Query 040718
Match_columns 403
No_of_seqs 272 out of 1973
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 17:54:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040718.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040718hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b87_A DNA cross-LINK repair 1 100.0 2.2E-45 7.6E-50 369.9 27.3 277 2-331 35-366 (367)
2 3zdk_A 5' exonuclease apollo; 100.0 5.2E-40 1.8E-44 327.1 27.5 254 2-312 8-302 (336)
3 3zq4_A Ribonuclease J 1, RNAse 99.9 1.8E-26 6E-31 243.6 16.1 315 14-361 66-440 (555)
4 2i7t_A Cleavage and polyadenyl 99.9 1.7E-24 5.8E-29 222.8 17.9 135 14-171 63-221 (459)
5 2az4_A Hypothetical protein EF 99.9 1.2E-23 4E-28 214.2 23.3 138 15-171 85-243 (429)
6 3bk2_A RNAse J, metal dependen 99.9 3.1E-24 1.1E-28 226.7 17.3 142 15-170 75-229 (562)
7 3af5_A Putative uncharacterize 99.9 1.7E-22 5.7E-27 217.0 21.7 135 15-171 249-411 (651)
8 2ycb_A Beta-CAsp RNAse, cleava 99.9 1.6E-22 5.6E-27 216.4 21.0 136 14-171 234-396 (636)
9 2xr1_A Cleavage and polyadenyl 99.9 1.3E-22 4.5E-27 217.3 19.6 135 15-171 238-399 (640)
10 3iek_A Ribonuclease TTHA0252; 99.9 7.8E-22 2.7E-26 202.0 18.9 144 3-171 23-203 (431)
11 3g1p_A Protein PHNP; C-P lyase 99.7 1.2E-16 4.1E-21 151.7 13.4 141 3-169 48-207 (258)
12 1zkp_A Hypothetical protein BA 99.6 8.7E-16 3E-20 145.9 12.7 129 3-159 52-206 (268)
13 3md7_A Beta-lactamase-like; ss 99.6 1.6E-15 5.4E-20 146.8 13.1 138 5-171 79-249 (293)
14 2i7x_A Protein CFT2; polyadeny 99.6 1.4E-15 4.7E-20 164.8 13.0 139 14-166 53-225 (717)
15 2cbn_A Ribonuclease Z; phospho 99.6 9.5E-16 3.3E-20 148.0 10.4 130 3-158 33-239 (306)
16 1y44_A Ribonuclease Z; zinc-de 99.6 6.1E-16 2.1E-20 150.6 7.9 130 3-158 31-237 (320)
17 2e7y_A TRNAse Z; tRNA maturati 99.6 2.1E-15 7.3E-20 143.1 8.7 128 4-158 20-214 (280)
18 3jxp_A Coenzyme PQQ synthesis 99.5 2.9E-14 9.8E-19 140.6 11.2 126 14-157 82-227 (321)
19 3rpc_A Possible metal-dependen 99.5 1.6E-13 5.6E-18 130.7 11.2 119 14-158 64-196 (264)
20 3kl7_A Putative metal-dependen 99.4 1E-12 3.6E-17 123.5 12.1 119 3-154 46-183 (235)
21 3zwf_A Zinc phosphodiesterase 99.4 1.3E-12 4.5E-17 130.9 13.6 140 3-158 28-279 (368)
22 2wyl_A L-ascorbate-6-phosphate 99.4 7.8E-12 2.7E-16 124.5 15.3 119 14-154 109-250 (360)
23 3m8t_A 'BLR6230 protein; subcl 99.4 1.9E-12 6.3E-17 123.8 10.1 109 2-124 63-206 (294)
24 1k07_A FEZ-1 beta-lactamase; m 99.3 7.6E-12 2.6E-16 118.2 12.2 107 3-123 34-177 (263)
25 3bv6_A Metal-dependent hydrola 99.3 9.9E-12 3.4E-16 124.8 13.6 120 14-155 133-276 (379)
26 3dha_A N-acyl homoserine lacto 99.3 2.7E-11 9.3E-16 113.5 12.1 95 15-126 101-201 (254)
27 2r2d_A AGR_PTI_140P, Zn-depend 99.3 2.4E-11 8.1E-16 115.2 11.3 97 15-125 104-218 (276)
28 3l6n_A Metallo-beta-lactamase; 99.2 2.3E-11 7.8E-16 111.4 9.9 104 2-124 39-162 (219)
29 1e5d_A Rubredoxin\:oxygen oxid 99.2 1.9E-11 6.3E-16 122.3 9.5 104 3-123 43-168 (402)
30 1sml_A Protein (penicillinase) 99.2 9.3E-11 3.2E-15 111.1 12.6 109 3-125 47-189 (269)
31 2xf4_A Hydroxyacylglutathione 99.2 2E-11 6.9E-16 111.2 7.5 106 3-125 24-156 (210)
32 3adr_A Putative uncharacterize 99.2 2.9E-11 9.8E-16 113.5 8.6 104 3-124 29-169 (261)
33 3hnn_A Putative diflavin flavo 99.2 2.7E-11 9.3E-16 115.0 8.4 102 3-121 51-175 (262)
34 1vjn_A Zn-dependent hydrolase 99.2 1.7E-10 5.8E-15 107.5 13.2 107 3-154 29-147 (220)
35 2ohh_A Type A flavoprotein FPR 99.2 5.7E-11 2E-15 118.8 10.6 92 14-122 75-172 (404)
36 1ycg_A Nitric oxide reductase; 99.2 7.6E-11 2.6E-15 117.6 10.8 103 4-123 45-169 (398)
37 4ax1_B Metallo-beta-lactamase 99.2 1.6E-10 5.4E-15 110.5 12.1 109 2-124 66-210 (303)
38 3esh_A Protein similar to meta 99.2 5.5E-11 1.9E-15 113.6 8.4 102 15-126 101-212 (280)
39 3tp9_A Beta-lactamase and rhod 99.2 3.5E-11 1.2E-15 123.8 7.5 108 3-126 27-155 (474)
40 1ztc_A Hypothetical protein TM 99.1 7.4E-11 2.5E-15 109.1 8.6 104 3-125 44-179 (221)
41 4efz_A Metallo-beta-lactamase 99.1 9.2E-11 3.1E-15 113.5 9.3 98 14-126 64-180 (298)
42 1m2x_A Class B carbapenemase B 99.1 1.2E-10 4.1E-15 107.3 9.4 103 3-124 36-158 (223)
43 4hl2_A Beta-lactamase NDM-1; s 99.1 3.2E-11 1.1E-15 112.6 5.4 111 3-124 57-185 (243)
44 1xm8_A Glyoxalase II; structur 99.1 9.2E-11 3.2E-15 111.5 8.5 98 4-125 24-136 (254)
45 2gcu_A Putative hydroxyacylglu 99.1 8.3E-11 2.8E-15 111.1 7.5 98 3-125 28-147 (245)
46 3aj3_A MLR6805 protein, 4-pyri 99.1 1.4E-10 4.7E-15 109.9 8.9 93 15-125 89-212 (274)
47 1a7t_A Metallo-beta-lactamase; 99.1 1.4E-10 4.7E-15 107.7 8.2 103 3-124 46-168 (232)
48 2zo4_A Metallo-beta-lactamase 99.1 3.1E-10 1.1E-14 109.7 10.7 95 15-125 63-195 (317)
49 1qh5_A Glyoxalase II, protein 99.1 1.7E-10 5.9E-15 110.0 8.7 98 3-125 23-139 (260)
50 4ad9_A Lactb2, beta-lactamase- 99.1 4.5E-10 1.6E-14 107.6 10.8 105 2-124 40-169 (289)
51 3r2u_A Metallo-beta-lactamase 99.1 1.6E-10 5.4E-15 119.1 8.1 107 3-126 48-175 (466)
52 2vw8_A PA1000, PQSE; quinolone 99.1 2.1E-10 7.3E-15 110.6 8.5 105 3-123 34-183 (303)
53 1p9e_A Methyl parathion hydrol 99.1 2.4E-10 8E-15 112.5 8.7 94 15-125 140-260 (331)
54 2q9u_A A-type flavoprotein; fl 99.1 2.5E-10 8.5E-15 114.9 8.8 104 3-123 49-174 (414)
55 2qed_A Hydroxyacylglutathione 99.0 3.9E-10 1.3E-14 107.4 9.0 95 3-125 29-139 (258)
56 2y8b_A Metallo-B-lactamase; hy 99.0 3.3E-10 1.1E-14 107.7 8.6 107 3-125 77-202 (265)
57 2zwr_A Metallo-beta-lactamase 99.0 2.6E-10 8.9E-15 104.0 7.2 102 3-125 22-149 (207)
58 1mqo_A Beta-lactamase II; alph 99.0 3.6E-10 1.2E-14 104.3 8.3 103 3-124 50-172 (227)
59 2fhx_A SPM-1; metallo-beta-lac 99.0 4.9E-10 1.7E-14 104.3 8.8 105 4-124 41-188 (246)
60 1jjt_A IMP-1 metallo beta-lact 99.0 2E-10 6.9E-15 106.4 5.2 102 3-124 42-162 (228)
61 2p18_A Glyoxalase II; metallop 99.0 8.3E-10 2.9E-14 108.0 8.4 87 15-125 85-185 (311)
62 3iog_A Beta-lactamase; hydrola 98.9 1.4E-09 4.9E-14 99.6 7.1 106 2-124 31-169 (227)
63 4dik_A Flavoprotein; TM0755, e 98.9 4.4E-09 1.5E-13 107.0 10.5 101 2-123 60-183 (410)
64 3q6v_A Beta-lactamase; metallo 98.9 1.6E-09 5.6E-14 99.6 5.9 109 2-125 34-173 (233)
65 4eyb_A Beta-lactamase NDM-1; m 98.8 2.7E-09 9.3E-14 101.8 5.3 114 2-126 83-214 (270)
66 2bib_A CBPE, teichoic acid pho 98.8 2.1E-08 7.2E-13 104.9 10.7 119 15-151 78-226 (547)
67 2cfu_A SDSA1; SDS-hydrolase, l 98.6 1.3E-07 4.5E-12 101.5 11.9 108 2-125 131-304 (658)
68 2p97_A Hypothetical protein; p 98.6 5.6E-08 1.9E-12 88.3 7.1 97 2-125 32-142 (201)
69 2yhe_A SEC-alkyl sulfatase; hy 97.4 2.7E-07 9.2E-12 99.2 0.0 103 15-124 172-314 (668)
70 2p4z_A Metal-dependent hydrola 98.1 7.1E-07 2.4E-11 85.7 2.0 46 3-48 42-105 (284)
71 3h3e_A Uncharacterized protein 96.6 0.00068 2.3E-08 64.9 2.5 31 16-47 63-93 (267)
72 3kl7_A Putative metal-dependen 68.8 5.3 0.00018 36.3 4.9 46 286-335 185-230 (235)
73 3rpc_A Possible metal-dependen 52.5 22 0.00074 32.5 6.0 50 286-335 202-252 (264)
74 1vjn_A Zn-dependent hydrolase 50.4 13 0.00044 33.4 4.0 29 286-314 149-177 (220)
75 3md7_A Beta-lactamase-like; ss 35.2 26 0.00088 32.6 3.6 31 284-314 236-266 (293)
76 1zkp_A Hypothetical protein BA 34.5 50 0.0017 29.8 5.4 27 288-314 213-239 (268)
77 3bv6_A Metal-dependent hydrola 30.1 57 0.0019 31.6 5.2 42 286-328 282-325 (379)
78 2wyl_A L-ascorbate-6-phosphate 29.2 61 0.0021 31.0 5.3 43 286-329 257-301 (360)
79 3g1p_A Protein PHNP; C-P lyase 29.2 30 0.001 31.3 2.9 27 286-312 198-224 (258)
80 1y44_A Ribonuclease Z; zinc-de 28.0 83 0.0028 29.1 5.8 30 285-314 244-273 (320)
81 2e7y_A TRNAse Z; tRNA maturati 25.1 46 0.0016 30.0 3.3 28 286-313 220-247 (280)
82 2cbn_A Ribonuclease Z; phospho 21.5 57 0.002 29.9 3.3 30 285-314 246-275 (306)
No 1
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=100.00 E-value=2.2e-45 Score=369.85 Aligned_cols=277 Identities=30% Similarity=0.493 Sum_probs=215.3
Q ss_pred CCCeEEEcCCCC----CccEEEEcCCchhhhCCccccCCCCcEEeCHhhHhhccccCCCCCccceEeccCCCeEEEEeec
Q 040718 2 EKGLISVDRWTE----GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77 (403)
Q Consensus 2 ~~~~i~VD~f~~----~i~aifLTH~H~DHi~GL~~~~~~~pIy~s~~T~~lL~~~~~~~~~~~i~~l~~~~~~~i~l~~ 77 (403)
++..|+||+|+. .+++|||||+|.||++||+.. .++||||++.|++++...+. .....+.+++.++++.+
T Consensus 35 pG~~ilVD~f~~~~~~~IdaI~lTH~H~DHiggl~~~-~~~pIy~s~~t~~ll~~~l~-~~~~~~~~l~~g~~~~i---- 108 (367)
T 4b87_A 35 PGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKH-FTFPVYCSEITGNLLKNKLH-VQEQYIHPLPLDTECIV---- 108 (367)
T ss_dssp TTSSEEESCCSSSSCTTCCEEECCCCCHHHHTTCSTT-CCSCEEECHHHHHHHHHHSC-CCGGGEEECCBTSCEEE----
T ss_pred CCCeEEEeCCCcCCccCCcEEEECcChHHHhCCcccc-cCCcEEECHHHHHHHHHHhc-cccceEEEeCCCCEEEE----
Confidence 455799999983 689999999999999999964 57899999999999987663 44456788899999887
Q ss_pred CCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCe-eEEEECCcCcCCCchhhhccchhhhhhccCCCccEEEEcCCCC
Q 040718 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG-CLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYC 156 (403)
Q Consensus 78 ~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~-~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvLilD~Ty~ 156 (403)
++++|+++++||+|| |++|+|+.+++ +++||||+++.+.+ ....+...++|+||+||||+
T Consensus 109 ------g~~~v~~~~agH~~g----s~~~~i~~~~g~~il~tGD~~~~~~~---------~~~~l~~~~~D~Li~EsTy~ 169 (367)
T 4b87_A 109 ------NGVKVVLLDANHCPG----AVMILFYLPNGTVILHTGDFRADPSM---------ERSLLADQKVHMLYLDTTYC 169 (367)
T ss_dssp ------TTEEEEEEECSSSTT----CEEEEEECTTSCEEEECCSCCCCGGG---------GGSGGGTSCCCEEEECCTTC
T ss_pred ------CCEEEEEEeCCCcCC----cEEEEEEcCCCcEEEEecCcccCccc---------chhhhccCCCCEEEEecccC
Confidence 899999999999999 99999997544 69999999998764 12345456899999999999
Q ss_pred CCCCCCCCHHHHHHH----------------------------------------HhhChhhHHHHHHhcccc---cccc
Q 040718 157 NSSYAFPSREVAAQQ----------------------------------------IWVWPERLQTMHLLGFHD---IFTT 193 (403)
Q Consensus 157 ~p~~~fp~~~~~~~~----------------------------------------I~v~~~r~~~l~~LG~~~---ift~ 193 (403)
+|.+.||+++++.++ |++..++++++.+|+.++ +||+
T Consensus 170 ~~~~~~ps~~~~~~~~~~~i~~~~~~~g~~~v~~~a~~igr~q~ll~ia~~~g~ki~v~~~~~~il~~l~~~~~~~~~t~ 249 (367)
T 4b87_A 170 SPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITT 249 (367)
T ss_dssp STTCCCCCHHHHHHHHHHHHHHHHHHCTTEEEEEEESSSCCHHHHHHHHHHTTCCEECCHHHHHHHHTTCCTTHHHHEES
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEccchhHHHHHHHHHHHHhCCEEEEeHHHHHHHHhcCCchhhhhccc
Confidence 999999999887652 234456677888888876 6999
Q ss_pred CCccCeEEEEeccCCcHHHHHHHhh-----hcCceeecCCCcceeeccCCCCCCCCCCCccccccccccccccchhhhhh
Q 040718 194 KTSLTRVRAVPRYSFSIDTLESLNT-----MHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKE 268 (403)
Q Consensus 194 ~~~~~~i~~vp~~~~~~~~l~~l~~-----~~~~igi~ptg~~~~~~~~~g~~~~~~~~~s~~~~~~~~~sGw~~~~~~~ 268 (403)
++..++||++|++.+..++|..+.. +.+.+||+||||.+..+.. +...+
T Consensus 250 d~~~~~vh~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~ptgw~~~~~~~---------~~~~~----------------- 303 (367)
T 4b87_A 250 DMCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFT---------RIADV----------------- 303 (367)
T ss_dssp CGGGCSEEEEEGGGCSHHHHHHHHHSGGGCCCEEEEEEECC-------------------CCC-----------------
T ss_pred CCccceEEEeecCcCCHHHHHHHHHHhhcccccEEEEcCcccccCCCCC---------ccccc-----------------
Confidence 9999999999999988888876432 3457899999976542110 00000
Q ss_pred ccCcceeecceEEeeeccCCCCHHHHHHHHHHhCCCEEEEccCCCCcc-cChh-hHHHHHHhhcC
Q 040718 269 ALGSVDRFHKYIYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCY-VDPL-YYFGRLCRANQ 331 (403)
Q Consensus 269 ~~~~~~r~~~~~~~VpySdHss~~EL~~fV~~~~P~~Vi~tv~~s~~~-~~~~-~~f~~~~~~~~ 331 (403)
.+..+.+...|+|||||||||.||.+||++++|++|||||+..+.. ++.| .||.+|..+.+
T Consensus 304 --~~~~~~~~~~~~vpySeHss~~EL~~fv~~l~p~~iiptv~~~~~~~~~~m~~~~~~w~~~~~ 366 (367)
T 4b87_A 304 --IPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRSTMEKYFREWKLEAG 366 (367)
T ss_dssp --CCEEETTEEEEEECCCSSCCHHHHHHHHHHHCCSEEEECSSCSSHHHHHHHHHHHHHHHHHHC
T ss_pred --ccccCCceEEEEEeccCCCCHHHHHHHHHhcCCCeEECeecCCCHHHHHHHHHHHHHHHhhcC
Confidence 0111224568999999999999999999999999999999876533 3444 88998887654
No 2
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=100.00 E-value=5.2e-40 Score=327.12 Aligned_cols=254 Identities=38% Similarity=0.705 Sum_probs=207.3
Q ss_pred CCCeEEEcCCC----CCccEEEEcCCchhhhCCccccCCCCcEEeCHhhHhhccccCCCCCccceEeccCCCeEEEEeec
Q 040718 2 EKGLISVDRWT----EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVS 77 (403)
Q Consensus 2 ~~~~i~VD~f~----~~i~aifLTH~H~DHi~GL~~~~~~~pIy~s~~T~~lL~~~~~~~~~~~i~~l~~~~~~~i~l~~ 77 (403)
.+..|+||+|+ +.++++||||+|.||++||+.++ ++||||++.|+++++.++. .....+.++++++++.++.
T Consensus 8 ~g~~i~vD~f~~~~~~~i~ai~lTH~H~DHiggl~~l~-~~pVy~s~~t~~ll~~~l~-~~~~~~~~~~~~~~~~i~~-- 83 (336)
T 3zdk_A 8 PHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTW-ARPLYCSPITAHLLHRHLQ-VSKQWIQALEVGESHVLPL-- 83 (336)
T ss_dssp TTSSEEESCCCHHHHCSSCEEECCCCCGGGSTTCSTTC-CSCEEECHHHHHHHHHHHC-CCTTTEEECCTTSEEEEES--
T ss_pred CCCCEeecCCcccCCCCCCEEEECCChHHHHCchHHHc-CCCEEecHHHHHHHHHhhh-hcccceEecCCCCeEEecC--
Confidence 45689999999 47999999999999999999976 7999999999999987764 3334678888998887631
Q ss_pred CCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCeeEEEECCcCcCCCchhhhccchhhhhhccCCCccEEEEcCCCCC
Q 040718 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCN 157 (403)
Q Consensus 78 ~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvLilD~Ty~~ 157 (403)
+....++++|+++++||+|| |++|+|+.++++|+||||+++.++.... ..+. ...++|+||+||||++
T Consensus 84 -~~~~~g~~~v~~~~~~H~~g----s~~~~i~~~~~~i~~tGD~~~~~~~~~~-----~~l~--~~~~vD~Li~DsT~~~ 151 (336)
T 3zdk_A 84 -DEIGQETMTVTLLDANHCPG----SVMFLFEGYFGTILYTGDFRYTPSMLKE-----PALT--LGKQIHTLYLDNTNCN 151 (336)
T ss_dssp -SSSSSCEEEEEEEECSSSTT----CEEEEEEETTEEEEECCSCCCCGGGGGC-----GGGS--SCCCCSEEEECCTBCC
T ss_pred -cccccCCEEEEEEECCCCcc----eEEEEEEeCCceEEEeCCCCCCcccccc-----hhhh--ccCCccEEEEecCCCC
Confidence 11223789999999999999 9999999999999999999988764211 1111 2478999999999999
Q ss_pred CCCCCCCHHHHHHH------------------------------------HhhChhhHHHHHHhccccccccCCccCeEE
Q 040718 158 SSYAFPSREVAAQQ------------------------------------IWVWPERLQTMHLLGFHDIFTTKTSLTRVR 201 (403)
Q Consensus 158 p~~~fp~~~~~~~~------------------------------------I~v~~~r~~~l~~LG~~~ift~~~~~~~i~ 201 (403)
+.+.+|+++++.+. |++...+++.+++||+.++|+.+...++++
T Consensus 152 ~~~~~pse~~v~~~l~~~i~~~~~g~vii~~f~vgR~q~i~~~a~~~grkV~v~gr~~~~~~~lg~~~~~~~~~~~~~i~ 231 (336)
T 3zdk_A 152 PALVLPSRQEAAHQIVQLIRKHPQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIH 231 (336)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTCTTSEEEEEECSSSCHHHHHHHHHHHTCCEECCHHHHHHHHHTTCCSCEESCGGGCSEE
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHcCCEEEEEhHHHHHHHhcCCccccCCHhHcCCCC
Confidence 99999999887665 223345567778899999999999999999
Q ss_pred EEeccCCcHHHHHHHhhhcCceeecCCCcceeeccCCCCCCCCCCCccccccccccccccchhhhhhccCcceeecceEE
Q 040718 202 AVPRYSFSIDTLESLNTMHPTIGIMPSGLPWVVKPLKGGGSLPGSLFSSYQSKWRATGGTQTEKLKEALGSVDRFHKYIY 281 (403)
Q Consensus 202 ~vp~~~~~~~~l~~l~~~~~~igi~ptg~~~~~~~~~g~~~~~~~~~s~~~~~~~~~sGw~~~~~~~~~~~~~r~~~~~~ 281 (403)
+.++..+...+|..+++.++.++|.|++|++- |+. ..++
T Consensus 232 ~~~~~~i~~~al~r~~~~~~~i~i~~S~~~ip--------------------------g~~---------------~~~~ 270 (336)
T 3zdk_A 232 AVDHMEICHSNMLRWNQTHPTIAILPTSRKIH--------------------------SSH---------------PDIH 270 (336)
T ss_dssp EEEGGGCSHHHHHHHHHHSCEEEEEECSSCCC--------------------------CSS---------------TTEE
T ss_pred cchhheeHHHHHHhhhCcCCeEEEEecccccc--------------------------CCc---------------cCce
Confidence 99987778888888888889999999886531 100 1257
Q ss_pred eeeccCCCCHHHHHHHHHHhCCCEEEEcc-CC
Q 040718 282 SVPYSDHSCFTEIEEFLNLVQPSNIRGIV-SS 312 (403)
Q Consensus 282 ~VpySdHss~~EL~~fV~~~~P~~Vi~tv-~~ 312 (403)
.||||+||||+||++|+++++|+.|+|+| |.
T Consensus 271 ~vh~S~Ha~~~EL~~~~~~~~P~~~iPvh~ge 302 (336)
T 3zdk_A 271 VIPYSDHSSYSELRAFVAALKPCQVVPIVSRR 302 (336)
T ss_dssp EECCCSSCBHHHHHHHHHHHCCSCEEESCTTS
T ss_pred eeEecCCCCHHHHHHHHHHhCCCEEEEEECCc
Confidence 89999999999999999999999999999 64
No 3
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.94 E-value=1.8e-26 Score=243.62 Aligned_cols=315 Identities=17% Similarity=0.166 Sum_probs=190.9
Q ss_pred CccEEEEcCCchhhhCCccccC--CCCcEEeCHhhHhhccccCC--C-CCccceEeccCCCeEEEEeecCCCCCcCceEE
Q 040718 14 GSQVYFLTHLHSDHTQGLSSAW--ARGPLFCSRLTAKLFPLKFP--G-LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEV 88 (403)
Q Consensus 14 ~i~aifLTH~H~DHi~GL~~~~--~~~pIy~s~~T~~lL~~~~~--~-~~~~~i~~l~~~~~~~i~l~~~~~~~~~~v~V 88 (403)
.++++||||+|.||++|++.++ .+.||||++.|++++...+. + .+...+..+..++++.+ ++++|
T Consensus 66 ~Id~I~lTH~H~DHiggl~~l~~~~~~pIy~t~~t~~ll~~~l~~~~~~~~~~~~~v~~g~~~~i----------g~~~v 135 (555)
T 3zq4_A 66 KIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLNIIGEDDIVKF----------RKTAV 135 (555)
T ss_dssp TEEEEEESCCCHHHHTTHHHHHTTCCCCEEECHHHHHHHHHHHHHHSTTTTCCEEECCTTCCEEE----------TTEEE
T ss_pred CCCEEEECCCchhhhCCHHHHHHhcCceEEECHHHHHHHHHHHHHcCccCCCceEEeCCCCEEEE----------CCEEE
Confidence 4689999999999999999863 47899999999998865431 1 12235678888988887 89999
Q ss_pred EEEecCC-CCCCCCceEEEEEEECCeeEEEECCcCcCCCchhhhccchhhhhhccCCCccEEEEcCCCCCCCCCCCCHHH
Q 040718 89 IAIDANH-CPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREV 167 (403)
Q Consensus 89 t~~~A~H-~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvLilD~Ty~~p~~~fp~~~~ 167 (403)
++++++| +|| |++|+|+.++++++||||+++....... ......+..+...++|+|++||||+++....+++++
T Consensus 136 ~~~~~~H~~pg----s~~~~i~~~~~~il~tGD~~~~~~~~~g-~~d~~~l~~l~~~~~d~Li~esT~~~~~~~~~se~~ 210 (555)
T 3zq4_A 136 SFFRTTHSIPD----SYGIVVKTPPGNIVHTGDFKFDFTPVGE-PANLTKMAEIGKEGVLCLLSDSTNSENPEFTMSERR 210 (555)
T ss_dssp EEEEEBCSSSS----EEEEEEEETTEEEEECCSCBCCSSCSSS-CCCHHHHHHHHHTCEEEEEEECTTTTCCSCCCCHHH
T ss_pred EEEeCCCCCcC----cEEEEEEECCcEEEEeCCCCCCCCcCcC-ccCHHHHHHhcccCCcEEEecCcccCCCCCCCCHHH
Confidence 9999988 999 9999999999999999999997653211 011112233334689999999999998777788887
Q ss_pred HHHHHhhC----------------hhhHHHH-HHhccccccccCCccCeEEEEeccCCcHHHHHHHhhhcCceee--cCC
Q 040718 168 AAQQIWVW----------------PERLQTM-HLLGFHDIFTTKTSLTRVRAVPRYSFSIDTLESLNTMHPTIGI--MPS 228 (403)
Q Consensus 168 ~~~~I~v~----------------~~r~~~l-~~LG~~~ift~~~~~~~i~~vp~~~~~~~~l~~l~~~~~~igi--~pt 228 (403)
+.+.|... -.|.+.+ .++ .....+|.+.. .++..+.+..+..|. .|.
