BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040731
(111 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2GUZ|A Chain A, Structure Of The Tim14-tim16 Complex Of The Mitochondrial
Protein Import Motor
pdb|2GUZ|C Chain C, Structure Of The Tim14-tim16 Complex Of The Mitochondrial
Protein Import Motor
pdb|2GUZ|E Chain E, Structure Of The Tim14-tim16 Complex Of The Mitochondrial
Protein Import Motor
pdb|2GUZ|G Chain G, Structure Of The Tim14-tim16 Complex Of The Mitochondrial
Protein Import Motor
pdb|2GUZ|I Chain I, Structure Of The Tim14-tim16 Complex Of The Mitochondrial
Protein Import Motor
pdb|2GUZ|K Chain K, Structure Of The Tim14-tim16 Complex Of The Mitochondrial
Protein Import Motor
pdb|2GUZ|M Chain M, Structure Of The Tim14-tim16 Complex Of The Mitochondrial
Protein Import Motor
pdb|2GUZ|O Chain O, Structure Of The Tim14-tim16 Complex Of The Mitochondrial
Protein Import Motor
Length = 71
Score = 75.9 bits (185), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 39 FYEGGFQTTMTKREAALILGVRENA-TPDKVKEAHRRVMVANHPDAGGSHYLASKINEAK 97
F +GGF M +EA IL + EN T K+KE HR++M+ANHPD GGS +LA+KINEAK
Sbjct: 2 FLKGGFDPKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAK 61
Query: 98 DVM 100
D +
Sbjct: 62 DFL 64
>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C
Menber 5
Length = 109
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 56 ILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLAS----KINEAKDVMLGKTK 105
+LG+ +NAT D +K+++R++ + HPD + A+ +IN A ++ TK
Sbjct: 22 VLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATK 75
>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like
Domain From Homo Sapiens
Length = 71
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 22/27 (81%)
Query: 56 ILGVRENATPDKVKEAHRRVMVANHPD 82
+LGV+ NAT +++K+A+R++ + HPD
Sbjct: 11 VLGVKPNATQEELKKAYRKLALKYHPD 37
>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog
Subfamily B Member 8
Length = 92
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 22/27 (81%)
Query: 56 ILGVRENATPDKVKEAHRRVMVANHPD 82
+LGV+ +A+P+ +K+A+R++ + HPD
Sbjct: 14 VLGVQASASPEDIKKAYRKLALRWHPD 40
>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk)
pdb|2Y4T|B Chain B, Crystal Structure Of The Human Co-Chaperone P58(Ipk)
pdb|2Y4T|C Chain C, Crystal Structure Of The Human Co-Chaperone P58(Ipk)
Length = 450
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 50 KREAALILGVRENATPDKVKEAHRRVMVANHPD 82
KR+ ILGV+ NA ++ +A+R++ + HPD
Sbjct: 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPD 413
>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312
Length = 450
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 50 KREAALILGVRENATPDKVKEAHRRVMVANHPD 82
KR+ ILGV+ NA ++ +A+R++ + HPD
Sbjct: 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPD 413
>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily
B Menber 12
Length = 78
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 56 ILGVRENATPDKVKEAHRRVMVANHPD 82
ILGV A+ + +K+A+RR+ + HPD
Sbjct: 12 ILGVSRGASDEDLKKAYRRLALKFHPD 38
>pdb|2GUZ|B Chain B, Structure Of The Tim14-tim16 Complex Of The
Mitochondrial Protein Import Motor
pdb|2GUZ|D Chain D, Structure Of The Tim14-tim16 Complex Of The
Mitochondrial Protein Import Motor
pdb|2GUZ|F Chain F, Structure Of The Tim14-tim16 Complex Of The
Mitochondrial Protein Import Motor
pdb|2GUZ|H Chain H, Structure Of The Tim14-tim16 Complex Of The
Mitochondrial Protein Import Motor
pdb|2GUZ|J Chain J, Structure Of The Tim14-tim16 Complex Of The
Mitochondrial Protein Import Motor
pdb|2GUZ|L Chain L, Structure Of The Tim14-tim16 Complex Of The
Mitochondrial Protein Import Motor
pdb|2GUZ|N Chain N, Structure Of The Tim14-tim16 Complex Of The
Mitochondrial Protein Import Motor
pdb|2GUZ|P Chain P, Structure Of The Tim14-tim16 Complex Of The
Mitochondrial Protein Import Motor
Length = 65
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 48 MTKREAALILGVRE---NATPDKVKEAHRRVMVANHPDAGGSHYLASKI 93
MT E+ IL + E + DK+ + N + GGS YL SK+
Sbjct: 1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKV 49
>pdb|2YS8|A Chain A, Solution Structure Of The Dnaj-Like Domain From Human Ras-
Associated Protein Rap1
Length = 90
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 56 ILGVRENATPDKVKEAHRRVMVANHPD---AGGSHYLASKINEAKDVMLGKTKGSGSA 110
+LGV+ A+ D+V +A+R++ V HPD A GS + A+ +L K S+
