347 (41%), Gaps = 53/347 (15%)
Query: 18 YFLTHLHSDHTQGLS-SAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
+FLTH H DHT G+S S P++ + LT L + P LD S ++IG S+ V
Sbjct: 29 HFLTHAHKDHTVGISPSNIVVFPIYSTSLTISLLIQRHPQLDESFFVRIEIG--QSVIVD 86
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE----ASNERAEI 132
P K V A DANHCPG +VM LF G FG +L+TGD R S +
Sbjct: 87 DPDGQFK----VTAFDANHCPG----AVMFLFEGSFGNILHTGDCRLTLDCLQSLPEKYV 138
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYA--FPSREVAAQQ----IWVWPER---LQTMH 183
GR V +D ++LD T+ SS++ FPS+ A +Q IW P+
Sbjct: 139 GRRHGVAP--KCCLDYIFLDCTFGKSSHSQRFPSKHSAIRQVINCIWNHPDAPVVYLACD 196
Query: 184 LLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGI--------MPSGLPWVVK 235
+LG D+ + + + +++ SL + P I + SG P + +
Sbjct: 197 MLGQEDVLLEVSRTFGSKIYVDKATNLECFRSLMVIVPEIVSEDPSSRFHIFSGFPKLYE 256
Query: 236 PLKGGGSLPGSLFSSY---------------QSKWRATGGTQTEKLKEALGSVDRFHKYI 280
+ S S + W + + K++ + D F +
Sbjct: 257 RTSAKLAEARSKLQSEPLIIRPSAQWYVCDDEDDWESGSIQKQRKVRFSEAVKDEFG--L 314
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
+ V YS HS E+E + L+ P + V SC L Y + C
Sbjct: 315 WHVCYSMHSSREELESAMQLLSPKWVVSTV--PSCRAMELNYVKKNC 359
>gi|358374994|dbj|GAA91581.1| DNA repair protein Pso2/Snm1 [Aspergillus kawachii IFO 4308]
Length = 836
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 80/167 (47%), Gaps = 26/167 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+ +W GP++CSR TA L + +D + L+
Sbjct: 421 EGCNAYFLSHFHSDHYVGLTGSWRHGPIYCSRPTANLVCQQL-KVDRKWLVPLEFEQKTE 479
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRW- 123
I P +G +V I+ANHCPG S + LF G +L+ GDFR
Sbjct: 480 I----PGTG---GAQVTLIEANHCPG----SAIFLFEKLMGSGPSQRTHRVLHCGDFRAS 528
Query: 124 ----EASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
+ + R EI KA + +D YLD TY + YAFP +E
Sbjct: 529 PLHVQHALLRPEITDPATGKA-RQQRIDACYLDTTYLSPKYAFPGQE 574
>gi|409081319|gb|EKM81678.1| hypothetical protein AGABI1DRAFT_70037 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 456
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 79/167 (47%), Gaps = 27/167 (16%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G YFL+H HSDH LSS+W GP++CS +TA L + +D IR L + +
Sbjct: 56 GVTAYFLSHAHSDHYTNLSSSWKSGPIYCSEVTANLI-IYMLSVDKKWIRPLPMDT---- 110
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD------------- 120
+ P +G V+V I+ANHCPG S + LF G + GD
Sbjct: 111 PTIIPDTGG---VQVTLIEANHCPG----SCLFLFEGH--QTVNAGDSTFRSTFVGSSRM 161
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
FR+ + R+ + A+ +D +YLD TY N Y FP + +
Sbjct: 162 FRYLHCGDFRASPRHIMHPAMAGKKIDCVYLDTTYLNPRYTFPPQPL 208
>gi|21554701|gb|AAM63664.1| unknown [Arabidopsis thaliana]
Length = 545
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 148/347 (42%), Gaps = 53/347 (15%)
Query: 18 YFLTHLHSDHTQGLS-SAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
+FLTH H DHT G+S S P++ + LT L +FP LD S ++IG S+ V
Sbjct: 25 HFLTHAHKDHTVGVSPSNIVVFPIYSTSLTISLLLQRFPQLDESYFVRVEIG--QSVIVD 82
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA----SNERAEI 132
P GE +V A DANHCPG +VM LF G FG +L+TGD R S +
Sbjct: 83 DPD-GE---FKVTAFDANHCPG----AVMFLFEGSFGNILHTGDCRLTLDCLHSLPEKYV 134
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYA--FPSREVAAQQI--WVW-----PERLQTMH 183
GR+ +K + ++LD T+ SS++ FP++ A +QI +W P
Sbjct: 135 GRSHGMKPKCS--LGYIFLDCTFGKSSHSQRFPTKHSAIRQIINCIWNHPDAPVVYLACD 192
Query: 184 LLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGI--------MPSGLPWVVK 235
+LG D+ + + + +++ SL + P I + SG P + +
Sbjct: 193 MLGQEDVLLEVSRTFGSKIYVDKATNLECFRSLMVIVPEIVSEDPSSKFHIFSGFPKLYE 252
Query: 236 PLKGGGSLPGSLFSSY---------------QSKWRATGGTQTEKLKEALGSVDRFHKYI 280
+ S S + W++ + K++ + D F +
Sbjct: 253 RTSAKLAEARSKLQSEPLIIRPSAQWYVCDDEDDWKSGSIQKQRKVRFSEAVKDEFG--L 310
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
+ V YS HS E+E + L+ P + V SC L Y + C
Sbjct: 311 WHVCYSMHSSRAELESAMQLLSPKWVVSTV--PSCRAMELNYVKKNC 355
>gi|259483913|tpe|CBF79690.1| TPA: interstrand crosslink repair protein (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 832
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
ISVD + E YFL+H HSDH GLS +W GP++CSR TA L + +D
Sbjct: 404 ISVDAFRYGAVESCNAYFLSHFHSDHYIGLSKSWRHGPIYCSRATANLVRQQL-KVDPKW 462
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------- 114
+ LD + P +G V+V I+ANHCPG S + LF
Sbjct: 463 VVDLDFEKKTEV----PGTG---GVQVTMIEANHCPG----SAIFLFEKAVSSGASTRIQ 511
Query: 115 -LLYTGDFRWEASNERAEIGRNTLVKALK----DDVVDILYLDNTYCNSSYAFP 163
+L+ GDFR + + + R +V +D YLD TY + YAFP
Sbjct: 512 RVLHCGDFRASPQHVQHALLRPDVVDPKTGKRWQQRIDACYLDTTYLSPKYAFP 565
>gi|308809469|ref|XP_003082044.1| Predicted hydrolase involved in interstrand cross-link repair (ISS)
[Ostreococcus tauri]
gi|116060511|emb|CAL55847.1| Predicted hydrolase involved in interstrand cross-link repair (ISS)
[Ostreococcus tauri]
Length = 607
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 143/354 (40%), Gaps = 76/354 (21%)
Query: 20 LTHLHSDHTQGLSSAWA-----------------------RGP-LFCSRLTAKLFPLKFP 55
LTH H+DH GL+S++ R P ++CS++TA+L ++
Sbjct: 36 LTHFHADHYCGLTSSYGRAETTTRATTTGDGVDASSAIDGRAPKIYCSKITARLV-IEVL 94
Query: 56 GLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL 115
G+ S + L++G + T +EV IDANHCPG C V L
Sbjct: 95 GVRASRVEALEVGETTILG--------DTEIEVTFIDANHCPG--ACLVFFRNVRTNETL 144
Query: 116 LYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVW 175
L+TGDFR A R ++ + D D ++LD TYC + FP ++V + +
Sbjct: 145 LHTGDFR-AARRVREDVHLARCLARCVDGGPDEVHLDTTYCEKKWTFPDQDVVLEAMRKI 203
Query: 176 PERL-----QTMHLLGFHDIFTTKT-------SLTRVRAVPRYSFSI-------DTLESL 216
E +T+ L G + + + + TR R S+ D L
Sbjct: 204 AEEESKREPRTLFLCGSYSVGKERAIRAVCQGARTRASVTSRRKRSLVLSEWWRDDLFVC 263
Query: 217 NTMHPTIG----IMPSGL------PWVVKPLKGGGSLPGSLFS------SYQSKWRATGG 260
+P + GL ++ +K G++ + SY+ G
Sbjct: 264 EDDNPEEAARCRVRVCGLGKGSNHRAMMDIIKNEAPRWGAVVAFSPTGWSYRKSMEKDGE 323
Query: 261 TQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
+ E E G Y+VPYS+HS +TE+ EF+ ++P I V++S+
Sbjct: 324 FRVEPWIENEGRT-----RTYAVPYSEHSSYTELREFIKFLKPKRITPTVNAST 372
>gi|18394685|ref|NP_564070.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
thaliana]
gi|332191672|gb|AEE29793.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
thaliana]
Length = 549
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 148/347 (42%), Gaps = 53/347 (15%)
Query: 18 YFLTHLHSDHTQGLS-SAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
+FLTH H DHT G+S S P++ + LT L +FP LD S ++IG S+ V
Sbjct: 29 HFLTHAHKDHTVGVSPSNIVVFPIYSTSLTISLLLQRFPQLDESYFVRVEIG--QSVIVD 86
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA----SNERAEI 132
P GE +V A DANHCPG +VM LF G FG +L+TGD R S +
Sbjct: 87 DPD-GE---FKVTAFDANHCPG----AVMFLFEGSFGNILHTGDCRLTLDCLHSLPEKYV 138
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYA--FPSREVAAQQI--WVW-----PERLQTMH 183
GR+ +K + ++LD T+ SS++ FP++ A +QI +W P
Sbjct: 139 GRSHGMKPKCS--LGYIFLDCTFGKSSHSQRFPTKHSAIRQIINCIWNHPDAPVVYLACD 196
Query: 184 LLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGI--------MPSGLPWVVK 235
+LG D+ + + + +++ SL + P I + SG P + +
Sbjct: 197 MLGQEDVLLEVSRTFGSKIYVDKATNLECFRSLMVIVPEIVSEDPSSRFHIFSGFPKLYE 256
Query: 236 PLKGGGSLPGSLFSSY---------------QSKWRATGGTQTEKLKEALGSVDRFHKYI 280
+ S S + W++ + K++ + D F +
Sbjct: 257 RTSAKLAEARSKLQSEPLIIRPSAQWYVCDDEDDWKSGSIQKQRKVRFSEAVKDEFG--L 314
Query: 281 YSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
+ V YS HS E+E + L+ P + V SC L Y + C
Sbjct: 315 WHVCYSMHSSRAELESAMQLLSPKWVVSTV--PSCRAMELNYVKKNC 359
>gi|242812130|ref|XP_002485895.1| DNA repair protein Pso2/Snm1, putative [Talaromyces stipitatus ATCC
10500]
gi|218714234|gb|EED13657.1| DNA repair protein Pso2/Snm1, putative [Talaromyces stipitatus ATCC
10500]
Length = 792
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 25/174 (14%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD + EG Q YFL+H HSDH GL+++W+ G ++CS++T L + L +
Sbjct: 368 ITVDAFRYGSVEGCQAYFLSHFHSDHYGGLTASWSHGLIYCSKVTGNLVRQQ---LKVDP 424
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-----GDFGCLL 116
V+D+ + + V + G V V + ANHCPG S + LF G +L
Sbjct: 425 KYVVDL-EFEKKTEVPNTKG----VYVTMLYANHCPG----SSLFLFEKVMDTGRIHRVL 475
Query: 117 YTGDFRWEASNERAEIGRNTLVKALK----DDVVDILYLDNTYCNSSYAFPSRE 166
+ GDFR ++ + + + +V +D+ YLD TY N YAFP++E
Sbjct: 476 HCGDFRACPAHVQHPLLKPDVVDVASGQSHQQRIDVCYLDTTYLNPKYAFPNQE 529
>gi|351713833|gb|EHB16752.1| Protein artemis, partial [Heterocephalus glaber]
Length = 677
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 28/177 (15%)
Query: 6 ISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARG--------PLFCSRLTAKLFPLKF 54
+S+DR+ ++ YFL+H H DH +GL + + L+CS +T +L L
Sbjct: 13 VSIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVHLYCSPVTKELL-LTS 71
Query: 55 PGLDLSLIRV--LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
P R+ ++I + IS+V +SGE+ + V + A HCPG SVM LF+G+
Sbjct: 72 PKYRFWEKRIVSIEIETPTQISLVDEASGEEEEIVVTLLPAGHCPG----SVMFLFQGNN 127
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPSR 165
G +LYTGDFR + E R L+ + ++D + +YLD T+C+ Y PSR
Sbjct: 128 GTVLYTGDFRL----AKGEAARMELLHSGGRVRD--IQSVYLDTTFCDPRFYQIPSR 178
>gi|67901204|ref|XP_680858.1| hypothetical protein AN7589.2 [Aspergillus nidulans FGSC A4]
gi|40742979|gb|EAA62169.1| hypothetical protein AN7589.2 [Aspergillus nidulans FGSC A4]
Length = 2412
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 6 ISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
ISVD + E YFL+H HSDH GLS +W GP++CSR TA L + +D
Sbjct: 1431 ISVDAFRYGAVESCNAYFLSHFHSDHYIGLSKSWRHGPIYCSRATANLVRQQL-KVDPKW 1489
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------- 114
+ LD + P +G V+V I+ANHCPG S + LF
Sbjct: 1490 VVDLDFEKKTEV----PGTGG---VQVTMIEANHCPG----SAIFLFEKAVSSGASTRIQ 1538
Query: 115 -LLYTGDFRWEASNERAEIGRNTLVKALK----DDVVDILYLDNTYCNSSYAFP 163
+L+ GDFR + + + R +V +D YLD TY + YAFP
Sbjct: 1539 RVLHCGDFRASPQHVQHALLRPDVVDPKTGKRWQQRIDACYLDTTYLSPKYAFP 1592
>gi|261203089|ref|XP_002628758.1| DNA repair protein Pso2/Snm1 [Ajellomyces dermatitidis SLH14081]
gi|239586543|gb|EEQ69186.1| DNA repair protein Pso2/Snm1 [Ajellomyces dermatitidis SLH14081]
Length = 845
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFL+H HSDH GL+S+W G ++CS +T L + +D I +D
Sbjct: 427 EGCRAYFLSHFHSDHYIGLTSSWCHGQIYCSTVTGNLVRQQL-KVDPKWITDIDFDKTFE 485
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
I + V + ANHCPG S + LF +L+ GDFR
Sbjct: 486 IP-------QTNGAWVTMLPANHCPG----SSIFLFEKQINTGPKPRVHRILHCGDFRAC 534
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
++ + + R +V +L K ++D+ YLD TY N YAFP++
Sbjct: 535 PAHVQHPLLRPDVVDSLTGKVKQQLIDVCYLDTTYLNPKYAFPNQ 579
>gi|156063186|ref|XP_001597515.1| hypothetical protein SS1G_01709 [Sclerotinia sclerotiorum 1980]
gi|154697045|gb|EDN96783.1| hypothetical protein SS1G_01709 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1001
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G YFL+H HSDH GL+S+W+ GP++CS++T L + L + V+ I I
Sbjct: 574 GCNAYFLSHFHSDHYIGLTSSWSYGPIYCSKVTGNLVKQQ---LKVDPKWVVSIEFEDKI 630
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF-----RGD---FGCLLYTGDFRWEA 125
V + V V I ANHCPG S + LF RG +L+ GDFR
Sbjct: 631 EVPNTQG-----VSVTMIPANHCPG----SSLFLFEKTTTRGQNPKVQRILHCGDFRACP 681
Query: 126 SNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSRE 166
++ + +V L K +D+ YLD TY N Y+FPS++
Sbjct: 682 AHIAHPLLMPNVVDTLSGKTKQQKIDVCYLDTTYLNPKYSFPSQD 726
>gi|328850728|gb|EGF99889.1| hypothetical protein MELLADRAFT_40002 [Melampsora larici-populina
98AG31]
Length = 471
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 80/179 (44%), Gaps = 40/179 (22%)
Query: 1 MEKGLISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
ME I+VD + G YFL+H H+DH LS W G ++CS+ TA L G
Sbjct: 98 MEGTTIAVDAFKYGKIPNITAYFLSHAHADHYTRLSHTWDHGFVYCSQTTANLICHNL-G 156
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVE---VIAIDANHCPGILGCSVMLLFRG--- 110
+ ++ L E T V+ V +DANHCPG S + LF G
Sbjct: 157 VKKQWVKPL-------------KDNEPTMVDGVKVTVLDANHCPG----SSLFLFEGVKP 199
Query: 111 ---DFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
F L+ GDFR + R ALKD +DI YLD TY N Y FP++E
Sbjct: 200 QGKPFR-YLHCGDFRASPAQLRH--------PALKDKKIDICYLDTTYLNPKYCFPAQE 249
>gi|327349624|gb|EGE78481.1| DNA repair protein Pso2/Snm1 [Ajellomyces dermatitidis ATCC 18188]
Length = 845
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFL+H HSDH GL+S+W G ++CS +T L + +D I +D
Sbjct: 427 EGCRAYFLSHFHSDHYIGLTSSWCHGQIYCSTVTGNLVRQQL-KVDPKWITDIDFDKTFE 485
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
I + V + ANHCPG S + LF +L+ GDFR
Sbjct: 486 IP-------QTNGAWVTMLPANHCPG----SSIFLFEKQVNTGPKPRVHRILHCGDFRAC 534
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
++ + + R +V +L K ++D+ YLD TY N YAFP++
Sbjct: 535 PAHVQHPLLRPDVVDSLTGKVKQQLIDVCYLDTTYLNPKYAFPNQ 579
>gi|449459252|ref|XP_004147360.1| PREDICTED: uncharacterized protein LOC101217143 [Cucumis sativus]
Length = 624
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 35/209 (16%)
Query: 1 MEKGL-ISVDRWTEGSQV---YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M +GL SVD W+ S+ +FLTH H DHT G+ ++ P++ + LT + +FP
Sbjct: 5 MPQGLPFSVDTWSPSSKKKRHHFLTHAHRDHTTGIVPHFS-FPIYSTFLTKSIVLQQFPQ 63
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
L SL +++G S+ V P V DA+HCPG +VM LF G FG +L
Sbjct: 64 LHDSLFVCIEVG--QSLVVKDPDGA----FTVTVFDAHHCPG----AVMFLFEGYFGNVL 113
Query: 117 YTGDFRWE-------ASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAA 169
+TGD R R + G+ K +D+++LD T+ FPSR +
Sbjct: 114 HTGDCRLTPECLQNLPEKYRGKSGKEPRCK------LDLIFLDCTFGRFFQQFPSRHSSI 167
Query: 170 QQ----IWVWPER---LQTMHLLGFHDIF 191
Q IW P+ +LLG DI
Sbjct: 168 HQIINCIWKHPDAPLVYLICNLLGQEDIL 196
>gi|390600201|gb|EIN09596.1| DRMBL-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 486
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 86/191 (45%), Gaps = 36/191 (18%)
Query: 1 MEKGLISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M+ I+VD + GS YFLTH HSDH LSS+W GP++CS T KL + G
Sbjct: 41 MQGMPIAVDAFRYGSIPGVTAYFLTHAHSDHYTNLSSSWRSGPIYCSECTGKLI-IHMLG 99
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG------ 110
+D + L +I P++G V+V +DANHCPG S + LF G
Sbjct: 100 VDRKWVHFLPFDQETTI----PNTGG---VKVTLLDANHCPG----SCLFLFEGPQTVNA 148
Query: 111 --------------DFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYC 156
F FR+ + R+ A+K +D++YLD TY
Sbjct: 149 GDSNYNSPFVPSNSTFKATKQARMFRYLHCGDFRASPRHVNHPAVKGKKIDVVYLDTTYL 208
Query: 157 NSSYAFPSREV 167
+ Y FP +++
Sbjct: 209 DLKYCFPPQKL 219
>gi|323453522|gb|EGB09393.1| hypothetical protein AURANDRAFT_24389, partial [Aureococcus
anophagefferens]
Length = 220
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 85/172 (49%), Gaps = 31/172 (18%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+ LTH HSDHT GL + + G ++CS +T +L +FPG I LD G+ S++V
Sbjct: 35 WLLTHAHSDHTCGLRANFDAGTIYCSTITKRLVAREFPGRLGDRIETLDPGA--SVTV-- 90
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRWE-ASNERAEIGRN 135
G T + AIDA HCPG +V+ L + G L+TGD R A E +
Sbjct: 91 ---GRTT---ITAIDAGHCPG----AVLFLLAHESGATALHTGDMRASPAVTEETK---- 136
Query: 136 TLVKALKDDVVDILYLDNTYCNSSYAFPSR--------EVAAQQIWVWPERL 179
KAL VD+LYLD TY FPS+ +V Q++ P+ L
Sbjct: 137 ---KALAGRAVDVLYLDTTYAAPQNDFPSQGEACAVIADVVTQELAREPKTL 185
>gi|297838379|ref|XP_002887071.1| ATP dependent DNA ligase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332912|gb|EFH63330.1| ATP dependent DNA ligase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1413
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 84/164 (51%), Gaps = 41/164 (25%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFP--LKFP-----GLDLSLIRVLDI 67
S +FL+H HSDH GLSS W++G +FCS TA+L L+ P L ++ + ++D
Sbjct: 79 SVAFFLSHFHSDHYSGLSSTWSKGIIFCSHKTARLVEEILQVPSQFVFALPMNQMVMID- 137
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-----GDFGCLLYTGDFR 122
GS EV+ I+ANHCPG +V LF+ G F ++TGDFR
Sbjct: 138 GS-----------------EVVLIEANHCPG----AVQFLFKVKLENGGFERYVHTGDFR 176
Query: 123 WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
+ E+ ++ + D ++LD TYCN + FP++E
Sbjct: 177 F-----CDEMRFDSFLSGFIG--CDGVFLDTTYCNPKFVFPTQE 213
>gi|348542062|ref|XP_003458505.1| PREDICTED: protein artemis-like [Oreochromis niloticus]
Length = 626
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 94/192 (48%), Gaps = 36/192 (18%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL-------------FCSRL 45
E IS+DR+ ++ YFL+H H DH +GL +GPL +CS +
Sbjct: 10 EYPTISLDRFDRENLHARAYFLSHCHKDHMKGL-----KGPLLKRKLQFSRTVRLYCSFV 64
Query: 46 TAKLFPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P I L++ S IS+V +SGEK V V + A HCPG S
Sbjct: 65 TKELL-LNNPKYAFWEEYIVPLELESPTQISLVDEASGEKEEVVVTLLPAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASN-ERAE-IGRNTLVKALKDDVVDILYLDNTYCNSS-Y 160
VM LF G G +LYTGDFR + R E + + VK ++ +YLD+T+ + Y
Sbjct: 120 VMFLFEGSHGNVLYTGDFRLPVGDVSRMEHLHSGSRVKDIQS-----IYLDSTFYDPRFY 174
Query: 161 AFPSREVAAQQI 172
PSREV I
Sbjct: 175 QIPSREVCLSGI 186
>gi|195501976|ref|XP_002098027.1| GE10135 [Drosophila yakuba]
gi|194184128|gb|EDW97739.1| GE10135 [Drosophila yakuba]
Length = 740
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 78/156 (50%), Gaps = 28/156 (17%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDI 67
+DR T YFLTH H+DH GL+ + PL+ S TA+L F +D + I +D+
Sbjct: 288 IDRVTH----YFLTHFHADHYIGLTKKFCY-PLYVSPTTARLV-RTFIKIDETYIYEIDV 341
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEAS 126
++ VEV A++ANHCPG L M F+ G C+L+TGDFR A
Sbjct: 342 DQTLTVD----------GVEVTALEANHCPGAL----MFFFKLRSGECILHTGDFRASAD 387
Query: 127 NERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAF 162
E I N +D+LYLD TY N +Y F
Sbjct: 388 MESLPIFWNHA-------NIDLLYLDTTYLNKNYDF 416
>gi|118356261|ref|XP_001011389.1| hypothetical protein TTHERM_00433640 [Tetrahymena thermophila]
gi|89293156|gb|EAR91144.1| hypothetical protein TTHERM_00433640 [Tetrahymena thermophila
SB210]
Length = 492
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 132/314 (42%), Gaps = 58/314 (18%)
Query: 21 THLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSPSS 80
T+L DH +GLS W P++CS ++ L K+P + I L + + + ++ ++
Sbjct: 6 TNLIKDHYEGLSPLWDYSPIYCSEISKNLILQKYPK--IQNIHALQLNTKYEFTL---NN 60
Query: 81 GEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEAS-----------NER 129
E VEV DA+H PG SVM+LF+G G + +TGDFR+ S R
Sbjct: 61 IESLKVEVWFFDAHHIPG----SVMILFKGYMGTIFHTGDFRFNQSMIDCNPILFPPELR 116
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFP-SREVAAQQIWVWPER-----LQTMH 183
+ +N ++ +D + DNTYCN ++ FP EV + + + + L M
Sbjct: 117 TKNLQNCSIQ------IDEMIYDNTYCNPAFNFPRGDEVFKRMVEIIEKNRNKRVLIAMG 170
Query: 184 LLGFHDI-------FTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKP 236
LG DI F T + +A+ Y I T + G ++K
Sbjct: 171 ALGKEDICIKLSEYFQTLLIIGESKAIGTYRTDIFTTDR-----------DQGFIEIIKK 219
Query: 237 LKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEE 296
+ F S + T+ L D + Y VPYS HS F E+E
Sbjct: 220 RHREQKIQE--FKSLNYDFIVIT---TDFLMLDHKDPDGIN---YMVPYSLHSNFKEMEC 271
Query: 297 FLNLVQPSNIRGIV 310
+ + PS +R +V
Sbjct: 272 LVKAISPSILRRLV 285
>gi|357464661|ref|XP_003602612.1| DNA cross-link repair 1B protein [Medicago truncatula]
gi|355491660|gb|AES72863.1| DNA cross-link repair 1B protein [Medicago truncatula]
Length = 571
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 102/230 (44%), Gaps = 51/230 (22%)
Query: 1 MEKGL-ISVDRWTEGSQV----YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFP 55
M +GL SVD WT S++ +F+TH H DH+ ++S + P++ + LT L P
Sbjct: 5 MPQGLPFSVDTWTPSSKISKRHHFITHAHKDHSSNITSH-SSFPIYSTSLTKTLLLQHHP 63
Query: 56 GLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS------------ 103
LD SL V+++G S+ V P V A DANHCPG S
Sbjct: 64 QLDASLFLVIEVG--QSLIVDDPDGN----FTVTAFDANHCPGNFFLSNSYNQFLHLYFH 117
Query: 104 ---------VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDD------VVDI 148
VM LF G FG +L+TGD R E N VK + +D
Sbjct: 118 STMDDFEWAVMFLFEGKFGNILHTGDCRLT-----LECLFNLPVKYVGTKGKKPRCPLDC 172
Query: 149 LYLDNTYCNSSYAFPSREVAAQQ----IWVWPER---LQTMHLLGFHDIF 191
++LD T+ + + A P++ + QQ IW P+ T +LG DI
Sbjct: 173 VFLDCTFGDFARAMPTKHSSIQQVVNCIWKHPDASTVYLTCDILGQEDIL 222
>gi|302923351|ref|XP_003053657.1| hypothetical protein NECHADRAFT_65714 [Nectria haematococca mpVI
77-13-4]
gi|256734598|gb|EEU47944.1| hypothetical protein NECHADRAFT_65714 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG-----LDLSLIRVLDI 67
EG + YFL+H HSDH GL++ W GP++CS++T L + ++L + DI
Sbjct: 395 EGCKAYFLSHFHSDHYIGLTAKWRHGPIYCSKVTGSLVKQQLRTAEKWVVELEFEKPYDI 454
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF--------GCLLYTG 119
SV I ANHCPG S + LF+ + +L+ G
Sbjct: 455 PGTDGASVT-------------MIPANHCPG----SSLFLFQKNMRHGIGSRVQRILHCG 497
Query: 120 DFRWEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
DFR + + + + +V ++ K +DI YLD TY N Y+FP +
Sbjct: 498 DFRACPAQVQHPLLKPEIVDSISGKVKQQKIDICYLDTTYLNPRYSFPPQ 547
>gi|296206188|ref|XP_002750100.1| PREDICTED: protein artemis [Callithrix jacchus]
Length = 692
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 94/187 (50%), Gaps = 38/187 (20%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGL-----RAPALKRRLECSLKVCLYCSPV 64
Query: 46 TAKLFPLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P R++ +I + IS+V +SGEK + V + A HCPG S
Sbjct: 65 TKELL-LTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
VM LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+ +
Sbjct: 120 VMFLFQGNNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IQSVYLDTTFFDPRF 173
Query: 160 YAFPSRE 166
+ PSRE
Sbjct: 174 FQIPSRE 180
>gi|429849697|gb|ELA25052.1| DNA repair protein pso2 [Colletotrichum gloeosporioides Nara gc5]
Length = 828
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 32/169 (18%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G YFL+H HSDH GL++ W GP++CS++T L ++ + +R L+
Sbjct: 383 KGCNAYFLSHFHSDHYIGLTANWTHGPIYCSKVTGDLVKMQL-RVAAHWVRPLEFNE--- 438
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+V P + V V I ANHCPG S + LF G +L+ GDFR
Sbjct: 439 -TVDVPGT---EGVTVTMISANHCPG----SSLFLFEKTMGKGPSARKQRILHCGDFRAC 490
Query: 125 ASNERAEIGRNTLVKALKDDV--------VDILYLDNTYCNSSYAFPSR 165
A++ L ++D + +D+ YLD TY N Y+FP +
Sbjct: 491 P----AQVAHPLLKPEVQDSISGKTRQQKIDVCYLDTTYLNPRYSFPPQ 535
>gi|426196552|gb|EKV46480.1| hypothetical protein AGABI2DRAFT_185905 [Agaricus bisporus var.
bisporus H97]
Length = 456
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 27/167 (16%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G YFL+H HSDH LSS+W GP++CS +TA L + +D IR L + +
Sbjct: 56 GVTAYFLSHAHSDHYTNLSSSWKSGPIYCSEVTANLI-IYMLSVDKKWIRPLPMDT---- 110
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD------------- 120
+ P +G V+V I+ANHCPG S + LF G + GD
Sbjct: 111 PTIIPDTGG---VQVTLIEANHCPG----SCLFLFEGH--QTVNAGDSTFRSTFVGSSRM 161
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
FR+ + R+ A+ +D +YLD TY N Y FP + +
Sbjct: 162 FRYLHCGDFRASPRHITHPAMTGKKIDCVYLDTTYLNPRYTFPPQPL 208
>gi|63054513|ref|NP_593231.2| DNA 5' exonuclease (predicted) [Schizosaccharomyces pombe 972h-]
gi|19862928|sp|Q10264.3|PSO2_SCHPO RecName: Full=DNA cross-link repair protein pso2/snm1
gi|159883918|emb|CAA93588.2| DNA 5' exonuclease (predicted) [Schizosaccharomyces pombe]
Length = 560
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 27/162 (16%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G + YFL+H HSDH GL+ W GP++CS +T L + +D ++ L + ++
Sbjct: 206 DGVEAYFLSHFHSDHYGGLTPKWKHGPIYCSEVTGNLL-INVMHVDEQYVKRLKLNQPYN 264
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR----GDFGCLLYTGDFRWEASNE 128
I ++ V +DANHCPG S M +F +L+ GDFR AS +
Sbjct: 265 IMGIT----------VYVLDANHCPG----SAMFVFETLQSNQTRRVLHCGDFR--ASKD 308
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
+ + L++ + +YLD TY N Y FP + Q
Sbjct: 309 ------HVMHPVLREKTIHKVYLDTTYLNPKYTFPPQADVVQ 344
>gi|126340452|ref|XP_001369072.1| PREDICTED: protein artemis-like [Monodelphis domestica]
Length = 681
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 90/179 (50%), Gaps = 32/179 (17%)
Query: 6 ISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRLTAKL 49
IS+DR+ ++ YFL+H H DH +GL R P L+CS +T +L
Sbjct: 14 ISIDRFDRQNLLARAYFLSHCHKDHMKGL-----RAPPLKRRLECSLKVHLYCSPVTKEL 68
Query: 50 FPLKFPGLDLSLIRV--LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLL 107
L P R+ L+I + IS++ +SGEK V V + A HCPG SVM L
Sbjct: 69 L-LTSPKYSFWEKRIIALEIETPTQISLIDEASGEKEEVVVTLLPAGHCPG----SVMFL 123
Query: 108 FRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSS-YAFPSR 165
F+G+ G +LYTGDFR A E A + +KD + +YLD T+ + Y PSR
Sbjct: 124 FQGNNGTVLYTGDFRL-AKGEAARMEFLHSGSRVKD--IQSVYLDTTFFDPKFYQIPSR 179
>gi|310800348|gb|EFQ35241.1| DNA repair metallo-beta-lactamase [Glomerella graminicola M1.001]
Length = 879
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 26/166 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G YFL+H HSDH GL++ W GP++CS++T L ++ + +R L+
Sbjct: 434 KGCNAYFLSHFHSDHYIGLTANWTHGPIYCSKVTGDLVKMQL-RVAAHWVRPLEFDE--- 489
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+V P + V V I ANHCPG S + LF G +L+ GDFR
Sbjct: 490 -TVDVPGT---DGVTVTMIPANHCPG----SSLFLFEKTMGKGPSAKKQRILHCGDFRAC 541
Query: 125 ASNE-----RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
+ + E+ ++++ +++ +D+ YLD TY N Y+FP +
Sbjct: 542 PAQVAHPLLKPEV-QDSISGKVREQKIDVCYLDTTYLNPRYSFPPQ 586
>gi|26351057|dbj|BAC39165.1| unnamed protein product [Mus musculus]
Length = 486
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 124/317 (39%), Gaps = 86/317 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD W+ ++++FLTH+H DHT GLSS WAR PL+CS +T GL L+
Sbjct: 11 IAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPIT---------GLPLA- 59
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGD 120
S +G+ + + + ILG + L+ + C
Sbjct: 60 ---------------SSPAGDFRYTPSMLKEPA---LILGKQIHTLYLDNTNCNPALVLP 101
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVW--PER 178
R EA+ + ++ R +K + + L A R WV P+R
Sbjct: 102 SRQEATQQIVQLIRQFPQHNIK---IGLYSLGKESLLEQLALEFR------TWVVLSPQR 152
Query: 179 LQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLK 238
L+ + LLG D+FT + R+ AV + N HPTI I P+
Sbjct: 153 LELVQLLGLADVFTVEEEAGRIHAVDHTEICHSAMLQWNQSHPTIAIFPT---------- 202
Query: 239 GGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFL 298
+ K++ H IY+VPYSDHS ++E+ F+
Sbjct: 203 ------------------------SRKVRSP-------HPSIYTVPYSDHSSYSELRAFV 231
Query: 299 NLVQPSNIRGIVSSSSC 315
++P + IV C
Sbjct: 232 AALRPCQVVPIVHQKPC 248
>gi|255715219|ref|XP_002553891.1| KLTH0E09570p [Lachancea thermotolerans]
gi|238935273|emb|CAR23454.1| KLTH0E09570p [Lachancea thermotolerans CBS 6340]
Length = 595
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 28/153 (18%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFL+H H+DH G+ +W +G ++CS++TA L KF + R++ + + +I + S
Sbjct: 213 YFLSHFHADHYMGVKKSWDQGTIYCSKVTADLLIYKF---KVPQDRIIALPAEVTIQISS 269
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-------LLYTGDFRWEASNERA 130
V VI DANHCPG + + LFR +FG +L+TGDFR ++N+
Sbjct: 270 N-------VSVICFDANHCPG----AFVFLFR-EFGGDNETVQWVLHTGDFR--SNNDLI 315
Query: 131 EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFP 163
+++ +D +YLD TY SY FP
Sbjct: 316 ----TKIIEHTSGKPIDKVYLDTTYMYPSYHFP 344
>gi|213408198|ref|XP_002174870.1| DNA cross-link repair protein pso2/snm1 [Schizosaccharomyces
japonicus yFS275]
gi|212002917|gb|EEB08577.1| DNA cross-link repair protein pso2/snm1 [Schizosaccharomyces
japonicus yFS275]
Length = 573
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 76/157 (48%), Gaps = 27/157 (17%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G + YFL+H HSDH GLSS+W GP++CS +T +L +D I+ L H+
Sbjct: 218 DGVEAYFLSHFHSDHYGGLSSSWCHGPIYCSSVTGRLLE-NILHVDKKYIKCLSENEPHN 276
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC----LLYTGDFRWEASNE 128
+ V+ V I ANHCPG S + LF +L+TGDFR
Sbjct: 277 VYGVT----------VFVIPANHCPG----SSIFLFETIHSEGTKRVLHTGDFR----AC 318
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
RA I L+D + LYLD TY + Y P++
Sbjct: 319 RAHIEH----PLLRDKHIHRLYLDTTYLDPKYMLPAQ 351
>gi|312384994|gb|EFR29591.1| hypothetical protein AND_01303 [Anopheles darlingi]
Length = 265
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 20/174 (11%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLS-SAWARGPLFCSRLTAKLFPLKFPGLDLS 60
I++DR+ + + +FL+H H+DH +GL GPLF S ++ +FP
Sbjct: 14 IAIDRFEPEQRQRASAFFLSHCHTDHMRGLELDDVLPGPLFLSPVSGVFIRHRFPQ-HAP 72
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTF-VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTG 119
+R + IG ++++ GE+ + + V +I A HCPG SVM F +LYTG
Sbjct: 73 RVRTMAIGEQLTLTIHPAEPGEEEYELTVRSIAAEHCPG----SVMFFFETTTERILYTG 128
Query: 120 DFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYA-FPSREVAAQQI 172
DFR + G +++++L+ +V YLD+T+ N Y FP+R + ++I
Sbjct: 129 DFRLSQGH-----GNTSVIRSLRPQIV---YLDSTFLNQDYNHFPTRIESTEKI 174
>gi|225554413|gb|EEH02711.1| DNA cross-link repair protein pso2/snm1 [Ajellomyces capsulatus
G186AR]
Length = 843
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+S+W G ++CS +T L + L + V DI +
Sbjct: 428 EGCTAYFLSHFHSDHYIGLTSSWCHGQIYCSTVTGNLVRQQ---LKVDPKWVTDI-EFDQ 483
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ + G + V + ANHCPG S + LF +L+ GDFR
Sbjct: 484 PFEIPRTCGAR----VTMLPANHCPG----SSIFLFEKRVNKSREPKVRRILHCGDFRAS 535
Query: 125 ASNERAEIGR----NTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
++ + I R ++L ++ ++D+ YLD TY N YAFPS+
Sbjct: 536 PTHVQHPILRPNITDSLTGKVRQQIIDVCYLDTTYLNPKYAFPSQ 580
>gi|311705715|gb|ADQ01123.1| artemis [Saimiri sciureus]
Length = 692
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPALKRRLECSLKVCLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
L P R++ +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 -LTNPKYRFWEKRIMSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+ + + PS
Sbjct: 125 QGNNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IHSVYLDTTFFDPRFFQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|240273448|gb|EER36968.1| DNA cross-link repair protein pso2/snm1 [Ajellomyces capsulatus
H143]
Length = 841
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 24/165 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+S+W G ++CS +T L + L + V DI
Sbjct: 426 EGCTAYFLSHFHSDHYIGLTSSWCHGQIYCSTVTGNLVRQQ---LKVDPKWVTDIEFDQP 482
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ V + ANHCPG S + LF +L+ GDFR
Sbjct: 483 FEI-----PRTCGARVTMLPANHCPG----SSIFLFEKRVNKSREPKVRRILHCGDFRAS 533
Query: 125 ASNERAEIGR----NTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
++ + I R ++L ++ ++D+ YLD TY N YAFPS+
Sbjct: 534 PTHVQHPILRPDITDSLTGKVRQQIIDVCYLDTTYLNPKYAFPSQ 578
>gi|154271294|ref|XP_001536500.1| hypothetical protein HCAG_08282 [Ajellomyces capsulatus NAm1]
gi|150409170|gb|EDN04620.1| hypothetical protein HCAG_08282 [Ajellomyces capsulatus NAm1]
Length = 835
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+ +W G ++CS +T L + L + V DI +
Sbjct: 415 EGCTAYFLSHFHSDHYIGLTPSWCHGQIYCSTVTGNLVRQQ---LKVDPKWVTDI-EFDK 470
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ +SG + V + ANHCPG S + LF +L+ GDFR
Sbjct: 471 PFEIPRTSGAR----VTMLPANHCPG----SSIFLFEKRVNKSHEPKVRRILHCGDFRAS 522
Query: 125 ASNERAEIGR----NTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
++ + I R ++L ++ ++D+ YLD TY N YAFPS+
Sbjct: 523 PTHVQHPILRPDITDSLTGKVRQQIIDVCYLDTTYLNPKYAFPSQ 567
>gi|325087347|gb|EGC40657.1| DNA cross-link repair protein pso2/snm1 [Ajellomyces capsulatus
H88]
Length = 841
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 24/165 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+S+W G ++CS +T L + L + V DI
Sbjct: 426 EGCTAYFLSHFHSDHYIGLTSSWCHGQIYCSTVTGNLVRQQ---LKVDPKWVTDIEFDQP 482
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
+ V + ANHCPG S + LF +L+ GDFR
Sbjct: 483 FEI-----PRTCGARVTMLPANHCPG----SSIFLFEKRVNKSREPKVRRILHCGDFRAS 533
Query: 125 ASNERAEIGR----NTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
++ + I R ++L ++ ++D+ YLD TY N YAFPS+
Sbjct: 534 PTHVQHPILRPDITDSLTGKVRQQIIDVCYLDTTYLNPKYAFPSQ 578
>gi|395326663|gb|EJF59070.1| DRMBL-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 496
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 27/180 (15%)
Query: 1 MEKGLISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M+ I+VD + G+ YFLTH HSDH LS+ W GP++CS TA L + G
Sbjct: 66 MQGMPIAVDAFRYGTIPNVTAYFLTHAHSDHYTNLSARWDSGPIYCSEGTANLI-IHMLG 124
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG----DF 112
+D + L + ++ P++G V+V I+ANHCPG S + LF G +
Sbjct: 125 VDPKWVHALPM----DVATTIPNTGG---VQVTLIEANHCPG----SCLFLFEGKQTVNA 173
Query: 113 GCLLYTGD-------FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
G Y FR+ + ++ L A+K +D YLD TY + Y FP +
Sbjct: 174 GDSAYKSSYVGSAKIFRYLHCGDFRASPQHVLHPAIKGKRIDHCYLDTTYLDPKYCFPPQ 233
>gi|170087900|ref|XP_001875173.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650373|gb|EDR14614.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 434
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 84/181 (46%), Gaps = 34/181 (18%)
Query: 1 MEKGLISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M+ I+VD + G+ YFLTH HSDH LSS W GP++CS+ TA L +
Sbjct: 39 MQGMPIAVDAFRYGTIPGVTAYFLTHAHSDHYTNLSSTWQSGPIYCSQGTANLI-IHMLS 97
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG------ 110
+D + L + + + P++ V+V I+ANHCPG S + F G
Sbjct: 98 VDRKWVHPLPM----DVPTIIPNTNG---VQVTLIEANHCPG----SCLFFFEGLQTSPF 146
Query: 111 ----DFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
L+ GDFR R+ + A+K +D +YLD TY + Y FP +
Sbjct: 147 IGSSKVFRYLHCGDFRASP--------RHVVHPAVKGKPIDHVYLDTTYLDPQYTFPPQP 198
Query: 167 V 167
+
Sbjct: 199 L 199
>gi|125559879|gb|EAZ05327.1| hypothetical protein OsI_27531 [Oryza sativa Indica Group]
Length = 663
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 153/365 (41%), Gaps = 67/365 (18%)
Query: 1 MEKGL-ISVDRWTEGSQVY---FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
+ +GL +VD WT S V FLTH H DH G++ A ++ SRLT + FP
Sbjct: 5 LPRGLPFAVDTWTAASAVKRHRFLTHAHRDHIAGIT-ATNVAAVYASRLTILIARHIFPQ 63
Query: 57 LDLSLIRV-LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG-DFGC 114
LD + V +++G+ + V P G+ T V A DANHCPG +VM LF G FG
Sbjct: 64 LDRADAFVEVELGA--PVLVPDPD-GDFT---VTAFDANHCPG----AVMFLFEGASFGR 113
Query: 115 LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ--- 171
+L+TGD R L + D ++LD T+ S FPS++ + +Q
Sbjct: 114 VLHTGDCR--------------LTPDFRFLAADYVFLDCTFAACSLHFPSKDDSIRQVIN 159
Query: 172 -IWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPS-- 228
IW P ++L+ D+ + L V V +D ++ H + P
Sbjct: 160 CIWKHP-NAPVVYLVS--DMLGQEEILMEVSKVFGSKIYVDRDKNSECYHTLSLVAPEIL 216
Query: 229 -----------GLPWVVK------PLKGGGSLPGSLFSSYQSKWRA-----TGGTQTEKL 266
G P + + L P L S+W A G T K
Sbjct: 217 TDNSSSRFQVIGFPRLSERATEMLALARAKHQPEPLIIRASSQWYAYYEPPEGST---KR 273
Query: 267 KEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRL 326
K AL R ++ V +S HS E+E+ L +QP + I ++ C L Y +
Sbjct: 274 KPALTEPMRDEFGVWHVCFSMHSSREELEQALRFIQPKWV--ISTTPPCMAIELSYVKKH 331
Query: 327 CRANQ 331
C A++
Sbjct: 332 CFASR 336
>gi|115474405|ref|NP_001060799.1| Os08g0107600 [Oryza sativa Japonica Group]
gi|42408235|dbj|BAD09392.1| DNA ligase-like [Oryza sativa Japonica Group]
gi|113622768|dbj|BAF22713.1| Os08g0107600 [Oryza sativa Japonica Group]
gi|215767381|dbj|BAG99609.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 663
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 153/365 (41%), Gaps = 67/365 (18%)
Query: 1 MEKGL-ISVDRWTEGSQVY---FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
+ +GL +VD WT S V FLTH H DH G++ A ++ SRLT + FP
Sbjct: 5 LPRGLPFAVDTWTAASAVKRHRFLTHAHRDHIAGIT-ATNVAAVYASRLTILIACHIFPQ 63
Query: 57 LDLSLIRV-LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG-DFGC 114
LD + V +++G+ + V P G+ T V A DANHCPG +VM LF G FG
Sbjct: 64 LDRADAFVEVELGA--PVLVPDPD-GDFT---VTAFDANHCPG----AVMFLFEGASFGR 113
Query: 115 LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ--- 171
+L+TGD R L + D ++LD T+ S FPS++ + +Q
Sbjct: 114 VLHTGDCR--------------LTPDFRFLAADYVFLDCTFAACSLHFPSKDDSIRQVIN 159
Query: 172 -IWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPS-- 228
IW P ++L+ D+ + L V V +D ++ H + P
Sbjct: 160 CIWKHP-NAPVVYLVS--DMLGQEEILMEVSKVFGSKIYVDRDKNSECYHTLSLVAPEIL 216
Query: 229 -----------GLPWVVK------PLKGGGSLPGSLFSSYQSKWRA-----TGGTQTEKL 266
G P + + L P L S+W A G T K
Sbjct: 217 TDDSSSRFQVIGFPRLSERATEMLALARAKHQPEPLIIRASSQWYAYYEPPEGST---KR 273
Query: 267 KEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRL 326
K AL R ++ V +S HS E+E+ L +QP + I ++ C L Y +
Sbjct: 274 KPALTEPMRDEFGVWHVCFSMHSSREELEQALRFIQPKWV--ISTTPPCMAIELSYVKKH 331
Query: 327 CRANQ 331
C A++
Sbjct: 332 CFASR 336
>gi|403366058|gb|EJY82820.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 592
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 106/255 (41%), Gaps = 56/255 (21%)
Query: 79 SSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI-----G 133
+K V V+ +DA HCPG +VM LFRG G + +TGDFR+ EI
Sbjct: 10 DDSKKEGVSVMMMDAFHCPG----AVMFLFRGKMGTVFHTGDFRFSEQMFDNEILFPPSK 65
Query: 134 RNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIFTT 193
RN +K + D+ D L+LDNT+ + Y FPSRE A + + T+ H IF
Sbjct: 66 RNPQMKQISVDI-DYLFLDNTFADPEYDFPSREEAYKSL------TDTIKSHKDHRIFLF 118
Query: 194 KTSLTRVRAVPRYSFSIDTLE----------SLNTMHPTIGIMPSGLPWV-VKPLKGGGS 242
+L + + +TL S+ + P + W+ +K +
Sbjct: 119 SYNLGKEEVFVNLAQDFETLVVVDEDRFRKLSIMDLRPDLFTTDEKQGWIHIKSI----- 173
Query: 243 LPGSLFSSYQSKWRATGGTQTEKLKEALGSV--------DRFHK---YIYSVPYSDHSCF 291
R EK E ++ D++++ Y + VPYS HS +
Sbjct: 174 -------------RELKKFDIEKCNEEEPTIFIIMTGWNDKYNRNLPYYFKVPYSSHSNY 220
Query: 292 TEIEEFLNLVQPSNI 306
EIE F+ + P N+
Sbjct: 221 REIERFVKAMMPKNL 235
>gi|401626290|gb|EJS44243.1| pso2p [Saccharomyces arboricola H-6]
Length = 666
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 32/177 (18%)
Query: 18 YFLTHLHSDHTQGLSSAW-------ARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
+FL+H HSDH GL +W + L+CS++TA L LKF + + I++L
Sbjct: 251 FFLSHFHSDHYIGLKKSWNNPEENTVKKTLYCSKITAILVNLKF-KIPMDEIQILPTNKR 309
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG--------CLLYTGDFR 122
I+ + V+++DANHCPG ++++LF+ +L+TGDFR
Sbjct: 310 FWITDT---------ISVVSLDANHCPG----AIIMLFQEFLSRSEDKPIRQILHTGDFR 356
Query: 123 WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
A R I R + +D++D +YLD TY Y FPS+ + + RL
Sbjct: 357 SNAGMIRT-IER--WLTETSNDIIDQVYLDTTYLTMGYNFPSQNSVCNTVADFTSRL 410
>gi|308498135|ref|XP_003111254.1| hypothetical protein CRE_03853 [Caenorhabditis remanei]
gi|308240802|gb|EFO84754.1| hypothetical protein CRE_03853 [Caenorhabditis remanei]
Length = 616
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 93/175 (53%), Gaps = 22/175 (12%)
Query: 6 ISVDRWTEGSQ--VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIR 63
I+VD + + S+ +FLTH H+DHT+GL R P++CS TA + P K G+D
Sbjct: 253 IAVDYFIKRSKRPYHFLTHAHTDHTRGLDLTAGR-PVYCSPQTALILP-KIMGVDPK--H 308
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG----DF--GCLLY 117
+LD G+ + ++ P E +V +DANHCPG SVM LF G +F G +L
Sbjct: 309 ILD-GTICPLELMRPHRFEG--FQVTLLDANHCPG----SVMFLFEGYLIEEFAGGPVLC 361
Query: 118 TGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
TGDFR + + G + + + +YLDNTY FP+R+ A +++
Sbjct: 362 TGDFRADKTFMNRLDGPLNFLSEFR---LARIYLDNTYFKLDLEFPTRKSAQKKL 413
>gi|303284621|ref|XP_003061601.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456931|gb|EEH54231.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 698
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 138/346 (39%), Gaps = 108/346 (31%)
Query: 18 YFLTHLHSDHTQGLS-SAWARG-PLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
+FLTH H+DH GL+ S + G ++CSR TA+L L+ G+ S +R +D+G +
Sbjct: 367 WFLTHFHADHYAGLTRSTPSEGCVVWCSRPTARLCQLRL-GISKSRLRAVDVGRDFIVE- 424
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR---GDFGCLLYTGDFRWEASNERAEI 132
V+ + ANHCPG +VM++F G G +L TGD R+ AS
Sbjct: 425 ---------GVKCRFVHANHCPG----AVMIVFDDIPGGGGPVLATGDCRFHAS------ 465
Query: 133 GRNTLVKALK--DDVVDILYLDNTYCNSSYAFPSRE------------------------ 166
TL L + + LD TYC+ +AFP +E
Sbjct: 466 --MTLDPGLLRIQERRPAVMLDTTYCDPKHAFPPQEEVLKAVAVAVKAENFNPKCLFLFG 523
Query: 167 ---------------VAAQQIWVWPERLQTMHLLG------FHDIFTTKTSLTRVRAVPR 205
++++V ++ Q + LG + D TT + T + VP
Sbjct: 524 TYTIGKERVFFEAAKALGKKVYVGKQKRQVLDALGDAIDKTYMDSVTTDDTETNLHVVPM 583
Query: 206 YSFSIDTLESL-----NTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGG 260
S S ++++ N I P+G W F RAT
Sbjct: 584 GSTSFARMKTILRYYKNRYDTVIAFKPTG--WT--------------FEKAAKTARATKR 627
Query: 261 TQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
TQ L + Y++PYS+HS FTE+ F+ ++P I
Sbjct: 628 TQRGSLIQ------------YALPYSEHSSFTELRAFMRWLKPRAI 661
>gi|403278119|ref|XP_003930673.1| PREDICTED: protein artemis [Saimiri boliviensis boliviensis]
Length = 785
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 93/178 (52%), Gaps = 28/178 (15%)
Query: 6 ISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLFPLKF 54
IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L L
Sbjct: 107 ISIDRFDRENLRARAYFLSHCHKDHMKGLRAPALKRRLECSLKVCLYCSPVTKELL-LTN 165
Query: 55 PGLDLSLIRVL--DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
P R++ +I + IS+V +SGEK + V + A HCPG SVM LF+G+
Sbjct: 166 PKYRFWEKRIMSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLFQGNN 221
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPSRE 166
G +LYTGDFR + E R L+ + +KD + +YLD T+ + + PSRE
Sbjct: 222 GTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IHSVYLDTTFFDPRFFQIPSRE 273
>gi|393221757|gb|EJD07241.1| DRMBL-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 485
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 79/173 (45%), Gaps = 39/173 (22%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G + YFLTH HSDH LSS W GP++CS TA L +D + L + +
Sbjct: 72 GVEAYFLTHAHSDHYTNLSSNWKSGPIYCSETTANLIAHML-SVDRKWLHPLPMNT---- 126
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------------------- 114
V P++G V+V +DANHCPG S + LF G
Sbjct: 127 PVEVPNTGG---VKVTLLDANHCPG----SCLFLFEGSQTTNAGDSTYKSPFVGTSRTFR 179
Query: 115 LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
L+ GDFR AS + + L ++K +D +YLD TY N Y FP + +
Sbjct: 180 YLHCGDFR--ASPQ------HVLHPSVKGKRLDTVYLDTTYLNPRYCFPPQPL 224
>gi|242055193|ref|XP_002456742.1| hypothetical protein SORBIDRAFT_03g041750 [Sorghum bicolor]
gi|241928717|gb|EES01862.1| hypothetical protein SORBIDRAFT_03g041750 [Sorghum bicolor]
Length = 619
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 148/355 (41%), Gaps = 47/355 (13%)
Query: 1 MEKGL-ISVDRWTEGSQVY---FLTHLHSDH-TQGLSSAWARGPLFCSRLTAKLFPLKFP 55
M +GL +VD W ++ FLTH H DH + G ++ +RLT L FP
Sbjct: 5 MPRGLPFAVDTWGPSARRRRHRFLTHAHRDHLVGAGADIDGGGTVYATRLTLHLALRHFP 64
Query: 56 GLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL 115
L +++G ++ + P+ V DANHCPG +VM LF G FG +
Sbjct: 65 QLGSWEFVEMEVG--RTVELDDPTGA----FSVTTYDANHCPG----AVMFLFEGKFGTI 114
Query: 116 LYTGDFRWEASNERAEIGRNTLVKALKDDV--VDILYLDNTYCNSSYAFPSREVAAQQ-- 171
L+TGD R + + + K +++ +D ++LD T+ PS+E A +Q
Sbjct: 115 LHTGDCRLTPDCVQ-NLPMKYITKKGNNNICRLDFVFLDCTFSKCFLKLPSKESAIRQVI 173
Query: 172 --IWVWPER---LQTMHLLGFHDIFTTKTSLTRVRAVPRY-SFSIDTLESLNTMHPTIGI 225
IW P LLG DI ++R Y + +D ++L+ P I
Sbjct: 174 SCIWKHPHAPFVFLACDLLGHEDIL---VEVSRTFGSKIYVDWRLDCFKALSLTAPEIIT 230
Query: 226 MPSGLPWVVK-------------PLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGS 272
S + + + P LF ++W A+ K K +L
Sbjct: 231 DDSSSRFQMVGFHQLYDRASKELAVARANLQPEPLFIRPSTQWYASCA---RKQKPSLTE 287
Query: 273 VDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLC 327
++ I+ V +S HS E+E+ L L+QP + I ++ C+ L Y + C
Sbjct: 288 AEQDEFGIWHVCFSIHSSRDELEQALQLLQPQWV--ISTTPPCFAIELSYVKKHC 340
>gi|390178816|ref|XP_001359351.3| GA10012 [Drosophila pseudoobscura pseudoobscura]
gi|388859601|gb|EAL28496.3| GA10012 [Drosophila pseudoobscura pseudoobscura]
Length = 787
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 24/146 (16%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFLTH H+DH GL+ +A PLF S LTA+L F +D I +D+ +I V +
Sbjct: 367 YFLTHFHADHYIGLTKKFA-FPLFMSPLTARLV-QAFIKIDEMYIHEIDVD--QTILVDN 422
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
+++ I+ANHCPG L M F+ G C+L+TGDFR E I N
Sbjct: 423 --------IQITGIEANHCPGAL----MFFFKLSSGECILHTGDFRASFEMESLPIFWNN 470
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAF 162
+ +D+LYLD TY + +Y F
Sbjct: 471 I-------DIDLLYLDTTYLSGNYDF 489
>gi|239608422|gb|EEQ85409.1| DNA repair protein Pso2/Snm1 [Ajellomyces dermatitidis ER-3]
Length = 845
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG + YFL+H HSDH GL+S+W G ++CS +T L + +D I +D
Sbjct: 427 EGCRAYFLSHFHSDHYIGLTSSWCHGQIYCSTVTGNLVRQQL-KVDPKWITDIDFDKTFE 485
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWE 124
I + V + ANHCPG S + LF +L+ GDFR
Sbjct: 486 IP-------QTNGAWVTMLPANHCPG----SSIFLFEKQVNTGPKPRVHRILHCGDFRAC 534
Query: 125 ASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
++ + + R +V +L K ++D+ YLD TY + YAFP++
Sbjct: 535 PAHVQHPLLRPDVVDSLTGKVKQQLIDVCYLDTTYLSPKYAFPNQ 579
>gi|194898775|ref|XP_001978943.1| GG12882 [Drosophila erecta]
gi|190650646|gb|EDV47901.1| GG12882 [Drosophila erecta]
Length = 637
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G YFLTH H+DH GL+ + PL+ S TA+L F +D + I +++
Sbjct: 170 DGVTHYFLTHFHADHYIGLTKKFCY-PLYVSPTTARLV-QTFIKVDTTYIHEIEVDQTLV 227
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAE 131
++ V+V A++ANHCPG L M F+ G C+L+TGDFR A E
Sbjct: 228 VN----------GVQVTALEANHCPGAL----MFFFKLSSGECILHTGDFRGSADMESLP 273
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAF 162
I N +D+LYLD TY N +Y F
Sbjct: 274 IFWNHA-------NIDLLYLDTTYMNKNYDF 297
>gi|167523435|ref|XP_001746054.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775325|gb|EDQ88949.1| predicted protein [Monosiga brevicollis MX1]
Length = 893
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 74/158 (46%), Gaps = 30/158 (18%)
Query: 16 QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
Q +FL+H H+DH GL+ WA GP++ S TA+L + F +D I L H+I
Sbjct: 30 QKFFLSHYHADHYGGLNDKWAAGPIYASPPTARLV-IDFLEVDPKWIHELPFDETHTIDD 88
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF--RGDFGCL-----LYTGDFRWEASNE 128
VEV +DANHCPG + MLLF R L+TGD R+
Sbjct: 89 ----------VEVTLMDANHCPG----AAMLLFGVRNQHAPEQRMYHLHTGDCRFHP--- 131
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
R L+ ++ LYLD TY N Y FP +E
Sbjct: 132 -----RMLDHPTLQGIHIENLYLDTTYANPKYTFPPQE 164
>gi|390349305|ref|XP_781856.3| PREDICTED: protein artemis-like [Strongylocentrotus purpuratus]
Length = 389
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 149/338 (44%), Gaps = 63/338 (18%)
Query: 6 ISVDRWTEGSQV-----YFLTHLHSDHTQGLSSA-----WARGP---LFCSRLTAK--LF 50
I++DR+ +G V YFL+H H+DH GLSS P L+CS +T + L
Sbjct: 14 IAIDRF-QGDAVLRARGYFLSHCHTDHMVGLSSKKFADRLKCNPHIRLYCSEVTYEFLLT 72
Query: 51 PLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG 110
K+ L SL L I ++++V+ +G++ + V + A HCPG SVM LF G
Sbjct: 73 DDKYKHLQASL-SSLPIEQTSTVALVNEFNGQEEKLLVTLLPAGHCPG----SVMFLFEG 127
Query: 111 DFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAF-PSREVAA 169
D G +LYTGDFR A E A + +KD + +YLD T+C + PSR +
Sbjct: 128 DQGTVLYTGDFRL-AKGEAARMEPLHSGSRVKDIIS--VYLDTTFCVPEAMYIPSRGESK 184