T Consensus 211 v~~~i~~~~~~~~grvii~~fasnv~R~q~il~~a--------~~~gr~v~v~g------rs~~~~~~~~~~~g~l~~p~ 276 (555)
T 3zq4_A 211 VGESIHDIFRKVDGRIIFATFASNIHRLQQVIEAA--------VQNGRKVAVFG------RSMESAIEIGQTLGYINCPK 276 (555)
T ss_dssp HHHHHHHHHHHCCSCEEEECCTTCHHHHHHHHHHH--------HTTTCEEEEES------HHHHHHHHHHHGGGSCCCCG
T ss_pred HHHHHHHHHHhCCCEEEEEEChhHHHHHHHHHHHH--------HHHCCEEEEeC------HHHHHHHHHHHHcCCccCCc
Confidence 76654321 1222211 111 01112333221 233333332222232 122
Q ss_pred Ccceeecc---C-CCCCC-C----CCCCccccc---cc----------c-ccccccchhh---hhhcc-Ccceeecc-e-
Q 040718 229 GLPWVVKP---L-KGGGS-L----PGSLFSSYQ---SK----------W-RATGGTQTEK---LKEAL-GSVDRFHK-Y- 279 (403)
Q Consensus 229 g~~~~~~~---~-~g~~~-~----~~~~~s~~~---~~----------~-~~~sGw~~~~---~~~~~-~~~~r~~~-~- 279 (403)
......+. . .++.+ + .|.|.+.+. .. . ...|||+..- ...++ +...+... .
T Consensus 277 ~~~v~~~~~~~~~~~~~vii~tgsqGe~~~~L~r~a~~~~~~~~~~~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~ 356 (555)
T 3zq4_A 277 NTFIEHNEINRMPANKVTILCTGSQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVI 356 (555)
T ss_dssp GGEECGGGTTTSCGGGEEEEECCTTCCTTSHHHHHHSSCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEE
T ss_pred ccEeCHHHHhhCCCCCEEEEeCCCCchHHHHHHHHhcCCCCccccCCCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEE
Confidence 11110000 0 00000 0 011111110 00 0 0124443110 00000 00011111 1
Q ss_pred ---EEeeeccCCCCHHHHHHHHHHhCCCEEEEccCCCCcccChhhHHHHHHhhcCCCcc---ccccccccceeeeeeccc
Q 040718 280 ---IYSVPYSDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLCRANQPPLR---YKQEKRVQHKTVVAAQIK 353 (403)
Q Consensus 280 ---~~~VpySdHss~~EL~~fV~~~~P~~Vi~tv~~s~~~~~~~~~f~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 353 (403)
+..+.+|.|||++||+.+++.++|+.|+|+||. |. -+..++.+.++.|.+.. +-.||...+-+...+++.
T Consensus 357 ~~~~~~~h~SgHa~~~eL~~~~~~~~Pk~~ipvHGe---~~-~~~~~~~~a~~~G~~~~~~~~~~nG~~~~l~~~~~~~~ 432 (555)
T 3zq4_A 357 HGPLNDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGE---YR-MQKMHVKLATDCGIPEENCFIMDNGEVLALKGDEASVA 432 (555)
T ss_dssp CSSSSCCCCCSSCCHHHHHHHHHHSCEEEEEEESBC---HH-HHHHHHHHHHHTTCCGGGBCCCCTTCEEEEETTEEEEC
T ss_pred ecCCcceEEeCCCCHHHHHHHHHHhCCCEEEEcCCC---HH-HHHHHHHHHHHcCCCcccEEEccCCCEEEEeCCCceEe
Confidence 236899999999999999999999999999995 33 23557889999998753 278999987666667788
Q ss_pred cccccCcc
Q 040718 354 FNVESGRS 361 (403)
Q Consensus 354 ~~~~~~~~ 361 (403)
+++++|..
T Consensus 433 ~~v~~g~~ 440 (555)
T 3zq4_A 433 GKIPSGSV 440 (555)
T ss_dssp CCCCCCEE
T ss_pred cEEeeCCE
Confidence 88887753
No 4
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.92 E-value=1.7e-24 Score=222.80 Aligned_cols=135 Identities=20% Similarity=0.320 Sum_probs=100.2
Q ss_pred CccEEEEcCCchhhhCCcccc----CCCCcEEeCHhhHhhccccCC---C----------CC-------ccceEeccCCC
Q 040718 14 GSQVYFLTHLHSDHTQGLSSA----WARGPLFCSRLTAKLFPLKFP---G----------LD-------LSLIRVLDIGS 69 (403)
Q Consensus 14 ~i~aifLTH~H~DHi~GL~~~----~~~~pIy~s~~T~~lL~~~~~---~----------~~-------~~~i~~l~~~~ 69 (403)
.+++|||||+|.||++||+.+ .++++|||++.|.+++...+. . +. ...+.++++++
T Consensus 63 ~Id~VllTH~H~DH~ggl~~l~~~~~~~~~iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (459)
T 2i7t_A 63 EIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHE 142 (459)
T ss_dssp GCCEEECCCSSHHHHTTHHHHHHHSSCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTC
T ss_pred cCcEEEECCCChhhhhhhHHHHHhcCCCCCEEechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCC
Confidence 368999999999999999875 246899999999876542210 0 00 02456778888
Q ss_pred eEEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCeeEEEECCcCcCCCchhhhccchhhhhhccCCCccEE
Q 040718 70 WHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDIL 149 (403)
Q Consensus 70 ~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvL 149 (403)
++.+ ++++|+++++||++| |++|+++.++++++||||+....+.. .....+...++|+|
T Consensus 143 ~~~~----------~gi~v~~~~~GH~~G----s~~~~i~~~~~~il~sGD~~~~~~~~-------~~~~~~~~~~~D~L 201 (459)
T 2i7t_A 143 VKEV----------AGIKFWCYHAGHVLG----AAMFMIEIAGVKLLYTGDFSRQEDRH-------LMAAEIPNIKPDIL 201 (459)
T ss_dssp CEEE----------TTEEEEEEECCSSTT----CEEEEEEETTEEEEECCSCCCC------------CCCCCCSSCCSEE
T ss_pred EEEE----------CCEEEEEEeCCCccC----cEEEEEEECCcEEEEeCCCCCCCCcc-------cCCCCcCCCCCeEE
Confidence 8777 789999999999999 99999999999999999999987531 01112333689999
Q ss_pred EEcCCCCCCCCCCCCHHHHHHH
Q 040718 150 YLDNTYCNSSYAFPSREVAAQQ 171 (403)
Q Consensus 150 ilD~Ty~~p~~~fp~~~~~~~~ 171 (403)
|+|+||+++. ++++++..+.
T Consensus 202 i~Esty~~~~--~~~~~~~~~~ 221 (459)
T 2i7t_A 202 IIESTYGTHI--HEKREEREAR 221 (459)
T ss_dssp EEECTTTTCC--CCCHHHHHHH
T ss_pred EECCCCCCCC--CCChHHHHHH
Confidence 9999999874 4676655433
No 5
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.92 E-value=1.2e-23 Score=214.17 Aligned_cols=138 Identities=20% Similarity=0.233 Sum_probs=104.7
Q ss_pred ccEEEEcCCchhhhCCccccCCCCcEEeCHhhHhhccccCCC---C---------CccceEeccCCCeEEEEeecCCCCC
Q 040718 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPG---L---------DLSLIRVLDIGSWHSISVVSPSSGE 82 (403)
Q Consensus 15 i~aifLTH~H~DHi~GL~~~~~~~pIy~s~~T~~lL~~~~~~---~---------~~~~i~~l~~~~~~~i~l~~~~~~~ 82 (403)
+++|||||+|.||++|++.+..+.+|||++.|++++...... + ....+.++..++++.+
T Consensus 85 i~~v~lTH~H~DHiggl~~l~~~~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--------- 155 (429)
T 2az4_A 85 HTAVFLSHAHLDHSRMINYLDPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKV--------- 155 (429)
T ss_dssp EEEEECSCSCHHHHTTGGGBCTTSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEE---------
T ss_pred CCEEEECCchHHHhCcHhHhcCCCCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEE---------
Confidence 579999999999999999886688999999999887542210 0 1124567777888776
Q ss_pred cCceEEEEEecCC-CCCCCCceEEEEEEECCeeEEEECCcCcCCCchhhhccchhhhhhccCCCccEEEEcCCCCC-C--
Q 040718 83 KTFVEVIAIDANH-CPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCN-S-- 158 (403)
Q Consensus 83 ~~~v~Vt~~~A~H-~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvLilD~Ty~~-p-- 158 (403)
++++|++++++| +|| |++|+|+.++++++||||+.+.+...+. ...+.+.. .++|+||+||||+. +
T Consensus 156 -g~~~v~~~~~~H~~~g----s~~~~i~~~~~~i~~tGD~~~~~~~~~~---~~~~~~~~--~~~d~Li~Est~~~~~~~ 225 (429)
T 2az4_A 156 -GEISVEIVPVDHDAYG----ASALLIRTPDHFITYTGDLRLHGHNREE---TLAFCEKA--KHTELLMMEGVSISFPER 225 (429)
T ss_dssp -TTEEEEEEECCCSSTT----CEEEEEEETTEEEEECCSCCSSSTTHHH---HHHHHHHH--TTCSEEEEECCGGGSCCC
T ss_pred -CCEEEEEEECCCCChh----hEEEEEEeCCcEEEECCCcccCCCchHH---HHHHHHhc--cCCCEEEECCCCcCcccc
Confidence 789999999999 999 9999999999999999999987653110 01233444 48999999999987 2
Q ss_pred -----CCCCCCHHHHHHH
Q 040718 159 -----SYAFPSREVAAQQ 171 (403)
Q Consensus 159 -----~~~fp~~~~~~~~ 171 (403)
...+++.+++.+.
T Consensus 226 ~~~~~~~~~~s~~~~~~~ 243 (429)
T 2az4_A 226 EPDPAQIAVVSEEDLVQH 243 (429)
T ss_dssp CCCTTBCCCCSHHHHHHH
T ss_pred cccccCCCCCCHHHHHHH
Confidence 1126677776554
No 6
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.91 E-value=3.1e-24 Score=226.73 Aligned_cols=142 Identities=23% Similarity=0.286 Sum_probs=102.2
Q ss_pred ccEEEEcCCchhhhCCccccC--C-----CCcEEeCHhhHhhccccCC--CCC--ccceEeccCCCeEEEEeecCCCCCc
Q 040718 15 SQVYFLTHLHSDHTQGLSSAW--A-----RGPLFCSRLTAKLFPLKFP--GLD--LSLIRVLDIGSWHSISVVSPSSGEK 83 (403)
Q Consensus 15 i~aifLTH~H~DHi~GL~~~~--~-----~~pIy~s~~T~~lL~~~~~--~~~--~~~i~~l~~~~~~~i~l~~~~~~~~ 83 (403)
+++|||||+|.||++||+.+. . ++||||++.|++++...+. +++ ...+.+++.++++++
T Consensus 75 Id~I~iTH~H~DHiggl~~L~~~~~~~~~~~pIy~~~~t~~~l~~~l~~~~~~~~~~~~~~v~~g~~~~l---------- 144 (562)
T 3bk2_A 75 IKAWVLTHGHEDHIGGLPFLLPMIFGKESPVPIYGARLTLGLLRGKLEEFGLRPGAFNLKEISPDDRIQV---------- 144 (562)
T ss_dssp EEEEECCCCCHHHHTTHHHHHHHHHCSCCCSEEEEEHHHHHHHHHHHHHTTCCSTTSEEEEECTTCEEEE----------
T ss_pred CcEEEECCCChHHhCCHHHHHHhhccccCCceEEeCHHHHHHHHHHHHHcCCCcCCceEEEECCCCEEEe----------
Confidence 579999999999999999762 2 7899999999988864331 122 234667888888877
Q ss_pred Cc-eEEEEEecCC-CCCCCCceEEEEEEECCeeEEEECCcCcCCCchhhhccchhhhhhccCCCccEEEEcCCCCCCCCC
Q 040718 84 TF-VEVIAIDANH-CPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNSSYA 161 (403)
Q Consensus 84 ~~-v~Vt~~~A~H-~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvLilD~Ty~~p~~~ 161 (403)
++ ++|++++++| +|| |++|+|+.++++++||||+.+..............+..+...++|+|++|+||+.....
T Consensus 145 g~~~~v~~~~~~H~~~g----s~~~~i~~~~~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~EsT~~~~~g~ 220 (562)
T 3bk2_A 145 GRYFTLDLFRMTHSIPD----NSGVVIRTPIGTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAERPGY 220 (562)
T ss_dssp TTTEEEEEEECCCSSSS----CEEEEEEETTEEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEECTTTTCCSC
T ss_pred CCCEEEEEEECCCCCcc----cEEEEEEECCeEEEEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEecccCCCCCCC
Confidence 67 9999999998 899 99999999999999999999865531100000011111111479999999999964434
Q ss_pred CCCHHHHHH
Q 040718 162 FPSREVAAQ 170 (403)
Q Consensus 162 fp~~~~~~~ 170 (403)
.|+..++.+
T Consensus 221 ~~~e~~v~~ 229 (562)
T 3bk2_A 221 TPSEMEIAK 229 (562)
T ss_dssp CCCHHHHHH
T ss_pred CChHHHHHH
Confidence 466554433
No 7
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.89 E-value=1.7e-22 Score=216.95 Aligned_cols=135 Identities=24% Similarity=0.314 Sum_probs=106.1
Q ss_pred ccEEEEcCCchhhhCCccccC----CCCcEEeCHhhHhhccccCC-------------CCCc-------cceEeccCCCe
Q 040718 15 SQVYFLTHLHSDHTQGLSSAW----ARGPLFCSRLTAKLFPLKFP-------------GLDL-------SLIRVLDIGSW 70 (403)
Q Consensus 15 i~aifLTH~H~DHi~GL~~~~----~~~pIy~s~~T~~lL~~~~~-------------~~~~-------~~i~~l~~~~~ 70 (403)
+++|||||+|.||++||+.+. ++++|||++.|++++...+. .+.. ..+.++.++++
T Consensus 249 Id~VllTH~H~DHiGglp~L~~~~~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 328 (651)
T 3af5_A 249 LDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEV 328 (651)
T ss_dssp CCEEECSCSSHHHHTTHHHHHHTTCCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCC
T ss_pred CCEEEECCCChHhhcCHHHHHhcCCCCceEEEcHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCE
Confidence 689999999999999999762 47899999999987753221 1110 13567788888
Q ss_pred EEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCe--eEEEECCcCcCCCchhhhccchhhhhh--ccCCCc
Q 040718 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG--CLLYTGDFRWEASNERAEIGRNTLVKA--LKDDVV 146 (403)
Q Consensus 71 ~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~--~vlyTGD~r~~~~~~~~~~~~~~ll~~--l~~~~~ 146 (403)
+.+. ++++|+++++||++| |++|+++.+++ +++||||++...+. ++.. +...++
T Consensus 329 ~~l~---------ggi~v~~~~~gH~~G----s~~~~i~~~~~~~~ilftGD~~~~~~~---------ll~~~~~~~~~~ 386 (651)
T 3af5_A 329 RDIS---------PDIRLTLHNAGHILG----SAIVHLHIGNGLHNIAITGDFKFIPTR---------LLEPANAKFPRL 386 (651)
T ss_dssp EEEE---------TTEEEEEEECSSSTT----CEEEEEEETTTTTCEEECCSCCCSCCS---------SCCCCCCBCSSC
T ss_pred EEec---------CCEEEEEecCCCCcC----cEEEEEEECCCceEEEEeCCCCCCccc---------ccccccccCCCC
Confidence 7762 689999999999999 99999999888 99999999997752 2211 123689
Q ss_pred cEEEEcCCCCCCCCCCCCHHHHHHH
Q 040718 147 DILYLDNTYCNSSYAFPSREVAAQQ 171 (403)
Q Consensus 147 DvLilD~Ty~~p~~~fp~~~~~~~~ 171 (403)
|+|++||||+++.+.+|++.+..+.
T Consensus 387 DvLI~EsT~~~~~~~h~s~~~~~~~ 411 (651)
T 3af5_A 387 ETLVMESTYGGANDIQMPREEAEKR 411 (651)
T ss_dssp SEEEEECTTCSTTCCCCCHHHHHHH
T ss_pred CEEEECCCCCCCCCCCCCHHHHHHH
Confidence 9999999999998889998876554
No 8
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.89 E-value=1.6e-22 Score=216.44 Aligned_cols=136 Identities=28% Similarity=0.406 Sum_probs=105.9
Q ss_pred CccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHhhccccCC-------------CCCc-------cceEeccCCCe
Q 040718 14 GSQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAKLFPLKFP-------------GLDL-------SLIRVLDIGSW 70 (403)
Q Consensus 14 ~i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~lL~~~~~-------------~~~~-------~~i~~l~~~~~ 70 (403)
.+++|||||+|.||++||+.+ .++++|||++.|++++...+. .+.. ..+.++.++++
T Consensus 234 ~Id~VlLTH~H~DHiGglp~L~~~~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~ 313 (636)
T 2ycb_A 234 SLDAVIITHAHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEV 313 (636)
T ss_dssp TCCEEECSSSSHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCC
T ss_pred cCcEEEECCCChHHhcCHHHHHhcCCCCeEEEcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCE
Confidence 368999999999999999876 357899999999987753211 1110 13567788888
Q ss_pred EEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCe--eEEEECCcCcCCCchhhhccchhhhhh--ccCCCc
Q 040718 71 HSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG--CLLYTGDFRWEASNERAEIGRNTLVKA--LKDDVV 146 (403)
Q Consensus 71 ~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~--~vlyTGD~r~~~~~~~~~~~~~~ll~~--l~~~~~ 146 (403)
+.+. ++++|+++++||++| |++|+++.+++ +++||||++..... ++.. +...++
T Consensus 314 ~~l~---------ggi~v~~~~~gH~~G----s~~~~i~~~~~~~~ilftGD~~~~~~~---------ll~~~~~~~~~~ 371 (636)
T 2ycb_A 314 TDIA---------PDIRLTLHNAGHILG----SAMAHLHIGDGQHNMVYTGDFKYEQSR---------LLEAAANRFPRI 371 (636)
T ss_dssp EEEE---------TTEEEEEEECCSSTT----CEEEEEEETTTTTCEEECCSCCSSCCS---------SSCCCCCCCSCC
T ss_pred EEec---------CCeEEEEeCCCCCCC----cEEEEEEECCCeEEEEEECCCCCCccc---------ccCCcccCCCCC
Confidence 7762 689999999999999 99999999888 99999999987652 2221 123689
Q ss_pred cEEEEcCCCCCCCCCCCCHHHHHHH
Q 040718 147 DILYLDNTYCNSSYAFPSREVAAQQ 171 (403)
Q Consensus 147 DvLilD~Ty~~p~~~fp~~~~~~~~ 171 (403)
|+|++||||+++.+.+|++.+..++
T Consensus 372 D~LI~EsT~~~~~~~h~s~~~~~~~ 396 (636)
T 2ycb_A 372 ETLVMESTYGGHEDVQPSRNRAEKE 396 (636)
T ss_dssp SEEEEECTTCSGGGCCCCHHHHHHH
T ss_pred eEEEECCCCCCCCCCCCCHHHHHHH
Confidence 9999999999987778988765554
No 9
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.89 E-value=1.3e-22 Score=217.31 Aligned_cols=135 Identities=24% Similarity=0.306 Sum_probs=105.6
Q ss_pred ccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHhhccccCC-------------CCCc-------cceEeccCCCeE
Q 040718 15 SQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAKLFPLKFP-------------GLDL-------SLIRVLDIGSWH 71 (403)
Q Consensus 15 i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~lL~~~~~-------------~~~~-------~~i~~l~~~~~~ 71 (403)
+++|||||+|.||++||+.+ .++++|||++.|++++...+. .+.. ..+..+.+++++
T Consensus 238 Id~VllTH~H~DHiGgl~~L~~~~~~~~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i 317 (640)
T 2xr1_A 238 IDAVIVTHAHLDHQGLVPLLFKYGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVT 317 (640)
T ss_dssp CCEEECCSSCHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCE
T ss_pred CcEEEECCCChhhhccHHHHHhcCCCCeEEECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEE
Confidence 57999999999999999876 357899999999887643211 1110 135667788887
Q ss_pred EEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCe--eEEEECCcCcCCCchhhhccchhhhhh--ccCCCcc
Q 040718 72 SISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFG--CLLYTGDFRWEASNERAEIGRNTLVKA--LKDDVVD 147 (403)
Q Consensus 72 ~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~--~vlyTGD~r~~~~~~~~~~~~~~ll~~--l~~~~~D 147 (403)
.+. ++++|+++++||++| |++|+++.+++ +++||||++...+. ++.. ....++|
T Consensus 318 ~l~---------gg~~v~~~~~GH~~G----s~~~~i~~~~~~~~ilftGD~~~~~~~---------ll~~~~~~~~~~D 375 (640)
T 2xr1_A 318 DIA---------PDIKLTFHNAGHILG----SAISHFHIGDGLHNVVFTGDYKYEKTR---------LFDPAVNKFPRVE 375 (640)
T ss_dssp EEE---------TTEEEEEEECSSSTT----CEEEEEEETTTTEEEEECCSCCSSCCS---------SCCCCCCBCSCCS
T ss_pred Eec---------CCEEEEEEcCCCCcC----cEEEEEEECCceEEEEEECCCCCCCcc---------ccccccccCCCCc
Confidence 762 689999999999999 99999999888 99999999987652 2221 1236899
Q ss_pred EEEEcCCCCCCCCCCCCHHHHHHH
Q 040718 148 ILYLDNTYCNSSYAFPSREVAAQQ 171 (403)
Q Consensus 148 vLilD~Ty~~p~~~fp~~~~~~~~ 171 (403)
+|++||||+++.+.+|++.+..++
T Consensus 376 vLi~EsT~g~~~~~h~s~~~~~~~ 399 (640)
T 2xr1_A 376 TVISEATYGNANAFQPALKDAEKH 399 (640)
T ss_dssp EEEEECTTCSTTCCCCCHHHHHHH
T ss_pred EEEECCCCCCCccCCCCHHHHHHH
Confidence 999999999998889998876555
No 10
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.88 E-value=7.8e-22 Score=201.97 Aligned_cols=144 Identities=22% Similarity=0.380 Sum_probs=112.5
Q ss_pred CCeEEEcCCC-----------------CCccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHhhccccCC------C
Q 040718 3 KGLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAKLFPLKFP------G 56 (403)
Q Consensus 3 ~~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~lL~~~~~------~ 56 (403)
+..|+||+.. ..+++|||||+|.||++||+.+ .++++|||++.|++++...+. .
T Consensus 23 ~~~iLID~G~~~~~~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~~~~~~Iy~t~~t~~l~~~~l~d~~~~~~ 102 (431)
T 3iek_A 23 GRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRATVLLMEIVLEDALKVMD 102 (431)
T ss_dssp TEEEEECCCCCCGGGGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHHHHCS
T ss_pred CeEEEEeCCCCcchhhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHcCCCCeEEEcHHHHHHHHHHHHHHHhhcc
Confidence 4568899742 1368999999999999999976 357899999999988764221 0
Q ss_pred ---CCc-------cceEeccCCCeEEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCeeEEEECCcCcCCC
Q 040718 57 ---LDL-------SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEAS 126 (403)
Q Consensus 57 ---~~~-------~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~~ 126 (403)
+.. ..+.++++++++++ ++++|+++++||++| |++|+++.++++++||||++...+
T Consensus 103 ~~~y~~~~~~~~~~~~~~l~~~~~~~l----------~g~~v~~~~agH~~G----s~~~~i~~~~~~ilfsGD~~~~~~ 168 (431)
T 3iek_A 103 EPFFGPEDVEEALGHLRPLEYGEWLRL----------GALSLAFGQAGHLPG----SAFVVAQGEGRTLVYSGDLGNREK 168 (431)
T ss_dssp SCSSCHHHHHHHHHTEEECCTTCCEEE----------TTEEEEEEECCSSTT----CEEEEEEETTEEEEECCCCCCTTS
T ss_pred cCCCCHHHHHHHHhccEEcCCCCeEEe----------CCEEEEEEeCCCCcC----ceEEEEEECCEEEEEeCCCCCCCC
Confidence 110 24678889998887 899999999999999 999999999999999999998765
Q ss_pred chhhhccchhhh-hhccCCCccEEEEcCCCCCCCCCCCCHHHHHHH
Q 040718 127 NERAEIGRNTLV-KALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ 171 (403)
Q Consensus 127 ~~~~~~~~~~ll-~~l~~~~~DvLilD~Ty~~p~~~fp~~~~~~~~ 171 (403)
. ++ ..-...++|+||+||||+++. +|++++..++
T Consensus 169 ~---------~l~~~~~~~~~D~LI~EsTy~~~~--h~~~~~~~~~ 203 (431)
T 3iek_A 169 D---------VLPDPSLPPLADLVLAEGTYGDRP--HRPYRETVRE 203 (431)
T ss_dssp S---------SSCCCCBCCCCSEEEEECTTTTCC--CCCHHHHHHH
T ss_pred c---------ccCCccccCCccEEEEEcccCCcC--CCChHHHHHH
Confidence 3 12 111226899999999999985 6777665544
No 11
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.69 E-value=1.2e-16 Score=151.65 Aligned_cols=141 Identities=18% Similarity=0.244 Sum_probs=104.9
Q ss_pred CCeEEEcCCC---------CCccEEEEcCCchhhhCCcccc-C---CCCcEEeCHhhH---hhccccCCCCCccceEecc
Q 040718 3 KGLISVDRWT---------EGSQVYFLTHLHSDHTQGLSSA-W---ARGPLFCSRLTA---KLFPLKFPGLDLSLIRVLD 66 (403)
Q Consensus 3 ~~~i~VD~f~---------~~i~aifLTH~H~DHi~GL~~~-~---~~~pIy~s~~T~---~lL~~~~~~~~~~~i~~l~ 66 (403)
+..|+||+.. ..+++|||||.|.||++|+..+ + ...+||+++.+. +++. .+++. ....++.
