BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040730
ILVSNSISPMSPSLGNQILGTKSLVKVPISCPCIDGIRHSKSTTNNVRPADTIDSILNGF
GGLVSAEQINSTSELSHPVNDWTKLMIMLPCTCFNNGNNGVTSIYKSYVVQWGESPSSVG
SKFGVTMAELVATNGLSQSVVETF

High Scoring Gene Products

Symbol, full name Information P value
LYP2
LysM-containing receptor protein 2
protein from Arabidopsis thaliana 4.6e-23
LYM3
lysin-motif (LysM) domain protein 3
protein from Arabidopsis thaliana 3.4e-22
LYP1
AT2G17120
protein from Arabidopsis thaliana 8.8e-10
CEBIP
Chitin elicitor-binding protein
protein from Oryza sativa Japonica Group 4.2e-09
LYK2
LysM-containing receptor-like kinase 2
protein from Arabidopsis thaliana 8.4e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040730
        (144 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2201143 - symbol:LYP2 "LysM-containing recepto...   268  4.6e-23   1
TAIR|locus:2204720 - symbol:LYM3 "lysin-motif (LysM) doma...   261  3.4e-22   1
TAIR|locus:2827686 - symbol:LYP1 "LysM-containing recepto...   147  8.8e-10   1
UNIPROTKB|Q8H8C7 - symbol:CEBIP "Chitin elicitor-binding ...   141  4.2e-09   1
TAIR|locus:2082359 - symbol:LYK2 "LysM-containing recepto...   105  8.4e-05   1


>TAIR|locus:2201143 [details] [associations]
            symbol:LYP2 "LysM-containing receptor protein 2"
            species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma membrane"
            evidence=ISM;IDA] [GO:0016998 "cell wall macromolecule catabolic
            process" evidence=IEA;ISS] [GO:0031225 "anchored to membrane"
            evidence=TAS] [GO:0046658 "anchored to plasma membrane"
            evidence=IDA] [GO:0006955 "immune response" evidence=IMP]
            [GO:0042834 "peptidoglycan binding" evidence=IDA] [GO:0009909
            "regulation of flower development" evidence=RCA] [GO:0016570
            "histone modification" evidence=RCA] [GO:0048449 "floral organ
            formation" evidence=RCA] InterPro:IPR002482 InterPro:IPR018392
            Pfam:PF01476 SMART:SM00257 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005576 GO:GO:0006955 GO:GO:0006952 GO:GO:0042834
            GO:GO:0046658 GO:GO:0016998 EMBL:AC013482 EMBL:AY057542
            IPI:IPI00535769 IPI:IPI00539017 PIR:B86352 RefSeq:NP_564153.1
            RefSeq:NP_849697.1 UniGene:At.25611 UniGene:At.48217
            ProteinModelPortal:Q93ZH0 SMR:Q93ZH0 STRING:Q93ZH0 PaxDb:Q93ZH0
            PRIDE:Q93ZH0 EnsemblPlants:AT1G21880.2 GeneID:838790
            KEGG:ath:AT1G21880 TAIR:At1g21880 eggNOG:NOG305960
            HOGENOM:HOG000083326 InParanoid:Q93ZH0 OMA:SAGCNVT PhylomeDB:Q93ZH0
            ProtClustDB:CLSN2714457 Genevestigator:Q93ZH0 GermOnline:AT1G21880
            Uniprot:Q93ZH0
        Length = 416

 Score = 268 (99.4 bits), Expect = 4.6e-23, P = 4.6e-23
 Identities = 54/139 (38%), Positives = 87/139 (62%)

Query:     1 ILVSNSISPMSPSLGNQILGTKSLVKVPISCPCIDGIRHSKSTTNNVRPADTIDSILNG- 59
             IL++N+I    P + N IL +K  +K+PI+C C+DGIR S ST    RP+D + SI +  
Sbjct:    68 ILLANAIDISYPDVENHILPSKLFLKIPITCSCVDGIRKSVSTHYKTRPSDNLGSIADSV 127

Query:    60 FGGLVSAEQINSTSELSHP--VNDWTKLMIMLPCTCFNNGNNGVTSIYKSYVVQWGESPS 117
             +GGLVSAEQI   + ++ P  ++  T L+I LPC CFN  +N + ++Y SYVV+  ++  
Sbjct:   128 YGGLVSAEQIQEANSVNDPSLLDVGTSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTLV 187