Query: 170 QQIWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSG 229
+ + L+ H I + + ++ +Y + +E T + I + +
Sbjct: 185 DAL---------LDLVDSH-ISKSAGHMVKLNCKAKYGYEYLFVELSKTFNQKIHVCDTL 234
Query: 230 L------PWVVKPLKGGGSL---------PGSL------FSSYQSKWRATGGTQTEKLKE 268
+ P + L GSL P SL S S TG + E +
Sbjct: 235 MKQYNRVPDLCYHLTTEGSLTQIHACRYGPCSLKNATNILSITPSTMWFTGNARPEDVIR 294
Query: 269 ALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
+G Y + +S HS F+EI +FL ++P ++
Sbjct: 295 KVGRR-------YRLCFSFHSSFSEIRDFLGYIRPQHV 325
>gi|207342260|gb|EDZ70073.1| YMR137Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 616
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 32/185 (17%)
Query: 10 RWTEGSQVYFLTHLHSDHTQGLSSAWA-------RGPLFCSRLTAKLFPLKFPGLDLSLI 62
+ +E YFL+H HSDH GL +W + L+CS++TA L LKF + + I
Sbjct: 236 KASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSKITAILVNLKF-KIPMDEI 294
Query: 63 RVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-------- 114
++L + I+ + V+ +DANHCPG ++++LF+
Sbjct: 295 QILPMNKRFWITDT---------ISVVTLDANHCPG----AIIMLFQEFLANSYDKPIRQ 341
Query: 115 LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWV 174
+L+TGDFR SN + + ++ +D +YLD TY Y FPS+ + +
Sbjct: 342 ILHTGDFR---SNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVAD 398
Query: 175 WPERL 179
+ RL
Sbjct: 399 FTLRL 403
>gi|195152475|ref|XP_002017162.1| GL21672 [Drosophila persimilis]
gi|194112219|gb|EDW34262.1| GL21672 [Drosophila persimilis]
Length = 637
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 77/150 (51%), Gaps = 24/150 (16%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G YFLTH H+DH GL+ +A PLF S LTA+L F +D I +D+ +I
Sbjct: 213 GVTHYFLTHFHADHYIGLTKKFA-FPLFMSPLTARLV-RAFIKIDEMYIHEIDVD--QTI 268
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEI 132
V + +++ I+ANHCPG L M F+ G C+L+TGDFR E I
Sbjct: 269 LVDN--------IQITGIEANHCPGAL----MFFFKMSSGECILHTGDFRASFEMESLPI 316
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAF 162
N + +D+LYLD TY + +Y F
Sbjct: 317 FWNNI-------DIDLLYLDTTYLSGNYDF 339
>gi|151945839|gb|EDN64071.1| interstrand crosslink repair protein [Saccharomyces cerevisiae
YJM789]
Length = 661
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 32/177 (18%)
Query: 18 YFLTHLHSDHTQGLSSAWA-------RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
YFL+H HSDH GL +W + L+CS++TA L LKF + + I++L +
Sbjct: 244 YFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSKITAILVNLKF-KIPMDEIQILPMNKR 302
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFR 122
I+ + V+ +DANHCPG ++++LF+ +L+TGDFR
Sbjct: 303 FWITDT---------ISVVTLDANHCPG----AIIMLFQEFLANSYDKPIRQILHTGDFR 349
Query: 123 WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
SN + + ++ +D +YLD TY Y FPS+ + + + RL
Sbjct: 350 ---SNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRL 403
>gi|6323786|ref|NP_013857.1| Pso2p [Saccharomyces cerevisiae S288c]
gi|267010|sp|P30620.1|PSO2_YEAST RecName: Full=DNA cross-link repair protein PSO2/SNM1
gi|4502|emb|CAA45405.1| SMN1(PSO2) [Saccharomyces cerevisiae]
gi|606435|emb|CAA87351.1| DNA cross-link repair protein [Saccharomyces cerevisiae]
gi|256270434|gb|EEU05629.1| Pso2p [Saccharomyces cerevisiae JAY291]
gi|259148714|emb|CAY81959.1| Pso2p [Saccharomyces cerevisiae EC1118]
gi|285814139|tpg|DAA10034.1| TPA: Pso2p [Saccharomyces cerevisiae S288c]
Length = 661
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 32/177 (18%)
Query: 18 YFLTHLHSDHTQGLSSAWA-------RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
YFL+H HSDH GL +W + L+CS++TA L LKF + + I++L +
Sbjct: 244 YFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSKITAILVNLKF-KIPMDEIQILPMNKR 302
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFR 122
I+ + V+ +DANHCPG ++++LF+ +L+TGDFR
Sbjct: 303 FWITDT---------ISVVTLDANHCPG----AIIMLFQEFLANSYDKPIRQILHTGDFR 349
Query: 123 WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
SN + + ++ +D +YLD TY Y FPS+ + + + RL
Sbjct: 350 ---SNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRL 403
>gi|349580422|dbj|GAA25582.1| K7_Pso2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297300|gb|EIW08400.1| Pso2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 661
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 32/177 (18%)
Query: 18 YFLTHLHSDHTQGLSSAWA-------RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
YFL+H HSDH GL +W + L+CS++TA L LKF + + I++L +
Sbjct: 244 YFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSKITAILVNLKF-KIPMDEIQILPMNKR 302
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFR 122
I+ + V+ +DANHCPG ++++LF+ +L+TGDFR
Sbjct: 303 FWITDT---------ISVVTLDANHCPG----AIIMLFQEFLANSYDKPIRQILHTGDFR 349
Query: 123 WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
SN + + ++ +D +YLD TY Y FPS+ + + + RL
Sbjct: 350 ---SNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRL 403
>gi|440640679|gb|ELR10598.1| hypothetical protein GMDG_04870 [Geomyces destructans 20631-21]
Length = 874
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 34/175 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKF---PG--LDLSLIRVLDI 67
+G YFL+H HSDH GL+++W GP++CS++T L + P + L+ +++
Sbjct: 455 QGCNAYFLSHFHSDHYIGLTASWCHGPIYCSKVTGNLVKQQLRVDPKWVITLNFEDKVEV 514
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG--------DFGCLLYTG 119
+ H +SV I ANHCPG S + LF +L+ G
Sbjct: 515 PNTHGVSVT-------------MIPANHCPG----SSLFLFEKVVRKGPNPKVQRILHCG 557
Query: 120 DFRWEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
DFR ++ +V A+ + +D+ YLD TY N Y+FPS++ Q
Sbjct: 558 DFRACPAHVEHPQLMPDIVDAITGKTRQQKIDVCYLDTTYLNPRYSFPSQDEVVQ 612
>gi|322708982|gb|EFZ00559.1| DNA cross-link repair protein pso2/snm1 [Metarhizium anisopliae
ARSEF 23]
Length = 845
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 28/167 (16%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G + YFL+H HSDH GL++ W GP++CS++T L + L + V+++ S
Sbjct: 399 KGCEAYFLSHFHSDHYIGLTANWMHGPIYCSKVTGSLVKQQ---LRTAAKWVVELDFEKS 455
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF----------RGDFGCLLYTGDFR 122
V P +G T V I ANHCPG S + LF RG +L+ GDFR
Sbjct: 456 YDV--PGTGGAT---VTMIPANHCPG----SSLFLFQKPADKYTNRRGKR--ILHCGDFR 504
Query: 123 WEASNERAEIGRNTLVKA----LKDDVVDILYLDNTYCNSSYAFPSR 165
++ + + + A L +DI YLD TY N Y+FP +
Sbjct: 505 ACPAHVTHPLIKPDIQDATTGKLSQQTIDICYLDTTYLNPRYSFPPQ 551
>gi|113676970|ref|NP_001038566.1| protein artemis [Danio rerio]
gi|71153323|sp|Q5RGE5.1|DCR1C_DANRE RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein
Length = 639
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 87/183 (47%), Gaps = 34/183 (18%)
Query: 6 ISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL-------------FCSRLTAKL 49
IS+DR+ ++ YFL+H H DH +GL +GPL +CS +T +L
Sbjct: 14 ISLDRFDRENLHARAYFLSHCHKDHMKGL-----KGPLLKRKLKFSLTVKLYCSYVTKEL 68
Query: 50 FPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLL 107
L P I L++ S SIS++ S+GE V V + A HCPG SVM L
Sbjct: 69 L-LSNPRYAFWEDHIVPLELDSPTSISLIDESTGETEDVVVTLLSAGHCPG----SVMFL 123
Query: 108 FRGDFGCLLYTGDFRWEASN-ERAE-IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
F G G +LYTGDFR + R E + VK ++ +D + D Y Y PSR
Sbjct: 124 FEGAKGTVLYTGDFRLAVGDAARMEYLHSGDRVKDIQSVYIDTTFFDPKY----YQIPSR 179
Query: 166 EVA 168
E
Sbjct: 180 EAC 182
>gi|449548339|gb|EMD39306.1| hypothetical protein CERSUDRAFT_47253 [Ceriporiopsis subvermispora
B]
Length = 505
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD + GS YFLTH HSDH LSS W GP++CS T L + G+D
Sbjct: 84 IAVDAFRYGSIPEITAYFLTHAHSDHYTNLSSNWRSGPIYCSEGTGNLI-VHMLGVDRKW 142
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG----DFGCLLY 117
+R L + + + P +G V V I+ANHCPG S + LF G + G Y
Sbjct: 143 VRPLPM----DVPTIVPDTGG---VSVTLIEANHCPG----SCLFLFEGPQTVNAGDSAY 191
Query: 118 TGD-------FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
FR+ + ++ L +K +D +YLD TY + Y FP +
Sbjct: 192 KSPFVGTKRIFRYLHCGDFRASPQHVLHPCVKGKRLDHVYLDTTYLDPKYCFPPQ 246
>gi|431895428|gb|ELK04944.1| DNA cross-link repair 1A protein [Pteropus alecto]
Length = 1008
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 36/243 (14%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRWEASNERAEIGRNTLVKALKDD 144
V+V+ +DANHCPG +VM+LF G + L+TGDFR + + ER+ L
Sbjct: 752 VKVVLLDANHCPG----AVMILFYLPNGNVTLHTGDFRADPTMERS---------LLAGQ 798
Query: 145 VVDILYLDNTYCNSSYAFPSRE--------VAAQQIWVWPERL---------QTMHLLGF 187
V LYLD TYC+ Y+FPS++ A + + + P L + L
Sbjct: 799 KVHTLYLDTTYCSPEYSFPSQQEVIQFAVNTAFEAVTLNPRTLVVCGTYSIGKEKVFLAI 858
Query: 188 HDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSL 247
D+ +K +++ + +I + SL T ++ LP + KG S +
Sbjct: 859 ADVLGSKVGMSKEKYKTLQCLNIPEINSLITTDMCSSLV-HLLPMMKINFKGLQSHLKTC 917
Query: 248 FSSYQS--KWRATGGTQTEKLKEALGSV--DRFHKYIYSVPYSDHSCFTEIEEFLNLVQP 303
Y +R TG T + KL + + + IY +PYS+HS + E++ F+ ++P
Sbjct: 918 DGRYDQILAFRPTGWTHSNKLTSIADVIPQTKGNIAIYGIPYSEHSSYLEMKRFVQWLKP 977
Query: 304 SNI 306
I
Sbjct: 978 QKI 980
>gi|408400662|gb|EKJ79739.1| hypothetical protein FPSE_00019 [Fusarium pseudograminearum CS3096]
Length = 844
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG-----LDLSLIRVLDI 67
+G + YFL+H HSDH GL++ W GP++CS++T L + ++L + DI
Sbjct: 401 QGCKAYFLSHFHSDHYIGLTARWCHGPIYCSKVTGSLVKNQLRTAAKWVVELEFDKPYDI 460
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTG 119
+V I ANHCPG S + LF +L+ G
Sbjct: 461 PGTEGATVT-------------MIPANHCPG----SSLFLFEKTMKQGSNSRVQRILHCG 503
Query: 120 DFRWEASNERAEIGRNTLVKA----LKDDVVDILYLDNTYCNSSYAFPSR 165
DFR ++ + + + +V + +K +DI YLD TY N Y+FP +
Sbjct: 504 DFRACPAHVKHPLLKPDIVDSISGKIKQQKIDICYLDTTYLNPKYSFPPQ 553
>gi|428170906|gb|EKX39827.1| hypothetical protein GUITHDRAFT_76035 [Guillardia theta CCMP2712]
Length = 317
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 52/302 (17%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
Y L+H H+DH GL + G ++C+ +TA+L LK + + + H ++V
Sbjct: 38 YILSHFHADHYAGLRKKFNSGKIYCTPVTARLVKLK-----------IGVSADHLVAVAY 86
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG-DFGCLLYTGDFRWEAS-NERAEIGRN 135
S V + ANHCPG S ++LF D C L+TGDFR+ +E +
Sbjct: 87 HSPLLIEGTRVTFLPANHCPG----SALILFETPDGKCHLHTGDFRFHPKFSEDPVLSSF 142
Query: 136 TLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIW------VWPERLQTMHLLGFHD 189
T + K +D L+LD TYC+ + FP++E A + + + R +T+ L+G +
Sbjct: 143 TSTGSRK---IDHLFLDTTYCSPEHEFPAQEDAIRFVGELVKSNAFANR-ETLFLVGSYT 198
Query: 190 IFTTKTSLTRVRAV-------PRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGS 242
I + L R P ++ LE + + V P+ G
Sbjct: 199 IGKEEVFLQAARESGCKLYVHPAKKKVLECLELKEEDQQRLTTVAHEARLHVVPM---GC 255
Query: 243 LPGSLFSSY----QSKW------RATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFT 292
+ S+Y + K+ R TG T + ++ G + IY VPYS+HS F+
Sbjct: 256 INFKQMSAYLGMAKGKYKTVVGIRPTGWTFSGGPRQERGPL-----VIYGVPYSEHSSFS 310
Query: 293 EI 294
EI
Sbjct: 311 EI 312
>gi|346324358|gb|EGX93955.1| DNA cross-link repair protein [Cordyceps militaris CM01]
Length = 845
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG-----LDLSLIRVLDI 67
EG + YFL+H HSDH GL++ W GP++CS++T L + ++L + D+
Sbjct: 401 EGCKAYFLSHFHSDHYIGLTARWVHGPIYCSKVTGSLVRNQLRTAAKWVVELEFDKEYDV 460
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTG 119
+ G K V I ANHCPG S + +F G +L+ G
Sbjct: 461 PG---------TDGAK----VTMIPANHCPG----SSLFVFEKTVGERHNKSLKRILHCG 503
Query: 120 DFRWEASNERAEIGRNTLVKA----LKDDVVDILYLDNTYCNSSYAFPSR 165
DFR + + + R A LK +DI YLD TY N Y+FP +
Sbjct: 504 DFRACPDHVQHPLLRPDTADAISGKLKRQKIDICYLDTTYLNPRYSFPPQ 553
>gi|169849883|ref|XP_001831640.1| DNA cross-link repair protein pso2/snm1 [Coprinopsis cinerea
okayama7#130]
gi|116507278|gb|EAU90173.1| DNA cross-link repair protein pso2/snm1 [Coprinopsis cinerea
okayama7#130]
Length = 738
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 78/171 (45%), Gaps = 39/171 (22%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G YFLTH HSDH LSS+W GP++CS TA L + +D ++ L + +
Sbjct: 339 GVTAYFLTHAHSDHYTNLSSSWKHGPIYCSEGTANLI-VHMLSVDRKWVKPLPM---DTP 394
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------------------- 114
+V+ + G V V I+ANHCPG S + LF G
Sbjct: 395 TVIPDTQG----VIVTLIEANHCPG----SCLFLFEGRQTVNAGDTTFKSAYVGSPRTFR 446
Query: 115 LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
L+ GDFR ++ L A+K V+D +YLD TY + Y FP +
Sbjct: 447 YLHCGDFRASP--------QHVLHPAVKGKVIDHVYLDTTYLDPKYTFPPQ 489
>gi|402218716|gb|EJT98792.1| DRMBL-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 648
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 86/183 (46%), Gaps = 33/183 (18%)
Query: 1 MEKGLISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M+ I+VD + G Y LTH HSDH LSS+W GP++CS TA L
Sbjct: 171 MQGMPIAVDAFRYGKIPGVTAYCLTHAHSDHYTNLSSSWKHGPIYCSSTTANLI-----K 225
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKT-FVEVIAIDANHCPGILGCSVMLLFRGDFGCL 115
L+LS+ H + + +P++ T V+VI ++ANHCPG SV+ LF G
Sbjct: 226 LNLSVAPEY----VHPLPLNTPTTLPNTGGVQVILLEANHCPG----SVLFLFIGRQ--T 275
Query: 116 LYTGD-------------FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAF 162
+ GD FR+ + + L +K +D++YLD TY N Y F
Sbjct: 276 VNAGDSPISSPFVGSQRTFRYLHCGDFRACPAHALHPEIKGKKLDLVYLDTTYLNPRYCF 335
Query: 163 PSR 165
P +
Sbjct: 336 PPQ 338
>gi|159479866|ref|XP_001698007.1| hypothetical protein CHLREDRAFT_176829 [Chlamydomonas reinhardtii]
gi|158273806|gb|EDO99592.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1384
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 92/217 (42%), Gaps = 70/217 (32%)
Query: 4 GLISVDRWT---EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
G ++VD + G + YFLTH HSDH GLS AW GP++CS LTA+L G+ +
Sbjct: 46 GAVTVDAFRYAHPGVKAYFLTHAHSDHYTGLSEAWCAGPVYCSELTARLV-AHLTGVSTA 104
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR----------- 109
+R L +G + + VEV +DANHCPG +V LLFR
Sbjct: 105 WLRPLPLGRPVVV---------EGLVEVTLVDANHCPG----AVQLLFRVLPRGGGGGAA 151
Query: 110 -------------------------GDFGC--------LLYTGDFRWEASNER-AEIGRN 135
D GC L+ GD R+ + + ++G
Sbjct: 152 GGGAGGVGGVDATDAAKSAGGSTRGADAGCSSGAGAVRYLHCGDMRYSPAMQSWPQLG-- 209
Query: 136 TLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
A + + ++LD TYC + FP+++ A +
Sbjct: 210 ----AWRG--CEGVFLDTTYCQPKHTFPTQDEAVDYV 240
>gi|392589814|gb|EIW79144.1| DRMBL-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 468
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 83/179 (46%), Gaps = 31/179 (17%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD + G+ YFLTH HSDH LSS+W GP++CS TA L + +D
Sbjct: 49 IAVDAFRYGTIPNVTAYFLTHAHSDHYTNLSSSWKSGPIYCSEGTANLI-IHMLSVDRKW 107
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD- 120
+ L + + V P +G V V I+ANHCPG S + LF G + GD
Sbjct: 108 VHPLPMDT----PVEVPDTGG---VTVTLIEANHCPG----SCLFLFEGR--QTVNAGDS 154
Query: 121 ------------FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
FR+ + R+ + A+K +D +YLD TY + Y FP + +
Sbjct: 155 AFRSHFVGTQRVFRYLHCGDFRASPRHVMHPAVKGKPLDTVYLDTTYLDPKYTFPPQAM 213
>gi|432944132|ref|XP_004083338.1| PREDICTED: protein artemis-like [Oryzias latipes]
Length = 639
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 92/183 (50%), Gaps = 35/183 (19%)
Query: 9 DRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRL----TAKLFPLKFPGLDLSL--- 61
DR ++ YFL+H H DH +GL +GPL +L T +L+ F +L L
Sbjct: 20 DRENLHARAYFLSHCHKDHMKGL-----KGPLLKRKLQFSRTVRLY-CSFVTKELLLNNQ 73
Query: 62 --------IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG 113
I L++ S IS+V +SGEK V V + A HCPG SVM LF G G
Sbjct: 74 KYSFWEEYIVPLELESPTQISLVDEASGEKEEVVVTLLPAGHCPG----SVMFLFEGCRG 129
Query: 114 CLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPSREVAA 169
+LYTGDFR ++ R L+ + +KD + +Y+D+T+ + Y PSREV
Sbjct: 130 NVLYTGDFRLAV----GDVARMELLHSGSRVKD--IQSVYVDSTFYDPRFYQIPSREVCL 183
Query: 170 QQI 172
+ I
Sbjct: 184 KGI 186
>gi|444317116|ref|XP_004179215.1| hypothetical protein TBLA_0B08800 [Tetrapisispora blattae CBS 6284]
gi|387512255|emb|CCH59696.1| hypothetical protein TBLA_0B08800 [Tetrapisispora blattae CBS 6284]
Length = 676
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 28/171 (16%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKF----PGLDLSLIRVLDIGSWHSI 73
YFL+H HSDH G+ +W G ++CS++TA L KF D + + + +
Sbjct: 271 YFLSHFHSDHYIGMKKSWRNGVVYCSQITANLLRNKFNIPITNYDYDEMERSEEEAKEDV 330
Query: 74 SVVSPSSGEKTF-----VEVIAIDANHCPGILGCSVMLLFR---GDFG----CLLYTGDF 121
+ + + + VI IDANHCPG +V+ LF+ D +L+TGDF
Sbjct: 331 MEIVELPMNRPYWINKNISVILIDANHCPG----AVIFLFQQYSDDLTRIEYQILHTGDF 386
Query: 122 RWEASNERAEIGRNTLVKALKD--DVVDILYLDNTYCNSSYAFPSREVAAQ 170
R+ SNE E+ ++K L D +D +YLD TY + Y FP ++ Q
Sbjct: 387 RY--SNE-MELN---ILKYLPDYNKKIDEIYLDTTYISPMYNFPLQQNVLQ 431
>gi|22023549|gb|AAM89119.1|AF387731_1 SNM1-like protein [Mus musculus]
Length = 705
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 155/379 (40%), Gaps = 74/379 (19%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVFLYCSPV 64
Query: 46 TAKLFPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P + I ++I + IS+V +SGE+ V V + HCP S
Sbjct: 65 TKELL-LTSPKYRFWENRIITIEIETPTQISLVDEASGEQEQVGVTLLPPGHCPR----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
+ LF+G G +LYTGDFR + E R L+ + +KD + +YLD T+C+
Sbjct: 120 XVFLFQGSNGTVLYTGDFRL----AKGEASRMELLHSGGRVKD--IQSVYLDTTFCDPRF 173
Query: 160 YAFPSREVAAQQI------W--------VWPERLQTMHLLGFHDIFTTKTS----LTRVR 201
Y PSRE + I W VW L G+ +FT + V
Sbjct: 174 YQIPSREQCLRGILELVRSWVTRSPHHVVW---LNCKAAYGYEYLFTNLSEELGVQVHVD 230
Query: 202 AVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG-- 259
+ + D L L T T I P + + LP + S ++
Sbjct: 231 KLDMFKNMPDILHHLTTDRNT-QIHACRHPKAEECFQ-WNKLPCGITSQNKTALHTISIK 288
Query: 260 ------GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSS 313
G +T K + R + Y +S HS F+EI++FL+ + P N+ V
Sbjct: 289 PSTMWFGERTRK----TNVIVRTGESSYRACFSFHSSFSEIKDFLSYICPVNVYPNVIPV 344
Query: 314 SCYVDPLY-YFGRLCRANQ 331
VD + LCR+ Q
Sbjct: 345 GLTVDKVMDVLKPLCRSPQ 363
>gi|342874373|gb|EGU76387.1| hypothetical protein FOXB_13065 [Fusarium oxysporum Fo5176]
Length = 849
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG-----LDLSLIRVLDI 67
+G + YFL+H HSDH GL++ W GP++CS++T L + ++L + DI
Sbjct: 406 QGCKAYFLSHFHSDHYIGLTARWCHGPIYCSKVTGSLVRNQLRTAAKWVVELEFDKSYDI 465
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTG 119
+ G K V I ANHCPG S + LF +L+ G
Sbjct: 466 PG---------TEGAK----VTMIPANHCPG----SSLFLFEKTMKQDPNSRVQRILHCG 508
Query: 120 DFRWEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
DFR ++ + + + + A+ K +DI YLD TY N Y+FP +
Sbjct: 509 DFRACPAHVKHPLLKPETIDAISGKAKQQKIDICYLDTTYLNPRYSFPPQ 558
>gi|92096533|gb|AAI15305.1| Dclre1c protein [Danio rerio]
Length = 639
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 87/183 (47%), Gaps = 34/183 (18%)
Query: 6 ISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL-------------FCSRLTAKL 49
IS+DR+ ++ YFL+H H DH +GL +GPL +CS +T +L
Sbjct: 14 ISLDRFDRENLHARAYFLSHCHKDHMKGL-----KGPLLKRKLKFSLTVKLYCSYVTKEL 68
Query: 50 FPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLL 107
L P I L++ S +IS++ S+GE V V + A HCPG SVM L
Sbjct: 69 L-LSNPRYAFWEDHIVPLELDSPTNISLIDESTGETEDVVVTLLSAGHCPG----SVMFL 123
Query: 108 FRGDFGCLLYTGDFRWEASN-ERAE-IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
F G G +LYTGDFR + R E + VK ++ +D + D Y Y PSR
Sbjct: 124 FEGAKGTVLYTGDFRLAVGDAARMEYLHSGDRVKDIQSVYIDTTFFDPKY----YQIPSR 179
Query: 166 EVA 168
E
Sbjct: 180 EAC 182
>gi|443695471|gb|ELT96369.1| hypothetical protein CAPTEDRAFT_147464 [Capitella teleta]
Length = 265
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 92/180 (51%), Gaps = 24/180 (13%)
Query: 2 EKGLISVDRW---TEGSQVYFLTHLHSDHTQGLS--------SAWARGPLFCSRLTAKL- 49
E LIS+DR+ S YFL+H H+DH GLS S+ L+CS +T L
Sbjct: 10 EYDLISLDRFDGVNMQSSAYFLSHKHADHMLGLSNSSFAYRLSSNKNIRLYCSPVTKALL 69
Query: 50 -FPLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
F ++ GL + I LD+ + + + +P S +K V V + A HCPG SVM LF
Sbjct: 70 SFDSRYSGL-MPFIVALDLDVPNVLRINNPQS-DKYEVTVTLLSAAHCPG----SVMFLF 123
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKAL-KDDVVDILYLDNTYCNSSYAF-PSRE 166
G+ G +LYTGDFR + + + L +A K + LY+D T+C F PSR+
Sbjct: 124 EGNQGTVLYTGDFRLCVQD---VMQMDALHQAPGKPKTLTSLYIDTTFCVPQALFIPSRQ 180
>gi|365763857|gb|EHN05383.1| Pso2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 661
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 32/177 (18%)
Query: 18 YFLTHLHSDHTQGLSSAWA-------RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
YFL+H HSDH GL +W + L+CS +TA L LKF + + I++L +
Sbjct: 244 YFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSXITAILVNLKF-KIPMDEIQILPMNKR 302
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFR 122
I+ + V+ +DANHCPG ++++LF+ +L+TGDFR
Sbjct: 303 FWITDT---------ISVVTLDANHCPG----AIIMLFQEFLANSYDKPIRQILHTGDFR 349
Query: 123 WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
SN + + ++ +D +YLD TY Y FPS+ + + + RL
Sbjct: 350 ---SNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRL 403
>gi|378733176|gb|EHY59635.1| non-specific serine/threonine protein kinase [Exophiala
dermatitidis NIH/UT8656]
Length = 959
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 26/167 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H HSDH GL+S+W GP++ S++T L + +D + L+
Sbjct: 511 EGQNAYFLSHFHSDHYIGLTSSWCHGPIYASKVTCNLMVQQL-KVDPKWVVPLEF----E 565
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC----------LLYTGDFR 122
V P++ V V I ANHCPG S + LF G +L+ GDFR
Sbjct: 566 KKVEVPNT---KGVYVTMIPANHCPG----SSLYLFEKVVGKNKDGSPRLTRILHCGDFR 618
Query: 123 WEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSR 165
++ + R +V ++ K ++D YLD TY Y+FPS+
Sbjct: 619 ACPAHVTHPLLRPDVVDSITGQTKQQIIDTCYLDTTYLTPKYSFPSQ 665
>gi|400602726|gb|EJP70328.1| DNA repair metallo-beta-lactamase [Beauveria bassiana ARSEF 2860]
Length = 842
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 34/175 (19%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG-----LDLSLIRVLDI 67
EG + YFL+H HSDH GL++ W GP++CS++T L + ++L + D+
Sbjct: 398 EGCKAYFLSHFHSDHYIGLTATWTHGPIYCSKVTGSLVRNQLRTAAKWVVELEFDKEYDV 457
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTG 119
+ G K V I ANHCPG S + +F G +L+ G
Sbjct: 458 PG---------TDGAK----VTMISANHCPG----SSLFVFEKVVGERHNKSLKRILHCG 500
Query: 120 DFRWEASNERAEIGR----NTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
DFR + + + R +++ L+ +DI YLD TY N Y+FP + Q
Sbjct: 501 DFRACPDHVQHPLLRPDVADSVSGKLRRQKIDICYLDTTYLNPRYSFPPQNDVIQ 555
>gi|322693286|gb|EFY85152.1| DNA repair protein Pso2/Snm1, putative [Metarhizium acridum CQMa
102]
Length = 844
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G + YFL+H HSDH GL++ W GP++CS++T L + G + LD +
Sbjct: 398 KGCEAYFLSHFHSDHYIGLTANWMHGPIYCSKVTGSLVKQQL-GTAAKWVVELDFEKSYD 456
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR--GDFGC------LLYTGDFRWE 124
+ P + T V I ANHCPG S + LF+ D +L+ GDFR
Sbjct: 457 V----PGTVGAT---VTMIPANHCPG----SSLFLFQKPADNNTNSRGKRILHCGDFRAC 505
Query: 125 ASNE-----RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
++ + +I ++ + L +DI YLD TY N Y+FP +
Sbjct: 506 PAHVTHPLIKPDI-QDAITGKLSQQTIDICYLDTTYLNPRYSFPPQ 550
>gi|392565356|gb|EIW58533.1| DRMBL-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 486
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 84/177 (47%), Gaps = 27/177 (15%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
ISVD + G+ YFLTH HSDH LS+ W GP++CS TA L + +D
Sbjct: 60 ISVDAFRYGAIPNCTAYFLTHAHSDHYTNLSANWKHGPIYCSPGTANLI-IHMLKVDPKW 118
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG----DFGCLLY 117
+ L + +V+S + G VEV I+ANHCPG S + LF G + G Y
Sbjct: 119 VHPLPM---DVPTVISNTGG----VEVTLIEANHCPG----SCLFLFEGKQTVNGGDSAY 167
Query: 118 TGD-------FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
FR+ + ++ L A+K +D +YLD TY + Y FP + +
Sbjct: 168 KSPFVGSPRIFRYLHCGDFRACPKHILHPAVKGKHLDHVYLDTTYLDPKYCFPPQPL 224
>gi|323303509|gb|EGA57302.1| Pso2p [Saccharomyces cerevisiae FostersB]
Length = 661
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 32/177 (18%)
Query: 18 YFLTHLHSDHTQGLSSAWA-------RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
YFL+H HSDH GL +W + L+CS +TA L LKF + + I++L +
Sbjct: 244 YFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSXITAILVNLKF-KIPMDEIQILPMNKR 302
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFR 122
I+ + V+ +DANHCPG ++++LF +L+TGDFR
Sbjct: 303 FWITDT---------ISVVTLDANHCPG----AIIMLFXEFLANSYDKPIRQILHTGDFR 349
Query: 123 WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
SN + + ++ +D +YLD TY Y FPS+ + + + RL
Sbjct: 350 ---SNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRL 403
>gi|340053163|emb|CCC47450.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 698
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 87/179 (48%), Gaps = 28/179 (15%)
Query: 10 RWTEGSQV-YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFP-------GLDLSL 61
+W Q+ +FL+H HSDH G++S W+ G ++ SR TA + K LD S+
Sbjct: 63 QWPHALQIIFFLSHFHSDHYAGITSRWSHGTIYASRATANMLCWKLEVEKQCVVPLDYSV 122
Query: 62 IR--VLDIGSW---HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGD-FGCL 115
L+ G + + + V + A+HCPG S M LFR FG +
Sbjct: 123 PYQFCLETGKLVQGEEAAGLEAKHCDTNCFSVTLLPADHCPG----SAMFLFRSPVFGTV 178
Query: 116 LYTGDFRWE---ASNERAEIGRN-----TLVKALKD--DVVDILYLDNTYCNSSYAFPS 164
L+TGDFR+ + RA R+ TL++A VD L+LDNT+C+ + FPS
Sbjct: 179 LHTGDFRFSRNPPTVPRALCSRSGSSTPTLLEAATPLAGKVDRLFLDNTFCSPEFDFPS 237
>gi|320167046|gb|EFW43945.1| ATP dependent DNA ligase [Capsaspora owczarzaki ATCC 30864]
Length = 1559
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 31/168 (18%)
Query: 1 MEKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
++ G+ +++ + ++FL+H H+DH GL+ W +RL K+ +D
Sbjct: 91 LDDGIAAMEPHSHSGPLFFLSHFHADHYAGLTKTWR-----AARLVIKVL-----EVDER 140
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTG 119
+IR L+ + +I V+V +DANHCPG + M+LF+ G + L+TG
Sbjct: 141 MIRPLEFNTPVTID----------NVQVTLMDANHCPG----AAMMLFKVSNGLVYLHTG 186
Query: 120 DFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
DFR+ L++A + ++ L+LD TYCN Y P+++
Sbjct: 187 DFRYHPRMN----DYPALIQA--QNQIETLFLDTTYCNPKYTLPAQDA 228
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 261 TQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
T + +K +L D +YS+PYS+HS FTE+ +F++ + P I
Sbjct: 393 TSAKGVKYSLEQRDNIQ--VYSIPYSEHSSFTELRQFVSFLHPKRI 436
>gi|157129880|ref|XP_001661798.1| DNA cross-link repair protein pso2/snm1 [Aedes aegypti]
gi|108872037|gb|EAT36262.1| AAEL011626-PA [Aedes aegypti]
Length = 778
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 29/156 (18%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFL+H H+DH GL ++A+ PL S +T++L F ++ S +++D+ H
Sbjct: 381 EGVSHYFLSHFHADHYIGLKRSFAK-PLIMSPITSRLVKA-FINVEESYYQLIDL---HE 435
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAE 131
V+ V + A+DANHCPG +VM LF+ G +L+TGDFR AS+E E
Sbjct: 436 TIVID-------NVRITALDANHCPG----AVMFLFQLPTGTNILHTGDFR--ASSEMEE 482
Query: 132 IGR--NTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
N + + +YLD TY +S YAF S+
Sbjct: 483 YPEFWNMEIHS--------IYLDTTYLSSKYAFKSQ 510
>gi|255086367|ref|XP_002509150.1| predicted protein [Micromonas sp. RCC299]
gi|226524428|gb|ACO70408.1| predicted protein [Micromonas sp. RCC299]
Length = 671
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 140/342 (40%), Gaps = 102/342 (29%)
Query: 18 YFLTHLHSDHTQGLS-SAWARGPL-FCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
+FLTH H+DH +GL+ S G L +CSR TA+L + G+ +R +D+G +I V
Sbjct: 347 WFLTHFHADHYRGLTKSTPPPGCLVWCSRPTAELCASRL-GIQRDRLRAVDVG--RTIVV 403
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG-DFGCLLYTGDFRWEASNERAEIGR 134
V IDANHCPG +VM++F G G +L TGD R+ +
Sbjct: 404 DG--------VRCTFIDANHCPG----AVMIVFDGIPAGPVLATGDCRYHPG-----MKT 446
Query: 135 NTLVKALKDDVVDILYLDNTYCNSSYAFPSR-EVAA------------------------ 169
+ + AL ++ LD TYC+ ++ FP + EV A
Sbjct: 447 DPTLAALASRRPAVM-LDTTYCSPAHVFPPQCEVLAAVRDAVKAESFNPRVLFLFGTYTI 505
Query: 170 --------------QQIWVWPERLQTMHLLGF------HDIFTTKTSLTRVRAVPRYSFS 209
++++V ++++ + LG D+ T T + VP S S
Sbjct: 506 GKERVFFEAAKALGKKVYVGKQKMKVLDALGSAIDDADRDMITADDQATNLHVVPMGSTS 565
Query: 210 IDTLESL-----NTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTE 264
++++ N + P+G W F + + RAT TQ
Sbjct: 566 FGRMKTILRYYKNRYDTIVAFKPTG--WT--------------FEAAKKHARATKRTQRG 609
Query: 265 KLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
+ + YSVPYS+HS F E+ F+ ++P +
Sbjct: 610 AMIQ------------YSVPYSEHSSFDELRAFVKFLKPRAV 639
>gi|198419249|ref|XP_002126836.1| PREDICTED: similar to DNA cross-link repair 1C, PSO2 homolog (S.
cerevisiae) isoform 1 [Ciona intestinalis]
Length = 395
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 140/345 (40%), Gaps = 62/345 (17%)
Query: 5 LISVDRW---TEGSQVYFLTHLHSDHTQGLSSAWARGPLFC--------SRLTAKL---- 49
+S+DR+ GS +FL+H H+DH GL+ + L C S +T L
Sbjct: 13 FLSIDRFDGENLGSFSFFLSHCHTDHMVGLTHEAFKYKLKCQPDVKLFTSEVTKCLLLAD 72
Query: 50 --FPLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLL 107
F P +++ LI V + + S+V + V + A HCPG SVM L
Sbjct: 73 EKFLFLLPNIEVLLIEVPKLLRIKTKSIVEE-------LTVTLLPAGHCPG----SVMFL 121
Query: 108 FRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYC-NSSYAFPSRE 166
F G G +LYTGDFR S+ + + LK+ V+D +Y+D T+C ++ P RE
Sbjct: 122 FEGAEGTMLYTGDFRLSHSSA-------SRMPCLKNKVIDHIYVDTTFCIEEAWYIPPRE 174
Query: 167 VAAQ------QIWV-----WPERLQTMHLLGF-------HDIFTTKTSLTRVR---AVPR 205
+ + Q W+ + RL G+ H F K +R + +P
Sbjct: 175 LCVKNLLKIVQQWIVRGNQYVVRLNMSAKYGYEYLIEELHKSFGEKIYCSRAKNYDCLPN 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ + T + + + G W K +F + Q
Sbjct: 235 IASILTTDPTCSHIFVCYKTEILGNQW-----KASKMDVADMFKNVQWLTINLSTMYFTN 289
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
+EA + +K Y + +S HS +EI FL ++P++I V
Sbjct: 290 CEEAHVVEVQTNKQCYRLCFSFHSSLSEICSFLRQIKPTHIHANV 334
>gi|410214256|gb|JAA04347.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 692
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 92/182 (50%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H H +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARPYFLSHCHKGHMKGLRAPTLKRRLECSLEVYLYCSPVTKELL 69
Query: 51 --PLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
K+ +I + +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 LTSRKYRFWKKQIISI-EIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----VQGEAARMELLHSGGRVKD--IQSVYLDTMLCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|198419247|ref|XP_002126890.1| PREDICTED: similar to DNA cross-link repair 1C, PSO2 homolog (S.
cerevisiae) isoform 2 [Ciona intestinalis]
Length = 403
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 140/345 (40%), Gaps = 62/345 (17%)
Query: 5 LISVDRW---TEGSQVYFLTHLHSDHTQGLSSAWARGPLFC--------SRLTAKL---- 49
+S+DR+ GS +FL+H H+DH GL+ + L C S +T L
Sbjct: 13 FLSIDRFDGENLGSFSFFLSHCHTDHMVGLTHEAFKYKLKCQPDVKLFTSEVTKCLLLAD 72
Query: 50 --FPLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLL 107
F P +++ LI V + + S+V + V + A HCPG SVM L
Sbjct: 73 EKFLFLLPNIEVLLIEVPKLLRIKTKSIVEE-------LTVTLLPAGHCPG----SVMFL 121
Query: 108 FRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYC-NSSYAFPSRE 166
F G G +LYTGDFR S+ + + LK+ V+D +Y+D T+C ++ P RE
Sbjct: 122 FEGAEGTMLYTGDFRLSHSSA-------SRMPCLKNKVIDHIYVDTTFCIEEAWYIPPRE 174
Query: 167 VAAQ------QIWV-----WPERLQTMHLLGF-------HDIFTTKTSLTRVR---AVPR 205
+ + Q W+ + RL G+ H F K +R + +P
Sbjct: 175 LCVKNLLKIVQQWIVRGNQYVVRLNMSAKYGYEYLIEELHKSFGEKIYCSRAKNYDCLPN 234
Query: 206 YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEK 265
+ + T + + + G W K +F + Q
Sbjct: 235 IASILTTDPTCSHIFVCYKTEILGNQW-----KASKMDVADMFKNVQWLTINLSTMYFTN 289
Query: 266 LKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
+EA + +K Y + +S HS +EI FL ++P++I V
Sbjct: 290 CEEAHVVEVQTNKQCYRLCFSFHSSLSEICSFLRQIKPTHIHANV 334
>gi|357508239|ref|XP_003624408.1| DNA ligase [Medicago truncatula]
gi|355499423|gb|AES80626.1| DNA ligase [Medicago truncatula]
Length = 1498
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 82/170 (48%), Gaps = 37/170 (21%)
Query: 12 TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
T S YFL+H HSDH LSS+W+ G +FCS +T+ L LI +L I S
Sbjct: 63 TPSSFTYFLSHFHSDHYSPLSSSWSHGIIFCSPITSHL-----------LINILHIPS-- 109
Query: 72 SISVVSPSSGEKTFV----EVIAIDANHCPGILGCSVMLLFR---GDFGCLLYTGDFRWE 124
V P S ++ V V IDANHCPG +V LF+ + ++TGDFR+
Sbjct: 110 --PFVHPLSLNQSVVIDGSVVTLIDANHCPG----AVQFLFKVNETESPRYVHTGDFRF- 162
Query: 125 ASNERAEIGRNTLVKALKDDVV--DILYLDNTYCNSSYAFPSREVAAQQI 172
R L+ + + D ++LD TYC+ + FP++ + I
Sbjct: 163 --------NREMLLDLNLGEFIGADAVFLDTTYCHPKFVFPTQNESVDYI 204
>gi|410918675|ref|XP_003972810.1| PREDICTED: LOW QUALITY PROTEIN: protein artemis-like [Takifugu
rubripes]
Length = 649
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 93/193 (48%), Gaps = 38/193 (19%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL +GP L+CS +
Sbjct: 10 EYPTISLDRFDRENLHARAYFLSHCHKDHMKGL-----KGPALKRKLQFSRTVRLYCSFV 64
Query: 46 TAKLFPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P L++ S IS+V ++GEK + V + A HCPG S
Sbjct: 65 TKELL-LSSPRYAFWEEYTVPLELESPTQISLVEETTGEKEDLVVTLLSAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
VM LF G G +LYTGDFR A +I R + + +KD + +YLD+T+ +
Sbjct: 120 VMFLFEGSQGTVLYTGDFRISA----GDISRMEHLHSGSRVKD--IQSIYLDSTFYDPRF 173
Query: 160 YAFPSREVAAQQI 172
Y P+RE I
Sbjct: 174 YRIPTRETCLNGI 186
>gi|410290018|gb|JAA23609.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 692
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 92/181 (50%), Gaps = 26/181 (14%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H H +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARPYFLSHCHKGHMKGLRAPTLKRRLECSLEVYLYCSPVTKELL 69
Query: 51 --PLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
K+ +I + +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 LTSRKYRFWKKQIISI-EIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDI--LYLDNTYCNSS-YAFPSR 165
+G+ G +LYTGDFR + E R L+ + + V DI +YLD C+ Y PSR
Sbjct: 125 QGNNGTVLYTGDFRL----VQGEAARMELLYS-RGRVKDIQSVYLDTMLCDPRFYQIPSR 179
Query: 166 E 166
E
Sbjct: 180 E 180
>gi|307193937|gb|EFN76517.1| Artemis protein [Harpegnathos saltator]
Length = 387
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 144/345 (41%), Gaps = 70/345 (20%)
Query: 6 ISVDRW---TEGSQVYFLTHLHSDHTQGLSSAWAR------GPLFCSRLTAKLFPLKFPG 56
ISVDR+ S YFL+H H+DH GL+ + L+CS ++ ++ P
Sbjct: 14 ISVDRFDGENLSSSAYFLSHCHTDHMIGLNHEFFAHLQQFDKYLYCSSISKQILNANCPN 73
Query: 57 LDLSLIRVLDIGSWHSISV-VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL 115
+ V DI ++V SGE + V I A HCPG SVM LF D +
Sbjct: 74 M-----YVKDIEVDKRVAVEYKNGSGETDILFVTCISAGHCPG----SVMFLFERDDKLI 124
Query: 116 LYTGDFRWEASN------ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYA-FPSREVA 168
LYTGDFR + + G L K L +YLD T+ N ++A FP+R+ +
Sbjct: 125 LYTGDFRINSLDLPKLRSLHFRSGSKVLPKKLTK-----VYLDTTFFNPNFATFPTRKES 179
Query: 169 AQQI------WVWPER-----LQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSI------- 210
I W+ L+ L G +F L++ +P + +I
Sbjct: 180 VSMICNIIKNWLTKSPRHAVILECSALYGSEFLF---MELSKFLNIPVHVRNIVFPNLCR 236
Query: 211 --DTLESLNT------MHPTIGIMPSGLPWVVKPLKGGGSLPG-SLFSSYQSKWRATGGT 261
D + T +H +G M GL +K +P ++ + S ++ G
Sbjct: 237 ISDLRPHVTTDPYATPIHACMGKMECGLGL----MKCRSDIPQENVLTIVASAYKWEG-- 290
Query: 262 QTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
K +G+ D + +++ YS HS F E++ F+ +P +I
Sbjct: 291 ---KDTSVIGAWDSAKERTFNICYSTHSSFEELQAFIQYFKPEDI 332
>gi|410248332|gb|JAA12133.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 692
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 92/182 (50%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H H +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARPYFLSHCHKGHMKGLRAPTLKRRLECSLEVYLYCSPVTKELL 69
Query: 51 --PLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
K+ +I + +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 LTSRKYRFWKKQIISI-EIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----VQGEAARMELLYSGGRVKD--IQSVYLDTMLCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|410337689|gb|JAA37791.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 692
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 92/182 (50%), Gaps = 28/182 (15%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H H +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARPYFLSHCHKGHMKGLRAPTLKRRLECSLEVYLYCSPVTKELL 69
Query: 51 --PLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
K+ +I + +I + IS+V +SGEK + V + A HCPG SVM LF
Sbjct: 70 LTSRKYRFWKKQIISI-EIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----SVMFLF 124
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPS 164
+G+ G +LYTGDFR + E R L+ + +KD + +YLD C+ Y PS
Sbjct: 125 QGNNGTVLYTGDFRL----VQGEAARMELLYSGGRVKD--IQSVYLDTMLCDPRFYQIPS 178
Query: 165 RE 166
RE
Sbjct: 179 RE 180
>gi|388582449|gb|EIM22754.1| DRMBL-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 546
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 84/180 (46%), Gaps = 31/180 (17%)
Query: 1 MEKGLISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
+E I+VD + G + Y L+H HSDH Q LS W GP++CS +TA L G
Sbjct: 114 LEGMPIAVDAFMSGKIPGVEAYVLSHAHSDHYQSLSKNWDAGPIYCSIITASLVH-HICG 172
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
+ +R L + H V+ ++G V V IDANHCPG S + +F G +
Sbjct: 173 VPKEYLRPLSNDTAH---VIPSTNG----VTVTLIDANHCPG----SSIFVFEGKQS--V 219
Query: 117 YTGD-------------FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFP 163
+ GD FR+ + ++ A+K D +YLD TY N +Y+FP
Sbjct: 220 HAGDSNFKSPWIGSDRIFRYLHCGDFRASPQHVNHPAIKGKKFDAVYLDTTYLNPNYSFP 279
>gi|322801376|gb|EFZ22037.1| hypothetical protein SINV_01264 [Solenopsis invicta]
Length = 715
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 28/183 (15%)
Query: 6 ISVDRW---TEGSQVYFLTHLHSDHTQGLSSAWARGP------LFCSRLTAKLFPLKFPG 56
ISVDR+ + S YFL+H H+DH QGLS + L+CSR++ ++ G
Sbjct: 19 ISVDRFDGKNKYSSAYFLSHCHTDHMQGLSQTFFEDLKQYNKFLYCSRISKVFLDARYYG 78
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
++ V DI + + ++G T + V I A HCPG SVM LF +L
Sbjct: 79 IETC---VKDIDIDERVLIEYKNNGYNTNLFVTCISAGHCPG----SVMFLFEKMDKLIL 131
Query: 117 YTGDFRWEASNERAEIGR------NTLVKALKDDVVDILYLDNTYCNSSY-AFPSREVAA 169
YTGDFR + + + NT K +YLD T+ + ++ FP+R+ +
Sbjct: 132 YTGDFRINPRDYKKIVSLHYCNDFNTFPKKFAK-----MYLDTTFLDYNFIVFPTRKESI 186
Query: 170 QQI 172
++
Sbjct: 187 NKM 189
>gi|46105466|ref|XP_380537.1| hypothetical protein FG00361.1 [Gibberella zeae PH-1]
Length = 845
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 34/170 (20%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG-----LDLSLIRVLDI 67
+G + YFL+H HSDH GL++ W G ++CS++T L + ++L + DI
Sbjct: 402 QGCKAYFLSHFHSDHYIGLTARWCHGSIYCSKVTGSLVKNQLRTAAKWVVELEFDKPYDI 461
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTG 119
+V I ANHCPG S + LF +L+ G
Sbjct: 462 PGTEGATVT-------------MIPANHCPG----SSLFLFEKTMKQGANSRVQRILHCG 504
Query: 120 DFRWEASNERAEIGRNTLVKA----LKDDVVDILYLDNTYCNSSYAFPSR 165
DFR ++ + + + +V + +K +DI YLD TY N Y+FP +
Sbjct: 505 DFRACPAHVKHPLLKPDIVDSISGKIKQQKIDICYLDTTYLNPKYSFPPQ 554
>gi|148675981|gb|EDL07928.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_a [Mus musculus]
Length = 699
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 152/379 (40%), Gaps = 80/379 (21%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVFLYCSPV 64
Query: 46 TAKLFPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P + I ++I + IS+V +SGEK V V + A HCPG
Sbjct: 65 TKELL-LTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPG----- 118
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
G G +LYTGDFR + E R L+ + +KD + +YLD T+C+
Sbjct: 119 -----SGSNGTVLYTGDFRL----AKGEASRMELLHSGGRVKD--IQSVYLDTTFCDPRF 167
Query: 160 YAFPSREVAAQQI------W--------VWPERLQTMHLLGFHDIFTTKTS----LTRVR 201
Y PSRE + I W VW L G+ +FT + V
Sbjct: 168 YQIPSREQCLRGILELVRSWVTRSPHHVVW---LNCKAAYGYEYLFTNLSEELGVQVHVD 224
Query: 202 AVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG-- 259
+ + D L L T T I P + + LP + S ++
Sbjct: 225 KLDMFKNMPDILHHLTTDRNT-QIHACRHPKAEECFQ-WNKLPCGITSQNKTALHTISIK 282
Query: 260 ------GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSS 313
G +T K + R + Y +S HS F+EI++FL+ + P N+ V
Sbjct: 283 PSTMWFGERTRK----TNVIVRTGESSYRACFSFHSSFSEIKDFLSYICPVNVYPNVIPV 338
Query: 314 SCYVDPLY-YFGRLCRANQ 331
VD + LCR+ Q
Sbjct: 339 GLTVDKVMDVLKPLCRSPQ 357
>gi|148675982|gb|EDL07929.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_b [Mus musculus]
Length = 480
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 151/376 (40%), Gaps = 74/376 (19%)
Query: 2 EKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLKARAYFLSHCHKDHMKGL-----RAPSLKRRLECSLKVFLYCSPV 64
Query: 46 TAKLFPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P + I ++I + IS+V +SGEK V V + A HCPG
Sbjct: 65 TKELL-LTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPG----- 118
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS- 159
G G +LYTGDFR + E R L+ + +KD + +YLD T+C+
Sbjct: 119 -----SGSNGTVLYTGDFRL----AKGEASRMELLHSGGRVKD--IQSVYLDTTFCDPRF 167
Query: 160 YAFPSREVAAQQIW----VWPER-------LQTMHLLGFHDIFTTKTS----LTRVRAVP 204
Y PSRE + I W R L G+ +FT + V +
Sbjct: 168 YQIPSREQCLRGILELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDKLD 227
Query: 205 RYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG----- 259
+ D L L T T I P + + LP + S ++
Sbjct: 228 MFKNMPDILHHLTTDRNT-QIHACRHPKAEECFQ-WNKLPCGITSQNKTALHTISIKPST 285
Query: 260 ---GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCY 316
G +T K + R + Y +S HS F+EI++FL+ + P N+ V
Sbjct: 286 MWFGERTRK----TNVIVRTGESSYRACFSFHSSFSEIKDFLSYICPVNVYPNVIPVGLT 341
Query: 317 VDPLY-YFGRLCRANQ 331
VD + LCR+ Q
Sbjct: 342 VDKVMDVLKPLCRSPQ 357
>gi|302687346|ref|XP_003033353.1| hypothetical protein SCHCODRAFT_53758 [Schizophyllum commune H4-8]
gi|300107047|gb|EFI98450.1| hypothetical protein SCHCODRAFT_53758, partial [Schizophyllum
commune H4-8]
Length = 463
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 84/184 (45%), Gaps = 45/184 (24%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD + GS + YFLTH HSDH LSS+W GP++CS +T L +
Sbjct: 53 IAVDAFRYGSIPGVKAYFLTHAHSDHYTNLSSSWDSGPIYCSEVTCNLI--------AHM 104
Query: 62 IRVLDIGSWHSISVVSPSSGEKT-FVEVIAIDANHCPGILGCSVMLLFRGDFGC------ 114
+RV D H + + +P+ T V+V I+ANHCPG S + F G
Sbjct: 105 LRV-DKKWLHPLPLDTPTEIPDTGGVKVTLIEANHCPG----SSLFFFEGRQTVNAGDSA 159
Query: 115 -------------LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYA 161
L+ GDFR AS E + VK K +D +YLD TY + Y
Sbjct: 160 FKSPFVGTGRVFRYLHCGDFR--ASPRHVE---HPCVKGKK---IDHVYLDTTYLDPKYT 211
Query: 162 FPSR 165
FP +
Sbjct: 212 FPPQ 215
>gi|358055743|dbj|GAA98088.1| hypothetical protein E5Q_04770 [Mixia osmundae IAM 14324]
Length = 979
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 78/184 (42%), Gaps = 41/184 (22%)
Query: 1 MEKGLISVDRW----TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
ME I+VD + +G + YFL+H H+DH LS +W GP++ S+ T L G
Sbjct: 426 MEGMPIAVDAFRYGGIKGIKAYFLSHAHADHYTNLSGSWNHGPVYASKTTCNLIVANL-G 484
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-- 114
+ + L + I+ V+ V IDANHCPG S + LF
Sbjct: 485 VKPEYVHPLPFDTPTVIAGVT----------VTLIDANHCPG----SCLFLFEAPHTDPK 530
Query: 115 ------------LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAF 162
L+ GDFR + R AL +DI YLD TY N Y F
Sbjct: 531 SPYSKTPSRIFRYLHCGDFRASPVHIRH--------PALAGKRIDICYLDTTYLNPRYTF 582
Query: 163 PSRE 166
P++E
Sbjct: 583 PAQE 586
>gi|412987940|emb|CCO19336.1| predicted protein [Bathycoccus prasinos]
Length = 697
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 16 QVYFLTHLHSDHTQGLSSAW-----------ARGPLFCSRLTAKLFPLKFPGLDLSLIRV 64
+ Y LTH HSDHT GLSSA+ + ++CS++T L + + I
Sbjct: 30 KAYVLTHFHSDHTVGLSSAFNGDKGGTTNTKKKKLIYCSKITGSLIK-EITKVKEEYIVP 88
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG--CLLYTGDFR 122
++ H+ + + +S TF DANHCPG + M F +L+TGDFR
Sbjct: 89 CEL---HAETEIEGTSYTVTF-----FDANHCPG----AAMAYFFDKVTKRTVLHTGDFR 136
Query: 123 WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
A ++ + + ++ +D LYLD TYCN +Y FP ++VA +
Sbjct: 137 --ADEDKVQKNEKLMETLKRNGRLDELYLDTTYCNPNYDFPRQKVALE 182
>gi|195451117|ref|XP_002072775.1| GK13503 [Drosophila willistoni]
gi|194168860|gb|EDW83761.1| GK13503 [Drosophila willistoni]
Length = 652
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 72/146 (49%), Gaps = 24/146 (16%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFL+H H+DH GL+ ++ P++ S TA+L F LD I +D+ I +
Sbjct: 249 YFLSHYHADHYIGLTRKFSL-PIYMSPTTARLV-RTFIKLDDIYINEIDVDQTIIIDNI- 305
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNT 136
E+ AIDANHCPG L M F+ G +L+TGDFR E I N
Sbjct: 306 ---------EITAIDANHCPGAL----MFFFKLSSGQTILHTGDFRANFEMESLPIFWN- 351
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAF 162
+ +D+LYLD TY N +Y F
Sbjct: 352 ------NPQLDVLYLDTTYLNKNYDF 371
>gi|409041196|gb|EKM50682.1| hypothetical protein PHACADRAFT_166360 [Phanerochaete carnosa
HHB-10118-sp]
Length = 461
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 84/186 (45%), Gaps = 43/186 (23%)
Query: 1 MEKGLISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M+ I+VD + G+ YFLTH HSDH LSS W G ++CS TA L +
Sbjct: 39 MQGMPIAVDAFRYGTIPGVTAYFLTHAHSDHYTNLSSNWKSGAIYCSEGTANLI-VHMLR 97
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-- 114
+D + L + + + V P++G V V I+ANHCPG S + LF G
Sbjct: 98 VDRKWVHALPMDA----TTVVPNTGG---VTVTLIEANHCPG----SCLFLFEGQQTVNA 146
Query: 115 -----------------LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCN 157
L+ GDFR AS + + + A++ +D +YLD TY +
Sbjct: 147 GDSAYKSTFVGSKRIFRYLHCGDFR--ASPQ------HVMHPAVRGKRIDTVYLDTTYLD 198
Query: 158 SSYAFP 163
Y FP
Sbjct: 199 PKYCFP 204
>gi|290993759|ref|XP_002679500.1| predicted protein [Naegleria gruberi]
gi|284093117|gb|EFC46756.1| predicted protein [Naegleria gruberi]
Length = 506
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 135/336 (40%), Gaps = 62/336 (18%)
Query: 16 QVYFLTHLHSDHTQGL-------SSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIG 68
Q YFL+H HSDH +GL +SA + C +T L +P LD I +D+
Sbjct: 14 QYYFLSHCHSDHFKGLDDRFFQNASASDETCIVCHPITRNLLLALYPKLDKDRILAIDLL 73
Query: 69 SWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-------GDFGCLLYTGDF 121
++V SS E + +NHCPG S M LF + +LY GDF
Sbjct: 74 QPTLLTVRGASSKEPKHFMCTLLSSNHCPG----SCMFLFEIAKPGSPNEVESILYCGDF 129
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSS--YAFPSREVAAQQI--WVWPE 177
R S+ ++ LK + +Y+D+T+C+ S P R + +++ + E
Sbjct: 130 RDPPSD---------TIQYLKSKKISKVYIDDTFCDPSNFLNLPKRSDSIKELIKLIEKE 180
Query: 178 RLQ------TMHLLGFHDI-------FTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIG 224
R + + LLG + F TK P+ ID ++SL T
Sbjct: 181 RAKQRAVYIALDLLGTERVLFELVSHFKTKLFCDYENLNPKRRKEIDCMKSLKENIFTRD 240
Query: 225 --------IMPSGLPWVVKPLKGGGSLP-----GSLFSSYQSKWRATGGTQTEKLKEALG 271
+ + + + + LK P ++F Y +K + ++ G
Sbjct: 241 KEKTFIRVVSKTTIKSLAELLKKEDDCPLLICISTMFLKYLNKDTRGMSSSFDR-----G 295
Query: 272 SVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIR 307
S F I+ + YS HS EI +FL V SN++
Sbjct: 296 SSTYFQDGIFKILYSFHSSHKEILKFLEQVFGSNVK 331
>gi|367016809|ref|XP_003682903.1| hypothetical protein TDEL_0G03250 [Torulaspora delbrueckii]
gi|359750566|emb|CCE93692.1| hypothetical protein TDEL_0G03250 [Torulaspora delbrueckii]
Length = 525
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 34/169 (20%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVL--DIGSWH 71