T Consensus 48 ~~~iLiD~G~~~~~~~~~~~~id~IliTH~H~DHi~gl~~l~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~-~~~~~~~ 124 (258)
T 3g1p_A 48 DAITLIDAGLHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGCDDLFK--HPGLL-DFSHTVE 124 (258)
T ss_dssp TEEEEECCCCTTHHHHCCTTSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSCSTTTTT--SCTTE-EEEEECC
T ss_pred CcEEEEECCchHHHhhcCcccCCEEEEccCchhHhCCHHHHhccCCCCeEEEeChhhhhHHHHhc--CCCcc-ccccccC
Confidence 4579999973 3589999999999999999876 2 237899999887 3332 11211 1124677
Q ss_pred CCCeEEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCeeEEEECCcCcCCCchhhhccchhhhhhccCCCc
Q 040718 67 IGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVV 146 (403)
Q Consensus 67 ~~~~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~ 146 (403)
.++.+++ ++++|+++++.|.++ +++|+|+.++.+++|+||+...++. +.+.+...++
T Consensus 125 ~g~~~~~----------g~~~v~~~~~~H~~~----~~g~~i~~~~~~i~~~GDt~~~~~~---------~~~~l~~~~~ 181 (258)
T 3g1p_A 125 PFVVFDL----------QGLQVTPLPLNHSKL----TFGYLLETAHSRVAWLSDTAGLPEK---------TLKFLRNNQP 181 (258)
T ss_dssp TTCCEEE----------TTEEEEEEECCSSSC----CEEEEEECSSCEEEEECSCSSCCHH---------HHHHHHHTCC
T ss_pred CCCeEEE----------CCEEEEEEECCCCCC----ceEEEEEeCCcEEEEECCCCCCCHH---------HHHHHHhCCC
Confidence 7888777 899999999999999 9999999988899999999987642 3344433589
Q ss_pred cEEEEcCCCCCCC---CCCCCHHHHH
Q 040718 147 DILYLDNTYCNSS---YAFPSREVAA 169 (403)
Q Consensus 147 DvLilD~Ty~~p~---~~fp~~~~~~ 169 (403)
|+||+|+||.... ..+-+.++++
T Consensus 182 Dlli~e~t~~~~~~~~~~H~~~~~a~ 207 (258)
T 3g1p_A 182 QVMVMDCSHPPRADAPRNHCDLNTVL 207 (258)
T ss_dssp SEEEEECCBSSCSSCCSSSCBHHHHH
T ss_pred CEEEEeCCCCCccccCCCCCCHHHHH
Confidence 9999999998653 2234444444
No 12
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.64 E-value=8.7e-16 Score=145.86 Aligned_cols=129 Identities=11% Similarity=0.085 Sum_probs=100.7
Q ss_pred CCeEEEcCCC------------CCccEEEEcCCchhhhCCcccc-----C--------CCCcEEeCHhhHhhcccc-CCC
Q 040718 3 KGLISVDRWT------------EGSQVYFLTHLHSDHTQGLSSA-----W--------ARGPLFCSRLTAKLFPLK-FPG 56 (403)
Q Consensus 3 ~~~i~VD~f~------------~~i~aifLTH~H~DHi~GL~~~-----~--------~~~pIy~s~~T~~lL~~~-~~~ 56 (403)
+..|+||+.. ..+++|||||.|.||++|++.+ + ...+||+++.+.+.+... ++.
T Consensus 52 ~~~iLiD~G~~~~~~l~~~~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~ 131 (268)
T 1zkp_A 52 GFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLTHEP 131 (268)
T ss_dssp TEEEEECCCTTHHHHHTTTCCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHHHHHTTCBTT
T ss_pred CcEEEEECCHHHHHHHHHhCCcccCCEEEEecCCchhhCCHHHHHHHHHhcccccCCCCceEEEeCccHHHHHHhcccCC
Confidence 4568999863 2478999999999999999753 1 257999999998877542 111
Q ss_pred CCccceEeccCCCeEEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCeeEEEECCcCcCCCchhhhccchh
Q 040718 57 LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNT 136 (403)
Q Consensus 57 ~~~~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~~~~~~ 136 (403)
...+..+..++.+.+ ++++|+++++.|++| +++|+++.++.+++|+||+.+.+.
T Consensus 132 --~~~~~~~~~g~~~~~----------g~~~v~~~~~~H~~~----~~~~~i~~~~~~i~~~GD~~~~~~---------- 185 (268)
T 1zkp_A 132 --HTKGIPYNPEETLQI----------GPFSISFLKTVHPVT----CFAMRITAGNDIVVYSADSSYIPE---------- 185 (268)
T ss_dssp --TEEEEECCTTSCEEE----------TTEEEEEEECCSSSC----CEEEEEEETTEEEEECCSCCCCTT----------
T ss_pred --ccceEEecCCCeEEE----------CCEEEEEEECCCCCC----ceEEEEEECCeEEEEeCCCCCCHH----------
Confidence 123455666777766 889999999999999 999999998899999999998664
Q ss_pred hhhhccCCCccEEEEcCCCCCCC
Q 040718 137 LVKALKDDVVDILYLDNTYCNSS 159 (403)
Q Consensus 137 ll~~l~~~~~DvLilD~Ty~~p~ 159 (403)
+.+.+ .++|+|++|+||..+.
T Consensus 186 ~~~~~--~~~d~li~e~~~~~~~ 206 (268)
T 1zkp_A 186 FIPFT--KDADLFICECNMYAHQ 206 (268)
T ss_dssp HHHHH--TTCSEEEEECCBCTTS
T ss_pred HHHHH--cCCCEEEEECCCCccc
Confidence 23344 5799999999998653
No 13
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.63 E-value=1.6e-15 Score=146.83 Aligned_cols=138 Identities=15% Similarity=0.094 Sum_probs=105.7
Q ss_pred eEEEcCCC-----------CCccEEEEcCCchhhhCCcccc-------CCCCcEEeCHhhHhhccccCCC---------C
Q 040718 5 LISVDRWT-----------EGSQVYFLTHLHSDHTQGLSSA-------WARGPLFCSRLTAKLFPLKFPG---------L 57 (403)
Q Consensus 5 ~i~VD~f~-----------~~i~aifLTH~H~DHi~GL~~~-------~~~~pIy~s~~T~~lL~~~~~~---------~ 57 (403)
.|+||+.. ..+++|||||.|.||++||+.+ ....+||+++.+.+.+...+.. +
T Consensus 79 ~iLID~G~~~~~~l~~~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (293)
T 3md7_A 79 VVVIDTGPDFRMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPVGSSY 158 (293)
T ss_dssp EEEECCCTTHHHHHHHHTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGGTSCCTTCCC
T ss_pred EEEEECCccHHHHHHhcCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhhhccccccCC
Confidence 79999964 3689999999999999999864 2478999999999888654321 1
Q ss_pred Cc-cceEeccCCCeEEEEeecCCCCCcCc----eEEEEEecCCC-CCCCCceEEEEEEECCeeEEEECCcCcCCCchhhh
Q 040718 58 DL-SLIRVLDIGSWHSISVVSPSSGEKTF----VEVIAIDANHC-PGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAE 131 (403)
Q Consensus 58 ~~-~~i~~l~~~~~~~i~l~~~~~~~~~~----v~Vt~~~A~H~-pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~ 131 (403)
+. ..+..+..++++.+ ++ ++|+++++.|. .+ +++|+|+ +++|+||+...++
T Consensus 159 ~~~~~~~~l~~g~~~~~----------g~~~~~~~v~~~~~~H~~~~----~~g~~i~----~~~y~gDt~~~~~----- 215 (293)
T 3md7_A 159 PPILSMHDIAPETPFSI----------EGAGGAIRFEPFSQVHGDIE----SLGFRIG----SVVYCTDVSAFPE----- 215 (293)
T ss_dssp CCCEEEEECCTTCCEEE----------CCTTCCEEEEEEEEEETTEE----EEEEEET----TEEEECSCSBCCG-----
T ss_pred CCceEEEEcCCCCcEEE----------CCCCCcEEEEEEEecCCCCC----EEEEEEe----EEEEECCCCCCCH-----
Confidence 11 13455666777766 66 99999999997 57 9999997 7999999986543
Q ss_pred ccchhhhhhccCCCccEEEEcCCCCCCCCCCCCHHHHHHH
Q 040718 132 IGRNTLVKALKDDVVDILYLDNTYCNSSYAFPSREVAAQQ 171 (403)
Q Consensus 132 ~~~~~ll~~l~~~~~DvLilD~Ty~~p~~~fp~~~~~~~~ 171 (403)
.+.+.+ .++|+||+|+|+..+...+.+-+++++.
T Consensus 216 ----~~~~~~--~~~Dlli~e~~~~~~~~~H~~~~~a~~~ 249 (293)
T 3md7_A 216 ----QSLQYI--KDADVLIIGALQYRPHPSHFSLGEALEW 249 (293)
T ss_dssp ----GGHHHH--TTCSEEEEECCCSSCBTTBCCHHHHHHH
T ss_pred ----HHHHHh--cCCCEEEEeCccCCCCCCCCCHHHHHHH
Confidence 245556 5899999999988876667776666543
No 14
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.62 E-value=1.4e-15 Score=164.81 Aligned_cols=139 Identities=15% Similarity=0.150 Sum_probs=97.9
Q ss_pred CccEEEEcCCchhhhCCccccC--------CCCcEEeCHhhHhhccccC------CC----C-----Cc-------cceE
Q 040718 14 GSQVYFLTHLHSDHTQGLSSAW--------ARGPLFCSRLTAKLFPLKF------PG----L-----DL-------SLIR 63 (403)
Q Consensus 14 ~i~aifLTH~H~DHi~GL~~~~--------~~~pIy~s~~T~~lL~~~~------~~----~-----~~-------~~i~ 63 (403)
.+++|||||+|.||++||+.+. .++||||++.|++++...+ .+ + .. ..+.
T Consensus 53 ~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~pIY~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~ 132 (717)
T 2i7x_A 53 EIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIV 132 (717)
T ss_dssp GCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSE
T ss_pred CCCEEEECCCChHHHCCHHHHHHhhhhcccCCceEEecchhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceE
Confidence 3589999999999999999762 2689999999987654211 00 0 00 1356
Q ss_pred eccCCCeEEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCeeEEEECCcCcCCCchhhhccc----hhhhh
Q 040718 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGR----NTLVK 139 (403)
Q Consensus 64 ~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~~~~----~~ll~ 139 (403)
++.+++++.+. +..++++|+++++||+|| |++|+|+.++++|+||||++......-..... ...+.
T Consensus 133 ~l~~ge~i~l~------~~~ggi~V~~~~aGHs~G----s~~~~I~~~~~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~ 202 (717)
T 2i7x_A 133 PLKYSQLVDLR------SRYDGLTLLAYNAGVCPG----GSIWCISTYSEKLVYAKRWNHTRDNILNAASILDATGKPLS 202 (717)
T ss_dssp EECTTCCEEET------TTTTTEEEEEEECSSSTT----CEEEEEECSSCEEEECSSCCSSCCSSCCCCTTBCTTSCBCS
T ss_pred EecCCCEEEEe------ecCCCEEEEEECCCCCCC----cEEEEEEeCCCEEEEECCCCCCcccccCccccccccchhHH
Confidence 77888877661 012689999999999999 99999999889999999999876531000000 00112
Q ss_pred hccCCCccEEEEcCCCCCCCCCCCCHH
Q 040718 140 ALKDDVVDILYLDNTYCNSSYAFPSRE 166 (403)
Q Consensus 140 ~l~~~~~DvLilD~Ty~~p~~~fp~~~ 166 (403)
.+ .++|+||+|+||+.+ .+|+++
T Consensus 203 ~l--~~~D~LI~EsTy~~~--~h~~~~ 225 (717)
T 2i7x_A 203 TL--MRPSAIITTLDRFGS--SQPFKK 225 (717)
T ss_dssp TT--SSCSEEEECCSCCCC--SSCHHH
T ss_pred hc--cCCcEEEEcCCCCCC--CCCCHH
Confidence 23 589999999999986 356554
No 15
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.62 E-value=9.5e-16 Score=147.99 Aligned_cols=130 Identities=18% Similarity=0.119 Sum_probs=96.2
Q ss_pred CCeEEEcCCC-------------CCccEEEEcCCchhhhCCccccC---------CCCcEEeCHhhHhhccccCC--CC-
Q 040718 3 KGLISVDRWT-------------EGSQVYFLTHLHSDHTQGLSSAW---------ARGPLFCSRLTAKLFPLKFP--GL- 57 (403)
Q Consensus 3 ~~~i~VD~f~-------------~~i~aifLTH~H~DHi~GL~~~~---------~~~pIy~s~~T~~lL~~~~~--~~- 57 (403)
+..|+||+.. ..+++|||||.|.||++||+.+. ...+||+++.+.+++...+. ..
T Consensus 33 ~~~iliD~G~~~~~~l~~~~~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~ 112 (306)
T 2cbn_A 33 SGLWLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSW 112 (306)
T ss_dssp CCEEEECCCTTHHHHHHTSCCCTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCC
T ss_pred CcEEEEECCHHHHHHHHHhCCCHHHcCEEEEecCCchhhCChHHHHHHHHhcCCCCCeEEEcCccHHHHHHHHHHhhccC
Confidence 4579999853 24689999999999999997541 35689999999888764321 10
Q ss_pred -C-ccceEeccCCCeEEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEE-------------------------
Q 040718 58 -D-LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG------------------------- 110 (403)
Q Consensus 58 -~-~~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~------------------------- 110 (403)
. ...+..+..++.+.+ ++++|+++++.|..+ +++|+|+.
T Consensus 113 ~~~~~~~~~~~~g~~~~~----------~~~~v~~~~~~H~~~----~~gy~i~~~~~~~~~~~~~~~~~gv~~~~~~~~ 178 (306)
T 2cbn_A 113 TDYPLEIVEIGAGEILDD----------GLRKVTAYPLEHPLE----CYGYRIEEHDAPGALNAQALKAAGVPPGPLFQE 178 (306)
T ss_dssp CSSCEEEEECCSEEEEEC----------SSEEEEEEECBSSSC----CEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHH
T ss_pred CCceEEEEEcCCCcEeec----------CCEEEEEEEccCCCC----ccEEEEEecCccCccCHHHHHHcCCCCchHHHH
Confidence 0 012344555554443 789999999999988 99999984
Q ss_pred -------------------------CCeeEEEECCcCcCCCchhhhccchhhhhhccCCCccEEEEcCCCCCC
Q 040718 111 -------------------------DFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNS 158 (403)
Q Consensus 111 -------------------------~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvLilD~Ty~~p 158 (403)
++.+|+|+||++..+. +.+.+ .++|+||+||||.+.
T Consensus 179 l~~g~~v~~~~G~~~~~~~~~~~~~~g~~i~~sgDt~~~~~----------~~~~~--~~~D~li~E~t~~~~ 239 (306)
T 2cbn_A 179 LKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDA----------ALDLA--KGVDVMVHEATLDIT 239 (306)
T ss_dssp HHHTCCCEETTTEECCGGGTBCCCCCCCEEEECCSCBSCST----------HHHHH--TTCSEEEEECCBCGG
T ss_pred hcCCCeEEcCCCcEEcHHHhcCCCCCCCEEEEeCCCCCHHH----------HHHHh--cCCCEEEEECcCChh
Confidence 3568999999998764 33444 579999999999864
No 16
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.61 E-value=6.1e-16 Score=150.62 Aligned_cols=130 Identities=16% Similarity=0.200 Sum_probs=95.8
Q ss_pred CCeEEEcCCCC-------------CccEEEEcCCchhhhCCccccC---------CCCcEEeCHhhHhhccccCC--C--
Q 040718 3 KGLISVDRWTE-------------GSQVYFLTHLHSDHTQGLSSAW---------ARGPLFCSRLTAKLFPLKFP--G-- 56 (403)
Q Consensus 3 ~~~i~VD~f~~-------------~i~aifLTH~H~DHi~GL~~~~---------~~~pIy~s~~T~~lL~~~~~--~-- 56 (403)
+..|+||+... .+++|||||.|.||++|++.+. ...+||+++.+.+++...+. .
T Consensus 31 ~~~iLiD~G~~~~~~l~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~ 110 (320)
T 1y44_A 31 RSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTKTH 110 (320)
T ss_dssp SEEEEECCCTTHHHHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCC
T ss_pred CcEEEEECCHHHHHHHHHcCCCHHHcCEEEEeCCChhhhCCHHHHHHHHHhcCCCCCEEEEeCHHHHHHHHHHHHhhccC
Confidence 34699998641 3689999999999999998541 25689999999888754221 0
Q ss_pred CC-ccceEeccCCCeEEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEE-------------------------
Q 040718 57 LD-LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRG------------------------- 110 (403)
Q Consensus 57 ~~-~~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~------------------------- 110 (403)
.. ...+..+..++.+++ ++++|++++++|.++ +++|+++.
T Consensus 111 ~~~~~~~~~~~~g~~~~~----------~~~~v~~~p~~H~~~----~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~~~ 176 (320)
T 1y44_A 111 LTYPLAIQEIEEGIVFED----------DQFIVTAVSVIHGVE----AFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQK 176 (320)
T ss_dssp CSSCEEEEECCSEEEEEC----------SSEEEEEEECBSSSS----BEEEEEEECCBCCCC------------------
T ss_pred CCCceEEEEcCCCceEec----------CCEEEEEEEccCCCC----cceEEEecCCCcCccCHHHHHHcCCCCchhHHH
Confidence 00 012344554444443 789999999999999 99999984
Q ss_pred -------------------------CCeeEEEECCcCcCCCchhhhccchhhhhhccCCCccEEEEcCCCCCC
Q 040718 111 -------------------------DFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNS 158 (403)
Q Consensus 111 -------------------------~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvLilD~Ty~~p 158 (403)
++.+++|+||++..+. +.+.+ .++|+||+||||.+.
T Consensus 177 l~~g~~v~~~~G~i~~~~~~~~~~~~g~~i~~sgDt~~~~~----------~~~~~--~~~D~li~E~t~~~~ 237 (320)
T 1y44_A 177 IKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSDK----------LKELA--RDCDVMVHEATFAKE 237 (320)
T ss_dssp --------------------CCCCBCCCEEEECCSCBCCHH----------HHHHT--TTCSEEEEECCBCTT
T ss_pred hhCCCeEEcCCCeEEcHHHhcccCCCCCEEEEeCCCCCHHH----------HHHHh--CCCCEEEEeccCCcc
Confidence 4568999999998653 34445 589999999999865
No 17
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.58 E-value=2.1e-15 Score=143.15 Aligned_cols=128 Identities=18% Similarity=0.085 Sum_probs=91.8
Q ss_pred CeEEEcCCC----------CCccEEEEcCCchhhhCCcccc------CC-----CCcEEeCHhhHhhccccCC-------
Q 040718 4 GLISVDRWT----------EGSQVYFLTHLHSDHTQGLSSA------WA-----RGPLFCSRLTAKLFPLKFP------- 55 (403)
Q Consensus 4 ~~i~VD~f~----------~~i~aifLTH~H~DHi~GL~~~------~~-----~~pIy~s~~T~~lL~~~~~------- 55 (403)
..|+||+.. ..+++|||||+|.||++|++.+ .. ..+||+++.+. .+...+.
T Consensus 20 ~~iLiD~G~~~~~~l~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~~~~-~l~~~~~~~~~~~~ 98 (280)
T 2e7y_A 20 ERILFDAGEGVSTTLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEGNR-AVEEYTEFIKRANP 98 (280)
T ss_dssp GTEEEEECTTHHHHHGGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETTCH-HHHHHHHHHHHHCG
T ss_pred cEEEEECCcchHHHhccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECccHH-HHHHHHHHHhhccc
Confidence 468999864 2478999999999999998865 11 37899999887 6643210
Q ss_pred CCC-ccceEeccCCCeEEEEeecCCCCCcC-----ceEEEEEecCCCCCCCCceEEEEEEE-------------------
Q 040718 56 GLD-LSLIRVLDIGSWHSISVVSPSSGEKT-----FVEVIAIDANHCPGILGCSVMLLFRG------------------- 110 (403)
Q Consensus 56 ~~~-~~~i~~l~~~~~~~i~l~~~~~~~~~-----~v~Vt~~~A~H~pG~~~~Sv~fl~e~------------------- 110 (403)
... ...+..+..++.+.+ + +++|++++++|++| ..+++|+|+.
T Consensus 99 ~~~~~~~~~~~~~g~~~~~----------g~~~~~~~~v~~~~~~H~~~--~~~~g~~i~~~~~~l~~~~~g~~~~~~~~ 166 (280)
T 2e7y_A 99 DLRFSFNVHPLKEGERVFL----------RNAGGFKRYVQPFRTKHVSS--EVSFGYHIFEVRRKLKKEFQGLDSKEISR 166 (280)
T ss_dssp GGTTTEEEEEECTTCCEEC----------CCSSCSCEEEEEEECCSCSS--SCCEEEEEEEEEEEECGGGTTCCHHHHHH
T ss_pred CCCCceEEEEcCCCCEEEe----------CCcccCCEEEEEEEccCCCC--CceEEEEEEEcccccCHhhcCCCHHHHHH
Confidence 000 013455666776665 5 89999999999875 3478999974
Q ss_pred --------------CCeeEEEECCcCcCCCchhhhccchhhhhhccCCCccEEEEcCCCCCC
Q 040718 111 --------------DFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNS 158 (403)
Q Consensus 111 --------------~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvLilD~Ty~~p 158 (403)
++.+++|+||++.. . .+.+ .++|+||+|+||.++
T Consensus 167 l~~~~g~~~~~~~~~g~~i~ysgDt~~~--~----------~~~~--~~~d~li~e~t~~~~ 214 (280)
T 2e7y_A 167 LVKEKGRDFVTEEYHKKVLTISGDSLAL--D----------PEEI--RGTELLIHECTFLDA 214 (280)
T ss_dssp HHHHHCTGGGEEEEEEEEEEECCSCSSC--C----------HHHH--TTCSCEEEECCBC--
T ss_pred HHhhcCCceecCCccCCEEEEECCCChH--H----------HHhh--cCCCEEEEeCCcCCh
Confidence 34589999999986 2 1223 579999999999876
No 18
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.52 E-value=2.9e-14 Score=140.63 Aligned_cols=126 Identities=18% Similarity=0.195 Sum_probs=91.9
Q ss_pred CccEEEEcCCchhhhCCcccc--CCCCcEEeCHhhHhhccccCCC-------CCccceEeccCCCeEEEEeecCCCCCcC
Q 040718 14 GSQVYFLTHLHSDHTQGLSSA--WARGPLFCSRLTAKLFPLKFPG-------LDLSLIRVLDIGSWHSISVVSPSSGEKT 84 (403)
Q Consensus 14 ~i~aifLTH~H~DHi~GL~~~--~~~~pIy~s~~T~~lL~~~~~~-------~~~~~i~~l~~~~~~~i~l~~~~~~~~~ 84 (403)
.+++|||||.|.||++||+.+ ....+||+++.+.+.|...++. ++...+.++..++++.+. ..+
T Consensus 82 ~i~~i~lTH~H~DH~~gl~~l~~~~~~~vy~~~~~~~~l~~~~~~f~~~~~~~~~i~~~~i~~g~~~~i~-------~~~ 154 (321)
T 3jxp_A 82 GINAIVLLDSQIDHTTGLLSLREGCPHQVWCTDMVHQDLTTGFPLFNMLSHWNGGLQWNRIELEGSFVID-------ACP 154 (321)
T ss_dssp SEEEEECSCCCHHHHGGGGGGGGGCCEEEEECHHHHHHTTTTSCHHHHHTTTTTCEEEEECCSSSCEECT-------TST
T ss_pred cCCEEEECCCChhhhhhHHHHHhcCCCeEEECHHHHHHHHhhCccccccccccCceeEEEcCCCCeEEec-------cCC
Confidence 468999999999999999986 2578999999999998754420 000123455566666540 126
Q ss_pred ceEEEEEecC--------CCCCC-CCceEEEEEE--ECCeeEEEECCcCcCCCchhhhccchhhhhhccCCCccEEEEcC
Q 040718 85 FVEVIAIDAN--------HCPGI-LGCSVMLLFR--GDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDN 153 (403)
Q Consensus 85 ~v~Vt~~~A~--------H~pG~-~~~Sv~fl~e--~~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvLilD~ 153 (403)
+++|+++++. |.++. ...+++|+|+ .++.+++|+||+...++ .+.+.+ .++|+||+|+
T Consensus 155 ~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~g~~i~y~~Dt~~~~~---------~~~~~~--~~~D~li~ea 223 (321)
T 3jxp_A 155 NLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDE---------KLLAMM--HGADCLLVDG 223 (321)
T ss_dssp TEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEEEEESSCCCCCH---------HHHHHH--HHCSEEEEEC
T ss_pred CeEEEEEEecCCccccccccccccCCCcEEEEEEecCCCcEEEEECCCCCCCH---------HHHHHh--cCCCEEEEeC
Confidence 8999999998 64300 0239999999 77889999999987543 255666 5699999999
Q ss_pred CCCC
Q 040718 154 TYCN 157 (403)
Q Consensus 154 Ty~~ 157 (403)
||..