Query:   118 SVGSKFGVTMAELVATNGL 136
              +  ++  T+ +L+  N +
Sbjct:   188 GIARRYSTTITDLMNVNAM 206


>TAIR|locus:2204720 [details] [associations]
            symbol:LYM3 "lysin-motif (LysM) domain protein 3"
            species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma membrane"
            evidence=ISM;IDA] [GO:0016998 "cell wall macromolecule catabolic
            process" evidence=IEA;ISS] [GO:0031225 "anchored to membrane"
            evidence=TAS] [GO:0046658 "anchored to plasma membrane"
            evidence=IDA] [GO:0006955 "immune response" evidence=IMP]
            [GO:0042834 "peptidoglycan binding" evidence=IDA] [GO:0009664
            "plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
            wall modification" evidence=RCA] InterPro:IPR002482
            InterPro:IPR018392 Pfam:PF01476 SMART:SM00257 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006955 GO:GO:0006952 EMBL:AC010704
            GO:GO:0042834 GO:GO:0046658 GO:GO:0016998 HOGENOM:HOG000083326
            ProtClustDB:CLSN2714457 EMBL:BT010885 EMBL:AK176769 IPI:IPI00520912
            PIR:H96805 RefSeq:NP_177886.2 UniGene:At.24354
            ProteinModelPortal:Q6NPN4 SMR:Q6NPN4 PaxDb:Q6NPN4 PRIDE:Q6NPN4
            EnsemblPlants:AT1G77630.1 GeneID:844098 KEGG:ath:AT1G77630
            TAIR:At1g77630 eggNOG:NOG309651 InParanoid:Q6NPN4 OMA:YCEPASI
            PhylomeDB:Q6NPN4 Genevestigator:Q6NPN4 GermOnline:AT1G77630
            Uniprot:Q6NPN4
        Length = 423

 Score = 261 (96.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 56/140 (40%), Positives = 87/140 (62%)

Query:     1 ILVSNSISPMSPSLGNQILGTKSLVKVPISCPCIDGIRHSKSTTNNVRPADTIDSILNG- 59
             +L+SNSI    P + N +L  K  +K+PI+C C+DGIR S ST    R +DT+ SI +  
Sbjct:    65 MLLSNSIDISYPDVENHVLPAKLFLKIPITCSCVDGIRKSLSTHYKTRTSDTLGSIADSV 124

Query:    60 FGGLVSAEQI---NSTSELSHPVNDWTKLMIMLPCTCFNNGNNGVTSIYKSYVVQWGESP 116
             +GGLVS EQI   NS ++LS  ++  TKL+I LPC CFN  +  + ++Y SYVV+  ++ 
Sbjct:   125 YGGLVSPEQIQVANSETDLS-VLDVGTKLVIPLPCACFNGTDESLPALYLSYVVRGIDTM 183

Query:   117 SSVGSKFGVTMAELVATNGL 136
             + +  +F  ++ +L   N +
Sbjct:   184 AGIAKRFSTSVTDLTNVNAM 203


>TAIR|locus:2827686 [details] [associations]
            symbol:LYP1 "LysM-containing receptor protein 1"
            species:3702 "Arabidopsis thaliana" [GO:0016998 "cell wall
            macromolecule catabolic process" evidence=IEA;ISS] [GO:0031225
            "anchored to membrane" evidence=TAS] [GO:0046658 "anchored to
            plasma membrane" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0009627
            "systemic acquired resistance" evidence=RCA] [GO:0034976 "response
            to endoplasmic reticulum stress" evidence=RCA] [GO:0008061 "chitin
            binding" evidence=IDA] InterPro:IPR002482 InterPro:IPR018392
            Pfam:PF01476 SMART:SM00257 GO:GO:0009506 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0008061 GO:GO:0046658
            eggNOG:NOG329912 HOGENOM:HOG000239699 GO:GO:0016998
            UniGene:At.12294 UniGene:At.48484 EMBL:AF428464 EMBL:AY056221
            EMBL:AY125560 EMBL:AY088373 IPI:IPI00521359 PIR:C84548
            RefSeq:NP_565406.1 ProteinModelPortal:O23006 SMR:O23006
            PaxDb:O23006 PRIDE:O23006 EnsemblPlants:AT2G17120.1 GeneID:816217
            KEGG:ath:AT2G17120 TAIR:At2g17120 InParanoid:O23006 OMA:DVPLRAC
            PhylomeDB:O23006 ProtClustDB:CLSN2715733 Genevestigator:O23006
            GermOnline:AT2G17120 Uniprot:O23006
        Length = 350

 Score = 147 (56.8 bits), Expect = 8.8e-10, P = 8.8e-10
 Identities = 40/140 (28%), Positives = 73/140 (52%)

Query:     1 ILVSNSISPMSPSLGNQILGTKSLVKVPISCPCIDGIRHS-KSTTNNVRPADTIDSILNG 59
             IL +N++ P++ S  +Q +    +V+VPI C C +G   S +     ++  D +  +   
Sbjct:    67 ILGANNL-PLNTSR-DQRVNPNQVVRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVATE 124

Query:    60 -FGGLVSAEQINSTSELSHP--VNDWTKLMIMLPCTCFNNGNNGVTSIYKSYVVQWGESP 116
              FGGLV+ E+I+  +++  P  +    K  I LPC+C  +  NG   ++ ++VV+ G S 
Sbjct:   125 IFGGLVTYEKISEVNKIPDPNKIEIGQKFWIPLPCSC--DKLNGEDVVHYAHVVKLGSSL 182