G YFL+H HSDH GL +W G ++ S++T L KF + L+RVL D +W
Sbjct: 144 GINQYFLSHFHSDHYMGLRKSWDHGTIYGSQITVDLMVSKF-NMSRDLVRVLPMDRETWV 202
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGD------FGCLLYTGDFRWEA 125
+ + + VI +DANHCP G +V L D +L+TGDFR
Sbjct: 203 TET-----------ISVILLDANHCP---GATVFLFQEWDSTRQTVIKQILHTGDFR--- 245
Query: 126 SNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR----EVAAQ 170
SN N++ + ++ +YLD TY + FP++ EV AQ
Sbjct: 246 SNPELIAKLNSICTSR----INQVYLDTTYLIPGFHFPTQNSVLEVTAQ 290
>gi|414879397|tpg|DAA56528.1| TPA: hypothetical protein ZEAMMB73_183608 [Zea mays]
Length = 629
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 148/371 (39%), Gaps = 76/371 (20%)
Query: 1 MEKGL-ISVDRW---TEGSQVYFLTHLHSDH-TQGLSSAWARGPLFCSRLTAKLFPLKFP 55
M +GL +VD W + + FLTH H DH + G ++ +RLT L FP
Sbjct: 5 MPRGLPFAVDTWGSSSRSRRHRFLTHAHRDHLVGAGADIDGGGIVYATRLTLHLALRHFP 64
Query: 56 GLDLSLIRVLDIGSWHSISVVSPSSGEKTFVE-------VIAIDANHCPGILGCSVMLLF 108
L GSW + + G V+ V DANHCPG +VM LF
Sbjct: 65 QL----------GSWEFVEM---EVGRTLVVDDPVGAFSVTTYDANHCPG----AVMFLF 107
Query: 109 RGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDV--VDILYLDNTYCNSSYAFPSRE 166
G FG +L+TGD R + + + K +++ +D ++LD T+ PS++
Sbjct: 108 EGQFGTILHTGDCRLTPDCVQ-NLPMKYITKKGNENICRLDFVFLDCTFSKCFLKLPSKD 166
Query: 167 VAAQQ-------IWVW---PERLQTMHLLGFHDI-------FTTKTSLTRVRAVPRYSFS 209
A +Q IW P LLG DI F TK + R
Sbjct: 167 SAIRQRLQVISCIWKHLHAPFVFLACDLLGHEDILVEVSRTFGTKIYVDR---------K 217
Query: 210 IDTLESLNTMHPTIGIMPSGLPWVV-----------KPLKGGGS--LPGSLFSSYQSKWR 256
+D ++L+ P I S + + K L + P LF ++W
Sbjct: 218 LDCFKALSLTAPEIITDDSSSRFQMVGFHQLHDRASKELAEARANLQPEPLFIRPSTQWY 277
Query: 257 ATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCY 316
AT K +L ++ I+ V +S HS E+E+ L L+QP + I ++ C+
Sbjct: 278 ATCARSP---KPSLTEAEQDELGIWHVCFSIHSSRDELEQALQLLQPHWV--ISTTPPCF 332
Query: 317 VDPLYYFGRLC 327
L Y + C
Sbjct: 333 AIELSYVKKHC 343
>gi|449273909|gb|EMC83252.1| Protein artemis, partial [Columba livia]
Length = 636
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 17/133 (12%)
Query: 40 LFCSRLTAKLF--PLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCP 97
L+CS +T +L K+ + ++ L++ + IS+V +SGEK +EV + A HCP
Sbjct: 6 LYCSPVTKELLLTSRKYKFWENHIV-ALEVETPTQISLVDETSGEKEDIEVTLLPAGHCP 64
Query: 98 GILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNT 154
G SVM LF GD G +LYTGDFR + E R L+ + +KD + +YLD T
Sbjct: 65 G----SVMFLFEGDKGTVLYTGDFRL----AKGEAARMELLHSGTGVKD--IQSVYLDTT 114
Query: 155 YCNSS-YAFPSRE 166
+C+ Y PSRE
Sbjct: 115 FCDPKFYHIPSRE 127
>gi|405121618|gb|AFR96386.1| DNA cross-link repair protein pso2/snm1 [Cryptococcus neoformans
var. grubii H99]
Length = 809
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 75/177 (42%), Gaps = 51/177 (28%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDI------ 67
G Y LTH HSDH LS +W+ GP++CS TA L +I +L++
Sbjct: 347 GVTAYLLTHAHSDHYTNLSKSWSNGPIYCSETTANL-----------IIHMLEVDPKWVH 395
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-------GDFGCL----- 115
G + + P++G V V I+ANHCPG S + LF GD G
Sbjct: 396 GLPNDMPFEMPNTG---GVTVTPIEANHCPG----SSIFLFEGRQTVNAGDSGFASPYVG 448
Query: 116 -------LYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
L+ GDFR + L A+ ++ YLD TY N Y FP +
Sbjct: 449 SKRVFRYLHCGDFRANP--------KMVLHPAIARAPINTCYLDTTYLNPKYCFPPQ 497
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 16/118 (13%)
Query: 187 FHDIFTTKTSLTRVRAVPRYSFSIDTLES-LNTMHP----TIGIMPSGLPWVVKPLKGGG 241
H + T+ + +V +P + +D L+S L +HP +G P+G W P G
Sbjct: 649 LHSMLTSDPTEAQVHLLPLGNIQLDRLQSYLTLLHPHFDRVLGFRPTG--WSYSPPAGTD 706
Query: 242 SLP--GSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEF 297
LP ++ Q+K G LK GS F +Y VPYS+HS F E+ F
Sbjct: 707 MLPDVNTVIRRDQAKRFGEG-----DLKTMRGSNRNF--MMYGVPYSEHSSFFELTCF 757
>gi|392578335|gb|EIW71463.1| hypothetical protein TREMEDRAFT_28150, partial [Tremella
mesenterica DSM 1558]
Length = 482
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
++VD + G+ Y LTH HSDH LS +W GP++CS TA L + G++
Sbjct: 47 VAVDAFRYGAIPKVTAYLLTHAHSDHYTNLSRSWNHGPIYCSETTANLI-IHMLGVEPKW 105
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-------GDFGC 114
+ L + I P++G V V ++ANHCPG S + LF GD G
Sbjct: 106 VHGLP----NDIPFEMPNTGG---VTVTPMEANHCPG----SSIFLFEGRQTVNAGDSGF 154
Query: 115 L-LYTGD---FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQ 170
Y G FR+ + + L A+ +D YLD TY N Y FP + + +
Sbjct: 155 TSPYVGSKRVFRYLHCGDFRACPKMVLHPAIAKAKIDTCYLDTTYLNPKYCFPPQPLVIE 214
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 37/180 (20%)
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIF 191
IG+ +VKA+ + +Y D R+ A PE H +
Sbjct: 271 IGKERIVKAVAKALRTTIYCD-----------PRKKAILLCQTDPE---------LHSLL 310
Query: 192 TTKTSLTRVRAVPRYSFSIDTL-ESLNTMHP----TIGIMPSGLPWVVKPLKGGGSLP-- 244
+T + V +P + +D L E L +HP +G P+G W P G LP
Sbjct: 311 STDPVSSMVHLLPLGNIQLDRLQEYLTRLHPHFDRVLGFRPTG--WSYSPPAGTDLLPDV 368
Query: 245 GSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEF-LNLVQP 303
++ QS+ G LK GS ++ +Y VPYS+HS F E+ F L+L P
Sbjct: 369 NTVIRRDQSRGFTDAG-----LKPMRGSCRQY--MMYGVPYSEHSSFFELTCFALSLPGP 421
>gi|302780583|ref|XP_002972066.1| hypothetical protein SELMODRAFT_96540 [Selaginella moellendorffii]
gi|300160365|gb|EFJ26983.1| hypothetical protein SELMODRAFT_96540 [Selaginella moellendorffii]
Length = 204
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSIS 74
S+ YFLTH H DH GL+ +W +G +FCS++T +L ++ L + +
Sbjct: 60 SRAYFLTHFHGDHYAGLAPSWDKGMIFCSQVTGRL-----------VVEALGVRRDFVVE 108
Query: 75 VVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGR 134
+ S +V +DANHCPG + V + G ++TGD R+ + +
Sbjct: 109 LAMNSVIWIDECQVTLVDANHCPGAVQFLVEVPEHGTR--FVHTGDMRFTPVM-KEDASL 165
Query: 135 NTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
V A D ++LD TYCN + FP++E + I ER+
Sbjct: 166 CNFVGA------DAVFLDTTYCNPKFVFPAQEESISYIAETIERM 204
>gi|147788138|emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]
Length = 1066
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 115/266 (43%), Gaps = 33/266 (12%)
Query: 88 VIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVV- 146
V A DANHCPG +VM LF GDFG +L+TGD R + + + K K+
Sbjct: 603 VTAFDANHCPG----AVMFLFEGDFGNILHTGDCRL-IPECLQNLPQKYVTKKGKEPKCQ 657
Query: 147 -DILYLDNTYCNSSYAFPSREVAAQQ----IWVWPER---LQTMHLLGFHDIFTTKTSLT 198
D ++LD T+ SS PS+ +A QQ IW P+ +LG +I + +
Sbjct: 658 FDYVFLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDAPIVYLCSDMLGQEEILINVSRIF 717
Query: 199 RVRAVPRYSFSIDTLESLNTMHPTI-GIMPS-------GLPWVVKPLKG------GGSLP 244
+ + + + ++L M P I PS G P + + + SLP
Sbjct: 718 GSKIFVDKANNPECFQALTHMVPEILSQDPSSRFQVFEGFPKLCERAQAKLAEAQANSLP 777
Query: 245 GSLFSSYQSKWRATGGT--QTE-KLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLV 301
L ++W A +TE + KE+ R I+ V YS HS E+E L L+
Sbjct: 778 EPLIIRPSAQWYACEEDLPKTERRKKESFNEAVRDQFGIWHVCYSIHSSRQELEWALQLL 837
Query: 302 QPSNIRGIVSSSSCYVDPLYYFGRLC 327
P R + ++ SC L Y + C
Sbjct: 838 APK--RVVSTTPSCRAMELNYVKKHC 861
>gi|110759553|ref|XP_001122361.1| PREDICTED: protein artemis-like isoform 1 [Apis mellifera]
gi|328781177|ref|XP_003249933.1| PREDICTED: protein artemis-like isoform 2 [Apis mellifera]
Length = 392
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 138/346 (39%), Gaps = 64/346 (18%)
Query: 6 ISVDRWTEG---SQVYFLTHLHSDHTQGLSSAW------ARGPLFCSRLTAKLFPLKFPG 56
ISVDR+ S ++FL+H HSDH GLS + L+CS +T L +F
Sbjct: 14 ISVDRFDGANLTSSIFFLSHCHSDHMHGLSDMFFEHIDEYNKYLYCSPITKALLENRF-K 72
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
S ++ +DI S I S + +K + V I A HCPG SVM LF + +L
Sbjct: 73 FKTSCVKEIDINSPTVIE-YSIKNEDKILICVTCIPAGHCPG----SVMFLFEKNNISIL 127
Query: 117 YTGDFRWEASN--ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSY-AFPSREVAAQQI- 172
YTGDFR + + + K + I YLD T+ ++ + +FP+R+ + ++
Sbjct: 128 YTGDFRINPKDFPKLKSLHYYNDSKLIPKSFTKI-YLDTTFLSTDFSSFPTRQESVFKMY 186
Query: 173 -----WVWPE--------------------RLQTMHLLGFH---DIFTTKTSLTRVRAVP 204
W+ + L M + H D+F T R+ +
Sbjct: 187 EVIKNWISKDPRNVVILECSAMYGSEFLFVELSKMLNMKIHVRSDVFET---YCRIAQLS 243
Query: 205 RYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTE 264
Y + S++ I + V + +P + KWR T
Sbjct: 244 CYVTNDPYSTSIHACKKKISVSGLHCRSDVSNMNIMTVIPSVM------KWRKKDTT--- 294
Query: 265 KLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
+G D+ + ++V YS HS F E++ F+ + I V
Sbjct: 295 ----IIGEWDKVKERTFNVCYSTHSSFNELKAFIQYFEALEIYPCV 336
>gi|410076722|ref|XP_003955943.1| hypothetical protein KAFR_0B05120 [Kazachstania africana CBS 2517]
gi|372462526|emb|CCF56808.1| hypothetical protein KAFR_0B05120 [Kazachstania africana CBS 2517]
Length = 663
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 28/163 (17%)
Query: 14 GSQV--YFLTHLHSDHTQGLSSAWARG-PLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
SQ+ YFL+H HSDH GL +W + ++CS +T+KL KF +S R++ I +
Sbjct: 279 NSQINDYFLSHFHSDHYIGLKKSWDKADKIYCSPITSKLLQFKFK---ISADRIVSIPNR 335
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR--------GDFGCLLYTGDFR 122
+ S + V DANHCPG + + LF+ +L+TGDFR
Sbjct: 336 EKHWITSN-------ISVTPFDANHCPG----AQVFLFQEWATKDSLKPMKQILHTGDFR 384
Query: 123 WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
SN + +K ++ +D +YLD TY + + FPS+
Sbjct: 385 ---SNSHLINEIHDFLKVSRNLTIDEVYLDTTYLSQNNNFPSQ 424
>gi|149030437|gb|EDL85474.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_c [Rattus norvegicus]
gi|149030438|gb|EDL85475.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_c [Rattus norvegicus]
Length = 415
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 75/206 (36%), Gaps = 77/206 (37%)
Query: 146 VDILYLDNTYCNSSYAFPSREVAAQQI--------------------------------- 172
+ LYLDNT CN + PSR+ A QQI
Sbjct: 13 IHTLYLDNTNCNPALVLPSRQEATQQIIQLIRQFPQHNIKIGLYSLGKESLLEQLALEFQ 72
Query: 173 -WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSG 229
WV P+RL+ + LLG D+FT + R+ AV + N HPTI I P+
Sbjct: 73 TWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDHMEICHSAMLQWNQTHPTIAIFPT- 131
Query: 230 LPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHS 289
+ K++ H IYS+PYSDHS
Sbjct: 132 ---------------------------------SRKIRSP-------HPSIYSIPYSDHS 151
Query: 290 CFTEIEEFLNLVQPSNIRGIVSSSSC 315
++E+ F+ ++P + IV C
Sbjct: 152 SYSELRAFVAALRPCQVVPIVREQPC 177
>gi|47218348|emb|CAG04180.1| unnamed protein product [Tetraodon nigroviridis]
Length = 513
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 6 ISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRLTAKL 49
IS+DR+ ++ YFL+H H DH +GL +GP L+CS +T +L
Sbjct: 14 ISLDRFDRENLHARAYFLSHCHKDHMKGL-----KGPVLKRKLQLSRTVRLYCSYVTREL 68
Query: 50 FPLKFPGLDL--SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLL 107
L P S L++ S IS+V ++GEK + V + A HCPG + L
Sbjct: 69 L-LSSPKYAFWESYTVPLELDSPTQISLVDETTGEKEDLVVTLLSAGHCPGSVMQVTAFL 127
Query: 108 FRGDFGCLLYTGDFRWEASNERAEIGR-NTLVKALKDDVVDILYLDNTYCNSS-YAFPSR 165
F G G +LYTGDFR+ +I R + L + + +YLD+T+ + + P+R
Sbjct: 128 FEGSQGTVLYTGDFRFST----GDISRMDHLHSGSRVKDIQSIYLDSTFYDPKFFRIPTR 183
Query: 166 EVAAQQI 172
+ + I
Sbjct: 184 DACLKGI 190
>gi|58380350|ref|XP_310480.2| AGAP000597-PA [Anopheles gambiae str. PEST]
gi|55243186|gb|EAA06670.2| AGAP000597-PA [Anopheles gambiae str. PEST]
Length = 406
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 22/173 (12%)
Query: 6 ISVDRWTEG----SQVYFLTHLHSDHTQGLSSAWA-RGPLFCSRLTAKLFPLKFPGLDLS 60
I +DR+ + + ++FL+H H DH QGL A GPL+ S TA + L+ P L
Sbjct: 14 IGIDRFDQPVRDRATLFFLSHCHVDHMQGLPDAAPLPGPLYVSPHTAVIVGLRHPQHTLV 73
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
+ V + + V P +G + V + A HCPG SVM F LLYTGD
Sbjct: 74 PVPVREQLNL----TVRPPAGPAYELCVRTVPAEHCPG----SVMFYFETKTVRLLYTGD 125
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYA-FPSREVAAQQI 172
FR +++ A I R + I+YLD+T+ + YA FP R+ + +I
Sbjct: 126 FRLSSASLTA-IARYRVRPT-------IVYLDSTFLDRRYAYFPPRQASMDRI 170
>gi|58269998|ref|XP_572155.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57228391|gb|AAW44848.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 811
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 51/179 (28%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDI------ 67
G Y LTH HSDH LS +W GP++CS+ TA L +I +L++
Sbjct: 344 GVTAYLLTHAHSDHYTNLSKSWNNGPIYCSQTTANL-----------IIHMLEVDPKWVH 392
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-------GDFGC------ 114
G + + P++G V V I+ANHCPG S + LF GD G
Sbjct: 393 GLPNDMPFEMPNTGG---VTVTPIEANHCPG----SSIFLFEGRQTVNAGDSGFASPYVG 445
Query: 115 ------LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
L+ GDFR + L A+ ++ YLD TY N Y FP + +
Sbjct: 446 SKRVFRYLHCGDFRANP--------KMVLHPAIARAPINTCYLDTTYLNPKYCFPPQPL 496
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 16/118 (13%)
Query: 187 FHDIFTTKTSLTRVRAVPRYSFSIDTLES-LNTMHP----TIGIMPSGLPWVVKPLKGGG 241
H + T+ +V +P + +D L+S L +HP +G P+G W P G
Sbjct: 646 LHSMLTSDPIEAQVHLLPLGNIQLDRLQSYLTLLHPHFDRVLGFRPTG--WSYSPPAGTD 703
Query: 242 SLP--GSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEF 297
LP ++ Q++ G LK GS F +Y VPYS+HS F E+ F
Sbjct: 704 MLPDVNTIIRRDQARRFGEG-----DLKTMRGSSRNF--MMYGVPYSEHSSFFELTCF 754
>gi|254577503|ref|XP_002494738.1| ZYRO0A08514p [Zygosaccharomyces rouxii]
gi|238937627|emb|CAR25805.1| ZYRO0A08514p [Zygosaccharomyces rouxii]
Length = 490
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 75/156 (48%), Gaps = 31/156 (19%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFL+H HSDH GL +W G ++ S +T L KF +D S +R L + I +
Sbjct: 117 YFLSHFHSDHYGGLKKSWTNGIIYASSITINLVRDKF-KIDGSRLRPLPMNE--KIWITD 173
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-----GDFGCLLYTGDFRWEASNERAEI 132
V V+ +DANHCPG +V+ LF +L+TGDFR
Sbjct: 174 K-------VSVVLLDANHCPG----AVVFLFEEYDNDAVVKTVLHTGDFR---------- 212
Query: 133 GRNTLVKALK--DDVVDILYLDNTYCNSSYAFPSRE 166
N L++ +K +D +YLD TY + FPS+E
Sbjct: 213 ANNKLIEEVKRWTTRLDEVYLDTTYLIPGFHFPSQE 248
>gi|134113669|ref|XP_774419.1| hypothetical protein CNBG0650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257057|gb|EAL19772.1| hypothetical protein CNBG0650 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 811
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 51/179 (28%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDI------ 67
G Y LTH HSDH LS +W GP++CS+ TA L +I +L++
Sbjct: 344 GVTAYLLTHAHSDHYTNLSKSWNNGPIYCSQTTANL-----------IIHMLEVDPKWVH 392
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-------GDFGC------ 114
G + + P++G V V I+ANHCPG S + LF GD G
Sbjct: 393 GLPNDMPFEMPNTGG---VTVTPIEANHCPG----SSIFLFEGRQTVNAGDSGFASPYVG 445
Query: 115 ------LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
L+ GDFR + L A+ ++ YLD TY N Y FP + +
Sbjct: 446 SKRVFRYLHCGDFRANP--------KMVLHPAIARAPINTCYLDTTYLNPKYCFPPQPL 496
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 16/118 (13%)
Query: 187 FHDIFTTKTSLTRVRAVPRYSFSIDTLES-LNTMHP----TIGIMPSGLPWVVKPLKGGG 241
H + T+ +V +P + +D L+S L +HP +G P+G W P G
Sbjct: 646 LHSMLTSDPIEAQVHLLPLGNIQLDRLQSYLTLLHPHFDRVLGFRPTG--WSYSPPAGTD 703
Query: 242 SLP--GSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEF 297
LP ++ Q++ G LK GS F +Y VPYS+HS F E+ F
Sbjct: 704 MLPDVNTIIRRDQARRFGEG-----DLKTMRGSSRNF--MMYGVPYSEHSSFFELTCF 754
>gi|403420266|emb|CCM06966.1| predicted protein [Fibroporia radiculosa]
Length = 810
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 43/180 (23%)
Query: 1 MEKGLISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M+ I+VD + G+ YFLTH HSDH LS+ W GP++CS TA L + G
Sbjct: 391 MQGMPIAVDAFRYGTIPGISAYFLTHAHSDHYTNLSANWRSGPIYCSEGTANLI-IHMLG 449
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-- 114
+D + L + ++ + P +G V+V I+ANHCPG S + LF G
Sbjct: 450 VDPQWVHALPM----DVATIIPQTGG---VQVTLIEANHCPG----SCLFLFEGPQTVNA 498
Query: 115 -----------------LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCN 157
L+ GDFR R+ ++K ++D +YLD TY +
Sbjct: 499 GDSAFKSSFVGSSKTFRYLHCGDFRASP--------RHVNHPSVKGKLLDHVYLDTTYLD 550
>gi|148675642|gb|EDL07589.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_d [Mus musculus]
Length = 415
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 74/206 (35%), Gaps = 77/206 (37%)
Query: 146 VDILYLDNTYCNSSYAFPSREVAAQQI--------------------------------- 172
+ LYLDNT CN + PSR+ A QQI
Sbjct: 13 IHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQHNIKIGLYSLGKESLLEQLALEFR 72
Query: 173 -WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSG 229
WV P+RL+ + LLG D+FT + R+ AV + N HPTI I P+
Sbjct: 73 TWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDHTEICHSAMLQWNQSHPTIAIFPTS 132
Query: 230 LPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHS 289
K R+ H IY+VPYSDHS
Sbjct: 133 -----------------------RKVRSP------------------HPSIYTVPYSDHS 151
Query: 290 CFTEIEEFLNLVQPSNIRGIVSSSSC 315
++E+ F+ ++P + IV C
Sbjct: 152 SYSELRAFVAALRPCQVVPIVHQKPC 177
>gi|70778907|ref|NP_001020483.1| 5' exonuclease Apollo isoform b [Mus musculus]
gi|44890376|gb|AAH67017.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) [Mus
musculus]
Length = 415
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 74/206 (35%), Gaps = 77/206 (37%)
Query: 146 VDILYLDNTYCNSSYAFPSREVAAQQI--------------------------------- 172
+ LYLDNT CN + PSR+ A QQI
Sbjct: 13 IHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQHNIKIGLYSLGKESLLEQLALEFR 72
Query: 173 -WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSG 229
WV P+RL+ + LLG D+FT + R+ AV + N HPTI I P+
Sbjct: 73 TWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDHTEICHSAMLQWNQSHPTIAIFPTS 132
Query: 230 LPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHS 289
K R+ H IY+VPYSDHS
Sbjct: 133 -----------------------RKVRSP------------------HPSIYTVPYSDHS 151
Query: 290 CFTEIEEFLNLVQPSNIRGIVSSSSC 315
++E+ F+ ++P + IV C
Sbjct: 152 SYSELRAFVAALRPCQVVPIVHQKPC 177
>gi|25151114|ref|NP_740895.1| Protein MRT-1 [Caenorhabditis elegans]
gi|20338940|emb|CAD30439.1| Protein MRT-1 [Caenorhabditis elegans]
Length = 608
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 131/314 (41%), Gaps = 50/314 (15%)
Query: 6 ISVDRWTE--GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS--- 60
ISVD + + GS+ FLTH HSDH +GL W R ++CS TAKL P S
Sbjct: 223 ISVDYFLKKSGSRYNFLTHAHSDHYRGLDKKWTRS-VYCSPETAKLLPHIMGYTADSPPP 281
Query: 61 --LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF------ 112
LI L+ H +V ++ANHCPG +VM +F G
Sbjct: 282 AGLINPLEENVPHKFDS----------FQVTLVNANHCPG----AVMFVFEGSKIEEIAG 327
Query: 113 GCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR----EVA 168
G +L TGDFR + + N L + + I+YLDNTY + FP R ++
Sbjct: 328 GAVLCTGDFRADKMFLESLKPGNQL-HWMTEIKFGIIYLDNTYFSLDMPFPERCEAEKIL 386
Query: 169 AQQIWVWPER--LQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSI-DTLESLNTMHPTIGI 225
+ I P + +H LG ++ +++R+ P + + L G+
Sbjct: 387 LKAIEAHPHENIVIPLHRLGREELI---QAISRILNEPIMVYDERKVISDLLDFSSNCGV 443
Query: 226 MPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPY 285
+ +K +K G SY + + L G+ + I +PY
Sbjct: 444 LKQYRD--IKVIKKG---------SYCEISQNSVIIDISMLYYTFGNGVNDDEGIIRIPY 492
Query: 286 SDHSCFTEIEEFLN 299
SDHS +EI +FL+
Sbjct: 493 SDHSSRSEILKFLS 506
>gi|145352117|ref|XP_001420404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580638|gb|ABO98697.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 346
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 138/323 (42%), Gaps = 59/323 (18%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH H+DH +GL+ + RG ++ +R T +L K G+ +RV++ VV
Sbjct: 29 WFLTHFHADHHRGLTRTFDRGVVYGTRTTTELVRTKI-GVPRERLRVVE-----FGVVVR 82
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRN-- 135
+ TF+ ANHCPG R D +L+TGDFR+ RN
Sbjct: 83 VDGVDVTFLR-----ANHCPGAAMICFEFPHRRDASPVLHTGDFRFHDGM------RNDP 131
Query: 136 TLVKALKDDVV--DILYLDNTYCNSSY-AFPSRE---VAAQQIWVWPERLQT--MHLLGF 187
TL++ D IL LD TYC+ + FP++E A + V + L T + L G
Sbjct: 132 TLLRITSDPSAPRPILILDTTYCSLEHDDFPTQERVLKAVRDAVVHEDLLSTRKLFLFGT 191
Query: 188 HDIFTTKTSLTRVRAVPRYSF------------SIDTLESLNTMH----PTIGIMPSGLP 231
+ I K L + + R + ++D E H + ++P G
Sbjct: 192 YTIGKEKVFLEAAKVLNRKVYIGKAKRSVMDAIALDPEERSAMTHDDSKTNLHVVPMGST 251
Query: 232 WVVKPLKGGGSLPGSLFSSYQSK------WRATGGTQTEKLKEALGSVDRFHKYI--YSV 283
+K S+ Y+S+ +R TG T + + K A + R + Y +
Sbjct: 252 SFMK--------MASILKYYKSRFDTVIAFRPTGWTFSAQKKTARATSRRQRGRLIQYGL 303
Query: 284 PYSDHSCFTEIEEFLNLVQPSNI 306
PYS+HS E+ EF+ + P I
Sbjct: 304 PYSEHSSLNELREFVRFMNPKFI 326
>gi|344304626|gb|EGW34858.1| hypothetical protein SPAPADRAFT_69243 [Spathaspora passalidarum
NRRL Y-27907]
Length = 638
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 46/190 (24%)
Query: 18 YFLTHLHSDHTQGLSSAWA-----------------RGPLFCSRLTAKLFPLKFPGLDLS 60
YFL+H HSDH G+S WA R ++CS +T KL L F +D
Sbjct: 172 YFLSHFHSDHYGGISKKWAYERVFKDDTDFENESKYRRIIYCSVITGKLLTLHF-SIDPK 230
Query: 61 LIRVLDIGSWHSI-SVVSP------SSGEKTF-VEVIAIDANHCPGILGCSVMLLFRGDF 112
I+ L+I + + I S ++ S E+T + V I ANHCPG S + LF
Sbjct: 231 FIKHLEIETRYQIKSYITDIDDGGYESEEQTPGLYVTPISANHCPG----STIFLFES-I 285
Query: 113 GC------LLYTGDFRWEASNERAEIGRNTLVKALKDD----VVDILYLDNTYCNSSYAF 162
G +L+ GDFR EI + L+K D +D +YLD TY + +Y F
Sbjct: 286 GLENKRTRILHCGDFRV-----NYEILSHPLLKQFSIDPNSICLDKVYLDTTYMSPAYNF 340
Query: 163 PSREVAAQQI 172
P +E+ + +
Sbjct: 341 PKQELVCETV 350
>gi|302781672|ref|XP_002972610.1| hypothetical protein SELMODRAFT_97697 [Selaginella moellendorffii]
gi|300160077|gb|EFJ26696.1| hypothetical protein SELMODRAFT_97697 [Selaginella moellendorffii]
Length = 243
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSIS 74
S+ YFLTH H DH GL+ +W +G +FCS++T L ++ L + +
Sbjct: 60 SRAYFLTHFHGDHYAGLAPSWDKGMIFCSQVTGHL-----------VVGALGVRRDFVVE 108
Query: 75 VVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGR 134
+ S +V +DANHCPG + V + G ++TGD R+ + +
Sbjct: 109 LAMNSVIWIDECQVTLVDANHCPGAVQFLVEVPEHGTR--FVHTGDMRFTPVM-KEDASL 165
Query: 135 NTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
V A D ++LD TYCN + FP++E + I ER+
Sbjct: 166 CNFVGA------DAVFLDTTYCNPKFVFPAQEESISYIAETIERM 204
>gi|256075515|ref|XP_002574064.1| DNA cross-link repair protein pso2/snm1 [Schistosoma mansoni]
gi|360043082|emb|CCD78494.1| putative dna cross-link repair protein pso2/snm1 [Schistosoma
mansoni]
Length = 431
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 83/173 (47%), Gaps = 33/173 (19%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKF-PGLDLS 60
I+VD + G YFL+H H DH +G+ + +G ++CS +T L + GL
Sbjct: 69 ITVDAFCYAEIPGCTCYFLSHFHFDHFRGIHKNF-KGDIYCSEVTKNLLRDAYGSGL--- 124
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR--GDFGCLLYT 118
+I VL+I I V EV A+DANHCPG S+M LF L+T
Sbjct: 125 VINVLEIEKSTKIGNV----------EVTALDANHCPG----SLMFLFYVPSKQRTYLHT 170
Query: 119 GDFRWEASNERAE------IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
GDFR+ S I N+ K L + ++LD TYC+S Y FP++
Sbjct: 171 GDFRYTPSMLTHPSILTNYISDNSASKKLPR--IHSIFLDTTYCSSQYDFPNQ 221
>gi|406607864|emb|CCH40802.1| DNA cross-link repair 1A protein [Wickerhamomyces ciferrii]
Length = 571
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 34/170 (20%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFP--LKFPGLDLSLIRVLDIGSWHSISV 75
YFL+H HSDH GLS W++G ++ S+ T+ L +K P I L+ G H ++
Sbjct: 212 YFLSHYHSDHYIGLSKKWSQGIIYTSKTTSNLLQSIMKIPS---ERIIGLEFGIPHDLTE 268
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLF-----RGD-FGCLLYTGDFRWEASNER 129
++V DANHCPG + LF +G+ +L+TGDFR S +
Sbjct: 269 Q---------IKVTLFDANHCPG----GAIFLFEEYNPKGEIIKRILHTGDFR--VSKQH 313
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
++ KD +D +YLD TY N Y F + + +Q + E +
Sbjct: 314 LDL--------FKDMFLDEIYLDTTYMNPVYTFMLQSLVIKQTCEFLESI 355
>gi|226479044|emb|CAX73017.1| DNA cross-link repair 1A protein [Schistosoma japonicum]
Length = 345
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 38/175 (21%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD + G YFL+H HSDH +G+ + +G ++CS +T L + GL L +
Sbjct: 69 ITVDAFCYNDIPGCTYYFLSHFHSDHFKGIHKNF-KGHIYCSEVTKNLLRDAY-GLGL-V 125
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR--GDFGCLLYTG 119
I VL++ I G+ VEV A+DANHCPG S+M +F L+TG
Sbjct: 126 ISVLELEKRTLI-------GD---VEVTALDANHCPG----SLMFIFHVLSSRKTYLHTG 171
Query: 120 DFRW---------EASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
DFR+ +N +E L + + ++LD TYC+S Y FP++
Sbjct: 172 DFRYTPEMLAHPSSLTNYLSENSAKHLSR------IHSVFLDTTYCSSQYDFPTQ 220
>gi|290998549|ref|XP_002681843.1| predicted protein [Naegleria gruberi]
gi|284095468|gb|EFC49099.1| predicted protein [Naegleria gruberi]
Length = 330
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 22/165 (13%)
Query: 10 RWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS 69
++ + +FLTH HSDH GL W+ G ++C+ T L +F D + L+
Sbjct: 22 KYKQKYNTFFLTHFHSDHYAGLVKTWSHGSIYCTIPTCNLVKKQFGIAD----KYLNACE 77
Query: 70 WHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR--GDFGCLLYTGDFRWEASN 127
++ + E V+ +DANHCPG S ++LF+ L+TGD R+
Sbjct: 78 FN-------KTYEYKGVKFTFLDANHCPG----SSLVLFQVSKTGKAFLHTGDMRF---- 122
Query: 128 ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+R++I +L K + ++ +++D TYC+ Y FP + A I
Sbjct: 123 DRSKIDGISL-KGVPKKQLESIFIDTTYCDPFYTFPKQVEAIDFI 166
>gi|412993060|emb|CCO16593.1| predicted protein [Bathycoccus prasinos]
Length = 1523
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 148/393 (37%), Gaps = 104/393 (26%)
Query: 18 YFLTHLHSDHTQGLSSAW----ARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
YFLTH+H DH +GL G ++C+ +T L +FP L+ S ++VL+ S +
Sbjct: 67 YFLTHMHQDHLRGLREDTFENDNNGRIYCTEITNILLVKRFPRLE-SKVKVLEFDSVEVV 125
Query: 74 SVVSPSSG---EKTFVEVIAIDANHCPG-----ILGCSVMLLFRGDF------GCL---- 115
VVS E V +DA HCPG G +L GDF G L
Sbjct: 126 EVVSNKKNTKEEDLRFNVYCLDAGHCPGSAMFVFEGTFGKVLHTGDFRREDWSGSLPSGK 185
Query: 116 -----------------------------------------LYTG--DFRWEASNERAEI 132
L TG D ++ +N
Sbjct: 186 RMSLPTPGSNGSGSNNGLRKNFFSMLNDVPLSAMWSSSSPSLTTGSQDLGYDNNNNTTLK 245
Query: 133 GRNTLVKAL---KDDVVDILYLDNTYCNSSYAFPSREVAAQQI-----WVWPERLQTMHL 184
L K L K VD+LYLDNTY N Y P R VA ++I + PER + L
Sbjct: 246 NATPLPKVLDNSKTQAVDVLYLDNTYNNPEYDHPPRAVALERIVKLVTEIEPERPVILLL 305
Query: 185 --LGFHDIFTTKTSLTRVRAV---PRYS------FSIDTL-ESLNTMHPT-IGIMPSGL- 230
LG DI + T+ + RY+ F + + SL T + ++P +
Sbjct: 306 DSLGKEDIVIALSQATKSKVYLHKDRYNDWLKLGFEKEYVCNSLGENESTRVRVLPKAMG 365
Query: 231 ---PWVVKPLKGGGSLP---GSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIY--- 281
V PL G G L S R T + E K+ + +R K
Sbjct: 366 RHKENVCGPLVAGLKNFKEWGPLVISPTGWARVTEQMREEDEKQEM-DTERREKMTNEEK 424
Query: 282 ------SVPYSDHSCFTEIEEFLNLVQPSNIRG 308
SVPYS HS ++E+E F+ +QP I G
Sbjct: 425 TDWVRRSVPYSLHSSYSELETFVKRIQPRKIIG 457
>gi|149244510|ref|XP_001526798.1| hypothetical protein LELG_01626 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449192|gb|EDK43448.1| hypothetical protein LELG_01626 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 639
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 57/211 (27%)
Query: 18 YFLTHLHSDHTQGLSSAWA-------------------RGPLFCSRLTAKLFPLKFPGLD 58
YFLTH H+DH G+S WA + ++C+ +T KL L F +D
Sbjct: 98 YFLTHFHADHYGGISKKWAYERVFDQNSECDYDDDSKYKKIIYCTVITGKLLTLYF-SVD 156
Query: 59 LSLIRVLDIGSWHSI----------SVVSPSSGEKTFVE---------VIAIDANHCPGI 99
I++L++ + + + +V + +E VI I ANHCPG
Sbjct: 157 PRFIKMLEMDTRYKVQHYAKDDDGLEIVCQDVEDGGIIELEGTSPGLYVIPITANHCPG- 215
Query: 100 LGCSVMLLFR-----GDFGCLLYTGDFRWEASN------ERAEIGRNTLVKALKDDVVDI 148
+ + LF G +L+ GDFR + R +GR+ + + D +D
Sbjct: 216 ---AGIFLFESIGVDGHIHRILHCGDFRVNMTILDHPLLNRFSVGRHNIEET---DKIDQ 269
Query: 149 LYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
+YLD TY + +Y FP +E+ + E L
Sbjct: 270 VYLDTTYMSPTYVFPKQELVCDTLAELFENL 300
>gi|385862192|ref|NP_001245374.1| DNA cross-link repair 1C [Sus scrofa]
Length = 762
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 25/160 (15%)
Query: 21 THLHSDHTQGLSSAWARG--------PLFCSRLTAKLFPLKFPGLDLSLIRV--LDIGSW 70
H +DH +GL ++ + L+CS +T +L L P R+ +++ +
Sbjct: 82 NHEVADHMKGLRASTLKRRLECSLKVSLYCSPVTRELL-LTNPRYRFWEKRIVSIEVETP 140
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERA 130
IS++ + GEK + V + A HCPG SVM LF+G+ G +LYTGDFR +
Sbjct: 141 TQISLIDEAPGEKEEIVVTLLPAGHCPG----SVMFLFQGNNGTVLYTGDFRL----AKG 192
Query: 131 EIGRNTLVK---ALKDDVVDILYLDNTYCNSS-YAFPSRE 166
E R L+ ++KD + +YLD T+C+ Y PSRE
Sbjct: 193 EAARMELLHSGGSVKD--IQSVYLDTTFCHPKYYQIPSRE 230
>gi|91090768|ref|XP_969213.1| PREDICTED: similar to artemis protein [Tribolium castaneum]
gi|270013270|gb|EFA09718.1| hypothetical protein TcasGA2_TC011851 [Tribolium castaneum]
Length = 383
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 6 ISVDRWTEG---SQVYFLTHLHSDHTQGLSS-------AWARGPLFCSRLTAKLFPLKFP 55
ISVDR+ S+ +FL+H H+DH +GL + A R L+ S ++A++ FP
Sbjct: 14 ISVDRFDGANLDSEAFFLSHCHTDHMKGLEAPEFHEKLAQNRRFLYLSHVSAEIVRRMFP 73
Query: 56 GLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL 115
+ +LI LD+ S S+ + S + + V I A HCPG S+M LF +
Sbjct: 74 KIGDNLIE-LDMRSPTSVFLQSGA------ISVTPIPAGHCPG----SIMFLFEAQVN-V 121
Query: 116 LYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYA-FPSREVAAQQI 172
LYTGD+R + + A K ++ +YLD T+ SYA FP R + ++I
Sbjct: 122 LYTGDYRINPRDIPKFTAFYDSLNAKKR--IEAVYLDTTFFLKSYAKFPPRAESLEEI 177
>gi|123477722|ref|XP_001322027.1| DNA repair metallo-beta-lactamase family protein [Trichomonas
vaginalis G3]
gi|121904865|gb|EAY09804.1| DNA repair metallo-beta-lactamase family protein [Trichomonas
vaginalis G3]
Length = 381
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 124/335 (37%), Gaps = 100/335 (29%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSP 78
FL+H H+DH G S + + C+ +TAK+ LK+P L+ I +IGS I
Sbjct: 45 FLSHAHTDHLAGAGSFRSPRVMHCTPITAKMVLLKYPKLN-GCIETHEIGSTIEI----- 98
Query: 79 SSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTL 137
G K + + ANH PG S M F G +L+TGDFR E E E+ RN
Sbjct: 99 -DGTK----ITFLAANHTPG----SAMFFFELPNGKKILHTGDFRAEP--EVVEVARNY- 146
Query: 138 VKALKDDVVDILYLDNTYCNSSYAFPSRE------------------------------- 166
VD LY+D TY S F SR+
Sbjct: 147 ------GPVDRLYMDCTYACSKLQFVSRKDCVSFIIEKVKEAMNNNSLVVIGTYTIGKEE 200
Query: 167 -------VAAQQIWVWPERLQTMHLL---GFH--DIFTTKTSLTRVRAVPRYSF---SID 211
Q+I+ R +T+ L GF ++F+ LTR+ +P +
Sbjct: 201 LVIEAANATCQKIYAPKARFETLQGLINSGFAKPELFSEDPYLTRIHLLPIQECGKEKVS 260
Query: 212 TLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALG 271
+ I PSG W +P WR ++K
Sbjct: 261 LYAASMGFDSVTAIRPSG--WNGRPF-----------------WRCPTFDIYNEIKVTS- 300
Query: 272 SVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
Y VPYSDHS E+ EF+ V+P+ +
Sbjct: 301 ---------YDVPYSDHSSPMELTEFVKAVKPAKV 326
>gi|307191536|gb|EFN75039.1| Artemis protein [Camponotus floridanus]
Length = 318
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 36/193 (18%)
Query: 6 ISVDRW---TEGSQVYFLTHLHSDHTQGLSSAWAR------GPLFCSRLTAKLFPLKFPG 56
ISVDR+ S YFL+H H+DH QG++ + + L+CSR+ +KLF
Sbjct: 14 ISVDRFDGENLNSSAYFLSHCHTDHMQGINYQFFKHLQQYNKYLYCSRI-SKLFLKAKDY 72
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
S ++ L + I +K + V I A HCPG SVM LF D +L
Sbjct: 73 YIESCVKDLSLNIKVCIE-YKNKDNDKNILFVTCISAGHCPG----SVMFLFETD-KLVL 126
Query: 117 YTGDFRWEA----------SNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSY-AFPSR 165
YTGDFR S E + L K +YLD T+ +S++ +FP+R
Sbjct: 127 YTGDFRINPEDYKKIASLHSYENYNVHPKKLAK---------MYLDTTFLDSNFRSFPTR 177
Query: 166 EVAAQQIWVWPER 178
+ + ++I + E+
Sbjct: 178 KESIKKICIEIEK 190
>gi|119576987|gb|EAW56583.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae), isoform
CRA_b [Homo sapiens]
Length = 297
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 72/206 (34%), Gaps = 77/206 (37%)
Query: 146 VDILYLDNTYCNSSYAFPSREVAAQQI--------------------------------- 172
+ LYLDNT CN + PSR+ AA QI
Sbjct: 13 IHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHNIKIGLYSLGKESLLEQLALEFQ 72
Query: 173 -WVW--PERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSG 229
WV P RL+ + LLG D+FT + R+ AV + N HPTI I+P+
Sbjct: 73 TWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDHMEICHSNMLRWNQTHPTIAILPTS 132
Query: 230 LPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHS 289
+ H I+ +PYSDHS
Sbjct: 133 -----------------------------------------RKIHSSHPDIHVIPYSDHS 151
Query: 290 CFTEIEEFLNLVQPSNIRGIVSSSSC 315
++E+ F+ ++P + IVS C
Sbjct: 152 SYSELRAFVAALKPCQVVPIVSRRPC 177
>gi|332216914|ref|XP_003257596.1| PREDICTED: protein artemis [Nomascus leucogenys]
Length = 672
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 83/180 (46%), Gaps = 44/180 (24%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTAKLF 50
E IS+DR+ ++ YFL+H H DH +GL + + L +CS +T +L
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL 69
Query: 51 PLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG 110
L P R+ K + V + A HCPG SVM LF+G
Sbjct: 70 -LTSPKYRFWKKRI------------------KEEIVVTLLPAGHCPG----SVMFLFQG 106
Query: 111 DFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YAFPSRE 166
+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y PSRE
Sbjct: 107 NNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQIPSRE 160
>gi|398012340|ref|XP_003859364.1| hypothetical protein, conserved [Leishmania donovani]
gi|322497578|emb|CBZ32652.1| hypothetical protein, conserved [Leishmania donovani]
Length = 772
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 32/180 (17%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G +++FLTH H+DH +GLSS W G + S LT +L KF GL RVL + W
Sbjct: 26 GPELFFLTHFHTDHMKGLSSTWTAGFIITSTLTRQLLLNKFEGLR---GRVLGLPFWCRT 82
Query: 74 SVVSPSSGEKT-----------FVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDF 121
SV+S ++ + V V + A H PG S M+ G L+TGDF
Sbjct: 83 SVLSAAAAAHSETDSSTTTAVPVVYVTLLPAFHVPG----SAMIYIETPSGVTYLHTGDF 138
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQT 181
++ + + + L + VD LYLD+T+ + +A ++ WP R ++
Sbjct: 139 KYTETAAQM----SPLRTFFQSHRVDHLYLDDTWLHLGHA---------ELKSWPARTES 185
>gi|294655598|ref|XP_457765.2| DEHA2C01936p [Debaryomyces hansenii CBS767]
gi|199430455|emb|CAG85801.2| DEHA2C01936p [Debaryomyces hansenii CBS767]
Length = 712
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 82/197 (41%), Gaps = 56/197 (28%)
Query: 18 YFLTHLHSDHTQGLSSAWA-----------------RGPLFCSRLTAKLFPLKFPGLDLS 60
YFLTH HSDH G++ W + +FCS +TAKL L+F +D
Sbjct: 220 YFLTHFHSDHYGGITKKWCYERVFKDGDDFEDESKYKKIIFCSTITAKLLSLRF-RIDPK 278
Query: 61 LIRVLDIGSWHSI-SVVSPSSGEKTFVE----------VIAIDANHCPGILGCSVMLLFR 109
I L+ + I S + E F++ V I ANHCPG SV+ LF
Sbjct: 279 FIMPLETNRRYLIQSFDTDVETEDGFIQTDDLMLPGLFVTPITANHCPG----SVIFLFE 334
Query: 110 -----GDFGCLLYTGDFRWEASNERAEIGRNTL---------VKALKDDVVDILYLDNTY 155
G +L+ GDFR + R L + D +D +YLD TY
Sbjct: 335 SLSNNGQRLRVLHCGDFR---------VNREILDHPRLLTFNIANQGDLCLDKVYLDTTY 385
Query: 156 CNSSYAFPSREVAAQQI 172
+ SY FP +E+ +
Sbjct: 386 MSPSYNFPKQELVCNTV 402
>gi|407043694|gb|EKE42094.1| DNA repair metallo-beta-lactamase [Entamoeba nuttalli P19]
Length = 396
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G + + L+H HSDH QGLSS W G + + +T L KF + L +
Sbjct: 40 KGYKYFLLSHFHSDHYQGLSSKWKCGIIIGTEITLNLVKYKFKIKNEYL---------YV 90
Query: 73 ISVVSPSSGEKTFVE---VIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNER 129
I + +P+ E + + V AI+A H PG C ++ D L+ GDFR++++ +
Sbjct: 91 IPLNTPTYFEGSNNDGYIVTAIEAGHAPG--SCCFVIKRISDGIIYLHVGDFRFDSTLQN 148
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ 171
+ + + ++ L+LD TYC+ Y F R++ +
Sbjct: 149 DKNWKEYVFTQH----INTLFLDTTYCDPQYKFKERQIICNE 186
>gi|302770741|ref|XP_002968789.1| hypothetical protein SELMODRAFT_409901 [Selaginella moellendorffii]
gi|300163294|gb|EFJ29905.1| hypothetical protein SELMODRAFT_409901 [Selaginella moellendorffii]
Length = 186
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 90 AIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDIL 149
+ A+ C G L CS FGC+L+TGDFRW E + L +A+ VD L
Sbjct: 29 GLSADWCRGPLYCS-------QFGCVLHTGDFRWNNDRCTLEERKEALREAIGGAQVDFL 81
Query: 150 YLDNTYCNSSYAFPSREVAAQQI 172
YLDNT+CN ++FPSR AA ++
Sbjct: 82 YLDNTFCNPLFSFPSRNAAATRV 104
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKF 54
VD W S YFLTHLH+DHT+GLS+ W RGPL+CS+ L F
Sbjct: 7 VDEWRSPSDAYFLTHLHADHTEGLSADWCRGPLYCSQFGCVLHTGDF 53
>gi|146081028|ref|XP_001464168.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134068258|emb|CAM66545.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 772
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 32/180 (17%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G +++FLTH H+DH +GLSS W G + S LT +L KF GL RVL + W
Sbjct: 26 GPELFFLTHFHTDHMKGLSSTWTAGFIITSTLTRQLLLNKFEGLR---GRVLGLPFWCRT 82
Query: 74 SVVSPSSGEKT-----------FVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDF 121
SV+S ++ + V V + A H PG S M+ G L+TGDF
Sbjct: 83 SVLSAAAAAHSETDSSTTTAVPVVYVTLLPAFHVPG----SAMIYIETPSGVTYLHTGDF 138
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQT 181
++ + + + L + VD LYLD+T+ + +A ++ WP R ++
Sbjct: 139 KYTETAAQM----SPLRTFFQSHRVDHLYLDDTWLHLGHA---------ELKSWPARTES 185
>gi|393905092|gb|EFO18773.2| hypothetical protein LOAG_09723 [Loa loa]
Length = 620
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 137/350 (39%), Gaps = 110/350 (31%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPL------KFPGLDLSLIRVLDIGSWHS 72
FL+ + H L+S W ++CS +TAKL + ++ L+ IR LD+ WH
Sbjct: 31 FLSGANPYHCHKLTSKWQNNGIYCSPITAKLLSVISSRRKRYRILN-KWIRPLDLNVWHK 89
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGD----FGCLLYTGDFRWEASNE 128
++ V+ IDANH PG SVML+ G+ G +LYTG FR +
Sbjct: 90 MNGF----------RVMLIDANHAPG----SVMLIIEGEHRTTLGRILYTGFFRADTRFY 135
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCN-SSYAFPSREVAAQQ---------------- 171
+ I + AL++ D++ +D+ Y + + +P+R +A++
Sbjct: 136 QNVIA----LSALQEKKFDVICIDSNYVDFTREEYPNRRSSAKEAANLLRILKYNGVDNV 191
Query: 172 -----------------------IWVWPERLQTMHLLGFHDIFTTKTSLTRVRAVPRYSF 208
IW+ PER + +LG D F+ T + +
Sbjct: 192 AIPVPIIGCESFLVNISRELKCKIWLHPERFEIAQILGIDDYFSETKGDTYIWTCSQ--- 248
Query: 209 SIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKE 268
I++ E L+T I I S P+V+ + G
Sbjct: 249 -IESREVLSTTDSHI-IRISMAPYVMPNISLNG--------------------------- 279
Query: 269 ALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVD 318
+R H + YSDH E+ FL+L+ S I I ++SS V+
Sbjct: 280 -----EREH----VIQYSDHCSSGELRSFLSLLTFSRITAISNNSSLLVE 320
>gi|448100689|ref|XP_004199411.1| Piso0_002850 [Millerozyma farinosa CBS 7064]
gi|359380833|emb|CCE83074.1| Piso0_002850 [Millerozyma farinosa CBS 7064]
Length = 685
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 89/212 (41%), Gaps = 59/212 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAW-----------------ARGPLFCSR 44
++VD + E + YFLTH HSDH GL+ +W R L+CS
Sbjct: 185 VAVDAFNYSPHEEIEQYFLTHFHSDHYGGLTKSWFYERVFGDDNDFSNDSKYRKILYCSE 244
Query: 45 LTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSPS----------SGEKTFVEVIAIDAN 94
+TA L ++F +D IR L + + + V S S + V I+AN
Sbjct: 245 ITADLVRIRF-HIDRRFIRPLCLNKRYLVHVYDSSDLPDGGREEGSSNIPGLYVTLINAN 303
Query: 95 HCPGILGCSVMLLFR-----GDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDV---- 145
HCPG S + LF G +L+ GDFR + ++ L L +
Sbjct: 304 HCPG----SAIFLFESISLDGSTKFILHCGDFR---------VNKDILAHPLLNKFSLEY 350
Query: 146 -----VDILYLDNTYCNSSYAFPSREVAAQQI 172
+D +YLD TY SSY FP +E + +
Sbjct: 351 DCPFELDEVYLDTTYFMSSYNFPKQEKVCEAL 382
>gi|116192517|ref|XP_001222071.1| hypothetical protein CHGG_05976 [Chaetomium globosum CBS 148.51]
gi|88181889|gb|EAQ89357.1| hypothetical protein CHGG_05976 [Chaetomium globosum CBS 148.51]
Length = 830
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 16/114 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG Q YFL+H HSDH GL++ W GP++CS++T L + L + V+++ +
Sbjct: 452 EGCQAYFLSHFHSDHYIGLTANWTHGPIYCSKVTGSLVKSQ---LKTAAKYVVELEFEKT 508
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC----LLYTGDFR 122
+ V + V V I ANHCPG S + LF G +L+ GDFR
Sbjct: 509 VPVP-----DTNGVMVTMIPANHCPG----SSLFLFEKTTGGRTQRVLHCGDFR 553
>gi|366992608|ref|XP_003676069.1| hypothetical protein NCAS_0D01250 [Naumovozyma castellii CBS 4309]
gi|342301935|emb|CCC69706.1| hypothetical protein NCAS_0D01250 [Naumovozyma castellii CBS 4309]
Length = 618
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 107/247 (43%), Gaps = 38/247 (15%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFL+H HSDHT GL +W +G +FCS T+ L ++ +I+ L I I+
Sbjct: 230 YFLSHFHSDHTIGLVKSWNQGTIFCSPETSLLLQWRY-DFAPEMIKELHIAQREWITDT- 287
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-------LYTGDFRWEASNERA 130
+ VI+ DA HCPG L + + D + L+TGDFR
Sbjct: 288 --------ISVISYDAFHCPGSL---IFVFEEWDSQSMNTLNKRVLHTGDFR-------- 328
Query: 131 EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLG-FHD 189
L + D +YLD TY +S Y FP ++ + + + + + L F D
Sbjct: 329 -CNNQVLSNVMSLGHYDQVYLDTTYLDSWYRFPRQDSVVETTGQFAKDVMEIGLKKLFGD 387
Query: 190 ----IFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGI-MPSGLPWVV--KPLKGGGS 242
IF+ S + R+ P+ S + + S + IG+ + S LP K G +
Sbjct: 388 DQKSIFSFMKSQNKKRSRPQSSV-LFLIGSYSLGKEKIGLEIQSHLPLGTYNKIFMNGNA 446
Query: 243 LPGSLFS 249
+ G LF+
Sbjct: 447 VRGKLFA 453
>gi|448518002|ref|XP_003867904.1| Pso2 protein [Candida orthopsilosis Co 90-125]
gi|380352243|emb|CCG22467.1| Pso2 protein [Candida orthopsilosis]
Length = 737
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 46/214 (21%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLF-----------------CSRLTAKLFPLKFPGLDLS 60
YFLTH H+DH G+S W +F C+ +T KL L F +D
Sbjct: 259 YFLTHFHADHYGGISKKWTYDRVFKDDTDYDNDEKYKRVIYCTEITGKLLTLYF-SIDPR 317
Query: 61 LIRVLDIGSWHSISVVSP---------SSGEKTFVEVIAIDANHCPGILGCSVMLLFR-- 109
I+ + + + + + P S + + V I ANHCPG + + LF
Sbjct: 318 FIQQMAMDTRYKVRDYGPVDVADGGFISDEDSPGLYVTPITANHCPG----AGIFLFESI 373
Query: 110 ---GDFGCLLYTGDFRWEASN------ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSY 160
G+ +L+ GDFR + +R + +L+ +D +YLD TY N +Y
Sbjct: 374 GLDGNVHRILHCGDFRVNMTILDHPLLKRFSVSSQRFEDSLR---IDKVYLDTTYMNPTY 430
Query: 161 AFPSREVAAQQIWVWPERLQTM-HLLGFHDIFTT 193
FP +E+ I E L + +D+F T
Sbjct: 431 NFPKQELVCDTIAQLFEHLTAQDDNITSNDLFNT 464
>gi|365989754|ref|XP_003671707.1| hypothetical protein NDAI_0H02910 [Naumovozyma dairenensis CBS 421]
gi|343770480|emb|CCD26464.1| hypothetical protein NDAI_0H02910 [Naumovozyma dairenensis CBS 421]
Length = 754
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 88/186 (47%), Gaps = 27/186 (14%)
Query: 16 QVYFLTHLHSDHTQGLSSAW----------ARGP-LFCSRLTAKLFPLKFPGLDLS-LIR 63
+ YFL+H HSDHT GL +W A P ++CS +T+ L + G L+ I
Sbjct: 317 EYYFLSHFHSDHTIGLCKSWFERNNLNNSTATSPKIYCSPITSLLLQHVY-GFKLNEQIA 375
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPG--ILGCSVMLLFRGDFGCLLYTGDF 121
L+I + + + + +EV+A DANHCPG I ++ + +L+TGDF
Sbjct: 376 ELEIN----VPMTIFNDDLEETIEVVAHDANHCPGSLIFIFTIKNVQTQTTRHILHTGDF 431
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQT 181
R +NE + L K K D +YLD TY N Y FP+++ + + +
Sbjct: 432 R--CNNEMI----SKLQKQFKK--FDAVYLDTTYLNPLYEFPNQKSVVNITSQFAKNVTQ 483
Query: 182 MHLLGF 187
M L F
Sbjct: 484 MGLKKF 489
>gi|225563060|gb|EEH11339.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 748
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 4 GLISVDRWTEGSQ-----VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPL--KFP 55
G++ VD + + FL+H+HSDH QGL S R P ++CS T ++ K+P
Sbjct: 6 GIVEVDYFRKNPNRPAPLACFLSHVHSDHLQGLES--LRAPFIYCSAATREILLRLEKYP 63
Query: 56 ---GLDLSLIRVLDIGSWHSISVVSPSSGE---KTFVEVIAIDANHCPGILGCSVMLLFR 109
++ H ++ P+ E + + V DANHCPG +VM L
Sbjct: 64 HRINFSKGILESRKQHYKHLSKLLVPTEIELSPRNNIRVTLFDANHCPG----AVMFLIE 119
Query: 110 GDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSSYAFPSREVA 168
G+ +LYTGD R E+ I L+ L ++D +YLD T+ S A+ +
Sbjct: 120 GNGKAILYTGDIRAESWWVDNLIRNPVLIPYTLGSKLLDKIYLDTTFATKSDAYQTFASK 179
Query: 169 AQQIWVWPERLQT 181
A+ I E++QT
Sbjct: 180 AEGIRELLEKVQT 192
>gi|448104432|ref|XP_004200270.1| Piso0_002850 [Millerozyma farinosa CBS 7064]
gi|359381692|emb|CCE82151.1| Piso0_002850 [Millerozyma farinosa CBS 7064]
Length = 688
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 59/212 (27%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAW-----------------ARGPLFCSR 44
++VD + E + YFLTH HSDH G++ +W R L+CS
Sbjct: 188 VAVDAFNYSPHEEIEQYFLTHFHSDHYGGITKSWFYERVFGDDNDFSNDSKYRKILYCSE 247
Query: 45 LTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS----PSSGEKTF------VEVIAIDAN 94
+TA L ++F +D IR L + + + V P+ G++ + V I AN
Sbjct: 248 ITADLVRIRF-HIDQRFIRPLCLNKRYLVHVYDSSDLPNGGKEENGSDVPGLYVTLISAN 306
Query: 95 HCPGILGCSVMLLFR-----GDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDV---- 145
HCPG S + LF G +L+ GDFR + ++ L L +
Sbjct: 307 HCPG----SAIFLFESISLDGSSKFILHCGDFR---------VNKDILAHNLLNRFSLEY 353
Query: 146 -----VDILYLDNTYCNSSYAFPSREVAAQQI 172
+D +YLD TY SSY FP +E + +
Sbjct: 354 GCPFELDEVYLDTTYFMSSYNFPKQEKVCEAL 385
>gi|354543880|emb|CCE40602.1| hypothetical protein CPAR2_106370 [Candida parapsilosis]
Length = 737
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 39/196 (19%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLF-----------------CSRLTAKLFPLKFPGLDLS 60
YFLTH H+DH G+S WA +F C+ +T KL L F +D
Sbjct: 258 YFLTHFHADHYGGISKKWAYDRVFKDDTDYDNDAKYKRIIYCTEITGKLLTLYF-SIDPR 316
Query: 61 LIRVLDIGSWHSIS---VVSPSSGEKTFVE------VIAIDANHCPGILGCSVMLLFR-- 109
I+ + + + + + + + G VE V I ANHCPG + + LF
Sbjct: 317 FIKQMAMDTRYKVKDYGLADVADGGFKSVEDTPGLYVTPITANHCPG----AGIFLFESI 372
Query: 110 ---GDFGCLLYTGDFRWEASNERAEIGRNTLVKALK-DDV--VDILYLDNTYCNSSYAFP 163
G +L+ GDFR + + R V + + +D+ +D +YLD TY N +Y FP
Sbjct: 373 GLDGRIHRILHCGDFRVNMTILDHPLLRQFSVASQRIEDLLRIDKVYLDTTYMNPTYNFP 432
Query: 164 SREVAAQQIWVWPERL 179
+E+ + + E L
Sbjct: 433 KQELVCETVAQLFEHL 448
>gi|449020014|dbj|BAM83416.1| similar to DNA cross-link repair protein SNM1 [Cyanidioschyzon
merolae strain 10D]
Length = 694
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 10 RWTEGSQVYFLTHLHSDHTQGLSSAWARGP----LFCSRLTAKLFPLKFPGLDLSLIRVL 65
R +G +FLTH H+DH GL R L+ S +T + +++ D L+R L
Sbjct: 326 RANDGYYHFFLTHYHADHYGGLRRTHFRPGCDRRLYASPITVSILQVEYQFDDAVLVR-L 384
Query: 66 DIGSWHSISVVS--PSSGEKTFVEVIAIDANHCPGILGCSVMLLFR--GDFGCLLYTGDF 121
+G I++V S G K V+A DANHCPG +V+L+F+ +++ GD
Sbjct: 385 PVGDPDGITIVDRPGSPGAKPVARVLACDANHCPG----AVILIFQVFETGQTIIHCGDM 440
Query: 122 RWE--ASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
R+ N + R + V L++D TY + Y FP +E
Sbjct: 441 RYNPICMNRDPVLRRFAATEGDHVQRVAYLHIDTTYSDPRYDFPPQEA 488
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 223 IGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYS 282
IG+M +G +P +G L GS L E L +Y
Sbjct: 601 IGVMATGWCQASRPPRGCQRLDGSPADKC-------------SLLERLVLPSNHSCILYK 647
Query: 283 VPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLY 321
+PYS+HS ++E+ F++ +QP I V++++ ++ L+
Sbjct: 648 LPYSEHSSYSELRAFIDWIQPEQIVPTVATTAAHLQRLW 686
>gi|195999584|ref|XP_002109660.1| hypothetical protein TRIADDRAFT_53902 [Trichoplax adhaerens]
gi|190587784|gb|EDV27826.1| hypothetical protein TRIADDRAFT_53902 [Trichoplax adhaerens]
Length = 440
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 71/179 (39%), Gaps = 38/179 (21%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPL--------FCSRLTA------------KLFPLKF 54
+ YFL+HLH DH +GL S R L +CS +T KLF
Sbjct: 26 AHFYFLSHLHQDHMKGLDSPAFRTHLNGRPKSRIYCSEITKSILIKDANYSHLKLFLQSV 85
Query: 55 PGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC 114
P D I + S E V V + + HCPG S+M L G G
Sbjct: 86 PTNDKIFIELQ--------QTFDTSYTEIETVAVTFLPSGHCPG----SMMFLLEGKHGN 133