T Consensus 224 t~~~ 227 (321)
T 3jxp_A 224 TLWE 227 (321)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9875
No 19
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.47 E-value=1.6e-13 Score=130.68 Aligned_cols=119 Identities=17% Similarity=0.225 Sum_probs=88.6
Q ss_pred CccEEEEcCCchhhhCCcccc--CCCCcEEeC-HhhHhhccccCCCCCccceEeccCCCeEEEEeecCCCCCcCceEEEE
Q 040718 14 GSQVYFLTHLHSDHTQGLSSA--WARGPLFCS-RLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIA 90 (403)
Q Consensus 14 ~i~aifLTH~H~DHi~GL~~~--~~~~pIy~s-~~T~~lL~~~~~~~~~~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~ 90 (403)
.+++|||||.|.||++++... ..+.+||++ ..+++.+... ++. ....+ ++++++ ++++|++
T Consensus 64 ~id~iliTH~H~DH~~~~~~~~~~~~~~v~~~~~~~~~~l~~~--g~~--~~~~~--~~~~~~----------~~~~i~~ 127 (264)
T 3rpc_A 64 NVTAVVVTHTHLDHWDDTAINSIPKSLPIFVQNTADKELITSQ--GFI--DVRII--FESLEF----------NGITLRK 127 (264)
T ss_dssp TCCEEECSCCCGGGSCHHHHHHSCTTSCEEESSHHHHHHHHHT--TCS--CEEEC--SSEEEE----------TTEEEEE
T ss_pred cCCEEEECCCchhhCCCHHHHhhccCCeEEEeCHHHHHHHHhc--CCC--eeEEe--cccEEE----------CCEEEEE
Confidence 468999999999999998754 357899999 8888888532 342 23333 677776 8999999
Q ss_pred EecCCCCCCC----------CceEEEEEEEC-CeeEEEECCcCcCCCchhhhccchhhhhhccCCCccEEEEcCCCCCC
Q 040718 91 IDANHCPGIL----------GCSVMLLFRGD-FGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILYLDNTYCNS 158 (403)
Q Consensus 91 ~~A~H~pG~~----------~~Sv~fl~e~~-~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvLilD~Ty~~p 158 (403)
+++.|.++.. +.+++|+|+.+ +.+++|+||+.+.+++ .+..+..++|++++++++..+
T Consensus 128 ~pa~H~~~~~~~~p~~~~~~~~~~g~~i~~~~~~~i~~~GDt~~~~~~----------~~~~~~~~~Dv~il~~g~~~~ 196 (264)
T 3rpc_A 128 TGGSHGTVEMYANPVLAPLAGDAMGVIFEAADEPTVYLVGDTVWTSDV----------EKALLRFDPNVIIMNTGYAQI 196 (264)
T ss_dssp ECCCSSCHHHHTSTTHHHHHCCCCEEEEECTTSCCEEECCSCCSCHHH----------HHHHHHHCCSEEEEECSCBCB
T ss_pred eccccCCccccccccccccccccEEEEEEeCCccEEEEECCcCchHHH----------HHHHHHhCCCEEEEecCcccc
Confidence 9999976410 23589999987 6899999999998753 111222368999999996543
No 20
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.41 E-value=1e-12 Score=123.50 Aligned_cols=119 Identities=21% Similarity=0.181 Sum_probs=91.3
Q ss_pred CCeEEEcCCCC--------CccEEEEcCCchhhhCCcccc----CCCCcEEeCHhhHhhccccCCCCCccceEeccCCC-
Q 040718 3 KGLISVDRWTE--------GSQVYFLTHLHSDHTQGLSSA----WARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS- 69 (403)
Q Consensus 3 ~~~i~VD~f~~--------~i~aifLTH~H~DHi~GL~~~----~~~~pIy~s~~T~~lL~~~~~~~~~~~i~~l~~~~- 69 (403)
+..|+||++.. .+++|||||.|.||+ |+..+ ..+.+||+++.+++.+.. ...+..++
T Consensus 46 ~~~iliDpg~~~~~~~~~~~id~VliTH~H~DH~-~~~~l~~~~~~~~~v~~~~~~~~~l~~---------~~~l~~g~~ 115 (235)
T 3kl7_A 46 NHSIQVDPVSEYADYTTFPKADIILITHEHGDHL-DPKAIQAVEKSDTEIIANENSQKKLGK---------GKVLKNGDT 115 (235)
T ss_dssp TEEEEESCCTTTCCTTSSCCCSEEEECCSSTTTC-CHHHHHHHCCTTCEEEECHHHHHHHTC---------SEECCTTCE
T ss_pred CEEEEECCCCCccchhhCCCCCEEEECCCccccC-CHHHHHHhhcCCCEEEEcHHHHHHhcC---------cEEecCCCE
Confidence 45799999752 579999999999999 55432 357899999999887741 24566676
Q ss_pred eEEEEeecCCCCCcCceEEEEEecCCCCCC------CCceEEEEEEECCeeEEEECCcCcCCCchhhhccchhhhhhccC
Q 040718 70 WHSISVVSPSSGEKTFVEVIAIDANHCPGI------LGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKD 143 (403)
Q Consensus 70 ~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~------~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~ 143 (403)
.+++ ++++|+++++.|.++. .+.+++|+|+.++.+++|+||+.+.+++ ..+
T Consensus 116 ~~~~----------g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~g~~i~~~GDt~~~~~~-----------~~l-- 172 (235)
T 3kl7_A 116 DTSI----------SYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVYIAGDTEDIPEM-----------KDL-- 172 (235)
T ss_dssp ECCS----------TTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTEEEEECCSCCSCGGG-----------GGC--
T ss_pred EEEE----------CCEEEEEEEeecCCCccccccCCCCceEEEEEeCCeEEEEECCCCchhhH-----------Hhh--
Confidence 6555 8899999999986520 1235899999999999999999987642 234
Q ss_pred CCccEEEEcCC
Q 040718 144 DVVDILYLDNT 154 (403)
Q Consensus 144 ~~~DvLilD~T 154 (403)
.++|++++++.
T Consensus 173 ~~~Dv~il~~~ 183 (235)
T 3kl7_A 173 KDIDIAFLPVN 183 (235)
T ss_dssp CSCSEEEEECC
T ss_pred cCCCEEEECCC
Confidence 57999999986
No 21
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.41 E-value=1.3e-12 Score=130.89 Aligned_cols=140 Identities=18% Similarity=0.023 Sum_probs=92.6
Q ss_pred CCeEEEcCCCC-------------CccEEEEcCCchhhhCCccccC-------------CCCcEEeCHhhHhhccccCC-
Q 040718 3 KGLISVDRWTE-------------GSQVYFLTHLHSDHTQGLSSAW-------------ARGPLFCSRLTAKLFPLKFP- 55 (403)
Q Consensus 3 ~~~i~VD~f~~-------------~i~aifLTH~H~DHi~GL~~~~-------------~~~pIy~s~~T~~lL~~~~~- 55 (403)
+..++||+... .+++|||||.|.||++||+.+. ...+||+++.+.+.+...+.
T Consensus 28 ~~~iLiD~G~g~~~~l~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~~~~~~~l~iygp~~~~~~l~~~l~~ 107 (368)
T 3zwf_A 28 GECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTMEL 107 (368)
T ss_dssp TEEEEECCCTTHHHHHHHSSSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC------CCEEEEEETTHHHHHHHHHHH
T ss_pred CeEEEEeCChhHHHHHHHcCCChHHCCEEEECCCChHHhCcHHHHHHHhhhccccccCCCCeEEEEcHHHHHHHHHHHHh
Confidence 44689999751 4789999999999999998641 25789999999888764210
Q ss_pred ---CCC-ccceEeccC---------------------------CCeEEEEeecCC----CCCcCceEEEEEecCCCCCCC
Q 040718 56 ---GLD-LSLIRVLDI---------------------------GSWHSISVVSPS----SGEKTFVEVIAIDANHCPGIL 100 (403)
Q Consensus 56 ---~~~-~~~i~~l~~---------------------------~~~~~i~l~~~~----~~~~~~v~Vt~~~A~H~pG~~ 100 (403)
.+. ...++.+.. ++.+.+ ...+ .-..++++|+++++.|...
T Consensus 108 ~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~--~~~~~~~~~~~~~~~~V~a~~~~H~vp-- 183 (368)
T 3zwf_A 108 SHTELVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILL--DSEENSYLLFDDEQFVVKAFRLFHRIP-- 183 (368)
T ss_dssp TTCCCSSCEEEEEECCCGGGSCC-------------------CCCEECC--BTTTTBEEEEECSSEEEEEEEEESSSC--
T ss_pred hCcCCCceEEEEEeecCccccccccccccccccccccCccccccccccc--ccccCceeEEeCCCEEEEEEeccCCCc--
Confidence 010 011222221 111100 0000 0012689999999999777
Q ss_pred CceEEEEEEEC--------------------------------------------------CeeEEEECCcCcCCCchhh
Q 040718 101 GCSVMLLFRGD--------------------------------------------------FGCLLYTGDFRWEASNERA 130 (403)
Q Consensus 101 ~~Sv~fl~e~~--------------------------------------------------~~~vlyTGD~r~~~~~~~~ 130 (403)
+++|+|+.. +.+|+|+||+......
T Consensus 184 --~~gy~i~e~~~~g~~~~ek~~~~gip~G~~~~~Lk~G~~v~~~dG~~i~~~~v~~~~~~g~~v~~~GDT~~~~~~--- 258 (368)
T 3zwf_A 184 --SFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGD--- 258 (368)
T ss_dssp --EEEEEEEECC------------------------------------------------CCCEEEEECSCSEECSS---
T ss_pred --eEEEEEEecCCcCccCHHHHHHcCCCchHHHHhcCCCCeEEecCCEEEEhHHhccccccceEEEEEecCCcccch---
Confidence 999999864 5689999999872111
Q ss_pred hccchhhhhhccCCCccEEEEcCCCCCC
Q 040718 131 EIGRNTLVKALKDDVVDILYLDNTYCNS 158 (403)
Q Consensus 131 ~~~~~~ll~~l~~~~~DvLilD~Ty~~p 158 (403)
.+.+.+ .++|+||+|+||.+.
T Consensus 259 -----~~~~~~--~~~Dlli~Eat~~~~ 279 (368)
T 3zwf_A 259 -----GGVKLC--FEADLLIHEATLDDA 279 (368)
T ss_dssp -----HHHHHT--TTCSEEEEECCSCGG
T ss_pred -----hHHHHh--cCCCEEEEecCCChH
Confidence 244555 679999999999864
No 22
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.36 E-value=7.8e-12 Score=124.49 Aligned_cols=119 Identities=20% Similarity=0.235 Sum_probs=86.9
Q ss_pred CccEEEEcCCchhhhC--Ccccc---CC-CCcEEeCHhhHhhccccCCCCCccceEeccCCCeEEEEeecCCCCCcCceE
Q 040718 14 GSQVYFLTHLHSDHTQ--GLSSA---WA-RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVE 87 (403)
Q Consensus 14 ~i~aifLTH~H~DHi~--GL~~~---~~-~~pIy~s~~T~~lL~~~~~~~~~~~i~~l~~~~~~~i~l~~~~~~~~~~v~ 87 (403)
.+++|||||.|.||++ ++..+ +. ..+||+++.+++.+.. + +++...+..+..++.+.+ ++++
T Consensus 109 ~id~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l~~-~-g~~~~~~~~l~~g~~~~~----------g~~~ 176 (360)
T 2wyl_A 109 QIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIG-W-GVPKERCIVVKPGDVVKV----------KDIE 176 (360)
T ss_dssp CCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHHH-H-TCCGGGEEECCTTCEEEE----------TTEE
T ss_pred CCCEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHHHH-c-CCChheEEEcCCCCEEEE----------CCEE
Confidence 3689999999999995 23322 22 7899999999988864 3 343335677888888877 7899
Q ss_pred EEEEecCCCC------------CC-----CCceEEEEEEECCeeEEEECCcCcCCCchhhhccchhhhhhccCCCccEEE
Q 040718 88 VIAIDANHCP------------GI-----LGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILY 150 (403)
Q Consensus 88 Vt~~~A~H~p------------G~-----~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvLi 150 (403)
|+++++.|.+ |. .+.+++|+|+.++.+++|+||+.+...+. .+. +..++|+++
T Consensus 177 v~~~~~~H~~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~~~-------~i~---~~~~~Dv~i 246 (360)
T 2wyl_A 177 IHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYA-------KHG---NEHQIDVAL 246 (360)
T ss_dssp EEEEECCCC------------------CCTTTBEEEEEEETTEEEEECTTCCCCTTHH-------HHH---HHSCCCEEE
T ss_pred EEEEeccCcccccccccccccccccccccCcccEEEEEEECCcEEEEeCCCCcCHHHH-------HHh---hCCCCCEEE
Confidence 9999998752 21 13489999999999999999999876531 111 124689999
Q ss_pred EcCC
Q 040718 151 LDNT 154 (403)
Q Consensus 151 lD~T 154 (403)
+...
T Consensus 247 l~~g 250 (360)
T 2wyl_A 247 GSYG 250 (360)
T ss_dssp EEBC
T ss_pred ecCC
Confidence 9765
No 23
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.35 E-value=1.9e-12 Score=123.80 Aligned_cols=109 Identities=20% Similarity=0.236 Sum_probs=80.9
Q ss_pred CCCeEEEcCCCC------------------CccEEEEcCCchhhhCCcccc--CCCCcEEeCHhhHhhccccCC-C----
Q 040718 2 EKGLISVDRWTE------------------GSQVYFLTHLHSDHTQGLSSA--WARGPLFCSRLTAKLFPLKFP-G---- 56 (403)
Q Consensus 2 ~~~~i~VD~f~~------------------~i~aifLTH~H~DHi~GL~~~--~~~~pIy~s~~T~~lL~~~~~-~---- 56 (403)
+++.|+||+... .+++||+||.|.||++|+..+ ..+.+||+++.+.+.+..... +
T Consensus 63 ~~~~iLID~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 142 (294)
T 3m8t_A 63 SQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKETGAQLVAGERDKPLLEGGYYPGDEKN 142 (294)
T ss_dssp TTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHHHCCEEEEEGGGHHHHHHTCBTTBTTC
T ss_pred CCceEEEECCCchhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhccCCEEEEChHHHHHHhcccccCcccc
Confidence 356799999641 378999999999999999875 257899999999988764310 0
Q ss_pred ----CC-ccceEeccCCCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEECCe----eEEEECCcCcC
Q 040718 57 ----LD-LSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGDFG----CLLYTGDFRWE 124 (403)
Q Consensus 57 ----~~-~~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~~----~vlyTGD~r~~ 124 (403)
+. ......+..++.+.+ ++++|+++.+ ||++| +++|+++.+++ +++|+||+.+.
T Consensus 143 ~~~~~~~~~~~~~~~~g~~~~~----------g~~~i~~~~~pgHt~g----~~~~~~~~~~~~~~~~~lf~GD~~~~ 206 (294)
T 3m8t_A 143 EDLAFPAVKVDRAVKEGDRVTL----------GDTTLTAHATPGHSPG----CTSWEMTVKDGKEDREVLFFCSGTVA 206 (294)
T ss_dssp GGGCCCCCCCSEEECTTCEEEE----------TTEEEEEEECCSSSTT----CEEEEEEEEETTEEEEEEECCCCCCT
T ss_pred ccCCCCCCCCceEeCCCCEEEe----------CCEEEEEEeCCCCCcc----CEEEEEEccCCCccceEEEEcCccCC
Confidence 00 011234555666665 8899999986 89999 99999986544 89999999643
No 24
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.32 E-value=7.6e-12 Score=118.22 Aligned_cols=107 Identities=14% Similarity=0.120 Sum_probs=78.5
Q ss_pred CCeEEEcCCCC------------------CccEEEEcCCchhhhCCccccC--CCCcEEeCHhhHhhccccC------CC
Q 040718 3 KGLISVDRWTE------------------GSQVYFLTHLHSDHTQGLSSAW--ARGPLFCSRLTAKLFPLKF------PG 56 (403)
Q Consensus 3 ~~~i~VD~f~~------------------~i~aifLTH~H~DHi~GL~~~~--~~~pIy~s~~T~~lL~~~~------~~ 56 (403)
++.|+||+... .+++||+||.|.||++|+..+. ++.+||+++.+.+.+.... +.
T Consensus 34 ~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 113 (263)
T 1k07_A 34 RGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQTKAKYMVMDEDVSVILSGGKSDFHYAN 113 (263)
T ss_dssp TEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHHHCCEEEEEHHHHHHHHTTTTTCTTTTT
T ss_pred CceEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHhcCCEEEEcHHHHHHHhcccccccccCc
Confidence 45789998631 2689999999999999998752 4789999999988875421 10
Q ss_pred -----CCc-cceEeccCCCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEEC--C--eeEEEECCcCc
Q 040718 57 -----LDL-SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGD--F--GCLLYTGDFRW 123 (403)
Q Consensus 57 -----~~~-~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~--~--~~vlyTGD~r~ 123 (403)
+.. .....+..++.+.+ ++++|+++.+ ||+|| +++|+++.. + ++++|+||+..
T Consensus 114 ~~~~~~~~~~~~~~~~~g~~~~~----------g~~~i~~i~~pGHt~g----~~~~~~~~~~~~~~~~~lf~GD~~~ 177 (263)
T 1k07_A 114 DSSTYFTQSTVDKVLHDGERVEL----------GGTVLTAHLTPGHTRG----CTTWTMKLKDHGKQYQAVIIGSIGV 177 (263)
T ss_dssp CGGGCCCCCCCSEEECTTCEEEE----------TTEEEEEEECCSSSTT----CEEEEEEEEETTEEEEEEEECCCCC
T ss_pred cccccCCCCCcceEeCCCCEEEE----------CCeEEEEEECCCCCCC----cEEEEEecccCCceeEEEEECCccc
Confidence 000 11233445555555 7888999887 89999 999999874 4 48999999876
No 25
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.32 E-value=9.9e-12 Score=124.82 Aligned_cols=120 Identities=16% Similarity=0.146 Sum_probs=87.5
Q ss_pred CccEEEEcCCchhhhC--Ccccc---CC-CCcEEeCHhhHhhccccCCCCCccceEeccCCCeEEEEeecCCCCCcCceE
Q 040718 14 GSQVYFLTHLHSDHTQ--GLSSA---WA-RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTFVE 87 (403)
Q Consensus 14 ~i~aifLTH~H~DHi~--GL~~~---~~-~~pIy~s~~T~~lL~~~~~~~~~~~i~~l~~~~~~~i~l~~~~~~~~~~v~ 87 (403)
.+++|||||.|.||++ ++..+ .. +.+||+++.+++.+.. + +++...+..+..++.+.+ ++++
T Consensus 133 ~iD~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l~~-~-g~~~~~~~~l~~g~~~~~----------g~~~ 200 (379)
T 3bv6_A 133 EIDAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWLG-W-GVPQERCIVAKVGDVLEI----------GDVK 200 (379)
T ss_dssp CCSEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHHH-H-TCCGGGEEECCTTCEEEE----------TTEE
T ss_pred CCCEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHHHH-c-CCChhhEEEeCCCCEEEE----------CCEE
Confidence 3689999999999995 33322 22 7899999999988864 2 343335677888888877 7899
Q ss_pred EEEEecCCC-------------CCC-----CCceEEEEEEECCeeEEEECCcCcCCCchhhhccchhhhhhccCCCccEE
Q 040718 88 VIAIDANHC-------------PGI-----LGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDIL 149 (403)
Q Consensus 88 Vt~~~A~H~-------------pG~-----~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvL 149 (403)
|+++++.|. +|. .+.+++|+|+.++.+++|+||+.+...+. .+.+ ..++|++
T Consensus 201 v~~~~~~H~~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~~~-------~i~~---~~~~Dv~ 270 (379)
T 3bv6_A 201 IRVLDSFDRTALVTLPKGVSSYDKAILDGMDERAVNYLIETSGGSVYHSGDSHYSNYYA-------KHGN---DYQIDVA 270 (379)
T ss_dssp EEEEECCCHHHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEETTEEEEECTTCCCCTTHH-------HHHH---HSCCSEE
T ss_pred EEEEecccccccccccccccccccccccccCCceEEEEEEeCCeEEEEeCCCCccHHHH-------HHhh---cCCCCEE
Confidence 999999884 220 02379999999999999999999876531 1111 1368999
Q ss_pred EEcCCC
Q 040718 150 YLDNTY 155 (403)
Q Consensus 150 ilD~Ty 155 (403)
++....
T Consensus 271 il~~g~ 276 (379)
T 3bv6_A 271 LLSYGE 276 (379)
T ss_dssp EEEBCC
T ss_pred EecCCC
Confidence 997653
No 26
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.26 E-value=2.7e-11 Score=113.54 Aligned_cols=95 Identities=19% Similarity=0.292 Sum_probs=66.4
Q ss_pred ccEEEEcCCchhhhCCccccCCCCcEEeCHhhHhhccccCCCC-----CccceEeccCCCeEEEEeecCCCCCcCceEEE
Q 040718 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGL-----DLSLIRVLDIGSWHSISVVSPSSGEKTFVEVI 89 (403)
Q Consensus 15 i~aifLTH~H~DHi~GL~~~~~~~pIy~s~~T~~lL~~~~~~~-----~~~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt 89 (403)
+++||+||+|.||++|+.. +.+.+||+++.+.+.+....... +......+ .++...+ ++++|.
T Consensus 101 I~~VilTH~H~DH~gg~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~i~~~ 168 (254)
T 3dha_A 101 LLYIISSHLHFDHAGGNGA-FTNTPIIVQRTEYEAALHREEYMKECILPHLNYKII-EGDYEVV----------PGVQLL 168 (254)
T ss_dssp CSEEECSCCSHHHHTTGGG-CSSSCEEEEHHHHHHHHHCTTSCGGGSCTTSCEEEE-CSSEEEE----------TTEEEE
T ss_pred CCEEEcCCChhhcCCChHH-CCCCEEEECHHHHHHhhccccccccccCcccceEEe-cCCcccc----------CCEEEE
Confidence 6899999999999999987 45889999999988775321100 00011111 1222222 566554
Q ss_pred EEecCCCCCCCCceEEEEEEEC-CeeEEEECCcCcCCC
Q 040718 90 AIDANHCPGILGCSVMLLFRGD-FGCLLYTGDFRWEAS 126 (403)
Q Consensus 90 ~~~A~H~pG~~~~Sv~fl~e~~-~~~vlyTGD~r~~~~ 126 (403)
..+ ||+|| +++|+++.. +++++||||+.+...
T Consensus 169 ~~p-GHt~g----~~~~~~~~~~~~~vl~~GD~~~~~~ 201 (254)
T 3dha_A 169 YTP-GHSPG----HQSLFIETEQSGSVLLTIDASYTKE 201 (254)
T ss_dssp ECC-SSSTT----CEEEEEEETTTEEEEEEETTCSSHH
T ss_pred ECC-CCCCC----CEEEEEEeCCCCEEEEEecccchhh
Confidence 443 99999 999999986 678999999988653
No 27
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.25 E-value=2.4e-11 Score=115.17 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=71.1
Q ss_pred ccEEEEcCCchhhhCCccccCCCCcEEeCHhhHhhccccC------CCC----------CccceEecc-CCCeEEEEeec
Q 040718 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKF------PGL----------DLSLIRVLD-IGSWHSISVVS 77 (403)
Q Consensus 15 i~aifLTH~H~DHi~GL~~~~~~~pIy~s~~T~~lL~~~~------~~~----------~~~~i~~l~-~~~~~~i~l~~ 77 (403)
+++|||||.|.||++|+..+ .+.+||+++.+.+.+.... ..+ ....+..+. .++.+++.
T Consensus 104 i~~VilTH~H~DH~gg~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~--- 179 (276)
T 2r2d_A 104 ISTVVLSHLHNDHAGCVEYF-GKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELA--- 179 (276)
T ss_dssp CSEEECSCCSTTTSTTGGGC-SSSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEE---
T ss_pred CCEEEecCcccccCCChhhC-CCCEEEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEec---
Confidence 67999999999999999975 7889999998887654211 000 011233444 24555551
Q ss_pred CCCCCcCceEEEEEecCCCCCCCCceEEEEEEECC-eeEEEECCcCcCC
Q 040718 78 PSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF-GCLLYTGDFRWEA 125 (403)
Q Consensus 78 ~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~-~~vlyTGD~r~~~ 125 (403)
++++|.....||++| +++|+++.++ ++++|+||+.+..
T Consensus 180 ------~~~~v~~~~pgHt~g----~~~~~~~~~~~~~vl~~GD~~~~~ 218 (276)
T 2r2d_A 180 ------PGVNLLNFGTGHASG----MLGLAVRLEKQPGFLLVSDACYTA 218 (276)
T ss_dssp ------TTEEEEEEESSSSSS----EEEEEEECSSSCEEEEEETTSCCH
T ss_pred ------CCEEEEeCCCCCCce----eEEEEEEcCCCceEEEEechhhhH
Confidence 368888882399999 9999999876 7999999998865
No 28
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.23 E-value=2.3e-11 Score=111.41 Aligned_cols=104 Identities=18% Similarity=0.088 Sum_probs=80.9
Q ss_pred CCCeEEEcCCC-----------------CCccEEEEcCCchhhhCCcccc-CCCCcEEeCHhhHhhccccCCCCCccceE
Q 040718 2 EKGLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSA-WARGPLFCSRLTAKLFPLKFPGLDLSLIR 63 (403)
Q Consensus 2 ~~~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~-~~~~pIy~s~~T~~lL~~~~~~~~~~~i~ 63 (403)
+++.|+||+.. ..+++||+||.|.||++|+..+ -.+.+||+++.+++.+...- .. ....
T Consensus 39 ~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~--~~-~~~~ 115 (219)
T 3l6n_A 39 KKGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNNKGIKTYATAKTNEFLKKDG--KA-TSTE 115 (219)
T ss_dssp TTEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHHTTCEEEECHHHHHHHHHTT--CC-CCSE
T ss_pred CCEEEEEeCCCChHHHHHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHhCCCEEEEcHHHHHHHHhcC--CC-CCcE
Confidence 35679999962 2478999999999999999875 23789999999999886431 11 1245
Q ss_pred eccCCCeEEEEeecCCCCCcCceEEEEEe--cCCCCCCCCceEEEEEEECCeeEEEECCcCcC
Q 040718 64 VLDIGSWHSISVVSPSSGEKTFVEVIAID--ANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124 (403)
Q Consensus 64 ~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~--A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~ 124 (403)
.+..++.+.+ ++++|+++. .||++| +++|+++ +.+++|+||+.+.
T Consensus 116 ~~~~g~~~~~----------g~~~i~~~~~~pgHt~g----~~~~~~~--~~~~lf~GD~~~~ 162 (219)
T 3l6n_A 116 IIKTGKPYRI----------GGEEFVVDFLGEGHTAD----NVVVWFP--KYNVLDGGCLVKS 162 (219)
T ss_dssp ECCTTSEEEE----------TTEEEEEECCCCSSSSS----CCEEEET--TTTEEEEETTSCC
T ss_pred ecCCCCEEEE----------CCEEEEEEeCCCCCCCC----CEEEEEC--CCCEEEECCeeec
Confidence 5667777776 889999987 499999 9999885 4579999998763
No 29
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.23 E-value=1.9e-11 Score=122.26 Aligned_cols=104 Identities=20% Similarity=0.187 Sum_probs=80.1
Q ss_pred CCeEEEcCCCC-----------------CccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHhhccccCCCCCccce
Q 040718 3 KGLISVDRWTE-----------------GSQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAKLFPLKFPGLDLSLI 62 (403)
Q Consensus 3 ~~~i~VD~f~~-----------------~i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~lL~~~~~~~~~~~i 62 (403)
++.++||+... .+++||+||.|.||++|+..+ +++.+||+++.+.+.+...++ .+...+
T Consensus 43 ~~~iliD~G~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~ 121 (402)
T 1e5d_A 43 EKTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEACQPEKIFTSSLGQKAMESHFH-YKDWPV 121 (402)
T ss_dssp SSCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHHCCSEEEEEHHHHHHHHHHHC-CSSCCE
T ss_pred CCEEEEeCCCCccHHHHHHHHHHhCCcccCCEEEeCCCCccccccHHHHHHHCCCCEEEEChHHHHHHHHHhC-CCCCce
Confidence 35689998532 468999999999999999875 357899999999988865442 322345
Q ss_pred EeccCCCeEEEEeecCCCCCcCceEEEEEec--CCCCCCCCceEEEEEEECCeeEEEECCcCc
Q 040718 63 RVLDIGSWHSISVVSPSSGEKTFVEVIAIDA--NHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123 (403)
Q Consensus 63 ~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A--~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~ 123 (403)
..+..++.+.+ ++++|+++++ ||+|| +++|++ ++.+++||||+..
T Consensus 122 ~~~~~g~~~~~----------g~~~~~~~~~p~gH~~~----~~~~~~--~~~~~l~~GD~~~ 168 (402)
T 1e5d_A 122 QVVKHGETLSL----------GKRTVTFYETRMLHWPD----SMVSWF--ADEKVLISNDIFG 168 (402)
T ss_dssp EEECTTCEEEC----------SSCEEEEEECTTSSSTT----CEEEEE--TTTTEEEEETTTC
T ss_pred EEcCCCCEEEE----------CCCEEEEEeCCCCCCCC----cEEEEE--CCCCEEEeccccc
Confidence 56667777665 7888898887 69999 998876 3568999999954
No 30
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.20 E-value=9.3e-11 Score=111.08 Aligned_cols=109 Identities=16% Similarity=0.115 Sum_probs=76.4
Q ss_pred CCeEEEcCCCC------------------CccEEEEcCCchhhhCCcccc--CCCCcEEeCHhhHhhccccCC-------
Q 040718 3 KGLISVDRWTE------------------GSQVYFLTHLHSDHTQGLSSA--WARGPLFCSRLTAKLFPLKFP------- 55 (403)
Q Consensus 3 ~~~i~VD~f~~------------------~i~aifLTH~H~DHi~GL~~~--~~~~pIy~s~~T~~lL~~~~~------- 55 (403)
++.++||+... .+++||+||.|.||++|+..+ ..+.+||+++.++..+.....