Query:   117 SSVGSKFGVTMAELVATNGL 136
               + ++FG     L   NG+
Sbjct:   183 GEIAAQFGTDNTTLAQLNGI 202


>UNIPROTKB|Q8H8C7 [details] [associations]
            symbol:CEBIP "Chitin elicitor-binding protein"
            species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
            binding" evidence=IPI] [GO:0043621 "protein self-association"
            evidence=IDA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
            SMART:SM00257 GO:GO:0016021 GO:GO:0005886 GO:GO:0006952
            EMBL:DP000009 EMBL:AP008209 GO:GO:0043621 GO:GO:0008061
            EMBL:CM000146 EMBL:AB206975 EMBL:AC099399 EMBL:AK073032
            RefSeq:NP_001048875.1 UniGene:Os.11983 ProteinModelPortal:Q8H8C7
            STRING:Q8H8C7 EnsemblPlants:LOC_Os03g04110.1 GeneID:4331523
            KEGG:dosa:Os03t0133400-01 KEGG:osa:4331523 Gramene:Q8H8C7
            eggNOG:NOG329912 HOGENOM:HOG000239699 KO:K13473 OMA:LRIPLPC
            ProtClustDB:CLSN2693483 GO:GO:0016998 Uniprot:Q8H8C7
        Length = 356

 Score = 141 (54.7 bits), Expect = 4.2e-09, P = 4.2e-09
 Identities = 37/126 (29%), Positives = 65/126 (51%)

Query:    13 SLGNQILGTKSLVKVPISCPCIDGIRHS-KSTTNNVRPADTIDSIL-NGFGGLVSAEQIN 70
             +L +  +   S VK+P  C C   +  S +     V+P D +D+I  N F   V+ ++I 
Sbjct:    80 TLSSAPVAANSTVKIPFRCRCNGDVGQSDRLPIYVVQPQDGLDAIARNVFNAFVTYQEIA 139

Query:    71 STSELSHP--VNDWTKLMIMLPCTCFNNGNNGVTSIYKSYVVQWGESPSSVGSKFGVTMA 128
             + + +  P  +N    L I LPC+C  +   G   ++ +Y V  GE+ S++ +K+GVT +
Sbjct:   140 AANNIPDPNKINVSQTLWIPLPCSC--DKEEGSNVMHLAYSVGKGENTSAIAAKYGVTES 197

Query:   129 ELVATN 134
              L+  N
Sbjct:   198 TLLTRN 203


>TAIR|locus:2082359 [details] [associations]
            symbol:LYK2 "LysM-containing receptor-like kinase 2"
            species:3702 "Arabidopsis thaliana" [GO:0004672 "protein kinase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0016301 "kinase activity"
            evidence=ISS] [GO:0016772 "transferase activity, transferring
            phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
            InterPro:IPR001245 InterPro:IPR011009 Pfam:PF07714 PROSITE:PS00107
            PROSITE:PS50011 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF56112
            GO:GO:0004672 EMBL:AC010797 UniGene:At.41224 IPI:IPI00541235
            RefSeq:NP_186833.1 UniGene:At.41222 ProteinModelPortal:Q9SGI7
            SMR:Q9SGI7 PRIDE:Q9SGI7 EnsemblPlants:AT3G01840.1 GeneID:820047
            KEGG:ath:AT3G01840 GeneFarm:2726 TAIR:At3g01840 eggNOG:NOG303928
            HOGENOM:HOG000090363 InParanoid:Q9SGI7 OMA:FIASCYC PhylomeDB:Q9SGI7
            ProtClustDB:CLSN2685019 Genevestigator:Q9SGI7 Uniprot:Q9SGI7
        Length = 654

 Score = 105 (42.0 bits), Expect = 8.4e-05, P = 8.4e-05
 Identities = 37/138 (26%), Positives = 61/138 (44%)

Query:     6 SISPMSPSLG----NQILGTKSLVKVPISCPCIDGIRHSKSTTNNVRPADTIDSILNGFG 61
             S+S +S  LG    ++ +    L+ +PI C C +G  +  S   N    DT  S+     
Sbjct:    71 SLSDLSRHLGLDADDEYVPKGQLLLIPIECRC-NGSIYEASLIKNCVKGDTFRSVSQSLQ 129

Query:    62 GLVSAEQINSTS-ELSHP-VNDWTKLMIMLPCTCFNNGNNGVTSIYKSYVVQWGESPSSV 119
             GL +   I   +  +S   + D  KL + + C+C   G +   S   +Y V   +S SS+
Sbjct:   130 GLTTCLSIREKNPHISEDKLGDNIKLRLAIRCSCPQEGVSNA-SFLVTYPVGVRDSVSSL 188

Query:   120 GSKFGVTMAELVATNGLS 137
               +F  T   +V+ N  S
Sbjct:   189 AVRFNTTEDAIVSANNKS 206


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.129   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      144       144   0.00091  102 3  11 23  0.37    32
                                                     30  0.48    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  575 (61 KB)
  Total size of DFA:  133 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.58u 0.14s 12.72t   Elapsed:  00:00:01
  Total cpu time:  12.58u 0.14s 12.72t   Elapsed:  00:00:01
  Start:  Sat May 11 09:07:26 2013   End:  Sat May 11 09:07:27 2013

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