Query: 115 LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYC-NSSYAFPSREVAAQQI 172
+LYTGDFR E + + L +D +YLD T+C P R+ +QI
Sbjct: 134 ILYTGDFRMEGDEHKFMV-----YNYLSAITIDSVYLDTTFCLPEMMTIPKRKTITKQI 187
>gi|328767951|gb|EGF77999.1| hypothetical protein BATDEDRAFT_27168 [Batrachochytrium
dendrobatidis JAM81]
Length = 440
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 164/386 (42%), Gaps = 88/386 (22%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
Y LTH H+DH GL S + ++C+ +TAKL + L ++ +H I + +
Sbjct: 33 YLLTHAHADHMVGLVSLLSVNKVYCTPVTAKLLQTTMGASN--LFPIVFNKPFH-IQLAN 89
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTL 137
+ TF + A+HCPG S M+L GD G +L TGDF R+E ++L
Sbjct: 90 NKHLQITF-----LPAHHCPG----SAMILIIGDNGTILCTGDF-------RSEKRIDSL 133
Query: 138 VKALKDDVVDILYLDNTYCNSSYA-FPSR-EVAAQQIWVWPERLQTMHL------LGFHD 189
A+ +D +YLD T+ + ++ P+R E A I V +++++ +G+
Sbjct: 134 SFAIDRLSIDSVYLDTTFAHPNWMNLPTRLESANALIEVIKTYSESVNVYLQSKTIGYEH 193
Query: 190 I-------FTTKTSLTRVRAVPRYS------------------------------FSIDT 212
+ F TK +T R + +Y F +D
Sbjct: 194 LWVCLARHFNTKIYVTASRKI-KYELMDQCKKADEEWLHECTVSQFLTTDEQEARFFVDM 252
Query: 213 L---ESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEA 269
E T + I PS + W G GS ++ S+ + W+ G + +++
Sbjct: 253 CPKAELSKTKGCLLNIHPSAMFW------GRGSDSDAI--SHHTYWKRVSGFKDFIVQDL 304
Query: 270 LGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS---CYVDPLYYFGRL 326
S+ + + YS HS +E+ EF+ +++P + V+SSS + + L
Sbjct: 305 RDSMS------WRLLYSMHSSLSELIEFVAVLKPQRVYPTVTSSSNAMFFPKQIMKHFML 358
Query: 327 CRANQPPLRYKQEKRVQHKTVVAAQI 352
+ + L Q +R++HK+V A +
Sbjct: 359 LNSTETAL---QARRLKHKSVTTADL 381
>gi|449480732|ref|XP_004176570.1| PREDICTED: LOW QUALITY PROTEIN: protein artemis [Taeniopygia
guttata]
Length = 654
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 40 LFCSRLTAKLFPL--KFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCP 97
L+CS +T +L K+ + ++ L++ + IS+ +SGEK V V + A HCP
Sbjct: 28 LYCSPVTKELLLTNWKYKFWENHIV-ALEVETPTQISLEDETSGEKEDVVVTLLPAGHCP 86
Query: 98 GILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNT 154
G SVM LF G+ G +LYTGDFR + E R L+ + +KD + +YLD T
Sbjct: 87 G----SVMFLFEGENGTVLYTGDFRL----AKGEAARMELLHSGTRVKD--IQSVYLDTT 136
Query: 155 YCNSS-YAFPSRE 166
+C+ Y PSRE
Sbjct: 137 FCDPKFYHIPSRE 149
>gi|332027906|gb|EGI67961.1| Protein artemis [Acromyrmex echinatior]
Length = 348
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 135/338 (39%), Gaps = 54/338 (15%)
Query: 6 ISVDRWTE---GSQVYFLTHLHSDHTQGLSSAW------ARGPLFCSRLTAKLFPLK-FP 55
ISVDR+ S VYFL+H H DH GL++ + L+CS +T K +
Sbjct: 14 ISVDRFDRENMNSSVYFLSHCHIDHMCGLNNMFFDHLKQYNKYLYCSHITKVFLENKYYE 73
Query: 56 GLDLSLIRVLDIGSWHSISVVSPS---SGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
L V DI + + S S E + V A HCPG SVM +F
Sbjct: 74 NLRNVETYVKDIEVDKKVCIEYRSNYNSEETDILFVTFTSAGHCPG----SVMFVFEKMN 129
Query: 113 GCLLYTGDFRWEASNER--AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAF-PSR---- 165
+LYTGDFR + R + N K D +YLD T+ +A+ P+R
Sbjct: 130 KLILYTGDFRINPKDYRKIKSLNCNDFPKKF-----DNIYLDTTFLGHDFAYLPTRIESI 184
Query: 166 EVAAQQIWVWPER-------LQTMHLLGFHDIF-----TTKTSLTRVRAVPRYSFSIDTL 213
V + + W + L+ L G ++ + KT + V I L
Sbjct: 185 NVMCKVVKEWLDESPRKVVILECSALYGSEFLYMKLSESLKTLIHVKECVYNSYIRIPEL 244
Query: 214 ESLNTMHPTIGIMPSGL-PWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGS 272
T +P + + + +V + ++ S+ KW+ + +G
Sbjct: 245 ACHVTNNPLDARIHACMSKYVCMNRQDILTIVPSV-----KKWKGHDTS-------VVGE 292
Query: 273 VDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIV 310
D+F + ++V YS H+ F E+++F+ +P I V
Sbjct: 293 WDKFREKTFNVCYSTHASFDELKKFIQYFKPKKIHPCV 330
>gi|401417715|ref|XP_003873350.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489579|emb|CBZ24837.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 771
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 32/181 (17%)
Query: 10 RWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS 69
R G++++FLTH H+DH +GLSS+W G + LT +L KF GL RVL +
Sbjct: 20 RSGSGTELFFLTHFHTDHMKGLSSSWTTGLIITGTLTRQLLLNKFEGLR---GRVLGLPF 76
Query: 70 WHSISVVSPS----SGEKTFVEVIA-------IDANHCPGILGCSVMLLFRGDFGCL-LY 117
W V+S S G ++ +A + A H PG S M+ G L+
Sbjct: 77 WCRTPVLSASGAAHGGRESAATTVAPVVYVTLLPAFHIPG----SAMIYIETPSGVTYLH 132
Query: 118 TGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPE 177
TGDF++ + + + L + VD LYLD+T+ + +A ++ WP
Sbjct: 133 TGDFKYTETAAQV----SPLRTFFQSHRVDHLYLDDTWLHLGHA---------ELKSWPA 179
Query: 178 R 178
R
Sbjct: 180 R 180
>gi|350409885|ref|XP_003488876.1| PREDICTED: protein artemis-like [Bombus impatiens]
Length = 159
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 6 ISVDRW---TEGSQVYFLTHLHSDHTQGLSSAW------ARGPLFCSRLTAKLFPLKFPG 56
ISVDR+ S ++FL+H HSDH GLS + + +CS ++ L +F
Sbjct: 14 ISVDRFDGENLTSSIFFLSHCHSDHMHGLSDTFFEYIDEYKKCFYCSPISKALLESRF-K 72
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLL 116
S ++ + I I ++ + EK + V +I A HCPG SVM LF D +L
Sbjct: 73 FKSSCVKEIGINIPSVIEYITENE-EKILICVTSIPAGHCPG----SVMFLFEKDNISVL 127
Query: 117 YTGDFRWEASN-ERAEIGRNTLVKALK 142
YTGDFR + + ++ + V+ +K
Sbjct: 128 YTGDFRINPIDFPKLKVDKKVCVEYMK 154
>gi|321471014|gb|EFX81988.1| hypothetical protein DAPPUDRAFT_49525 [Daphnia pulex]
Length = 288
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 30/187 (16%)
Query: 6 ISVDRW--TEGSQVYFLTHLHSDHTQGLSS-----AWARGP---LFCSRLTAKLF---PL 52
I+VD + + S FL+H H+DH +GL S P ++CS T K+ P+
Sbjct: 19 IAVDYFLNVQSSLALFLSHCHADHMKGLDSHDLYHTVRTKPGLFIYCSGTTKKILTDWPI 78
Query: 53 K------FPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVML 106
F L+L+ +D + S + K V +I + HCPG SVM
Sbjct: 79 YSKLAPYFKVLELNHTVKIDFPGGY----CSDDNSSKIGFCVTSIPSGHCPG----SVMF 130
Query: 107 LFRGDFGCLLYTGDFRWEASNER--AEIGRNTLVKALKDDVVDILYLDNTYC-NSSYAFP 163
L+ G FG +LYTGDFR + R N +D +YLD T+C +S+ FP
Sbjct: 131 LYEGPFGTVLYTGDFRIAKGDSRKFQAFMSNPSRPEYGLKTIDHVYLDCTFCTDSAKTFP 190
Query: 164 SREVAAQ 170
SR+ +
Sbjct: 191 SRQTSVD 197
>gi|340372537|ref|XP_003384800.1| PREDICTED: protein artemis-like [Amphimedon queenslandica]
Length = 606
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 34/174 (19%)
Query: 4 GLISVDRWTEGS----QVYFLTHLHSDHTQGLSS-------AWARGPLFCSRLTAKLFPL 52
GL+ VDR+ + + +FL+H H DH GL S + +CS +T L
Sbjct: 13 GLV-VDRFNPVNCRRGRAFFLSHCHKDHMSGLDSDELLKVLKELKIDFYCSEVTHALLS- 70
Query: 53 KFPGLDLSLIRVLDIGSWHSISV---VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR 109
PG + ++ + +IS+ + + V V + A HCPG SVM LF+
Sbjct: 71 NDPGFSHLMPYLVSVPVGETISLKLNTFRNEDQVVTVNVTLLPAGHCPG----SVMFLFQ 126
Query: 110 GDFGCLLYTGDFRWEASNERA------EIGRNTLVKALKDDVVDILYLDNTYCN 157
GD G +LYTGDFR S+ R + G+ +KA LYLD T+C+
Sbjct: 127 GDAGNVLYTGDFRLSLSDIRGCGPLHTDDGKVIEIKA--------LYLDTTFCH 172
>gi|150864521|ref|XP_001383367.2| hypothetical protein PICST_56782 [Scheffersomyces stipitis CBS
6054]
gi|149385777|gb|ABN65338.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 628
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 81/191 (42%), Gaps = 41/191 (21%)
Query: 18 YFLTHLHSDHTQGLSSAWA-----------------RGPLFCSRLTAKLFPLKFPGLDLS 60
YFLTH HSDH G+S W+ R ++C+++T L F +D
Sbjct: 150 YFLTHFHSDHYGGISKKWSYERVFKEDTDFDNDSKYRRIIYCTKITGVLLTRCF-SVDPR 208
Query: 61 LIRVLDIGSWHSI-SVVSPSSGEKTFVE-------------VIAIDANHCPGILGCSVML 106
I+ L++ + + I S V + G + V I ANHCPG S +
Sbjct: 209 FIKHLEMETRYIIKSFVDMTQGTSYLQDGGFPSQKCDPGLYVTPITANHCPG----SAIF 264
Query: 107 LFR-----GDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYA 161
LF G + +L+ GDFR S + + ++ +D +YLD TY Y
Sbjct: 265 LFESYGVDGSYRTILHCGDFRVNESILKHPLLYRFNIENENSIPLDKVYLDTTYMAPEYN 324
Query: 162 FPSREVAAQQI 172
FP +E+ + I
Sbjct: 325 FPKQELVCETI 335
>gi|170579436|ref|XP_001894830.1| hypothetical protein Bm1_16865 [Brugia malayi]
gi|158598434|gb|EDP36325.1| hypothetical protein Bm1_16865 [Brugia malayi]
Length = 524
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 66/222 (29%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL----IRVLDIGSWHSIS 74
FL+ HS + L S W + CS +TAKL + G + IR LD+ WH +
Sbjct: 31 FLSSAHSRQCRKLVSEWQCNRICCSPITAKLLSVISTGRKYKISDKWIRPLDLNVWHKME 90
Query: 75 VVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC----LLYTGDFRWEASNERA 130
V+ +DANH PG SVML+ + +LYTG FR +A R
Sbjct: 91 R----------FRVMLVDANHAPG----SVMLIIEREHHSTLRRILYTGFFRADAKFYRN 136
Query: 131 EIGRNTLVKALKDDVVDILYLDNTYCN-SSYAFPSREVAAQ------------------- 170
IG + AL++ D++ +D++Y + + FPSR+ +A+
Sbjct: 137 VIG----LSALQEKKFDLICIDSSYVDFTDGEFPSRQSSAKKAAELLRKLKYNGVSGVAI 192
Query: 171 --------------------QIWVWPERLQTMHLLGFHDIFT 192
+IW+ PER + +LG D F+
Sbjct: 193 PVPLIGCESLLVNISRQLECKIWLHPERFEIAGILGIKDYFS 234
>gi|344228830|gb|EGV60716.1| hypothetical protein CANTEDRAFT_110531 [Candida tenuis ATCC 10573]
Length = 555
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 38/187 (20%)
Query: 16 QVYFLTHLHSDHTQGLSSAWA-----------------RGPLFCSRLTAKLFPLKFPGLD 58
++YFL+H H+DH G+S W R ++CS+ T L LKF G+D
Sbjct: 68 EIYFLSHFHADHYGGISKKWCYERVFESVDDFKDESMYRPLIYCSKTTGNLLTLKF-GID 126
Query: 59 LSLIRVLDIGSWHSI---SVVSP-----SSGEKTFVEVIAIDANHCPGILGCSVMLLFRG 110
I L+ + + +SP S + + V ++ANHCPG S + LF
Sbjct: 127 PRFIESLEFDVLYRVMRFDSMSPAFEKVSEMDIEGIYVTMMEANHCPG----SGIFLFES 182
Query: 111 DFGC-----LLYTGDFRWEASN-ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPS 164
L+ GDFR + + R TL + DV+D +YLD TY + FP
Sbjct: 183 KSTMASSKKYLHCGDFRVNKQMIQHKSLERFTLPNST--DVLDKVYLDTTYLSFQRRFPK 240
Query: 165 REVAAQQ 171
+++ +
Sbjct: 241 QDLVCSE 247
>gi|170072495|ref|XP_001870192.1| DNA cross-link repair 1A protein [Culex quinquefasciatus]
gi|167868761|gb|EDS32144.1| DNA cross-link repair 1A protein [Culex quinquefasciatus]
Length = 730
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 25/146 (17%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFL+H H+DH GL ++ + PL S +TA L F +D +LD+ H V+
Sbjct: 350 YFLSHFHADHYIGLKKSFDK-PLIMSPITASLV-AAFINVDRVHYILLDL---HETIVLD 404
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAEIGRNT 136
V + A+DANHCPG +V+ LF+ G LL+TGDFR + E N
Sbjct: 405 -------GVRITALDANHCPG----AVLFLFQLPTGTNLLHTGDFRASPAMEEYPEFWNM 453
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAF 162
+ LYLD TY ++ Y F
Sbjct: 454 DIHT--------LYLDTTYLSTKYCF 471
>gi|260814123|ref|XP_002601765.1| hypothetical protein BRAFLDRAFT_215154 [Branchiostoma floridae]
gi|229287067|gb|EEN57777.1| hypothetical protein BRAFLDRAFT_215154 [Branchiostoma floridae]
Length = 387
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 87/180 (48%), Gaps = 24/180 (13%)
Query: 2 EKGLISVDRWTEGSQV----YFLTHLHSDHTQGLSS--------AWARGPLFCSRLTAKL 49
E +S+DR+ +G + +FL+H H DH GL + A + L+CS +T L
Sbjct: 10 EYRYLSIDRF-DGENLESWAFFLSHAHRDHMVGLDNPGFLSRLKASLKTRLYCSDITKAL 68
Query: 50 F--PLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLL 107
+F L+ ++ V I + S++V +G++ + V + A HCPG SVM L
Sbjct: 69 LLTEKQFKPLEPYIVSV-QIDTPTSLTVTDEVTGKEHSLLVTLLQAGHCPG----SVMFL 123
Query: 108 FRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAF-PSRE 166
F G G +LYTGDFR A+ LKD + LY+D T+ + PSRE
Sbjct: 124 FEGLEGTVLYTGDFRLPVGGA-AQFQHLHQGDRLKD--IQSLYVDTTFLVPEAKYIPSRE 180
>gi|170069015|ref|XP_001869076.1| DNA cross-link repair 1A protein [Culex quinquefasciatus]
gi|167865000|gb|EDS28383.1| DNA cross-link repair 1A protein [Culex quinquefasciatus]
Length = 757
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 25/146 (17%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFL+H H+DH GL ++ + PL S +TA L F +D +LD+ H V+
Sbjct: 377 YFLSHFHADHYIGLKKSFDK-PLIMSPITASLV-AAFINVDRVHYILLDL---HETIVLD 431
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWEASNERAEIGRNT 136
V + A+DANHCPG +V+ LF+ G LL+TGDFR + E N
Sbjct: 432 -------GVRITALDANHCPG----AVLFLFQLPTGTNLLHTGDFRASPAMEEYPEFWNM 480
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAF 162
+ LYLD TY ++ Y F
Sbjct: 481 DIHT--------LYLDTTYLSTKYCF 498
>gi|321261541|ref|XP_003195490.1| hypothetical protein CGB_G0680W [Cryptococcus gattii WM276]
gi|317461963|gb|ADV23703.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 833
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 71/171 (41%), Gaps = 51/171 (29%)
Query: 22 HLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDI------GSWHSISV 75
H HSDH LS +W GP++CS TA L +I +L++ G + +
Sbjct: 374 HAHSDHYTNLSKSWNNGPIYCSETTANL-----------IIHMLEVDPKWVHGLPNDVPF 422
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-------GDFGC------------LL 116
P++G V V I+ANHCPG S + LF GD G L
Sbjct: 423 EMPNTGG---VTVTPIEANHCPG----SSIFLFEGRQTVNAGDSGFASPYVGSKRVFRYL 475
Query: 117 YTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167
+ GDFR + L A+ ++ YLD TY N Y FP + +
Sbjct: 476 HCGDFRANP--------QMVLHPAIARAPINTCYLDTTYLNPKYCFPPQPL 518
>gi|154334022|ref|XP_001563266.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060278|emb|CAM45688.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 809
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 32/177 (18%)
Query: 16 QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
+++FL+H H+DH +GLSS W G + LT +L KF GL RVL + W V
Sbjct: 67 ELFFLSHFHTDHMKGLSSNWTAGVIITGILTRELLLSKFEGLR---GRVLGLPFWCRTPV 123
Query: 76 VSPS--------SGEKTFVEVIAID---ANHCPGILGCSVMLLFRGDFGCL-LYTGDFRW 123
+S + S T V V+ + A H PG S M F G L+TGDF++
Sbjct: 124 LSAAGTAHSTSDSSATTAVSVVYVTLLPAFHIPG----SAMFFFETPSGVTYLHTGDFKY 179
Query: 124 EASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQ 180
+ +A + L + VD LYLD+T+ + +A ++ WP R +
Sbjct: 180 TEAVAQA----SPLRTFFQSHRVDHLYLDDTWLHLGHA---------ELTSWPARTE 223
>gi|428183181|gb|EKX52039.1| hypothetical protein GUITHDRAFT_65538 [Guillardia theta CCMP2712]
Length = 367
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 25/154 (16%)
Query: 16 QVYFLTHLHSDHTQGLSSAW-ARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSIS 74
+ +FL+H H DH GLS + G ++C++ T L +++ L + +
Sbjct: 30 EAFFLSHFHGDHYDGLSENFDGPGRIYCTKTTGDL-----------VVQELKVRKELVVC 78
Query: 75 VVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRWEAS-NERAEI 132
S +V +DANHCPG + +LLF + G + L+TGD R++ E E+
Sbjct: 79 YEYGESAHVCGAKVTFLDANHCPG----AALLLFELEDGTVHLHTGDMRYDKKMKEYPEL 134
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
+ ++D +YLD TYC+ + FP ++
Sbjct: 135 -------VCRRGLIDRVYLDTTYCHPKHVFPGQD 161
>gi|449549219|gb|EMD40185.1| hypothetical protein CERSUDRAFT_122252 [Ceriporiopsis subvermispora
B]
Length = 971
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 37/145 (25%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH- 71
E +++Y LTH H+DH GL++ G + CS AK L+ +R +D+ + +
Sbjct: 29 EPAKLYLLTHTHTDHLNGLAARSFSGRVICSH-DAKEMLLRHEIYSERALREMDLRAENM 87
Query: 72 ----------------------------SISVVSPSS---GEKTFVEVIAIDANHCPGIL 100
+++ +P++ EK V + A+DANHCPG
Sbjct: 88 KTFRHLKVEPRKTGDGGISYAGSRDLLTPLAMQTPTAIKLNEKRSVTITALDANHCPG-- 145
Query: 101 GCSVMLLFRGDFGCLLYTGDFRWEA 125
+VM L GD G +L+TGDFR EA
Sbjct: 146 --AVMYLVEGDEGAILHTGDFRAEA 168
>gi|255730817|ref|XP_002550333.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132290|gb|EER31848.1| predicted protein [Candida tropicalis MYA-3404]
Length = 687
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 47/194 (24%)
Query: 18 YFLTHLHSDHTQGLSSAWA------------------RGPLFCSRLTAKLFPLKFPGLDL 59
YFLTH H+DH G+S WA R ++C+ +T +L L+F +D
Sbjct: 209 YFLTHFHADHYGGISKKWAYERVFGLEDMDYENDSKYRKIIYCTGITGRLLTLRF-SIDP 267
Query: 60 SLIRVLDIGSWHSISVVSPSSGEKTFVE---------VIAIDANHCPGILGCSVMLLFR- 109
I+ L++ + + I + E VE V+ I ANHCPG + + LF
Sbjct: 268 RFIKELELDTRYKIKSYTDDFIENFGVESNDEDPGLYVVPICANHCPG----AAIFLFES 323
Query: 110 ----GDFGCLLYTGDFRWEAS-------NERAEIGRNTLVKALKDDVVDILYLDNTYCNS 158
+++ GDFR + + +NT+ LK +D +YLD TY +
Sbjct: 324 IGLDNQIHRIIHCGDFRVNKEILDNPTLRQFSLNKKNTIDGVLK---IDQVYLDTTYMSP 380
Query: 159 SYAFPSREVAAQQI 172
+ P +E+ +
Sbjct: 381 KHNLPKQELVCDVV 394
>gi|50289721|ref|XP_447292.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526602|emb|CAG60229.1| unnamed protein product [Candida glabrata]
Length = 736
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 21/158 (13%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FL+H HSDH GL +W G L+ S +T +L ++ + +I + + +
Sbjct: 318 FFLSHFHSDHYIGLKKSWTSGNLYSSPVTYELLKYRYTPKRKTNEDNENIT--NCLKALK 375
Query: 78 PSSGE--KTFVEVIAIDANHCPGILGCSVMLLFR-------GDFGCLLYTGDFRWEASNE 128
P + + V +DANHCPG + + LF G +L+TGDFR + ++
Sbjct: 376 PYNRVWLTDTISVTTLDANHCPG----ASLFLFEEWDSMKTGILKTILHTGDFR--SDDK 429
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
E ++K +D +YLD TY S++ FP++E
Sbjct: 430 LIE----EVLKYTNHREIDEIYLDTTYLLSTFTFPAQE 463
>gi|327298459|ref|XP_003233923.1| hypothetical protein TERG_05792 [Trichophyton rubrum CBS 118892]
gi|326464101|gb|EGD89554.1| hypothetical protein TERG_05792 [Trichophyton rubrum CBS 118892]
Length = 771
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 85/187 (45%), Gaps = 30/187 (16%)
Query: 3 KGLISVDRWTEGSQ-----VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLF--PLKF 54
G++ VD + + + FL+H+HSDH GL S R P ++CS T ++ K+
Sbjct: 5 NGIVEVDNFRKHPEWPAPLACFLSHVHSDHLVGLESL--RAPFVYCSAATREILLRIEKY 62
Query: 55 PGLDLSLIRVLDIGSWH---------SISVVSPSSGE---KTFVEVIAIDANHCPGILGC 102
P +L+ H I + P+ E + V DANHCPG
Sbjct: 63 PHRMNFAKGILESRKQHYKHLAKLLRPIPLQVPTEIELMPGNTIRVTLFDANHCPG---- 118
Query: 103 SVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSS-- 159
SVM L GD +LYTGD R EA ++ I L+ + D +D +YLD T+ S
Sbjct: 119 SVMFLIEGDGKAILYTGDIRAEAWWVQSLIRNPVLIPYNMGDRRLDTIYLDTTFATKSDI 178
Query: 160 -YAFPSR 165
FPS+
Sbjct: 179 HQVFPSK 185
>gi|159489990|ref|XP_001702972.1| predicted protein [Chlamydomonas reinhardtii]
gi|158270879|gb|EDO96710.1| predicted protein [Chlamydomonas reinhardtii]
Length = 760
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 15/91 (16%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFLTH HSDHT GL +++ G ++CS +TA+L + G+ ++R L++G + VV
Sbjct: 31 YFLTHAHSDHTIGLRKSFSAGVIYCSHVTARLL-IHDMGIRPEVVRPLEVG----VPVVI 85
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
+ V V +DANHCPG SVM LF
Sbjct: 86 ------SGVRVTPLDANHCPG----SVMFLF 106
>gi|67473862|ref|XP_652680.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56469553|gb|EAL47293.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|449704840|gb|EMD45008.1| DNA repair metallobeta-lactamase, putative [Entamoeba histolytica
KU27]
Length = 396
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
+G + + L+H HSDH GLSS W G + + +T L KF + L +
Sbjct: 40 KGYKYFLLSHFHSDHYLGLSSRWKCGIIIGTEITLNLVRYKFKVENEYL---------YV 90
Query: 73 ISVVSPSSGEKTFVE---VIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNER 129
I + +P+ E + + V AI+A H PG C ++ D L+ GDFR++++ +
Sbjct: 91 IPLNTPTYFEGSNNDGYIVTAIEAGHAPG--SCCFVIKRISDGIIYLHVGDFRFDSTLQN 148
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ 171
+ + + ++ L+LD TYC+ Y F R++ +
Sbjct: 149 DKNWKEYVFTQH----INTLFLDTTYCDPQYKFKERQIICNE 186
>gi|83314848|ref|XP_730538.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490291|gb|EAA22103.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 773
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 9 DRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIG 68
D E ++VYFLTH H+DH ++ + +F S +T KL + G+D + L +
Sbjct: 34 DEKKEITKVYFLTHFHADHYMNINKNFNEN-IFSSTITKKLL-INIIGVDEKYVHNLKVN 91
Query: 69 SWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRW 123
+ + E+I IDANHCPG SV++ F G +++TGDFR+
Sbjct: 92 KNYYLFN----------FEIILIDANHCPG----SVIIYFEFSNGTKIIHTGDFRY 133
>gi|353240561|emb|CCA72425.1| hypothetical protein PIIN_06361 [Piriformospora indica DSM 11827]
Length = 589
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 39/167 (23%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
G Y LTH HSDH LS++W GP++CS TA L + +D + L + +
Sbjct: 408 GVTAYLLTHAHSDHYTNLSASWKHGPIYCSETTANLV-IHMLNVDPKWVHPLPMDT---- 462
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC------------------- 114
V P +G V V I ANHCPG S + LF G
Sbjct: 463 KVELPDTG---GVTVTLIQANHCPG----SCLFLFEGKQTVNAGDSSFHSAFVGTARVFR 515
Query: 115 LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYA 161
L+ GDFR ++ ++ +D++YLD TY + +A
Sbjct: 516 YLHCGDFRA--------CPKHVSHPMIQGKRLDLIYLDTTYLDPKFA 554
>gi|327350308|gb|EGE79165.1| DNA repair protein [Ajellomyces dermatitidis ATCC 18188]
Length = 764
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
Query: 4 GLISVDRWTEGSQ-----VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPL--KFP 55
G++ VD + + FL+H+HSDH QGL S R P ++CS T ++ K+P
Sbjct: 6 GIVEVDYFRKNPDRPAPLACFLSHVHSDHLQGLESL--RAPFIYCSAATREILLRLEKYP 63
Query: 56 GLDLSLIRVLDIGSWH---------SISVVSPSSGE---KTFVEVIAIDANHCPGILGCS 103
+L+ H I + P+ E + V V DANHCPG +
Sbjct: 64 HRINFSKGILESRKKHYKHLSKLLRPIPLQVPTEIELSPRNNVRVTLFDANHCPG----A 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSSYAF 162
VM L G+ +LYTGD R E+ I L+ L +D +YLD T+ S +
Sbjct: 120 VMFLIEGNRKAILYTGDIRAESWWVDNLIRHPVLIPYTLGSKRLDKIYLDTTFATKSNVY 179
Query: 163 PSREVAAQQIWVWPERLQT 181
S A+ I E++QT
Sbjct: 180 QSFPSKAEGIRELLEKIQT 198
>gi|157866374|ref|XP_001681893.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125192|emb|CAJ03154.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 775
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 16 QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
+++FLTH H+DH +GLSSAW G + +T +L KF GL RVL + W V
Sbjct: 30 ELFFLTHFHTDHMKGLSSAWTAGLIITGTITRQLLLNKFEGLR---GRVLGLPFWCRTPV 86
Query: 76 VSPSSGEKT-----------FVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGDFRW 123
+S + + V V + A H PG S M+ G L+TGDF++
Sbjct: 87 LSAAGAAHSETDSTTATAVPVVHVTLLPAFHIPG----SAMIYIETPSGVTYLHTGDFKY 142
Query: 124 EASNERAEIGRNTLVKALKDDVVDILYLDNTYCN 157
A ++L + VD LYLD+T+ +
Sbjct: 143 ----TEAAAQMSSLRTFFQSHRVDHLYLDDTWLH 172
>gi|225680684|gb|EEH18968.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 722
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 127/288 (44%), Gaps = 51/288 (17%)
Query: 4 GLISVDRWTEGSQ-----VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAK-LFPLKFPG 56
G++ VD + + + FL+H+HSDH QGL S R P ++CS T + L L+
Sbjct: 6 GIVEVDYFRKNPKRPAPLACFLSHVHSDHLQGLESL--RAPFIYCSAATREILLRLEKRP 63
Query: 57 LDLSLIR-VLDIGSWH---------SISVVSPSSGE---KTFVEVIAIDANHCPGILGCS 103
++ + +L+ H I + P+ E + V V DANHCPG +
Sbjct: 64 HRINFSKGILESRRQHYKHLSKLLRPIPLQVPTEIELSPRNHVRVTLFDANHCPG----A 119
Query: 104 VMLLFRGDFGCLLYTGDFR---WEASNERAEIGRNTLV--KALKDDVVDILYLDNTYCNS 158
VM L G+ +LYTGD R W N + RN ++ L D +D +YLD T+
Sbjct: 120 VMFLIEGNGKTILYTGDIRAESWWVGN----LIRNPVLIPYTLGDKRLDKIYLDTTFATK 175
Query: 159 S---YAFPSREVAA----QQIWVWPERLQTMHLL-----GFHDIFTTKTSLTRVRAVPRY 206
S +FPS+ ++I +PE T+ L G+ DI+ +S + +
Sbjct: 176 SDVYQSFPSKAEGIRELLEKINAYPE--DTIFYLRVWTFGYEDIWLALSSALNTK-IHVD 232
Query: 207 SFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSK 254
+ I+ +SL T T G ++ G PG L ++S+
Sbjct: 233 QYQIELYKSL-TPRATNGFGVDKTAFLCGFTLGNAHAPGCLTDDHKSR 279
>gi|325093010|gb|EGC46320.1| DNA repair protein [Ajellomyces capsulatus H88]
Length = 705
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 9 DRWTEGSQVYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPL--KFPGLDLSLIRVL 65
++ E FL+H+HSDH QGL S R P ++CS T ++ K+P +L
Sbjct: 26 NKLDEAPLACFLSHVHSDHLQGLES--LRAPFIYCSAATREILLRLEKYPHRINFSKGIL 83
Query: 66 DIGSWH---------SISVVSPSSGE---KTFVEVIAIDANHCPGILGCSVMLLFRGDFG 113
+ H I + P+ E + + V DANHCPG +VM L G+
Sbjct: 84 ESRKQHYKHLSKLLRPIPLQVPTEIELSPRNNIRVTLFDANHCPG----AVMFLIEGNGK 139
Query: 114 CLLYTGDFRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+LYTGD R E+ I L+ L ++D +YLD T+ S + + A+ I
Sbjct: 140 AILYTGDIRAESWWVDNLIRNPVLIPYTLGSKLLDKIYLDTTFATKSDVYQTFASKAEGI 199
Query: 173 WVWPERLQT 181
E++QT
Sbjct: 200 RELLEKVQT 208
>gi|300121917|emb|CBK22491.2| unnamed protein product [Blastocystis hominis]
Length = 468
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 63/217 (29%)
Query: 9 DRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIG 68
D + G V+F +H H+DH QGL+ + G +F + T L KF +D + L IG
Sbjct: 101 DFFRSGCSVFF-SHFHTDHMQGLTKKFI-GDIFATPTTCNLVANKF-QIDRHHLHPLRIG 157
Query: 69 SWHSISV--------------------------------VSPSSGEKTFVEVIAIDANHC 96
+ ++ VS S+ + V V IDANHC
Sbjct: 158 EHYYLTNCKTQHIPAVMEWIHREDPSYPLNSTSLILNENVSDSALQTRLVRVDVIDANHC 217
Query: 97 PGILGCSVMLLFR---------------GDFGCLLYTGDFRWEASNERAEIGRNTLVKAL 141
PG S M LF F +LYTGDFR+E + + + +++
Sbjct: 218 PG----SCMFLFSLFDWNETTDPHKPSFHLFYRVLYTGDFRFE-----SRMLDDGILRRF 268
Query: 142 KD---DVVDILYLDNTYCNSSYAFPSRE-VAAQQIWV 174
D + +D+L +DNTY N +Y FP ++ V WV
Sbjct: 269 SDNRGESLDLLMVDNTYNNEAYNFPRQQCVVNTAAWV 305
>gi|212721348|ref|NP_001131576.1| uncharacterized protein LOC100192920 [Zea mays]
gi|194691900|gb|ACF80034.1| unknown [Zea mays]
Length = 280
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 106/246 (43%), Gaps = 40/246 (16%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDD 144
V V ++ANHCPG + ++ FR D L+TGDFR + + + L+
Sbjct: 24 VTVTLLEANHCPG----AALIHFRLSDGKTCLHTGDFRASKTMQSHPL--------LQRG 71
Query: 145 VVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL-----QTMHLLGFHDIFTTKTSLTR 199
V+++YLD TYCN Y FP +E + R +T+ ++G + I L
Sbjct: 72 RVNLVYLDTTYCNPKYKFPPQEDVIDFVVRTTRRYLKKQPKTLIVVGAYSIGKENVYLAI 131
Query: 200 VRAVPR------------YSFSIDTLE----SLNTMHPTIGIMPSGLPWVVKPLKGGGSL 243
+A+ YSF L S N ++ ++P G K +L
Sbjct: 132 SQALEAHIYTDASRRRILYSFGWPDLSKRLCSCN-QSSSLHVLPLGSINHENLKKYLETL 190
Query: 244 PGSLFSSYQSKWRATGGTQTEKLKEALGSV---DRFHKYIYSVPYSDHSCFTEIEEFLNL 300
G + +R TG T +E + L + + IY VPYS+HS FTE+ +F+
Sbjct: 191 NGRFLAVL--AFRPTGWTFSEATGKHLDLIKPSSNANVTIYGVPYSEHSSFTELRDFVMF 248
Query: 301 VQPSNI 306
++P I
Sbjct: 249 LKPQKI 254
>gi|326435694|gb|EGD81264.1| hypothetical protein PTSG_11300 [Salpingoeca sp. ATCC 50818]
Length = 699
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 31/166 (18%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
+VD ++ G+ YFL+H H+DH GL+ ++ ++CS TA+L L L
Sbjct: 378 FTVDAFSYGAIPNCTAYFLSHFHADHYTGLTKSFP-AKVYCSEATARLCTL--------L 428
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL-LYTGD 120
+RV + + + +P + VE+I DANHCPG + +++F G ++TGD
Sbjct: 429 LRV-PPEKLNPLPMNTPVKVQGVTVELI--DANHCPG----AAVIVFTLPSGRRHVHTGD 481
Query: 121 FR-WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
FR EA I ++T + + + +YLD TYC+ Y FPS+
Sbjct: 482 FRACEA------IWQHTSIAGKR---IHTVYLDTTYCDPRYTFPSQ 518
>gi|407851646|gb|EKG05451.1| hypothetical protein TCSYLVIO_003474 [Trypanosoma cruzi]
Length = 522
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 74/175 (42%), Gaps = 50/175 (28%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG------LDLSL------IRV 64
VY L+H H+DH +GLS +W G + C +T L K+ G + L L +R+
Sbjct: 22 VYLLSHFHTDHMKGLSHSWCAGLIICEAVTRALLIQKYGGCMEKCSVSLPLFQRTPFLRM 81
Query: 65 LDIGSWHSISVVSPSS------------------------GEKTFVEVIAIDANHCPGIL 100
+ S S V+P S GE V + + A H PG
Sbjct: 82 VTTIS----SKVAPDSVEEREVVLDTVKDNGSDENCGSNFGEDEMVMLYLLPAFHIPG-- 135
Query: 101 GCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTY 155
SVM FG +LYTGDF+++ E R L D VD +Y+D+T+
Sbjct: 136 --SVMFFLETPFGNVLYTGDFKYD------EYARRRLDPFFADHAVDHVYVDDTW 182
>gi|212540178|ref|XP_002150244.1| DNA repair protein, putative [Talaromyces marneffei ATCC 18224]
gi|210067543|gb|EEA21635.1| DNA repair protein, putative [Talaromyces marneffei ATCC 18224]
Length = 641
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 91/194 (46%), Gaps = 30/194 (15%)
Query: 3 KGLISVDRWTEGSQ-----VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPL--KF 54
G+++VD + + V FL+H+HSDH QGL S R P ++CS +T +L KF
Sbjct: 5 NGIVTVDYFRKVPDKPPPLVCFLSHVHSDHLQGLES--FRSPFIYCSAVTRELLLRLEKF 62
Query: 55 PGLDLSLIRVLDIGSWH---------SISVVSPSSGEKT---FVEVIAIDANHCPGILGC 102
P +L+ H I + +P+ E T V V +DANHC G
Sbjct: 63 PHRMNFSKGILEARKQHYGHLAKILRPIPLNTPTEIELTPLQRVRVTLLDANHCAG---- 118
Query: 103 SVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYC---NS 158
+VMLL G +LYTGD R E+ + I LV A +D +YLD T+ N
Sbjct: 119 AVMLLIEGQGKAILYTGDIRAESWWVNSLIRHPALVPYACGLKTLDNIYLDTTFAVKSNI 178
Query: 159 SYAFPSREVAAQQI 172
FPS+ +++
Sbjct: 179 YRHFPSKAEGIKEL 192
>gi|156404099|ref|XP_001640245.1| predicted protein [Nematostella vectensis]
gi|156227378|gb|EDO48182.1| predicted protein [Nematostella vectensis]
Length = 305
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 1 MEKGLISVDRWTE---GSQVYFLTHLHSDHTQGLSSAW-------ARGPLFCSRLTAKLF 50
+E +S+D + S YFL+H H DH QGL SA + +FCS T L
Sbjct: 9 LEYPQVSIDCFDNENLDSYAYFLSHCHRDHMQGLDSATFSDAIKSKKQRIFCSETTRNLL 68
Query: 51 --PLKFPGLDLSLIRV-LDIGSWHSISVVSPSSGEKTFVEVIAI---DANHCPGILGCSV 104
F L+ L + LD VV+P E EVI + A HC G SV
Sbjct: 69 LCDASFSHLEEYLTGIPLD-----QPFVVTPYDKETNKEEVITVTLFSAGHCVG----SV 119
Query: 105 MLLFRGDFGCLLYTGDFRWEASNER--AEIGRNTLVKALKDDVVDILYLDNTYC-NSSYA 161
M LF G G +LYTGDFR + + + N VK ++ +Y+D T+C +
Sbjct: 120 MFLFEGLKGNVLYTGDFRLATGDTKRITVLHCNGRVKDIRS-----VYIDTTFCLPKMMS 174
Query: 162 FPSREVAAQQIWVWPER 178
PSR+ I+ +R
Sbjct: 175 IPSRKETNDAIFKVIDR 191
>gi|326482813|gb|EGE06823.1| DNA repair protein [Trichophyton equinum CBS 127.97]
Length = 763
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 30/187 (16%)
Query: 3 KGLISVDRWTEGSQ-----VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLF--PLKF 54
G++ VD + + + FL+H+HSDH GL S R P ++CS T ++ K+
Sbjct: 5 NGIVEVDSFRKHPEWPAPLACFLSHVHSDHLVGLESL--RAPFVYCSAATREILLRIEKY 62
Query: 55 PGLDLSLIRVLDIGSWH---------SISVVSPSSGE---KTFVEVIAIDANHCPGILGC 102
P +L+ H I + P+ E + V DANHCPG
Sbjct: 63 PHRMNFAKGILESRKQHYKHLAKLLRPIPLRVPTEIELMPGNTIRVTLFDANHCPG---- 118
Query: 103 SVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSS-- 159
SVM L GD +LYTGD R E+ ++ I L+ + D +D +YLD T+ S
Sbjct: 119 SVMFLIEGDGKAILYTGDIRAESWWVQSLIRNPVLIPYTMGDRRLDTIYLDTTFATKSDI 178
Query: 160 -YAFPSR 165
FPS+
Sbjct: 179 HQVFPSK 185
>gi|241747538|ref|XP_002414332.1| DNA cross-link repair protein pso2/snm1, putative [Ixodes
scapularis]
gi|215508186|gb|EEC17640.1| DNA cross-link repair protein pso2/snm1, putative [Ixodes
scapularis]
Length = 248
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 89/197 (45%), Gaps = 35/197 (17%)
Query: 6 ISVDRW---TEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLI 62
IS+DR+ S +FL+H H DH GLSS F +RL A+ KF ++S
Sbjct: 14 ISIDRFDGINLNSTAFFLSHCHRDHMHGLSSTA-----FKTRLRARP-DAKFYVSEVSRQ 67
Query: 63 RVLDIGSW-----HSI--------SVVSPSSGEKTFVE----VIAIDANHCPGILGCSVM 105
+L+ + H+I +V P++G+ + V I A HC G SVM
Sbjct: 68 LLLNEPKYAWLKRHTIALPLDCPNTVTVPTNGDDHGPDYELVVTPISAEHCAG----SVM 123
Query: 106 LLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAF-PS 164
L GD G +LYTGDFR + + A+K+ + Y+D T C A+ PS
Sbjct: 124 FLLEGDCGRVLYTGDFRLAVGDSERLTALHEPSGAVKN--IRCAYVDTTLCTPEAAYVPS 181
Query: 165 RE--VAAQQIWVWPERL 179
RE VAA P L
Sbjct: 182 REDSVAALITLAKPTIL 198
>gi|326474617|gb|EGD98626.1| hypothetical protein TESG_06106 [Trichophyton tonsurans CBS 112818]
Length = 763
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 88/194 (45%), Gaps = 30/194 (15%)
Query: 3 KGLISVDRWTEGSQ-----VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLF--PLKF 54
G++ VD + + + FL+H+HSDH GL S R P ++CS T ++ K+
Sbjct: 5 NGIVEVDSFRKHPEWPAPLACFLSHVHSDHLVGLESL--RAPFVYCSAATREILLRIEKY 62
Query: 55 PGLDLSLIRVLDIGSWH---------SISVVSPSSGE---KTFVEVIAIDANHCPGILGC 102
P +L+ H I + P+ E + V DANHCPG
Sbjct: 63 PHRMNFAKGILESRKQHYKHLAKLLRPIPLRVPTEIELMPGNTIRVTLFDANHCPG---- 118
Query: 103 SVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSS-- 159
SVM L GD +LYTGD R E+ ++ I L+ + D +D +YLD T+ S
Sbjct: 119 SVMFLIEGDGKAILYTGDIRAESWWVQSLIRNPVLIPYTMGDRRLDTIYLDTTFATKSDI 178
Query: 160 -YAFPSREVAAQQI 172
FPS+ +++
Sbjct: 179 HQVFPSKAEGIREL 192
>gi|260947898|ref|XP_002618246.1| hypothetical protein CLUG_01705 [Clavispora lusitaniae ATCC 42720]
gi|238848118|gb|EEQ37582.1| hypothetical protein CLUG_01705 [Clavispora lusitaniae ATCC 42720]
Length = 623
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 95/237 (40%), Gaps = 62/237 (26%)
Query: 18 YFLTHLHSDHTQGLSSAWAR------GPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS-- 69
YFL+H HSDH G + W R ++CS +TA+L ++F ++ I L + +
Sbjct: 148 YFLSHFHSDHYGGFTKRWCRERTLDKKIVYCSEITARLLQIRF-NVEEQFIFPLKLNARC 206
Query: 70 --WHSISVVSPSSGEKTF---------------------------VEVIAIDANHCPG-- 98
W V+ SG+KT+ + V +IDANHCPG
Sbjct: 207 KVWDYGHAVNVCSGDKTYDNNGSRSAFEEGYMLNGGFYSEEKTPGLYVTSIDANHCPGAV 266
Query: 99 -ILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKAL-------KDDVVDILY 150
L S+ L F L+ GDFR + R L + V+D Y
Sbjct: 267 IFLFESISLSMESSFS--LHCGDFR---------VCRAMLEHPMILPFHIGGSSVLDKAY 315
Query: 151 LDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIF--TTKTSLTRVRAVPR 205
LD TY + + FP +E E+ L +++ F T ++ +T +PR
Sbjct: 316 LDTTYMSPEHNFPLQETVCDAAATLVEKFAEKGPL-YNEYFGTTLQSRITDFLQLPR 371
>gi|303322829|ref|XP_003071406.1| hypothetical protein CPC735_069430 [Coccidioides posadasii C735
delta SOWgp]
gi|240111108|gb|EER29261.1| hypothetical protein CPC735_069430 [Coccidioides posadasii C735
delta SOWgp]
Length = 769
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 38/205 (18%)
Query: 3 KGLISVDRWTEGS-----QVYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKL------F 50
G++ VD + + Q FL+H+HSDH QGL S R P ++CS T K+ +
Sbjct: 5 NGIVEVDYFRKNPDRPPPQACFLSHVHSDHLQGLESL--RSPFVYCSAATRKILLRIEKY 62
Query: 51 P--LKFPGLDLS--------LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGIL 100
P + F L L ++L H + + + G + + V +ANHCPG
Sbjct: 63 PHRMNFAKGILETRKQEYKHLAKLLRPIPLHVPTEIELTPG--STIRVTLFNANHCPG-- 118
Query: 101 GCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSS 159
+VM L G+ +LYTGD R E + I L+ L D +D +YLD T+ S
Sbjct: 119 --AVMFLIEGNGKAILYTGDVRAEPWWVESLIRNPILIPYTLGDCRLDRIYLDTTFAIKS 176
Query: 160 ---YAFPSREVAAQQIW----VWPE 177
AFPS+ +++ +PE
Sbjct: 177 DIYSAFPSKAEGIKELLHKVKAYPE 201
>gi|320582723|gb|EFW96940.1| DNA repair protein Pso2/Snm1, putative [Ogataea parapolymorpha
DL-1]
Length = 452
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 1 MEKGLISVDRWTEGSQ----VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPLKFP 55
E I+VD + VY LTH HSDH GL+ W G + + +T L KF
Sbjct: 77 FENHTIAVDAFCYAPHPAISVYLLTHFHSDHYGGLTKNWDHGSVIIVTPITRNLLVYKF- 135
Query: 56 GLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL 115
G++ L+ +D +I V T +++ +DANHCPG S + +
Sbjct: 136 GVNPDLLLSVDYNQ--TIEV------PHTDLKITCLDANHCPG----SGIFVIESPGLRY 183
Query: 116 LYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIW-V 174
L+ GD R I + L ++ +YLD TY N Y FP +E+ ++ +
Sbjct: 184 LHCGDCR---------INKPMLESLMQIGRFHKIYLDTTYLNPLYNFPKQEIVIDELCKL 234
Query: 175 WPERLQTMHL 184
+++TM
Sbjct: 235 LQSKMETMQF 244
>gi|345483403|ref|XP_003424812.1| PREDICTED: protein artemis-like [Nasonia vitripennis]
Length = 396
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 6 ISVDRW---TEGSQVYFLTHLHSDHTQGLSSAW------ARGPLFCSRLTAKLFPLKFPG 56
IS+DR+ S +FL+H H+DH +GL+ + L+CS +T + KFP
Sbjct: 14 ISIDRFDGDNLNSSAFFLSHGHTDHMKGLNYDFFHFLKRKDSFLYCSHITKLIVENKFPK 73
Query: 57 LDLSLIR----VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
D +I ++I + I+ V G + + V + + HCPG SVM L
Sbjct: 74 FDRCIIEKHLIQINIDELNVINYV--HCGTQVSITVTCVPSGHCPG----SVMFLLNFGD 127
Query: 113 GCLLYTGDFRWEASN----ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYA-FPSR 165
+LYTGDFR + + N+ L+ +D +YLD T+ + + PSR
Sbjct: 128 KRILYTGDFRISIEDISKLKSLHYTTNSQRLPLQ---IDKIYLDTTFLDVDFQILPSR 182
>gi|440494333|gb|ELQ76726.1| tRNase Z [Trachipleistophora hominis]
Length = 360
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 23/141 (16%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSP 78
FLTH HSDH GL ++ + +FCS TA L L +D+ I +++ + + + V
Sbjct: 51 FLTHFHSDHYYGLKRSFNKN-IFCSTTTANLVKLNI-KVDVKYINEMEMNTVYRVDNV-- 106
Query: 79 SSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLV 138
+++ +ANHCPG +G +F L+TGDFR+ N +L+
Sbjct: 107 --------DIMCFEANHCPGAVG----FIFCVQNVYYLHTGDFRF---NVEMHANLQSLI 151
Query: 139 KALKD----DVVDILYLDNTY 155
++ + D ++ DNTY
Sbjct: 152 SIVRPGNNVNYFDTVFYDNTY 172
>gi|315041635|ref|XP_003170194.1| hypothetical protein MGYG_07438 [Arthroderma gypseum CBS 118893]
gi|311345228|gb|EFR04431.1| hypothetical protein MGYG_07438 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 30/194 (15%)
Query: 3 KGLISVDRWTEGSQ-----VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLF--PLKF 54
G++ VD + + + FL+H+HSDH GL S R P ++CS T ++ K+
Sbjct: 5 NGIVEVDSFRKNPEWPAPLACFLSHVHSDHLTGLESL--RAPFVYCSTATREILLRIEKY 62
Query: 55 PGLDLSLIRVLDIGSWH---------SISVVSPSSGE---KTFVEVIAIDANHCPGILGC 102
P +L+ H I + P+ E + V DANHCPG
Sbjct: 63 PHRMNFAKGILESRKQHYKHLAKLLRPIPLQVPTEIELMPGNTIRVTLFDANHCPG---- 118
Query: 103 SVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSS-- 159
SVM L G + YTGD R EA ++ + L+ + D +D +YLD T+ S
Sbjct: 119 SVMFLIEGGDKAIFYTGDIRAEAWWVQSLVRNPVLIPYTMGDCRLDTIYLDTTFATKSDI 178
Query: 160 -YAFPSREVAAQQI 172
FPS+ Q++
Sbjct: 179 HQVFPSKAEGIQEL 192
>gi|190345216|gb|EDK37067.2| hypothetical protein PGUG_01165 [Meyerozyma guilliermondii ATCC
6260]
Length = 736
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 49/219 (22%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWA-----------------RGPLFCSR 44
+SVD ++ E YFLTH H+DH G++ W+ R ++ S
Sbjct: 243 VSVDAFSFAPHESISQYFLTHFHADHYGGITKKWSYNRVFSSLEEYEDETKFRRIIYASE 302
Query: 45 LTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVE--------------VIA 90
+T++L L+F G+D I+ L + + + SG V+ V
Sbjct: 303 VTSRLLTLRF-GIDPRFIKDLKFDTRYCVKFYD-DSGSPVDVQDGGYESNDSVPGLYVTP 360
Query: 91 IDANHCPGILGCSVMLLFRG---DFGC--LLYTGDFRWEASNERAEIGRNTLVKALKDD- 144
I ANHCPG + + LF D +L+ GDFR SN + T A+
Sbjct: 361 ITANHCPG----AAIFLFESISRDLKVYRILHCGDFR--VSNVILQHPLLTPFHAVGGSR 414
Query: 145 VVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMH 183
+D +YLD TY + Y FP +E+ + + RL H
Sbjct: 415 ALDKVYLDTTYMDPKYNFPKQELVCETVANMFHRLVYAH 453
>gi|146419523|ref|XP_001485723.1| hypothetical protein PGUG_01394 [Meyerozyma guilliermondii ATCC
6260]
Length = 651
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS-LIRV 64
++ D++ + ++ L+H H+DHT GL + ++CS+ T KL + LIR
Sbjct: 19 VAADKFNCNASIFLLSHHHADHTIGLRNRTFNRRVYCSKGTKKLLESNESYNHIQHLIRA 78
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
LD ++++V E T V V I + HCPG S M L D ++YTGD R E
Sbjct: 79 LDYNRQYTLNV--EQDKEITLVVVTLIPSYHCPG----SCMFLIEQDEKAVIYTGDIRAE 132
>gi|429965110|gb|ELA47107.1| hypothetical protein VCUG_01380 [Vavraia culicis 'floridensis']
Length = 386
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 23/158 (14%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSP 78
FLTH H+DH GL ++ + +FCS TA L L +D+ I+ + + + + V
Sbjct: 42 FLTHFHADHYYGLRKSFNKN-IFCSVTTANLVKLNI-KVDVKYIKEMAMNRVYRVDDV-- 97
Query: 79 SSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLV 138
+V+ +ANHCPG +G +F L+TGDFR+ N + L+
Sbjct: 98 --------DVMCFEANHCPGAVG----FIFCVQNFYYLHTGDFRF---NIDVHGNLHNLI 142
Query: 139 KALK--DDV--VDILYLDNTYCNSSYAFPSREVAAQQI 172
++ DD D ++ DNTY N + EV I
Sbjct: 143 SVMRPNDDAKCFDTVFYDNTYENYMHFDSQEEVICSVI 180
>gi|429962339|gb|ELA41883.1| hypothetical protein VICG_01067 [Vittaforma corneae ATCC 50505]
Length = 466
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 36/157 (22%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF--PLKFPGLDLSLIRVLDIGSWHSISV 75
YFL+H H+DH L+ ++ P+FCS+ T++L L + L + D GS
Sbjct: 42 YFLSHFHADHYTKLNKSF-EFPVFCSKTTSELVCAALGAKAVGLEMYTSYDFGS------ 94
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRN 135
FV V I+ANHCPG +V +F + +L+TGDFR+ +I
Sbjct: 95 ---------FV-VRLIEANHCPG----AVCFIFLINNQFVLHTGDFRYCKVYHTLDIS-- 138
Query: 136 TLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+YLDNTY N +FPS++ A +I
Sbjct: 139 ----------FKCVYLDNTYQN-FISFPSQKEAISKI 164
>gi|350596085|ref|XP_003360736.2| PREDICTED: DNA cross-link repair 1A protein-like [Sus scrofa]
Length = 964
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 65/143 (45%), Gaps = 26/143 (18%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + P++CS +T L K + I L I +
Sbjct: 741 EGCTAYFLTHFHSDHYAGLSKNFT-FPVYCSEVTGNLLKSKL-HVQEQYIHPLPIDTECV 798
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWEASNERAE 131
++ V+V+ +DANHCPG +VM+LF + DFR + + ER+
Sbjct: 799 VN----------GVKVVLLDANHCPG----AVMVLFHLPNXXXXXXXXDFRADPTMERS- 843
Query: 132 IGRNTLVKALKDDVVDILYLDNT 154
L V LYLD T
Sbjct: 844 --------LLAGQKVHTLYLDTT 858
>gi|392868391|gb|EJB11487.1| DNA repair protein [Coccidioides immitis RS]
Length = 775
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 33/187 (17%)
Query: 16 QVYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPL--KFPG-LDLS----------- 60
Q FL+H+HSDH QGL S R P ++CS T K+ K+P ++ +
Sbjct: 29 QACFLSHVHSDHLQGLESL--RSPFVYCSAATRKILLCIEKYPHRMNFAKGILETRKQEY 86
Query: 61 --LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYT 118
L ++L H + + + G + + V +ANHCPG +VM L G+ +LYT
Sbjct: 87 KHLAKLLRPIPLHVPTEIELTPG--STIRVTLFNANHCPG----AVMFLIEGNGKAILYT 140
Query: 119 GDFRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSS---YAFPSREVAAQQIW- 173
GD R E + I L+ L D +D +YLD T+ S AFPS+ +++
Sbjct: 141 GDVRAEPWWVESLIRNPILIPYTLGDCRLDRIYLDTTFAIKSDIYSAFPSKAEGIKELLH 200
Query: 174 ---VWPE 177
+PE
Sbjct: 201 KVKAYPE 207
>gi|296818323|ref|XP_002849498.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238839951|gb|EEQ29613.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 722
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 79/183 (43%), Gaps = 47/183 (25%)
Query: 3 KGLISVDRWTEGSQ-----VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPLK--- 53
G+I VD + + + FL+H+HSDH GL S R P ++CS T ++ P +
Sbjct: 5 NGIIEVDSFRKNPERPAPLACFLSHVHSDHLAGLESL--RAPFIYCSTATREV-PTEIEL 61
Query: 54 FPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG 113
PG ++V DANHCPG SVM L G
Sbjct: 62 MPG---------------------------NTIKVTLFDANHCPG----SVMFLIEGAGK 90
Query: 114 CLLYTGDFRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSS---YAFPSREVAA 169
+LYTGD R E ++ + L+ + D +D +YLD T+ S FPS+
Sbjct: 91 AILYTGDIRAEEWWVQSLVRNPVLIPYTMGDSRLDNIYLDTTFATKSDIHQVFPSKAEGI 150
Query: 170 QQI 172
Q++
Sbjct: 151 QEL 153
>gi|406604220|emb|CCH44306.1| Endoribonuclease ysh1 [Wickerhamomyces ciferrii]
Length = 704
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 4 GLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS--L 61
GL + E ++Y LTH H+DH +GL S+++ P++CS +T +L L P S
Sbjct: 2 GLFMNLKVLELVKLYLLTHAHADHLKGLDSSFSGHPVYCSEITKELLKLN-PKYSRSWPS 60
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
+R L H++ + S + + I A HCPG +VM L + +L TGD
Sbjct: 61 LRPLKENQRHTVPLKDGVS-----INLTLIPARHCPG----AVMFLVESNEKSILITGDI 111
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAF 162
R ER +G + L + DN Y ++++ +
Sbjct: 112 RA----ERDWVGSLPRNEFLFPYTTSLKKFDNIYLDTTFGY 148
>gi|190345415|gb|EDK37296.2| hypothetical protein PGUG_01394 [Meyerozyma guilliermondii ATCC
6260]
Length = 651
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS-LIRV 64
++ D++ + ++ L+H H+DHT GL + ++CS+ T KL + LIR
Sbjct: 19 VAADKFNCNASIFLLSHHHADHTIGLRNRTFNRRVYCSKGTKKLLESNESYNHIQHLIRA 78
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
LD ++++V E T V V I + HCPG S M L D ++YTGD R E
Sbjct: 79 LDYNRQYTLNV--EQDKEITSVVVTLIPSYHCPG----SCMFLIEQDEKAVIYTGDIRAE 132
>gi|146423725|ref|XP_001487788.1| hypothetical protein PGUG_01165 [Meyerozyma guilliermondii ATCC
6260]
Length = 736
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 45/208 (21%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWA-----------------RGPLFCSRLTAKLFPLKFP 55
E YFLTH H+DH G++ W+ R ++ S +T++L L+F
Sbjct: 254 ESISQYFLTHFHADHYGGITKKWSYNRVFSSLEEYEDETKFRRIIYASEVTSRLLTLRF- 312
Query: 56 GLDLSLIRVLDIGSWHSISVVSPSSGEKTFVE--------------VIAIDANHCPGILG 101
G+D I+ L + + + SG V+ V I ANHCPG
Sbjct: 313 GIDPRFIKDLKFDTRYCVKFYD-DSGSPVDVQDGGYESNDSVPGLYVTPITANHCPG--- 368
Query: 102 CSVMLLFRG---DFGC--LLYTGDFRWEASNERAEIGRNTLVKALKDD-VVDILYLDNTY 155
+ + LF D +L+ GDFR SN + T A+ +D +YLD TY
Sbjct: 369 -AAIFLFESISRDLKVYRILHCGDFR--VSNVILQHPLLTPFHAVGGSRALDKVYLDTTY 425
Query: 156 CNSSYAFPSREVAAQQIWVWPERLQTMH 183
+ Y FP +E+ + + RL H
Sbjct: 426 MDPKYNFPKQELVCETVANMFHRLVYAH 453
>gi|221059697|ref|XP_002260494.1| DNA repair metallo-beta-lactamase [Plasmodium knowlesi strain H]
gi|193810567|emb|CAQ41761.1| DNA repair metallo-beta-lactamase, putative [Plasmodium knowlesi
strain H]
Length = 769
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIG-SWHSI 73
+++YFLTH H+DH ++ + +F S +T KL G++ I L I ++H
Sbjct: 41 TKIYFLTHFHADHYTNINKYFHEN-VFSSTITKKLLT-NIIGVNEKYIHNLKINKNYHVF 98
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRW 123
+ EVI IDANHCPG SV++ F G +++TGDFR+
Sbjct: 99 NF-----------EVIFIDANHCPG----SVIIYFEFANGTKIIHTGDFRY 134
>gi|123367345|ref|XP_001296993.1| DNA repair metallo-beta-lactamase family protein [Trichomonas
vaginalis G3]
gi|121876902|gb|EAX84063.1| DNA repair metallo-beta-lactamase family protein [Trichomonas
vaginalis G3]
Length = 356
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 126/306 (41%), Gaps = 60/306 (19%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSP 78
FL+H HSDH G+ S L C+ +TAK+ L++P L + + I ++
Sbjct: 39 FLSHAHSDHIAGIPSFKPPRVLHCTPITAKIILLRYP----RLAKCIQIHEYN------- 87
Query: 79 SSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTL 137
S + + I+ANH PG S M LF G +L+TGDFR NTL
Sbjct: 88 SEFIIDAITIRIINANHTPG----SCMFLFETPLGRKILHTGDFR----------ADNTL 133
Query: 138 VKALKDDV-VDILYLDNTYCNSSYAFPSREVAAQQIWVWP-ERL------QTMHLLGFHD 189
++++K V+ L++D TY S F SR Q+ W ER+ T+ L+G +
Sbjct: 134 IESIKKFCPVNQLFIDCTYATSKLLFLSR----QECINWTIERVIENMKSNTLTLIGTYT 189
Query: 190 I--------FTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGG 241
+ + K S+ RY ++ ++ P+ + P+
Sbjct: 190 LGKEELVLAISNKLSIPIYAPKDRYKGIVEMIKCGYCSESCFTNDPTKTRVYLVPIMDCN 249
Query: 242 SLPGSLFSSYQ----------SKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCF 291
S+ S+++ + W G + ++ G + +Y VPYSDHS
Sbjct: 250 SVSASVWAKQNGYSSVCAIAATGWSGKAGWKNPQITYQ-GPIKV---TLYEVPYSDHSSP 305
Query: 292 TEIEEF 297
E+ F
Sbjct: 306 QELLNF 311
>gi|1326018|emb|CAA54243.1| SNM1 [Saccharomyces cerevisiae]
Length = 216
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 26 DHTQGLSSAW-------ARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSP 78
DH L +W + L+CS++TA L LKF + + I++L + I+
Sbjct: 1 DHYIRLKKSWNNPDENPIKKTLYCSKITAILVNLKF-KIPMDEIQILPMNKRFWITDT-- 57
Query: 79 SSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWEASNERA 130
+ V+ +DANHCPG ++++LF+ +L+TGDFR SN +
Sbjct: 58 -------ISVVTLDANHCPG----AIIMLFQEFLANSYDKPIRQILHTGDFR---SNAKM 103
Query: 131 EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
+ ++ +D +YLD TY Y FPS+ + + + RL
Sbjct: 104 IETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRL 152
>gi|71657612|ref|XP_817319.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882502|gb|EAN95468.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 522
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 52/176 (29%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS-------------LIR 63
VY L+H H+DH +GLS +W G + C +T L K+ G+ + +R
Sbjct: 22 VYLLSHFHTDHMKGLSHSWCAGLIICEAVTRALLIQKY-GVCMEKCSVSLPLFQRTPFLR 80
Query: 64 VLDIGSWHSISVVSPSS------------------------GEKTFVEVIAIDANHCPGI 99
++ S S V+P S GE V + + A H PG
Sbjct: 81 MVTTTS----SKVAPDSAEEREFVLDTVKDNGSDENCGSNFGEDGMVMLYLLPAFHIPG- 135
Query: 100 LGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTY 155
SVM FG +LYTGDF+++ E R L D VD +Y+D+T+
Sbjct: 136 ---SVMFFLETPFGNVLYTGDFKYD------EYARRRLDPFFADHSVDHVYVDDTW 182
>gi|302832754|ref|XP_002947941.1| hypothetical protein VOLCADRAFT_120549 [Volvox carteri f.