T Consensus 47 ~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~ 126 (269)
T 1sml_A 47 DGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRTGAKVAANAESAVLLARGGSDDLHFGD 126 (269)
T ss_dssp TEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHSSCEEEECHHHHHHHHTTTCSBTTTBT
T ss_pred CceEEEECCCCccHHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHhcCCeEEECHHHHHHHhcCCcccccccc
Confidence 45789998531 378999999999999999875 247899999999888753210
Q ss_pred --CCCc-cceEeccCCCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEE--CCe-eEEEECCcCcCC
Q 040718 56 --GLDL-SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRG--DFG-CLLYTGDFRWEA 125 (403)
Q Consensus 56 --~~~~-~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~--~~~-~vlyTGD~r~~~ 125 (403)
.+.. .....+..++.+.+ ++++|+++.+ ||++| +++|+++. +++ ..+++||+.+.+
T Consensus 127 ~~~~~~~~~~~~~~~g~~~~~----------g~~~i~~~~~pGHt~g----~~~~~~~~~~~~~~~~l~~gD~l~~~ 189 (269)
T 1sml_A 127 GITYPPANADRIVMDGEVITV----------GGIVFTAHFMAGHTPG----STAWTWTDTRNGKPVRIAYADSLSAP 189 (269)
T ss_dssp SSCCCCCCCSEECCTTCEEEE----------TTEEEEEEECCSSSTT----CEEEEEEEEETTEEEEEEECCCCCCT
T ss_pred ccCCCCCCCCeEeCCCCEEEE----------CCEEEEEEECCCCCcc----cEEEEEecccCCceeEEEEeccccCC
Confidence 0000 01234455555555 7889999987 89999 99999875 232 355569987643
No 31
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.20 E-value=2e-11 Score=111.18 Aligned_cols=106 Identities=25% Similarity=0.283 Sum_probs=77.3
Q ss_pred CCeEEEcCCCC-------------CccEEEEcCCchhhhCCccccC--CCCcEEeCHhhHhhcccc-------CCCCCc-
Q 040718 3 KGLISVDRWTE-------------GSQVYFLTHLHSDHTQGLSSAW--ARGPLFCSRLTAKLFPLK-------FPGLDL- 59 (403)
Q Consensus 3 ~~~i~VD~f~~-------------~i~aifLTH~H~DHi~GL~~~~--~~~pIy~s~~T~~lL~~~-------~~~~~~- 59 (403)
++.++||+... .+++||+||+|.||++|+..+. .+.+||+++.+.+.+... + +.+.
T Consensus 24 ~~~iLiD~G~~~~~l~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~ 102 (210)
T 2xf4_A 24 RLAALVDPGGDAEKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQHYGVPVIGPEKEDEFWLQGLPAQSRMF-GLDEC 102 (210)
T ss_dssp CEEEEECCCSCHHHHHHHHHHHTCEEEEEECSCSCHHHHTTHHHHHHHHTCCEECCCGGGHHHHHTHHHHHHHT-TCCCC
T ss_pred CcEEEEcCCCCHHHHHHHHHHcCCceeEEEECCCChhhhcCHHHHHHHcCCcEEEecchHHHHhccchhhhhhc-CCccc
Confidence 45799999641 3789999999999999998752 368999998887665431 2 1110
Q ss_pred ---cceEeccCCCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEECCeeEEEECCcCcCC
Q 040718 60 ---SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125 (403)
Q Consensus 60 ---~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~ 125 (403)
.....+..++.+.+ ++.+|+++.+ ||++| +++|+++ +.+++|+||+.+..
T Consensus 103 ~~~~~~~~~~~g~~~~~----------g~~~i~~~~~pgHt~g----~~~~~~~--~~~~lf~GD~~~~~ 156 (210)
T 2xf4_A 103 QPLTPDRWLNDGDRVSV----------GNVTLQVLHCPGHTPG----HVVFFDE--QSQLLISGDVIFKG 156 (210)
T ss_dssp CCCCCSBCCCTTCEEEE----------TTEEEEEEECCSSSTT----CEEEEET--TTTEEEEETSEETT
T ss_pred CCCCCceEECCCCEEEE----------CCeEEEEEECCCCCCC----cEEEEeC--CCCEEEECCEeccC
Confidence 11233455666655 7889999987 89999 9999875 56799999997653
No 32
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.20 E-value=2.9e-11 Score=113.51 Aligned_cols=104 Identities=20% Similarity=0.192 Sum_probs=74.5
Q ss_pred CCeEEEcCCC----------CCccEEEEcCCchhhhCCccccC--CCCcEEeCHhhHhhccc------------------
Q 040718 3 KGLISVDRWT----------EGSQVYFLTHLHSDHTQGLSSAW--ARGPLFCSRLTAKLFPL------------------ 52 (403)
Q Consensus 3 ~~~i~VD~f~----------~~i~aifLTH~H~DHi~GL~~~~--~~~pIy~s~~T~~lL~~------------------ 52 (403)
++.++||+.. ..+++||+||.|.||++|+..+. .+.+||+++.+.+.+..
T Consensus 29 ~~~iLiD~G~~~~~~~l~~~~~i~~vi~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 108 (261)
T 3adr_A 29 KLTVMIDAGVSNSIADFSFLDKLDYIVLTHLHIDHIGLLPELLQVYKAKVLVKSGFKKYLTSEDGLKKLNESAEKVLGDL 108 (261)
T ss_dssp SCEEEECCCCTTCCCCCTTCSCCCEEECSCCSGGGTTTHHHHHHHSCCEEEEETTCTHHHHSHHHHHHHHHHHHHHHTHH
T ss_pred CcEEEEeCCCCCChhhcCCCCCCcEEEECCCCccccCCHHHHHHHhCCeEEECHHHHHHhcCchhHHHHHHHHHHHHHHH
Confidence 5678999853 25789999999999999998651 37899999877654431
Q ss_pred --cCCC----CCccceEeccCCCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEECCeeEEEECCcCcC
Q 040718 53 --KFPG----LDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124 (403)
Q Consensus 53 --~~~~----~~~~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~ 124 (403)
.++. ++...+..+..++.+.+ ++++|+++++ ||++| +++|.+ .+++|+||+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~g~~~~~----------g~~~i~~~~~pGHt~~----~~~~~~----~~~lf~GD~~~~ 169 (261)
T 3adr_A 109 YYVYGGLEKKLDQDKVIEVEGNEEFDL----------GGYRMRLIYTPGHARH----HMSVLV----DDFLFTGDSAGA 169 (261)
T ss_dssp HHHHCCCCSCCCGGGEEEECSCCEEEC----------SSSEEEEEECTTSCTT----CEEEEE----TTEEEEETSSCE
T ss_pred HHHhcccccCCCccceEecCCCCEEEE----------CCEEEEEEECCCCCCc----cEEEEE----CCEEEEcCcccc
Confidence 1111 11123345555665554 7889999987 79999 999864 369999998654
No 33
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.19 E-value=2.7e-11 Score=114.99 Aligned_cols=102 Identities=14% Similarity=0.058 Sum_probs=78.5
Q ss_pred CCeEEEcCCC-----------------CCccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHhhccccCCCCCccce
Q 040718 3 KGLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAKLFPLKFPGLDLSLI 62 (403)
Q Consensus 3 ~~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~lL~~~~~~~~~~~i 62 (403)
++.++||+.. ..+++||+||.|.||++|+..+ +++.+||+++.+++.+...++ ......
T Consensus 51 ~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~l~~~~~-~~~~~~ 129 (262)
T 3hnn_A 51 DKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDLRAAFP-DDNLNI 129 (262)
T ss_dssp SSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHHCTTCEEEECHHHHHHHHHHSS-SSCCEE
T ss_pred CCEEEEECCCcchHHHHHHHHHHhCChhhCCEEEECCCCcchhchHHHHHHHCCCCEEEECHHHHHHHHHHhC-CCCCce
Confidence 3568999863 2478999999999999999875 468999999999998866553 222245
Q ss_pred EeccCCCeEEEEeecCCCCCcC-ceEEEEEec-C-CCCCCCCceEEEEEEECCeeEEEECCc
Q 040718 63 RVLDIGSWHSISVVSPSSGEKT-FVEVIAIDA-N-HCPGILGCSVMLLFRGDFGCLLYTGDF 121 (403)
Q Consensus 63 ~~l~~~~~~~i~l~~~~~~~~~-~v~Vt~~~A-~-H~pG~~~~Sv~fl~e~~~~~vlyTGD~ 121 (403)
..+..++.+.+ + +.+++++.+ | |+|| +++++++ ..+++||||+
T Consensus 130 ~~~~~g~~l~l----------g~~~~~~~i~tpg~Ht~g----~~~~~~~--~~~~lfsGD~ 175 (262)
T 3hnn_A 130 LPMRGKETLDL----------GKGHVLKFLPIPSPRWPA----GLCTYDV--QTQILYTDKI 175 (262)
T ss_dssp EECCSSCEEEC----------STTCEEEEEECCCSSCTT----CEEEEET--TTTEEEEETT
T ss_pred EEeCCCCEEEc----------CCCcEEEEEECCCCCCCC----eeEEEeC--CCCEEEEeec
Confidence 56666776665 6 788888887 6 9999 8877753 4579999999
No 34
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.18 E-value=1.7e-10 Score=107.45 Aligned_cols=107 Identities=17% Similarity=0.180 Sum_probs=72.2
Q ss_pred CCeEEEcCCC---------CCccEEEEcCCchhhhCCccccCCCCcEEeCHhhHhhccccCCCCCccceEeccCCCeEEE
Q 040718 3 KGLISVDRWT---------EGSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSI 73 (403)
Q Consensus 3 ~~~i~VD~f~---------~~i~aifLTH~H~DHi~GL~~~~~~~pIy~s~~T~~lL~~~~~~~~~~~i~~l~~~~~~~i 73 (403)
+..|+||++. ..+++|||||.|.||++ ++.+..+.+++ .+. ..+++
T Consensus 29 ~~~iLiD~g~~~~~~~~~~~~id~VliTH~H~DH~~-~~~l~~~~~vi-----------------------~~~-g~~~~ 83 (220)
T 1vjn_A 29 GKTIVTDPFDESVGYPIPNVTADVVTESHQHFDHNA-HHLVKGNFRVI-----------------------DRP-GAYTV 83 (220)
T ss_dssp TEEEEESCCC-----CCCCCBCSEEECSSCC---CG-GGGCBSSCEEE-----------------------CSS-EEEEE
T ss_pred CEEEEEcCCCCcCCCCcCCCCcCEEEECCCCCCCCC-chHhcCCCEEE-----------------------cCC-CeEEE
Confidence 4579999964 35789999999999998 66432222222 011 13444
Q ss_pred EeecCCCCCcCceEEEEEecCCCCCC---CCceEEEEEEECCeeEEEECCcCcCCCchhhhccchhhhhhccCCCccEEE
Q 040718 74 SVVSPSSGEKTFVEVIAIDANHCPGI---LGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDDVVDILY 150 (403)
Q Consensus 74 ~l~~~~~~~~~~v~Vt~~~A~H~pG~---~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~~~DvLi 150 (403)
++++|+++++.|.++. .+.+++|+|+.++.+++|+||+.+.+.. ..+..+ .++|+++
T Consensus 84 ----------~~~~I~~~~~~H~~~~g~~~g~~~g~~i~~~g~~i~~~GDt~~~~~~--------~~~~~~--~~~Dvli 143 (220)
T 1vjn_A 84 ----------NGVKIKGVETFHDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHVLTP--------AQVEEI--GEIDVLL 143 (220)
T ss_dssp ----------TTEEEEEEEEEEC-------CEEEEEEEEETTEEEEECTTCCSCCCH--------HHHHHH--CCCSEEE
T ss_pred ----------CCEEEEEEeeecCCCCCccCCCcEEEEEEECCeEEEEeCCCCCcchH--------HHHHhh--CCCCEEE
Confidence 7899999999996520 1236999999999999999999987642 133444 5799999
Q ss_pred EcCC
Q 040718 151 LDNT 154 (403)
Q Consensus 151 lD~T 154 (403)
+++.
T Consensus 144 l~~g 147 (220)
T 1vjn_A 144 VPVG 147 (220)
T ss_dssp EECC
T ss_pred EcCC
Confidence 9984
No 35
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.18 E-value=5.7e-11 Score=118.76 Aligned_cols=92 Identities=16% Similarity=0.306 Sum_probs=72.1
Q ss_pred CccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHhhccccCCCCC-ccceEeccCCCeEEEEeecCCCCCcCceEEE
Q 040718 14 GSQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAKLFPLKFPGLD-LSLIRVLDIGSWHSISVVSPSSGEKTFVEVI 89 (403)
Q Consensus 14 ~i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~lL~~~~~~~~-~~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt 89 (403)
.+++||+||.|.||++|+..+ +++.+||+++.+.+.+...+. .+ ......+..++.+.+ ++.+|+
T Consensus 75 ~i~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~----------g~~~i~ 143 (404)
T 2ohh_A 75 RVDYIIQNHVEKDHSGVLVELHRRFPEAPIYCTEVAVKGLLKHYP-SLREAEFMTVKTGDVLDL----------GGKTLT 143 (404)
T ss_dssp CCCEEECSCCSHHHHTTHHHHHHHSTTCCEEECHHHHHHHHHHCG-GGGGSCEEECCTTCEEEC----------SSCEEE
T ss_pred CCCEEEeCCCCCcccchHHHHHHHCCCCEEEECHHHHHHHHHHhc-ccccCCceEcCCCCEEEE----------CCEEEE
Confidence 468999999999999999875 458899999999988865442 22 123455666766655 788899
Q ss_pred EEec--CCCCCCCCceEEEEEEECCeeEEEECCcC
Q 040718 90 AIDA--NHCPGILGCSVMLLFRGDFGCLLYTGDFR 122 (403)
Q Consensus 90 ~~~A--~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r 122 (403)
++++ ||++| +++|+++. .+++||||+.
T Consensus 144 ~~~~p~gH~~~----~~~~~~~~--~~~lf~GD~~ 172 (404)
T 2ohh_A 144 FLETPLLHWPD----SMFTLLDE--DGILFSNDAF 172 (404)
T ss_dssp EEECTTSSSTT----CEEEEEET--TTEEECTTTT
T ss_pred EEeCCCCCCCC----ceEEEECC--CcEEEecCcc
Confidence 9887 69999 99998863 4699999986
No 36
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.17 E-value=7.6e-11 Score=117.62 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=79.1
Q ss_pred CeEEEcCCC-----------------CCccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHhhccccCCCCCccceE
Q 040718 4 GLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAKLFPLKFPGLDLSLIR 63 (403)
Q Consensus 4 ~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~lL~~~~~~~~~~~i~ 63 (403)
+.++||+.. ..+++||+||.|.||++|+..+ +++.+||+++.+.+.+...+ +.+.....
T Consensus 45 ~~iliD~g~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~l~~~~-~~~~~~~~ 123 (398)
T 1ycg_A 45 KTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELCPDAHVLCTQRAFDSLKAHY-SHIDFNYT 123 (398)
T ss_dssp SCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHCTTCEEEECHHHHHHHHHHT-CSCCCEEE
T ss_pred CEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHHCCCCEEEEcHHHHHHHHHHh-CCCCcceE
Confidence 468999854 2578999999999999999875 45789999999998886554 23222345
Q ss_pred eccCCCeEEEEeecCCCCCcCceEEEEEec--CCCCCCCCceEEEEEEECCeeEEEECCcCc
Q 040718 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDA--NHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123 (403)
Q Consensus 64 ~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A--~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~ 123 (403)
.+..++.+.+ ++.+|+++++ ||+|| +++|++ ++.+++||||+..
T Consensus 124 ~~~~g~~~~~----------g~~~~~~~~~p~gH~~~----~~~~~~--~~~~~lf~GD~~~ 169 (398)
T 1ycg_A 124 IVKTGTSVSL----------GKRSLTFIEAPMLHWPD----SMFTYV--PEEALLLPNDAFG 169 (398)
T ss_dssp ECCTTCEEEC----------SSCEEEEEECTTSSSTT----CEEEEE--TTTTEEEEETTTC
T ss_pred EeCCCCEEee----------CCcEEEEEeCCCCCCCC----cEEEEE--CCCcEEEeccccc
Confidence 5666776655 7888888875 69999 988876 3567999999953
No 37
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.16 E-value=1.6e-10 Score=110.50 Aligned_cols=109 Identities=19% Similarity=0.227 Sum_probs=78.4
Q ss_pred CCCeEEEcCCCC------------------CccEEEEcCCchhhhCCccccC--CCCcEEeCHhhHhhccccCCC-----
Q 040718 2 EKGLISVDRWTE------------------GSQVYFLTHLHSDHTQGLSSAW--ARGPLFCSRLTAKLFPLKFPG----- 56 (403)
Q Consensus 2 ~~~~i~VD~f~~------------------~i~aifLTH~H~DHi~GL~~~~--~~~pIy~s~~T~~lL~~~~~~----- 56 (403)
+++.|+||+... .+++||+||.|.||++|+..+. ++.+||+++.+.+.+......
T Consensus 66 ~~~~iLiD~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~l~~~~~~~~~~~ 145 (303)
T 4ax1_B 66 DAGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKATGAPVYARAPAIDTLKRGLPDRTDPN 145 (303)
T ss_dssp TTCEEEECCBSTTCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHHCCCEEEEHHHHHHHHHTSCCTTSTT
T ss_pred CCcEEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhcCCEEEEcHHHHHHHhccccCccccc
Confidence 456899999631 1689999999999999998752 478999999999888644210
Q ss_pred ------C-CccceEeccCCCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEECC---eeEEEECCcCcC
Q 040718 57 ------L-DLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGDF---GCLLYTGDFRWE 124 (403)
Q Consensus 57 ------~-~~~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~---~~vlyTGD~r~~ 124 (403)
. .......+..++.+.+ ++.+|+++.+ ||++| +++|+++... ...+++||..+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~g~~~~~----------g~~~v~~~~~pgHt~g----~~~~~~~~~~~~~~~~~l~gD~l~~ 210 (303)
T 4ax1_B 146 FEVAEPVAPVANIVTLADDGVVSV----------GPLALTAVASPGHTPG----GTSWTWRSCEGDDCRQMVYADSLTA 210 (303)
T ss_dssp GGGCCCCCCCSCEEEECTTCEEEE----------TTEEEEEEECCSSSTT----CEEEEEEEEETTEEEEEEECCCCCC
T ss_pred cccccCcCCCCCcEEeCCCCEEEE----------CCeEEEEEeCCCCCcc----ceEEEEEecCCCceeEEEEeCCccc
Confidence 0 0112345566666666 8889999986 89999 9999997632 123555998764
No 38
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.15 E-value=5.5e-11 Score=113.60 Aligned_cols=102 Identities=12% Similarity=0.037 Sum_probs=65.9
Q ss_pred ccEEEEcCCchhhhCCcccc-----CCCCcEEeCHhhHhhccccCCC----CCccceEeccCCCeEEEEeecCCCCCcCc
Q 040718 15 SQVYFLTHLHSDHTQGLSSA-----WARGPLFCSRLTAKLFPLKFPG----LDLSLIRVLDIGSWHSISVVSPSSGEKTF 85 (403)
Q Consensus 15 i~aifLTH~H~DHi~GL~~~-----~~~~pIy~s~~T~~lL~~~~~~----~~~~~i~~l~~~~~~~i~l~~~~~~~~~~ 85 (403)
+++|||||+|.||++|+..+ +++.+||+++.+.+.+...... +....+.++. ..... +..... ..++
T Consensus 101 Id~IllTH~H~DHigg~~~l~~~~~fp~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~-l~~g 176 (280)
T 3esh_A 101 IDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYS--NKLIL-FEKHFE-PVPG 176 (280)
T ss_dssp CCEEECSCCCHHHHGGGSCTTSCCSSTTCEEEEEHHHHHHHHSCCTTGGGTSCGGGCCGGG--GGEEE-ESSEEC-SSTT
T ss_pred CCEEEeCCCcccccCcccccccccCCCCCEEEECHHHHHHhhCcccccccchhhhhhhhhh--heEEE-eCCCCe-EcCC
Confidence 56999999999999999854 3589999999998877532110 0001111111 11111 100000 1134
Q ss_pred eEEEEEec-CCCCCCCCceEEEEEEECCeeEEEECCcCcCCC
Q 040718 86 VEVIAIDA-NHCPGILGCSVMLLFRGDFGCLLYTGDFRWEAS 126 (403)
Q Consensus 86 v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~~ 126 (403)
+++ +.+ ||+|| +++|+++.++++++||||+.+.+.
T Consensus 177 i~~--~~~pGHt~g----~~~~~i~~~~~~vlftGD~~~~~~ 212 (280)
T 3esh_A 177 IKM--QHSGGHSFG----HTIITIESQGDKAVHMGDIFPTTA 212 (280)
T ss_dssp EEE--EECCSSSTT----CEEEEEEETTEEEEECGGGSCSGG
T ss_pred EEE--EEcCCCCcc----cEEEEEEECCcEEEEEEccCCchh
Confidence 444 554 99999 999999998899999999988653
No 39
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.15 E-value=3.5e-11 Score=123.84 Aligned_cols=108 Identities=19% Similarity=0.241 Sum_probs=83.7
Q ss_pred CCeEEEcCCCC-------------CccEEEEcCCchhhhCCcccc--CCCCcEEeCHhhHhhccccCCCCCccceEeccC
Q 040718 3 KGLISVDRWTE-------------GSQVYFLTHLHSDHTQGLSSA--WARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDI 67 (403)
Q Consensus 3 ~~~i~VD~f~~-------------~i~aifLTH~H~DHi~GL~~~--~~~~pIy~s~~T~~lL~~~~~~~~~~~i~~l~~ 67 (403)
+..|+||+... .+++||+||.|.||++|+..+ ..+.+||+++.+...+...+. .......+..
T Consensus 27 ~~~ilID~g~~~~~~~~~l~~~~~~i~~Il~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~ 104 (474)
T 3tp9_A 27 GEACVIDPARDVEPYLLTAKREGLRIVAALETHIHADFVSGAREMADRAGAAICVSDEGPPEWKSEYV--KAYPHRLLKD 104 (474)
T ss_dssp CEEEEESCCSCCHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHHCCEEEEECCSCGGGCCGGG--GGSSEEEECT
T ss_pred CEEEEEcCCCChHHHHHHHHHcCCeeEEEEcCcCchhhhCCHHHHHHHHCCcEEEcCcchhhhccccc--ccccceECCC
Confidence 45699999742 378999999999999999875 247899999887766644331 1112355667
Q ss_pred CCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEECCe-----eEEEECCcCcCCC
Q 040718 68 GSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGDFG-----CLLYTGDFRWEAS 126 (403)
Q Consensus 68 ~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~~-----~vlyTGD~r~~~~ 126 (403)
++.+.+ ++++|+++.+ ||+|| +++|+++..++ +++||||+.+...
T Consensus 105 g~~~~~----------g~~~i~~i~tPGHt~g----~~~~~~~~~~~~~~~~~~lftGD~lf~~~ 155 (474)
T 3tp9_A 105 GDELHF----------GNVRIVVMHTPGHTPE----HVSYLLYDGKTSPDVPMALFSGDFVFVGD 155 (474)
T ss_dssp TCEEEE----------TTEEEEEEECCSSSSS----CEEEEEEETTTEEEEEEEEEEETSEETTE
T ss_pred CCEEEE----------CCEEEEEEECCCCCCC----CEEEEEecCCCCCCCceEEEeCCccccCC
Confidence 777766 8899999988 99999 99999988755 7999999987554
No 40
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.14 E-value=7.4e-11 Score=109.09 Aligned_cols=104 Identities=16% Similarity=0.151 Sum_probs=70.0
Q ss_pred CCeEEEcCCCC------------------CccEEEEcCCchhhhCCccccCCCCcEEeCHhhHhhccccCCCCCc-----
Q 040718 3 KGLISVDRWTE------------------GSQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFPGLDL----- 59 (403)
Q Consensus 3 ~~~i~VD~f~~------------------~i~aifLTH~H~DHi~GL~~~~~~~pIy~s~~T~~lL~~~~~~~~~----- 59 (403)
++.|+||+... .+++||+||+|.||++|+..+ .+.+||+++.. +...+..+..
T Consensus 44 ~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~~~~-~~~~v~~~~~~---~~~~~~~~~~~~~~~ 119 (221)
T 1ztc_A 44 DRRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIFNSVLF-ENATFYVHEVY---KTKNYLSFGTIVGRI 119 (221)
T ss_dssp TEEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGGGGC-TTCEEEEEGGG---GGSCGGGGCHHHHHH
T ss_pred CeEEEEECCCCcchHHHHHHHHHcCCCHHHCcEEEEcCCccccCCchhhC-CCCEEEEeHHH---hhhhhhhhccchhhh
Confidence 45789999631 368999999999999999874 47899999872 2211110000
Q ss_pred --------cceEeccCCCeEEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECC-eeEEEECCcCcCC
Q 040718 60 --------SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDF-GCLLYTGDFRWEA 125 (403)
Q Consensus 60 --------~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~-~~vlyTGD~r~~~ 125 (403)
..+..+..++. + ..++++|...+ ||++| +++|+++.++ ++++||||+.+..