Sbjct: 32 MLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGPSS 89
>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans
Length = 73
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 22/27 (81%)
Query: 56 ILGVRENATPDKVKEAHRRVMVANHPD 82
+LGV+ +A+ +++K+A+R++ + HPD
Sbjct: 13 VLGVKPDASDNELKKAYRKMALKFHPD 39
>pdb|1FAF|A Chain A, Nmr Structure Of The N-Terminal J Domain Of Murine
Polyomavirus T Antigens
Length = 79
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 67 KVKEAHRRVMVANHPDAGGSHYLASKIN 94
++++A+++ + HPD GGSH L ++N
Sbjct: 29 RMQQAYKQQSLLLHPDKGGSHALMQELN 56
>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr
Length = 77
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 57 LGVRENATPDKVKEAHRRVMVANHPDAG---GSHYLASKINEAKDVM 100
LG+ A+ +++K A+RR + HPD G+ +I EA DV+
Sbjct: 9 LGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVL 55
>pdb|1XI5|J Chain J, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|K Chain K, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|L Chain L, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|M Chain M, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|N Chain N, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|O Chain O, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|P Chain P, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|Q Chain Q, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|R Chain R, Clathrin D6 Coat With Auxilin J-Domain
Length = 114
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 57 LGVRENATPDKVKEAHRRVMVANHPD-AGGSHY 88
+G+ + TP++VK+ +R+ ++ HPD A G Y
Sbjct: 55 VGMADLVTPEQVKKVYRKAVLVVHPDKATGQPY 87
>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a
Length = 99
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 56 ILGVRENATPDKVKEAHRRVMVANHPD 82
IL V +A+ D +K+A+RR + HPD
Sbjct: 7 ILDVPRSASADDIKKAYRRKALQWHPD 33
>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli
N-Terminal Fragment (Residues 1-104) Of The Molecular
Chaperone Dnaj, Nmr, 20 Structures
Length = 103
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 50 KREAALILGVRENATPDKVKEAHRRVMVANHPD 82
K++ ILGV + A ++++A++R+ + HPD
Sbjct: 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPD 34
>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The
Escherichia Coli N-Terminal Fragment (Residues 2-108)
Of The Molecular Chaperone Dnaj, 20 Structures
Length = 107
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 50 KREAALILGVRENATPDKVKEAHRRVMVANHPD 82
K++ ILGV + A ++++A++R+ + HPD
Sbjct: 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPD 34
>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli
N-Terminal Fragment (Residues 1-78) Of The Molecular
Chaperone Dnaj, Nmr, 20 Structures
Length = 77
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 56 ILGVRENATPDKVKEAHRRVMVANHPD 82
ILGV + A ++++A++R+ + HPD
Sbjct: 8 ILGVSKTAEEREIRKAYKRLAMKYHPD 34
>pdb|1NZ6|A Chain A, Crystal Structure Of Auxilin J-Domain
pdb|1NZ6|B Chain B, Crystal Structure Of Auxilin J-Domain
Length = 101
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 57 LGVRENATPDKVKEAHRRVMVANHPD-AGGSHY 88
+G + TP++VK+ +R+ ++ HPD A G Y
Sbjct: 42 VGXADLVTPEQVKKVYRKAVLVVHPDKATGQPY 74
>pdb|1N4C|A Chain A, Nmr Structure Of The J-Domain And Clathrin Substrate
Binding Domain Of Bovine Auxilin
Length = 182
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 57 LGVRENATPDKVKEAHRRVMVANHPD-AGGSHY 88
+G+ + TP++VK+ +R+ ++ HPD A G Y
Sbjct: 123 VGMADLVTPEQVKKVYRKAVLVVHPDKATGQPY 155
>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog,
Human Tid1 Protein
Length = 79
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 56 ILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLA----SKINEAKDVMLGKTK 105
ILGV NA+ ++K+A+ ++ HPD A S++ EA +V+ + K
Sbjct: 12 ILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVK 65
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5
Length = 780
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 56 ILGVRENATPDKVKEAHRRVMVANHPDAG----GSHYLASKINEAKDVM 100
+LGV + A+ ++++A +++ + HPD +H KIN A +V+
Sbjct: 26 LLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVL 74
>pdb|3UM3|A Chain A, Crystal Structure Of The Brox Bro1 Domain In Complex With
The C- Terminal Tail Of Chmp4b
Length = 411
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 43 GFQTTMTKREAALILGVRENATPDKVKEAHRRVMVA 78
GF + + A L +EN T D+ KE HR + +A