nagariensis]
gi|300266743|gb|EFJ50929.1| hypothetical protein VOLCADRAFT_120549 [Volvox carteri f.
nagariensis]
Length = 869
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 15/91 (16%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFLTH HSDHT GL+ ++ G ++CS +TA+L G+ +++ L +G ++V+
Sbjct: 31 YFLTHFHSDHTVGLNKSFDGGVIYCSHVTARLLVHDM-GIKPQVVKPLAVG----VAVMV 85
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLF 108
V V +DANHCPG SVM LF
Sbjct: 86 QG------VRVTPLDANHCPG----SVMFLF 106
>gi|378732158|gb|EHY58617.1| DNA cross-link repair 1C protein [Exophiala dermatitidis
NIH/UT8656]
Length = 683
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 34/171 (19%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPL--KFP---GLDLSLIRVLDIGSW 70
YFL+H+HSDH GL S + P ++CS T ++ K+P ++
Sbjct: 30 AYFLSHVHSDHLLGLESV--KMPFVYCSATTRRILLKLEKYPHRINFAKGILESRKQHYR 87
Query: 71 HSISVVSP---------SSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
H +++ P G K+ ++V +DANHCPG +VM L GD +LYTGD
Sbjct: 88 HLKTILRPLPLHVSTELELGPKSTIKVTLLDANHCPG----AVMFLIEGDGKAILYTGDI 143
Query: 122 R----WEASNERAEIGRNTLV--KALKDDVVDILYLDNTYCNSSYAFPSRE 166
R W S I +N ++ + +D +YLD T+ +S+ P RE
Sbjct: 144 RAEPWWVNS-----IVQNPVILPYTCRLKTLDCIYLDTTF--ASHDEPYRE 187
>gi|340514414|gb|EGR44677.1| predicted protein [Trichoderma reesei QM6a]
Length = 453
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS-LIRVLDIGSWHSISVVS 77
FL+H+HSDH GL + R PL+ R+ L L+ L +V+ S +V+
Sbjct: 24 FLSHVHSDHLSGLET--LRSPLYPCRVNYALGILEARQQTYKHLSKVIKPLPLESPTVIE 81
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTL 137
G+ +++V DANHCPG SVM L G +LYTGD R E A L
Sbjct: 82 LQPGK--YIQVTLFDANHCPG----SVMFLIEGQGKAILYTGDIRSEPWFVNAITRSPAL 135
Query: 138 VK-ALKDDVVDILYLDNTYCN 157
++ +D +YLD ++ +
Sbjct: 136 IEYTCGIKTLDTIYLDTSFTD 156
>gi|115390845|ref|XP_001212927.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193851|gb|EAU35551.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 694
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 79/169 (46%), Gaps = 31/169 (18%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPL--KFPGLDLSLIRVLDIGSWH---- 71
FL+H+HSDH QGL S R P ++CS T L K+P +L+ H
Sbjct: 32 FLSHVHSDHLQGLES--FRAPFIYCSAATRDLLLRIEKYPHRMNFSKGILESRQLHYKHL 89
Query: 72 -----SISVVSPSSGEKT---FVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFR- 122
I + +P+ E T + V +DANHC G +VM L GD +LYTGD R
Sbjct: 90 SKLLRPIPLNTPTVIELTPRLSIRVTLLDANHCTG----AVMFLIEGDGKAILYTGDIRA 145
Query: 123 ---WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSY---AFPSR 165
W S R I L L +D +YLD+T+ +S+ FPS+
Sbjct: 146 EPWWVNSLVRHPI---LLPYTLGSKRLDKIYLDSTFARASHIYRTFPSK 191
>gi|453086518|gb|EMF14560.1| hypothetical protein SEPMUDRAFT_63032 [Mycosphaerella populorum
SO2202]
Length = 648
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 39/166 (23%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPL--KFP-------GLDLS-------- 60
FL+H+HSDH QGL S RGP ++C+ T ++ K+P G+ S
Sbjct: 34 FLSHVHSDHLQGLESC--RGPFIWCTTATREILLRLEKYPHRMNFATGILESRQQTYKHL 91
Query: 61 --LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYT 118
L++ + + + I +V S + V +DANHC G + M L GD +LYT
Sbjct: 92 RKLLKPIPLETPTDIELVPGRS-----IRVTLLDANHCVG----ACMFLIEGDGKAILYT 142
Query: 119 GDFRWEASNERAEIGRNTLV-------KALKDDVVDILYLDNTYCN 157
GD R E A I RN ++ KAL +D +YLD T+ N
Sbjct: 143 GDIRAEPWWVNALI-RNPVMLPYACNGKALPQKQLDTIYLDTTFAN 187
>gi|342320970|gb|EGU12908.1| DNA repair protein Pso2/Snm1, putative [Rhodotorula glutinis ATCC
204091]
Length = 925
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 86/211 (40%), Gaps = 70/211 (33%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD + +G + YFL+H HSDH Q L+S+W+ G ++ S+ T L LK D L
Sbjct: 351 ITVDAFKYGKIDGCKAYFLSHAHSDHYQNLNSSWSHGEIYASQTTINLIKLKLKLKDEYL 410
Query: 62 IRVLDIGSWHSISVVSPSSGEKTF----VEVIAIDANHCPGILGCSVMLLFRGDFGC--- 114
P +KT ++V IDANHCPG SV+ LF G
Sbjct: 411 F---------------PLPMDKTVKVHGIDVTLIDANHCPG----SVLFLFEGPHTDPKS 451
Query: 115 -----------LLYTGDFRWEASN-----------------ERAEIGRNTLV-------- 138
L+ GDFR + RA +
Sbjct: 452 PFSKTPNRIFRYLHCGDFRASPQHILHPSMSYPTPATSRMMARASSSTSQPSSSQPPDPL 511
Query: 139 --KALKDDVVDILYLDNTYCNSSYAFPSREV 167
+ LK +D +YLD TY + SY FP++E+
Sbjct: 512 PGRTLK--RLDAIYLDTTYLSPSYCFPAQEL 540
>gi|121702877|ref|XP_001269703.1| hypothetical protein ACLA_030100 [Aspergillus clavatus NRRL 1]
gi|119397846|gb|EAW08277.1| hypothetical protein ACLA_030100 [Aspergillus clavatus NRRL 1]
Length = 792
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLF--PLKFPGLDLSLIRVLDIGSWH---- 71
FL+H+HSDH QGL S R P ++CS T ++ K+P +L+ H
Sbjct: 51 FLSHVHSDHLQGLES--FRAPFIYCSAATREMLLRIEKYPHRMNFSKGILESRRLHYKHL 108
Query: 72 -----SISVVSPSSGEKT---FVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
I + +P+ E T + V DANHC G +VM L GD +LYTGD R
Sbjct: 109 SRLLRPIPLNTPTEIELTPLLSIRVTLFDANHCAG----AVMFLIEGDGNAILYTGDIRA 164
Query: 124 EASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSSYAFPS 164
E + I L+ L +D +Y+D T+ +++ PS
Sbjct: 165 EPWWVNSLIRHPVLIPYTLCGKRLDKIYIDTTFARANHVCPS 206
>gi|70990712|ref|XP_750205.1| DNA repair protein [Aspergillus fumigatus Af293]
gi|66847837|gb|EAL88167.1| DNA repair protein, putative [Aspergillus fumigatus Af293]
Length = 760
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 25/166 (15%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPL--KFPGLDLSLIRVLDIGSWH---- 71
FL+H+HSDH QGL S R P ++CS T +L K+P +L+ H
Sbjct: 19 FLSHVHSDHLQGLES--FRAPFIYCSAATRELLLRIEKYPHRMNFSKGILESRRLHYKHL 76
Query: 72 -----SISVVSPSSGEKT---FVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
I + +P+ E T + V +DANHC G +VM L GD +LYTGD R
Sbjct: 77 TKLLRPIPLDTPTEIELTPLLSIRVTLLDANHCAG----AVMFLIEGDGKAVLYTGDIRA 132
Query: 124 EASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSSY---AFPSR 165
E + + L+ L +D +YLD T+ + ++ +FPS+
Sbjct: 133 ERWWVNSLVRHPVLIPYTLGSKKLDKIYLDTTFASINHVCRSFPSK 178
>gi|159130682|gb|EDP55795.1| DNA repair protein, putative [Aspergillus fumigatus A1163]
Length = 549
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 25/173 (14%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPL--KFPGLDLSLIRVLDIGSWH---- 71
FL+H+HSDH QGL S R P ++CS T +L K+P +L+ H
Sbjct: 19 FLSHVHSDHLQGLES--FRAPFIYCSAATRELLLRIEKYPHRMNFSKGILESRRLHYKHL 76
Query: 72 -----SISVVSPSSGEKT---FVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
I + +P+ E T + V +DANHC G +VM L GD +LYTGD R
Sbjct: 77 TKLLRPIPLDTPTEIELTPLLSIRVTLLDANHCAG----AVMFLIEGDGKAVLYTGDIRA 132
Query: 124 EASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSSY---AFPSREVAAQQI 172
E + + L+ L +D +YLD T+ + ++ +FPS+ +++
Sbjct: 133 ERWWVNSLVRHPVLIPYTLGSKKLDKIYLDTTFASINHVCRSFPSKAEGLREL 185
>gi|241952418|ref|XP_002418931.1| DNA cross-link repair protein, putative [Candida dubliniensis CD36]
gi|223642270|emb|CAX44239.1| DNA cross-link repair protein, putative [Candida dubliniensis CD36]
Length = 569
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 10/151 (6%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
+ VDR+ +VY LTH H DH QGL + G ++CS LT L + +S R
Sbjct: 17 VFVDRFNGTGEVYLLTHCHQDHLQGLLNNSFCGRVYCSALTKSTLELDTRYIHVS--RFF 74
Query: 66 DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125
+ ++ V G+ V + I + HCPG S M L +L TGD R E+
Sbjct: 75 KVKEYNETFAVETLLGK---VTITMIPSYHCPG----SSMFLLESSTKSVLITGDVRAES 127
Query: 126 SNERAEIGRNTLVKALKD-DVVDILYLDNTY 155
+ I L + +D LYLD T+
Sbjct: 128 WWTSSLIKNPHLFPYITGLRTLDQLYLDTTF 158
>gi|350637985|gb|EHA26341.1| hypothetical protein ASPNIDRAFT_120082 [Aspergillus niger ATCC
1015]
Length = 774
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 34/203 (16%)
Query: 4 GLISVDRWTEGSQ-----VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLF--PLKFP 55
G + VD + + + FL+H+HSDH QGL S R P ++CS T ++ K+P
Sbjct: 6 GFVRVDYFRKNPERPPPLACFLSHVHSDHLQGLES--FRTPFIYCSAATREMLLRIEKYP 63
Query: 56 GLDLSLIRVLDIGSWH---------SISVVSPSSGEKT---FVEVIAIDANHCPGILGCS 103
+L+ H I + +P+ + T + DANHC G +
Sbjct: 64 HRMNFSKGILESRKLHYKHLSKLLRPIPLNTPTELDLTPRLSIRATLFDANHCTG----A 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSS--- 159
VM L G+ +LYTGD R E + I L+ L + +D +Y+DNT+ S
Sbjct: 120 VMFLIEGNGKAILYTGDIRAEPWWVNSIIRNPVLIPYTLGNKQLDNIYIDNTFARPSHVC 179
Query: 160 YAFPSREVAAQQ----IWVWPER 178
+ FPS+ ++ I +P+R
Sbjct: 180 HTFPSKAEGLKELLNKIQAYPDR 202
>gi|448103590|ref|XP_004200073.1| Piso0_002639 [Millerozyma farinosa CBS 7064]
gi|359381495|emb|CCE81954.1| Piso0_002639 [Millerozyma farinosa CBS 7064]
Length = 714
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 14/155 (9%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDI 67
VD +T+ +++Y LTH H+DH GL G ++CS +T KL +K P + + +
Sbjct: 15 VDNFTDEAELYILTHSHTDHLLGLRKRSFDGLVYCSDITKKLIEIKRPCFASNYLIPI-- 72
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASN 127
++ V++ S+G + + I + HCPG S M L +L TGD R E
Sbjct: 73 -QYNRRYVINLSTGR---LSLTMIPSYHCPG----SSMFLLENSRHRVLITGDIRGEDW- 123
Query: 128 ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAF 162
E+ N+ ++ + L LDN Y ++++++
Sbjct: 124 WLEELKTNSFLRPY---ISGTLRLDNIYLDTTFSY 155
>gi|50554327|ref|XP_504572.1| YALI0E29931p [Yarrowia lipolytica]
gi|49650441|emb|CAG80176.1| YALI0E29931p [Yarrowia lipolytica CLIB122]
Length = 839
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 43/168 (25%)
Query: 16 QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGL-------DLSLI------ 62
+V+ L+H+H+DHT GL + G ++CS++T + K P D++ I
Sbjct: 31 EVWLLSHVHTDHTAGLENVG--GLVYCSKVTKNMLVEKDPRSKRHKAYNDMAAIPNGTLK 88
Query: 63 ----------RVLDIGSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGD 111
R LD+ + I+V G T V V +DA NHCPG +VM L +G
Sbjct: 89 SKYTPIQDRLRGLDLDTPFEINV-----GAYT-VSVTLLDASNHCPG----AVMFLLQGK 138
Query: 112 FGCLLYTGDFR----WEASNERAEIGRNTLVKALKDDVVDILYLDNTY 155
C+LYTGD R W S E + + K +D +YLD T+
Sbjct: 139 GKCVLYTGDIRAEKWWLRSLENHPLLLPYICGVKK---LDCIYLDTTF 183
>gi|448099778|ref|XP_004199220.1| Piso0_002639 [Millerozyma farinosa CBS 7064]
gi|359380642|emb|CCE82883.1| Piso0_002639 [Millerozyma farinosa CBS 7064]
Length = 714
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDI 67
VD +T+ +++Y LTH H+DH GL G ++CS +T +L +K P + +
Sbjct: 15 VDNFTDEAELYLLTHSHTDHLLGLRKRSFDGLVYCSYITKELIEIKRPCFASKNLIPIQY 74
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASN 127
+ IS+ S+G + V I + HCPG S M L +L TGD R E
Sbjct: 75 NRCYDISL---STG---CLYVTMISSYHCPG----SSMFLLEDSRHRVLITGDIRGEDW- 123
Query: 128 ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAF 162
E+ NT ++ + L LDN Y ++++++
Sbjct: 124 WLEELKSNTFLRPY---ISGALRLDNIYLDTTFSY 155
>gi|317026030|ref|XP_001388784.2| DNA repair protein [Aspergillus niger CBS 513.88]
Length = 798
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLF--PLKFPGLDLSLIRVLDIGSWH---- 71
FL+H+HSDH QGL S R P ++CS T ++ K+P +L+ H
Sbjct: 32 FLSHVHSDHLQGLES--FRTPFIYCSAATREMLLRIEKYPHRMNFSKGILESRKLHYKHL 89
Query: 72 -----SISVVSPSSGEKT---FVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
I + +P+ + T + DANHC G +VM L G+ +LYTGD R
Sbjct: 90 SKLLRPIPLNTPTELDLTPRLSIRATLFDANHCTG----AVMFLIEGNGKAILYTGDIRA 145
Query: 124 EASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSS---YAFPSREVAAQQ----IWVW 175
E + I L+ L + +D +Y+DNT+ S + FPS+ ++ I +
Sbjct: 146 EPWWVNSIIRNPVLIPYTLGNKQLDNIYIDNTFARPSHVCHTFPSKAEGLKELLNKIQAY 205
Query: 176 PER 178
P+R
Sbjct: 206 PDR 208
>gi|296422781|ref|XP_002840937.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637164|emb|CAZ85128.1| unnamed protein product [Tuber melanosporum]
Length = 747
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCS--------RLTAKLFPLKFPGLDLSLIRVLDIGSW 70
FLTH+HSDH QGL + ++CS +L +L L R L
Sbjct: 81 FLTHIHSDHLQGLEGFYGGPFIYCSAATKELLIKLERRLHRFNLAKGVLEARRCLYAEKE 140
Query: 71 HSISVV---SPSS---GEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFR-- 122
+ V+ +P+ G + V DANHCPG +VM L GD +LYTGD R
Sbjct: 141 KKLKVIPLETPTMVEIGSGKSLRVTLFDANHCPG----AVMFLIEGDGKAILYTGDIRAE 196
Query: 123 --WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSS 159
W +R + + A+ +D +YLD ++ S
Sbjct: 197 KWWVDYLKRHPV---LVPYAMGLKTLDKIYLDTSFAGRS 232
>gi|225683182|gb|EEH21466.1| DNA cross-link repair protein pso2/snm1 [Paracoccidioides
brasiliensis Pb03]
Length = 881
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 21/115 (18%)
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--------L 115
+ DI W + + + G V+V + ANHCPG S + LF + G +
Sbjct: 459 ITDI-EWDEVFEIPETGG----VQVTMLPANHCPG----SSLFLFEKEVGKGPKPKIHRI 509
Query: 116 LYTGDFRWEASNERAEIGRNTLVKAL----KDDVVDILYLDNTYCNSSYAFPSRE 166
L+ GDFR ++ R + R +V +L K +D+ YLD TY N YAFP++E
Sbjct: 510 LHCGDFRASPAHVRHPLLRPDVVDSLTGKTKQQTIDVCYLDTTYLNPKYAFPNQE 564
>gi|124810460|ref|XP_001348885.1| DNA repair metallo-beta-lactamase protein, putative [Plasmodium
falciparum 3D7]
gi|23497787|gb|AAN37324.1| DNA repair metallo-beta-lactamase protein, putative [Plasmodium
falciparum 3D7]
Length = 860
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 25/113 (22%)
Query: 16 QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
+++FLTH H+DH ++ + +FCS++T KL +++I V D H++ +
Sbjct: 42 RIFFLTHFHADHYTNINKYFNEN-VFCSQITKKLL--------VNIIEVQD-KYVHNLKI 91
Query: 76 VSPSSGEKTF----VEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRW 123
K + +V IDANHCPG SV++ F G +++TGDFR+
Sbjct: 92 ------NKIYYLFNFKVAFIDANHCPG----SVIIYFEFKNGTKIIHTGDFRY 134
>gi|294658312|ref|XP_460642.2| DEHA2F06534p [Debaryomyces hansenii CBS767]
gi|202953037|emb|CAG88974.2| DEHA2F06534p [Debaryomyces hansenii CBS767]
Length = 783
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
+ VDR+ + +Y LTH H+DH GL + ++CS T KL L P L ++
Sbjct: 23 LGVDRFNTIANLYLLTHCHTDHLCGLRNKSFDSIVYCSETTKKLVALD-PSFRHVLPFII 81
Query: 66 DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125
I + ++ +GE+ + + I A HCPG + M L G +LYTGD R E+
Sbjct: 82 PIET--NVPFTITLNGEE--ITMTLIPAYHCPG----ATMFLLEGATKNILYTGDIRAES 133
>gi|238883921|gb|EEQ47559.1| hypothetical protein CAWG_06139 [Candida albicans WO-1]
Length = 537
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
+ VD+++ ++VY LTH H DH QGL ++ G ++CS LT L +S R
Sbjct: 17 VVVDKFSGTAEVYLLTHCHQDHLQGLLNSSFCGRVYCSALTKSTLELDTRYTRVS--RFF 74
Query: 66 DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125
++ ++ V G+ V + I + HCPG S M L +L TGD R E+
Sbjct: 75 NVKEYNETFTVDTLLGK---VSITMIPSYHCPG----SAMFLLESFCKNVLITGDVRAES 127
Query: 126 SNERAEIGRNTL---VKALKDDVVDILYLDNTY 155
+ I L + LK +D +YLD T+
Sbjct: 128 WWTLSLIKNPHLFPYITGLK--TLDQIYLDTTF 158
>gi|427784859|gb|JAA57881.1| Putative protein artemis [Rhipicephalus pulchellus]
Length = 358
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 6 ISVDRW---TEGSQVYFLTHLHSDHTQGLSSA--------WARGPLFCSRLTAKLFPLKF 54
+SVDR+ S V+ L+H H DH QGL L+ S ++ +L L
Sbjct: 14 LSVDRFDGRNVHSTVFLLSHCHRDHMQGLDGCAFRRRLRSRRDVRLYVSAVSCRLL-LNE 72
Query: 55 PGLD--LSLIRVLDIGSWHSISV-VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGD 111
P S + VL + + +++V ++G + V V I ANHC G SVM L G+
Sbjct: 73 PKYSWLRSRLSVLPLDAPTTLTVPADGTAGSEYAVVVTPIPANHCAG----SVMFLLEGE 128
Query: 112 -FGCLLYTGDFRWEASNERAEIGRNTLVKALKDDV-----VDILYLDNTYCNSSYAF-PS 164
G +LYTGDFR ++G + + +L D +D Y+D T C A+ P+
Sbjct: 129 RGGTVLYTGDFRL-------DVGLASTLTSLHCDTGRVKPIDTAYVDTTLCRPDAAYVPT 181
Query: 165 RE 166
R+
Sbjct: 182 RQ 183
>gi|156100567|ref|XP_001616011.1| DNA repair metallo-beta-lactamase protein [Plasmodium vivax Sal-1]
gi|148804885|gb|EDL46284.1| DNA repair metallo-beta-lactamase protein, putative [Plasmodium
vivax]
Length = 769
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIG-SWHSI 73
+++YFLTH H+DH ++ + +F S +T KL G++ I L I ++H
Sbjct: 42 TKIYFLTHFHADHYTNINKYFHEN-VFSSTITKKLLT-NIIGVNEKYIHNLKINKNYHLF 99
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRW 123
+ E+I +DANHCPG SV++ F G +++TGDFR+
Sbjct: 100 N-----------FEIIFLDANHCPG----SVIIYFEFANGTKIIHTGDFRY 135
>gi|406859025|gb|EKD12098.1| artemis protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 957
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 31/168 (18%)
Query: 19 FLTHLHSDHTQGLSSA-WARGPLFCSRLTAKLFPLKFP------GLDLSLIRVLDIGSWH 71
FL+H+HSDH GL S W ++CS T ++ L+ G ++ + + H
Sbjct: 32 FLSHVHSDHLAGLDSKHWKTSFIYCSPATREIL-LRLERRVDRVGFEMKTLAARKVQYGH 90
Query: 72 SISVVSPSS-GEKTFVE--------VIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFR 122
++ P G T +E V DANHC G +VM LF D +LYTGD R
Sbjct: 91 LEKLLKPIPLGTPTQIELKPGVTLQVTLFDANHCAG----AVMFLFEMDNLAVLYTGDIR 146
Query: 123 ---WEASNERAEIGRNTLVKALKDDV--VDILYLDNTYCNSSYAFPSR 165
W S+ + RN L+ + +D +YLD + + S FP +
Sbjct: 147 SEPWHVSS----LARNPLLLEYTSGIKTLDCIYLDTSRTDQSI-FPPK 189
>gi|402218720|gb|EJT98796.1| hypothetical protein DACRYDRAFT_35001, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 216
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 24/180 (13%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL-----IRVLDIGSWH 71
+Y L+H H DH +GL ++ G + CS AK L+ + +R I W
Sbjct: 3 LYLLSHTHVDHIRGLDASTFCGKVICSP-DAKEMILRMETAKDRVDYDRGVREQKIRRWA 61
Query: 72 ----SISVVSPSSGEKTFVEVIAI---DANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
++S+ SP+ E E + I DANHCPG SVM L G G +L+TGD R E
Sbjct: 62 RLKTAVSLNSPTKFEILADETVLITLLDANHCPG----SVMFLVEGSRGAVLHTGDVRSE 117
Query: 125 ASNERAEIGRNTLVKALKD--DVVDILYLDNTYCNSSYAFPSREVAA----QQIWVWPER 178
A + RN L+ V+D ++LD + + P +E A + I ++P +
Sbjct: 118 PVMVNA-LRRNPLLTQYISPFKVLDAIHLDTSCFLGTVDVPPKEDAVAGFIKLIMLYPPK 176
>gi|242211498|ref|XP_002471587.1| predicted protein [Postia placenta Mad-698-R]
gi|220729359|gb|EED83235.1| predicted protein [Postia placenta Mad-698-R]
Length = 959
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 37/142 (26%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF---------PLK-----------F 54
S ++ LTH H+DH GLS+ G + CSR ++ LK F
Sbjct: 31 SALHLLTHTHTDHLYGLSARSFSGQVICSRDAKEMLLRHEVYGERALKDQDIRAEKTRTF 90
Query: 55 PGLDLSLIRVLDIGSW---------HSISVVSPSSGE---KTFVEVIAIDANHCPGILGC 102
L + RV+ G+ ++ + +P++ E K V++ DANHCPG
Sbjct: 91 AHLKVE-PRVMQDGTLLFEGARDLIRTLPLYTPTTIELDDKKRVKLTLFDANHCPG---- 145
Query: 103 SVMLLFRGDFGCLLYTGDFRWE 124
+VM L GD G +L+TGDFR E
Sbjct: 146 AVMFLIEGDDGAVLHTGDFRAE 167
>gi|159473960|ref|XP_001695097.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276031|gb|EDP01805.1| predicted protein [Chlamydomonas reinhardtii]
Length = 550
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 124/310 (40%), Gaps = 74/310 (23%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFP--LKFPGLDLSLIRVLDIGSWHSISVV 76
LTH H+DH +GL+ +++ G + S +TA+L L+ P L R L + + ++ V
Sbjct: 285 ILTHFHADHYKGLTKSFSGGVVLASPVTARLVAERLRLPAARL---RTLPMDTPVTVDGV 341
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNT 136
+ + +DANHCPG + M + + + + + ++
Sbjct: 342 T----------LTLVDANHCPG----AAMFIAEVLPPPPPTQQMQQQQQAGAAGHVKQHP 387
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSRE------VAAQQIWVWPERLQTMHLLGFH-- 188
++AL L LD TY + +Y FP ++ + A + + +R+ +G
Sbjct: 388 ALQALVGRRC-TLVLDTTYADPAYVFPPQQDVLDAVLTAVRAEAFNKRVGDRAGVGAEAR 446
Query: 189 -------DIFTTK---TSLTRVRAVPRYSFSIDTLESLNTMH--PTIGIMPSGLPWVVKP 236
++ +K +L+ PRYS I T +H P + GL
Sbjct: 447 DAGCRLCAVYCSKEKAATLSACGLAPRYSSLITTNHLEANIHAVPLFKVTLDGL------ 500
Query: 237 LKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEE 296
++ S Y+ ++ A G +SVPYS+HS F+E+
Sbjct: 501 --------AAILSQYRGRYSAVIG--------------------FSVPYSEHSSFSELRS 532
Query: 297 FLNLVQPSNI 306
F+ +QP I
Sbjct: 533 FVRWLQPGRI 542
>gi|399218889|emb|CCF75776.1| unnamed protein product [Babesia microti strain RI]
Length = 452
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 140/375 (37%), Gaps = 111/375 (29%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
YFLTH HSDH G+ W+ ++ S +T L K G++ I L + + + +
Sbjct: 43 YFLTHFHSDHYGGIGKTWS-NTIYTSHITGTLVE-KVLGVNPKYICKLQLNRVYKLCNFT 100
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRW------------- 123
S + ANHCPG SVM++F G +L+TGDFR+
Sbjct: 101 FS----------FVGANHCPG----SVMIIFEFVSGKRILHTGDFRYHNTILKSLNIQAP 146
Query: 124 -------------------EASNERAEI----GRNTLVKALKDDVVDILYLDNTYCNSSY 160
+ SN E+ TL+ A + + DI+ +D T+
Sbjct: 147 DTTCDLSDVDLLFLTDYESDDSNHDTELKLVDKTATLIDA--NVIFDIVLMDTTFSLIKG 204
Query: 161 AFPSREVAAQQI----------------------WVWPERL--QTMHLLGFHDIFTTKTS 196
FP+++V Q+ + ERL H +F +
Sbjct: 205 VFPTQDVVIAQVIEDVSNHLKECSGKCLFLFGSYLLGKERLYFSVAHKFAMPIVFANQKQ 264
Query: 197 LTRVRAVP---RYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSY-- 251
+ ++P +Y I +N T G+ +G+ +V L G+++ +
Sbjct: 265 HKIITSLPLKSKYFSLISNTHDINGNDITNGV--TGIIHIVSL-----HLLGTVYPRFIP 317
Query: 252 QSKWRATGGTQTEKLKEALGSVDR------------FHK--------YIYSVPYSDHSCF 291
KW T+ + DR FH Y SV YS+HS
Sbjct: 318 NMKWIENYLTEVNNNTASCAEFDRVVAYLPTGWAHKFHMKSNQYKNVYATSVSYSEHSSA 377
Query: 292 TEIEEFLNLVQPSNI 306
+EIE+F+++++P I
Sbjct: 378 SEIEQFVSVLKPRQI 392
>gi|242802706|ref|XP_002484025.1| DNA repair protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218717370|gb|EED16791.1| DNA repair protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 635
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 25/181 (13%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPL--KFPGLDLSLIRVLDIGSWH-- 71
V FL+H+HSDH QGL S R P ++CS ++ +L K+P +L+ H
Sbjct: 24 VCFLSHVHSDHLQGLES--LRSPFIYCSAVSRELLLRLEKYPHRMNFSKGILEARKQHYG 81
Query: 72 -------SISVVSPSSGEKT---FVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
I + +P+ E T + V +DANHC G +VM L G +LYTGD
Sbjct: 82 HLAKILRPIPLNTPTEIELTPLQRIRVTLLDANHCAG----AVMFLIEGQGKAILYTGDI 137
Query: 122 RWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYC---NSSYAFPSREVAAQQIWVWPE 177
R E+ + LV A +D +YLD T+ N FPS+ +++ +
Sbjct: 138 RAESWWVNSLTRHPALVPYACGLKTLDNIYLDTTFAVKSNIYRYFPSKAEGVKELLEQVQ 197
Query: 178 R 178
R
Sbjct: 198 R 198
>gi|389585475|dbj|GAB68206.1| DNA repair metallo-beta-lactamase protein [Plasmodium cynomolgi
strain B]
Length = 572
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 19/108 (17%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIG-SWHSISVV 76
YFLTH H+DH ++ + +F S +T KL G++ I L I ++H +
Sbjct: 45 YFLTHFHADHYSNINKYFHEN-VFSSTITKKLLT-NIIGVNEKYIHNLKINKNYHLFNF- 101
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRW 123
E+I IDANHCPG SV++ F G +++TGDFR+
Sbjct: 102 ----------EIIFIDANHCPG----SVIIYFEFANGTKIIHTGDFRY 135
>gi|344228979|gb|EGV60865.1| hypothetical protein CANTEDRAFT_110826 [Candida tenuis ATCC 10573]
Length = 435
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
I+VD++ ++++ L+H HSDH GL++ + ++CS LT ++F L + +R L
Sbjct: 16 IAVDKFNVDAKIFLLSHCHSDHLVGLANKSFQSTVYCSELTKQIFSLD--NRNAPWLRYL 73
Query: 66 DIGSWHSISVVSPSS---GEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFR 122
I+ SP S +K V + I A HCPG S M L + +L+TGD R
Sbjct: 74 -----RGIAFNSPFSIILNDKKVV-LTLISAYHCPG----SAMFLVESEEKNVLFTGDIR 123
Query: 123 ---WEASNERAEIGRNTLVKALKDDVVDILYLDNTY 155
W + + K +D +YLD T+
Sbjct: 124 AETWWTMGLKKNMYLFPYTCGFKS--LDCIYLDTTF 157
>gi|346970779|gb|EGY14231.1| artemis protein [Verticillium dahliae VdLs.17]
Length = 657
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 25/157 (15%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKL------FPLKF---PGLDLSLIRVLD-- 66
FL+H+HSDH GL S R P ++CS T ++ +P + G+ + ++
Sbjct: 32 FLSHVHSDHLAGLES--LRSPFVYCSAATREILLRLERYPCRINFAKGILEARVQTFKGL 89
Query: 67 IGSWHSISVVSPSSGEKT---FVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
G I + +P+ E ++V IDANHCPG +VM L GD +LYTGD R
Sbjct: 90 KGLLKPIPLDTPTEIELAPGHCIQVTLIDANHCPG----AVMFLIEGDGRAILYTGDIRS 145
Query: 124 EASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSY 160
E + + + RN AL + I LD Y ++S+
Sbjct: 146 EPWHVNS-VARN---PALIEYTHGIKTLDKIYLDTSF 178
>gi|426364044|ref|XP_004049132.1| PREDICTED: protein artemis [Gorilla gorilla gorilla]
Length = 682
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 42/184 (22%)
Query: 2 EKGLISVDRWTEG---SQVYFLTHLHSDHTQGLSSAWARGP-------------LFCSRL 45
E IS+DR+ ++ YFL+H H DH +GL R P L+CS +
Sbjct: 10 EYPTISIDRFDRENLRARAYFLSHCHKDHMKGL-----RAPTLKRRLECSLKVYLYCSPV 64
Query: 46 TAKLFPLKFPGLDLSLIRV--LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCS 103
T +L L P R+ ++I + IS+V +SGEK + V + A HCPG S
Sbjct: 65 TKELL-LTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG----S 119
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSS-YAF 162
VM + A E A + V +KD + +YLD T+C+ Y
Sbjct: 120 VM-----------NSRPXXXXAQREAARMEFLHSVGRVKD--IQSVYLDTTFCDPRFYQI 166
Query: 163 PSRE 166
PSRE
Sbjct: 167 PSRE 170
>gi|125601931|gb|EAZ41256.1| hypothetical protein OsJ_25764 [Oryza sativa Japonica Group]
Length = 619
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 108/280 (38%), Gaps = 59/280 (21%)
Query: 88 VIAIDANHCPGILGCSVMLLFRG-DFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVV 146
V A DANHCPG +VM LF G FG +L+TGD R L +
Sbjct: 46 VTAFDANHCPG----AVMFLFEGASFGRVLHTGDCR--------------LTPDFRFLAA 87
Query: 147 DILYLDNTYCNSSYAFPSREVAAQQ----IWVWPERLQTMHLLGFHDIFTTKTSLTRVRA 202
D ++LD T+ S FPS++ + +Q IW P ++L+ D+ + L V
Sbjct: 88 DYVFLDCTFAACSLHFPSKDDSIRQVINCIWKHP-NAPVVYLVS--DMLGQEEILMEVSK 144
Query: 203 VPRYSFSIDTLESLNTMHPTIGIMPS-------------GLPWVVK------PLKGGGSL 243
V +D ++ H + P G P + + L
Sbjct: 145 VFGSKIYVDRDKNSECYHTLSLVAPEILTDDSSSRFQVIGFPRLSERATEMLALARAKHQ 204
Query: 244 PGSLFSSYQSKWRA-----TGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFL 298
P L S+W A G T K K AL R ++ V +S HS E+E+ L
Sbjct: 205 PEPLIIRASSQWYAYYEPPEGST---KRKPALTEPMRDEFGVWHVCFSMHSSREELEQAL 261
Query: 299 NLVQPSNIRGIVSSSSCYVDPLYYFGRLCRA----NQPPL 334
+QP + I ++ C L Y + C A N PL
Sbjct: 262 RFIQPKWV--ISTTPPCMAIELSYVKKHCFASRLRNDDPL 299
>gi|150865646|ref|XP_001384956.2| hypothetical protein PICST_17702 [Scheffersomyces stipitis CBS
6054]
gi|149386902|gb|ABN66927.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 411
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
I +D++ Q+Y LTH H+DHT GL++ ++CS++T L D +R L
Sbjct: 17 IGIDKFGSECQIYLLTHHHADHTVGLANKSFCRRVYCSQMTKDLISQSQQFED--SLRYL 74
Query: 66 DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125
++ V++ S E V + I + HCPG S M L +L+TGD R E
Sbjct: 75 VPKQYNEPFVLTVSDEE---VTITLIPSYHCPG----STMFLIENRRASVLFTGDIRAET 127
Query: 126 SNERAEIGRNTLVKA-------LKDDVVDILYLDNTY 155
N+L K+ + V+D LY+D T+
Sbjct: 128 ------WWVNSLAKSPFLFPYTIGAKVLDQLYIDTTF 158
>gi|302403927|ref|XP_002999802.1| artemis protein [Verticillium albo-atrum VaMs.102]
gi|261361558|gb|EEY23986.1| artemis protein [Verticillium albo-atrum VaMs.102]
Length = 657
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKL------FPLKF---PGLDLSLIRVLD-- 66
FL+H+HSDH GL S R P ++CS T ++ +P + G+ + ++
Sbjct: 32 FLSHVHSDHLAGLES--LRSPFVYCSAATREILLRLERYPCRINFAKGILEARVQTFKGL 89
Query: 67 IGSWHSISVVSPSSGEKT---FVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
G I + +P+ E ++V IDANHCPG +VM L GD +LYTGD R
Sbjct: 90 KGLLKPIPLDTPTEIELAPGLCIQVTLIDANHCPG----AVMFLIEGDGRAVLYTGDIRS 145
Query: 124 EASNERAEIGRNTLVKALK-DDVVDILYLDNTYCNSSY 160
E + + L++ +D +YLD ++ + +
Sbjct: 146 EPWHVNSVARNPALIEYTHGSKTLDKIYLDTSFIDDVH 183
>gi|149239765|ref|XP_001525758.1| hypothetical protein LELG_02316 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449881|gb|EDK44137.1| hypothetical protein LELG_02316 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 645
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
+ VD++ +++FLTH H DH QGL + ++CS+LT + L P + ++ L
Sbjct: 17 VYVDKFNSRGKLFFLTHSHEDHLQGLLNQSFCKRVYCSKLTRDIIKLD-PKYK-NKVKYL 74
Query: 66 DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR-GDFGCLLYTGDFRWE 124
+++ +S ++ V V I+ HCPG S M LF G+ CL+ TGD R E
Sbjct: 75 VAKEFNNPFQLSTNAFT---VTVTMIETYHCPG----SAMFLFETGNSACLV-TGDIRAE 126
Query: 125 ASNERAEIGRNTLVKALKD-DVVDILYLDNTY 155
+ + L +K +D +YLD T+
Sbjct: 127 EWWTSSLVKNRYLFPYIKGFKSLDTIYLDTTF 158
>gi|308476884|ref|XP_003100657.1| hypothetical protein CRE_20424 [Caenorhabditis remanei]
gi|308264675|gb|EFP08628.1| hypothetical protein CRE_20424 [Caenorhabditis remanei]
Length = 620
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 21/145 (14%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+FLTH+H ++ + L R +FCS T+ + P + G+D + + S + +
Sbjct: 227 HFLTHIHPEYLRDLDLTADRT-VFCSETTSDILP-EIMGIDS---KNVPANSIFPMRLNH 281
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF------GCLLYTGDFRWEASN-ERA 130
P S E+ + ID+NHCPG SVM+LF G+ G +L TGDFR + +
Sbjct: 282 PYSFEE--FQATMIDSNHCPG----SVMILFEGELIQKHAGGPVLCTGDFRADKTFLSEL 335
Query: 131 EIGRNTLVKALKDDVVDILYLDNTY 155
+ G + LK + +Y+DNTY
Sbjct: 336 KSGPCRFLSELK---LARIYMDNTY 357
>gi|317144266|ref|XP_001820004.2| DNA repair protein [Aspergillus oryzae RIB40]
Length = 808
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 27/167 (16%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLF--PLKFPGLDLSLIR-VLDIGSWH--- 71
FL+H+HSDH QGL S R P ++CS T +L K+P ++ R +L+ H
Sbjct: 32 FLSHVHSDHLQGLES--FRAPFIYCSAATKELLLHIEKYPHR-MNFSRGILESRRLHYKH 88
Query: 72 ------SISVVSPSSGE---KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFR 122
I + +P+ E + + V +DANHC G +VM L G +LYTGD R
Sbjct: 89 LSKLLRPIPLNTPTEIELNPRLSIRVTLLDANHCTG----AVMFLIEGSGKSILYTGDIR 144
Query: 123 WEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSS---YAFPSR 165
E+ + I L+ L +D +YLD+T+ S FPS+
Sbjct: 145 AESWWVDSLIRHPVLIPYTLGGRRLDKIYLDSTFARHSSIYRTFPSK 191
>gi|255725608|ref|XP_002547733.1| hypothetical protein CTRG_02040 [Candida tropicalis MYA-3404]
gi|240135624|gb|EER35178.1| hypothetical protein CTRG_02040 [Candida tropicalis MYA-3404]
Length = 575
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
+ +DR+T +V+ LTH H DH QGL + ++CS LT + L+ +++ L
Sbjct: 17 VHLDRFTSNGEVFLLTHSHQDHLQGLLNKSFCNRVYCSLLTKCIIALE--DKYSTVLPYL 74
Query: 66 DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFR--- 122
++ + S + T V I + HCPG SVM L G +L TGD R
Sbjct: 75 VAKEYNEPFEIETSQCKLT---VTLIPSYHCPG----SVMFLLEGIDKAVLATGDIRAES 127
Query: 123 WEASNERAEIGRNTLVKALKDDVVDILYLDNTY 155
W AS + LK V+D +Y+D T+
Sbjct: 128 WWASTLIKNTYLFPYITGLK--VLDQIYIDTTF 158
>gi|354548244|emb|CCE44981.1| hypothetical protein CPAR2_407840 [Candida parapsilosis]
Length = 562
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
+ VD ++ +V+FLTH HSDH GL G +FCS+LT + L D ++R L
Sbjct: 17 VCVDNFSYKGEVFFLTHCHSDHLNGLLENSFCGRVFCSQLTKDIIALDHRYND--ILRFL 74
Query: 66 DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWE 124
+ ++ V T V + HCPG S M LF G L TGD R E
Sbjct: 75 IVKEYNEPFEVQTFCSSMT---VTMLKTYHCPG----SSMFLFECTNGVSCLATGDIRAE 127
Query: 125 ASNERAEIGRNTL---VKALKDDVVDILYLDNTY 155
+ I + + LK +D +YLD T+
Sbjct: 128 KWWVSSLIQNRYIFPYITGLK--TLDQIYLDTTF 159
>gi|300708505|ref|XP_002996430.1| hypothetical protein NCER_100477 [Nosema ceranae BRL01]
gi|239605732|gb|EEQ82759.1| hypothetical protein NCER_100477 [Nosema ceranae BRL01]
Length = 443
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 37/159 (23%)
Query: 18 YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIR----VLDIGSWHSI 73
YFL+H HSDH GL +++ P++CS TA L LK+ + L L+ G+ S+
Sbjct: 52 YFLSHFHSDHYYGLKKSFSY-PIYCSITTANLIELKYKCKTMPLENNKNYCLEDGNIVSL 110
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIG 133
IDA+HCPG +V +F + +L+TGDFR
Sbjct: 111 -----------------IDAHHCPG----AVCFIFYVNGAFVLHTGDFR---------CT 140
Query: 134 RNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+ ++ +K I +LDNT+ FPS+E ++
Sbjct: 141 YDFTLQLMKYKFTTI-FLDNTF-EGKKPFPSQEDVIHRV 177
>gi|260941384|ref|XP_002614858.1| hypothetical protein CLUG_04873 [Clavispora lusitaniae ATCC 42720]
gi|238851281|gb|EEQ40745.1| hypothetical protein CLUG_04873 [Clavispora lusitaniae ATCC 42720]
Length = 793
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 2 EKGLISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
E I VDR+ ++ + LTH H DH GL + G ++CS T +L G L
Sbjct: 96 EFPFIGVDRFNTAARTFLLTHCHQDHLVGLLNCSFSGTVYCSPET-RLLLEDLQGYASVL 154
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIA--IDANHCPGILGCSVMLLFRGDF-GCLLYT 118
R+ + I V P ++ + +++ I A HC G S M L G++ G +L T
Sbjct: 155 PRIKTVAYNTPIEVDLPPEIQRVYGKIVITLIHAYHCLG----SCMFLIEGEYGGSVLCT 210
Query: 119 GDFR---WEASNERAEIGRNTLVKALKDDVVDILYLDNTY 155
GD R W + + LK +D +YLD T+
Sbjct: 211 GDLRAEKWWVDSLGQSPCLGPYLAGLK--TLDNIYLDTTF 248
>gi|449529313|ref|XP_004171644.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
Length = 109
Score = 55.8 bits (133), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 1 MEKGL-ISVDRWTEGSQV---YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
M +GL SVD W+ S+ +FLTH H DHT G+ ++ P++ + LT + +FP
Sbjct: 5 MPQGLPFSVDTWSPSSKKKRHHFLTHAHRDHTTGIVPHFSF-PIYSTFLTKSIVLQQFPQ 63
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGIL 100
L SL +++G S+ V P V DA+HCPGI
Sbjct: 64 LHDSLFVCIEVG--QSLVVKDPDGA----FTVTVFDAHHCPGIF 101
>gi|402467813|gb|EJW03056.1| hypothetical protein EDEG_02562, partial [Edhazardia aedis USNM
41457]
Length = 256
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 19/108 (17%)
Query: 18 YFLTHLHSDHTQGLS-SAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
+FL+H H DH GL+ + A ++CS TA L ++ L +++ +L++ W +
Sbjct: 38 HFLSHFHGDHYNGLTKKSSANKKIYCSETTANLVMMRLRVLKENIV-ILNMYKWEKL--- 93
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLF--RGDFGCLLYTGDFR 122
EK + V IDANHCPG +V +F +G F L+ GDFR
Sbjct: 94 -----EKD-IFVYLIDANHCPG----AVCFIFSVKGVF--YLHCGDFR 129
>gi|68477703|ref|XP_717164.1| hypothetical protein CaO19.5362 [Candida albicans SC5314]
gi|68477866|ref|XP_717085.1| hypothetical protein CaO19.12822 [Candida albicans SC5314]
gi|46438783|gb|EAK98109.1| hypothetical protein CaO19.12822 [Candida albicans SC5314]
gi|46438865|gb|EAK98190.1| hypothetical protein CaO19.5362 [Candida albicans SC5314]
Length = 537
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
+ VD+++ ++VY LTH H DH QGL ++ G ++CS LT L +S R
Sbjct: 17 VVVDKFSGTAEVYLLTHCHQDHLQGLLNSSFCGRVYCSALTKSTLELDTRYTRVS--RFF 74
Query: 66 DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125
++ V G+ V + I + HCPG S M L +L TGD R E+
Sbjct: 75 KAKEYNETFTVDILLGK---VSITMIPSYHCPG----SAMFLLESFCKNVLITGDVRAES 127
Query: 126 SNERAEIGRNTL---VKALKDDVVDILYLDNTY 155
+ I L + LK +D +YLD T+
Sbjct: 128 WWTLSLIKNPHLFPYITGLK--TLDQIYLDTTF 158
>gi|402469785|gb|EJW04420.1| hypothetical protein EDEG_04229, partial [Edhazardia aedis USNM
41457]
Length = 259
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 19/108 (17%)
Query: 18 YFLTHLHSDHTQGLS-SAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
+FL+H H DH GL+ + A ++CS TA L ++ L +++ +L++ W +
Sbjct: 41 HFLSHFHGDHYNGLTKKSSANKKIYCSETTANLVIMRLRVLKENIV-ILNMYKWEKL--- 96
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLF--RGDFGCLLYTGDFR 122
EK + V IDANHCPG +V +F +G F L+ GDFR
Sbjct: 97 -----EKD-IFVYLIDANHCPG----AVCFIFSVKGVF--YLHCGDFR 132
>gi|170101134|ref|XP_001881784.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643139|gb|EDR07392.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 976
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 45/144 (31%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF-------------------------- 50
++ LTH HSDH GLS+ ++CS+ ++
Sbjct: 36 LHLLTHTHSDHINGLSAKSFGHTVYCSQDAKEMLLRHEVFAERELHELELRAEKVRTYSH 95
Query: 51 ----PLKFPGLDL------SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGIL 100
PL FP + L++ L + + + + SG++ V + +DANHCPG
Sbjct: 96 LKVDPLLFPDGTMYYTGSRDLLKTLPLHTPTKMDI----SGDEA-VTITLLDANHCPG-- 148
Query: 101 GCSVMLLFRGDFGCLLYTGDFRWE 124
+VM L G G +L+TGDFR E
Sbjct: 149 --AVMFLIEGQRGAILHTGDFRAE 170
>gi|157876139|ref|XP_001686430.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68129504|emb|CAJ08047.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 664
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 63/139 (45%), Gaps = 49/139 (35%)
Query: 80 SGEKTFVEVIAIDANHCPGILGCSVMLLFRGD-FGCLLYTGDFRWEASNE------RAEI 132
+G+ FV V I ANHCPG +VM LF FG +L+TGDFR+ S E R+
Sbjct: 48 AGDGMFV-VRLIPANHCPG----AVMFLFVSPVFGTVLHTGDFRFNGSRETWEQFVRSSN 102
Query: 133 GRNTLV--------------------------------KALKD----DVVDILYLDNTYC 156
R T V +AL+D ++D+L LDNT+C
Sbjct: 103 RRQTYVPPSPCLIKREEEQHASTAAPPAPVYEQFIADDEALRDVAQRQLLDVLLLDNTFC 162
Query: 157 NSSYAFPSR-EVAAQQIWV 174
+Y FPS+ EV + I V
Sbjct: 163 APAYRFPSQWEVTQRVIEV 181
>gi|70924607|ref|XP_735125.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56508505|emb|CAH79157.1| hypothetical protein PC000135.03.0 [Plasmodium chabaudi chabaudi]
Length = 120
Score = 55.1 bits (131), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 17/112 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
E ++VYFLTH H+DH ++ + +F S +T KL LI ++ + +
Sbjct: 12 EITKVYFLTHFHADHYMNINKHFNEN-IFSSTITKKL-----------LINIIGVNEKYV 59
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRW 123
S+ + E+I IDANHCPG SV++ F G +++TGDFR+
Sbjct: 60 HSLKVNKNYYLFNFEIILIDANHCPG----SVIIYFEFSNGTKIIHTGDFRY 107
>gi|389641683|ref|XP_003718474.1| hypothetical protein MGG_00571 [Magnaporthe oryzae 70-15]
gi|351641027|gb|EHA48890.1| hypothetical protein MGG_00571 [Magnaporthe oryzae 70-15]
Length = 725
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 25/171 (14%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKL------FPLKF---PGLDLSLIRVLD-- 66
FL+H+HSDH GL S R P ++CS T +L +P + G+ + ++
Sbjct: 31 FLSHVHSDHLAGLESL--RSPFVYCSAATRELLLRLERYPCRINYAKGILEARVQTYKHL 88
Query: 67 IGSWHSISVVSPSSGE---KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
I + +P+ E + V +DANHC G +VM LF GD +LYTGD R
Sbjct: 89 KNLLKPIPLDTPTQIELAPGKSIGVTLLDANHCTG----AVMFLFEGDGKAVLYTGDIRS 144
Query: 124 EASNERAEIGRNTLVKALKDDVVDI--LYLDNTYCNSSYAFPSREVAAQQI 172
E + + I RN + + + +YLD T AFPS++ +++
Sbjct: 145 EPWHVNS-IARNPCMMEYSAGIKTLSRIYLD-TSNTEDIAFPSKDAGLKEL 193
>gi|328849752|gb|EGF98926.1| hypothetical protein MELLADRAFT_40551 [Melampsora larici-populina
98AG31]
Length = 143
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 60/141 (42%), Gaps = 30/141 (21%)
Query: 1 MEKGLISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG 56
ME I+VD + G YFL+H H+DH LS W G ++CS+ TA L G
Sbjct: 1 MEGTTIAVDAFKYGKIPNITAYFLSHAHADHYTRLSHTWDHGFVYCSQTTANLICHNL-G 59
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVE---VIAIDANHCPGILGCSVMLLFRGDFG 113
+ ++ L E T V+ V +DANHCPG S + LF G
Sbjct: 60 VKKQWVKPL-------------KDNEPTMVDGVKVTVLDANHCPG----SSLFLFEGVKS 102
Query: 114 C-----LLYTGDFRWEASNER 129
L+ GDFR + R
Sbjct: 103 QGKPFRYLHCGDFRASPAQLR 123
>gi|345565478|gb|EGX48427.1| hypothetical protein AOL_s00080g56 [Arthrobotrys oligospora ATCC
24927]
Length = 774
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 31/168 (18%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPLKFP------GLDLSLIRVL 65
E S FL+H+HSDH GL+ R P ++CS T +L LK L+
Sbjct: 27 EPSLANFLSHIHSDHLTGLAGKSYRAPFIYCSAATKQLL-LKLERRLHRFNYAKKLVESH 85
Query: 66 DIGSWH---------SISVVSPSSGE---KTFVEVIAIDANHCPGILGCSVMLLFRGDFG 113
+ H + + +P+ E + V DANHCPG S M L G
Sbjct: 86 EYSYLHYANRDRILRELPLETPTDIELCPGYTIRVTLFDANHCPG----STMFLVEGRGK 141
Query: 114 CLLYTGDFRWEASNERAEIGRNTLV----KALKDDVVDILYLDNTYCN 157
+LYTGD R E ++ RN ++ + +K +D LYLD T+ +
Sbjct: 142 AILYTGDIRAEPW-WLEKLKRNPILLPYFRGIK--TLDCLYLDTTHAS 186
>gi|409042569|gb|EKM52053.1| hypothetical protein PHACADRAFT_54509, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 589
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 37/140 (26%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH----- 71
++ L+H H+DH QGLS+ ++CS+ AK L+ L +R D+ + +
Sbjct: 33 LHLLSHTHTDHIQGLSARSFGHTVYCSQ-DAKEMLLRHEVLAERQLREKDVRAENIRTFK 91
Query: 72 ------------------------SISVVSPSSGE---KTFVEVIAIDANHCPGILGCSV 104
+ + +P+ E V + IDANHCPG +V
Sbjct: 92 HLKIKPLTHDDGMVFYNGSRDLLKPLPLNTPTRCELSNGNHVTITLIDANHCPG----AV 147
Query: 105 MLLFRGDFGCLLYTGDFRWE 124
M L +G G +LYTGDFR E
Sbjct: 148 MFLIQGSLGSILYTGDFRAE 167
>gi|46121907|ref|XP_385507.1| hypothetical protein FG05331.1 [Gibberella zeae PH-1]
Length = 600
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 69/147 (46%), Gaps = 30/147 (20%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFC---SRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
FL+H+HSDH GL S R PL L A+ K L +VL S+ +
Sbjct: 24 FLSHVHSDHLAGLES--LRSPLINYGKGVLEARQQTFK------HLSKVL-----RSLPL 70
Query: 76 VSPSSGEKT---FVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
+P+S E ++V DANHCPG +VM L GD +LYTGD R E A I
Sbjct: 71 ETPTSIELCPGREIQVTLFDANHCPG----AVMFLVEGDGKAILYTGDIRSEPWFVNA-I 125
Query: 133 GRN----TLVKALKDDVVDILYLDNTY 155
RN LK +D +YLD ++
Sbjct: 126 ERNPNLIEYTSGLK--TLDKIYLDTSF 150
>gi|407404517|gb|EKF29935.1| hypothetical protein MOQ_006262 [Trypanosoma cruzi marinkellei]
Length = 526
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 44/172 (25%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFP------GLDLSLIR---VLDI 67
VY L+H H+DH +GLS +W G + C +T L K+ + L L + +L +
Sbjct: 22 VYLLSHFHTDHMKGLSHSWCAGLIICEAVTRALLIQKYGVCMEKCSVSLPLFQRTPLLRM 81
Query: 68 GSWHSISVVSPSS------------------------GEKTFVEVIAIDANHCPGILGCS 103
+ S S +P E+ V + + A H PG S
Sbjct: 82 ATTTS-SKAAPDGVEERDVVLDTVKDNCSDDNRGGNFSEEGMVMLYLLPAFHIPG----S 136
Query: 104 VMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTY 155
VM G +LYTGDF+++ E R L D VD +Y+D+T+
Sbjct: 137 VMFFLETPCGNVLYTGDFKYD------EYARRRLDPFFADHTVDHVYVDDTW 182
>gi|238879282|gb|EEQ42920.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 822
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 54/202 (26%)
Query: 18 YFLTHLHSDHTQGLSSAWA-------------------------RGPLFCSRLTAKLFPL 52
YFLTH H+DH G+S WA + ++C+ +T +L L
Sbjct: 274 YFLTHFHADHYGGISKKWAYERVFGNDEDAFNNQTFDFDDDSIYKKIIYCTGITGRLLTL 333
Query: 53 KFPGLDLSLIRVLDIGSWHSISVVS----------------PSSGEKTFVEVIAIDANHC 96
++ +D I+ L++ + + I + S+ + V I ANHC
Sbjct: 334 RY-SIDPRFIKHLELDTRYKIKSYTEKEDDEEEEEEEEEEMESNDMTPGLYVTPITANHC 392
Query: 97 PGILGCSVMLLFR-----GDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDV---VDI 148
PG + + LF +L+ GDFR I R + K+++ +D
Sbjct: 393 PG----AAIFLFESIGIDNKIYRILHCGDFRVNMEILNHPILRPFSLTHSKNNLLQSIDK 448
Query: 149 LYLDNTYCNSSYAFPSREVAAQ 170
+YLD TY + + P +E+ +
Sbjct: 449 VYLDTTYMSPKHNLPKQELVCE 470
>gi|330935743|ref|XP_003305110.1| hypothetical protein PTT_17857 [Pyrenophora teres f. teres 0-1]
gi|311318056|gb|EFQ86823.1| hypothetical protein PTT_17857 [Pyrenophora teres f. teres 0-1]
Length = 2332
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 30/169 (17%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKL--------FPLKFPG---------LDLS 60
FL+H+HSDH GL S R P ++CS T ++ + + F D S
Sbjct: 1687 FLSHVHSDHLAGLQSL--RSPFVYCSAATKEILLRLEKFYYRMNFAKGILESRNVTYDRS 1744
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
+ ++ + + + + G + V IDANHC G +VM L GD +LYTGD
Sbjct: 1745 MRKLAKALPLDTPTEIELAPGNN--IRVTLIDANHCVG----AVMFLIEGDGKAVLYTGD 1798
Query: 121 FRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSSY---AFPSR 165
R E + + L+ L + +D +YLD T+ FPS+
Sbjct: 1799 IRAETWWVNSLVQNPVLLPYTLGNLRLDCMYLDTTFATKKMPYREFPSK 1847
>gi|76154133|gb|AAX25636.2| SJCHGC03696 protein [Schistosoma japonicum]
Length = 166
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 21/108 (19%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
I+VD + G YFL+H HSDH +G+ + +G ++CS +T L + GL L +
Sbjct: 69 ITVDAFCYNDIPGCTYYFLSHFHSDHFKGIHKNF-KGHIYCSEVTKNLLRDAY-GLGL-V 125
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR 109
I VL++ I G+ VEV A+DANHCPG S+M +F
Sbjct: 126 ISVLELEKRTLI-------GD---VEVTALDANHCPG----SLMFIFH 159
>gi|396480802|ref|XP_003841086.1| hypothetical protein LEMA_P090160.1 [Leptosphaeria maculans JN3]
gi|312217660|emb|CBX97607.1| hypothetical protein LEMA_P090160.1 [Leptosphaeria maculans JN3]
Length = 694
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 27/163 (16%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCS--------RLTAKLFPLKFPG---------LDLS 60
FL+H+HSDH GL S R P ++CS RL + + F D
Sbjct: 32 FLSHVHSDHLTGLESL--RAPFVYCSAATREILLRLEKYHYRINFAKGVLESRNVTYDRC 89
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGD 120
+ R+ + + + + G + V IDANHC G +VM L GD +LYTGD
Sbjct: 90 MRRLAKPLPLDTPTTIELAPG--NIIRVTCIDANHCVG----AVMFLIEGDGKAILYTGD 143
Query: 121 FRWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSSYAF 162
R E + + L+ L +D +YLD T+ S ++
Sbjct: 144 IRAEIWWVNSLVQNPLLLPYTLGPRRLDCMYLDTTFATKSESY 186
>gi|389740175|gb|EIM81366.1| hypothetical protein STEHIDRAFT_171755 [Stereum hirsutum FP-91666
SS1]
Length = 981
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 44/159 (27%)
Query: 6 ISVDRWTEGSQ--------VYFLTHLHSDHTQGLSSAWARGPLFCS----RLTAKLFPLK 53
I VD +T S ++ LTH HSDH GL++ ++CS + +L P K
Sbjct: 16 IRVDEFTTPSDDPTFVPPALHLLTHTHSDHLTGLAAKSFASKVWCSHDAKEMLLRLEPYK 75
Query: 54 FPGLDLSLIR-----------------VLD-----IGS---WHSISVVSPSSGEKT---F 85
L S IR V+D GS H++ + +P S + +
Sbjct: 76 ERKLKDSDIREDKKLAKAYQHLKVSPQVVDGRKDYHGSRDLLHAVPLNTPISYDMSGLAT 135
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
V + +DANHCPG +VM L G G +L+TGDFR E
Sbjct: 136 VNITLLDANHCPG----AVMYLVEGSEGNILHTGDFRAE 170
>gi|401428799|ref|XP_003878882.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495131|emb|CBZ30435.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 670
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 63/145 (43%), Gaps = 55/145 (37%)
Query: 80 SGEKTFVEVIAIDANHCPGILGCSVMLLFRGD-FGCLLYTGDFRWEASNE------RAEI 132
+G+ F V I ANHCPG +VM LF FG +L+TGDFR+ S E R+
Sbjct: 48 TGDGMFA-VRLILANHCPG----AVMFLFASPVFGTVLHTGDFRFNGSRETWHQFVRSSN 102
Query: 133 GRNTLV--------------------------------------KALKD----DVVDILY 150
GR T V +AL+D ++D+L
Sbjct: 103 GRQTYVPPLPCLIKRGEEQDASTVTAPAVAAPPAPFYEQFIADDEALRDVAHRQLLDVLL 162
Query: 151 LDNTYCNSSYAFPSR-EVAAQQIWV 174
LDNT+C +Y FPS+ EV + I V
Sbjct: 163 LDNTFCAPAYRFPSQWEVTQRVIEV 187
>gi|357616635|gb|EHJ70295.1| putative Artemis protein [Danaus plexippus]
Length = 437
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 82/189 (43%), Gaps = 37/189 (19%)
Query: 6 ISVDRWTEGSQV----YFLTHLHSDHTQGLSSAWARGPL-------FCSRLTAKLFPLKF 54
I VD + ++V YFL+H H+DH GLSS L + + L+A +
Sbjct: 19 IYVDNFENAAKVNARAYFLSHCHADHMHGLSSEELMATLKKSGAKIYTTELSAAIIKTDV 78
Query: 55 PGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVE----VIAIDANHCPGILGCSVMLLFRG 110
++ L +G +S PS E+ E V I A H G S M LFR
Sbjct: 79 NKDIGDHVQSLKMGGTQILSF--PSIPEQNIPELLLTVTLIPAGHSAG----STMFLFRT 132
Query: 111 DFGCLLYTGDFRWEASNERAEIGRNTLVK--ALKDDVVDI----LYLDNTYCNSSY-AFP 163
+L+TGDFR + N L K AL DD I LY+D T+ + +Y FP
Sbjct: 133 TTKTILFTGDFR---------MNPNDLPKYSALHDDGHPIKLTSLYVDTTFLSYNYDNFP 183
Query: 164 SREVAAQQI 172
R + +++
Sbjct: 184 KRSESIEKM 192
>gi|68468735|ref|XP_721426.1| hypothetical protein CaO19.2926 [Candida albicans SC5314]
gi|68469279|ref|XP_721154.1| hypothetical protein CaO19.10443 [Candida albicans SC5314]
gi|46443061|gb|EAL02345.1| hypothetical protein CaO19.10443 [Candida albicans SC5314]
gi|46443344|gb|EAL02626.1| hypothetical protein CaO19.2926 [Candida albicans SC5314]
Length = 830
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 57/204 (27%)
Query: 18 YFLTHLHSDHTQGLSSAWA-------------------------RGPLFCSRLTAKLFPL 52
YFLTH H+DH G+S WA + ++C+ +T +L L
Sbjct: 272 YFLTHFHADHYGGISKKWAYERVFGNDEDAFNNQTFDFDDDSIYKKIIYCTGITGRLLTL 331
Query: 53 KFPGLDLSLIRVLDIGSWHSISVVS-----------------PSSGEKTFVEVIAIDANH 95
++ +D I+ L++ + + I + S+ + V I ANH
Sbjct: 332 RY-SIDPRFIKHLELDTRYKIKSYTEKEDDEEEEEEEEEEEMESNDMTPGLYVTPITANH 390
Query: 96 CPGILGCSVMLLFRGDFGC------LLYTGDFRWEASNERAEIGRNTLVKALKDDV---V 146
CPG + F G +L+ GDFR I R + K+++ +
Sbjct: 391 CPG-----AAIFFFESIGIDNKIYRILHCGDFRVNMEILNHPILRPFSLTHSKNNLLQSI 445
Query: 147 DILYLDNTYCNSSYAFPSREVAAQ 170
D +YLD TY + + P +E+ +
Sbjct: 446 DKVYLDTTYMSPKHNLPKQELVCE 469
>gi|367040249|ref|XP_003650505.1| hypothetical protein THITE_48711 [Thielavia terrestris NRRL 8126]
gi|346997766|gb|AEO64169.1| hypothetical protein THITE_48711 [Thielavia terrestris NRRL 8126]
Length = 630
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 35/162 (21%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG--------LDLSLIRVLDIGSW 70
FL+H+HSDH GL S R PL L++P L+ + R + +
Sbjct: 32 FLSHIHSDHLAGLESL--RSPL-----------LRYPCRINYANGILEARIQRYRHLRNL 78
Query: 71 -HSISVVSPSSGE---KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEAS 126
I + +P+ E ++V +DANHCPG +VM LF G+ +LYTGD R E
Sbjct: 79 LKPIPLDTPTLLELEPGNHIQVTLLDANHCPG----AVMFLFEGNGKAVLYTGDVRSEPW 134
Query: 127 NERAEIGRNTLVK---ALKDDVVDILYLDNTYCNSSYAFPSR 165
+ +L++ LK +D +YLD ++ + + FP++
Sbjct: 135 FVNSLARSPSLIEYSSGLK--TLDTIYLDTSFLD-NIEFPTK 173
>gi|390603656|gb|EIN13048.1| hypothetical protein PUNSTDRAFT_141568 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 899
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 37/140 (26%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLK---------------------FP 55
++ LTH HSDH GLS+ + CS AK L+ F
Sbjct: 33 LHLLTHTHSDHITGLSAKSFAATIICSP-DAKEMLLRYEVYAERNLYETEMRAEKIRAFA 91
Query: 56 GLDLSLIRVLDIGSWH--------SISVVSPSSGE---KTFVEVIAIDANHCPGILGCSV 104
L + + LD ++H +I + +P++ E V + IDANHCPG +V
Sbjct: 92 HLKVEPRKHLDGTTFHHGSRDLLRAIPLHTPTAIELYNSESVVITLIDANHCPG----AV 147
Query: 105 MLLFRGDFGCLLYTGDFRWE 124
M L G G +L+TGDFR E
Sbjct: 148 MFLVEGSKGAVLHTGDFRAE 167
>gi|427709948|ref|YP_007052325.1| beta-lactamase domain-containing protein [Nostoc sp. PCC 7107]
gi|427362453|gb|AFY45175.1| beta-lactamase domain-containing protein [Nostoc sp. PCC 7107]
Length = 556
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 15 SQVYFLTHLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+ V ++H H DH +G L A+ P++ S +T KL PL +P +L+ I L H
Sbjct: 74 ADVVLISHAHPDHARGVLALHKAFPLLPIYASEVTTKLLPLNWPEQNLTEIPQL----CH 129
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAE 131
++ + SP ++ V V A H PG + + +LYTGDF SN R
Sbjct: 130 ALPLRSPIELQEGLV-VELFPAGHLPGAVAILLTYTTEQRTYKVLYTGDFFL--SNSRLV 186
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
G ++ L+ V++L ++ TY S + P R Q+
Sbjct: 187 EGLR--LEELRGLDVNVLIIEGTYGTSRH--PHRRNQENQL 223
>gi|302829404|ref|XP_002946269.1| hypothetical protein VOLCADRAFT_86370 [Volvox carteri f.