T Consensus 120 ~~~~~~~~~~~~~~~~g~~--l--------~~~~~~v~~~p-GHt~g----~~~~~~~~~~~~~vlftGD~~~~~ 179 (221)
T 1ztc_A 120 YSKVISSWKNVVLLKGEES--L--------FDEKVKVFHTP-WHARE----HLSFLLDTENAGRVLITGDITPNR 179 (221)
T ss_dssp HHHHHHTCCSEEEECSCCE--E--------TTTTEEEEECC-SSSTT----CEEEEEEETTTEEEEECGGGSCSH
T ss_pred hhhccccccceEEeCCCCE--E--------ECCeEEEEEcC-CCCcc----cEEEEEEcCCCCeEEEEeCccccc
Confidence 11222332221 1 11366666665 99999 9999999876 7899999998653
No 41
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.14 E-value=9.2e-11 Score=113.48 Aligned_cols=98 Identities=17% Similarity=0.276 Sum_probs=73.9
Q ss_pred CccEEEEcCCchhhhCCcccc--CCCCcEEeCHhhHhhccc---cCCCCCc-------cceEeccCCCeEEEEeecCCCC
Q 040718 14 GSQVYFLTHLHSDHTQGLSSA--WARGPLFCSRLTAKLFPL---KFPGLDL-------SLIRVLDIGSWHSISVVSPSSG 81 (403)
Q Consensus 14 ~i~aifLTH~H~DHi~GL~~~--~~~~pIy~s~~T~~lL~~---~~~~~~~-------~~i~~l~~~~~~~i~l~~~~~~ 81 (403)
.+++||+||.|.||++|+..+ ..+.+||+++.+.+++.. .+ +.+. .....+..++.+.+
T Consensus 64 ~i~~Il~TH~H~DH~gg~~~l~~~~~a~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~l~~-------- 134 (298)
T 4efz_A 64 RVRWLLETHVHADHLSAAPYLKTRVGGEIAIGRHVTRVQDVFGKLF-NAGPAFAHDGSQFDRLLDDGDTLAL-------- 134 (298)
T ss_dssp EEEEEECSSCCSSSBCCHHHHHHHHCCEEEEETTHHHHHHHHHHHT-TCCTTSCSSSTTSSEEECTTCEEEE--------
T ss_pred cceEEEECCCchhhhhhHHHHHHHhCCcEEEChhHHHHHHHHHHhc-CCcccccccccCCCEEeCCCCEEEE--------
Confidence 368999999999999999875 237899999887765431 11 1110 11245566676666
Q ss_pred CcCceEEEEEec-CCCCCCCCceEEEEEEECCee------EEEECCcCcCCC
Q 040718 82 EKTFVEVIAIDA-NHCPGILGCSVMLLFRGDFGC------LLYTGDFRWEAS 126 (403)
Q Consensus 82 ~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~~~------vlyTGD~r~~~~ 126 (403)
++++|+++.+ ||+|| +++|+++..+++ ++||||+.+.++
T Consensus 135 --g~~~i~vi~tPGHT~g----~~~~~~~~~~~~~~~~~~~lftGD~l~~~~ 180 (298)
T 4efz_A 135 --GALSIRAMHTPGHTPA----CMTYVVTEAHAAHDARDAAAFVGDTLFMPD 180 (298)
T ss_dssp --TTEEEEEEECCSSSTT----CEEEEEEETTCCGGGCBCEEECCSSBCCTT
T ss_pred --CCEEEEEEECCCCCcc----cEEEEECCCcccccCCceEEEEcCccccCC
Confidence 8899999988 89999 999999987666 999999987653
No 42
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.13 E-value=1.2e-10 Score=107.27 Aligned_cols=103 Identities=17% Similarity=0.142 Sum_probs=77.0
Q ss_pred CCeEEEcCCC-----------------CCccEEEEcCCchhhhCCccccC-CCCcEEeCHhhHhhccccCCCCCccceEe
Q 040718 3 KGLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSAW-ARGPLFCSRLTAKLFPLKFPGLDLSLIRV 64 (403)
Q Consensus 3 ~~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~~-~~~pIy~s~~T~~lL~~~~~~~~~~~i~~ 64 (403)
++.++||+.. ..+++||+||.|.||++|+..+. .+.+||+++.+.+.+....... ....
T Consensus 36 ~~~iLiD~G~~~~~~~~~~~~l~~~~g~~i~~vi~TH~H~DH~gg~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~~ 112 (223)
T 1m2x_A 36 KGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFGKIGAKTYSTKMTDSILAKENKPR---AQYT 112 (223)
T ss_dssp TEEEEESCCSSGGGHHHHHHHHHHHHCCCEEEEECSSSSTTTTTTHHHHHHTTCEEEEEHHHHHHHHHTTCCC---CSEE
T ss_pred CEEEEEeCCCChhHHHHHHHHHHHHhCCCeEEEEeccCCccccCchhhHhhCCCeEEEcHHHHHHHHhcCccC---Ccee
Confidence 4578999862 24689999999999999998652 5789999999998886432111 1234
Q ss_pred ccCCCeEEEEeecCCCCCcCceEEEEEe--cCCCCCCCCceEEEEEEECCeeEEEECCcCcC
Q 040718 65 LDIGSWHSISVVSPSSGEKTFVEVIAID--ANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124 (403)
Q Consensus 65 l~~~~~~~i~l~~~~~~~~~~v~Vt~~~--A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~ 124 (403)
+..++.+.+ ++.+|+++. .||++| +++|+++ +.+++|+||+...
T Consensus 113 ~~~g~~~~~----------g~~~i~~~~~~pgHt~~----~~~~~~~--~~~~lf~GD~~~~ 158 (223)
T 1m2x_A 113 FDNNKSFKV----------GKSEFQVYYPGKGHTAD----NVVVWFP--KEKVLVGGCIIKS 158 (223)
T ss_dssp ESSCEEEEE----------TTEEEEEECCCSSSSSS----CCEEEET--TTTEEEEETTSCC
T ss_pred cCCCceEEE----------CCEEEEEEecCCCCCCC----CEEEEEC--CCCEEEEeccccc
Confidence 555655555 788999984 599999 9999875 4579999996654
No 43
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.13 E-value=3.2e-11 Score=112.59 Aligned_cols=111 Identities=14% Similarity=0.136 Sum_probs=73.4
Q ss_pred CCeEEEcCCC-----------------CCccEEEEcCCchhhhCCccccC-CCCcEEeCHhhHhhccccCCCCCccceEe
Q 040718 3 KGLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSAW-ARGPLFCSRLTAKLFPLKFPGLDLSLIRV 64 (403)
Q Consensus 3 ~~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~~-~~~pIy~s~~T~~lL~~~~~~~~~~~i~~ 64 (403)
++.|+||+.. ..+++||+||.|.||++|+..+. .+.+||+++.+++++........ .....
T Consensus 57 ~~~iLID~G~~~~~~~~l~~~l~~~~~~~i~~vi~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~ 135 (243)
T 4hl2_A 57 GRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEGMVAA-QHSLT 135 (243)
T ss_dssp TEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHTTCEEEEEHHHHHHGGGTTCCCC-SEEEC
T ss_pred CcEEEEECCCCCccHHHHHHHHHHhhCCCeeEEEECCCCccccCCHHHHHhCCCeEEECHHHHHHHhccccccc-ccccc
Confidence 4579999862 14789999999999999998752 37899999999998865321111 11011
Q ss_pred ccCCCeEEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCeeEEEECCcCcC
Q 040718 65 LDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124 (403)
Q Consensus 65 l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~ 124 (403)
.+.... +.+.+....++++|.....||++| +++|+++ +.+++||||+.+.
T Consensus 136 ~~~~~~----~~~g~~~~~g~~~v~~~~pGHt~g----~~~~~~~--~~~~lf~GD~~~~ 185 (243)
T 4hl2_A 136 FAANGW----VEPATAPNFGPLKVFYPGPGHTSD----NITVGID--GTDIAFGGCLIKD 185 (243)
T ss_dssp BCTTSB----BCGGGSTTCTTEEEECCCSSSSTT----CCEEEET--TTTEEECTTTCCC
T ss_pred cccceE----ecCCCeEEECCEEEEeCCCCCCcC----CEEEEEc--CCCEEEEcceeee
Confidence 111110 111111123788883345699999 9999885 4579999999884
No 44
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.12 E-value=9.2e-11 Score=111.48 Aligned_cols=98 Identities=26% Similarity=0.287 Sum_probs=76.1
Q ss_pred CeEEEcCCC------------CCccEEEEcCCchhhhCCccccC--CCCcEEeCHhhHhhccccCCCCCccceEeccCCC
Q 040718 4 GLISVDRWT------------EGSQVYFLTHLHSDHTQGLSSAW--ARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGS 69 (403)
Q Consensus 4 ~~i~VD~f~------------~~i~aifLTH~H~DHi~GL~~~~--~~~pIy~s~~T~~lL~~~~~~~~~~~i~~l~~~~ 69 (403)
..++||+.. ..+++||+||.|.||++|+..+. .+.+||+++.+.+.+. + ....+..++
T Consensus 24 ~~~lID~g~~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~----~----~~~~~~~g~ 95 (254)
T 1xm8_A 24 TVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAMDKDRIP----G----IDMALKDGD 95 (254)
T ss_dssp CEEEECCSSHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHHCCEEEEEGGGGGGST----T----EEEEECTTC
T ss_pred EEEEEeCCCHHHHHHHHHHcCCCccEEEECCCCCcccccHHHHHHHcCCeEEEchhhhhcCC----C----CceeeCCCC
Confidence 468999863 24789999999999999998752 3689999988776543 1 123456677
Q ss_pred eEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEECCeeEEEECCcCcCC
Q 040718 70 WHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125 (403)
Q Consensus 70 ~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~ 125 (403)
.+.+ ++.+|+++.+ ||+|| +++|+++. .+++||||+.+..
T Consensus 96 ~~~l----------g~~~~~vi~tPGHt~g----~~~~~~~~--~~~lftGD~l~~~ 136 (254)
T 1xm8_A 96 KWMF----------AGHEVHVMDTPGHTKG----HISLYFPG--SRAIFTGDTMFSL 136 (254)
T ss_dssp EEEE----------TTEEEEEEECCSSSSS----CEEEEEGG--GTEEEEETTEETT
T ss_pred EEEE----------CCEEEEEEECCCCCCC----cEEEEECC--CCEEEEcCccccC
Confidence 6666 7889999987 99999 99999863 4699999998754
No 45
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.11 E-value=8.3e-11 Score=111.15 Aligned_cols=98 Identities=19% Similarity=0.131 Sum_probs=76.6
Q ss_pred CCeEEEcCCCC--------------CccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHhhccccCCCCCccceEec
Q 040718 3 KGLISVDRWTE--------------GSQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65 (403)
Q Consensus 3 ~~~i~VD~f~~--------------~i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~lL~~~~~~~~~~~i~~l 65 (403)
+..++||+... .+++||+||.|.||++|+..+ +.+.+||+++.+.. . ....+
T Consensus 28 ~~~ilID~g~~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~-----~------~~~~~ 96 (245)
T 2gcu_A 28 KPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGS-----K------ADLFL 96 (245)
T ss_dssp CEEEEESCBGGGHHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHHSTTCEEEEEGGGCC-----C------CSEEE
T ss_pred CcEEEEeCCCchHHHHHHHHHHCCCeeeEEEeCCCChhhhhhHHHHHHhCCCCeEEecccccc-----c------CCEEc
Confidence 35789999642 368999999999999999875 56789999987632 1 12345
Q ss_pred cCCCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEECC----eeEEEECCcCcCC
Q 040718 66 DIGSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGDF----GCLLYTGDFRWEA 125 (403)
Q Consensus 66 ~~~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~----~~vlyTGD~r~~~ 125 (403)
..++.+.+ ++++|+++.+ ||++| +++|+++..+ .+++||||+.+..
T Consensus 97 ~~g~~~~~----------g~~~i~v~~tpGHt~g----~~~~~~~~~~~~~~~~~lftGD~~~~~ 147 (245)
T 2gcu_A 97 EPGDKVSI----------GDIYLEVRATPGHTAG----CVTYVTGEGADQPQPRMAFTGDAVLIR 147 (245)
T ss_dssp CTTCEEEE----------TTEEEEEEECCSSSTT----CEEEEECCSTTSCSSCEEEEETTSBTT
T ss_pred CCCCEEEE----------CCEEEEEEECCCCCCC----CEEEEECCccccccccEEEECCccccC
Confidence 66777766 7889999987 99999 9999997653 3799999998764
No 46
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.11 E-value=1.4e-10 Score=109.93 Aligned_cols=93 Identities=24% Similarity=0.214 Sum_probs=63.2
Q ss_pred ccEEEEcCCchhhhCCccccCCCCcEEeCHhhHhhccccCC----C-CCc------------------------cceEec
Q 040718 15 SQVYFLTHLHSDHTQGLSSAWARGPLFCSRLTAKLFPLKFP----G-LDL------------------------SLIRVL 65 (403)
Q Consensus 15 i~aifLTH~H~DHi~GL~~~~~~~pIy~s~~T~~lL~~~~~----~-~~~------------------------~~i~~l 65 (403)
+++||+||+|.||++|+..+ .+.+||+++.+.+.+..... . +.. ..+..+
T Consensus 89 i~~VilTH~H~DH~gg~~~~-~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (274)
T 3aj3_A 89 IDVVVNSHFHFDHCGGNKYF-PHAKKICHRSEVPQACNPQPFEHLGYSDLSFSAEAAEARGATAQLLEGTTRANSTFEGI 167 (274)
T ss_dssp CCEEECSCCSGGGTTTGGGC-TTSEEEEETTHHHHHHSCCGGGTTTTCCCTTCHHHHHHHTCGGGCCTTCCSTTSCEEEE
T ss_pred CCEEEecCcCcccCCchhhC-CCCEEEECHHHHHHHhCcCCccccccChhhhccccccccccccccccccccCCCCceEc
Confidence 68999999999999999874 78899999988876642110 0 000 011111
Q ss_pred cCCCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEEC-CeeEEEECCcCcCC
Q 040718 66 DIGSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGD-FGCLLYTGDFRWEA 125 (403)
Q Consensus 66 ~~~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~-~~~vlyTGD~r~~~ 125 (403)
.+..++ ++ +|+++.+ ||+|| +++|+++.+ +++++|+||+.+..
T Consensus 168 --~~~~~l----------~g-~~~v~~~pGHt~g----~~~~~~~~~~~~~~lf~GD~~~~~ 212 (274)
T 3aj3_A 168 --DGDVDL----------AR-GVKLISTPGHSIG----HYSLLVEFPRRKPILFTIDAAYTQ 212 (274)
T ss_dssp --CSSEEE----------ET-TEEEEECTTSSTT----CEEEEECCSSSCCEEEEETTCSSH
T ss_pred --CCcccc----------CC-EEEEEECCCCCce----eeEEEEECCCCCEEEEEechhhhH
Confidence 112222 45 3444544 89999 999999865 56899999987754
No 47
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.10 E-value=1.4e-10 Score=107.66 Aligned_cols=103 Identities=15% Similarity=0.138 Sum_probs=76.7
Q ss_pred CCeEEEcCCC-----------------CCccEEEEcCCchhhhCCcccc-CCCCcEEeCHhhHhhccccCCCCCccceEe
Q 040718 3 KGLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSA-WARGPLFCSRLTAKLFPLKFPGLDLSLIRV 64 (403)
Q Consensus 3 ~~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~-~~~~pIy~s~~T~~lL~~~~~~~~~~~i~~ 64 (403)
++.++||+.. ..+++||+||.|.||++|+..+ ..+.+||+++.+.+++... +++. ....
T Consensus 46 ~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~~~~~v~~~~~~~~~~~~~--~~~~-~~~~ 122 (232)
T 1a7t_A 46 HQAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQRKGVQSYANQMTIDLAKEK--GLPV-PEHG 122 (232)
T ss_dssp TEEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHHTTCEEEEEHHHHHHHHHH--TCCC-CSEE
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCCccccCCHHHHHhCCCeEEEcHHHHHHHHhc--CCCC-Ccee
Confidence 4578999963 1468999999999999999865 2478999999998887542 2211 1233
Q ss_pred ccCCCeEEEEeecCCCCCcCceEEEEEe--cCCCCCCCCceEEEEEEECCeeEEEECCcCcC
Q 040718 65 LDIGSWHSISVVSPSSGEKTFVEVIAID--ANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124 (403)
Q Consensus 65 l~~~~~~~i~l~~~~~~~~~~v~Vt~~~--A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~ 124 (403)
+..++.+.+ ++..|+++. .||++| +++|+++ ..+++|+||+.+.
T Consensus 123 ~~~g~~~~~----------g~~~i~~~~~~pgHt~g----~~~~~~~--~~~~lf~GD~~~~ 168 (232)
T 1a7t_A 123 FTDSLTVSL----------DGMPLQCYYLGGGHATD----NIVVWLP--TENILFGGCMLKD 168 (232)
T ss_dssp ESSEEEEEE----------TTEEEEEECCCCSSSTT----CCEEEET--TTTEEEEETTSCC
T ss_pred cCCCCEEEE----------CCeEEEEEeCCCCCCCC----CEEEEEC--CCCEEEEcCcccc
Confidence 444545554 788999985 599999 9999875 3479999999874
No 48
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.09 E-value=3.1e-10 Score=109.72 Aligned_cols=95 Identities=17% Similarity=0.056 Sum_probs=68.1
Q ss_pred ccEEEEcCCchhhhCCccccC-CCCcEEeCHhhHhhccccC----------------CCCCc------------------
Q 040718 15 SQVYFLTHLHSDHTQGLSSAW-ARGPLFCSRLTAKLFPLKF----------------PGLDL------------------ 59 (403)
Q Consensus 15 i~aifLTH~H~DHi~GL~~~~-~~~pIy~s~~T~~lL~~~~----------------~~~~~------------------ 59 (403)
+++||+||.|.||++|+..+. .+.+||+++.+.+.+.... .+.+.
T Consensus 63 i~~Vi~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 142 (317)
T 2zo4_A 63 VKTILLTHHHPDHYGLSGFFEGLGARVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVH 142 (317)
T ss_dssp CCEEEESCCSHHHHTTHHHHHHTTCEEEEEGGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCC
T ss_pred cCEEEEcCCCCcccccHHHHHhCCCEEEEcHHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCC
Confidence 689999999999999998651 1789999998876653210 01111
Q ss_pred --cceEeccCCCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEECCeeEEEECCcCcCC
Q 040718 60 --SLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125 (403)
Q Consensus 60 --~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~ 125 (403)
.....+..++.+.+ ++.+++++.+ ||+|| +++|++ ++.+++|+||..+..
T Consensus 143 ~~~~~~~~~~g~~l~~----------gg~~~~~i~tpGHt~g----~~~~~~--~~~~~lf~GD~~~~~ 195 (317)
T 2zo4_A 143 PPQNPLPLRDGEALEV----------AGKRLRVLWTPGHADG----HAAFYL--EEEGVLLAGDALLEK 195 (317)
T ss_dssp CCSSCEEECTTCEEEE----------TTEEEEEEECCSSSTT----CEEEEE--TTTTEEEEETSCCSS
T ss_pred CCCCceEECCCCEEEe----------CCceEEEEECCCCCcc----cEEEEe--CCCCEEEECCEecCC
Confidence 01233444555544 7889999988 99999 999986 356799999998754
No 49
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.09 E-value=1.7e-10 Score=110.05 Aligned_cols=98 Identities=18% Similarity=0.146 Sum_probs=73.6
Q ss_pred CCeEEEcCCCC------------CccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHhhccccCCCCCccceEeccC
Q 040718 3 KGLISVDRWTE------------GSQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDI 67 (403)
Q Consensus 3 ~~~i~VD~f~~------------~i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~lL~~~~~~~~~~~i~~l~~ 67 (403)
+..++||+... .+++||+||.|.||++|+..+ +++.+||+++.. ++. ....+..
T Consensus 23 ~~~vlID~G~~~~i~~~l~~~g~~i~~IllTH~H~DH~gg~~~l~~~~~~~~v~~~~~~-------~~~----~~~~~~~ 91 (260)
T 1qh5_A 23 KEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDR-------IGA----LTHKITH 91 (260)
T ss_dssp TEEEEESCSSHHHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHHSTTCEEEESCTT-------STT----CSEECCT
T ss_pred CEEEEEcCCCHHHHHHHHHHcCCCccEEEeCCCCccccCCHHHHHHHCCCCEEEECccc-------CCC----CCEEeCC
Confidence 35689999641 367999999999999999875 457899998642 111 1234556
Q ss_pred CCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEE-EE--CCeeEEEECCcCcCC
Q 040718 68 GSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLF-RG--DFGCLLYTGDFRWEA 125 (403)
Q Consensus 68 ~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~-e~--~~~~vlyTGD~r~~~ 125 (403)
++.+.+ +++.|+++.+ ||+|| +++|++ +. ++.+++||||+.+..
T Consensus 92 g~~~~~----------g~~~~~vi~tPGHt~g----~~~~~~~~~~~~~~~~lftGD~l~~~ 139 (260)
T 1qh5_A 92 LSTLQV----------GSLNVKCLATPCHTSG----HICYFVSKPGGSEPPAVFTGDTLFVA 139 (260)
T ss_dssp TCEEEE----------TTEEEEEEECCSSSTT----CEEEEEECSSSSSCCEEEEETTEETT
T ss_pred CCEEEE----------CCEEEEEEECCCCCCC----CEEEEEeccCCCCCCEEEEcCccccC
Confidence 666666 7889999887 99999 999998 33 356899999997754
No 50
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.07 E-value=4.5e-10 Score=107.55 Aligned_cols=105 Identities=15% Similarity=0.077 Sum_probs=76.7
Q ss_pred CCCeEEEcCCCC------------------CccEEEEcCCchhhhCCcccc---C---CCCcEEeCHhhHhhccccCCCC
Q 040718 2 EKGLISVDRWTE------------------GSQVYFLTHLHSDHTQGLSSA---W---ARGPLFCSRLTAKLFPLKFPGL 57 (403)
Q Consensus 2 ~~~~i~VD~f~~------------------~i~aifLTH~H~DHi~GL~~~---~---~~~pIy~s~~T~~lL~~~~~~~ 57 (403)
+++.|+||+... .+++||+||.|.||++|+..+ + ...++|+++.+.... ..+..
T Consensus 40 ~~~~ilID~G~~~~~~~~~~l~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~~~~~v~~~~~~~~~~-~~~~~- 117 (289)
T 4ad9_A 40 GPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQRE-EIIGN- 117 (289)
T ss_dssp SSSEEEECCCSTTCHHHHHHHHHHHHHTTCCEEEEECSCSSHHHHTTHHHHHHHSCCSSCCCEEECCCSSCCC-CCBTT-
T ss_pred CCceEEEeCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCCCcccccHHHHHHhhccCCCceEEecCCCcchh-hhccC-
Confidence 356799999531 478999999999999999875 3 367899986543221 11111
Q ss_pred CccceEeccCCCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEECCeeEEEECCcCcC
Q 040718 58 DLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124 (403)
Q Consensus 58 ~~~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~ 124 (403)
....+..+..++.+.+ ++.+++++.+ ||+|| +++|+++ ..+++||||+-+.
T Consensus 118 ~~~~~~~~~~g~~~~~----------gg~~~~~~~~pGHt~~----~~~~~~~--~~~~lftGD~~~~ 169 (289)
T 4ad9_A 118 GEQQYVYLKDGDVIKT----------EGATLRVLYTPGHTDD----HMALLLE--EENAIFSGDCILG 169 (289)
T ss_dssp TTBCEEECCTTCEEEE----------TTEEEEEEECCSSSTT----CEEEEET--TTTEEEEETSSCS
T ss_pred CCCceEEcCCCCEEEe----------CCeEEEEEECCCCCCC----CEEEEEc--CCCEEEEecccCC
Confidence 1124566777887776 8899999988 99999 9999985 3469999997553
No 51
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.07 E-value=1.6e-10 Score=119.13 Aligned_cols=107 Identities=15% Similarity=0.247 Sum_probs=81.7
Q ss_pred CCeEEEcCCCC-------------CccEEEEcCCchhhhCCcccc--CCCCcEEeCHhhHhhccccCCCCCccceEeccC
Q 040718 3 KGLISVDRWTE-------------GSQVYFLTHLHSDHTQGLSSA--WARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDI 67 (403)
Q Consensus 3 ~~~i~VD~f~~-------------~i~aifLTH~H~DHi~GL~~~--~~~~pIy~s~~T~~lL~~~~~~~~~~~i~~l~~ 67 (403)
+..++||+... .+++||+||.|.||++|+..+ ..+.+||+++.+...+...+ .+ .....+..
T Consensus 48 ~~~vlID~g~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~a~v~~~~~~~~~~~~~~--~~-~~~~~~~~ 124 (466)
T 3r2u_A 48 GEAMIIDPIRDLSSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKLNANIYVSGESDDTLGYKN--MP-NHTHFVQH 124 (466)
T ss_dssp CEEEEESCCSCCHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHHCCEEEEECCSCTTTSCCS--CC-TTCEEECT
T ss_pred CEEEEEcCCCCHHHHHHHHHHCCCeeeEEEECCCChhhhccHHHHHHhhCCeEEECcchhhhhcccc--CC-CCCEEeCC
Confidence 34699999752 378999999999999999875 23789999987665553222 11 13456677
Q ss_pred CCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEEC-----CeeEEEECCcCcCCC
Q 040718 68 GSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGD-----FGCLLYTGDFRWEAS 126 (403)
Q Consensus 68 ~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~-----~~~vlyTGD~r~~~~ 126 (403)
++.+.+ ++++|+++.+ ||+|| +++|+++.. +.+++||||+.+...
T Consensus 125 g~~l~~----------g~~~l~vi~tPGHT~g----~~~~~~~~~~~~~~~~~~lftGD~lf~~~ 175 (466)
T 3r2u_A 125 NDDIYV----------GNIKLKVLHTPGHTPE----SISFLLTDEGAGAQVPMGLFSGDFIFVGD 175 (466)
T ss_dssp TCEEEE----------TTEEEEEEECCSSSTT----CEEEEEECGGGTCCSCCEEEEETTBCSSC
T ss_pred CCEEEE----------CCEEEEEEECCCCCCC----CEEEEEcCCCccCCCceEEEECCcccCCC
Confidence 777776 8899999997 89999 999999863 346999999988654
No 52
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.07 E-value=2.1e-10 Score=110.57 Aligned_cols=105 Identities=20% Similarity=0.207 Sum_probs=74.6
Q ss_pred CCeEEEcCCC------------------CCccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHhhcccc--------
Q 040718 3 KGLISVDRWT------------------EGSQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAKLFPLK-------- 53 (403)
Q Consensus 3 ~~~i~VD~f~------------------~~i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~lL~~~-------- 53 (403)
++.++||+.. ..+++||+||.|.||++|+..+ +++.+||+++.+.+.+...
T Consensus 34 ~~~iLID~G~~~~~~~~~~~l~~~~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~ 113 (303)
T 2vw8_A 34 ASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAWKSESAVRVVER 113 (303)
T ss_dssp TEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGGCTTCEEEEEHHHHHHTTCHHHHHHHHH
T ss_pred CceEEEECCCCCcHHHHHHHHHHHhcCcccceEEEeccCCccccCCHHHHHHhCCCCeEEECHHHHHHHhccchhhHHHH
Confidence 4568899853 1368999999999999999865 4588999999988766431
Q ss_pred --------CCCC------CccceEeccCCCeEEEEeecCCCCCcCc-eEEEEEec-CCCCCCCCceEEEEEEECCeeEEE
Q 040718 54 --------FPGL------DLSLIRVLDIGSWHSISVVSPSSGEKTF-VEVIAIDA-NHCPGILGCSVMLLFRGDFGCLLY 117 (403)
Q Consensus 54 --------~~~~------~~~~i~~l~~~~~~~i~l~~~~~~~~~~-v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~~~vly 117 (403)
+... .......+..++.+.+ ++ .+++++.+ ||++| +++|+++ +.+++|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l----------g~g~~l~~i~~pGHt~g----~~~~~~~--~~~~lf 177 (303)
T 2vw8_A 114 LNRQLLRAEQRLPEACAWDALPVRAVADGEWLEL----------GPRHRLQVIEAHGHSDD----HVVFYDV--RRRRLF 177 (303)
T ss_dssp HHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEE----------ETTEEEEEEECTTSSTT----CEEEEET--TTTEEE
T ss_pred HHHHHHHhhcccccccCCCCCCceEcCCCCEEec----------CCCeEEEEEECCCCCcc----cEEEEEC--CCCEEE
Confidence 1000 0011233444555554 55 88888887 99999 9999885 457999
Q ss_pred ECCcCc
Q 040718 118 TGDFRW 123 (403)
Q Consensus 118 TGD~r~ 123 (403)
+||+-.