Sbjct: 115 GFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIA 150
>pdb|3UM1|A Chain A, Crystal Structure Of The Brox Bro1 Domain In Complex With
The C- Terminal Tail Of Chmp5
pdb|3UM1|D Chain D, Crystal Structure Of The Brox Bro1 Domain In Complex With
The C- Terminal Tail Of Chmp5
pdb|3UM2|A Chain A, Crystal Structure Of The Brox Bro1 Domain In Complex With
The C- Terminal Tail Of Chmp5
pdb|3UM2|D Chain D, Crystal Structure Of The Brox Bro1 Domain In Complex With
The C- Terminal Tail Of Chmp5
Length = 376
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 43 GFQTTMTKREAALILGVRENATPDKVKEAHRRVMVA 78
GF + + A L +EN T D+ KE HR + +A
Sbjct: 114 GFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIA 149
>pdb|3R9M|A Chain A, Crystal Structure Of The Brox Bro1 Domain
Length = 376
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 43 GFQTTMTKREAALILGVRENATPDKVKEAHRRVMVA 78
GF + + A L +EN T D+ KE HR + +A
Sbjct: 117 GFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIA 152
>pdb|3ULY|A Chain A, Crystal Structure Of Brox Bro1 Domain In Complex With The
C-Terminal Tails Of Chmp5
pdb|3UM0|A Chain A, Crystal Structure Of The Brox Bro1 Domain In Complex With
The C- Terminal Tail Of Chmp5
Length = 410
Score = 26.9 bits (58), Expect = 3.1, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 43 GFQTTMTKREAALILGVRENATPDKVKEAHRRVMVA 78
GF + + A L +EN T D+ KE HR + +A
Sbjct: 114 GFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIA 149
>pdb|3ZXP|A Chain A, Structural And Functional Analyses Of The Bro1 Domain
Protein Brox
pdb|3ZXP|B Chain B, Structural And Functional Analyses Of The Bro1 Domain
Protein Brox
pdb|3ZXP|C Chain C, Structural And Functional Analyses Of The Bro1 Domain
Protein Brox
Length = 407
Score = 26.9 bits (58), Expect = 3.1, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 43 GFQTTMTKREAALILGVRENATPDKVKEAHRRVMVA 78
GF + + A L +EN T D+ KE HR + +A
Sbjct: 121 GFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIA 156
>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4
Length = 155
Score = 26.6 bits (57), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEA 96
M K++ ILG +A +K+ ++++++ HPD + A + E
Sbjct: 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEEC 55
>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5
pdb|3APQ|B Chain B, Crystal Structure Of J-Trx1 Fragment Of Erdj5
Length = 210
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 56 ILGVRENATPDKVKEAHRRVMVANHPDAG----GSHYLASKINEAKDVM 100
+LGV + A+ ++++A +++ + HPD +H KIN A +V+
Sbjct: 7 LLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVL 55
>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily
B Menber 9
Length = 88
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 56 ILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINE 95
ILGV ++A+ ++K+A ++ + HPD S +K E
Sbjct: 12 ILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFRE 51
>pdb|2LK4|A Chain A, Structural And Mechanistic Insights Into The Interaction
Between Pat Pyk2 And Paxillin Ld Motif
Length = 135
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 43 GFQTTMTKREAALILGVR---ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAK 97
G Q + K A LI +R +NA +EA R+++ A+H A + L +++AK
Sbjct: 71 GTQKLLNKDLAELINKMRLAQQNAVTSLSEEAKRQMLTASHTLAVDAKNLLDAVDQAK 128
>pdb|2QWN|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
Length = 94
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 57 LGVRENATPDKVKEAHRRVMVANHP-DAGGSHY 88
+G+ + TP++VK+ +R+ ++ HP A G Y
Sbjct: 40 VGMADLVTPEQVKKVYRKAVLVVHPCKATGQPY 72
>pdb|2QWO|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 92
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 57 LGVRENATPDKVKEAHRRVMVANHP-DAGGSHY 88
+G+ + TP++VK+ +R+ ++ HP A G Y
Sbjct: 39 VGMADLVTPEQVKKVYRKAVLVVHPCKATGQPY 71
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.130 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,645,285
Number of Sequences: 62578
Number of extensions: 75577
Number of successful extensions: 214
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 179
Number of HSP's gapped (non-prelim): 38
length of query: 111
length of database: 14,973,337
effective HSP length: 75
effective length of query: 36
effective length of database: 10,279,987
effective search space: 370079532
effective search space used: 370079532
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)