nagariensis]
gi|300269084|gb|EFJ53264.1| hypothetical protein VOLCADRAFT_86370 [Volvox carteri f.
nagariensis]
Length = 2638
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 4 GLISVDRWT---EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLS 60
G I VD + G + YFLTH HSDH GLS +W GP++CS TA+L G+D +
Sbjct: 17 GTIVVDAFRYAHPGIKAYFLTHAHSDHYTGLSDSWCCGPIYCSETTARLV-AHLCGVDPA 75
Query: 61 LIRVLDI 67
++ L +
Sbjct: 76 YLKPLPM 82
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 16/95 (16%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFR--GDFGCLLYTGDFRWEASNERAEIGRNTLVKALKD 143
VEV +DANHCPG +V LLFR L+TGD R+ A+ + L+ A +
Sbjct: 146 VEVTLVDANHCPG----AVQLLFRLPASGARYLHTGDMRFCAA-----MATCPLLAAWRG 196
Query: 144 DVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPER 178
+ + LD TYC+ + FP + + + VWP R
Sbjct: 197 --CEAVLLDTTYCSPKHTFPLQVLG---LGVWPGR 226
>gi|448524461|ref|XP_003868993.1| Pso2 DNA cross-link repair protein [Candida orthopsilosis Co
90-125]
gi|380353333|emb|CCG26089.1| Pso2 DNA cross-link repair protein [Candida orthopsilosis]
Length = 572
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 6 ISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
+ VD ++ V+FLTH HSDH + L S G ++CS+LT + L G +R L
Sbjct: 14 VYVDNFSYKGGVFFLTHNHSDHLKSLLSNSFCGRVYCSQLTKDIIALD--GRYCDKLRYL 71
Query: 66 DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC-LLYTGDFRWE 124
+ ++ + T V V +++ HCPG S M LF G L TGD R E
Sbjct: 72 VVKEYNKPFEIQTFC---TSVTVTMLESYHCPG----SCMFLFECANGISCLATGDIRAE 124
Query: 125 ASNERAEIGRNTL---VKALKDDVVDILYLDNTY 155
+ I L + LK +D +YLD T+
Sbjct: 125 KWWVSSLIKNRYLFPYIAGLKK--LDQIYLDTTF 156
>gi|398409002|ref|XP_003855966.1| hypothetical protein MYCGRDRAFT_65158, partial [Zymoseptoria
tritici IPO323]
gi|339475851|gb|EGP90942.1| hypothetical protein MYCGRDRAFT_65158 [Zymoseptoria tritici IPO323]
Length = 515
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 35/176 (19%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKL------FP--LKFPGLDLS--------L 61
FL+H+H+DH GL S +GP ++CS T ++ +P + F L L
Sbjct: 33 FLSHVHTDHLVGLESLSYQGPFIYCSPATREVLLRLEKYPHRMNFANGILESRKQTFKHL 92
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG---DFGCLLYT 118
R+L + + + G K + V DANHC G +VM L G D +LYT
Sbjct: 93 KRLLKPVPLETPTWIELEPGRK--IRVTLFDANHCVG----AVMFLIEGEGLDAKAVLYT 146
Query: 119 GDFR----WEASNERAEIGRNTLVKALKD--DVVDILYLDNTYCNSS---YAFPSR 165
GD R W S R + L K+ +D++YLD T+ N + FPS+
Sbjct: 147 GDIRSERWWVDSLSRYPVLNRYLSHFGKEPRKRLDMIYLDTTFANKTDRYQHFPSK 202
>gi|358336048|dbj|GAA54614.1| DNA cross-link repair 1A protein [Clonorchis sinensis]
Length = 1386
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 13/91 (14%)
Query: 86 VEVIAIDANHCPGILGCSVMLLF--RGDFGCLLYTGDFRWEAS-----NERAEI-GRNTL 137
++V+A+DANHCPG SVM LF + +L+TGDFR+ + A+I G + +
Sbjct: 1078 IDVVAMDANHCPG----SVMFLFHLKSMKRFILHTGDFRFHLDMLLPPSPLADIVGMHPI 1133
Query: 138 -VKALKDDVVDILYLDNTYCNSSYAFPSREV 167
V + + +YLD TYC+S Y FP ++V
Sbjct: 1134 PVSSKAISQLHTVYLDTTYCSSQYDFPPQQV 1164
>gi|390466398|ref|XP_002751323.2| PREDICTED: 5' exonuclease Apollo [Callithrix jacchus]
Length = 72
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%), Gaps = 5/49 (10%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF 50
I+VD W+ ++++FL+H+HSDHT GLSS WAR PL+CS +TA L
Sbjct: 11 IAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLL 58
>gi|148675640|gb|EDL07587.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_b [Mus musculus]
Length = 81
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%), Gaps = 5/49 (10%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF 50
I+VD W+ ++++FLTH+H DHT GLSS WAR PL+CS +TA L
Sbjct: 11 IAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLL 58
>gi|426196379|gb|EKV46307.1| hypothetical protein AGABI2DRAFT_222438 [Agaricus bisporus var.
bisporus H97]
Length = 866
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 54/196 (27%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF-------------------------- 50
++ LTH H+DH GLS+ + CS ++
Sbjct: 35 LHLLTHTHTDHINGLSAKSFGHRVVCSHDAKEMLLRHEVYAERELKQRDLRAERVRTFAH 94
Query: 51 ----PLKFPGLD--------LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPG 98
P+ P + L IRV H ++ S+ E+ V + A+DANHCPG
Sbjct: 95 LKIDPVHHPAIAYYQGSRDLLKPIRV------HEPTLFELSNNER--VTITALDANHCPG 146
Query: 99 ILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA-LKDDVVDILY--LDNTY 155
+VM L G G +L+TGDFR E + + RN ++ L+ IL+ LD Y
Sbjct: 147 ----AVMYLIEGSKGAVLHTGDFRAEPWFLES-LSRNPYLQPYLESSTGGILHQSLDCIY 201
Query: 156 CNSSYAFPSREVAAQQ 171
+++ AF E+ ++
Sbjct: 202 LDTACAFLPLEIPSKN 217
>gi|413918212|gb|AFW58144.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
Length = 233
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKL 49
EG YFL+H H DH GL+ W GP++CS LTA+L
Sbjct: 187 EGCSAYFLSHFHHDHYGGLTKKWCHGPIYCSALTARL 223
>gi|401402020|ref|XP_003881150.1| hypothetical protein NCLIV_041920 [Neospora caninum Liverpool]
gi|325115562|emb|CBZ51117.1| hypothetical protein NCLIV_041920 [Neospora caninum Liverpool]
Length = 234
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 66/177 (37%)
Query: 5 LISVDRWTE---GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL 61
+I VD + + GS V+FL+H H+DH GLSS+W+RG ++CS +T
Sbjct: 22 VILVDTFKKVPRGSFVFFLSHFHADHYSGLSSSWSRGTVYCSVVTG-------------- 67
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
++ + + G KT+ L+TGDF
Sbjct: 68 ----------AVMFLCKTKGGKTY------------------------------LHTGDF 87
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAF-PSREVAAQQIWVWPE 177
R+ +R + AL + +D L+LD TY Y F P + I V E
Sbjct: 88 RY----DRHMVDH----PALANCHIDTLFLDTTYAKPEYEFQPQADTIQHAINVAEE 136
>gi|282899541|ref|ZP_06307505.1| Beta-lactamase-like protein [Cylindrospermopsis raciborskii CS-505]
gi|281195420|gb|EFA70353.1| Beta-lactamase-like protein [Cylindrospermopsis raciborskii CS-505]
Length = 512
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 20/172 (11%)
Query: 7 SVDRWTEGSQVYFLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGLDLSLIR 63
S+ + + + ++H H DH +GL S A+ P++ S +T+KL PL + L+ +
Sbjct: 17 SITQENSPADLVLISHAHPDHCRGLLSLNRAFPLLPIYTSEVTSKLLPLNWTELETT--- 73
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG---DFGCLLYTGD 120
++ ++ + SP E+ V V A H PG +++L ++G D+ LLYTGD
Sbjct: 74 -ENLTFCQALPLRSPIEVEENLV-VELFPAGHLPG--AVAILLTYQGPERDYK-LLYTGD 128
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
F SN R G ++ L+ +D+L ++ +Y S + P R QI
Sbjct: 129 FF--LSNSRLVDGLR--LEELRGLNLDVLLIEGSYGTSRH--PHRRHQENQI 174
>gi|413918213|gb|AFW58145.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
Length = 256
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKL 49
EG YFL+H H DH GL+ W GP++CS LTA+L
Sbjct: 187 EGCSAYFLSHFHHDHYGGLTKKWCHGPIYCSALTARL 223
>gi|409081145|gb|EKM81504.1| hypothetical protein AGABI1DRAFT_69756 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 866
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 54/196 (27%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF-------------------------- 50
++ LTH H+DH GLS+ + CS ++
Sbjct: 35 LHLLTHTHTDHINGLSAKSFGHRVVCSHDAKEMLLRHEVYAERELKQRDLRAERVRTFAH 94
Query: 51 ----PLKFPGLD--------LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPG 98
P+ P + L IRV H ++ S+ E+ V + A+DANHCPG
Sbjct: 95 LKIDPVHHPAIAYYQGSRDLLKPIRV------HEPTLFELSNNER--VTITALDANHCPG 146
Query: 99 ILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA-LKDDVVDILY--LDNTY 155
+VM L G G +L+TGDFR E + + RN ++ L+ IL+ LD Y
Sbjct: 147 ----AVMYLIEGSKGAVLHTGDFRAEPWFLES-LSRNPYLQPYLESSTGGILHQSLDCIY 201
Query: 156 CNSSYAFPSREVAAQQ 171
+++ AF E+ ++
Sbjct: 202 LDTACAFLPLEIPSKN 217
>gi|402582432|gb|EJW76378.1| hypothetical protein WUBG_12710 [Wuchereria bancrofti]
Length = 137
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 25/129 (19%)
Query: 4 GLISVDRWTEGSQV--YFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPL-----KFPG 56
I++D + V +FL+ HS + L+S W R + CS +TAKL + K
Sbjct: 14 NFIAIDVFGTNPDVKYFFLSSAHSRQCRKLTSEWQRNRICCSPITAKLLSVISSRRKEYK 73
Query: 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGD----F 112
+ IR LD+ WH + V+ +DANH PG SVML+ +
Sbjct: 74 ISDKWIRPLDLNVWHKMER----------FRVMLVDANHAPG----SVMLIIESEHHNTL 119
Query: 113 GCLLYTGDF 121
+LYTG F
Sbjct: 120 RRILYTGFF 128
>gi|356570279|ref|XP_003553317.1| PREDICTED: LOW QUALITY PROTEIN: DNA cross-link repair protein
SNM1-like [Glycine max]
Length = 324
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKL 49
EG YFLTH H DH GLS W+ GP++C LT +L
Sbjct: 188 EGCSAYFLTHFHCDHYNGLSMKWSHGPIYCYPLTGQL 224
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 255 WRATGGTQTEKLK---EALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
+R TG T +E++ E + V + + IY VPYS+HS FTE+ +F+ ++P I
Sbjct: 245 FRPTGWTFSERISNDLELIKPVSKRNITIYGVPYSEHSSFTELRDFVQFLKPDKI 299
>gi|440682883|ref|YP_007157678.1| beta-lactamase domain protein [Anabaena cylindrica PCC 7122]
gi|428680002|gb|AFZ58768.1| beta-lactamase domain protein [Anabaena cylindrica PCC 7122]
Length = 561
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 15 SQVYFLTHLHSDHTQGL---SSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+ + ++H H DH +GL + A+ P++ S +T+KL PL +P D I +L
Sbjct: 74 ADLVLISHAHPDHARGLLALNQAFPLLPIYASEVTSKLLPLNWPEQDPQEIPLL----CQ 129
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG---DFGCLLYTGDFRWEASNE 128
++ + SP ++ V V A H PG +++L + D+ LLYTGDF SN
Sbjct: 130 ALPLQSPIEIQENLV-VELFPAGHLPG--AVAILLTYHTQDRDYK-LLYTGDFFL--SNS 183
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
R G ++ L+ +D+L ++ Y S + P R Q+
Sbjct: 184 RLVEGLR--LEELRGLNIDVLLIEGNYGTSRH--PHRRNQENQL 223
>gi|325968825|ref|YP_004245017.1| mRNA 3'-end processing factor [Vulcanisaeta moutnovskia 768-28]
gi|323708028|gb|ADY01515.1| mRNA 3'-end processing factor, conjectural [Vulcanisaeta
moutnovskia 768-28]
Length = 433
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 19 FLTHLHSDHTQGLSSAWARGP--LFCSRLTAKLFPLKF-----------PGLDLSLIRVL 65
FL+H H DH L S + P ++ + LT +L + F P D + VL
Sbjct: 60 FLSHAHLDHCGALPSLYVSSPPPVYATPLTLELADIMFKDAIKLSGYYLPYEDEEIKAVL 119
Query: 66 DIGSWHSISVVSPSSGEKTF----VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
D H+I V + GE V+ I+A H PG S++ L + +L+TGDF
Sbjct: 120 D----HAIPV---TYGEDIDISKDVKATIINAGHVPG----SMLTLLELNGARVLFTGDF 168
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQT 181
+SN + R V ++ D VD++ ++ TY +++ P EV + I V E +++
Sbjct: 169 NLASSN----LLRGADVNSVPKD-VDVVIMEGTYVANTHP-PREEVEREFIKVIKETIES 222
>gi|171185767|ref|YP_001794686.1| beta-lactamase domain-containing protein [Pyrobaculum neutrophilum
V24Sta]
gi|170934979|gb|ACB40240.1| beta-lactamase domain protein [Pyrobaculum neutrophilum V24Sta]
Length = 315
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 111/298 (37%), Gaps = 61/298 (20%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSP 78
+TH HSDH +S R P+ +R T ++ L I+V +
Sbjct: 34 LITHGHSDH---ISRYALRYPVVATRETLAAMSVR-----------LGAAPARRITVAAG 79
Query: 79 SSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLV 138
E VEV ++A H ILG SVM L D L+TGDF NT+
Sbjct: 80 RVVEVDGVEVAVLEAGH---ILG-SVMYLVEVDGLQALFTGDF-------------NTVG 122
Query: 139 KALKD-----DVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIFTT 193
L D + VD+L ++ TY + +Y FP+R ++ ER G +
Sbjct: 123 TILTDAAEPVENVDVLVMEATYGDPAYVFPNRAEVYNELLDLVERHS-----GDGGVAIA 177
Query: 194 KTSLTRVRAVPR-YSFSIDTLESLNTMHPTIGI-MPSGLPWVVKPLKGGGSL---PGSLF 248
L + + V R ++ + +GI G V+ P SL P
Sbjct: 178 AYPLGKAQEVARLLGHRAGAHAAVARYNRALGISTGGGREVVIVP-----SLRWAPRGYV 232
Query: 249 SSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
S W A + L+E +Y +P SDHS F + +F + P I
Sbjct: 233 RVEVSGWYAEEEARRRALREG----------VYGIPLSDHSDFPNLVQFAQEISPRLI 280
>gi|443916875|gb|ELU37809.1| ataxia telangiectasia mutated [Rhizoctonia solani AG-1 IA]
Length = 3918
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 23/121 (19%)
Query: 6 ISVDRWTEGS----QVYFLTHLHSDHTQGLSSAWARGPLFCS-RLTAKLFPLKFPGLD-- 58
I+VD + G YFL+H HSDH LSS+W GP++CS + + F L+
Sbjct: 262 IAVDAFCYGKIPEVTAYFLSHAHSDHYTNLSSSWKNGPIYCSCEMDISVDSAGFNRLEAV 321
Query: 59 --LSLIR-VLDIGS-W-----HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFR 109
+LI+ +L + S W + +V P +G V V ID NHCPG S + +F
Sbjct: 322 TTANLIKHMLRVDSKWVNPLPDNQAVEIPDTGG---VRVTLIDGNHCPG----SSLFVFS 374
Query: 110 G 110
G
Sbjct: 375 G 375
>gi|452983046|gb|EME82804.1| hypothetical protein MYCFIDRAFT_109779, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 337
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 46/201 (22%)
Query: 6 ISVDRWTEGSQ----VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKL------FP--LK 53
I +DR+ +FL+H+HSDH GL S A PL CS T +L +P +
Sbjct: 14 IRIDRFRHDPNRPALAHFLSHVHSDHLVGLESRNAV-PLHCSPATRELVLRLEKYPNRMN 72
Query: 54 FPGLDL-----------SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGC 102
F L +L+R + + + I ++SP + + V DANHC G
Sbjct: 73 FAKGILESRKQTYKHLKTLLRPIPLETPTEI-MLSPENT----IRVTLFDANHCVG---- 123
Query: 103 SVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLV--------KALKDDVVDILYLDNT 154
+VM L G+ +LYTGD R E + + TL+ K L+ +D +YLD T
Sbjct: 124 AVMFLIEGNGKAILYTGDIRSEPWWVNSICRQPTLLPYVCSGNSKPLRQ--LDNIYLDTT 181
Query: 155 YC--NSSY-AFPSREVAAQQI 172
+ N Y FPS+ +++
Sbjct: 182 FASKNDRYRHFPSKAEGIREL 202
>gi|156053902|ref|XP_001592877.1| hypothetical protein SS1G_05799 [Sclerotinia sclerotiorum 1980]
gi|154703579|gb|EDO03318.1| hypothetical protein SS1G_05799 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1133
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 29/176 (16%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLF---PLKFPGLDLS--LIRVLDIGSW 70
YFL+H+HSDH GL + + P ++CS T ++ + L+L+ ++ +
Sbjct: 30 AYFLSHVHSDHLVGLDNDRVKLPFVYCSAATKEILIRLEKRRDRLNLAQGILEKEERTYK 89
Query: 71 HSISVVSP---------SSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
H +V+ P K V V DANHC G +VM LF + +LYTGD
Sbjct: 90 HLKNVLKPVPLDTPTLIELAPKNEVRVTLFDANHCTG----AVMFLFERENTAVLYTGDI 145
Query: 122 R---WEASNERAEIGRNTLVKALKDDV--VDILYLDNTYCNSSYAFPSREVAAQQI 172
R W +N + RN + + +D +YLD + FP++ +++
Sbjct: 146 RSEPWFVNN----LTRNPFLIEYTSGMKTLDCIYLDTSNI-GPMEFPTKAEGLKEL 196
>gi|440798159|gb|ELR19227.1| hypothetical protein ACA1_263970 [Acanthamoeba castellanii str.
Neff]
Length = 180
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 21/118 (17%)
Query: 45 LTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSV 104
+TAKL +K G+ + +R L S+ +P E T EV + ANHCPG +V
Sbjct: 57 ITAKLMFIKL-GVSPNYVRPL--------SMFTPHMVEGT--EVTLLPANHCPG----AV 101
Query: 105 MLLFRGDFGCLLYTGDFRWEASNE------RAEIGRNTLVKALKDDVVDILYLDNTYC 156
+LLF+ D +L+ GDFR+ + + R EI + + L++ L+L TYC
Sbjct: 102 LLLFKVDGRYILHVGDFRYHPNMQSYDELRRNEIHKRVVELVLREKRESTLFLVGTYC 159
>gi|298492287|ref|YP_003722464.1| beta-lactamase domain-containing protein ['Nostoc azollae' 0708]
gi|298234205|gb|ADI65341.1| beta-lactamase domain protein ['Nostoc azollae' 0708]
Length = 571
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 17 VYFLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW-HS 72
+ ++H H+DH +GL S A+ P++ S +T+KL PL +P D DI ++ H+
Sbjct: 76 LVLISHAHADHARGLLSLNQAFPMLPIYASEVTSKLLPLNWPEQDPE-----DIPAFCHA 130
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
+ + SP ++ + V A H PG + + + LLYTGDF SN R
Sbjct: 131 LPLRSPVEIQENLI-VELFPAGHLPGAVAILLTYHTQNRDYKLLYTGDFFL--SNSRLVE 187
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
G ++ L+ +++L ++ +Y S + P R Q+
Sbjct: 188 GLR--LEELRGLNLNVLLIEGSYGTSRH--PHRRNQENQL 223
>gi|219121698|ref|XP_002181198.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407184|gb|EEC47121.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 503
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 127/343 (37%), Gaps = 70/343 (20%)
Query: 16 QVYFLTHLHSDHTQGLS-SAWARGP--LFCSRLTAKLF------PLKFPGLDLSLIRVLD 66
V+ L+H H DH L +GP + C+ TA L P K+ V++
Sbjct: 34 NVFILSHWHGDHYGSLPRDGKYQGPSLIHCTPTTAALLREIHQVPEKY---------VVE 84
Query: 67 IGSWHSISVVSPSSGEK--TFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
G + + P K + V++ DANHCP G +++++ D L+TGD R+
Sbjct: 85 HG-YGETWLFHPLGNTKGLSTVQITFYDANHCP---GAAIIVVEMADGKVHLHTGDMRYH 140
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL----- 179
I L +A +D + LD TY + + F +E A I + E L
Sbjct: 141 TMMNVYPI----LERAASSRAIDTVLLDTTYSDPKHNFQPQEAAIDAIAAYSEGLLGTSR 196
Query: 180 ----QTMHLLGFHDI-----------------FTTKTSLTRVRAVPRYSFSIDTLESLNT 218
+ LL + I + + +R + ++ S + T
Sbjct: 197 KCCSNVLILLSCYSIGKEKVLWEVSSRTNQLVYVNDRKMRMMRCIQKHHESSSQIVQRCT 256
Query: 219 MHPT---IGIMPSGL-----PWVVKPLKGGGSLPGSLFSSYQ-------SKWRATGGTQT 263
P I ++P GL P+ +L + Y + W A G
Sbjct: 257 TDPNATDIHVIPMGLAGELWPYFQPNYWACAEYAKALETEYTKVVAFIPTGW-ADGSKWN 315
Query: 264 EKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
+K + I + YS+HS F+E++ F+ ++P +
Sbjct: 316 KKNATSKFDCKGIEVEIRLISYSEHSSFSELKTFVEFLRPRKV 358
>gi|295673106|ref|XP_002797099.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282471|gb|EEH38037.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 83 KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-AL 141
+ V V DANHCPG +VM L G+ +LYTGD R E+ I L+ L
Sbjct: 75 RNHVRVTLFDANHCPG----AVMFLIEGNGKTILYTGDIRAESWWVGNLIRNPVLIPYTL 130
Query: 142 KDDVVDILYLDNTYCNSS---YAFPSREVAA----QQIWVWPERLQTMHLLGFH 188
D D +YLD T+ S +FPS+ ++I +PE T+ L H
Sbjct: 131 GDKRFDKIYLDTTFATKSDVYQSFPSKAEGIRELLEKINAYPE--DTIFYLRIH 182
>gi|119872485|ref|YP_930492.1| mRNA 3-end processing factor [Pyrobaculum islandicum DSM 4184]
gi|119673893|gb|ABL88149.1| putative mRNA 3-end processing factor [Pyrobaculum islandicum DSM
4184]
Length = 314
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 89/227 (39%), Gaps = 39/227 (17%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKD-- 143
V + ++A H ILG SVM L D +L+TGDF NT L D
Sbjct: 87 VHIAVLEAGH---ILG-SVMYLVEIDDLQVLFTGDF-------------NTTGTILTDAA 129
Query: 144 ---DVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIFTTKTSLTRV 200
D DIL +D TY + +Y FP+R ++ ER T + L +
Sbjct: 130 EPVDKPDILVMDATYGDPAYIFPNRAEVYNELLDVVERYTTSG-----KVAIVAYPLGKA 184
Query: 201 RAVPR-YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG 259
+ V + + ++ + +GI P+G+ V + S P F S W A
Sbjct: 185 QEVAKLFGTRAGAHITVARYNRALGI-PTGMEKNVVIVPSLRSAPTGYFKVEVSGWYAEE 243
Query: 260 GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNI 306
T+ E K +Y +P SDHS F + EF+ P I
Sbjct: 244 TTKREAAKRG----------VYGIPLSDHSDFPSLVEFVTETSPKLI 280
>gi|186681842|ref|YP_001865038.1| beta-lactamase domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186464294|gb|ACC80095.1| beta-lactamase domain protein [Nostoc punctiforme PCC 73102]
Length = 556
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 17/178 (9%)
Query: 1 MEKGLISVDRWTEG---SQVYFLTHLHSDHTQGL---SSAWARGPLFCSRLTAKLFPLKF 54
+ KGL +R + + + ++H H DH++GL A+ + P++ S +T+KL PL +
Sbjct: 57 LAKGLTKSERGSSSPLPADLVLISHAHPDHSRGLLALHKAYPKLPIYGSEVTSKLLPLNW 116
Query: 55 PGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC 114
D I H++ + SP + V + A H PG + + +
Sbjct: 117 LDQDAEEISKF----CHALPLRSPVEFQDGLVAEL-FPAGHLPGAVAILLTYTTKQRTYK 171
Query: 115 LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
LLYTGDF SN R G ++ L+ +D+L ++ +Y S + P R Q+
Sbjct: 172 LLYTGDFFL--SNSRLVEGLR--LEELRGLDLDVLIIEGSYGTSRH--PHRRNQENQL 223
>gi|190408363|gb|EDV11628.1| interstrand crosslink repair protein [Saccharomyces cerevisiae
RM11-1a]
Length = 371
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGC--------LLYTGDFRWEASNERAEIGRNTL 137
+ V+ +DANHCPG ++++LF+ +L+TGDFR SN +
Sbjct: 19 ISVVTLDANHCPG----AIIMLFQEFLANSYDKPIRQILHTGDFR---SNAKMIETIQKW 71
Query: 138 VKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERL 179
+ ++ +D +YLD TY Y FPS+ + + + RL
Sbjct: 72 LAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRL 113
>gi|336365546|gb|EGN93896.1| hypothetical protein SERLA73DRAFT_78273 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378103|gb|EGO19262.1| hypothetical protein SERLADRAFT_443308 [Serpula lacrymans var.
lacrymans S7.9]
Length = 950
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 37/140 (26%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFP-----GLDLSLIRV------- 64
++ L+H H+DH GL++ + CS AK L+ L + +R
Sbjct: 36 LHLLSHTHADHINGLAAKSFGYKVICSN-DAKEMLLRHEVYAERALHENDMRAVVKRTFA 94
Query: 65 -LDIGSW----------------HSISVVSPSSGEKTFVEVIAI---DANHCPGILGCSV 104
L + W ++ + +P+ E +E + I DANHCPG +V
Sbjct: 95 HLKVDPWIQPDGTKFYHGSRDLLFALPLNTPTPFELNALETVTITLIDANHCPG----AV 150
Query: 105 MLLFRGDFGCLLYTGDFRWE 124
M L +GD G +L+TGDFR E
Sbjct: 151 MFLIQGDKGAILHTGDFRAE 170
>gi|221487478|gb|EEE25710.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1172
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 11 WTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGL 57
+++ V+ L+HLH+DH GL W G +FCS T +L L+FP L
Sbjct: 202 YSDNPWVFLLSHLHTDHISGLHGRWQEGRIFCSPTTRRLLLLRFPNL 248
>gi|307594462|ref|YP_003900779.1| RNA-metabolising metallo-beta-lactamase [Vulcanisaeta distributa
DSM 14429]
gi|307549663|gb|ADN49728.1| RNA-metabolising metallo-beta-lactamase [Vulcanisaeta distributa
DSM 14429]
Length = 433
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 34/179 (18%)
Query: 19 FLTHLHSDHTQGLSSAWARG--PLFCSRLTAKLFPLKF-----------PGLDLSLIRVL 65
FL+H H DH L S + P++ + LT +L + F P D + VL
Sbjct: 60 FLSHAHLDHCGALPSLYVSSPPPVYATPLTLELADIMFKDAIKLSGYYLPYEDEEIKAVL 119
Query: 66 DIGSWHSISVVSPSSGEKT----FVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
D H+I V + GE V+ I+A H PG S++ L + +L+TGDF
Sbjct: 120 D----HAIPV---TYGEDVDISKDVKATIINAGHVPG----SMLTLLEINGARVLFTGDF 168
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQ 180
SN + R + + D VD++ ++ TY +++ P EV + I V E ++
Sbjct: 169 NLSQSN----LLRGADINNVPRD-VDVVIMEGTYVTNTHP-PREEVEREFIRVIKETIE 221
>gi|237830215|ref|XP_002364405.1| hypothetical protein TGME49_111730 [Toxoplasma gondii ME49]
gi|211962069|gb|EEA97264.1| hypothetical protein TGME49_111730 [Toxoplasma gondii ME49]
gi|221507276|gb|EEE32880.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 1169
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 11 WTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGL 57
+++ V+ L+HLH+DH GL W G +FCS T +L L+FP L
Sbjct: 202 YSDNPWVFLLSHLHTDHISGLHGRWQEGRIFCSPTTRRLLLLRFPNL 248
>gi|85090777|ref|XP_958580.1| hypothetical protein NCU05966 [Neurospora crassa OR74A]
gi|28919953|gb|EAA29344.1| predicted protein [Neurospora crassa OR74A]
Length = 570
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDD 144
++V +DANHCPG +VM LF G LYTGD R E + A ++V+ A
Sbjct: 79 IQVTLLDANHCPG----AVMFLFEGQGKAALYTGDIRSEPWHVNAIARSPSMVQYAYGLK 134
Query: 145 VVDILYLDNTYCNSSYAFPSR 165
+D +YLD ++ FP++
Sbjct: 135 TLDTIYLDTSFV-EDIEFPTK 154
>gi|336268785|ref|XP_003349155.1| hypothetical protein SMAC_06991 [Sordaria macrospora k-hell]
gi|380089485|emb|CCC12584.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 607
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDD 144
++V +DANHCPG +VM LF G LYTGD R E + A ++V+ A
Sbjct: 112 IQVTLLDANHCPG----AVMFLFEGQGKAALYTGDIRSEPWHVNAIARSPSMVQYAYGLK 167
Query: 145 VVDILYLDNTYCNSSYAFPSR 165
+D +YLD ++ FP++
Sbjct: 168 TLDTIYLDTSFI-EDIKFPTK 187
>gi|336466543|gb|EGO54708.1| hypothetical protein NEUTE1DRAFT_124903 [Neurospora tetrasperma
FGSC 2508]
Length = 578
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDD 144
++V +DANHCPG +VM LF G LYTGD R E + A ++V+ A
Sbjct: 87 IQVTLLDANHCPG----AVMFLFEGQGKAALYTGDIRSEPWHVNAIARSPSMVQYAYGLK 142
Query: 145 VVDILYLDNTYCNSSYAFPSR 165
+D +YLD ++ FP++
Sbjct: 143 TLDTIYLDTSFI-EDIEFPTK 162
>gi|350286570|gb|EGZ67817.1| hypothetical protein NEUTE2DRAFT_95709, partial [Neurospora
tetrasperma FGSC 2509]
Length = 572
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDD 144
++V +DANHCPG +VM LF G LYTGD R E + A ++V+ A
Sbjct: 71 IQVTLLDANHCPG----AVMFLFEGQGKAALYTGDIRSEPWHVNAIARSPSMVQYAYGLK 126
Query: 145 VVDILYLDNTYCNSSYAFPSR 165
+D +YLD ++ FP++
Sbjct: 127 TLDTIYLDTSFI-EDIEFPTK 146
>gi|401411411|ref|XP_003885153.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325119572|emb|CBZ55125.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 1250
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 11 WTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGL 57
+++ V+ L+HLH+DH GL W G +FCS T +L L+FP L
Sbjct: 240 YSDNPWVFLLSHLHADHIGGLHGRWQDGSIFCSPTTRRLLLLRFPAL 286
>gi|302689741|ref|XP_003034550.1| hypothetical protein SCHCODRAFT_256591 [Schizophyllum commune H4-8]
gi|300108245|gb|EFI99647.1| hypothetical protein SCHCODRAFT_256591 [Schizophyllum commune H4-8]
Length = 834
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 21/100 (21%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA---------SNERAEIGRNT 136
V V IDANHCPG +VM L G+ G +L+TGDFR E + + I
Sbjct: 69 VTVTLIDANHCPG----AVMYLIEGNKGAILHTGDFRAEPWFLDGLTRHPSLQPYIHNGY 124
Query: 137 LVKALKDDV--------VDILYLDNTYCNSSYAFPSREVA 168
L K +D+ +D +YLD S PS+ A
Sbjct: 125 LNKLSPEDLALSTVLKTLDAIYLDTATVTSQLNVPSKARA 164
>gi|430003220|emb|CCF19005.1| Putative hydrolase of the metallo-beta-lactamase superfamily
[Rhizobium sp.]
Length = 555
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 17/193 (8%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
E + +TH H DH L+ W P++ S TA L K R + GS
Sbjct: 67 ENLKAIIITHAHEDHYGALNDLWPGLNVPVYASGFTAGLLEAK---------RNFE-GSR 116
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERA 130
I V +G++ VE I+A + + L+ R G L++TGD++ + +
Sbjct: 117 ADIPVTPFKAGDRISVEPFDIEALAVNHSIPEPMSLVIRTPLGNLVHTGDWKIDHAPSLG 176
Query: 131 EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDI 190
+ +A+ D+ V L D+T N PS E ++ + E + G I
Sbjct: 177 PLTDEARFRAVGDEGVLALMCDSTNANREGISPSEEEVSEGLRKIIENAE-----GRVAI 231
Query: 191 FTTKTSLTRVRAV 203
T +++ R+R++
Sbjct: 232 TTFSSNVGRIRSI 244
>gi|159463130|ref|XP_001689795.1| artemis-related DNA-crosslink repair exonuclease [Chlamydomonas
reinhardtii]
gi|158283783|gb|EDP09533.1| artemis-related DNA-crosslink repair exonuclease [Chlamydomonas
reinhardtii]
Length = 624
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 79 SSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
S G TF +V A+DANHCPG S M LF+G FG +L+TGD R+
Sbjct: 48 SYGGTTF-DVTALDANHCPG----SAMFLFQGAFGNILHTGDCRF 87
>gi|154295597|ref|XP_001548233.1| hypothetical protein BC1G_13069 [Botryotinia fuckeliana B05.10]
Length = 352
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPLKFP------GLDLSLIRVLDIGSWH 71
FL+H+HSDH +GL + P ++CS T ++ L+ L ++ H
Sbjct: 32 FLSHVHSDHLEGLDNDRVNLPFVYCSAATREIL-LRLEKRRDRLNLAQGILEKEKRTYKH 90
Query: 72 SISVVSPSSGE---------KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFR 122
SV+ P E K V V D+NHC G +VM LF + +LYTGD R
Sbjct: 91 LKSVLKPIPLETPTLIELAPKNEVRVTLFDSNHCTG----AVMFLFEKENIAVLYTGDVR 146
Query: 123 ---WEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
W +N +K +D +YLD T AFP++ +++
Sbjct: 147 SEIWFVNNLTRSPFLIEYTSGMK--TLDCIYLD-TSNTGPLAFPTKADGLKEM 196
>gi|429848498|gb|ELA23972.1| DNA repair protein [Colletotrichum gloeosporioides Nara gc5]
Length = 638
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 24/154 (15%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKL------FPLKF---PGLDLSLIRVLD-- 66
FL+H+HSDH GL S R P ++CS T ++ +P + G+ + ++
Sbjct: 32 FLSHIHSDHLAGLESL--RSPFVYCSAATREMLLRLERYPCRINYAKGILEARVQTYKHL 89
Query: 67 IGSWHSISVVSPSSGEKT---FVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
+ + +P++ E ++V +DANHCPG SVM L +LYTGD R
Sbjct: 90 KNLLKPLPLDTPTTLELAPGRCIQVTLLDANHCPG----SVMFLIEDTHHAVLYTGDIRS 145
Query: 124 EASNERAEIGRNTLVKALKDDV--VDILYLDNTY 155
E A + RN V + +D +YLD ++
Sbjct: 146 EPWFVNA-VARNPAVVEYTCGIKTLDKIYLDTSF 178
>gi|119494059|ref|ZP_01624611.1| hypothetical protein L8106_04196 [Lyngbya sp. PCC 8106]
gi|119452196|gb|EAW33398.1| hypothetical protein L8106_04196 [Lyngbya sp. PCC 8106]
Length = 518
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 23/195 (11%)
Query: 5 LISVDRWTEGSQVYFLTHLHSDHTQGL---SSAWARGPLFCSRLTAKLFPLKFPGLD-LS 60
L++ + ++ + F TH H+DH GL A+ + P++ S +TA+L PL +P +
Sbjct: 21 LLATSKRSQPADFVFCTHAHADHAIGLLALHQAYPQLPIYASEVTAQLLPLNWPEISPQE 80
Query: 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--LLYT 118
+ + SW S + F A H PG +++L + LLYT
Sbjct: 81 MPQFCQPLSWKSEIQLQKGLSATLF------PAGHLPG--AAAILLKYHAPERTYKLLYT 132
Query: 119 GDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPER 178
GDF SN R G + L+ D+L L+ +Y + + P R Q+ ER
Sbjct: 133 GDFF--LSNSRLVEGLP--LGELRSLKPDVLILEGSYGTARH--PHRRQLENQL---AER 183
Query: 179 LQTMHLLGFHDIFTT 193
++ G+ +F T
Sbjct: 184 IEQALTSGYSILFPT 198
>gi|134054879|emb|CAK36892.1| unnamed protein product [Aspergillus niger]
Length = 871
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDD 144
+ DANHC G +VM L G+ +LYTGD R E + I L+ L +
Sbjct: 185 IRATLFDANHCTG----AVMFLIEGNGKAILYTGDIRAEPWWVNSIIRNPVLIPYTLGNK 240
Query: 145 VVDILYLDNTYCNSS---YAFPSREVAAQQ----IWVWPER 178
+D +Y+DNT+ S + FPS+ ++ I +P+R
Sbjct: 241 QLDNIYIDNTFARPSHVCHTFPSKAEGLKELLNKIQAYPDR 281
>gi|393238139|gb|EJD45677.1| hypothetical protein AURDEDRAFT_103419, partial [Auricularia
delicata TFB-10046 SS5]
Length = 738
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 35/141 (24%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCS----RLTAKLFP----LKFPGLDLSLIR----- 63
+Y L+H H DH GLS+ + CS ++ + P + + G D +L
Sbjct: 34 LYLLSHTHVDHLTGLSAKSFGARVICSPDAKQMLLNMEPAADRIAYDGGDRALRNRPYSH 93
Query: 64 -----------VLDIGSWHSISVVSPSSGEKTF-------VEVIAIDANHCPGILGCSVM 105
+D + + P + + F V + +DANHC G +VM
Sbjct: 94 LKIDPVTREDGTVDYSMTRDLLLPVPLNAPRVFELSDKQHVSITVLDANHCLG----AVM 149
Query: 106 LLFRGDFGCLLYTGDFRWEAS 126
L GD G +L+TGDFR E +
Sbjct: 150 FLVEGDKGAVLHTGDFRAEPA 170
>gi|402590918|gb|EJW84848.1| hypothetical protein WUBG_04239 [Wuchereria bancrofti]
Length = 335
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 31/177 (17%)
Query: 2 EKGLISVDRWTEGS---QVYFLTHLHSDHTQGLSSAW------ARGPLFCSRLTAKLFPL 52
E ISVD++ +FL+H HSDH GL + +F +K+F
Sbjct: 10 ECNWISVDQFHSNDLKFSAFFLSHCHSDHMHGLDDDQFYKLIKGKFAVFYCHKISKIFLG 69
Query: 53 KFPGLDLSLIRVLDIGSWHSISVVSPSSGEK-------TFVEVIAIDANHCPGILGCSVM 105
P L ++ +V + E+ + +V +DA H PG S+M
Sbjct: 70 SEPHYARLLEHIVPKNYNEKFTVTAICDNEERESLLPSSSADVTFLDAQHIPG----SIM 125
Query: 106 LLFRGDFGC-LLYTGDFR-----WEASNERAEIGRNTLVKALKDDVVDILYLDNTYC 156
+LF G LLYTGD+R W A + + ++ K L D LY D+T+C
Sbjct: 126 ILFEFHDGFRLLYTGDYRLSKDDWIACDMLKDPYASSGFKRL-----DALYFDSTFC 177
>gi|367029759|ref|XP_003664163.1| hypothetical protein MYCTH_52175 [Myceliophthora thermophila ATCC
42464]
gi|347011433|gb|AEO58918.1| hypothetical protein MYCTH_52175 [Myceliophthora thermophila ATCC
42464]
Length = 578
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 83 KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK--- 139
+ ++V +DANHCPG +VM LF G +LYTGD R E A +L++
Sbjct: 75 ENHLQVTLLDANHCPG----AVMFLFEGQGKAVLYTGDVRAEPWFVNAIARSPSLIEYSS 130
Query: 140 ALKDDVVDILYLDNTYCNSSYAFPSR 165
LK +D +YLD ++ + FP++
Sbjct: 131 GLK--TIDTIYLDTSFID-DVEFPTK 153
>gi|427728695|ref|YP_007074932.1| exonuclease [Nostoc sp. PCC 7524]
gi|427364614|gb|AFY47335.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Nostoc sp. PCC 7524]
Length = 551
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Query: 15 SQVYFLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+ + +TH H DH +GL S A+ P++ S +T+KL PL + D I H
Sbjct: 69 ADLVLVTHAHPDHARGLLSLHQAFPHLPIYGSEVTSKLLPLNWLEQDPQTIPQF----CH 124
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAE 131
++ + SP + V V A H PG + + LLYTGDF SN R
Sbjct: 125 ALPLRSPIELDDGLV-VEIFPAGHLPGAVAILLTYTTEQRIYKLLYTGDFFL--SNSRLV 181
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
G ++ L+ +++L ++ TY S + P R Q+
Sbjct: 182 EGLR--LEELRGLDLNVLIIEGTYGTSRH--PHRRNQENQL 218
>gi|302507780|ref|XP_003015851.1| DNA repair protein, putative [Arthroderma benhamiae CBS 112371]
gi|291179419|gb|EFE35206.1| DNA repair protein, putative [Arthroderma benhamiae CBS 112371]
Length = 751
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 31/107 (28%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERA--------------- 130
+ V DANHCPG SVM L GD +LYTGD R +A+ +A
Sbjct: 41 IRVTLFDANHCPG----SVMFLIEGDGKAILYTGDIRGKATITQAYRLYSRSVFLLTVSL 96
Query: 131 -------EIGRNTLV--KALKDDVVDILYLDNTYCNSS---YAFPSR 165
+ RN ++ + D +D +YLD T+ S FPS+
Sbjct: 97 AESWWVQSLIRNPVLIPYTMGDRRLDTIYLDTTFATKSDIHQVFPSK 143
>gi|282896420|ref|ZP_06304441.1| Beta-lactamase-like protein [Raphidiopsis brookii D9]
gi|281198708|gb|EFA73588.1| Beta-lactamase-like protein [Raphidiopsis brookii D9]
Length = 538
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 7 SVDRWTEGSQVYFLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGLDLSLIR 63
S+ + + + ++H H DH +GL S A+ P++ S +T+KL PL + L +
Sbjct: 41 SITKKNSPADLVLISHAHPDHCRGLLSLNRAFPLLPIYTSEVTSKLLPLNWTELGAA--- 97
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG---DFGCLLYTGD 120
+I ++ + SP ++ V V A H PG +++L ++ D+ LLYTGD
Sbjct: 98 -ENITFCQALPLRSPVEVQEGLV-VELFPAGHLPG--AVAILLTYQSPERDYK-LLYTGD 152
Query: 121 FRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
F SN R G ++ L+ +D+L ++ +Y S + P R QI
Sbjct: 153 FF--LSNSRLVDGLR--LEELRGLNLDVLLIEGSYGTSRH--PHRRHQENQI 198
>gi|114707385|ref|ZP_01440282.1| metallo-beta-lactamase family protein [Fulvimarina pelagi HTCC2506]
gi|114537266|gb|EAU40393.1| metallo-beta-lactamase family protein [Fulvimarina pelagi HTCC2506]
Length = 549
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 77/194 (39%), Gaps = 25/194 (12%)
Query: 20 LTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLK---FPGLDLSLIRVLDIGSWHSIS 74
+TH H DH L W R P++ + TA L K PG + V G I
Sbjct: 68 ITHAHEDHYGALLDLWPRLKAPVYATEFTAGLLAAKREGEPGAPKIPVEVFKAGDRFRIG 127
Query: 75 VVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGR 134
E+ AI+ H + V L R D G +L+TGD++ +A+ E
Sbjct: 128 PF----------EIEAINVTHS---IPDPVALAIRTDAGTVLHTGDWKIDATPVLGEPTD 174
Query: 135 NTLVKALKDDVVDILYLDNTYCNSSYAFPSR-EVAAQQIWVWPERLQTMHLLGFHDIFTT 193
++ + D+ V L D+T PS EVAA + M + T
Sbjct: 175 EKRLREIGDEGVMTLVCDSTNAMREGESPSEAEVAASLTKI------IMSAKARVAVTTF 228
Query: 194 KTSLTRVRAVPRYS 207
+++ R+R+V R +
Sbjct: 229 SSNVGRIRSVARAA 242
>gi|392566098|gb|EIW59274.1| hypothetical protein TRAVEDRAFT_36726 [Trametes versicolor
FP-101664 SS1]
Length = 983
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 92/238 (38%), Gaps = 74/238 (31%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLD-----IGSWH 71
+Y LTH H+DH GL++ + CS AK L+ +R +D + S+
Sbjct: 39 LYLLTHTHTDHLNGLAARSFGQTVVCSH-DAKEMLLRHEVYAERALRDMDLRAQNVRSYA 97
Query: 72 SISV--------------------VSPSSGEKTF-------VEVIAIDANHCPGILGCSV 104
+ + +P + F V + +DANHC G +V
Sbjct: 98 HLKIDPQRMEDGSLNRAGSRDLLRATPLHAPEEFRLNDGQAVTITLLDANHCLG----AV 153
Query: 105 MLLFRGDFGCLLYTGDFRWEA------------------------SNERAEIGRNTLVKA 140
M L GD G +L+TGD R E SN R R+T++
Sbjct: 154 MFLVEGDKGAVLHTGDLRAEPWFLNSLRHNPYIQRYLDTSSASPLSNHR-NSSRSTVLPK 212
Query: 141 LKDDVVDILYLDNTYCNSSYAFPSREVAA----QQIWVWPERLQ---TMHLLGFHDIF 191
L + +YLD ++Y P++ AA + + ++PE + LG+ DI+
Sbjct: 213 L-----EAIYLDTACLLNTYDVPNKADAAGGLTELMALYPETTRFFINAWTLGYEDIY 265
>gi|49117767|gb|AAH72667.1| Dclre1a protein [Mus musculus]
Length = 782
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GLS + R P++CS +T L K + IR L + +
Sbjct: 712 EGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEITGNLLKKKL-RVQEQYIRQLPMDTECV 769
Query: 73 ISVVSPSSGEKTFVEVIAIDANH 95
+ V+V+ +DAN
Sbjct: 770 VDS----------VKVVLLDANQ 782
>gi|310800610|gb|EFQ35503.1| artemis protein [Glomerella graminicola M1.001]
Length = 629
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 30/157 (19%)
Query: 19 FLTHLHSDHTQGLSSAWARGP-LFCSRLTAKL------FPLKFPGLDLSLIRVLDIGSWH 71
FL+H+HSDH GL + R P ++CS T ++ +P + ++ H
Sbjct: 32 FLSHIHSDHLAGLETL--RSPFVYCSAATREMLLRLERYPCRL-NYAKGILEARVQTYKH 88
Query: 72 SISVVSPSSGEKT---------FVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFR 122
+++ P E T ++V DANHCPG +VM L +LYTGD R
Sbjct: 89 LKNLLKPLPLETTTTLELAPGIHIQVTLFDANHCPG----AVMFLIEDSNRAILYTGDIR 144
Query: 123 WEASNERAEIGRNTLV----KALKDDVVDILYLDNTY 155
E + I RN V LK +D +YLD ++
Sbjct: 145 SEPWFVNS-IARNPAVIEYTSGLK--TLDKIYLDTSF 178
>gi|75911076|ref|YP_325372.1| beta-lactamase-like protein [Anabaena variabilis ATCC 29413]
gi|75704801|gb|ABA24477.1| Beta-lactamase-like protein [Anabaena variabilis ATCC 29413]
Length = 555
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 15 SQVYFLTHLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+ + +TH H DH +G L A+ P++ S +T+KL PL + LD + + + H
Sbjct: 74 ADLVLVTHAHPDHARGLLALHQAFPNLPIYGSEVTSKLLPLNW--LDRNPQEIPQL--CH 129
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--LLYTGDFRWEASNER 129
++ + SP + V I A H PG +++L + + LLYTGDF SN R
Sbjct: 130 ALPLRSPVELQDGLVAEI-FPAGHLPG--AVAILLTYTTEHRSYKLLYTGDFFL--SNSR 184
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
G ++ L+ +++L ++ TY S + P R Q+
Sbjct: 185 LVEGLR--LEELRGIDLNVLIIEGTYGTSRH--PHRRNQENQL 223
>gi|119189777|ref|XP_001245495.1| hypothetical protein CIMG_04936 [Coccidioides immitis RS]
Length = 704
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDD 144
+ V +ANHCPG +VM L G+ +LYTGD R E + I L+ L D
Sbjct: 41 IRVTLFNANHCPG----AVMFLIEGNGKAILYTGDVRAEPWWVESLIRNPILIPYTLGDC 96
Query: 145 VVDILYLDNTYCNSS---YAFPSREVAAQQIW----VWPE 177
+D +YLD T+ S AFPS+ +++ +PE
Sbjct: 97 RLDRIYLDTTFAIKSDIYSAFPSKAEGIKELLHKVKAYPE 136
>gi|323508153|emb|CBQ68024.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1239
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 44/148 (29%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL--------------- 61
+Y LTH+H+DH +GL P++CS T +L LK+ +
Sbjct: 65 LYLLTHIHTDHLKGLDRPGITAPIYCSTATKQLL-LKYERQKTRIEKDRDGVHTKNVGVV 123
Query: 62 -----IRVLD----------------IGSWHSISVVSPSSGEKT---FVEVIAIDANHCP 97
+RV D + H++ P+ + T V + I++NH
Sbjct: 124 RPYAHLRVTDDHATAKAKLSGFQANSLDLLHALPFNVPTKVQYTPTSSVTLTLIESNHMF 183
Query: 98 GILGCSVMLLFRGDFGCLLYTGDFRWEA 125
G M L +GD G +L+TGD R EA
Sbjct: 184 G----GAMFLIQGDKGAVLHTGDLRAEA 207
>gi|428180388|gb|EKX49255.1| hypothetical protein GUITHDRAFT_104783 [Guillardia theta CCMP2712]
Length = 420
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 19/84 (22%)
Query: 83 KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAE----IGRNTLV 138
K + ++AI+ANH PG SVM G FG L++GDFR++ E +GR
Sbjct: 12 KVALSIVAINANHTPG----SVMFHVSGGFGNRLHSGDFRYDPKIHTTENFPCLGR---- 63
Query: 139 KALKDDVVDILYLDNTYCNSSYAF 162
VD LYLD T + S++F
Sbjct: 64 -------VDELYLDTTLFHPSWSF 80
>gi|312087002|ref|XP_003145298.1| hypothetical protein LOAG_09723 [Loa loa]
Length = 567
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 117/315 (37%), Gaps = 94/315 (29%)
Query: 49 LFPLKFPGLDLSLIRVLDI-GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLL 107
+ P K GL + +D+ G+ + S + ++ANH PG SVML+
Sbjct: 2 ILPTKQAGLVIDNFIAIDLFGTNPDVKYCFLSGANPYHCHKLTVNANHAPG----SVMLI 57
Query: 108 FRGD----FGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCN-SSYAF 162
G+ G +LYTG FR + + I + AL++ D++ +D+ Y + + +
Sbjct: 58 IEGEHRTTLGRILYTGFFRADTRFYQNVIA----LSALQEKKFDVICIDSNYVDFTREEY 113
Query: 163 PSREVAAQQ---------------------------------------IWVWPERLQTMH 183
P+R +A++ IW+ PER +
Sbjct: 114 PNRRSSAKEAANLLRILKYNGVDNVAIPVPIIGCESFLVNISRELKCKIWLHPERFEIAQ 173
Query: 184 LLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSL 243
+LG D F+ T + + I++ E L+T I I S P+V+ + G
Sbjct: 174 ILGIDDYFSETKGDTYIWTCSQ----IESREVLSTTDSHI-IRISMAPYVMPNISLNG-- 226
Query: 244 PGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQP 303
+R H + YSDH E+ FL+L+
Sbjct: 227 ------------------------------EREH----VIQYSDHCSSGELRSFLSLLTF 252
Query: 304 SNIRGIVSSSSCYVD 318
S I I ++SS V+
Sbjct: 253 SRITAISNNSSLLVE 267
>gi|255940940|ref|XP_002561239.1| Pc16g09210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585862|emb|CAP93591.1| Pc16g09210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 677
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDD 144
++V DANHC G +VM L GD ++YTGD R E + + L+ L
Sbjct: 64 IKVTLFDANHCTG----AVMFLIEGDGKAIIYTGDIRAETWWVSSLVRHPVLIPYTLGQK 119
Query: 145 VVDILYLDNTYC---NSSYAFPSREVA----AQQIWVWPE 177
+D LYLD+T+ N FPS+ Q+I +P+
Sbjct: 120 RLDKLYLDSTFASKTNPFREFPSKAEGLSELLQKIQAYPD 159
>gi|358372094|dbj|GAA88699.1| DNA repair protein [Aspergillus kawachii IFO 4308]
Length = 737
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDD 144
+ V DANHC G +VM L G+ +LYTGD R E + I LV L
Sbjct: 52 IRVTLFDANHCTG----AVMFLIEGNGKAILYTGDIRAEPWWVNSIIRNPVLVPYTLGIK 107
Query: 145 VVDILYLDNTYCNSS---YAFPSREVAAQQI 172
+D +Y+DNT+ S + FPS+ +++
Sbjct: 108 QLDNIYIDNTFARPSHVCHTFPSKAEGLKEL 138
>gi|299746247|ref|XP_001837843.2| hypothetical protein CC1G_09825 [Coprinopsis cinerea okayama7#130]
gi|298406968|gb|EAU83943.2| hypothetical protein CC1G_09825 [Coprinopsis cinerea okayama7#130]
Length = 876
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 43/156 (27%)
Query: 6 ISVDRWTEGSQ----VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF-------PLKF 54
I VD ++ Q ++ LTH HSDH GL++ ++CS ++ ++
Sbjct: 16 IRVDDFSSNVQPAPLLHLLTHTHSDHINGLAARSFGYNVYCSEDAKQMLLRHEVYAEREY 75
Query: 55 PGLDLSLIRV--------------------------LDIGSWHSISVVSPSSGEKTFVEV 88
DL ++ L H + + + E V +
Sbjct: 76 HEKDLRAEKIRTFSHLKVDPLVHADGTLYYQGSRDLLKTLPLHKPTRMDLDANES--VTI 133
Query: 89 IAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
+DANHCPG +VM L G G +L+TGDFR E
Sbjct: 134 TLLDANHCPG----AVMFLIEGPRGAVLHTGDFRAE 165
>gi|222148290|ref|YP_002549247.1| metal dependent hydrolase [Agrobacterium vitis S4]
gi|221735278|gb|ACM36241.1| metal dependent hydrolase [Agrobacterium vitis S4]
Length = 555
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 17/194 (8%)
Query: 16 QVYFLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
+ F+TH H DH GL+ W P++ S TA + K R + G+ I
Sbjct: 70 KAIFITHAHEDHYGGLNDIWPGLNVPVYASGFTAGMLEAK---------RNYE-GTRAEI 119
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIG 133
V G+K V ++A+ + + L+ R G +++TGD++ + + +
Sbjct: 120 PVTPFKPGDKVHVGPFVVEASDVNHSIPEPMSLIIRTPLGNVIHTGDWKIDHAPSLGPLT 179
Query: 134 RNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIFTT 193
+AL D+ V + D+T PS + ++ + + +QT G I T
Sbjct: 180 DEARFRALGDEGVLAVMCDSTNAMREGVSPSEQEVSEGLR---KIIQTAE--GRVAITTF 234
Query: 194 KTSLTRVRAVPRYS 207
+++ R+R++ + +
Sbjct: 235 SSNVGRIRSIAKAA 248
>gi|443896508|dbj|GAC73852.1| hypothetical protein PANT_9d00301 [Pseudozyma antarctica T-34]
Length = 1256
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 44/147 (29%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
+Y LTH+H+DH +GL P++CS T +L L++ + + D + S+SVV
Sbjct: 66 LYLLTHIHTDHLKGLDRPGITAPIYCSATTKQLL-LRYERQKTRIEKDRDAQAGKSLSVV 124
Query: 77 SPSSGEK---------------------------------------TFVEVIAIDANHCP 97
P + + + V + I++NH
Sbjct: 125 RPYAHLRVTTDHAAARSKLSGYHASSVDLLHPLPYNVPTKVPYTPTSTVTLTLIESNHMF 184
Query: 98 GILGCSVMLLFRGDFGCLLYTGDFRWE 124
G M L +G G +L+TGD R E
Sbjct: 185 G----GTMFLIQGSNGAVLHTGDMRAE 207
>gi|119511400|ref|ZP_01630512.1| Beta-lactamase-like protein [Nodularia spumigena CCY9414]
gi|119463945|gb|EAW44870.1| Beta-lactamase-like protein [Nodularia spumigena CCY9414]
Length = 601
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Query: 15 SQVYFLTHLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+ V ++H H DH +G L + P++ S +T+KL PL + D I L H
Sbjct: 117 ADVVLVSHAHPDHARGLLDLHHTFPLLPIYASEVTSKLLPLNWLDQDPQKISQL----CH 172
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAE 131
++ + SP ++ V V A H PG + + LLYTGDF SN R
Sbjct: 173 ALPLRSPVEIQEGLV-VELFPAGHLPGAVAILLTYTTAERSYKLLYTGDFF--LSNSRLV 229
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
G ++ L+ +++L ++ TY S + P R Q+
Sbjct: 230 EGLR--LEELRGLELNVLIIEGTYGTSRH--PHRRHQENQL 266
>gi|408379504|ref|ZP_11177098.1| metal dependent hydrolase [Agrobacterium albertimagni AOL15]
gi|407746988|gb|EKF58510.1| metal dependent hydrolase [Agrobacterium albertimagni AOL15]
Length = 555
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 31/230 (13%)
Query: 19 FLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
+TH H DH L+ W P++ SR TA + K R + GS I +
Sbjct: 73 IITHAHEDHYGALNDLWPGLNVPVYASRFTAGMLEAK---------RDYE-GSRAEIPIT 122
Query: 77 SPSSGEKTFV---EVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIG 133
G++ V E+ AI NH + + L+ R G L++TGD++ + + +
Sbjct: 123 PFKQGDRINVGPFEIEAIGVNHS---IPEPMSLVIRTPLGNLIHTGDWKIDHNPSLGPLT 179
Query: 134 RNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIFTT 193
+A+ D+ V ++ D+T PS E + + E + G I T
Sbjct: 180 DEDRFRAVGDEGVLAMFCDSTNAMRDGVSPSEEEVSAGLQKIIEAAE-----GRVAITTF 234
Query: 194 KTSLTRVRAVPRYSFSI--------DTLESLNTMHPTIGIMPSGLPWVVK 235
+++ R+R++ + + + +L+ + + IGIM P++ +
Sbjct: 235 SSNVGRIRSIAQAAEAAGREVLLLGSSLKRVTNVAQDIGIMEGIKPFLAE 284
>gi|353238213|emb|CCA70166.1| hypothetical protein PIIN_04105 [Piriformospora indica DSM 11827]
Length = 741
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
V + AIDANHCPG +VM L G G +L+TGD R E
Sbjct: 133 VRITAIDANHCPG----AVMFLVEGPAGAVLHTGDVRAE 167
>gi|425772924|gb|EKV11304.1| DNA repair protein, putative [Penicillium digitatum PHI26]
gi|425782106|gb|EKV20035.1| DNA repair protein, putative [Penicillium digitatum Pd1]
Length = 666
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDD 144
++V DANHC G +VM L GD ++YTGD R E + + L+ L
Sbjct: 54 IKVTLFDANHCTG----AVMFLIEGDGKAIIYTGDIRAETWWVSSLVRHPVLIPYTLGPK 109
Query: 145 VVDILYLDNTYC---NSSYAFPSREVA----AQQIWVWPE 177
+D LYLD+T+ N FPS+ Q++ +P+
Sbjct: 110 RLDKLYLDSTFASKTNPFREFPSKAEGLSELLQKVQAYPD 149
>gi|257060686|ref|YP_003138574.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC 8802]
gi|256590852|gb|ACV01739.1| beta-lactamase domain protein [Cyanothece sp. PCC 8802]
Length = 549
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 17 VYFLTHLHSDHTQGL---SSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
+ F +H H+DH +GL A+ P++ S +TA+L PL +P S W S
Sbjct: 62 MVFCSHAHADHARGLLALHQAFRDLPIYASEVTAQLLPLNWPKEPSSETSFCQPLKWRSP 121
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--LLYTGDFRWEASNERAE 131
+ E VE+ A H PG +++L ++ LLYTGDF S +
Sbjct: 122 LEID----ENLTVELFR--AGHLPG--ASAILLSYQTPQRTYKLLYTGDF----SLSNLQ 169
Query: 132 IGRNTLVKALKDDVVDILYLDNTY 155
+ V+AL+ DIL ++ +Y
Sbjct: 170 LVEGLSVEALRGLSPDILIIEGSY 193
>gi|395330876|gb|EJF63258.1| hypothetical protein DICSQDRAFT_160484 [Dichomitus squalens
LYAD-421 SS1]
Length = 1105
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 74/202 (36%), Gaps = 57/202 (28%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF---------PLKFPGLDLSLIRV- 64
+ +Y LTH H+DH GLS+ + CS ++ L+ L +R