T Consensus 178 ~GD~~~ 183 (303)
T 2vw8_A 178 CGDALG 183 (303)
T ss_dssp EETTTC
T ss_pred EcCccC
Confidence 999853
No 53
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.06 E-value=2.4e-10 Score=112.50 Aligned_cols=94 Identities=18% Similarity=0.245 Sum_probs=65.0
Q ss_pred ccEEEEcCCchhhhCCccc----cCCCCcEEeCHhhHhhccccC--CCCCc--------------------cceEeccCC
Q 040718 15 SQVYFLTHLHSDHTQGLSS----AWARGPLFCSRLTAKLFPLKF--PGLDL--------------------SLIRVLDIG 68 (403)
Q Consensus 15 i~aifLTH~H~DHi~GL~~----~~~~~pIy~s~~T~~lL~~~~--~~~~~--------------------~~i~~l~~~ 68 (403)
+++|||||.|.||++|+.. .+.+.+||+++.+.+.+.... ...+. ..+..+..+
T Consensus 140 Id~VilTH~H~DHiggl~~~~~~~fp~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 219 (331)
T 1p9e_A 140 VDEIYITHMHPDHVGGLMVGEQLAFPNAVVRADQKEADFWLSQTNLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGN 219 (331)
T ss_dssp CCEEECSCCCHHHHGGGEETTEESSTTCEEECBHHHHHHHSCHHHHTTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSS
T ss_pred CCEEEeCCcccccCCcccccccccCCCCEEEECHHHHHHHhCchhhccCchhhhhHHHHHHHHHhhhhcccCceEEeCCC
Confidence 6899999999999999984 256899999999988764311 00100 011111111
Q ss_pred CeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEECCeeEEEECCcCcCC
Q 040718 69 SWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125 (403)
Q Consensus 69 ~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~ 125 (403)
.++ ..+ |+++++ ||+|| +++|+++.++++++|+||+.+.+
T Consensus 220 --~~i---------~~g--i~vi~tpGHtpG----~~~~~i~~~~~~vlf~GD~~~~~ 260 (331)
T 1p9e_A 220 --TDL---------VPG--IKALASHGHTPG----HTTYVVESQGQKLALLGDLILVA 260 (331)
T ss_dssp --EEC---------STT--EEEEECTTSSTT----CEEEEEEETTEEEEECTTSCCCH
T ss_pred --CEE---------ccc--EEEEEcCCCChh----CEEEEEEECCcEEEEEECccCcc
Confidence 112 124 555555 99999 99999998889999999998764
No 54
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.06 E-value=2.5e-10 Score=114.86 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=76.8
Q ss_pred CCeEEEcCCC-----------------CCccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHhhccccCCCCCccce
Q 040718 3 KGLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAKLFPLKFPGLDLSLI 62 (403)
Q Consensus 3 ~~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~lL~~~~~~~~~~~i 62 (403)
++.++||+.. ..+++||+||.|.||++|+..+ +++.+||+++.+.+.+...+. .+....
T Consensus 49 ~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~ 127 (414)
T 2q9u_A 49 ECPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQEHLKILYG-MEKATW 127 (414)
T ss_dssp SSCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGGSTTCEEEECHHHHHHHHHHHC-CTTCCE
T ss_pred CCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhcCHHHHHHHCCCCEEEECHHHHHHHHHHhC-CCCCee
Confidence 3468999854 2478999999999999999865 468899999999988865442 221234
Q ss_pred EeccCCCeEEEEeecCCCCCcCceEEEEEec--CCCCCCCCceEEEEEEECCeeEEEECCcCc
Q 040718 63 RVLDIGSWHSISVVSPSSGEKTFVEVIAIDA--NHCPGILGCSVMLLFRGDFGCLLYTGDFRW 123 (403)
Q Consensus 63 ~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A--~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~ 123 (403)
..+..++.+.+ ++.+++++.+ ||++| +++++++ +.+++||||+..
T Consensus 128 ~~~~~g~~~~l----------g~~~~~~~~~p~gHt~~----~~~~~~~--~~~~lf~GD~~~ 174 (414)
T 2q9u_A 128 LIVDDKYTLKI----------GKRTLKFIPVPLLHWPD----STFTYCP--EDKILFSNDGFG 174 (414)
T ss_dssp EECCTTCCEEC----------SSCEEEEEECTTSSSTT----CEEEEET--TTTEEEEETTTC
T ss_pred EEeCCCCEEEE----------CCeEEEEEeCCCCCCCC----ceEEEEC--CCeEEEEccccc
Confidence 55666666655 6777777766 69999 8876653 457999999654
No 55
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.04 E-value=3.9e-10 Score=107.42 Aligned_cols=95 Identities=20% Similarity=0.247 Sum_probs=72.7
Q ss_pred CCeEEEcCCCC------------CccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHhhccccCCCCCccceEeccC
Q 040718 3 KGLISVDRWTE------------GSQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDI 67 (403)
Q Consensus 3 ~~~i~VD~f~~------------~i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~lL~~~~~~~~~~~i~~l~~ 67 (403)
+..++||+... .+++||+||.|.||++|+..+ +++.+||+++.+. +++ ....+..
T Consensus 29 ~~~vlID~G~~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~------~~~----~~~~~~~ 98 (258)
T 2qed_A 29 GRCVIVDPGEAAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHFPQMTVYGPAETQ------DKG----ATHLVGD 98 (258)
T ss_dssp SEEEEECCSCHHHHHHHHHHHTCEEEEEECCSCCHHHHTTHHHHHHHCTTCEEEECGGGG------GGT----CSEECCT
T ss_pred CcEEEEeCCCcHHHHHHHHHcCCCCCEEEeCCCCccccCCHHHHHHHCCCCEEEeccccc------CCC----CcEEeCC
Confidence 34689998641 478999999999999999875 3458999997653 111 1245566
Q ss_pred CCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEECCeeEEEECCcCcCC
Q 040718 68 GSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125 (403)
Q Consensus 68 ~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~ 125 (403)
++.+.+ ++..++++.+ ||+|| +++|+ ..+++||||+.+..
T Consensus 99 g~~~~~----------g~~~~~vi~tPGHt~g----~~~~~----~~~~lftGD~l~~~ 139 (258)
T 2qed_A 99 GDTIRV----------LGEKFTLFATPGHTLG----HVCYF----SRPYLFCGDTLFSG 139 (258)
T ss_dssp TCEEEE----------TTEEEEEEECCSSSTT----CEEEE----ETTEEEEETTEETT
T ss_pred CCEEEE----------CCcEEEEEECCCCCCC----CeEEE----cCCEEEECCCCCCC
Confidence 777766 7889999987 99999 99988 24699999998754
No 56
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.04 E-value=3.3e-10 Score=107.74 Aligned_cols=107 Identities=21% Similarity=0.162 Sum_probs=73.9
Q ss_pred CCeEEEcCCC-----------------CCccEEEEcCCchhhhCCcccc-CCCCcEEeCHhhHhhccccCCCCCccceEe
Q 040718 3 KGLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSA-WARGPLFCSRLTAKLFPLKFPGLDLSLIRV 64 (403)
Q Consensus 3 ~~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~-~~~~pIy~s~~T~~lL~~~~~~~~~~~i~~ 64 (403)
++.++||+.. ..+++||+||.|.||++|+..+ ..+.+||+++.+.+.+.......+...+..
T Consensus 77 ~~~iLID~G~~~~~~~~l~~~l~~~~g~~i~~VilTH~H~DH~gg~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~ 156 (265)
T 2y8b_A 77 DELLLIDTAWGAKNTVALLAEIEKQIGLPVTRSISTHFHDDRVGGVDVLRAAGVATYTSPLTRQLAEAAGNEVPAHSLKA 156 (265)
T ss_dssp TEEEEESCCSSHHHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHHHTTCEEEECHHHHHHHHHTTCCCCSEECSS
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCChhhcCCHHHHhhCCCeEEECHHHHHHHHhcccccccccccc
Confidence 4678999863 1478999999999999999864 247899999999988864321111101111
Q ss_pred c-cCCCeEEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCeeEEEECCcCcCC
Q 040718 65 L-DIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125 (403)
Q Consensus 65 l-~~~~~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~ 125 (403)
+ ..++.+.+ +++++.....||+|| +++|+++ ..+++|+||+.+..
T Consensus 157 ~~~~~~~~~~----------g~~~v~~~~pGHt~g----~~~~~~~--~~~~lf~GD~~~~~ 202 (265)
T 2y8b_A 157 LSSSGDVVRF----------GPVEVFYPGAAHSGD----NLVVYVP--AVRVLFGGCAVHEA 202 (265)
T ss_dssp CSSTTEEEEE----------TTEEEEECCSSSSTT----CCEEEET--TTTEEEEETTSCCT
T ss_pred cCCCCcEEee----------cCEEEEecCCCCCCC----CEEEEec--CCCEEEEccccccC
Confidence 1 22333322 677776555699999 9999885 35799999988764
No 57
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.04 E-value=2.6e-10 Score=103.96 Aligned_cols=102 Identities=24% Similarity=0.389 Sum_probs=69.2
Q ss_pred CCeEEEcCCCC-------------CccEEEEcCCchhhhCCccccC--CCCcEEeCHhhHhhcccc------CCCCCcc-
Q 040718 3 KGLISVDRWTE-------------GSQVYFLTHLHSDHTQGLSSAW--ARGPLFCSRLTAKLFPLK------FPGLDLS- 60 (403)
Q Consensus 3 ~~~i~VD~f~~-------------~i~aifLTH~H~DHi~GL~~~~--~~~pIy~s~~T~~lL~~~------~~~~~~~- 60 (403)
++.++||+... .+++||+||+|.||++|+..+. ++.+||+++.+.+.+... + +.+..
T Consensus 22 ~~~iliD~G~~~~~l~~~l~~~g~~i~~vilTH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~-g~~~~~ 100 (207)
T 2zwr_A 22 EGPVLIDPGDEPEKLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVEALDLPVYLHPLDLPLYEGADLAARAW-GLAIPK 100 (207)
T ss_dssp TEEEEECCCSCHHHHHHHHHHHTCCCSCEECSCCCGGGTTTHHHHHHHHCCCEEECGGGHHHHHTHHHHHHHT-TCCCCC
T ss_pred CcEEEEeCCCCHHHHHHHHHHcCCcccEEEECCCChHHHccHHHHHHHhCCcEEECHHHHHHHhCchhhhhhc-CCCCCc
Confidence 45789999641 4789999999999999998752 378999999998887532 1 11100
Q ss_pred ---ceEeccCCCeEEEEeecCCCCCcCceEEEEEec-CCCCCCCCceEEEEEEECCeeEEEECCcCcCC
Q 040718 61 ---LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDA-NHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125 (403)
Q Consensus 61 ---~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~ 125 (403)
....+..++. + . .++++.+ ||+|| +++|+++ +.+++|+||+.+..
T Consensus 101 ~~~~~~~~~~g~~--i----------~--~~~~~~~pGHt~g----~~~~~~~--~~~~lf~GD~~~~~ 149 (207)
T 2zwr_A 101 PPLPVRPLEEGMR--L----------F--GFQVLHLPGHSPG----HVAFYDP--EGAQVFSGDLLFRG 149 (207)
T ss_dssp CCSCCEECCTTCE--E----------T--TEEEEECCSSSTT----CEEEEET--TTTEEEEETSEETT
T ss_pred CCCCceEeCCCCE--E----------E--EEEEEeCCCCCCC----cEEEEEC--CCCEEEEecccCCC
Confidence 0111111211 1 1 3455554 89999 9999985 56799999997653
No 58
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.04 E-value=3.6e-10 Score=104.31 Aligned_cols=103 Identities=19% Similarity=0.173 Sum_probs=74.9
Q ss_pred CCeEEEcCCC-----------------CCccEEEEcCCchhhhCCccccC-CCCcEEeCHhhHhhccccCCCCCccceEe
Q 040718 3 KGLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSAW-ARGPLFCSRLTAKLFPLKFPGLDLSLIRV 64 (403)
Q Consensus 3 ~~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~~-~~~pIy~s~~T~~lL~~~~~~~~~~~i~~ 64 (403)
++.++||+.. ..+++||+||.|.||++|+..+. .+.+||+++.+.+++... +++. .+..
T Consensus 50 ~~~iliD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~--~~~~-~~~~ 126 (227)
T 1mqo_A 50 KGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKERGIKAHSTALTAELAKKN--GYEE-PLGD 126 (227)
T ss_dssp TEEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHHTCEEECBHHHHHHHHHT--TCCC-CCCC
T ss_pred CeEEEEECCCChHHHHHHHHHHHHhcCCCceEEEeCCCCchhccchHHHhhCCcEEEeccchHHHHHhc--CCCC-Cccc
Confidence 4568999853 24689999999999999998652 268999999998877532 2211 1223
Q ss_pred ccCCCeEEEEeecCCCCCcCceEEEEE-e-cCCCCCCCCceEEEEEEECCeeEEEECCcCcC
Q 040718 65 LDIGSWHSISVVSPSSGEKTFVEVIAI-D-ANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124 (403)
Q Consensus 65 l~~~~~~~i~l~~~~~~~~~~v~Vt~~-~-A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~ 124 (403)
+..++.+.+ ++++|+++ + .||++| +++|+++ +.+++|+||+.+.
T Consensus 127 ~~~~~~~~~----------g~~~i~~~~~~pgHt~g----~~~~~~~--~~~~lf~GD~~~~ 172 (227)
T 1mqo_A 127 LQTVTNLKF----------GNMKVETFYPGKGHTED----NIVVWLP--QYNILVGGCLVKS 172 (227)
T ss_dssp BCSEEEEEE----------TTEEEEEECCCCSSSSS----CCEEEET--TTTEEEEETTSCC
T ss_pred cCCCCeeeE----------CCEEEEEEecCCCCCCC----CEEEEEC--CCCEEEEeeeeec
Confidence 334444444 78899987 3 599999 9999884 4579999998764
No 59
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.03 E-value=4.9e-10 Score=104.28 Aligned_cols=105 Identities=23% Similarity=0.153 Sum_probs=72.4
Q ss_pred CeEEEcCCCC-----------------CccEEEEcCCchhhhCCccccC-CCCcEEeCHhhHhhcccc-----------C
Q 040718 4 GLISVDRWTE-----------------GSQVYFLTHLHSDHTQGLSSAW-ARGPLFCSRLTAKLFPLK-----------F 54 (403)
Q Consensus 4 ~~i~VD~f~~-----------------~i~aifLTH~H~DHi~GL~~~~-~~~pIy~s~~T~~lL~~~-----------~ 54 (403)
+.++||+... ...+||+||+|.||++|+..+. .+.+||+++.+.+.+... +
T Consensus 41 ~~iLiD~G~~~~~~~~l~~~l~~~~~~~~~~vi~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (246)
T 2fhx_A 41 TVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIYKKMGAETWSSDLTKQLRLEENKKDRIKAAEFY 120 (246)
T ss_dssp EEEEESCCSSHHHHHHHHHHHHHHHCCSEEEEECCSSSHHHHTTHHHHHHTTCEEEEEHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHhcCCCcEEEEeCCCCccccChHHHHhhcCCEEEEcHHHHHHHHhcchhhhHHHHhhh
Confidence 4689998531 1237999999999999998652 378999999988776421 1
Q ss_pred C------------CCCccceEeccCCCeEEEEeecCCCCCcCceEEEEEe--cCCCCCCCCceEEEEEEECCeeEEEECC
Q 040718 55 P------------GLDLSLIRVLDIGSWHSISVVSPSSGEKTFVEVIAID--ANHCPGILGCSVMLLFRGDFGCLLYTGD 120 (403)
Q Consensus 55 ~------------~~~~~~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~--A~H~pG~~~~Sv~fl~e~~~~~vlyTGD 120 (403)
. .++...+..+..++.+.+ ++.+++++. .||+|| +++|+++ +.+++|+||
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~----------g~~~i~~~~~~pGHt~g----~~~~~~~--~~~~lf~GD 184 (246)
T 2fhx_A 121 KNEDLKRRILSSHPVPADNVFDLKQGKVFSF----------SNELVEVSFPGPAHSPD----NVVVYFP--KKKLLFGGC 184 (246)
T ss_dssp CCHHHHHHHHHTCCCCCSEEECTTTCEEEEE----------TTEEEEEECCCCSSSTT----CCEEEET--TTTEEEEET
T ss_pred ccccchhhhcccccCCCCceeecCCCCEEEE----------CCEEEEEEeCCCCCCCC----CEEEEEc--CCCEEEECC
Confidence 0 011111223344444444 788899984 499999 9998875 457999999
Q ss_pred cCcC
Q 040718 121 FRWE 124 (403)
Q Consensus 121 ~r~~ 124 (403)
+.+.
T Consensus 185 ~~~~ 188 (246)
T 2fhx_A 185 MIKP 188 (246)
T ss_dssp TCCS
T ss_pred Eecc
Confidence 8764
No 60
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.01 E-value=2e-10 Score=106.39 Aligned_cols=102 Identities=19% Similarity=0.157 Sum_probs=71.6
Q ss_pred CCeEEEcCCCC----------------CccEEEEcCCchhhhCCccccC-CCCcEEeCHhhHhhccccCCCCCccceEec
Q 040718 3 KGLISVDRWTE----------------GSQVYFLTHLHSDHTQGLSSAW-ARGPLFCSRLTAKLFPLKFPGLDLSLIRVL 65 (403)
Q Consensus 3 ~~~i~VD~f~~----------------~i~aifLTH~H~DHi~GL~~~~-~~~pIy~s~~T~~lL~~~~~~~~~~~i~~l 65 (403)
++.++||+... .+++||+||.|.||++|+..+. .+.+||+++.+.+++.......+. ..+
T Consensus 42 ~~~iliD~g~~~~~~~~~~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~ 118 (228)
T 1jjt_A 42 AEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNSRSIPTYASELTNELLKKDGKVQAT---NSF 118 (228)
T ss_dssp TEEEEESCCSSHHHHHHHHHHHHTTTCEEEEEECSSSSHHHHTTHHHHHHTTCCEEEEHHHHHHHHHTTCCCCS---EEE
T ss_pred CcEEEEeCCCChhhHHHHHHHHHHcCCCeeEEEeCCCChhhhccHHHHHhCCCEEEEChHHHHHHHhcCCcCcc---ccc
Confidence 45789999631 4689999999999999998652 378999999999888543211111 112
Q ss_pred cCCCeEEEEeecCCCCCcCceEEEEE-e-cCCCCCCCCceEEEEEEECCeeEEEECCcCcC
Q 040718 66 DIGSWHSISVVSPSSGEKTFVEVIAI-D-ANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124 (403)
Q Consensus 66 ~~~~~~~i~l~~~~~~~~~~v~Vt~~-~-A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~ 124 (403)
+ +..+.+ ++..|+++ . .||+|| +++|+++ ..+++|+||+.+.
T Consensus 119 ~-g~~~~l----------~~~~i~~~~~~pGHt~g----~~~~~~~--~~~~lf~GD~~~~ 162 (228)
T 1jjt_A 119 S-GVNYWL----------VKNKIEVFYPGPGHTPD----NVVVWLP--ERKILFGGCFIKP 162 (228)
T ss_dssp C-SSCCEE----------ETTTEEEECCCCSSSTT----CCEEEET--TTTEEEEETTCCT
T ss_pred c-CcceEe----------cCceEEEEecCCCCCCC----cEEEEEC--CCcEEEEeccccc
Confidence 1 333334 45566765 4 499999 9999875 3579999998763
No 61
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=98.97 E-value=8.3e-10 Score=108.01 Aligned_cols=87 Identities=23% Similarity=0.263 Sum_probs=68.3
Q ss_pred ccEEEEcCCchhhhCCcccc---CC------CCcEEeCHhhHhhccccCCCCCccceEeccCCCeEEEEeecCCCCCcCc
Q 040718 15 SQVYFLTHLHSDHTQGLSSA---WA------RGPLFCSRLTAKLFPLKFPGLDLSLIRVLDIGSWHSISVVSPSSGEKTF 85 (403)
Q Consensus 15 i~aifLTH~H~DHi~GL~~~---~~------~~pIy~s~~T~~lL~~~~~~~~~~~i~~l~~~~~~~i~l~~~~~~~~~~ 85 (403)
+++||+||.|.||++|+..+ ++ +.+||+++.+. ++. ....+..++.+.+ ++
T Consensus 85 i~~IllTH~H~DH~gg~~~l~~~~~~~~~~~~~~v~~~~~~~------~~~----~~~~l~~g~~l~l----------g~ 144 (311)
T 2p18_A 85 FSTILSTHKHWDHSGGNAKLKAELEAMNSTVPVVVVGGANDS------IPA----VTKPVREGDRVQV----------GD 144 (311)
T ss_dssp EEEEEESSSSHHHHTTHHHHHHHHHSCC--CCCEEEEEGGGT------CTT----CSEEECTTCEEEE----------TT
T ss_pred ccEEEeCCCCccccCCHHHHHHhhhhcccCCCCEEEEechhc------CCC----CceEeCCCCEEEE----------CC
Confidence 57899999999999999865 22 68999987652 221 2245566777766 78
Q ss_pred eEEEEEec-CCCCCCCCceEEEEEEECC---e-eEEEECCcCcCC
Q 040718 86 VEVIAIDA-NHCPGILGCSVMLLFRGDF---G-CLLYTGDFRWEA 125 (403)
Q Consensus 86 v~Vt~~~A-~H~pG~~~~Sv~fl~e~~~---~-~vlyTGD~r~~~ 125 (403)
.+|+++.+ ||++| +++|+++.++ . +++||||+.+..
T Consensus 145 ~~l~vi~tPGHT~g----~i~~~~~~~~~~~~~~~lftGD~l~~~ 185 (311)
T 2p18_A 145 LSVEVIDAPCHTRG----HVLYKVQHPQHPNDGVALFTGDTMFIA 185 (311)
T ss_dssp EEEEEEECCSSSTT----CEEEEEECTTCGGGCEEEEEETTEETT
T ss_pred eEEEEEECCCCCcc----cEEEEEecCCcCCcCCEEEEcCccccC
Confidence 89999988 99999 9999998666 5 899999997754
No 62
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=98.91 E-value=1.4e-09 Score=99.56 Aligned_cols=106 Identities=19% Similarity=0.181 Sum_probs=68.4
Q ss_pred CCCeEEEcCCC-----------------CCccEEEEcCCchhhhCCccccC-CCCcEEeCHhhHhhccccC---------
Q 040718 2 EKGLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSAW-ARGPLFCSRLTAKLFPLKF--------- 54 (403)
Q Consensus 2 ~~~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~~-~~~pIy~s~~T~~lL~~~~--------- 54 (403)
+++.|+||+.. ..+++||+||.|.||++|+..+. ++.+||+++.+.+.+...+
T Consensus 31 ~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 110 (227)
T 3iog_A 31 AKGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKSIGAKVVSTRQTRDLMKSDWAEIVAFTRK 110 (227)
T ss_dssp SSCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHHTTCEEEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCChHHHHHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhhCCCeEEECHHHHHHHHHhhHHHHHHhhc
Confidence 45689999863 24689999999999999998742 5789999999988775321
Q ss_pred --CCCCc-cceE-eccCCCeEEEEeecCCCCCcCceEEEEEe--cCCCCCCCCceEEEEEEECCeeEEEECCcCcC
Q 040718 55 --PGLDL-SLIR-VLDIGSWHSISVVSPSSGEKTFVEVIAID--ANHCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124 (403)
Q Consensus 55 --~~~~~-~~i~-~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~--A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~ 124 (403)
+.++. .... ....+..+.+ ++..++++. .||+|| +++|+++ ..+++| ||..+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l----------~~~~~~~~~~~pGHt~g----~~~~~~~--~~~~lf-gd~l~~ 169 (227)
T 3iog_A 111 GLPEYPDLPLVLPNVVHDGDFTL----------QEGKVRAFYAGPAHTPD----GIFVYFP--DEQVLY-GGCILK 169 (227)
T ss_dssp HCTTSCCCCCCCCSEEESSCEEE----------TTTTEEEECCCCSSSSS----CCEEEET--TTTEEE-CGGGSC
T ss_pred CCCCCCCccccCCCEeecCeEEE----------cCcEEEEEecCCCCCCC----cEEEEec--CCCEEE-cccccc
Confidence 11110 0000 0001222333 333455555 699999 9998885 346888 876554
No 63
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=98.89 E-value=4.4e-09 Score=106.96 Aligned_cols=101 Identities=14% Similarity=0.206 Sum_probs=79.3
Q ss_pred CCCeEEEcCCC-----------------CCccEEEEcCCchhhhCCcccc----CCCCcEEeCHhhHhhccccCCCCCcc
Q 040718 2 EKGLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSA----WARGPLFCSRLTAKLFPLKFPGLDLS 60 (403)
Q Consensus 2 ~~~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~----~~~~pIy~s~~T~~lL~~~~~~~~~~ 60 (403)
++..++||+.. ..+++|++||.|.||++|++.+ .++.+|||++.+..+|...++ . .
T Consensus 60 ~~~~vLIDtg~~~~~~~~l~~l~~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~~~~~v~~s~~~~~~l~~~~~-~--~ 136 (410)
T 4dik_A 60 NGANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDASGSLPATLKTIGHDVEIIASNFGKRLLEGFYG-I--K 136 (410)
T ss_dssp SSCEEEECCCCGGGHHHHHHHHTTTSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHHHHHHHHHHC-C--C
T ss_pred CCeEEEEeCCCcchHHHHHHHHHHhcCcccCCEEEeCcCCcchhhhHHHHHHHcCCCCEEEeCHHHHHHHHhhcC-c--c
Confidence 45678999853 1478999999999999999864 357899999999999876553 2 2
Q ss_pred ceEeccCCCeEEEEeecCCCCCcCceEEEEEec-C-CCCCCCCceEEEEEEECCeeEEEECCcCc
Q 040718 61 LIRVLDIGSWHSISVVSPSSGEKTFVEVIAIDA-N-HCPGILGCSVMLLFRGDFGCLLYTGDFRW 123 (403)
Q Consensus 61 ~i~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A-~-H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~ 123 (403)
.+..+..|+.+.+ |+.+++++.+ + |.|| +++++. ..+|||||+..
T Consensus 137 ~~~~v~dGd~l~l----------G~~~L~~i~tPg~H~p~----~~~~y~----~~iLFsgD~fg 183 (410)
T 4dik_A 137 DVTVVKDGEEREI----------GGKKFKFVMTPWLHWPD----TMVTYL----DGILFSCDVGG 183 (410)
T ss_dssp CEEECCTTCEEEE----------TTEEEEEEECTTSSSTT----CEEEEE----TTEEEEETTTC
T ss_pred ceeEecCCCEEee----------cceEEEEecCCCCCCCC----CeeEEe----CCceEcccccc
Confidence 4567777887777 8889999988 6 9999 877663 25999999754
No 64
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=98.87 E-value=1.6e-09 Score=99.58 Aligned_cols=109 Identities=11% Similarity=0.107 Sum_probs=71.1
Q ss_pred CCCeEEEcCCC-----------------CCccEEEEcCCchhhhCCccccC-CCCcEEeCHhhHhhccccC---------
Q 040718 2 EKGLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSAW-ARGPLFCSRLTAKLFPLKF--------- 54 (403)
Q Consensus 2 ~~~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~~-~~~pIy~s~~T~~lL~~~~--------- 54 (403)
+++.|+||+.. ..+++||+||.|.||++|+..+. .+.+||+++.+++++....
T Consensus 34 ~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 113 (233)
T 3q6v_A 34 TDGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWKTLGAKIVATQMTYDLQKSQWGSIVNFTRQ 113 (233)
T ss_dssp SSCEEEESCCSSHHHHHHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHHHTTCEEEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCHHHHHHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHhhCCCEEEEcHHHHHHHHhhhHHHHHHHhc
Confidence 45679999742 24689999999999999998752 5789999999988875421
Q ss_pred --CCCCc-cce-EeccCCCeEEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCeeEEEECCcCcCC
Q 040718 55 --PGLDL-SLI-RVLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125 (403)
Q Consensus 55 --~~~~~-~~i-~~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~ 125 (403)
..++. ... ....+.....+ ..++++|.....||+|| +++|+++ ..+++| ||..+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~~v~~~~pGHt~g----~~~~~~~--~~~~lf-gD~~~~~ 173 (233)
T 3q6v_A 114 GNNKYPNLEKSLPDTVFPGDFNL--------QNGSIRAMYLGEAHTKD----GIFVYFP--AERVLY-GNCILKE 173 (233)
T ss_dssp HSTTCCCCCCCCCSEEESSCEEE--------TTTTEEEECCCCSSSSS----CCEEEET--TTTEEE-CTTTSCS
T ss_pred cccccccccccCCCEEeCCCeEE--------cCceEEEEECCCCCCcC----cEEEEec--cCCEEE-Cceeccc
Confidence 01110 000 00111222333 12456665555799999 9888874 346888 9987654
No 65
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.81 E-value=2.7e-09 Score=101.76 Aligned_cols=114 Identities=13% Similarity=0.125 Sum_probs=72.3
Q ss_pred CCCeEEEcCCC-----------------CCccEEEEcCCchhhhCCcccc-CCCCcEEeCHhhHhhccccCCCCCccceE
Q 040718 2 EKGLISVDRWT-----------------EGSQVYFLTHLHSDHTQGLSSA-WARGPLFCSRLTAKLFPLKFPGLDLSLIR 63 (403)
Q Consensus 2 ~~~~i~VD~f~-----------------~~i~aifLTH~H~DHi~GL~~~-~~~~pIy~s~~T~~lL~~~~~~~~~~~i~ 63 (403)
+++.++||+-. ..+++|++||.|.||++|+..+ -.+.++|+++.+.+++........ ....
T Consensus 83 ~~~~ilIDtg~~~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~ 161 (270)
T 4eyb_A 83 GGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEGMVAA-QHSL 161 (270)
T ss_dssp TTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHTTCEEEEEHHHHHHGGGGTCCCC-SEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHHCCCeEEECHHHHHHHHhcCcccc-cccc
Confidence 35678999742 2478999999999999999875 257899999999998865321111 1111
Q ss_pred eccCCCeEEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCeeEEEECCcCcCCC
Q 040718 64 VLDIGSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEAS 126 (403)
Q Consensus 64 ~l~~~~~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~~ 126 (403)
....... + ........+++.+.....||+|| ++++++. ..++||+||+-+...
T Consensus 162 ~~~~~~~--~--~~~~~~~~g~~~~~~~~pgHT~g----~~~~~~~--~~~vLfsGD~l~~~~ 214 (270)
T 4eyb_A 162 TFAANGW--V--EPATAPNFGPLKVFYPGPGHTSD----NITVGID--GTDIAFGGCLIKDSK 214 (270)
T ss_dssp CBCTTSB--B--CGGGSTTCTTEEEECCCSSSSSS----CCEEEET--TSSEEECTTTCCCTT
T ss_pred CCCCcee--e--cCceeeecCceeEEecccccCCC----CEEEEec--CCcEEEEeCeecCCC
Confidence 1111110 0 00011122455554455799999 8887775 356999999877543
No 66
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=98.76 E-value=2.1e-08 Score=104.86 Aligned_cols=119 Identities=11% Similarity=0.116 Sum_probs=75.2
Q ss_pred ccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHhhccccCCCC-------------CccceE----eccCCCeEEEE
Q 040718 15 SQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAKLFPLKFPGL-------------DLSLIR----VLDIGSWHSIS 74 (403)
Q Consensus 15 i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~lL~~~~~~~-------------~~~~i~----~l~~~~~~~i~ 74 (403)
+++|||||.|.||++|++.+ +...+||+++.+...+....... ....+. .+..++.+.+
T Consensus 78 id~vilTH~H~DHiggl~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~- 156 (547)
T 2bib_A 78 LDFILVTHTHSDHIGNVDELLSTYPVDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQF- 156 (547)
T ss_dssp BSCEECCCSCHHHHTTHHHHHHHSCBSEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEE-
T ss_pred ccEEEEcCCCccccCCHHHHHHhCCccEEEECcccccccCChHHHHhHHHHHHHHHHHHHHhCCeEEEeecCCCceEec-
Confidence 78999999999999999875 34446999887665543110000 000111 1234555655
Q ss_pred eecCCCCCcCceEEEEEec---CCCCC-------CCCceEEEEEEECCeeEEEECCcCcCCCchhhhccchhhhhhccCC
Q 040718 75 VVSPSSGEKTFVEVIAIDA---NHCPG-------ILGCSVMLLFRGDFGCLLYTGDFRWEASNERAEIGRNTLVKALKDD 144 (403)
Q Consensus 75 l~~~~~~~~~~v~Vt~~~A---~H~pG-------~~~~Sv~fl~e~~~~~vlyTGD~r~~~~~~~~~~~~~~ll~~l~~~ 144 (403)
++++|++++. .|.++ .+..|++|+++.++.++|||||+......+. .+...+ .
T Consensus 157 ---------g~~~i~~l~~~~~~h~~~~~~~~~~~n~~S~vl~i~~~~~~iLftGD~~~~~~~e~------~l~~~~--~ 219 (547)
T 2bib_A 157 ---------GDMDIQLYNYENETDSSGELKKIWDDNSNSLISVVKVNGKKIYLGGDLDNVHGAED------KYGPLI--G 219 (547)
T ss_dssp ---------TTEEEEEESCSCCBCTTSCBCCBSSGGGGCCEEEEEETTEEEEECTTCCSTTSHHH------HHHHHH--C
T ss_pred ---------CCeeEEEecCccccCccccccccCCCCCCcEEEEEEECCEEEEecCCccchhhhhh------hhcccc--c
Confidence 7899999973 34321 1234999999999999999999987643211 111112 4
Q ss_pred CccEEEE
Q 040718 145 VVDILYL 151 (403)
Q Consensus 145 ~~DvLil 151 (403)
++|+|++
T Consensus 220 ~~DvLkv 226 (547)
T 2bib_A 220 KVDLMKF 226 (547)
T ss_dssp CCSEEEC
T ss_pred ceeEEEe
Confidence 6888876
No 67
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=98.63 E-value=1.3e-07 Score=101.52 Aligned_cols=108 Identities=15% Similarity=0.136 Sum_probs=71.7
Q ss_pred CCCeEEEcCCC------------------CCccEEEEcCCchhhhCCccccC-------CCCcEEeCHhhHhhccc----
Q 040718 2 EKGLISVDRWT------------------EGSQVYFLTHLHSDHTQGLSSAW-------ARGPLFCSRLTAKLFPL---- 52 (403)
Q Consensus 2 ~~~~i~VD~f~------------------~~i~aifLTH~H~DHi~GL~~~~-------~~~pIy~s~~T~~lL~~---- 52 (403)
+++.|+||+-. ..+++|++||.|.||++|+..+. ++.+||+++.+.+.+..
T Consensus 131 ~~g~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~~~~~~~~~~e~~~ 210 (658)
T 2cfu_A 131 DSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFMEAAIKENVL 210 (658)
T ss_dssp SSSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEETTHHHHHC---CT
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhccCCCCEEEEchhHHHHHhhhhhh
Confidence 45679999843 24679999999999999998652 47899999887654321
Q ss_pred -----------cCCC-CCcc----------------ce------Eec-cCCCeEEEEeecCCCCCcCceEEEEEec-CC-
Q 040718 53 -----------KFPG-LDLS----------------LI------RVL-DIGSWHSISVVSPSSGEKTFVEVIAIDA-NH- 95 (403)
Q Consensus 53 -----------~~~~-~~~~----------------~i------~~l-~~~~~~~i~l~~~~~~~~~~v~Vt~~~A-~H- 95 (403)
.++. ++.. .+ ..+ ..++.+.+ +|.+++++.+ ||
T Consensus 211 ~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~~~~~p~~~~~~dG~~l~l----------gg~~l~vi~tPGHh 280 (658)
T 2cfu_A 211 AGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVL----------DGVPFTFQNTPGTE 280 (658)
T ss_dssp THHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEECTTEEEEEE----------TTEEEEEEECTTSS
T ss_pred hhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCccCCCCcEEEecCceEEEE----------CCEEEEEEeCCCCC
Confidence 1110 1100 00 011 11222222 7888999887 88
Q ss_pred CCCCCCceEEEEEEECCeeEEEECCcCcCC
Q 040718 96 CPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125 (403)
Q Consensus 96 ~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~ 125 (403)
+|| +++|+++ ..++||+||..+..
T Consensus 281 Tpg----~i~~~~p--~~~vLftGD~v~~~ 304 (658)
T 2cfu_A 281 SPA----EMNIWLP--RQKALLMAENVVGT 304 (658)
T ss_dssp SSS----BEEEEET--TTTEEECTTTSCSS
T ss_pred CCC----cEEEEEC--CCCEEEEecccccc
Confidence 999 9999885 35799999987653
No 68
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=98.60 E-value=5.6e-08 Score=88.28 Aligned_cols=97 Identities=23% Similarity=0.258 Sum_probs=70.0
Q ss_pred CCCeEEEcCCC------------CCccEEEEcCCchhhhCCcccc--CCCCcEEeCHhhHhhccccCCCCCccceEeccC
Q 040718 2 EKGLISVDRWT------------EGSQVYFLTHLHSDHTQGLSSA--WARGPLFCSRLTAKLFPLKFPGLDLSLIRVLDI 67 (403)
Q Consensus 2 ~~~~i~VD~f~------------~~i~aifLTH~H~DHi~GL~~~--~~~~pIy~s~~T~~lL~~~~~~~~~~~i~~l~~ 67 (403)
+++.++||+.. ..+++||+||. ||++|+..+ .++.+||+++.+.+.+... ....+..
T Consensus 32 ~~~~iliD~g~~~~~~~~~l~~~g~i~~ii~TH~--DH~gg~~~~~~~~~a~v~~~~~~~~~~~~~-------~~~~~~~ 102 (201)
T 2p97_A 32 PEGNILIDPVALSNHDWKHLESLGGVVWIVLTNS--DHVRSAKEIADQTYTKIAGPVAEKENFPIY-------CDRWLSD 102 (201)
T ss_dssp TTCCEEESCCCCCHHHHHHHHHTTCCSEEECSSG--GGCTTHHHHHHHSCCEEEEEGGGTTSCSSC-------CSEEECT
T ss_pred CCeeEEEECCCCcHHHHHHHHhcCCCCEEEECCc--hhhhhHHHHHHhcCCEEEEcHhHhhhhccc-------CceecCC
Confidence 35679999973 15789999999 999999875 2468999999887665321 0122222
Q ss_pred CCeEEEEeecCCCCCcCceEEEEEecCCCCCCCCceEEEEEEECCeeEEEECCcCcCC
Q 040718 68 GSWHSISVVSPSSGEKTFVEVIAIDANHCPGILGCSVMLLFRGDFGCLLYTGDFRWEA 125 (403)
Q Consensus 68 ~~~~~i~l~~~~~~~~~~v~Vt~~~A~H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~~ 125 (403)
++. + ..++++...++||+|| +++|+++ + +++|+||+.+..
T Consensus 103 g~~--~---------~~~~~~~~~p~gHt~g----~~~~~~~--~-~~lf~GD~~~~~ 142 (201)
T 2p97_A 103 GDE--L---------VPGLKVMELQGSKTPG----ELALLLE--E-TTLITGDLVRAY 142 (201)
T ss_dssp TCB--S---------STTEEEEEECSSSSTT----EEEEEET--T-TEEEECSSEEBS
T ss_pred CCE--E---------cceEEEEECCCCCCCC----cEEEEEc--C-CEEEECcccccc
Confidence 321 1 1367777778899999 9999886 3 799999988764
No 69
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=97.44 E-value=2.7e-07 Score=99.20 Aligned_cols=103 Identities=12% Similarity=-0.014 Sum_probs=60.6
Q ss_pred ccEEEEcCCchhhhCCccccC-------CCCcEEeCHhhHhhc--cc-------------cCC-CCCcc---ce------
Q 040718 15 SQVYFLTHLHSDHTQGLSSAW-------ARGPLFCSRLTAKLF--PL-------------KFP-GLDLS---LI------ 62 (403)
Q Consensus 15 i~aifLTH~H~DHi~GL~~~~-------~~~pIy~s~~T~~lL--~~-------------~~~-~~~~~---~i------ 62 (403)
+++||+||+|.||++|+..+. ++.+||+++.+.+.+ .. .++ .++.. .+
T Consensus 172 I~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~~~~~e~~~~e~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~ 251 (668)
T 2yhe_A 172 IVAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAPSGFMEHAVSENILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFK 251 (668)
Confidence 578999999999999998752 467999998863211 10 010 01100 00
Q ss_pred -----EeccCCCeEEEEe-ecCCCCCcCceEEEEEec-C-CCCCCCCceEEEEEEECCeeEEEECCcCcC
Q 040718 63 -----RVLDIGSWHSISV-VSPSSGEKTFVEVIAIDA-N-HCPGILGCSVMLLFRGDFGCLLYTGDFRWE 124 (403)
Q Consensus 63 -----~~l~~~~~~~i~l-~~~~~~~~~~v~Vt~~~A-~-H~pG~~~~Sv~fl~e~~~~~vlyTGD~r~~ 124 (403)
.....-.+ .+.+ .+.+....+|.+++++.+ | |+|| +++|+++. .+++++||.-+.
T Consensus 252 ~~~~~~~~~~~~P-~~~~~~dg~~l~lgg~~l~vi~tPG~Htpg----~i~~~~p~--~~vLftGD~~~~ 314 (668)
T 2yhe_A 252 TTATNATNTLVAP-NVLIEKPYERHTVDGVELEFQLTLGSEAPS----DMNIYLPQ--FKVLNTADNAPP 314 (668)
Confidence 00000000 0000 011122337788888877 6 9999 99988754 469999998764
No 70
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=98.11 E-value=7.1e-07 Score=85.75 Aligned_cols=46 Identities=24% Similarity=0.223 Sum_probs=37.3
Q ss_pred CCeEEEcCCCC---------------CccEEEEcCCchhhhCCcccc---CCCCcEEeCHhhHh
Q 040718 3 KGLISVDRWTE---------------GSQVYFLTHLHSDHTQGLSSA---WARGPLFCSRLTAK 48 (403)
Q Consensus 3 ~~~i~VD~f~~---------------~i~aifLTH~H~DHi~GL~~~---~~~~pIy~s~~T~~ 48 (403)
+..|+||+... .+++|||||.|.||++|+..+ +++.+||+++.+.+
T Consensus 42 ~~~iLiD~G~~~~~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~~~~~~v~~~~~~~~ 105 (284)
T 2p4z_A 42 NKEIVVDTGQSENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERNPEVKIYTHKEILN 105 (284)
T ss_dssp TEEEEECCCSSTHHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHCTTCEEEEEGGGGS
T ss_pred CeEEEEeCCCCHHHHHHHHHcCCChhhCCEEEECCCCchhhccHHHHHHHcCCCceecCHHHHH
Confidence 45689998531 368999999999999999875 36789999998864
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=96.64 E-value=0.00068 Score=64.85 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=28.1
Q ss_pred cEEEEcCCchhhhCCccccCCCCcEEeCHhhH
Q 040718 16 QVYFLTHLHSDHTQGLSSAWARGPLFCSRLTA 47 (403)
Q Consensus 16 ~aifLTH~H~DHi~GL~~~~~~~pIy~s~~T~ 47 (403)
++|+|||.|.||++|+..+ ++.+||+++.+.
T Consensus 63 ~~IvlTH~H~DH~ggl~~l-~~~~v~~~~~~~ 93 (267)
T 3h3e_A 63 KDVLISHGHYDHAGGLLYL-SGKRVWLRKEAL 93 (267)
T ss_dssp SEEECSCSCHHHHGGGGGC-CSCEEEEEGGGG
T ss_pred CEEEECCCChhhhCCHHHh-cCCEEEECHHHH
Confidence 8999999999999999986 789999998764
No 72
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=68.80 E-value=5.3 Score=36.34 Aligned_cols=46 Identities=4% Similarity=-0.039 Sum_probs=37.0
Q ss_pred cCCCCHHHHHHHHHHhCCCEEEEccCCCCcccChhhHHHHHHhhcCCCcc
Q 040718 286 SDHSCFTEIEEFLNLVQPSNIRGIVSSSSCYVDPLYYFGRLCRANQPPLR 335 (403)
Q Consensus 286 SdHss~~EL~~fV~~~~P~~Vi~tv~~s~~~~~~~~~f~~~~~~~~~~~~ 335 (403)
..|.+.+|..++++.++|+.++|+|-.. .++ +.|.+.++..|+..+
T Consensus 185 ~~h~~~~ea~~~~~~l~~k~vip~H~~~---~~~-~~~~~~l~~~gi~v~ 230 (235)
T 3kl7_A 185 PYTMTVSQAAKAARMFSPKILYPYHYGD---TKI-GELKDALKDSGIDVR 230 (235)
T ss_dssp TTSCCHHHHHHHHHHHCCSEEEEESCTT---CCT-THHHHHTTTSCCEEC
T ss_pred CcccCHHHHHHHHHHcCCCEEEEEcCCC---CCH-HHHHHHHhhCCCEEE
Confidence 4699999999999999999999999875 455 668887776665433
No 73
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=52.47 E-value=22 Score=32.52 Aligned_cols=50 Identities=8% Similarity=-0.039 Sum_probs=39.5
Q ss_pred cCCCCHHHHHHHHHHhCCCEEEEccCCCCc-ccChhhHHHHHHhhcCCCcc
Q 040718 286 SDHSCFTEIEEFLNLVQPSNIRGIVSSSSC-YVDPLYYFGRLCRANQPPLR 335 (403)
Q Consensus 286 SdHss~~EL~~fV~~~~P~~Vi~tv~~s~~-~~~~~~~f~~~~~~~~~~~~ 335 (403)
.-|.+-+|..++++.++|+.++|+|-+... ...+.+.|.+.+...++..+
T Consensus 202 ~~hm~~~ea~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l~~~~~~~g~~~~ 252 (264)
T 3rpc_A 202 SIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKFIKGNNIESH 252 (264)
T ss_dssp CSSCCHHHHHHHHHHCTTSEEEEESCSSSTTBCSCHHHHHHHHHHTTCTTT
T ss_pred CcccCHHHHHHHHHhCCcCeEEEEccccccccccCHHHHHHHHHHcCCCCc
Confidence 359999999999999999999999987532 22344778888888877544
No 74
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=50.43 E-value=13 Score=33.40 Aligned_cols=29 Identities=14% Similarity=0.055 Sum_probs=26.1
Q ss_pred cCCCCHHHHHHHHHHhCCCEEEEccCCCC
Q 040718 286 SDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314 (403)
Q Consensus 286 SdHss~~EL~~fV~~~~P~~Vi~tv~~s~ 314 (403)
..|.+.+|..++++.++|+.|+|+|-+..
T Consensus 149 ~~h~~~~~a~~~~~~~~~k~vi~~H~~~~ 177 (220)
T 1vjn_A 149 TYTIGPKEAKEVADLLNAKVIIPMHYKTK 177 (220)
T ss_dssp SSSCCHHHHHHHHHHTTCSEEEEESCCCS
T ss_pred cCcCCHHHHHHHHHhcCCCEEEEEecccc
Confidence 35999999999999999999999998753
No 75
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=35.21 E-value=26 Score=32.55 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=27.9
Q ss_pred eccCCCCHHHHHHHHHHhCCCEEEEccCCCC
Q 040718 284 PYSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314 (403)
Q Consensus 284 pySdHss~~EL~~fV~~~~P~~Vi~tv~~s~ 314 (403)
+...|++++|..++++.++|+++++||-+..
T Consensus 236 ~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~ 266 (293)
T 3md7_A 236 PHPSHFSLGEALEWIEKLSPKRAILTHMHVP 266 (293)
T ss_dssp CBTTBCCHHHHHHHHHHHCCSEEEEESBCTT
T ss_pred CCCCCCCHHHHHHHHHHcCCCEEEEECCCCC
Confidence 4577999999999999999999999998744
No 76
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=34.54 E-value=50 Score=29.78 Aligned_cols=27 Identities=11% Similarity=-0.007 Sum_probs=25.3
Q ss_pred CCCHHHHHHHHHHhCCCEEEEccCCCC
Q 040718 288 HSCFTEIEEFLNLVQPSNIRGIVSSSS 314 (403)
Q Consensus 288 Hss~~EL~~fV~~~~P~~Vi~tv~~s~ 314 (403)
|++++|..++++.++|++++++|-+..
T Consensus 213 H~~~~~a~~~~~~~~~~~lil~H~~~~ 239 (268)
T 1zkp_A 213 HMNSTEVASIAKDANVKELLLTHLPHT 239 (268)
T ss_dssp CCBHHHHHHHHHHTTCSEEEEESBCSS
T ss_pred CCCHHHHHHHHHHcCCCEEEEECCCCC
Confidence 999999999999999999999998754
No 77
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=30.14 E-value=57 Score=31.64 Aligned_cols=42 Identities=10% Similarity=-0.012 Sum_probs=33.1
Q ss_pred cCCCCHHHHHHHHHHhCCCEEEEccCCCC--cccChhhHHHHHHh
Q 040718 286 SDHSCFTEIEEFLNLVQPSNIRGIVSSSS--CYVDPLYYFGRLCR 328 (403)
Q Consensus 286 SdHss~~EL~~fV~~~~P~~Vi~tv~~s~--~~~~~~~~f~~~~~ 328 (403)
..|++..|..++++.++|+.|+++|.... ...++ +.|..+++
T Consensus 282 ~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~-~e~~~~~~ 325 (379)
T 3bv6_A 282 TDKMTSSDVLRAAESLDCQVVVPFHHDIWANFQNDP-REIEVLWN 325 (379)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTTSBGGGCCCT-HHHHHHHH
T ss_pred cccCCHHHHHHHHHHcCCCEEEEEeecccccccCCH-HHHHHHHH
Confidence 34999999999999999999999997643 23444 55777766
No 78
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=29.19 E-value=61 Score=31.01 Aligned_cols=43 Identities=9% Similarity=0.023 Sum_probs=33.2
Q ss_pred cCCCCHHHHHHHHHHhCCCEEEEccCCCC--cccChhhHHHHHHhh
Q 040718 286 SDHSCFTEIEEFLNLVQPSNIRGIVSSSS--CYVDPLYYFGRLCRA 329 (403)
Q Consensus 286 SdHss~~EL~~fV~~~~P~~Vi~tv~~s~--~~~~~~~~f~~~~~~ 329 (403)
+.|++..|..++++.++|+.|+++|.... ...++ +.|...++.
T Consensus 257 ~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~-~e~~~~~~~ 301 (360)
T 2wyl_A 257 TDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADP-QEIRVLWEM 301 (360)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTTTBGGGCCCT-HHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhCCCEEEEEeeccccccCCCH-HHHHHHHHh
Confidence 45999999999999999999999997653 22444 446666653
No 79
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=29.16 E-value=30 Score=31.28 Aligned_cols=27 Identities=7% Similarity=0.112 Sum_probs=25.3
Q ss_pred cCCCCHHHHHHHHHHhCCCEEEEccCC
Q 040718 286 SDHSCFTEIEEFLNLVQPSNIRGIVSS 312 (403)
Q Consensus 286 SdHss~~EL~~fV~~~~P~~Vi~tv~~ 312 (403)
..|++++|..++++.++|++++++|-+
T Consensus 198 ~~H~~~~~a~~~~~~~~~k~lil~H~s 224 (258)
T 3g1p_A 198 RNHCDLNTVLALNQVIRSPRVILTHIS 224 (258)
T ss_dssp SSSCBHHHHHHHHHHHCCSCEEEESCC
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEECcc
Confidence 469999999999999999999999976
No 80
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=28.05 E-value=83 Score=29.09 Aligned_cols=30 Identities=10% Similarity=-0.120 Sum_probs=26.7
Q ss_pred ccCCCCHHHHHHHHHHhCCCEEEEccCCCC
Q 040718 285 YSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314 (403)
Q Consensus 285 ySdHss~~EL~~fV~~~~P~~Vi~tv~~s~ 314 (403)
-..|++.+|..++.+..+|++++.||-+..
T Consensus 244 ~~~H~t~~~a~~~a~~~~~~~lil~H~s~~ 273 (320)
T 1y44_A 244 DYYHSTTEQAAVTAKEARAKQLILTHISAR 273 (320)
T ss_dssp HTTCCBHHHHHHHHHHHTCSEEEEECBCTT
T ss_pred hcCCCCHHHHHHHHHHcCCCEEEEEeEcCC
Confidence 355999999999999999999999998753
No 81
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=25.08 E-value=46 Score=29.96 Aligned_cols=28 Identities=14% Similarity=0.139 Sum_probs=25.3
Q ss_pred cCCCCHHHHHHHHHHhCCCEEEEccCCC
Q 040718 286 SDHSCFTEIEEFLNLVQPSNIRGIVSSS 313 (403)
Q Consensus 286 SdHss~~EL~~fV~~~~P~~Vi~tv~~s 313 (403)
..|++.+|+.++++.+++++++.||-+.
T Consensus 220 ~~H~t~~~a~~~~~~~~~~~lvl~H~~~ 247 (280)
T 2e7y_A 220 KNHAAIDEVMESVKAAGVKKVILYHIST 247 (280)
T ss_dssp -CCCBHHHHHHHHHHHTCCEEEEESCCG
T ss_pred cCCCCHHHHHHHHHHcCCCEEEEEeecC
Confidence 4699999999999999999999999874
No 82
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=21.52 E-value=57 Score=29.90 Aligned_cols=30 Identities=13% Similarity=-0.020 Sum_probs=26.5
Q ss_pred ccCCCCHHHHHHHHHHhCCCEEEEccCCCC
Q 040718 285 YSDHSCFTEIEEFLNLVQPSNIRGIVSSSS 314 (403)
Q Consensus 285 ySdHss~~EL~~fV~~~~P~~Vi~tv~~s~ 314 (403)
-..|++.+|..++.+..++++++.||-+..
T Consensus 246 ~~~H~t~~~a~~~a~~~~~~~lvl~H~s~~ 275 (306)
T 2cbn_A 246 SRGHSSTRQAATLAREAGVGKLIITHVSSR 275 (306)
T ss_dssp HTTCCBHHHHHHHHHHHTCSEEEEECBCTT
T ss_pred hcCCCCHHHHHHHHHHcCCcEEEEEeecCC
Confidence 345999999999999999999999998743
Done!