Sbjct: 38 ANLYLLTHTHTDHLIGLSARSFAQTVVCSHDAKEMLLRHQVYAERALRDAELRAENVRAF 97
Query: 65 ---------LDIGS---------WHSISVVSPSS---GEKTFVEVIAIDANHCPGILGCS 103
+D GS + + P+ + V + +DANHCPG +
Sbjct: 98 SHLRVEPQRMDDGSVDYAGSRDLLRATHIHLPTRFILNNEEDVTITLLDANHCPG----A 153
Query: 104 VMLLFRGDFGCLLYTGDFRWE----------------ASNERAEIGRNTLVKALKDDVVD 147
VM L G G +L+TGD R E N R+ + L +D
Sbjct: 154 VMFLVEGAKGTVLHTGDLRAEPLFLENLKRNPYIQRYVHNPRSSSSAHVL------STLD 207
Query: 148 ILYLDNTYCNSSYAFPSREVAA 169
+YLD + Y P + AA
Sbjct: 208 AIYLDTACLLNDYEVPPKVEAA 229
>gi|218247991|ref|YP_002373362.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC 8801]
gi|218168469|gb|ACK67206.1| beta-lactamase domain protein [Cyanothece sp. PCC 8801]
Length = 549
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 17 VYFLTHLHSDHTQGL---SSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
+ F +H H+DH +GL A+ P++ S +TA+L PL +P S W S
Sbjct: 62 MVFCSHAHADHARGLLALHQAFRDLPIYASEVTAQLLPLNWPKEPSSETSFCQPLKWRSP 121
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--LLYTGDFRWEASNERAE 131
+ E VE+ A H PG +++L ++ LLYTGDF S +
Sbjct: 122 LEID----ENLTVELFR--AGHLPG--ASAILLSYQTPQRTYKLLYTGDF----SLSNLQ 169
Query: 132 IGRNTLVKALKDDVVDILYLDNTY 155
+ V+AL+ DIL ++ +Y
Sbjct: 170 LVEGLSVEALRGLSPDILIIEGSY 193
>gi|302652334|ref|XP_003018020.1| DNA repair protein [Trichophyton verrucosum HKI 0517]
gi|291181619|gb|EFE37375.1| DNA repair protein [Trichophyton verrucosum HKI 0517]
Length = 193
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 31/114 (27%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERA--------------- 130
++V DANHCPG SVM L GD +LYTGD R +A+ ++
Sbjct: 41 IKVTLFDANHCPG----SVMFLVEGDGKAILYTGDIRGKATITQSYKHDSRSVFLLTISL 96
Query: 131 -------EIGRNTLV--KALKDDVVDILYLDNTYCNSS---YAFPSREVAAQQI 172
+ RN ++ + D +D +Y D T+ S FPS+ +++
Sbjct: 97 AESWWVQSLIRNPVLIPYTMGDRRLDTIYFDTTFATKSDIHQVFPSKAEGIREL 150
>gi|119496867|ref|XP_001265207.1| hypothetical protein NFIA_020180 [Neosartorya fischeri NRRL 181]
gi|119413369|gb|EAW23310.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 690
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDD 144
+ V +DANHC G +VM L GD +LYTGD R E + + L+ L
Sbjct: 41 IRVTLLDANHCAG----AVMFLIEGDGKAVLYTGDIRAERWWVDSLVRHPVLIPYTLGSK 96
Query: 145 VVDILYLDNTYCNSSY---AFPSREVA----AQQIWVWPERLQTMH-----LLGFHDIFT 192
+D +YLD T+ ++ +FPS+ Q++ +P+ +T+ G+ D++
Sbjct: 97 KLDRIYLDTTFARINHVCRSFPSKAEGLRELLQKVEAYPK--ETVFYFRAWTFGYEDVWI 154
Query: 193 TKTSLTRVRA-VPRYSFSI 210
++L + V RY +
Sbjct: 155 ALSALLNTKVHVDRYQIGL 173
>gi|17230712|ref|NP_487260.1| hypothetical protein all3220 [Nostoc sp. PCC 7120]
gi|17132315|dbj|BAB74919.1| all3220 [Nostoc sp. PCC 7120]
Length = 555
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 15 SQVYFLTHLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+ + +TH H DH +G L A+ P++ S +T+KL PL + LD + + + H
Sbjct: 74 ADLVLVTHAHPDHARGLLALHQAFPNLPIYGSEVTSKLLPLNW--LDHNPQEIPQL--CH 129
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAE 131
++ + SP + V I H PG + + LLYTGDF SN R
Sbjct: 130 ALPLRSPVELQDGLVAEI-FPCGHLPGAVAILLTYTTEQRSYKLLYTGDFFL--SNSRLV 186
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
G ++ L+ +++L ++ TY S + P R Q+
Sbjct: 187 EGLR--LEELRGIDLNVLIIEGTYGTSRH--PHRRNQENQL 223
>gi|158254628|dbj|BAF83287.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 10/66 (15%)
Query: 105 MLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-Y 160
M LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y
Sbjct: 1 MFLFQGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFY 54
Query: 161 AFPSRE 166
PSRE
Sbjct: 55 QIPSRE 60
>gi|428219041|ref|YP_007103506.1| beta-lactamase [Pseudanabaena sp. PCC 7367]
gi|427990823|gb|AFY71078.1| beta-lactamase domain protein [Pseudanabaena sp. PCC 7367]
Length = 673
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 29/193 (15%)
Query: 21 THLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+H H+DH +G L P++ S +TA+L PL +P L + W ++
Sbjct: 56 SHAHADHARGIRQLHELLPELPIYTSEITARLLPLLWPDQPQELASLCLPLPWEKTRQIA 115
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTL 137
P +++++ A H PG ++ L +LYTGDF SN R G
Sbjct: 116 PD----LYIQILP--AGHLPGAACFAIRYLTAEREYRVLYTGDFF--LSNSRLVDG--LP 165
Query: 138 VKALKDDVVDILYLDNTYCNSSY-----------AFPSREVAAQQIWVWP-ERL----QT 181
++A ++ D+L ++ T Y A SRE+AA + + P +L +
Sbjct: 166 LEAFREQSPDVLIIEGTLGAKRYPHRRSQENELAAKLSRELAAGKSAIVPVPKLGVAQEI 225
Query: 182 MHLLGFHDIFTTK 194
+ LL H FT K
Sbjct: 226 LMLLRSHHNFTGK 238
>gi|21427582|gb|AAM53255.1| Athabascan SCID transcript variant 1 [Homo sapiens]
gi|21427584|gb|AAM53256.1| Athabascan SCID transcript variant 2 [Homo sapiens]
gi|21427590|gb|AAM53259.1| Athabascan SCID transcript variant 5 [Homo sapiens]
gi|21427592|gb|AAM53260.1| Athabascan SCID transcript variant 6 [Homo sapiens]
Length = 572
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 10/66 (15%)
Query: 105 MLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-Y 160
M LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y
Sbjct: 1 MFLFQGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFY 54
Query: 161 AFPSRE 166
PSRE
Sbjct: 55 QIPSRE 60
>gi|193785702|dbj|BAG51137.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 10/66 (15%)
Query: 105 MLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-Y 160
M LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y
Sbjct: 1 MFLFQGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFY 54
Query: 161 AFPSRE 166
PSRE
Sbjct: 55 QIPSRE 60
>gi|397470398|ref|XP_003806809.1| PREDICTED: protein artemis [Pan paniscus]
Length = 572
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 10/66 (15%)
Query: 105 MLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-Y 160
M LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y
Sbjct: 1 MFLFQGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFY 54
Query: 161 AFPSRE 166
PSRE
Sbjct: 55 QIPSRE 60
>gi|391337548|ref|XP_003743129.1| PREDICTED: protein artemis-like [Metaseiulus occidentalis]
Length = 436
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 85/196 (43%), Gaps = 33/196 (16%)
Query: 6 ISVDRWTEGSQV--YFLTHLHSDHTQGLSSAWARG-------PLFCSRLTAKLF--PLKF 54
+ +DR+ + + YFL+H HSDH G+ + ++ S LT ++ KF
Sbjct: 14 LMIDRFEDDPDIRAYFLSHDHSDHQYGIDDPDLQSYIIKDSLKIYASPLTVRMLRNRRKF 73
Query: 55 PGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGD--- 111
L L + H I + S S V V A H G SVM +F +
Sbjct: 74 EELH-DAFHPLPLDVPHKIVIGSSESAYP--VTVTLTSAEHIVG----SVMFVFERETPK 126
Query: 112 FGCLLYTGDFRWEASNERAEIGRN-TLVKALKDDVVDILYLDNTYCNSS--YAFPSREVA 168
F C LYTGDFR S + ++ R L + LK D +Y D+T+C + P+RE
Sbjct: 127 FRC-LYTGDFRL--SKQDLKLKRCFKLHRGLK--PFDAIYFDSTWCTPKNLWNIPTRE-- 179
Query: 169 AQQIWVWPERLQTMHL 184
++ + E L HL
Sbjct: 180 --EVLRYVEPLVNTHL 193
>gi|76496499|ref|NP_001029029.1| protein artemis isoform d [Homo sapiens]
gi|76496501|ref|NP_001029030.1| protein artemis isoform c [Homo sapiens]
Length = 572
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 10/66 (15%)
Query: 105 MLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-Y 160
M LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y
Sbjct: 1 MFLFQGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFY 54
Query: 161 AFPSRE 166
PSRE
Sbjct: 55 QIPSRE 60
>gi|327312031|ref|YP_004338928.1| putative mRNA 3-end processing factor [Thermoproteus uzoniensis
768-20]
gi|326948510|gb|AEA13616.1| putative mRNA 3-end processing factor [Thermoproteus uzoniensis
768-20]
Length = 316
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 70/168 (41%), Gaps = 43/168 (25%)
Query: 19 FLTHLHSDH-TQGLSSAWA---RGPLFCSRLTAKLFPLKF----PGLDLSLIRVLDIGSW 70
+TH HSDH T+ + A+A R L R+ + P K+ PG LD+G
Sbjct: 33 LITHGHSDHVTRHVRRAFAVLTRETLQVLRVRYGVRPRKYVLARPG------DRLDLG-- 84
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERA 130
K F+ V+ +A H PG SVM L G + TGDF SN
Sbjct: 85 ------------KFFLHVL--NAGHVPG----SVMYLIESRDGTVGLTGDFNPAGSN--- 123
Query: 131 EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPER 178
+V+ D+L ++ TY + Y FP RE ++I +R
Sbjct: 124 ------VVRGADAIEADVLVMEATYGSRHYVFPPRERLYEEIAALADR 165
>gi|114629498|ref|XP_001146648.1| PREDICTED: protein artemis isoform 2 [Pan troglodytes]
gi|114629500|ref|XP_001146778.1| PREDICTED: protein artemis isoform 4 [Pan troglodytes]
gi|114629502|ref|XP_001146913.1| PREDICTED: protein artemis isoform 6 [Pan troglodytes]
gi|114629504|ref|XP_001146991.1| PREDICTED: protein artemis isoform 7 [Pan troglodytes]
Length = 572
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 10/66 (15%)
Query: 105 MLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-Y 160
M LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y
Sbjct: 1 MFLFQGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFY 54
Query: 161 AFPSRE 166
PSRE
Sbjct: 55 QIPSRE 60
>gi|146278025|ref|YP_001168184.1| beta-lactamase domain-containing protein [Rhodobacter sphaeroides
ATCC 17025]
gi|145556266|gb|ABP70879.1| beta-lactamase domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 557
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 23/166 (13%)
Query: 16 QVYFLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
+ F+TH H DH L W R P++ R T + LKF L + R+ +G+ +
Sbjct: 70 EAIFITHAHEDHIGALGHLWPRLKAPVYARRFTGTIGRLKFEEHGLPVDRINIVGARPEV 129
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFR----------W 123
P EV + +H + S L+ G ++++GDF+ W
Sbjct: 130 VEAGP-------FEVQFVPVSHS---IPESSALVIDTPAGRIVHSGDFKLDRSPVVGEPW 179
Query: 124 EASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAA 169
RA I VKAL D ++ L ++ A P R + A
Sbjct: 180 ADETFRA-IAAERPVKALMCDSTNVFSLHPGRSEATLADPLRALIA 224
>gi|195343677|ref|XP_002038422.1| GM10813 [Drosophila sechellia]
gi|194133443|gb|EDW54959.1| GM10813 [Drosophila sechellia]
Length = 1332
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 96 CPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNT 154
CPG L M F+ G C+L+TGDFR A E I N +D+LYLD T
Sbjct: 926 CPGAL----MFFFKLSSGECILHTGDFRASADMESLPIFWN-------HSNIDLLYLDTT 974
Query: 155 YCNSSYAF 162
Y N +Y F
Sbjct: 975 YMNKNYDF 982
>gi|374326702|ref|YP_005084902.1| putative mRNA 3-end processing factor [Pyrobaculum sp. 1860]
gi|356641971|gb|AET32650.1| putative mRNA 3-end processing factor [Pyrobaculum sp. 1860]
Length = 324
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 114/293 (38%), Gaps = 57/293 (19%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLI-----RVLDIGSWHSI 73
+TH HSDH +S R + +R T ++F GL + VL++G+
Sbjct: 44 LVTHGHSDH---VSRYVYRHLVVATRETFAAMSVRFGGLPPRRVVTAPGAVLELGN---- 96
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEAS--NERAE 131
V++ ++A H ILG SVM + D +L TGDF S + AE
Sbjct: 97 ------------VQIAVLEAGH---ILG-SVMYMAEVDGLQILITGDFNTSGSIITDGAE 140
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIF 191
+ +D+L ++ TY + +Y FP+R ++ ER L+G +
Sbjct: 141 ----------PFEKLDVLVMEATYGDPAYVFPNRAEVYNELMDVVER-----LVGEGGVA 185
Query: 192 TTKTSLTRVRAVPR-YSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSS 250
+ L + + V + S+ + +GI P+G V + P F
Sbjct: 186 ISAYPLGKAQEVAALFGRRAGAHSSVARYNKALGI-PTGSVTDVLIVPNLRMAPPGYFKV 244
Query: 251 YQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQP 303
S W T K EA G ++ +P SDHS F + EF P
Sbjct: 245 EVSGWYVD--EATRKNAEAAG--------VHGIPLSDHSDFPSLVEFATEASP 287
>gi|113477523|ref|YP_723584.1| beta-lactamase-like protein [Trichodesmium erythraeum IMS101]
gi|110168571|gb|ABG53111.1| beta-lactamase-like [Trichodesmium erythraeum IMS101]
Length = 539
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 15 SQVYFLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS-- 69
+ + +H HSDH QGL + ++ P++ S T KL PL +P +L++ V D
Sbjct: 51 ADIVLCSHAHSDHAQGLLALHRSFPDLPIYASEATTKLLPLNWP--ELTICEVPDFCQPL 108
Query: 70 -WHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNE 128
WH S + SG + V A H PG + LLYTGDF
Sbjct: 109 PWH--SPIELCSG----LTVELFPAGHLPGATAFLLTYTQGNRTYKLLYTGDFFL----S 158
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSY 160
++ + + L+ +D+L ++ +Y + Y
Sbjct: 159 KSRLVEGLPLAYLRGLKLDVLIVEGSYGTAHY 190
>gi|428304638|ref|YP_007141463.1| beta-lactamase [Crinalium epipsammum PCC 9333]
gi|428246173|gb|AFZ11953.1| beta-lactamase domain protein [Crinalium epipsammum PCC 9333]
Length = 565
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 15 SQVYFLTHLHSDHTQGL---SSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+ + +H HSDH +GL A+ + P++ S +T++L PL + + + + SW
Sbjct: 60 ADLVLCSHAHSDHAKGLLALHQAFPKLPIYASDVTSQLLPLNWSDRESEIPQFCQALSWR 119
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG--CLLYTGDFRWEASNER 129
S + F + H PG +++L + G + +LYTGDF SN R
Sbjct: 120 SPVEFQDGLCAELF------PSGHLPG--AAAILLTYTGLYRSYTILYTGDFFL--SNSR 169
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
G + AL+ D+L ++ +Y + + P R Q+
Sbjct: 170 LVEGLP--IDALRTVEPDVLIIEGSYGTARH--PHRRQQENQL 208
>gi|427724683|ref|YP_007071960.1| metallo-beta-lactamase domain-containing protein [Leptolyngbya sp.
PCC 7376]
gi|427356403|gb|AFY39126.1| metallo-beta-lactamase domain-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 557
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 29/209 (13%)
Query: 19 FLTHLHSDHTQGL---SSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
F +H H DH +GL + P++ S T L PL + G LSL V + W S +
Sbjct: 69 FCSHAHRDHAEGLLKLQELFPELPIYASSATKALLPLNWTGQALSLDSV-ETLPWRSPTE 127
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRN 135
++P +E+ A H PG + L L YTGDF S ++
Sbjct: 128 IAPG----LIIELFP--AGHLPGAATALLTLTTEKRDYTLFYTGDF----SVSHFQLVNG 177
Query: 136 TLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIFTTKT 195
V+ L+ D+L ++ +Y + P R QQ E+ T LL + TK
Sbjct: 178 LSVEELRGLKPDVLIIEGSY--GTLRHPHRR---QQ-----EKYFTNRLL---EALETKQ 224
Query: 196 SLTRVRAVPRYSFSIDTLESLNTMHPTIG 224
S+ + VPR + L+ L + H G
Sbjct: 225 SV--ILPVPRLGLGQEILKLLRSHHQFTG 251
>gi|169622121|ref|XP_001804470.1| hypothetical protein SNOG_14275 [Phaeosphaeria nodorum SN15]
gi|160704700|gb|EAT78512.2| hypothetical protein SNOG_14275 [Phaeosphaeria nodorum SN15]
Length = 467
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDD 144
+ V IDANHC G +VM L GD +LYTGD R E + + L+ L
Sbjct: 24 IRVTLIDANHCIG----AVMFLIEGDGQAVLYTGDIRAETWWVNSLVQNPVLLPYTLGKR 79
Query: 145 VVDILYLDNTYCNSSY---AFPSR 165
+D +YLD T+ FPS+
Sbjct: 80 RLDCMYLDTTFATKHEPYREFPSK 103
>gi|449682246|ref|XP_002170873.2| PREDICTED: uncharacterized protein LOC100203671 [Hydra
magnipapillata]
Length = 417
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 5/48 (10%)
Query: 6 ISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKL 49
ISVD ++ G + Y L+H HSDH +GLS ++ G ++CS++TA L
Sbjct: 269 ISVDAFSYGEIPGCKYYLLSHFHSDHYKGLSKKFS-GKVYCSKITANL 315
>gi|302847337|ref|XP_002955203.1| hypothetical protein VOLCADRAFT_96136 [Volvox carteri f.
nagariensis]
gi|300259495|gb|EFJ43722.1| hypothetical protein VOLCADRAFT_96136 [Volvox carteri f.
nagariensis]
Length = 1266
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 29 QGLSSAWARGPLFCSRLTAKLFP--LKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFV 86
+GL+ ++A G + S +TA+L LK P L R L + + + V
Sbjct: 876 KGLTRSFAGGTVLASPVTARLVSERLKLPAARL---RTLPMDTPVEVDGVC--------- 923
Query: 87 EVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVV 146
+ +DANHCPG V+ G + +L+TGD R + RN L
Sbjct: 924 -LTLVDANHCPGA--AMVVAQPPGGWPPVLHTGDCRL------GDHMRNHPAMQLLVGRR 974
Query: 147 DILYLDNTYCNSSYAFPSR 165
L LD TYC+ Y FP +
Sbjct: 975 CTLVLDTTYCDPQYEFPPQ 993
>gi|317129507|ref|YP_004095789.1| RNA-metabolising metallo-beta-lactamase [Bacillus cellulosilyticus
DSM 2522]
gi|315474455|gb|ADU31058.1| RNA-metabolising metallo-beta-lactamase [Bacillus cellulosilyticus
DSM 2522]
Length = 557
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 18/165 (10%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
E + +TH H DH G+ + P+F +R T L LK L ++L
Sbjct: 64 EKVRALIVTHGHEDHIGGIPFFLKKLNVPVFATRFTLGLIELK-----LREHKILRESEL 118
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE---ASN 127
I+ S + K V+ + + P LG ++FR G +++TGDF+++ A N
Sbjct: 119 KEITSASELTFGKVSVDFFKV-THSIPDCLG----MVFRTPEGNVVHTGDFKFDYTPAKN 173
Query: 128 ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
E A+I + L + K+ V+ +L ++T A PS ++ + +
Sbjct: 174 EHADIHK--LAEIGKEGVL-LLLSESTNAERPGATPSEQMVGEHV 215
>gi|307596627|ref|YP_003902944.1| putative mRNA 3-end processing factor [Vulcanisaeta distributa DSM
14429]
gi|307551828|gb|ADN51893.1| putative mRNA 3-end processing factor [Vulcanisaeta distributa DSM
14429]
Length = 338
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 30/161 (18%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSP 78
+TH H DH R + P+ G +++IR D G + VSP
Sbjct: 37 LITHGHRDHVN-------------PRALRNVSPIIMSGETVAIIRARD-GDYLRHIAVSP 82
Query: 79 SSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLY--TGDFRWEASNERAEIGRNT 136
G + + + I++ + ++G +L DFG L TGDF E+S
Sbjct: 83 --GSRLIINDVLIESFNAGHVVGSLSYVL---DFGDLRVGVTGDFNVESS---------I 128
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPE 177
L+ K VD+L ++ TY + Y FPSR ++ E
Sbjct: 129 LLDGAKGLNVDVLIMEATYGDPDYVFPSRHEIYNELMAIAE 169
>gi|444523044|gb|ELV13443.1| DNA cross-link repair 1A protein [Tupaia chinensis]
Length = 342
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKF 54
EG YFLTH HSDH GLS + P++CS +T L K
Sbjct: 171 EGCTAYFLTHFHSDHYAGLSKNFT-CPVYCSEITGNLLKNKL 211
>gi|338721599|ref|XP_003364407.1| PREDICTED: protein artemis isoform 2 [Equus caballus]
Length = 578
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 106 LLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YA 161
LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y
Sbjct: 7 FLFQGNNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IQSVYLDTTFCDPKFYQ 60
Query: 162 FPSRE 166
PSRE
Sbjct: 61 IPSRE 65
>gi|444706050|gb|ELW47413.1| Protein artemis [Tupaia chinensis]
Length = 558
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 106 LLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YA 161
LF+G G +LYTGDFR + E R L+ + +KD ++ +YLD T+C+ Y
Sbjct: 55 FLFQGSNGTVLYTGDFRL----AKGEAARMELLHSGGRVKD--IESVYLDTTFCDPKFYQ 108
Query: 162 FPSRE 166
PSRE
Sbjct: 109 IPSRE 113
>gi|427721121|ref|YP_007069115.1| beta-lactamase [Calothrix sp. PCC 7507]
gi|427353557|gb|AFY36281.1| beta-lactamase domain protein [Calothrix sp. PCC 7507]
Length = 557
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 12 TEGSQVYFLTHLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIG 68
T+ + + ++H H DH +G L+ A+ P++ S +T+KL L + D+ I
Sbjct: 70 TQPADLVLVSHAHPDHARGLLALNQAFPLLPIYASEVTSKLLSLNWLDQDIPEIPQF--- 126
Query: 69 SWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNE 128
++ + SP ++ V + A H PG + + LLYTGDF SN
Sbjct: 127 -CQALPLRSPVEFQEGLVAEL-FPAGHLPGAVAILLTYTTGQRVYKLLYTGDFFL--SNS 182
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSY 160
R G ++ L+ +D+L ++ TY S +
Sbjct: 183 RLVEGLR--LEELRGLQLDVLIIEGTYGTSRH 212
>gi|392585184|gb|EIW74524.1| hypothetical protein CONPUDRAFT_169911 [Coniophora puteana
RWD-64-598 SS2]
Length = 1574
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 43/143 (30%)
Query: 17 VYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLF-------------------------P 51
++ L+H H+DH GLS+ + CS T +
Sbjct: 35 LHLLSHAHADHLVGLSAPSFAHKVICSVDTKAILLRYETYGTRSLYDEGTTAQRSRTFKH 94
Query: 52 LKFP-------GLDLSLIRVLDIGSWHSISVVSPSS---GEKTFVEVIAIDANHCPGILG 101
L+ P D S R L H++ + +P++ G V++ +DANHCPG
Sbjct: 95 LRVPPRVALDGTTDYSHARDL----LHALPLNTPTTFEAGGGEEVQITLLDANHCPG--- 147
Query: 102 CSVMLLFRGDFGCLLYTGDFRWE 124
+VM L G G +L+T D R E
Sbjct: 148 -AVMFLIDGPRGAVLHTSDLRAE 169
>gi|410963230|ref|XP_003988168.1| PREDICTED: protein artemis isoform 2 [Felis catus]
gi|410963232|ref|XP_003988169.1| PREDICTED: protein artemis isoform 3 [Felis catus]
gi|410963234|ref|XP_003988170.1| PREDICTED: protein artemis isoform 4 [Felis catus]
Length = 575
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 106 LLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YA 161
LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y
Sbjct: 7 FLFQGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPKFYQ 60
Query: 162 FPSRE 166
PSRE
Sbjct: 61 IPSRE 65
>gi|126656103|ref|ZP_01727487.1| hypothetical protein CY0110_03434 [Cyanothece sp. CCY0110]
gi|126622383|gb|EAZ93089.1| hypothetical protein CY0110_03434 [Cyanothece sp. CCY0110]
Length = 552
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 19 FLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
F +H HSDH +GL + A+ P++ S +T +L PL +P + S + +
Sbjct: 64 FCSHAHSDHARGLKALHEAFPTIPIYASHVTKQLLPLNWP----------EKNSPKTANF 113
Query: 76 VSPSSGEKTF-----VEVIAIDANHCPGILGCSVMLLFRGDFGC--LLYTGDFRWEASNE 128
EK F + V A H PG S+ L +R LLYTGDF S
Sbjct: 114 CQGLFWEKPFELFDDLTVQLFRAGHLPG--AASISLTYRTVERAYKLLYTGDF----SLS 167
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTY 155
++ ++AL+ DIL ++ TY
Sbjct: 168 NLQLVEGLSIEALRGLSPDILIIEGTY 194
>gi|324521179|gb|ADY47798.1| Protein artemis, partial [Ascaris suum]
Length = 336
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 33/183 (18%)
Query: 6 ISVDRWTEG---SQVYFLTHLH-SDHTQGLSSAWARGPLFCSRLTAKLFP--------LK 53
IS+D + + S+ +FL+H H +D + + + L+C T L LK
Sbjct: 28 ISIDHFGDQNLFSRFFFLSHCHQADDSFYDRLSNQKCFLYCHPTTLILLEAFSQYKRILK 87
Query: 54 FPGLDLSLIRVLDIGSWHSISVVSPS-SGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF 112
+ ++ S ++ + + P+ S ++ IDA HCPG S+M+L D
Sbjct: 88 YIKTEVVGETFHVTNSSNNTTEIQPTKSNSLNAADITFIDAKHCPG----SIMILLEFDR 143
Query: 113 GC-LLYTGDFRWEASNERAEIGRNTLVKALKD-------DVVDILYLDNTYC-NSSYAFP 163
G +LYTGDFR+ + + K L+D +D LY D+T+C S P
Sbjct: 144 GKRVLYTGDFRFVKDDWLS-------CKILRDPENSSTFKRIDELYFDSTFCRRGSEVIP 196
Query: 164 SRE 166
SR+
Sbjct: 197 SRK 199
>gi|148675983|gb|EDL07930.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_c [Mus musculus]
Length = 595
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 100/258 (38%), Gaps = 46/258 (17%)
Query: 105 MLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-Y 160
LF+G G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y
Sbjct: 11 QFLFQGSNGTVLYTGDFRL----AKGEASRMELLHSGGRVKD--IQSVYLDTTFCDPRFY 64
Query: 161 AFPSREVAAQQI------W--------VWPERLQTMHLLGFHDIFTTKTS----LTRVRA 202
PSRE + I W VW L G+ +FT + V
Sbjct: 65 QIPSREQCLRGILELVRSWVTRSPHHVVW---LNCKAAYGYEYLFTNLSEELGVQVHVDK 121
Query: 203 VPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATG--- 259
+ + D L L T T I P + + LP + S ++
Sbjct: 122 LDMFKNMPDILHHLTTDRNT-QIHACRHPKAEECFQ-WNKLPCGITSQNKTALHTISIKP 179
Query: 260 -----GTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314
G +T K + R + Y +S HS F+EI++FL+ + P N+ V
Sbjct: 180 STMWFGERTRK----TNVIVRTGESSYRACFSFHSSFSEIKDFLSYICPVNVYPNVIPVG 235
Query: 315 CYVDPLY-YFGRLCRANQ 331
VD + LCR+ Q
Sbjct: 236 LTVDKVMDVLKPLCRSPQ 253
>gi|354567536|ref|ZP_08986705.1| beta-lactamase domain protein [Fischerella sp. JSC-11]
gi|353542808|gb|EHC12269.1| beta-lactamase domain protein [Fischerella sp. JSC-11]
Length = 556
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 19 FLTHLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
F++H H DH +G L A+ P++ S +T+KL PL + D + ++ +
Sbjct: 78 FVSHAHPDHARGLLKLHQAFPLLPIYASEVTSKLLPLNWLDQDSQELSQF----CQALPL 133
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRN 135
SP + V V A H PG + LLYTGDF SN R G
Sbjct: 134 RSPLEVKDGLV-VELFPAGHLPGAVAILFTYTTPQRTYKLLYTGDFFL--SNSRLVEGLR 190
Query: 136 TLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
++ L+ +D+L ++ TY S + P R Q+
Sbjct: 191 --LEELRGLQLDVLIIEGTYGTSRH--PHRRNQENQL 223
>gi|312382373|gb|EFR27856.1| hypothetical protein AND_04963 [Anopheles darlingi]
Length = 280
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 12/83 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH H+DH GL ++A+ PL S +TA+L F + R++++ H
Sbjct: 210 EGVTHYFLTHFHADHYIGLKKSFAK-PLIMSPITARLVKT-FINVPEEHYRLIEL---HR 264
Query: 73 ISVVSPSSGEKTFVEVIAIDANH 95
V+ VE+IA+DAN
Sbjct: 265 PIVID-------RVEIIALDANQ 280
>gi|434404212|ref|YP_007147097.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Cylindrospermum stagnale PCC 7417]
gi|428258467|gb|AFZ24417.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Cylindrospermum stagnale PCC 7417]
Length = 551
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 15 SQVYFLTHLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW- 70
+ + ++H H DH +G L A+ P++ S +T+KL PL + D +I S+
Sbjct: 69 ADLVLISHAHPDHARGSLALHKAFPLLPIYASEVTSKLLPLNWLDNDPE-----EIPSFC 123
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERA 130
++ + SP + V V A H PG + + LLYTGDF SN R
Sbjct: 124 QALPLRSPVELQDGLV-VELFPAGHLPGAVAILLTYTTPERAYKLLYTGDFFL--SNSRL 180
Query: 131 EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
G ++ L+ +D+L ++ TY S + P R Q+
Sbjct: 181 VEGLR--LEELRGLELDVLIIEGTYGTSRH--PHRRNQENQL 218
>gi|402081919|gb|EJT77064.1| hypothetical protein GGTG_06978 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 615
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNT--LVKALKD 143
+ V DANHC G +VM LF GD ++YTGD R E + A I R+ L +
Sbjct: 78 LRVTLFDANHCTG----AVMFLFEGDGKAVVYTGDIRSEPWHISA-IARSPCLLEYSCGI 132
Query: 144 DVVDILYLDNTYCNSSYAFPSR 165
+D +YLD ++ + ++ FP +
Sbjct: 133 KTLDRIYLDTSFIDDTH-FPPK 153
>gi|158423307|ref|YP_001524599.1| metallo-beta-lactamase family hydrolase [Azorhizobium caulinodans
ORS 571]
gi|158330196|dbj|BAF87681.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Azorhizobium caulinodans ORS 571]
Length = 555
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 80/199 (40%), Gaps = 25/199 (12%)
Query: 19 FLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFP---LKFPGLDLSLIRVLDIGSWHSI 73
LTH H DH + W R P++ +R TA L L+ PG I V+ G I
Sbjct: 73 VLTHGHEDHVGAMLDLWPRIGCPVYTTRFTAALLDAKRLQEPGAPKIPIEVVRSGGRAQI 132
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIG 133
E FV V A+ P S L R G +L+TGD++ + + +
Sbjct: 133 GPF-----EVEFVPV----AHSIPD----SHALAIRTAAGLVLHTGDWKLDPTPVVGHVT 179
Query: 134 RNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIFTT 193
++AL D+ V + D+T PS A + + + FTT
Sbjct: 180 DIARLQALGDEGVRAMICDSTNAIRDGVSPSEADVAATLR------DVVAKAKYRVAFTT 233
Query: 194 -KTSLTRVRAVPRYSFSID 211
+++ RVRA+ +++ D
Sbjct: 234 FSSNVARVRAIAEAAYAND 252
>gi|302890313|ref|XP_003044041.1| hypothetical protein NECHADRAFT_13421 [Nectria haematococca mpVI
77-13-4]
gi|256724960|gb|EEU38328.1| hypothetical protein NECHADRAFT_13421 [Nectria haematococca mpVI
77-13-4]
Length = 476
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFR---WEASNERAEIGRNTLVKALK 142
++V DANHCPG +VM L D +LYTGD R W + LK
Sbjct: 78 IQVTLFDANHCPG----AVMFLIENDTKAILYTGDIRSEPWFVNTMSRNPNLVEYTSGLK 133
Query: 143 DDVVDILYLDNTY 155
+D +YLD ++
Sbjct: 134 --TLDKIYLDTSF 144
>gi|172039432|ref|YP_001805933.1| hypothetical protein cce_4519 [Cyanothece sp. ATCC 51142]
gi|171700886|gb|ACB53867.1| hypothetical protein cce_4519 [Cyanothece sp. ATCC 51142]
Length = 557
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 19 FLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
F +H HSDH +GL + + P++ S +T +L PL +P + S + +
Sbjct: 66 FCSHAHSDHARGLKALHETFPTLPIYASHVTKQLLPLNWP----------EKNSPKTANF 115
Query: 76 VSPSSGEKTF-----VEVIAIDANHCPGILGCSVMLLFRG--DFGCLLYTGDFRWEASNE 128
EK F + V A H PG ++L +R LLYTGDF S
Sbjct: 116 CQGLFWEKPFELFDDLTVQLFRAGHLPG--AACILLTYRTVERVYKLLYTGDF----SLS 169
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
++ ++AL+ DIL ++ TY + P R +Q+
Sbjct: 170 NLQLVEGLSIEALRGLSPDILIIEGTY--GTMRHPHRRQQEKQL 211
>gi|354552303|ref|ZP_08971611.1| beta-lactamase domain protein [Cyanothece sp. ATCC 51472]
gi|353555625|gb|EHC25013.1| beta-lactamase domain protein [Cyanothece sp. ATCC 51472]
Length = 555
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 19 FLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
F +H HSDH +GL + + P++ S +T +L PL +P + S + +
Sbjct: 64 FCSHAHSDHARGLKALHETFPTLPIYASHVTKQLLPLNWP----------EKNSPKTANF 113
Query: 76 VSPSSGEKTF-----VEVIAIDANHCPGILGCSVMLLFRG--DFGCLLYTGDFRWEASNE 128
EK F + V A H PG ++L +R LLYTGDF S
Sbjct: 114 CQGLFWEKPFELFDDLTVQLFRAGHLPG--AACILLTYRTVERVYKLLYTGDF----SLS 167
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
++ ++AL+ DIL ++ TY + P R +Q+
Sbjct: 168 NLQLVEGLSIEALRGLSPDILIIEGTY--GTMRHPHRRQQEKQL 209
>gi|350272095|ref|YP_004883403.1| ribonuclease J [Oscillibacter valericigenes Sjm18-20]
gi|348596937|dbj|BAL00898.1| ribonuclease J [Oscillibacter valericigenes Sjm18-20]
Length = 552
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 12/150 (8%)
Query: 19 FLTHLHSDHTQGLSSAWARG--PLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
F+TH H DH + + P++C+R TA L LK + G S ++
Sbjct: 67 FITHGHEDHIGAIPYVLKQINIPIYCTRFTAGLIKLKLE----------EHGLVKSTKLI 116
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNT 136
+ GE ++ H + SV G +++TGDF+ +++ E+ T
Sbjct: 117 TVEPGETVRAGKFNVEFIHVNHSIADSVAFAIHTHMGAVVHTGDFKIDSTPIDGEVMDLT 176
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
+ L + V L D+T PS +
Sbjct: 177 RLGTLGKEGVLALCADSTNVERPGFTPSEK 206
>gi|283779817|ref|YP_003370572.1| hypothetical protein Psta_2038 [Pirellula staleyi DSM 6068]
gi|283438270|gb|ADB16712.1| conserved hypothetical protein [Pirellula staleyi DSM 6068]
Length = 318
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 61/157 (38%), Gaps = 38/157 (24%)
Query: 19 FLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS---WHSISV 75
F++H HSDH A + LTA L+ ++ L+R L W S+
Sbjct: 27 FISHAHSDHMAAHELA------IGTPLTAALYRRRYGD---KLVRELPFEQPWQWDEFSL 77
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRN 135
+ H G + S ML LLYTGDFR S AE R
Sbjct: 78 -----------------STHPAGHIAGSAMLHVAASDQSLLYTGDFRLRESMT-AETPRC 119
Query: 136 TLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
DIL ++ T+ Y FP RE+A++Q+
Sbjct: 120 PHA--------DILVMECTFGQPHYKFPPRELASEQL 148
>gi|428774664|ref|YP_007166452.1| beta-lactamase [Cyanobacterium stanieri PCC 7202]
gi|428688943|gb|AFZ48803.1| beta-lactamase domain protein [Cyanobacterium stanieri PCC 7202]
Length = 548
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 19 FLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
F TH H DH +GL S + P++ S +T KL PL + D S+I SI
Sbjct: 65 FCTHAHRDHARGLLSLHQIYPHLPIYSSEVTKKLLPLNWLKDDGSMIDPF----CDSIPW 120
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG----CLLYTGDF 121
SP E+ + V A H PG + +LFR G + YTGDF
Sbjct: 121 RSPLQLEED-LSVELYPAGHLPG----AAAILFRYSHGDRVYKIFYTGDF 165
>gi|21427586|gb|AAM53257.1| Athabascan SCID transcript variant 3 [Homo sapiens]
gi|21427588|gb|AAM53258.1| Athabascan SCID transcript variant 4 [Homo sapiens]
Length = 577
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 106 LLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YA 161
LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y
Sbjct: 7 FLFQGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQ 60
Query: 162 FPSRE 166
PSRE
Sbjct: 61 IPSRE 65
>gi|397695773|ref|YP_006533656.1| beta-lactamase domain protein [Pseudomonas putida DOT-T1E]
gi|397332503|gb|AFO48862.1| beta-lactamase domain protein [Pseudomonas putida DOT-T1E]
Length = 477
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 13 EGSQVYFLTHLHSDHT---QGLSSAWARGPLFCSRLTAKLFPLKFPG---LDLS-----L 61
+G Q +TH+H DH L +A RGP+ CS +A+L PL L +S +
Sbjct: 56 QGIQALVITHVHLDHVGRIPALLAAGYRGPILCSEPSARLLPLVLEDAYKLSISSEPAQV 115
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGD-FGCLLYTGD 120
R LD H + V P T VE PG L C + L G G D
Sbjct: 116 ARYLDF--IHDLIVPLPFEQWHTVVEY--------PG-LACRIRLQRAGHLLGSAYVECD 164
Query: 121 FRWEASNER----AEIGR--NTLVKALK-DDVVDILYLDNTYCN 157
+ E +N R ++G N L++ ++ + D+L L++TY +
Sbjct: 165 MQHEHTNTRYVFSGDLGACGNPLLRPVQPPERADVLVLESTYGD 208
>gi|47219683|emb|CAG12605.1| unnamed protein product [Tetraodon nigroviridis]
Length = 250
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHS 72
EG YFLTH HSDH GL+ + P++C+++T L K + I VL + + +
Sbjct: 23 EGITTYFLTHFHSDHYGGLTKN-STLPVYCNKITGNLVRSKLKVAE-QYIHVLPMNTQVA 80
Query: 73 ISVVSPSSGEKTFVEVIAIDANH 95
+ V+ V+ +DANH
Sbjct: 81 VDGVT----------VVLLDANH 93
>gi|76496495|ref|NP_071932.2| protein artemis isoform b [Homo sapiens]
gi|33872940|gb|AAH09185.1| DCLRE1C protein [Homo sapiens]
gi|94717600|gb|ABF47101.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) [Homo
sapiens]
gi|119606654|gb|EAW86248.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_a [Homo sapiens]
gi|119606656|gb|EAW86250.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_a [Homo sapiens]
gi|119606657|gb|EAW86251.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_a [Homo sapiens]
Length = 577
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 106 LLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YA 161
LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y
Sbjct: 7 FLFQGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQ 60
Query: 162 FPSRE 166
PSRE
Sbjct: 61 IPSRE 65
>gi|410458417|ref|ZP_11312176.1| RNA-metabolising metallo-beta-lactamase [Bacillus azotoformans LMG
9581]
gi|409931298|gb|EKN68282.1| RNA-metabolising metallo-beta-lactamase [Bacillus azotoformans LMG
9581]
Length = 557
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
E + +TH H DH G+ + P++ +R T L LK + L+R ++
Sbjct: 64 EKVKALIVTHGHEDHIGGVPYFLKKLKVPVYATRFTLGLIELKLE--EHQLLREAELKEI 121
Query: 71 HSISVVSPSSGEKTFVEVIAIDANH-CPGILGCSVMLLFRGDFGCLLYTGDFRWE---AS 126
+S S +S S +F +V NH P LG ++F G +++TGDF+++ A+
Sbjct: 122 NSNSTLSFSDIRVSFFKV-----NHSIPDCLG----IVFDTPEGKIVHTGDFKFDLTPAN 172
Query: 127 NERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIW 173
NE +EI + + + D V +L ++T PS + +
Sbjct: 173 NEYSEIHK---MADIGRDGVLLLLSESTNAERPGLTPSERIVGDHVL 216
>gi|114629492|ref|XP_001146437.1| PREDICTED: protein artemis isoform 1 [Pan troglodytes]
gi|114629494|ref|XP_001146717.1| PREDICTED: protein artemis isoform 3 [Pan troglodytes]
gi|114629496|ref|XP_001146840.1| PREDICTED: protein artemis isoform 5 [Pan troglodytes]
Length = 577
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 106 LLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YA 161
LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y
Sbjct: 7 FLFQGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDPRFYQ 60
Query: 162 FPSRE 166
PSRE
Sbjct: 61 IPSRE 65
>gi|157825734|ref|YP_001493454.1| hypothetical protein A1C_03300 [Rickettsia akari str. Hartford]
gi|157799692|gb|ABV74946.1| hypothetical protein A1C_03300 [Rickettsia akari str. Hartford]
Length = 560
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 72/150 (48%), Gaps = 14/150 (9%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSL-IRV 64
++++ + LTH H DH G+ W+ + P++ + TA ++ D + I++
Sbjct: 64 IEKYKKDIVGLILTHAHEDHLGGVQYLWSSLKCPIYTTTFTANFLKIRLNEYDFAKNIKI 123
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
++ S IS+ P S +E++ + + P + ++ R D G +L+TGD++++
Sbjct: 124 HEVKSGSKISL-DPFS-----LEMVPL-THSAPEMQA----IMIRTDAGNILHTGDWKFD 172
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNT 154
+ L+K+ D+ V L D+T
Sbjct: 173 NDPVLGQKADEELLKSYGDEGVLALVCDST 202
>gi|238486418|ref|XP_002374447.1| DNA repair protein, putative [Aspergillus flavus NRRL3357]
gi|220699326|gb|EED55665.1| DNA repair protein, putative [Aspergillus flavus NRRL3357]
Length = 738
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDD 144
+ V +DANHC G +VM L G +LYTGD R E+ + I L+ L
Sbjct: 41 IRVTLLDANHCTG----AVMFLIEGSGKSILYTGDIRAESWWVDSLIRHPVLIPYTLGGR 96
Query: 145 VVDILYLDNTYCNSS---YAFPSR 165
+D +YLD+T+ S FPS+
Sbjct: 97 RLDKIYLDSTFARHSSIYRTFPSK 120
>gi|10432603|dbj|BAB13820.1| unnamed protein product [Homo sapiens]
Length = 577
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 106 LLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKA---LKDDVVDILYLDNTYCNSS-YA 161
LF+G+ G +LYTGDFR + E R L+ + +KD + +YLD T+C+ Y
Sbjct: 7 FLFQGNNGTVLYTGDFRL----AQGEAARMELLHSGGRVKD--IQSVYLDTTFCDRRFYQ 60
Query: 162 FPSRE 166
PSRE
Sbjct: 61 IPSRE 65
>gi|386013352|ref|YP_005931629.1| Beta-lactamase domain protein [Pseudomonas putida BIRD-1]
gi|313500058|gb|ADR61424.1| Beta-lactamase domain protein [Pseudomonas putida BIRD-1]
Length = 480
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 13 EGSQVYFLTHLHSDHT---QGLSSAWARGPLFCSRLTAKLFPLKFPG---LDLS-----L 61
+G Q +TH+H DH L +A RGP+ CS +A+L PL L +S +
Sbjct: 59 QGIQALVITHVHLDHVGRIPALLAAGYRGPILCSEPSARLLPLVLEDAYKLSISSEPAQV 118
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGD-FGCLLYTGD 120
R L+ + V P T VE CPG L C + L G G D
Sbjct: 119 ARYLEF--IRDLIVPLPFEQWHTVVE--------CPG-LACRIRLQRAGHLLGSAYVECD 167
Query: 121 FRWEASNER----AEIGR--NTLVKALK-DDVVDILYLDNTYCN 157
+ E +N R ++G N L++ ++ + D+L L++TY +
Sbjct: 168 MQHEQTNSRYVFSGDLGASGNPLLRPVQPPERADVLVLESTYGD 211
>gi|350273517|ref|YP_004884830.1| putative metallo-beta-lactamase superfamily hydrolase [Rickettsia
japonica YH]
gi|348592730|dbj|BAK96691.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Rickettsia japonica YH]
Length = 560
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSL-IRV 64
++++ + LTH H DH G+ W +GP++ + TA ++ D + I++
Sbjct: 64 IEKYKKDIVGLILTHAHEDHLGGVQYLWNSLKGPIYTTTFTANFLKIRLNEYDFAKNIKI 123
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
++ I++ P S +E++ + + P + ++ R D G +L+TGD++++
Sbjct: 124 HEVKPGSKINL-DPFS-----LEMVPL-THSAPEMQA----IMIRTDAGNILHTGDWKFD 172
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNT 154
+ L+K+ D+ V L D+T
Sbjct: 173 NDPILGQKANEELLKSYGDEGVLALVCDST 202
>gi|189197579|ref|XP_001935127.1| hypothetical protein PTRG_04794 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187981075|gb|EDU47701.1| hypothetical protein PTRG_04794 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 609
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 86 VEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK-ALKDD 144
+ V IDANHC G +VM L G +LYTGD R E + + L+ L +
Sbjct: 42 IRVTLIDANHCVG----AVMFLIEGKGEIVLYTGDIRAETWWVNSLVQNPVLLPYTLGNL 97
Query: 145 VVDILYLDNTYCNSSY---AFPSREVAAQQI 172
+D +YLD T+ FPS+ +++
Sbjct: 98 RLDCVYLDTTFATKKMPYREFPSKAEGIREL 128
>gi|82659698|gb|ABB88926.1| PsoR [Microchaete diplosiphon]
Length = 554
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 15 SQVYFLTHLHSDHTQGL---SSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+ + ++H H DH +GL A+ P++ S +T+KL L + DL I
Sbjct: 73 ADLVLISHAHPDHARGLLQLHQAFPNLPIYASEVTSKLLSLNWLNQDLKSIPQF----CQ 128
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAE 131
++ + SP ++ V + A H PG + + + LLYTGDF SN R
Sbjct: 129 ALPLRSPVEFKEGLVAEL-FPAGHLPGAVAILLTYTSQRRTYRLLYTGDFFL--SNSRLV 185
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
G ++ L+ +D L ++ TY S + P R Q+
Sbjct: 186 EGLR--LEELRGLDLDALIIEATYGTSRH--PHRRNQENQL 222
>gi|34580471|ref|ZP_00141951.1| hypothetical protein [Rickettsia sibirica 246]
gi|28261856|gb|EAA25360.1| unknown [Rickettsia sibirica 246]
Length = 560
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 16/151 (10%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
++R+ + LTH H DH G+ W R P++ + TA ++ D +
Sbjct: 64 IERYKKDIVGLILTHAHEDHLGGVQYLWNRLKCPIYITTFTANFLKIRLNEYDFA----- 118
Query: 66 DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVM--LLFRGDFGCLLYTGDFRW 123
+I + G K +E +++ P M ++ R D G +L+TGD+++
Sbjct: 119 -----KNIKIHEVKPGSKINLEPFSLEM--VPLTHSAPEMQAIMIRTDAGNILHTGDWKF 171
Query: 124 EASNERAEIGRNTLVKALKDDVVDILYLDNT 154
+ + L+K+ D+ V L D+T
Sbjct: 172 DNDPILGKKADEELLKSYGDEGVLALVCDST 202
>gi|359416235|ref|ZP_09208586.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Candidatus Haloredivivus sp. G17]
gi|358033391|gb|EHK01945.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Candidatus Haloredivivus sp. G17]
Length = 320
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 116/309 (37%), Gaps = 67/309 (21%)
Query: 16 QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
V +H H DH + A G + S LT +L L+ L R L++ + +
Sbjct: 26 DVNIASHAHMDH-----AFQAEGKIVASDLTRRL-------LESRLDRELNLNEHPDVKL 73
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRN 135
ID+ H ILG + L+ D +LYTGD ++ +RA I
Sbjct: 74 ---------------IDSGH---ILGSTAALI-ESDGKRILYTGDV---STRDRAYIEGF 111
Query: 136 TLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGF-------- 187
V A DIL ++TY +Y+ P +E I W E + L G+
Sbjct: 112 EPVNA------DILISESTYGIPAYSLPPQEQIENNIKAWIEETEAPFLFGYSLGKAQKI 165
Query: 188 ----HDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIG----IMPSGLPWVVKPLKG 239
H + T L AV + + ++ L+ G ++ +G + P +
Sbjct: 166 QWLAHQV--TDKPLIAHGAVMKMNKVVEEHTDLSFDALPYGENKDMLENGAGIFIGPTRF 223
Query: 240 GGS--LPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIYSVPYSDHSCFTEIEEF 297
S L + +S K +G TEK K G Y P+SDH F ++ E
Sbjct: 224 AKSDALNELVKASNGVKAGFSGWGMTEKYKYRGG-------YDQVFPFSDHCGFDDLVEM 276
Query: 298 LNLVQPSNI 306
+ V P +
Sbjct: 277 VRAVNPEKV 285
>gi|374326785|ref|YP_005084985.1| mRNA 3'-end processing factor [Pyrobaculum sp. 1860]
gi|356642054|gb|AET32733.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum sp. 1860]
Length = 425
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 19 FLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFP-GLDLS---LIRVLDIGSWHS 72
FL+H H DH+ GL S + + PL+ + LT +L L + + LS L LD
Sbjct: 55 FLSHAHLDHSGGLPSLYVSTKTPLYSTPLTMELSDLMYADAIKLSGYYLPYTLDEVREAM 114
Query: 73 ISVVSPSSGEKTFVE----VIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNE 128
S + + GE + V A +A H PG S M + + +++TGDF +N
Sbjct: 115 SSAIPLTYGEPVEIGRDAVVTAYNAGHIPG----SAMAVIEAEGRVVVFTGDFNTVDTN- 169
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
+ R V L D++ ++ TY ++ + P RE
Sbjct: 170 ---MLRGADVYNLPRR-PDVVIMEATYASTDH--PPRE 201
>gi|334119066|ref|ZP_08493153.1| beta-lactamase domain protein [Microcoleus vaginatus FGP-2]
gi|333458537|gb|EGK87154.1| beta-lactamase domain protein [Microcoleus vaginatus FGP-2]
Length = 545
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 21 THLHSDHTQGL---SSAWARGPLFCSRLTAKLFPLKFPGL-DLSLIRVLDIGSWHSISVV 76
TH HSDH +GL ++ P++ S +TA+L PL +P L R W S V
Sbjct: 56 THAHSDHARGLLALHQSFPHLPIYASEVTARLLPLNWPELAQQPESRFCQGLPWQSPLEV 115
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG--CLLYTGDFRWEASNERAEIGR 134
P + F + H PG +V+L + ++YTGDF SN R G
Sbjct: 116 RPGLSVQLF------PSGHLPG--AATVLLTYAAPHRTYTVVYTGDFFL--SNSRLVEGL 165
Query: 135 NTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+ L+ D+L L+ +Y + + P R Q+
Sbjct: 166 P--LGELRGMKPDVLILEGSYGTARH--PHRRQLENQL 199
>gi|428318418|ref|YP_007116300.1| beta-lactamase domain protein [Oscillatoria nigro-viridis PCC 7112]
gi|428242098|gb|AFZ07884.1| beta-lactamase domain protein [Oscillatoria nigro-viridis PCC 7112]
Length = 563
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 21 THLHSDHTQGL---SSAWARGPLFCSRLTAKLFPLKFPGL-DLSLIRVLDIGSWHSISVV 76
TH HSDH +GL ++ P++ S +TA+L PL +P L R W S V
Sbjct: 75 THAHSDHARGLLALHQSFPHLPIYASEVTARLLPLNWPELPQQPESRFCQGLPWQSPLEV 134
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG--CLLYTGDFRWEASNERAEIGR 134
P + F + H PG +V+L + ++YTGDF SN R G
Sbjct: 135 RPGLSVQLF------PSGHLPG--AATVLLTYAAPHRTYTVVYTGDFFL--SNSRLVEGL 184
Query: 135 NTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+ L+ D+L L+ +Y + + P R Q+
Sbjct: 185 P--LGELRGMKPDVLILEGSYGTARH--PHRRQLENQL 218
>gi|319898897|ref|YP_004158990.1| hypothetical protein BARCL_0731 [Bartonella clarridgeiae 73]
gi|319402861|emb|CBI76412.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 558
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 17/194 (8%)
Query: 19 FLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
LTH H DH + W + PL+C+R TA L K R D H I V
Sbjct: 75 ILTHAHEDHYGAVLDLWPKLKIPLYCTRFTAGLLESK---------RQSD-SELHEIPVN 124
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNT 136
SG+ V +I+A + +V L G +++TGD++ + + +
Sbjct: 125 IFQSGDCFQVGSFSIEAIAVNHSIPEAVSLAITTSLGNVIHTGDWKIDHTPSLGAVTNEK 184
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIFTTKTS 196
+AL D V L D+T PS + + + + G I T ++
Sbjct: 185 RFRALGDKGVLALLCDSTNALQDGMSPSEKQVQESLSEI-----ILQAKGRVAIATFASN 239
Query: 197 LTRVRAVPRYSFSI 210
+ R+R++ + S+
Sbjct: 240 IGRIRSIVLAAISV 253
>gi|300864833|ref|ZP_07109682.1| beta-lactamase-like [Oscillatoria sp. PCC 6506]
gi|300337175|emb|CBN54832.1| beta-lactamase-like [Oscillatoria sp. PCC 6506]
Length = 543
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 23/187 (12%)
Query: 15 SQVYFLTHLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLS-LIRVLDIGSW 70
+ + F TH H DH +G L ++ + P++ S +T +L L +P L S R W
Sbjct: 49 ADLVFCTHAHPDHARGLLALHQSFPQLPIYASEVTTQLLALNWPELAASEHPRFCQALPW 108
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--LLYTGDFRWEASNE 128
HS + G + F + H PG +++L + L+YTGDF SN
Sbjct: 109 HSPVELRRGLGVQLF------PSGHLPG--AAAILLTYAAPHRTYSLVYTGDFF--LSNS 158
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFH 188
R G + L+ D+L L+ +Y + + P R Q+ ER+ G+
Sbjct: 159 RLVEGLP--LGDLRGLKPDVLILEGSYGTARH--PHRRQLENQL---AERIHRAIADGYS 211
Query: 189 DIFTTKT 195
+ T T
Sbjct: 212 VLLPTST 218
>gi|443310296|ref|ZP_21039953.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Synechocystis sp. PCC 7509]
gi|442779645|gb|ELR89881.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Synechocystis sp. PCC 7509]
Length = 547
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 19/151 (12%)
Query: 15 SQVYFLTHLHSDHTQGL---SSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+ + +H H+DH +GL A+ P++ S T +L PL + G+D H
Sbjct: 50 ADLVLCSHAHADHARGLLALHQAFPNLPIYASEATTRLLPLNWQGVDAQEF-------CH 102
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--LLYTGDFRWEASNER 129
++ SP V V A H PG +++L + LLYTGDF SN R
Sbjct: 103 ALPWRSPIEFHNGLV-VQLFPAGHLPG--AAAILLTYTNAQRSYKLLYTGDFF--LSNSR 157
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSY 160
G ++ L+ D+L ++ +Y S +
Sbjct: 158 LVDG--LALEELRGLEPDVLIIEGSYGTSRH 186
>gi|315122710|ref|YP_004063199.1| beta-lactamase domain-containing protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496112|gb|ADR52711.1| beta-lactamase domain-containing protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 560
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 80/196 (40%), Gaps = 35/196 (17%)
Query: 19 FLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKL---------FPLKFPGLDLSLIRVLDI 67
+TH H DH L W+ P++ S L FP P + +DI
Sbjct: 73 IITHAHEDHYGALHDLWSFLNVPVYASPFAIGLLEAKGVYERFPKNIPCISFQAGDQIDI 132
Query: 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASN 127
G + + +I NH + S+ L+ R G +++TGD++ + ++
Sbjct: 133 GPF----------------SIKSIQVNHS---IPESMALIIRSPVGNIVHTGDWKLDDTS 173
Query: 128 ERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGF 187
++ ++A+ D+ V L D+T S + AQ ++ ++ + G+
Sbjct: 174 VLGDLTDEDSLRAIGDEGVLALMCDSTNAMLHGTPVSEKDVAQNLYNIIKKTE-----GY 228
Query: 188 HDIFTTKTSLTRVRAV 203
I +S++R+R++
Sbjct: 229 AVITAFASSVSRIRSI 244
>gi|416379915|ref|ZP_11683997.1| hypothetical protein CWATWH0003_0833 [Crocosphaera watsonii WH
0003]
gi|357265771|gb|EHJ14491.1| hypothetical protein CWATWH0003_0833 [Crocosphaera watsonii WH
0003]
Length = 552
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 18/154 (11%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGLDLSLIRV 64
+D+ F +H H DH +GL S A+ P++ S++T L PL +P +
Sbjct: 53 IDQTQTPVDAVFCSHAHRDHARGLKSLHEAFPNLPIYASQVTKHLLPLNWPQKNPPKTSN 112
Query: 65 LDIG-SWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--LLYTGDF 121
G SW + + V + H PG S++L +R LLYTGDF
Sbjct: 113 FCQGLSWEKPLELFDD------LTVQLFPSGHLPG--AASILLSYRTSQRTYKLLYTGDF 164
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTY 155
S ++ ++AL+ DIL ++ +Y
Sbjct: 165 ----SLSNLQLVEGLSIEALRGLSPDILIIEGSY 194
>gi|67920842|ref|ZP_00514361.1| Beta-lactamase-like [Crocosphaera watsonii WH 8501]
gi|67856959|gb|EAM52199.1| Beta-lactamase-like [Crocosphaera watsonii WH 8501]
Length = 552
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 18/154 (11%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGLDLSLIRV 64
+D+ F +H H DH +GL S A+ P++ S++T L PL +P +
Sbjct: 53 IDQTQTPVDAVFCSHAHRDHARGLKSLHEAFPNLPIYASQVTKHLLPLNWPQKNPPKTSN 112
Query: 65 LDIG-SWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--LLYTGDF 121
G SW + + V + H PG S++L +R LLYTGDF
Sbjct: 113 FCQGLSWEKPLELFDD------LTVQLFPSGHLPG--AASILLSYRTSQRTYKLLYTGDF 164
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILYLDNTY 155
S ++ ++AL+ DIL ++ +Y
Sbjct: 165 ----SLSNLQLVEGLSIEALRGLSPDILIIEGSY 194
>gi|67516311|ref|XP_658041.1| hypothetical protein AN0437.2 [Aspergillus nidulans FGSC A4]
gi|40747380|gb|EAA66536.1| hypothetical protein AN0437.2 [Aspergillus nidulans FGSC A4]
gi|259489316|tpe|CBF89485.1| TPA: DNA repair protein, putative (AFU_orthologue; AFUA_1G04570)
[Aspergillus nidulans FGSC A4]
Length = 845
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 83 KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFR 122
K + V +DANHC G +VM L GD +LYTGD R
Sbjct: 128 KLSIRVTLLDANHCTG----AVMFLIEGDGKAILYTGDIR 163
>gi|262068265|ref|ZP_06027877.1| metallo-beta-lactamase family protein [Fusobacterium periodonticum
ATCC 33693]
gi|291378003|gb|EFE85521.1| metallo-beta-lactamase family protein [Fusobacterium periodonticum
ATCC 33693]
Length = 634
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 22/156 (14%)
Query: 19 FLTHLHSDHTQGLSSAWAR----GPLFCSRLTAKLFPLKFP--GLDLSLIRVLDIGSWHS 72
F+TH H DH G+ + + ++ +LT L KF G+ +L +++++GS
Sbjct: 143 FVTHGHEDHIGGIPYLYEKIEKDTVIYAGKLTNALIKSKFENFGVKKNLPKMVEVGSRSK 202
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE---ASNER 129
ISV G+ VE + + H + S L + G + TGDF+ + NE+
Sbjct: 203 ISV-----GKYFTVEFVKV--THS---IADSYSLSIKTPAGHVFLTGDFKIDLTPVDNEK 252
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
+ R + L ++ VD++ D+T PS
Sbjct: 253 VDFVR---LSELGEEGVDLMLSDSTNSEVEGFTPSE 285
>gi|32475492|ref|NP_868486.1| cleavage and polyadenylation specifity factor-related protein
[Rhodopirellula baltica SH 1]
gi|32446034|emb|CAD75863.1| cleavage and polyadenylation specifity factor-related protein
[Rhodopirellula baltica SH 1]
Length = 488
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 25/157 (15%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARG---PLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
G Q LTH+H DH + A G P+ CS TAKL P L + L IG
Sbjct: 97 GIQALLLTHVHIDHAGRIPYLLAAGFDHPILCSAPTAKLLP-------LVMEDALKIGFT 149
Query: 71 HSISVVSPSSGE--KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNE 128
S ++ G+ K V + + CPG G V LL G +L + F E +
Sbjct: 150 RSKRLIKKFLGQIRKLLVPLPYHQWHDCPG--GVKVRLL---PAGHVLGSTMFEIELKDG 204
Query: 129 RAEI-------GRNTLVK-ALKDDVVDILYLDNTYCN 157
R + G N L+ + + D+L L++TY +
Sbjct: 205 RRAVFSGDVGAGTNPLLNPPVSPERADLLVLESTYGD 241
>gi|347758111|ref|YP_004865673.1| metallo-beta-lactamase superfamily protein [Micavibrio
aeruginosavorus ARL-13]
gi|347590629|gb|AEP09671.1| metallo-beta-lactamase superfamily protein [Micavibrio
aeruginosavorus ARL-13]
Length = 569
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 15/125 (12%)
Query: 20 LTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+TH H DH ++ W+ R P++C+ TA + KF L S S I VVS
Sbjct: 85 VTHAHEDHVGAVAHLWSRLRCPIYCTAFTASVLRQKFNDLPGS--------SNAKIHVVS 136
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTL 137
P G+ + ++ H + +V + + G ++++GD W E IG NT
Sbjct: 137 P--GQMLNLAPFEMEFIHVAHSIPQAVAVAIKSPHGHIVHSGD--WNLDPEPV-IGDNTD 191
Query: 138 VKALK 142
A K
Sbjct: 192 AAAFK 196
>gi|448416590|ref|ZP_21578830.1| metallo-beta-lactamase superfamily domain-containing protein
[Halosarcina pallida JCM 14848]
gi|445678882|gb|ELZ31364.1| metallo-beta-lactamase superfamily domain-containing protein
[Halosarcina pallida JCM 14848]
Length = 753
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 42/113 (37%), Gaps = 18/113 (15%)
Query: 19 FLTHLHSDHTQGLSSAWARG-PLFCSRLTAKLFP---------LKFPGLDLSLIRVLDIG 68
LTH H DH QGL A G P+ S TA + F + L RV I
Sbjct: 64 LLTHAHLDHYQGLDDAHRDGAPILTSPGTAAILEDVFTEGARRYDFSNAEELLKRVEPIS 123
Query: 69 SWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
WH + V V + H PG G V + D +L TGDF
Sbjct: 124 EWHEVL--------GDTVAVRPVPTGHTPGACGLLVDVSDGDDRVRILATGDF 168
>gi|117924914|ref|YP_865531.1| beta-lactamase domain-containing protein [Magnetococcus marinus
MC-1]
gi|117608670|gb|ABK44125.1| beta-lactamase domain protein [Magnetococcus marinus MC-1]
Length = 559
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 17/121 (14%)
Query: 10 RWTEGSQV----YFLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSLIR 63
RW E + LTH H DH L W R P+F + T L +KF DLS
Sbjct: 58 RWLEERKQDVVGIILTHGHEDHIGALPYVWPRLESPIFGTAFTLGLVKMKFKEHDLSTAT 117
Query: 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123
+ ++ + V P + +I I H I+ S + + R G LL++GDF++
Sbjct: 118 IREVRHREAFQ-VGPFN-------LIFIHVTHS--IVDASAVAI-RTPIGTLLHSGDFKF 166
Query: 124 E 124
+
Sbjct: 167 D 167
>gi|154281375|ref|XP_001541500.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411679|gb|EDN07067.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 559
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 100/258 (38%), Gaps = 50/258 (19%)
Query: 5 LISVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGP-LFCSRLTAKLFPL--KFPGLDLSL 61
+ + D E FL+H+HSDH QGL S R P ++CS T ++ K+P
Sbjct: 1 MSTFDGIVEAPLACFLSHVHSDHLQGLES--LRAPFIYCSAATREILLRLEKYP------ 52
Query: 62 IRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDF 121
H I+ K +E H +L G+ +LYTGD
Sbjct: 53 ---------HRINF------SKGILESRKQHYKHLSKLL---------GNGKAILYTGDI 88
Query: 122 RWEASNERAEIGRNTLVK-ALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQ 180
R E+ I L+ + ++D +YLD T+ S + + A+ I E++Q
Sbjct: 89 RAESWWVDNLIRNPVLIPYTIGSKLLDKIYLDTTFATKSDVYQTFASKAEGIRELLEKVQ 148
Query: 181 T----------MHLLGFHDIFTTKTSLTRVRA-VPRYSFSIDTLESLNTMHPTIGIMPSG 229
T + G+ D++ ++ R V RY + +SL T + G
Sbjct: 149 TYPDNTLFYLRVWTFGYEDVWLALSAALNTRIHVDRYQMGV--YQSLATRDAS-GFGIDE 205
Query: 230 LPWVVKPLKGGGSLPGSL 247
P++ G +PG L
Sbjct: 206 APFLCGFRLGNSQIPGCL 223
>gi|417301658|ref|ZP_12088804.1| metallo-beta-lactamase family protein [Rhodopirellula baltica WH47]
gi|421611579|ref|ZP_16052718.1| metallo-beta-lactamase family protein [Rhodopirellula baltica SH28]
gi|440716395|ref|ZP_20896906.1| metallo-beta-lactamase family protein [Rhodopirellula baltica
SWK14]
gi|327542031|gb|EGF28529.1| metallo-beta-lactamase family protein [Rhodopirellula baltica WH47]
gi|408497673|gb|EKK02193.1| metallo-beta-lactamase family protein [Rhodopirellula baltica SH28]
gi|436438741|gb|ELP32266.1| metallo-beta-lactamase family protein [Rhodopirellula baltica
SWK14]
Length = 465
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 25/157 (15%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARG---PLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
G Q LTH+H DH + A G P+ CS TAKL P L + L IG
Sbjct: 74 GIQALLLTHVHIDHAGRIPYLLAAGFDHPILCSAPTAKLLP-------LVMEDALKIGFT 126
Query: 71 HSISVVSPSSGE--KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNE 128
S ++ G+ K V + + CPG G V LL G +L + F E +
Sbjct: 127 RSKRLIKKFLGQIRKLLVPLPYHQWHDCPG--GVKVRLL---PAGHVLGSTMFEIELKDG 181
Query: 129 RAEI-------GRNTLVK-ALKDDVVDILYLDNTYCN 157
R + G N L+ + + D+L L++TY +
Sbjct: 182 RRAVFSGDVGAGTNPLLNPPVSPERADLLVLESTYGD 218
>gi|336315314|ref|ZP_08570225.1| Putative exonuclease of the beta-lactamase fold involved in RNA
processing [Rheinheimera sp. A13L]
gi|335880291|gb|EGM78179.1| Putative exonuclease of the beta-lactamase fold involved in RNA
processing [Rheinheimera sp. A13L]
Length = 471
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 7 SVDRWTEGSQVYFLTHLHSDHTQG---LSSAWARGPLFCSRLTAKLFPL 52
+D EG Q LTH+H DH L +A +GP++CS+ +A L PL
Sbjct: 53 QIDFPLEGIQALLLTHVHIDHAGRIPYLIAAGFKGPIYCSKASALLLPL 101
>gi|319405683|emb|CBI79306.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 558
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 12/156 (7%)
Query: 19 FLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
LTH H DH + W + PL+C+ TA L K R D +H I V
Sbjct: 75 ILTHAHEDHYGAVLDLWPKLKIPLYCTCFTAGLLESK---------RQSDF-EFHEIPVN 124
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNT 136
SG+ V AI+A + +V L G +++TGD++ + + I
Sbjct: 125 IFQSGDYFQVGPFAIEAISVNHSIPEAVSLAITTSLGSVIHTGDWKIDHTPSLGAITNEE 184
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+AL + V L D+T PS + + I
Sbjct: 185 RFRALGNKGVLALLCDSTNALQDGIAPSEQQVQKSI 220
>gi|49474192|ref|YP_032234.1| hypothetical protein BQ05790 [Bartonella quintana str. Toulouse]
gi|403530471|ref|YP_006665000.1| hypothetical protein RM11_0555 [Bartonella quintana RM-11]
gi|49239696|emb|CAF26071.1| hypothetical protein BQ05790 [Bartonella quintana str. Toulouse]
gi|403232543|gb|AFR26286.1| hypothetical protein RM11_0555 [Bartonella quintana RM-11]
Length = 558
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 12/138 (8%)
Query: 19 FLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
LTH H DH + W + PL+C+ TA L K R D GS H IS+
Sbjct: 75 ILTHAHEDHYGAVLDLWPKLKVPLYCTPFTAGLLESK---------RQSDFGS-HKISLN 124
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNT 136
+G+ V A++A + SV L G +++TGD++ + + +
Sbjct: 125 IFQAGDCFQVGSFAVEAIAVNHSIPESVSLAITTSLGTVIHTGDWKIDHTPSLGTVTDEK 184
Query: 137 LVKALKDDVVDILYLDNT 154
+AL V L D+T
Sbjct: 185 RFRALGKKGVLALLCDST 202
>gi|418936604|ref|ZP_13490311.1| RNA-metabolising metallo-beta-lactamase [Rhizobium sp. PDO1-076]
gi|375056733|gb|EHS52901.1| RNA-metabolising metallo-beta-lactamase [Rhizobium sp. PDO1-076]
Length = 555
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 17/198 (8%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
+ + + + +TH H DH L+ W P++ S TA + K R
Sbjct: 62 IQKQKKNLKAIIITHAHEDHYGALNDLWPGLNVPVYASGFTAGMLEAK---------RAY 112
Query: 66 DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125
+ GS I + +G+ V +I+A + + L+ R G L++TGD++ +
Sbjct: 113 E-GSRAEIPITPFKAGDTINVGPFSIEAIGVNHSIPEPMSLIIRTPLGNLVHTGDWKIDH 171
Query: 126 SNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLL 185
+ I +A+ D+ V + D+T PS E ++ + R +
Sbjct: 172 NPSLGPITDEQRFRAVGDEGVLAVMCDSTNAMRDGVSPSEEEVSEGL-----RKIIVAAE 226
Query: 186 GFHDIFTTKTSLTRVRAV 203
G I T +++ R+R++
Sbjct: 227 GRVAITTFSSNVGRIRSI 244
>gi|431801332|ref|YP_007228235.1| beta-lactamase domain-containing protein [Pseudomonas putida
HB3267]
gi|430792097|gb|AGA72292.1| beta-lactamase domain-containing protein [Pseudomonas putida
HB3267]
Length = 475
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 12 TEGSQVYFLTHLHSDHT---QGLSSAWARGPLFCSRLTAKLFPL 52
+G Q +TH+H DH L +A RGP+ CS +AKL PL
Sbjct: 55 VQGIQALVITHVHLDHVGRIPALLAAGYRGPILCSEPSAKLLPL 98
>gi|428220642|ref|YP_007104812.1| exonuclease [Synechococcus sp. PCC 7502]
gi|427993982|gb|AFY72677.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Synechococcus sp. PCC 7502]
Length = 547
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 19 FLTHLHSDHTQGLSSAWARG---PLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
F +H H+DH++G+ + A P++ S +TA L L P L+ I +D W
Sbjct: 60 FCSHAHADHSRGIDALQAIAPDLPIYTSAVTAHLLTLNCPSASLASIFPVD---WGETIE 116
Query: 76 VSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRN 135
+ P+ + + + + H PG + + +LYTGDF SN R G
Sbjct: 117 IEPN------LLIKLLPSGHLPGAASIWLTYCTQDQDYNVLYTGDFY--ISNSRLVQGLK 168
Query: 136 TLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
++ + +D+L L+ + + + P R Q +
Sbjct: 169 --LEQFRGSSLDVLILEGSLGTTKH--PHRRTQEQNL 201
>gi|380490332|emb|CCF36086.1| artemis protein [Colletotrichum higginsianum]
Length = 580
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 84 TFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKD 143
+ ++V DANHCPG +VM L +LYTGD R E + I RN V
Sbjct: 50 SHIQVTLFDANHCPG----AVMFLIEDLHRAILYTGDVRSEPWFVNS-IARNPAVIEYTS 104
Query: 144 DV--VDILYLDNTY 155
+ +D +YLD ++
Sbjct: 105 GIRTLDKIYLDTSF 118
>gi|429208397|ref|ZP_19199649.1| Metallo-beta-lactamase family protein, RNA-specific [Rhodobacter
sp. AKP1]
gi|428188652|gb|EKX57212.1| Metallo-beta-lactamase family protein, RNA-specific [Rhodobacter
sp. AKP1]
Length = 557
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 21/165 (12%)
Query: 16 QVYFLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73
+ F+TH H DH L W R P++ R T + LKF L ++ +G+ +
Sbjct: 70 EAIFITHAHEDHIGALGHLWPRLKAPVYARRFTGTIGRLKFEEHGLPADQITIVGARSEV 129
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAE-- 131
P EV + +H + S L+ G ++++GDF+ + S E
Sbjct: 130 VEAGP-------FEVQFVPVSHS---IPESSALVIDTPAGRIVHSGDFKLDRSPVVGEPW 179
Query: 132 -------IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAA 169
I VKAL D ++ L ++ P + + A
Sbjct: 180 ADETFRAIAAERPVKALMCDSTNVFSLHPGRSEATLGDPLKALIA 224
>gi|403382005|ref|ZP_10924062.1| metal-dependent RNase, consists of a metallo-beta-lactamase domain
and an RNA-binding KH domain [Paenibacillus sp. JC66]
Length = 436
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 22/149 (14%)
Query: 19 FLTHLHSDHTQGLSSAWA---RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISV 75
FL+H H DH+ GL + RG ++ +R TA+ F + + G +S
Sbjct: 56 FLSHAHEDHSVGLPLLYRMGYRGEVWTTRATARRIAANF-----RMWQGYAAGQGGEVSY 110
Query: 76 VSPSSGEKTF--VEVIAIDA---NHCPGILGC---------SVMLLFRGDFGCLLYTGDF 121
+ G F +E A + + PGI C SV +L + Y+GDF
Sbjct: 111 DAEDEGRLCFRYLEDYASEGEWFDAAPGIRACWGPSGHLIGSVWILLDVAGCKVFYSGDF 170
Query: 122 RWEASNERAEIGRNTLVKALKDDVVDILY 150
E+S RAE+ R + L +VD Y
Sbjct: 171 TSESSLLRAELPRPEHCRNLAAAIVDAAY 199
>gi|425442305|ref|ZP_18822557.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389716740|emb|CCH99070.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 546
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 33/186 (17%)
Query: 1 MEKGLISVDRWTEGSQ----VYFLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLK 53
++ GL + TE + + F +H HSDH +GL + + + P++ S +T +L PL+
Sbjct: 42 LDCGLADMQPLTENKKPPVDLVFCSHAHSDHIRGLMALHQTYPQLPVYASEVTVQLLPLQ 101
Query: 54 FPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG 113
+P + W S + + VE+ A H PG V+ ++
Sbjct: 102 WPDSAEEIGSFCQGWPWRSPIALF----DDLTVEIFP--AGHLPG--AAVVLFTYKTPKR 153
Query: 114 C--LLYTGDFRWEASNERAEIGRNTLVKALKDDVV-----DILYLDNTYCNSSYAFPSRE 166
+LYTGDF + LV+ L D++ D+L ++ +Y + P R
Sbjct: 154 TYKVLYTGDF---------SLSNFQLVEGLSIDLLRGISPDVLIIEGSYGTERH--PHRR 202
Query: 167 VAAQQI 172
+Q+
Sbjct: 203 QQEKQL 208
>gi|297526338|ref|YP_003668362.1| hypothetical protein Shell_0331 [Staphylothermus hellenicus DSM
12710]
gi|297255254|gb|ADI31463.1| conserved hypothetical protein [Staphylothermus hellenicus DSM
12710]
Length = 357
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 131/319 (41%), Gaps = 54/319 (16%)
Query: 7 SVDRWTEGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSL----- 61
++D + E V ++H H DH GL + L+ ++ A P P DL L
Sbjct: 30 AIDGFAE-KPVRVISHAHYDHIVGLKDSI----LYSKQIVAT--P---PTHDLILTLGYV 79
Query: 62 ----IRVLDIGSWHSISVVSPSS--GEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCL 115
+R+L ++ + GEK ++ I ++H I+G + +L+ GD +
Sbjct: 80 GGRELRMLYKNKMVRLNYYEEYTYGGEK----LVLIPSHH---IIGSAQVLIEIGDL-RI 131
Query: 116 LYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR-EVAAQQIWV 174
YTGDF+ +G NT + D +DIL +++TY + SY P + EV + +
Sbjct: 132 GYTGDFK---------LGENTKIM----DGLDILIIESTYGDPSYRRPFKNEVEDLLVDI 178
Query: 175 WPERLQT---MHLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGIMPSGLP 231
+ L+ + + G+H + R V + + + G G
Sbjct: 179 VLDGLEMYGKVVIFGYHGKIQEAMQILRRNGVKEPFLMPKRIYEVTRIAEKYGYEIGGY- 237
Query: 232 WVVKPLKGGGSLPGS---LFSSYQSKWRATGGTQTEKLK----EALGSVDRFHKYIYSVP 284
+ ++ LKG L + LF + G T + E G + + +Y + V
Sbjct: 238 YNMRSLKGREILKSNRYILFEHFNKANHRRLGNNTLYIVLSGWEFNGPIKKIDRYTWLVA 297
Query: 285 YSDHSCFTEIEEFLNLVQP 303
SDH+ F E+ E++ +P
Sbjct: 298 LSDHADFDELIEYVEKAEP 316
>gi|449505918|ref|XP_004174915.1| PREDICTED: DNA cross-link repair 1A protein [Taeniopygia guttata]
Length = 946
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 64/171 (37%), Gaps = 26/171 (15%)
Query: 13 EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLD--LSLIRVLDI-GS 69
EG YFLTH HSDH GL+ + R P++C++ + + R + GS
Sbjct: 641 EGCTAYFLTHFHSDHYSGLTKNF-RFPIYCNKKFKEFLTTVKSQEEKHCPFTRKYQVRGS 699
Query: 70 WHSISVVSPSSGEKTFVEVIAIDA---NHCPGILGCSVMLLFRGDFGCLLYTGDFRWEAS 126
++ + E+ A H P FR C TG+ S
Sbjct: 700 GQAVDAFQ-------YGEIEAGSGYFITHGPSHRDRGFTSKFRSPINCNKVTGNLV--KS 750
Query: 127 NERAEIGRNTLVKALKDDV------VDILYLD-NTYCNSSYAFPSREVAAQ 170
R + V L D + +L LD N YC+ Y FPS++ Q
Sbjct: 751 KLRVQ---EQYVHVLPMDTQCVVNGIKVLLLDANQYCSPEYTFPSQQEVIQ 798
>gi|425452094|ref|ZP_18831912.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389766203|emb|CCI08061.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 546
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 33/186 (17%)
Query: 1 MEKGLISVDRWTEGSQ----VYFLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLK 53
++ GL + TE + + F +H HSDH +GL + + + P++ S +T +L PL+
Sbjct: 42 LDCGLADMQPLTENKKPPVDLVFCSHAHSDHIRGLMALHQTYPQLPVYASEVTVQLLPLQ 101
Query: 54 FPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG 113
+P + W S + + VE+ A H PG V+ ++
Sbjct: 102 WPDSAEEIGSFCQGWPWRSPITLF----DDLTVEIFP--AGHLPG--AAVVLFTYKTPKR 153
Query: 114 C--LLYTGDFRWEASNERAEIGRNTLVKALKDDVV-----DILYLDNTYCNSSYAFPSRE 166
+LYTGDF + LV+ L D++ D+L ++ +Y + P R
Sbjct: 154 TYKVLYTGDF---------SLSNFQLVEGLSIDLLRGISPDVLIIEGSYGTERH--PHRR 202
Query: 167 VAAQQI 172
+Q+
Sbjct: 203 QQEKQL 208
>gi|440753753|ref|ZP_20932955.1| metallo-beta-lactamase superfamily protein [Microcystis aeruginosa
TAIHU98]
gi|440173959|gb|ELP53328.1| metallo-beta-lactamase superfamily protein [Microcystis aeruginosa
TAIHU98]
Length = 546
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 33/186 (17%)
Query: 1 MEKGLISVDRWTEGSQ----VYFLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLK 53
++ GL + TE + + F +H HSDH +GL + + + P++ S +T +L PL+
Sbjct: 42 LDCGLADMQPLTENKKPPVDLVFCSHAHSDHIRGLMALHQTYPQLPVYASEVTVQLLPLQ 101
Query: 54 FPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG 113
+P + W S + + VE+ A H PG V+ ++
Sbjct: 102 WPDSAEEIGSFCQGWPWRSPITLF----DDLTVEIFP--AGHLPG--AAVVLFTYKTPKR 153
Query: 114 C--LLYTGDFRWEASNERAEIGRNTLVKALKDDVV-----DILYLDNTYCNSSYAFPSRE 166
+LYTGDF + LV+ L D++ D+L ++ +Y + P R
Sbjct: 154 TYKVLYTGDF---------SLSNFQLVEGLSIDLLRGISPDVLIIEGSYGTERH--PHRR 202
Query: 167 VAAQQI 172
+Q+
Sbjct: 203 QQEKQL 208
>gi|434393081|ref|YP_007128028.1| beta-lactamase domain-containing protein [Gloeocapsa sp. PCC 7428]
gi|428264922|gb|AFZ30868.1| beta-lactamase domain-containing protein [Gloeocapsa sp. PCC 7428]
Length = 549
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 71/184 (38%), Gaps = 20/184 (10%)
Query: 15 SQVYFLTHLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+ + +H H DH QG L A+ P++ S T +L PL + L+ S + W
Sbjct: 65 ADIVLCSHAHPDHAQGLLALHQAFPSLPIYASEATTQLLPLNW--LEASQTQFCQALPWR 122
Query: 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAE 131
S + F A H PG + LLYTGDF SN R
Sbjct: 123 SPVEFQDGLSAELF------PAGHLPGAAAILLTYTTPQRTYTLLYTGDFFL--SNSRLV 174
Query: 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQIWVWPERLQTMHLLGFHDIF 191
G ++ L+ D+L ++ +Y + + P R Q+ ER+ G+ +
Sbjct: 175 EGMP--LEELRGLKPDVLIIEGSYGTARH--PHRRSQENQLA---ERINRAIAQGYCVLM 227
Query: 192 TTKT 195
T T
Sbjct: 228 PTPT 231
>gi|51473630|ref|YP_067387.1| hypothetical protein RT0428 [Rickettsia typhi str. Wilmington]
gi|383752408|ref|YP_005427508.1| hypothetical protein RTTH1527_02105 [Rickettsia typhi str. TH1527]
gi|383843245|ref|YP_005423748.1| hypothetical protein RTB9991CWPP_02115 [Rickettsia typhi str.
B9991CWPP]
gi|51459942|gb|AAU03905.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
gi|380759051|gb|AFE54286.1| hypothetical protein RTTH1527_02105 [Rickettsia typhi str. TH1527]
gi|380759892|gb|AFE55126.1| hypothetical protein RTB9991CWPP_02115 [Rickettsia typhi str.
B9991CWPP]
Length = 560
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSL-IRV 64
++++ + LTH H DH G+ W + P++ + TA ++ D + I++
Sbjct: 64 IEKYKKDLVGLILTHAHEDHLGGVQYLWNSLKCPIYTTTFTANFLKIRLNEYDFAKNIKI 123
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
H + S + E +E++ + + P + ++ R D G +L+TGD++++
Sbjct: 124 ------HEVKPGSKINLEPFLLEMVPL-THSAPEMQA----IMIRTDAGNILHTGDWKFD 172
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNT 154
E L+K+ D+ V L D+T
Sbjct: 173 NDPILGEKVDEELLKSYGDEGVLALVCDST 202
>gi|390440629|ref|ZP_10228855.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389836091|emb|CCI32981.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 546
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 39/189 (20%)
Query: 1 MEKGLISVDRWTEGSQ----VYFLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLK 53
++ GL + T+ + + F +H HSDH +GL + + + P++ S +T +L PL+
Sbjct: 42 LDCGLADMQPLTQNKKPPVDLVFCSHAHSDHIRGLMALHQTYPQLPVYASEVTVQLLPLQ 101
Query: 54 FPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAID---ANHCPGILGCSVMLLFRG 110
+P V +IGS+ P T + + ++ A H PG V+ ++
Sbjct: 102 WPD------SVEEIGSF---CQGWPWRSPITLFDDLTVEIFPAGHLPG--AAVVLFTYKT 150
Query: 111 DFGC--LLYTGDFRWEASNERAEIGRNTLVKALKDDVV-----DILYLDNTYCNSSYAFP 163
+LYTGDF + LV+ L D++ D+L ++ +Y + P
Sbjct: 151 PKRTYKVLYTGDF---------SLSNFQLVEGLSIDLLRGISPDVLIIEGSYGTERH--P 199
Query: 164 SREVAAQQI 172
R +Q+
Sbjct: 200 HRRQQEKQL 208
>gi|395779962|ref|ZP_10460430.1| hypothetical protein MCW_00517 [Bartonella washoensis 085-0475]
gi|395419712|gb|EJF86008.1| hypothetical protein MCW_00517 [Bartonella washoensis 085-0475]
Length = 558
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 12/149 (8%)
Query: 20 LTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
LTH H DH + W + P++C+ TA L K + D GS H IS+
Sbjct: 76 LTHAHEDHYGAVLDLWPKLKVPVYCTPFTAGLLESK---------KQSDFGS-HKISLNI 125
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTL 137
+G+ V AI+A + SV L G +++TGD++ + + +
Sbjct: 126 FQAGDCFQVGSFAIEAIAVSHSIPESVSLAITTSLGTVIHTGDWKIDHTPSLGAVTDEKR 185
Query: 138 VKALKDDVVDILYLDNTYCNSSYAFPSRE 166
+AL V L D+T PS +
Sbjct: 186 FRALGKKGVLALLCDSTNACKDGISPSEQ 214
>gi|19704545|ref|NP_604107.1| metal dependent hydrolase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296328424|ref|ZP_06870950.1| metallo-beta-lactamase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|19714831|gb|AAL95406.1| Metal dependent hydrolase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296154498|gb|EFG95290.1| metallo-beta-lactamase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 608
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 22/156 (14%)
Query: 19 FLTHLHSDHTQGLSSAWAR----GPLFCSRLTAKLFPLKFP--GLDLSLIRVLDIGSWHS 72
F+TH H DH G+ + + ++ +LT L KF G+ +L +++++GS
Sbjct: 119 FVTHGHEDHIGGIPYLYEKIEKDTVIYAGKLTNALIKSKFENFGVKKALPKMVEVGSRSK 178
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE---ASNER 129
+SV G+ VE + + H + S L + G + TGDF+ + NE+
Sbjct: 179 VSV-----GKYFTVEFVKV--THS---IADSYCLSVKTPAGHVFLTGDFKIDLTPVDNEK 228
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
+ R + L ++ VD++ D+T PS
Sbjct: 229 VDFMR---LSELGEEGVDLMLSDSTNSEVEGFTPSE 261
>gi|170720568|ref|YP_001748256.1| beta-lactamase domain-containing protein [Pseudomonas putida W619]
gi|169758571|gb|ACA71887.1| beta-lactamase domain protein [Pseudomonas putida W619]
Length = 482
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 50/178 (28%)
Query: 14 GSQVYFLTHLHSDHT---QGLSSAWARGPLFCSRLTAKLFPL------------------ 52
G Q +TH+H DH L +A RGP+ CS +AKL PL
Sbjct: 57 GIQALIITHVHLDHVGRIPALLAAGFRGPILCSEPSAKLLPLVLEDAYKLGISSDPVQVD 116
Query: 53 KFPGLDLSLIRVLDIGSWHSI--------SVVSPSSGEKTFVEVIAIDANHCPGILGCSV 104
++ L L+ L WH++ SV +G + D + PG+ S
Sbjct: 117 RYLALLQRLVVALPFEQWHTVVEGQGVACSVRLQRAGHLLGSAYVECDVRY-PGV-EPST 174
Query: 105 MLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALK-DDVVDILYLDNTYCNSSYA 161
++F GD G N L++A++ + D+L L++TY + +A
Sbjct: 175 RVVFSGDLGAPC------------------NPLLRAVQPPERADVLVLESTYGDRLHA 214
>gi|423712679|ref|ZP_17686979.1| hypothetical protein MCQ_01437 [Bartonella washoensis Sb944nv]
gi|395411472|gb|EJF77994.1| hypothetical protein MCQ_01437 [Bartonella washoensis Sb944nv]
Length = 558
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 12/149 (8%)
Query: 20 LTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
LTH H DH + W + P++C+ TA L K + D GS H IS+
Sbjct: 76 LTHAHEDHYGAVLDLWPKLKVPVYCTPFTAGLLESK---------KQSDFGS-HKISLNI 125
Query: 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTL 137
+G+ V AI+A + SV L G +++TGD++ + + +
Sbjct: 126 FQAGDCFQVGSFAIEAIAVSHSIPESVSLAITTSLGTVIHTGDWKIDHTPSLGAVTDEKR 185
Query: 138 VKALKDDVVDILYLDNTYCNSSYAFPSRE 166
+AL V L D+T PS +
Sbjct: 186 FRALGKKGVLALLCDSTNACKDGISPSEQ 214
>gi|443327481|ref|ZP_21056105.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Xenococcus sp. PCC 7305]
gi|442792910|gb|ELS02373.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Xenococcus sp. PCC 7305]
Length = 548
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 19 FLTHLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS--WHSI 73
F +H H DH +G L A+ + P++ S +TA+L L +P S+I + + + W S
Sbjct: 64 FCSHAHQDHCRGLLALHQAFPKLPIYTSEITAQLLTLYWPN---SIIESMALTALPWRSP 120
Query: 74 SVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIG 133
+ GE +E+ A H PG + + +LYTGDF S ++
Sbjct: 121 KKL----GENLELELYP--AGHLPGAAALVLTYQTKKRDYKVLYTGDF----SLSNFQLV 170
Query: 134 RNTLVKALKDDVVDILYLDNTY 155
++ ++ D+L ++ +Y
Sbjct: 171 EGLSIEGMRGLEPDVLIIEGSY 192
>gi|302342721|ref|YP_003807250.1| beta-lactamase fold Zn-dependent hydrolase [Desulfarculus baarsii
DSM 2075]
gi|301639334|gb|ADK84656.1| Zn-dependent hydrolase of the beta-lactamase fold [Desulfarculus
baarsii DSM 2075]
Length = 258
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 15 SQVYFLTHLHSDH---TQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+ FLTH H DH GL++ W R P+FC + + L GLD +L+R +D W
Sbjct: 46 ATAIFLTHGHFDHALGVAGLANRW-RAPVFCHAVAGRT--LMRDGLDPALLRPIDHDGWR 102
Query: 72 S----ISVVSPSSGEKTF 85
+SV+S SG F
Sbjct: 103 ESIGPLSVLSHHSGHVRF 120
>gi|425469400|ref|ZP_18848339.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389880930|emb|CCI38441.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 546
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 45/192 (23%)
Query: 1 MEKGLISVDRWTEGSQ----VYFLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLK 53
++ GL + T+ + + F +H HSDH +GL + + + P++ S +T +L PL+
Sbjct: 42 LDCGLADMQPLTQNKKPPVDLVFCSHAHSDHIRGLMALHQTYPQLPVYASEVTVQLLPLQ 101
Query: 54 FPGLDLSLIRVLDIGS------WHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLL 107
+P V +IGS W S + + VE+ A H PG V+
Sbjct: 102 WPD------SVEEIGSFCQGWPWRSPIALF----DDLTVEIFP--AGHLPG--AAVVLFT 147
Query: 108 FRGDFGC--LLYTGDFRWEASNERAEIGRNTLVKALKDDVV-----DILYLDNTYCNSSY 160
++ +LYTGDF + LV+ L D++ D+L ++ +Y +
Sbjct: 148 YKTPKRTYKVLYTGDF---------SLSNFQLVEGLSIDLLRGISPDVLIIEGSYGTERH 198
Query: 161 AFPSREVAAQQI 172
P R +Q+
Sbjct: 199 --PHRRQQEKQL 208
>gi|383501737|ref|YP_005415096.1| hypothetical protein MC5_04800 [Rickettsia australis str. Cutlack]
gi|378932748|gb|AFC71253.1| hypothetical protein MC5_04800 [Rickettsia australis str. Cutlack]
Length = 560
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSL-IRV 64
++++ + LTH H DH G+ W+ + P++ + TA ++ D + I++
Sbjct: 64 IEKYKKDIVGLILTHAHEDHLGGVQYLWSSLKCPIYTTTFTANFLKIRLNEYDFAKNIKI 123
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
++ IS+ E +E++ + + P + ++ R D G +L+TGD++++
Sbjct: 124 HEVKPGSKISL------EPFSLEMVPL-THSAPEMQA----IMIRTDAGNILHTGDWKFD 172
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNT 154
+ L+K+ D+ V L D+T
Sbjct: 173 NDPVLGKKVDEELLKSYGDEGVLALVCDST 202
>gi|428775416|ref|YP_007167203.1| hypothetical protein PCC7418_0770 [Halothece sp. PCC 7418]
gi|428689695|gb|AFZ42989.1| hypothetical protein PCC7418_0770 [Halothece sp. PCC 7418]
Length = 547
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 26/160 (16%)
Query: 21 THLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+H HSDH +GL S A+ P++ S +T +L PL + L+ ++
Sbjct: 69 SHAHSDHARGLLSLHRAFPDLPVYASEVTVQLLPLNW----------LEEKDVPPLAHAL 118
Query: 78 PSSGEKTFVEVIAID---ANHCPGILGCSVMLLFRGDF--GCLLYTGDFRWEASNERAEI 132
P+ + + ++ A H PG C++ L + +LYTGDF SN R
Sbjct: 119 PTRSRIALADDLTVELYPAGHLPG--ACAIALTYTTPQRRHRILYTGDFFL--SNSRLAE 174
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
G + ++ L+ DIL ++ +Y + + P R Q+
Sbjct: 175 GLS--IEELRGFSPDILIIEGSYGTARH--PHRRQQENQL 210
>gi|428313582|ref|YP_007124559.1| exonuclease [Microcoleus sp. PCC 7113]
gi|428255194|gb|AFZ21153.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Microcoleus sp. PCC 7113]
Length = 545
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 16/162 (9%)
Query: 15 SQVYFLTHLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLI-RVLDIGSW 70
+ + +H HSDH QG L A+ + P++ S +T +L PL + L I W
Sbjct: 61 ADLVLCSHAHSDHAQGLLALHQAFPQLPIYASEVTTQLLPLNWSELPPQKIPHFCQALPW 120
Query: 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERA 130
S + F A H PG + L YTGDF SN R
Sbjct: 121 RSPVEFCDGLSAELF------PAGHLPGAAAFLLTYTTPKKTYRLFYTGDFFL--SNSRL 172
Query: 131 EIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
G + +++L+ D+L ++ TY ++ + P R Q+
Sbjct: 173 VEGLS--IESLRGMQPDVLIVEGTYGSARH--PHRRQQENQL 210
>gi|421527051|ref|ZP_15973656.1| metal dependent hydrolase [Fusobacterium nucleatum ChDC F128]
gi|402256780|gb|EJU07257.1| metal dependent hydrolase [Fusobacterium nucleatum ChDC F128]
Length = 620
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 22/156 (14%)
Query: 19 FLTHLHSDHTQGLSSAWAR----GPLFCSRLTAKLFPLKFP--GLDLSLIRVLDIGSWHS 72
F+TH H DH G+ + + ++ +LT L KF G+ +L +++++GS
Sbjct: 131 FVTHGHEDHIGGIPYLYEKIEKDTVIYAGKLTNALIKSKFENFGVKKTLPKMVEVGSRSK 190
Query: 73 ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE---ASNER 129
+SV G+ VE + + H + S L + G + TGDF+ + NE+
Sbjct: 191 VSV-----GKYFTVEFVKV--THS---IADSYCLSIKTPAGHVFLTGDFKIDLTPVDNEK 240
Query: 130 AEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSR 165
+ R + L ++ VD++ D+T PS
Sbjct: 241 VDFMR---LSELGEEGVDLMLSDSTNSEVEGFTPSE 273
>gi|67459068|ref|YP_246692.1| hypothetical protein RF_0676 [Rickettsia felis URRWXCal2]
gi|67004601|gb|AAY61527.1| Conserved hypothetical protein [Rickettsia felis URRWXCal2]
Length = 560
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 16/151 (10%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65
++++ + LTH H DH G+ W + P++ + TA ++ D +
Sbjct: 64 IEKYKKDIVGLILTHAHEDHLGGVQYLWNSLKCPIYTTTFTANFLKIRLNEYDFA----- 118
Query: 66 DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVM--LLFRGDFGCLLYTGDFRW 123
+I + G K +E +++ P M ++ R D G +L+TGD+++
Sbjct: 119 -----KNIKIHEVKPGSKINLESFSLEM--VPLTHSAPEMQAVMIRTDAGNILHTGDWKF 171
Query: 124 EASNERAEIGRNTLVKALKDDVVDILYLDNT 154
+ + L+K+ D+ V L D+T
Sbjct: 172 DNDPVLGKKADEELLKSYGDEGVLALVCDST 202
>gi|395781518|ref|ZP_10461936.1| hypothetical protein MCY_00333 [Bartonella rattimassiliensis 15908]
gi|395420951|gb|EJF87209.1| hypothetical protein MCY_00333 [Bartonella rattimassiliensis 15908]
Length = 558
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 19 FLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
LTH H DH + W + P++C+ TA L +K + D S H IS+
Sbjct: 75 ILTHAHEDHYGAVLDLWPKLQVPIYCTPFTAGLLEIK---------KQADFES-HKISLT 124
Query: 77 SPSSGEKTFV---EVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIG 133
+G+ V V AI NH + SV L G +++TGD++ + + ++
Sbjct: 125 IFQAGDCFQVGSFSVEAIAVNHS---IPESVSLAITTSLGTVVHTGDWKIDHTPSFGDLT 181
Query: 134 RNTLVKALKDDVVDILYLDNTYCNSSYAFPSRE 166
+AL + V L D+T PS +
Sbjct: 182 NEKRFRALGNKGVLALLCDSTNACRDGISPSEQ 214
>gi|449136462|ref|ZP_21771846.1| metallo-beta-lactamase family protein [Rhodopirellula europaea 6C]
gi|448884887|gb|EMB15355.1| metallo-beta-lactamase family protein [Rhodopirellula europaea 6C]
Length = 519
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 25/157 (15%)
Query: 14 GSQVYFLTHLHSDHTQGLSSAWARG---PLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSW 70
G Q LTH+H DH + A G P+ CS TAKL P L + L IG
Sbjct: 128 GIQALLLTHVHIDHAGRIPYLLAAGFDHPILCSAPTAKLLP-------LVMEDALKIGFT 180
Query: 71 HSISVVSPSSGE--KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNE 128
S ++ G+ K V + + CPG G V LL G +L + F E +
Sbjct: 181 RSKRLIKQFLGQIRKLLVPLPYHRWHDCPG--GVKVRLL---PAGHVLGSTMFEIELPDG 235
Query: 129 RAEI-------GRNTLVK-ALKDDVVDILYLDNTYCN 157
R + G N L+ + + D+L L++TY +
Sbjct: 236 RRAVFSGDVGAGTNPLLNPPVSPERADLLVLESTYGD 272
>gi|383483957|ref|YP_005392870.1| Putative hydrolase of the metallo-beta-lactamase superfamily
protein [Rickettsia parkeri str. Portsmouth]
gi|378936311|gb|AFC74811.1| Putative hydrolase of the metallo-beta-lactamase superfamily
protein [Rickettsia parkeri str. Portsmouth]
Length = 560
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSL-IRV 64
++++ + LTH H DH G+ W R P++ + TA ++ D + I++
Sbjct: 64 IEKYKKDIVGLILTHAHEDHLGGVQYLWNRLKCPIYITTFTANFLKIRLNEYDFAKNIKI 123
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
++ I++ P S +E++ + + P + ++ R D G +L+TGD++++
Sbjct: 124 HEVKPGSKINL-DPFS-----LEMVPL-THSAPEMQA----IMIRTDAGNILHTGDWKFD 172
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNT 154
+ L+K+ D+ V L D+T
Sbjct: 173 NDPILGKKADEELLKSYGDEGVLALVCDST 202
>gi|15892536|ref|NP_360250.1| hypothetical protein RC0613 [Rickettsia conorii str. Malish 7]
gi|238650288|ref|YP_002916140.1| hypothetical protein RPR_00585 [Rickettsia peacockii str. Rustic]
gi|374319299|ref|YP_005065798.1| Putative hydrolase of the metallo-beta-lactamase superfamily
[Rickettsia slovaca 13-B]
gi|383751269|ref|YP_005426370.1| Putative hydrolase of the metallo-beta-lactamase superfamily
protein [Rickettsia slovaca str. D-CWPP]
gi|15619697|gb|AAL03151.1| unknown [Rickettsia conorii str. Malish 7]
gi|238624386|gb|ACR47092.1| hypothetical protein RPR_00585 [Rickettsia peacockii str. Rustic]
gi|360041848|gb|AEV92230.1| Putative hydrolase of the metallo-beta-lactamase superfamily
[Rickettsia slovaca 13-B]
gi|379774283|gb|AFD19639.1| Putative hydrolase of the metallo-beta-lactamase superfamily
protein [Rickettsia slovaca str. D-CWPP]
Length = 560
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSL-IRV 64
++++ + LTH H DH G+ W R P++ + TA ++ D + I++
Sbjct: 64 IEKYKKDIVGLILTHAHEDHLGGVQYLWNRLKCPIYITTFTANFLKIRLNEYDFAKNIKI 123
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
++ I++ P S +E++ + + P + ++ R D G +L+TGD++++
Sbjct: 124 HEVKPGSKINL-DPFS-----LEMVPL-THSAPEMQA----IMIRTDAGNILHTGDWKFD 172
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNT 154
+ L+K+ D+ V L D+T
Sbjct: 173 NDPILGKKADEELLKSYGDEGVLALVCDST 202
>gi|269959052|ref|YP_003328841.1| ribonuclease [Anaplasma centrale str. Israel]
gi|269848883|gb|ACZ49527.1| putative ribonuclease [Anaplasma centrale str. Israel]
Length = 542
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 18/139 (12%)
Query: 20 LTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
LTH H DH + WA R P++ ++ TA L K +S+ I V
Sbjct: 71 LTHAHEDHIGAIPYLWADLRCPVYTTKFTAALLKAKLAQFSMSV----------PIEEVD 120
Query: 78 PSSGEKT--FVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRN 135
P+S + FV + P + +V DFG +L+TGD++ + +
Sbjct: 121 PASKLELGPFVLEFVHMTHSTPEMHAVAV----HTDFGSVLHTGDWKLDTDPVVGPVSDV 176
Query: 136 TLVKALKDDVVDILYLDNT 154
+K L DD + + D+T
Sbjct: 177 EKLKRLGDDGLLAVISDST 195
>gi|319407252|emb|CBI80891.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 558
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 19 FLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVV 76
LTH H DH + W + P++C+ TA L K R LD +H I V
Sbjct: 75 ILTHAHEDHYGAVLDLWPKLKIPIYCTCFTAGLLESK---------RQLDF-EFHEIPVN 124
Query: 77 SPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNT 136
SG+ + +I+A + +V L G +++TGD++ + + I
Sbjct: 125 IFQSGDCFQIGPFSIEAISVNHSIPEAVSLAITTSLGNVIHTGDWKIDHTPSLGPITDEE 184
Query: 137 LVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+AL + V L D+T PS + + I
Sbjct: 185 RFRALGNKGVLALLCDSTNALQDGISPSEQQVQKSI 220
>gi|379712369|ref|YP_005300708.1| hypothetical protein RSA_03410 [Rickettsia philipii str. 364D]
gi|376329014|gb|AFB26251.1| hypothetical protein RSA_03410 [Rickettsia philipii str. 364D]
Length = 560
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSL-IRV 64
++++ + LTH H DH G+ W R P++ + TA ++ D + I++
Sbjct: 64 IEKYKKDIVGLILTHAHEDHLGGVQYLWNRLKCPIYSTTFTANFLKIRLNEYDFAKNIKI 123
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
++ I++ P S +E++ + + P + ++ R D G +L+TGD++++
Sbjct: 124 HEVKPGSKINL-DPFS-----LEMVPL-THSAPEMQA----IMIRTDAGNILHTGDWKFD 172
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNT 154
+ L+K+ D+ V L D+T
Sbjct: 173 NDPILGKKADEELLKSYGDEGVLALVCDST 202
>gi|229586723|ref|YP_002845224.1| Putative hydrolase of the metallo-beta-lactamase superfamily
[Rickettsia africae ESF-5]
gi|228021773|gb|ACP53481.1| Putative hydrolase of the metallo-beta-lactamase superfamily
[Rickettsia africae ESF-5]
Length = 560
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWAR--GPLFCSRLTAKLFPLKFPGLDLSL-IRV 64
++++ + LTH H DH G+ W R P++ + TA ++ D + I++
Sbjct: 64 IEKYKKDIVGLILTHAHEDHLGGVQYLWHRLKCPIYITTFTANFLKIRLNEYDFAKNIKI 123
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
++ I++ P S +E++ + + P + ++ R D G +L+TGD++++
Sbjct: 124 HEVKPGSKINL-DPFS-----LEMVPL-THSAPEMQA----IMIRTDAGNILHTGDWKFD 172
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNT 154
+ L+K+ D+ V L D+T
Sbjct: 173 NDPILGKKADEELLKSYGDEGVLALVCDST 202
>gi|341583840|ref|YP_004764331.1| hypothetical protein Rh054_03455 [Rickettsia heilongjiangensis 054]
gi|340808066|gb|AEK74654.1| hypothetical protein Rh054_03455 [Rickettsia heilongjiangensis 054]
Length = 560
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSL-IRV 64
++++ + LTH H DH G+ W + P++ + TA ++ D + I++
Sbjct: 64 IEKYKKDIVGLILTHAHEDHLGGVQYLWNSLKCPIYTTTFTANFLKIRLNEYDFAKNIKI 123
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
++ I++ P S +E++ + + P + ++ R D G +L+TGD++++
Sbjct: 124 HEVKPGSKINL-DPFS-----LEMVPL-THSAPEMQA----IMIRTDAGNILHTGDWKFD 172
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNT 154
+ L+K+ D+ V L D+T
Sbjct: 173 NDPILGQKANEELLKSYGDEGVLALVCDST 202
>gi|372271224|ref|ZP_09507272.1| beta-lactamase domain-containing protein [Marinobacterium
stanieri S30]
Length = 541
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 12 TEGSQVYFLTHLHSDHT---QGLSSAWARGPLFCSRLTAKLFPL 52
EG +TH+H DH GL +A RGP+ CS+ +A L PL
Sbjct: 55 VEGVLALIVTHVHIDHVGRIPGLLAAGFRGPIICSQPSAHLLPL 98
>gi|223938585|ref|ZP_03630476.1| DNA ligase I, ATP-dependent Dnl1 [bacterium Ellin514]
gi|223892704|gb|EEF59174.1| DNA ligase I, ATP-dependent Dnl1 [bacterium Ellin514]
Length = 927
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 31/160 (19%)
Query: 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSIS 74
++ F++H HSDHT + S T+K R+ H +
Sbjct: 31 AETVFISHAHSDHTA------PHREVILSEPTSKFM----------FARIGGTRQEHILK 74
Query: 75 VVSPSSGE--KTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEI 132
P++ E T ++ + A H G S M L + LLYTGDF+ S AE+
Sbjct: 75 FGQPATYEYNGTGYQITLVPAGHIFG----SAMSLVEAEGQSLLYTGDFKLRPSRS-AEL 129
Query: 133 GRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
+ DIL ++ T+ SY FP + Q +
Sbjct: 130 --------CEPRPADILIMETTFGRPSYQFPPTDEVMQGV 161
>gi|332707235|ref|ZP_08427288.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Moorea producens 3L]
gi|332353969|gb|EGJ33456.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Moorea producens 3L]
Length = 543
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 15 SQVYFLTHLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWH 71
+ + +H HSDH+QG L + + P++ S +T +L L +P L I +
Sbjct: 61 ADLVLCSHAHSDHSQGLLALHQTFPQLPIYASEVTTQLLLLNWPELPPEDI----LPFCQ 116
Query: 72 SISVVSPSSGEKTFVEVIA---IDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNE 128
++ V+P F E + A H PG + R LLYTGDF SN
Sbjct: 117 ALPWVTPVE----FCEGLTAQLFPAGHLPGAAAFLLTYTTRHRTYRLLYTGDFF--LSNS 170
Query: 129 RAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQI 172
R G + +++L+ D++ ++ +Y + + P R Q+
Sbjct: 171 RLVEGLS--LESLRGTQPDVVIVEGSYGTARH--PHRRQQENQL 210
>gi|402772300|ref|YP_006591837.1| RNA-metabolising metallo-beta-lactamase [Methylocystis sp. SC2]
gi|401774320|emb|CCJ07186.1| RNA-metabolising metallo-beta-lactamase [Methylocystis sp. SC2]
Length = 556
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
Query: 20 LTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSPS 79
+TH H DH GL++ W RL K+F F L + R+ + G+ I +
Sbjct: 75 ITHAHEDHIGGLATLW-------PRLKCKVFATPFAAGLLEVRRLNEPGA-PKIDISLTH 126
Query: 80 SGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVK 139
+G K ++ ++ + + L R G LL+TGD++ + ++
Sbjct: 127 AGAKLDLDPFQVEYVAVAHSIPEANALAIRTPLGLLLHTGDWKIDPQPGVGTRIDEARLR 186
Query: 140 ALKDDVVDILYLDNT 154
AL D+ V L D+T
Sbjct: 187 ALGDEGVTALICDST 201
>gi|441506137|ref|ZP_20988114.1| Metallo-beta-lactamase family protein, RNA-specific [Photobacterium
sp. AK15]
gi|441426276|gb|ELR63761.1| Metallo-beta-lactamase family protein, RNA-specific [Photobacterium
sp. AK15]
Length = 470
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 38/173 (21%)
Query: 16 QVYFLTHLHSDHTQGLS---SAWARGPLFCSRLTAKLFPL------------------KF 54
Q LTH H DH L +A RGP++ + TA L P+ +F
Sbjct: 60 QALLLTHCHIDHVGRLPWLLAAGFRGPIYATEATAALLPMMLEDGLKILLGLNRSQCERF 119
Query: 55 PGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC 114
G+ SL++ + + +V P E + +I A H ILG + + L D
Sbjct: 120 TGIVKSLVKPIPYDC--RVQLVLP---EGDRMSLIFRPAGH---ILGSAYIELQLPDGKS 171
Query: 115 LLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSY-AFPSRE 166
++++GD G LV + + DIL L++TY + + A RE
Sbjct: 172 VVFSGDL--------GPSGTPLLVDPISPESADILVLESTYGDRCHSAISQRE 216
>gi|157964525|ref|YP_001499349.1| metallo-beta-lactamase family hydrolase [Rickettsia massiliae MTU5]
gi|157844301|gb|ABV84802.1| Putative hydrolase of the metallo-beta-lactamase superfamily
[Rickettsia massiliae MTU5]
Length = 561
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Query: 8 VDRWTEGSQVYFLTHLHSDHTQGLSSAWA--RGPLFCSRLTAKLFPLKFPGLDLSL-IRV 64
++++ + LTH H DH G+ W + P++ + TA + D + I++
Sbjct: 65 IEKYKKDIVGLILTHAHEDHLGGVQYLWNSLKCPIYTTTFTANFLKFRLNEYDFAKNIKI 124
Query: 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124
++ I++ + F+E++ + + P + ++ R D G +L+TGD++++
Sbjct: 125 HEVKPGSKINL------DPFFLEMVPL-THSAPEMQA----IMIRTDAGNILHTGDWKFD 173
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNT 154
+ +K+ D+ V L D+T
Sbjct: 174 NDPILGKKADEEFLKSYGDEGVLALVCDST 203
>gi|434386396|ref|YP_007097007.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Chamaesiphon minutus PCC 6605]
gi|428017386|gb|AFY93480.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Chamaesiphon minutus PCC 6605]
Length = 538
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 21 THLHSDHTQG---LSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77
+H H+DH +G L A+ + P++ S +T+ L PL + LD D +S
Sbjct: 64 SHAHADHARGLLDLHRAFPQLPIYTSEVTSHLLPLNW--LD-------DKADVPHLSQAL 114
Query: 78 PSSGEKTFVEVIAID---ANHCPGILGCSVMLLFRGDFG--CLLYTGDFRWEASNERAEI 132
P F + ++ + A H PG +V+L + G + + YTGDF SN R
Sbjct: 115 PWRRSIEFADGLSAELFPAGHLPG--AAAVLLTYTGFYQSYSIFYTGDFFL--SNSRLVE 170
Query: 133 GRNTLVKALKDDVVDILYLDNTY 155
G + + A+++ D+L ++ +Y
Sbjct: 171 GLH--LDAIRNLNPDVLIIEGSY 191
>gi|307152692|ref|YP_003888076.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC 7822]
gi|306982920|gb|ADN14801.1| beta-lactamase domain protein [Cyanothece sp. PCC 7822]
Length = 546
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 12 TEGSQVYFLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIG 68
T + + F +H H DH +GL S A+ + P++ S +T +L PL + + I G
Sbjct: 57 TPPAHLVFCSHAHGDHARGLLSLHQAFPQMPIYASEVTLELLPLNWLDHSHTSIPAFCQG 116
Query: 69 -SWHS-ISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGC--LLYTGDFRWE 124
W + I++ S E A H PG +++L ++ + YTGDF
Sbjct: 117 LQWRTPINLFKDLSAE-------IFPAGHLPG--AAAILLTYKTAKRTYKVFYTGDF--- 164
Query: 125 ASNERAEIGRNTLVKALKDDVVDILYLDNTY 155
S ++ V+ L+ D+L ++ TY
Sbjct: 165 -SLSNFQLVEGLSVELLRGLAPDVLIIEGTY 194
>gi|254422627|ref|ZP_05036345.1| metallo-beta-lactamase superfamily protein [Synechococcus sp. PCC
7335]
gi|196190116|gb|EDX85080.1| metallo-beta-lactamase superfamily protein [Synechococcus sp. PCC
7335]
Length = 554
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 19 FLTHLHSDHTQGLSS---AWARGPLFCSRLTAKLFPLKFPGL-DLSLIRVLDIGSWHSIS 74
F +H H+DH +GL S + P+F S +T +L PL +PG D + R L W S
Sbjct: 50 FCSHAHTDHIRGLLSLHRTFPLLPIFASDVTTRLLPLNWPGQSDANFCRSL---PWRSPV 106
Query: 75 VVSPSSGEKTFVEVIAIDANHCPG 98
++P + V A H PG
Sbjct: 107 EIAPG------LSVQLWPAGHMPG 124
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,321,394,026
Number of Sequences: 23463169
Number of extensions: 263279632
Number of successful extensions: 532785
Number of sequences better than 100.0: 884
Number of HSP's better than 100.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 510
Number of HSP's that attempted gapping in prelim test: 529984
Number of HSP's gapped (non-prelim): 1662
length of query: 403
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 258
effective length of database: 8,957,035,862
effective search space: 2310915252396
effective search space used: 2310915252396
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)